<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX2225778" alias="Vlaspik 8dpp-1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225778</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Vlaspik 8dpp-1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Vlaspik 8 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Vlaspik' fruit peel at 8 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732453">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732453</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856085</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlaspik 8dpp-1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX2225801" alias="Vlaspik 8dpp-2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225801</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Vlaspik 8dpp-2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Vlaspik 8 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Vlaspik' fruit peel at 8 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732454">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732454</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856086</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlaspik 8dpp-2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX2225834" alias="Gy14 16dpp-2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225834</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Gy14 16dpp-2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Gy14 16 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Gy14' fruit peel at 16 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732455">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732455</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856095</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Gy14 16dpp-2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX2225835" alias="Gy14 16dpp-3">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225835</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Gy14 16dpp-3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Gy14 16 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Gy14' fruit peel at 16 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732456">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732456</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856096</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Gy14 16dpp-3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX2225836" alias="Vlaspik 8dpp-3">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225836</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Vlaspik 8dpp-3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Vlaspik 8 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Vlaspik' fruit peel at 8 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732457">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732457</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856087</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlaspik 8dpp-3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX2225840" alias="Vlaspik 16dpp-1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225840</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Vlaspik 16dpp-1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Vlaspik 16 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Vlaspik' fruit peel at 16 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732458">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732458</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856088</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlaspik 16dpp-1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX2225856" alias="Vlaspik 16dpp-2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225856</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Vlaspik 16dpp-2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Vlaspik 16 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Vlaspik' fruit peel at 16 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732459">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732459</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856089</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlaspik 16dpp-2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX2225879" alias="Vlaspik 16dpp-3">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225879</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Vlaspik 16dpp-3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Vlaspik 16 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Vlaspik' fruit peel at 16 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732460">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732460</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856090</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Vlaspik 16dpp-3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX2225899" alias="Gy14 8dpp-1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225899</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Gy14 8dpp-1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Gy14 8 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Gy14' fruit peel at 8 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732461">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732461</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856091</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Gy14 8dpp-1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX2225913" alias="Gy14 8dpp-2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225913</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Gy14 8dpp-2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Gy14 8 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Gy14' fruit peel at 8 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732462">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732462</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856092</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Gy14 8dpp-2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX2225934" alias="Gy14 8dpp-3">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225934</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Gy14 8dpp-3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Gy14 8 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Gy14' fruit peel at 8 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732463">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732463</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856093</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Gy14 8dpp-3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX2225952" alias="Gy14 16dpp-1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2225952</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB2004121">Gy14 16dpp-1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNAseq of Cucumis sativus: fruit peel cv. Gy14 16 dpp</TITLE>
    <STUDY_REF accession="SRP090949">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP090949</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA345040</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Reads are from cucumber cv. 'Gy14' fruit peel at 16 days post pollination (dpp). The reads are from one biological replicate, comprised of equal amounts of pooled RNA from two cucumbers. RNA was extracted with the Trizol method, cleaned using RNeasy cleanup kit (Qiagen), DNase treated for 15 min.  Sequencing libraries were prepared using the Illumina TruSeq Stranded mRNA Library preparation kit. After QC and quantitation all 12 libraries were combined into one pool. This pool was loaded on two lanes of an Illumina HiSeq 2500 Rapid Run flow cell (v1) and sequenced in a 50bp single end format (SE50) using Illumina Rapid SBS reagents. Base calling was performed by Illumina Real Time Analysis (RTA) v1.18.61 and output of RTA was demultiplexed using Illumina Bcl2fastq v1.8.4. Two lane files were merged.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS1732464">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1732464</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN05856094</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Gy14 16dpp-1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
