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      <SAMPLE_DESCRIPTOR accession="SRS2378000">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378000</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715370</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715370</ID>
          <LABEL>GSM2715370</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715370</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715371" accession="SRX3029081">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029081</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715371</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715371: 48 Hour DES 56 Mock R1; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378001">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378001</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715371</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715371</ID>
          <LABEL>GSM2715371</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715371</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715372" accession="SRX3029082">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029082</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715372</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715372: 24 Hour Acala Maxxa Mock R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378002">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378002</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715372</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715372</ID>
          <LABEL>GSM2715372</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715372</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715373" accession="SRX3029083">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029083</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715373</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715373: 24 Hour DES 56 Mock R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378003">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378003</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715373</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715373</ID>
          <LABEL>GSM2715373</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715373</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715374" accession="SRX3029084">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029084</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715374</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715374: 24 Hour Acala Maxxa MS14003 R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378004">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378004</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715374</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715374</ID>
          <LABEL>GSM2715374</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715374</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715375" accession="SRX3029085">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029085</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715375</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715375: 24 Hour DES 56 MS14003 R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378005">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378005</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715375</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715375</ID>
          <LABEL>GSM2715375</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715375</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715376" accession="SRX3029086">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029086</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715376</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715376: 24 Hour DES 56 AR81009 R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378006">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378006</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715376</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715376</ID>
          <LABEL>GSM2715376</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715376</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715377" accession="SRX3029087">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029087</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715377</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715377: 24 Hour Acala Maxxa AR81009 R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378007">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378007</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715377</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715377</ID>
          <LABEL>GSM2715377</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715377</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715378" accession="SRX3029088">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029088</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715378</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715378: 48 Hour DES 56 AR81009 R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378008">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378008</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715378</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715378</ID>
          <LABEL>GSM2715378</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715378</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715379" accession="SRX3029089">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029089</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715379</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715379: 48 Hour Acala Maxxa AR81009 R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378009">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378009</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715379</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715379</ID>
          <LABEL>GSM2715379</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715379</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715380" accession="SRX3029090">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029090</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715380</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715380: 48 Hour Acala Maxxa MS14003 R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378010">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378010</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715380</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715380</ID>
          <LABEL>GSM2715380</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715380</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715381" accession="SRX3029091">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029091</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715381</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715381: 48 Hour DES 56 MS14003 R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378011">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378011</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715381</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715381</ID>
          <LABEL>GSM2715381</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715381</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715382" accession="SRX3029092">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029092</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715382</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715382: 48 Hour Acala Maxxa Mock R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378012">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378012</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715382</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715382</ID>
          <LABEL>GSM2715382</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715382</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715383" accession="SRX3029093">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029093</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715383</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715383: 48 Hour DES 56 Mock R2; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378013">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378013</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715383</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715383</ID>
          <LABEL>GSM2715383</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715383</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715384" accession="SRX3029094">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029094</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715384</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715384: 24 Hour Acala Maxxa Mock R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378014">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378014</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715384</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715384</ID>
          <LABEL>GSM2715384</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715384</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715385" accession="SRX3029095">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029095</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715385</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715385: 48 Hour Acala Maxxa Mock R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378015">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378015</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715385</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715385</ID>
          <LABEL>GSM2715385</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715385</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715386" accession="SRX3029096">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029096</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715386</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715386: 24 Hour DES 56 Mock R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378016">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378016</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715386</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715386</ID>
          <LABEL>GSM2715386</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715386</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715387" accession="SRX3029097">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029097</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715387</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715387: 48 Hour DES 56 Mock R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378017">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378017</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715387</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715387</ID>
          <LABEL>GSM2715387</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715387</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715388" accession="SRX3029098">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029098</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715388</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715388: 24 Hour Acala Maxxa MS14003 R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378018">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378018</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715388</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715388</ID>
          <LABEL>GSM2715388</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715388</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715389" accession="SRX3029099">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029099</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715389</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715389: 48 Hour Acala Maxxa MS14003 R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378020">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378020</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715389</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715389</ID>
          <LABEL>GSM2715389</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715389</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715390" accession="SRX3029100">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029100</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715390</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715390: 24 Hour DES 56 MS14003 R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378019">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378019</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715390</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715390</ID>
          <LABEL>GSM2715390</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715390</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715391" accession="SRX3029101">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029101</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715391</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715391: 48 Hour DES 56 MS14003 R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378021">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378021</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715391</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715391</ID>
          <LABEL>GSM2715391</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715391</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715392" accession="SRX3029102">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029102</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715392</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715392: 24 Hour - Acala Maxxa AR81009 R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378022">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378022</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715392</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715392</ID>
          <LABEL>GSM2715392</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715392</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715393" accession="SRX3029103">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029103</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715393</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715393: 48 Hour - Acala Maxxa AR81009 R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378024">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378024</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715393</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715393</ID>
          <LABEL>GSM2715393</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715393</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715394" accession="SRX3029104">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029104</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715394</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715394: 24 Hour - DES 56 AR81009 R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378023">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378023</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715394</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715394</ID>
          <LABEL>GSM2715394</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715394</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2715395" accession="SRX3029105">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3029105</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2715395</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2715395: 48 Hour - DES 56 AR81009 R3; Gossypium hirsutum; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP113405" refname="GSE101778">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP113405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS2378025">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2378025</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2715395</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Infected and mock-treated tissue were collected and flash frozen at 24 and 48 hours post inoculation. RNA was extracted using the Sigma tRNA kit. RNA quality was assessed on an Agilent Bioanalyzer. 5ug of total RNA was used as starting material for library construction. mRNA was isolated using the NEB magnetic mRNA isolation kit. Standard library prep protocol was followed for all samples. Library quality was assessed on an Agilent Bioanalyzer.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302715395</ID>
          <LABEL>GSM2715395</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2715395</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
