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      <PRIMARY_ID>SRX2170016</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AB1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AB1 p18</TITLE>
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        <PRIMARY_ID>SRP089985</PRIMARY_ID>
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      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>SRS1697704</PRIMARY_ID>
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      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
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    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170017</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AB12</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AB12 p11</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
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      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>SRS1697705</PRIMARY_ID>
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      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
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  <EXPERIMENT alias="AE16" accession="SRX2170018">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170018</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AE16</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AE16 p14</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
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      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>SRS1697706</PRIMARY_ID>
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        <LIBRARY_NAME>AE16</LIBRARY_NAME>
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            <READ_INDEX>1</READ_INDEX>
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      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
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  <EXPERIMENT alias="AE17" accession="SRX2170019">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170019</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AE17</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AE17 p13</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
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    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>SRS1697707</PRIMARY_ID>
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        <LIBRARY_NAME>AE17</LIBRARY_NAME>
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            <READ_INDEX>1</READ_INDEX>
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      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
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  <EXPERIMENT alias="AE19" accession="SRX2170020">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170020</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AE19</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AE19 p17</TITLE>
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        <PRIMARY_ID>SRP089985</PRIMARY_ID>
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      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>SRS1697708</PRIMARY_ID>
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    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
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  </EXPERIMENT>
  <EXPERIMENT alias="BM109" accession="SRX2170021">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170021</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">BM109</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line BM109 p14</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
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    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>SRS1697709</PRIMARY_ID>
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    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
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      <PRIMARY_ID>SRX2170022</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">BM163</SUBMITTER_ID>
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    <TITLE>Asbestos-induced meosthelioma tumour cell line BM163 p20</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
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      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
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      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
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    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170023</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">BALB</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line: wild-type control BALB/c</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
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    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
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    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
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    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170024</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">CBA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line: wild-type control CBA</TITLE>
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        <PRIMARY_ID>SRP089985</PRIMARY_ID>
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      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>SRS1697712</PRIMARY_ID>
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    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="C57BL/6" accession="SRX2170025">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170025</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">C57BL/6</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line: wild-type control C57BL/6</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
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    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>SRS1697713</PRIMARY_ID>
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      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>C57BL/6</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="AB13" accession="SRX2170026">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170026</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AB13</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AB13 p14</TITLE>
    <STUDY_REF accession="SRP089985">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1697715">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1697715</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AB13</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="AB22" accession="SRX2170027">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170027</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AB22</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AB22 p8</TITLE>
    <STUDY_REF accession="SRP089985">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1697716">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1697716</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AB22</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="AC16" accession="SRX2170028">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170028</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AC16</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AC16 p24</TITLE>
    <STUDY_REF accession="SRP089985">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1697717">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1697717</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AC16</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="AC24" accession="SRX2170029">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170029</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AC24</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AC24 p31</TITLE>
    <STUDY_REF accession="SRP089985">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1697718">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1697718</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AC24</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="AC28" accession="SRX2170030">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170030</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AC28</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line p13</TITLE>
    <STUDY_REF accession="SRP089985">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1697719">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1697719</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AC28</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="AC29" accession="SRX2170031">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170031</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AC29</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AC29 p31</TITLE>
    <STUDY_REF accession="SRP089985">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1697720">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1697720</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AC29</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="AC31" accession="SRX2170032">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170032</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AC31</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AC31 p8</TITLE>
    <STUDY_REF accession="SRP089985">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1697721">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1697721</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AC31</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="AE3" accession="SRX2170033">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2170033</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Western Australia">AE3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Asbestos-induced mesothelioma tumour cell line AE3 p11</TITLE>
    <STUDY_REF accession="SRP089985">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP089985</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was extracted using standard isopropanol purification. Genomic DNA was fragmented using an S2 sonicator (Covaris, USA). Whole genome libraries were constructed using a NEBNext Ultra DNA Library kit (New England Biosciences, Ipswich, MA) with local modifications (specifically Ion Torrent sequencing adaptors were added) and the exome was enriched using a SureSelectXT Mouse All Exon kit (Agilent, Mulgrave, Vic, Australia) that targets 49.6 Mb of the murine genome (221,784 exons across 24,306 coding genes). Sequencing was performed using a Proton sequencer (Ion Torrent, Thermofisher Scientific) system according to manufacturer’s instructions. Two samples were pooled and sequenced on a P1 chip for 520 flows to an average depth of 42x.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1697722">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1697722</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AE3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent Proton</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
