<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="GSM2589882" accession="SRX2766224">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2766224</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2589882</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2589882: MeDIP_5mC_Control; Mus musculus; MeDIP-Seq</TITLE>
    <STUDY_REF accession="SRP105373" refname="GSE98254">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP105373</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2150312">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2150312</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2589882</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>MeDIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>5-methylcytidine antibody</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Genomic DNA was extracted and then submitted to sonication. The sonicated DNA was incubated with 5mC antibody-conjugated beads overnight. Then the beads were washed, and DNA was eluted, and quantified. The sequencing library was generated following the guide NEXTflex™ kits for DNA library prep for Illumina® sequencing</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302589882</ID>
          <LABEL>GSM2589882</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2589882</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2589883" accession="SRX2766225">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2766225</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2589883</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2589883: MeDIP_5mC_Rif1KD; Mus musculus; MeDIP-Seq</TITLE>
    <STUDY_REF accession="SRP105373" refname="GSE98254">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP105373</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2150313">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2150313</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2589883</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>MeDIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>5-methylcytidine antibody</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Genomic DNA was extracted and then submitted to sonication. The sonicated DNA was incubated with 5mC antibody-conjugated beads overnight. Then the beads were washed, and DNA was eluted, and quantified. The sequencing library was generated following the guide NEXTflex™ kits for DNA library prep for Illumina® sequencing</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302589883</ID>
          <LABEL>GSM2589883</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2589883</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
