NRAS metastatic melanoma ATAC-seq [SKmel147]

SRS1957432 SAMN06294968 GSM2476339 NRAS metastatic melanoma ATAC-seq [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957433 SAMN06294967 GSM2476340 BRAF metastatic melanoma ATAC-seq [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957435 SAMN06294965 GSM2476342 Normal Human Melanocytes ChIP-H3K4me1 [NHM2] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM2 passage 8 antibodies H3K4me1 (Abcam, ab8895) SRS1957436 SAMN06294964 GSM2476343 NRAS metastatic melanoma ChIP-H3K4me1 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies H3K4me1 (Abcam, ab8895) SRS1957437 SAMN06294963 GSM2476344 BRAF metastatic melanoma ChIP-H3K4me1 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A antibodies H3K4me1 (Abcam, ab8895) SRS1957439 SAMN06294961 GSM2476346 NRAS metastatic melanoma ChIP-H3K4me1 [SKmel2] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel2 passage N/A antibodies H3K4me1 (Abcam, ab8895) SRS1957440 SAMN06294960 GSM2476347 Normal Human Melanocytes ChIP-H3K27ac [NHM1] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM1 passage 8 antibodies H3K27ac (Abcam, ab177178) SRS1957441 SAMN06294959 GSM2476348 Normal Human Melanocytes ChIP-H3K27ac [NHM2] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM2 passage 8 antibodies H3K27ac (Abcam, ab177178) SRS1957443 SAMN06294957 GSM2476350 BRAF metastatic melanoma ChIP-H3K27ac [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A antibodies H3K27ac (Abcam, ab177178) SRS1957444 SAMN06294956 GSM2476351 BRAF metastatic melanoma ChIP-H3K27ac [SKmel239] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel239 passage N/A antibodies H3K27ac (Abcam, ab177178) SRS1957445 SAMN06294955 GSM2476352 NRAS metastatic melanoma ChIP-H3K27ac [SKmel2] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel2 passage N/A antibodies H3K27ac (Abcam, ab177178) SRS1957447 SAMN06294944 GSM2476354 NRAS metastatic melanoma ChIP-MacroH2A1 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies macroH2A1 (Abcam, ab37264) SRS1957448 SAMN06294943 GSM2476355 NRAS metastatic melanoma ChIP-MacroH2A2 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies macroH2A2 (Bernstein lab, in house) SRS1957450 SAMN06294941 GSM2476357 NRAS metastatic melanoma ChIP-BRD2 JQ1 (+) [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies BRD2 (Bethyl Laboratories, A302-583A) SRS1957451 SAMN06294940 GSM2476358 NRAS metastatic melanoma ChIP-BRD4 JQ1 (-) [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies BRD4 (Bethyl Laboratories, A301-985A) SRS1957453 SAMN06294938 GSM2476360 NRAS metastatic melanoma ChIP-H3K27me3 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies H3K27me3 (EMD, 07-449) SRS1957454 SAMN06294937 GSM2476361 NRAS metastatic melanoma ChIP-MED1 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies MED1 (Bethyl Laboratories, A300-793A) SRS1957455 SAMN06294936 GSM2476362 NRAS metastatic melanoma Input-Native [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957457 SAMN06294933 GSM2476365 Normal Human Melanocytes Input-Native [NHM2] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM2 passage 8 SRS1957458 SAMN06294934 GSM2476364 Normal Human Melanocytes Input-Native [NHM1] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM1 passage 8 SRS1957459 SAMN06294926 GSM2476367 BRAF metastatic melanoma Input-Native [SKmel239] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel239 passage N/A SRS1957461 SAMN06294925 GSM2476368 NRAS metastatic melanoma Input-Native [SKmel2] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel2 passage N/A SRS1957462 SAMN06294927 GSM2476369 NRAS metastatic melanoma RNA-seq JQ1 (-) 6 hours Rep 1 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957463 SAMN06294929 GSM2476370 NRAS metastatic melanoma RNA-seq JQ1 (-) 6 hours Rep 2 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957465 SAMN06294930 GSM2476372 NRAS metastatic melanoma RNA-seq JQ1 (+) 6 hours Rep 2 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957466 SAMN06294931 GSM2476373 NRAS metastatic melanoma RNA-seq JQ1 (-) 24 hours Rep 1 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957467 SAMN06294920 GSM2476375 NRAS metastatic melanoma RNA-seq JQ1 (+) 24 hours Rep 1 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957469 SAMN06294919 GSM2476376 NRAS metastatic melanoma RNA-seq JQ1 (+) 24 hours Rep 2 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957470 SAMN06294921 GSM2476377 BRAF metastatic melanoma RNA-seq JQ1 (-) 6 hours Rep 1 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957471 SAMN06294922 GSM2476378 BRAF metastatic melanoma RNA-seq JQ1 (-) 6 hours Rep 2 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957473 SAMN06294924 GSM2476380 BRAF metastatic melanoma RNA-seq JQ1 (+) 6 hours Rep 2 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957474 SAMN06294911 GSM2476381 BRAF metastatic melanoma RNA-seq JQ1 (-) 24 hours Rep 1 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957475 SAMN06294910 GSM2476382 BRAF metastatic melanoma RNA-seq JQ1 (-) 24 hours Rep 2 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957477 SAMN06294913 GSM2476384 BRAF metastatic melanoma RNA-seq JQ1 (+) 24 hours Rep 2 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957478 SAMN06294914 GSM2476385 Normal Human Melanocytes RNA-seq JQ1 (-) 6 hours Rep 1 [NHM2] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM2 passage 8 SRS1957479 SAMN06294915 GSM2476386 Normal Human Melanocytes RNA-seq JQ1 (-) 6 hours Rep 2 [NHM2] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM2 passage 8 SRS1957481 SAMN06294945 GSM2476388 NRAS metastatic melanoma RNA-seq shSCR Rep 2 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957482 SAMN06294908 GSM2476389 NRAS metastatic melanoma RNA-seq shA2 #2 Rep 1 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957483 SAMN06294907 GSM2476390 NRAS metastatic melanoma RNA-seq shA2 #2 Rep 2 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957485 SAMN06294946 GSM2476392 BRAF metastatic melanoma RNA-seq shSCR Rep 2 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957486 SAMN06294947 GSM2476393 BRAF metastatic melanoma RNA-seq shA2 #2 Rep 1 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957487 SAMN06294948 GSM2476394 BRAF metastatic melanoma RNA-seq shA2 #2 Rep 2 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957489 SAMN06294906 GSM2476395 BRAF metastatic melanoma RNA-seq Rep1 [SKmel239] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel239 passage N/A SRS1957490 SAMN06294953 GSM2476398 NRAS metastatic melanoma RNA-seq Rep 2 [SKmel2] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel2 passage N/A SRS1957491 SAMN06294951 GSM2476397 NRAS metastatic melanoma RNA-seq Rep1 [SKmel2] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel2 passage N/A SRS1957493 SAMN06294949 GSM2476399 Normal Human Melanocytes RNA-seq Rep 1 [NHM1] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM1 passage 8 SRS1957431 SAMN06294856 GSM2476338 Normal Human Melanocytes ATAC-seq [NHM1] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM1 passage 8 SRS1957434 SAMN06294966 GSM2476341 Normal Human Melanocytes ChIP-H3K4me1 [NHM1] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM1 passage 8 antibodies H3K4me1 (Abcam, ab8895) SRS1957438 SAMN06294962 GSM2476345 BRAF metastatic melanoma ChIP-H3K4me1 [SKmel239] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel239 passage N/A antibodies H3K4me1 (Abcam, ab8895) SRS1957442 SAMN06294958 GSM2476349 NRAS metastatic melanoma ChIP-H3K27ac [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies H3K27ac (Abcam, ab177178) SRS1957446 SAMN06294954 GSM2476353 NRAS metastatic melanoma ChIP-H3K4me3 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies H3K4me3 (Abcam, ab1012) SRS1957449 SAMN06294942 GSM2476356 NRAS metastatic melanoma ChIP-BRD2 JQ1(-) [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies BRD2 (Bethyl Laboratories, A302-583A) SRS1957452 SAMN06294939 GSM2476359 NRAS metastatic melanoma ChIP-BRD4 JQ1 (+) [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies BRD4 (Bethyl Laboratories, A301-985A) SRS1957456 SAMN06294935 GSM2476363 NRAS metastatic melanoma Input-XL [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957460 SAMN06294932 GSM2476366 BRAF metastatic melanoma Input-Native [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957464 SAMN06294928 GSM2476371 NRAS metastatic melanoma RNA-seq JQ1 (+) 6 hours Rep 1 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957468 SAMN06294917 GSM2476374 NRAS metastatic melanoma RNA-seq JQ1 (-) 24 hours Rep 2 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957472 SAMN06294923 GSM2476379 BRAF metastatic melanoma RNA-seq JQ1 (+) 6 hours Rep 1 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957476 SAMN06294912 GSM2476383 BRAF metastatic melanoma RNA-seq JQ1 (+) 24 hours Rep 1 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957480 SAMN06294916 GSM2476387 NRAS metastatic melanoma RNA-seq shSCR Rep 1 [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A SRS1957484 SAMN06294909 GSM2476391 BRAF metastatic melanoma RNA-seq shSCR Rep 1 [501MEL] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line 501MEL passage N/A SRS1957488 SAMN06294952 GSM2476396 BRAF metastatic melanoma RNA-seq Rep 2 [SKmel239] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel239 passage N/A SRS1957492 SAMN06294950 GSM2476400 Normal Human Melanocytes RNA-seq Rep 2 [NHM1] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM1 passage 8 SRS2664802 SAMN07981456 GSM2842799 Normal Human Melanocytes Input-XL [NHM1] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM1 passage 8 SRS2664804 SAMN07981455 GSM2842798 Normal Human Melanocytes ChIP-BRD4 (JQ1-) [NHM1] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM1 passage 8 antibodies BRD4 (Bethyl Laboratories, A301-985A) SRS2664805 SAMN07981459 GSM2842801 NRAS metastatic melanoma ChIP-FOSL2 JQ1 (-) [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies FOSL2 (Santa Cruz SC-604) SRS2664801 SAMN07981454 GSM2842797 Normal Human Melanocytes ChIP-BRD2 (JQ1-) [NHM1] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Foreskin cell type foreskin, NHM1 passage 8 antibodies BRD2 (Bethyl Laboratories, A302-583A) SRS2664803 SAMN07981457 GSM2842800 NRAS metastatic melanoma ChIP-CTCF JQ1 (-) [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies CTCF (Millipore 07-729) SRS2664806 SAMN07981458 GSM2842802 NRAS metastatic melanoma ChIP-TEAD4 JQ1 (-) [SKmel147] 9606 Homo sapiens bioproject 369853 PRJNA369853 source_name Cell culture cell line SKmel147 passage N/A antibodies TEAD4 (Santa Cruz SC-101184)