RNAseq_Epiboly_Citrine

SRS2671399 SAMN08000341 GSM2845155 RNAseq_Epiboly_Citrine_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 75% Epiboly stage embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 75% Epiboly stage embryos developmental_stage 75% Epiboly assay RNA-seq isolation_method FACS SRS2671400 SAMN08000340 GSM2845156 RNAseq_Epiboly_Citrine_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 75% Epiboly stage embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 75% Epiboly stage embryos developmental_stage 75% Epiboly assay RNA-seq isolation_method FACS SRS2671401 SAMN08000339 GSM2845157 RNAseq_Epiboly_Citriine-Cherry_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 75% Epiboly stage embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 75% Epiboly stage embryos developmental_stage 75% Epiboly assay RNA-seq isolation_method FACS SRS2671402 SAMN08000337 GSM2845159 RNAseq_Epiboly_Negatives1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 75% Epiboly stage embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 75% Epiboly stage embryos developmental_stage 75% Epiboly assay RNA-seq isolation_method FACS SRS2671403 SAMN08000338 GSM2845158 RNAseq_Epiboly_Citriine-Cherry_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 75% Epiboly stage embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 75% Epiboly stage embryos developmental_stage 75% Epiboly assay RNA-seq isolation_method FACS SRS2671404 SAMN08000335 GSM2845161 RNAseq_NCC5-6ss_Citrine_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 75% Epiboly assay RNA-seq isolation_method FACS SRS2671405 SAMN08000336 GSM2845160 RNAseq_Epiboly_Negatives2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 75% Epiboly stage embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 75% Epiboly stage embryos developmental_stage 75% Epiboly assay RNA-seq isolation_method FACS SRS2671406 SAMN08000334 GSM2845162 RNAseq_NCC5-6ss_Citrine_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay RNA-seq isolation_method FACS SRS2671407 SAMN08000333 GSM2845163 RNAseq_NCC5-6ss_Citrine-Cherry_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay RNA-seq isolation_method FACS SRS2671408 SAMN08000398 GSM2845164 RNAseq_NCC5-6ss_Citrine-Cherry_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay RNA-seq isolation_method FACS SRS2671409 SAMN08000397 GSM2845165 RNAseq_NCC5-6ss_Negatives1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 5-6ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 5-6ss embryos developmental_stage 5-6ss assay RNA-seq isolation_method FACS SRS2671410 SAMN08000396 GSM2845166 RNAseq_NCC5-6ss_Negatives2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 5-6ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 5-6ss embryos developmental_stage 5-6ss assay RNA-seq isolation_method FACS SRS2671411 SAMN08000395 GSM2845167 RNAseq_NCC14-16ss_Citrine_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 14-16ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 14-16ss embryos developmental_stage 14-16ss assay RNA-seq isolation_method FACS SRS2671412 SAMN08000392 GSM2845170 RNAseq_NCC14-16ss_Citrine-Cherry_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 14-16ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 14-16ss embryos developmental_stage 14-16ss assay RNA-seq isolation_method FACS SRS2671413 SAMN08000394 GSM2845168 RNAseq_NCC14-16ss_Citrine_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 14-16ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 14-16ss embryos developmental_stage 14-16ss assay RNA-seq isolation_method FACS SRS2671414 SAMN08000391 GSM2845171 RNAseq_NCC14-16ss_Negatives1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 14-16ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 14-16ss embryos developmental_stage 14-16ss assay RNA-seq isolation_method FACS SRS2671415 SAMN08000390 GSM2845172 RNAseq_NCC14-16ss_Negatives2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 14-16ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Cells not expressing Citrine reporter and cells not expressing Cherry reporter from 14-16ss embryos developmental_stage 14-16ss assay RNA-seq isolation_method FACS SRS2671416 SAMN08000388 GSM2845174 ChIPseq_H3K27ac_NCC5-6ss_Citrine-Cherry 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 14-16ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 14-16ss embryos developmental_stage 5-6ss assay ChIP-seq isolation_method FACS SRS2671417 SAMN08000393 GSM2845169 RNAseq_NCC14-16ss_Citrine-Cherry_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 14-16ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 14-16ss embryos developmental_stage 14-16ss assay RNA-seq isolation_method FACS SRS2671418 SAMN08000387 GSM2845175 ChIPseq_H3K27ac_NCC5-6ss_Cit_input 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay ChIP-seq isolation_method FACS SRS2671419 SAMN08000386 GSM2845176 ChIPseq_H3K27ac_NCC5-6ss_CitChe_input 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 14-16ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 14-16ss embryos developmental_stage 5-6ss assay ChIP-seq isolation_method FACS SRS2671420 SAMN08000380 GSM2845181 ATACseq_BudStage_Head_Citrine_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 1ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 1ss embryos developmental_stage 1ss assay ATAC-seq isolation_method FACS SRS2671421 SAMN08000384 GSM2845178 ATACseq_Epiboly_Citrine_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 75% Epiboly stage embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 75% Epiboly stage embryos developmental_stage 75% Epiboly assay ATAC-seq isolation_method FACS SRS2671422 SAMN08000385 GSM2845177 ATACseq_Epiboly_Citrine_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 75% Epiboly stage embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 75% Epiboly stage embryos developmental_stage 75% Epiboly assay ATAC-seq isolation_method FACS SRS2671423 SAMN08000379 GSM2845182 ATACseq_BudStage_Head_Citrine_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 1ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter expressing cells from 1ss embryos developmental_stage 1ss assay ATAC-seq isolation_method FACS SRS2671424 SAMN08000382 GSM2845179 ATACseq_Epiboly_Citrine-Cherry_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 75% Epiboly stage embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 75% Epiboly stage embryos developmental_stage 75% Epiboly assay ATAC-seq isolation_method FACS SRS2671425 SAMN08000381 GSM2845180 ATACseq_Epiboly_Citrine-Cherry_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 75% Epiboly stage embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 75% Epiboly stage embryos developmental_stage 75% Epiboly assay ATAC-seq isolation_method FACS SRS2671426 SAMN08000291 GSM2845183 ATACseq_BudStage_Head_Citrine-Cherry_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 1ss stage embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 1ss stage embryos developmental_stage 1ss assay ATAC-seq isolation_method FACS SRS2671427 SAMN08000383 GSM2845184 ATACseq_NCC_Citrine_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 1ss assay ATAC-seq isolation_method FACS SRS2671428 SAMN08000290 GSM2845185 ATACseq_NCC_Citrine_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay ATAC-seq isolation_method FACS SRS2671429 SAMN08000286 GSM2845189 ATACseq_Rx_NCC_Citrine-Cherry 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 5-6ss embryos piked with S2 cell Drosophila genomic DNA strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 5-6ss embryos piked with S2 cell Drosophila genomic DNA developmental_stage -- assay ATAC-seq Rx isolation_method FACS SRS2671430 SAMN08000288 GSM2845187 ATACseq_NCC_Citrine-Cherry_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay ATAC-seq isolation_method FACS SRS2671431 SAMN08000287 GSM2845188 ATACseq_Rx_NCC_Citrine 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos spiked with S2 cell Drosophila genomic DNA strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos spiked with S2 cell Drosophila genomic DNA developmental_stage -- assay ATAC-seq Rx isolation_method FACS SRS2671432 SAMN08000281 GSM2845194 scRNA_seq_FoxD3_Citrine_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671433 SAMN08000284 GSM2845191 BiotinChIP_FoxD3_input 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cells expressing Citrine and Cherry reporter from 5-6ss embryos strain TgBAC(foxd3-Avi-2A-Citrine)ox161; Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Cells expressing Citrine and Cherry reporter from 5-6ss embryos developmental_stage 5-6ss assay Biotin ChIP-seq isolation_method FACS SRS2671434 SAMN08000285 GSM2845190 BiotinChIP_FoxD3_ChIP 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cells expressing Citrine and Cherry reporter from 5-6ss embryos strain TgBAC(foxd3-Avi-2A-Citrine)ox161; Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Cells expressing Citrine and Cherry reporter from 5-6ss embryos developmental_stage 5-6ss assay Biotin ChIP-seq isolation_method FACS SRS2671435 SAMN08000282 GSM2845193 BiotinChIP_BirA_input 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cells expressing Citrine and Cherry reporter from 5-6ss embryos strain TgBAC(foxd3-Avi-2A-Citrine)ox161; Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Cells expressing Citrine and Cherry reporter from 5-6ss embryos developmental_stage 5-6ss assay Biotin ChIP-seq isolation_method FACS SRS2671436 SAMN08000283 GSM2845192 BiotinChIP_BirA 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cells expressing Citrine and Cherry reporter from 5-6ss embryos strain TgBAC(foxd3-Avi-2A-Citrine)ox161; Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Cells expressing Citrine and Cherry reporter from 5-6ss embryos developmental_stage 5-6ss assay Biotin ChIP-seq isolation_method FACS SRS2671437 SAMN08000289 GSM2845186 ATACseq_NCC_Citrine-Cherry_1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter and Cherry reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110; Gt(foxd3-mCherry)ct110R tissue Citrine reporter and Cherry reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay ATAC-seq isolation_method FACS SRS2671438 SAMN08000280 GSM2845195 scRNA_seq_FoxD3_Citrine_2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671439 SAMN08000279 GSM2845196 scRNA_seq_FoxD3_Citrine_3 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671440 SAMN08000275 GSM2845200 scRNA_seq_FoxD3_Citrine_7 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671441 SAMN08000278 GSM2845197 scRNA_seq_FoxD3_Citrine_4 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671442 SAMN08000277 GSM2845198 scRNA_seq_FoxD3_Citrine_5 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671443 SAMN08000276 GSM2845199 scRNA_seq_FoxD3_Citrine_6 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671444 SAMN08000274 GSM2845201 scRNA_seq_FoxD3_Citrine_8 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671445 SAMN08000273 GSM2845202 scRNA_seq_FoxD3_Citrine_9 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671446 SAMN08000271 GSM2845204 scRNA_seq_FoxD3_Citrine_11 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671447 SAMN08000272 GSM2845203 scRNA_seq_FoxD3_Citrine_10 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671448 SAMN08000270 GSM2845205 scRNA_seq_FoxD3_Citrine_12 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671449 SAMN08000374 GSM2845211 scRNA_seq_FoxD3_Citrine_18 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671450 SAMN08000376 GSM2845209 scRNA_seq_FoxD3_Citrine_16 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671451 SAMN08000269 GSM2845206 scRNA_seq_FoxD3_Citrine_13 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671452 SAMN08000378 GSM2845207 scRNA_seq_FoxD3_Citrine_14 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671453 SAMN08000373 GSM2845212 scRNA_seq_FoxD3_Citrine_19 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671454 SAMN08000372 GSM2845213 scRNA_seq_FoxD3_Citrine_20 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671455 SAMN08000328 GSM2845214 scRNA_seq_FoxD3_Citrine_21 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671456 SAMN08000375 GSM2845210 scRNA_seq_FoxD3_Citrine_17 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671457 SAMN08000377 GSM2845208 scRNA_seq_FoxD3_Citrine_15 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671458 SAMN08000327 GSM2845215 scRNA_seq_FoxD3_Citrine_22 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671459 SAMN08000326 GSM2845216 scRNA_seq_FoxD3_Citrine_23 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671460 SAMN08000323 GSM2845219 scRNA_seq_FoxD3_Citrine_26 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671461 SAMN08000321 GSM2845221 scRNA_seq_FoxD3_Citrine_28 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671462 SAMN08000325 GSM2845217 scRNA_seq_FoxD3_Citrine_24 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671463 SAMN08000324 GSM2845218 scRNA_seq_FoxD3_Citrine_25 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671464 SAMN08000319 GSM2845223 scRNA_seq_FoxD3_Citrine_30 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671465 SAMN08000320 GSM2845222 scRNA_seq_FoxD3_Citrine_29 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671466 SAMN08000317 GSM2845225 scRNA_seq_FoxD3_Citrine_32 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671467 SAMN08000322 GSM2845220 scRNA_seq_FoxD3_Citrine_27 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671468 SAMN08000318 GSM2845224 scRNA_seq_FoxD3_Citrine_31 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671469 SAMN08000316 GSM2845226 scRNA_seq_FoxD3_Citrine_33 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671470 SAMN08000314 GSM2845228 scRNA_seq_FoxD3_Citrine_35 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671471 SAMN08000315 GSM2845227 scRNA_seq_FoxD3_Citrine_34 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671472 SAMN08000313 GSM2845229 scRNA_seq_FoxD3_Citrine_36 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671473 SAMN08000312 GSM2845230 scRNA_seq_FoxD3_Citrine_37 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671474 SAMN08000309 GSM2845233 scRNA_seq_FoxD3_Citrine_40 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671475 SAMN08000310 GSM2845232 scRNA_seq_FoxD3_Citrine_39 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671476 SAMN08000311 GSM2845231 scRNA_seq_FoxD3_Citrine_38 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671477 SAMN08000307 GSM2845235 scRNA_seq_FoxD3_Citrine_42 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671478 SAMN08000308 GSM2845234 scRNA_seq_FoxD3_Citrine_41 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671479 SAMN08000306 GSM2845236 scRNA_seq_FoxD3_Citrine_43 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671480 SAMN08000305 GSM2845237 scRNA_seq_FoxD3_Citrine_44 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671481 SAMN08000303 GSM2845239 scRNA_seq_FoxD3_Citrine_46 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671482 SAMN08000304 GSM2845238 scRNA_seq_FoxD3_Citrine_45 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671483 SAMN08000301 GSM2845241 scRNA_seq_FoxD3_Citrine_48 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671484 SAMN08000371 GSM2845244 scRNA_seq_FoxD3_Citrine_51 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671485 SAMN08000299 GSM2845243 scRNA_seq_FoxD3_Citrine_50 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671486 SAMN08000300 GSM2845242 scRNA_seq_FoxD3_Citrine_49 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671487 SAMN08000302 GSM2845240 scRNA_seq_FoxD3_Citrine_47 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671488 SAMN08000370 GSM2845245 scRNA_seq_FoxD3_Citrine_52 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671489 SAMN08000368 GSM2845247 scRNA_seq_FoxD3_Citrine_54 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671490 SAMN08000369 GSM2845246 scRNA_seq_FoxD3_Citrine_53 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671491 SAMN08000363 GSM2845252 scRNA_seq_FoxD3_Citrine_59 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671492 SAMN08000361 GSM2845254 scRNA_seq_FoxD3_Citrine_61 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671493 SAMN08000362 GSM2845253 scRNA_seq_FoxD3_Citrine_60 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671494 SAMN08000365 GSM2845250 scRNA_seq_FoxD3_Citrine_57 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671495 SAMN08000366 GSM2845249 scRNA_seq_FoxD3_Citrine_56 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671496 SAMN08000367 GSM2845248 scRNA_seq_FoxD3_Citrine_55 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671497 SAMN08000360 GSM2845255 scRNA_seq_FoxD3_Citrine_62 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671498 SAMN08000364 GSM2845251 scRNA_seq_FoxD3_Citrine_58 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671499 SAMN08000359 GSM2845256 scRNA_seq_FoxD3_Citrine_63 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671500 SAMN08000358 GSM2845257 scRNA_seq_FoxD3_Citrine_64 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671501 SAMN08000357 GSM2845258 scRNA_seq_FoxD3_Citrine_65 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671502 SAMN08000353 GSM2845262 scRNA_seq_FoxD3_Citrine_69 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671503 SAMN08000354 GSM2845261 scRNA_seq_FoxD3_Citrine_68 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671504 SAMN08000350 GSM2845265 scRNA_seq_FoxD3_Citrine_72 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671505 SAMN08000355 GSM2845260 scRNA_seq_FoxD3_Citrine_67 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671506 SAMN08000352 GSM2845263 scRNA_seq_FoxD3_Citrine_70 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671507 SAMN08000347 GSM2845268 scRNA_seq_FoxD3_Citrine_75 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671508 SAMN08000346 GSM2845269 scRNA_seq_FoxD3_Citrine_76 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671509 SAMN08000343 GSM2845272 scRNA_seq_FoxD3_Citrine_79 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671510 SAMN08000349 GSM2845266 scRNA_seq_FoxD3_Citrine_73 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671511 SAMN08000351 GSM2845264 scRNA_seq_FoxD3_Citrine_71 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671512 SAMN08000348 GSM2845267 scRNA_seq_FoxD3_Citrine_74 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671513 SAMN08000344 GSM2845271 scRNA_seq_FoxD3_Citrine_78 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671514 SAMN08000345 GSM2845270 scRNA_seq_FoxD3_Citrine_77 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671515 SAMN08000389 GSM2845173 ChIPseq_H3K27ac_NCC5-6ss_Citrine 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay ChIP-seq isolation_method FACS SRS2671516 SAMN08000356 GSM2845259 scRNA_seq_FoxD3_Citrine_66 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671517 SAMN08000342 GSM2845273 scRNA_seq_FoxD3_Citrine_80 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671518 SAMN08000298 GSM2845274 scRNA_seq_FoxD3_Citrine_81 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671519 SAMN08000297 GSM2845275 scRNA_seq_FoxD3_Citrine_82 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671520 SAMN08000296 GSM2845276 scRNA_seq_FoxD3_Citrine_83 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671521 SAMN08000294 GSM2845278 scRNA_seq_FoxD3_Citrine_85 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671522 SAMN08000295 GSM2845277 scRNA_seq_FoxD3_Citrine_84 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671523 SAMN08000292 GSM2845280 scRNA_seq_FoxD3_Citrine_87 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671524 SAMN08000266 GSM2845283 scRNA_seq_FoxD3_Citrine_90 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671525 SAMN08000268 GSM2845281 scRNA_seq_FoxD3_Citrine_88 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671526 SAMN08000267 GSM2845282 scRNA_seq_FoxD3_Citrine_89 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671527 SAMN08000332 GSM2845284 scRNA_seq_FoxD3_Citrine_91 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671528 SAMN08000329 GSM2845287 scRNA_seq_FoxD3_Citrine_94 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671529 SAMN08000331 GSM2845285 scRNA_seq_FoxD3_Citrine_92 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671530 SAMN08000330 GSM2845286 scRNA_seq_FoxD3_Citrine_93 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS2671531 SAMN08000293 GSM2845279 scRNA_seq_FoxD3_Citrine_86 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Citrine reporter expressing cells from 5-6ss embryos strain Gt(foxd3-citrine)ct110 tissue Citrine reporter expressing cells from 5-6ss embryos developmental_stage 5-6ss assay scRNA-seq isolation_method FACS SRS3793630 SAMN10081726 GSM3393476 75% epiboly Input 7955 Danio rerio bioproject 417594 PRJNA417594 source_name 75% epiboly Input strain TgBAC(foxd3-Avi-2A-Citrine)ox161 x Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Embryo development stage 75% epiboly cell type Neural crest (foxd3 cells) isolation_method In vivo Biotinylated foxd3 treatment Input amplification Diagenode MicroPlex LibraryPrep assay ChIP-seq SRS3793631 SAMN10081730 GSM3393473 Control - BirA-ChIP 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Control - BirA-ChIP strain TgBAC(foxd3-Avi-2A-Citrine)ox161 x Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Embryo development stage 5-6 somites cell type Neural crest (foxd3 cells) isolation_method In vivo Biotinylated foxd3 treatment CTL ChIP amplification Diagenode MicroPlex LibraryPrep assay ChIP-seq SRS3793632 SAMN10081729 GSM3393474 Control - BirA-Input 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Control - BirA-Input strain TgBAC(foxd3-Avi-2A-Citrine)ox161 x Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Embryo development stage 5-6 somites cell type Neural crest (foxd3 cells) isolation_method In vivo Biotinylated foxd3 treatment CTL input amplification Diagenode MicroPlex LibraryPrep assay ChIP-seq SRS3793633 SAMN10081727 GSM3393475 75% epiboly ChIP 7955 Danio rerio bioproject 417594 PRJNA417594 source_name 75% epiboly ChIP strain TgBAC(foxd3-Avi-2A-Citrine)ox161 x Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Embryo development stage 75% epiboly cell type Neural crest (foxd3 cells) isolation_method In vivo Biotinylated foxd3 treatment ChIP amplification Diagenode MicroPlex LibraryPrep assay ChIP-seq SRS3793634 SAMN10081722 GSM3393479 5-6ss ChIP 7955 Danio rerio bioproject 417594 PRJNA417594 source_name 5-6ss ChIP strain TgBAC(foxd3-Avi-2A-Citrine)ox161 x Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Embryo development stage 5-6 somites cell type Neural crest (foxd3 cells) isolation_method In vivo Biotinylated foxd3 treatment ChIP amplification Diagenode MicroPlex LibraryPrep assay ChIP-seq SRS3793635 SAMN10081724 GSM3393477 1-2ss ChIP 7955 Danio rerio bioproject 417594 PRJNA417594 source_name 1-2ss ChIP strain TgBAC(foxd3-Avi-2A-Citrine)ox161 x Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Embryo development stage 1-2 somites cell type Neural crest (foxd3 cells) isolation_method In vivo Biotinylated foxd3 treatment ChIP amplification Diagenode MicroPlex LibraryPrep assay ChIP-seq SRS3793636 SAMN10081720 GSM3393480 5-6ss Input 7955 Danio rerio bioproject 417594 PRJNA417594 source_name 5-6ss Input strain TgBAC(foxd3-Avi-2A-Citrine)ox161 x Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Embryo development stage 5-6 somites cell type Neural crest (foxd3 cells) isolation_method In vivo Biotinylated foxd3 treatment Input amplification Diagenode MicroPlex LibraryPrep assay ChIP-seq SRS3793637 SAMN10081723 GSM3393478 1-2ss Input 7955 Danio rerio bioproject 417594 PRJNA417594 source_name 1-2ss Input strain TgBAC(foxd3-Avi-2A-Citrine)ox161 x Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Embryo development stage 1-2 somites cell type Neural crest (foxd3 cells) isolation_method In vivo Biotinylated foxd3 treatment Input amplification Diagenode MicroPlex LibraryPrep assay ChIP-seq SRS3793638 SAMN10081718 GSM3393482 14ss Input 7955 Danio rerio bioproject 417594 PRJNA417594 source_name 14ss Input strain TgBAC(foxd3-Avi-2A-Citrine)ox161 x Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Embryo development stage 14 somites cell type Neural crest (foxd3 cells) isolation_method In vivo Biotinylated foxd3 treatment Input amplification Diagenode MicroPlex LibraryPrep assay ChIP-seq SRS3793639 SAMN10081717 GSM3393483 foxd3over_CTL1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name foxd3over_CTL1 strain Wild-type tissue Embryo development stage 50% epiboly cell type Half embryo (intrinsic foxd3+ cells removed) isolation_method Dissecction treatment Not injected amplification NEB Next High-Fidelity 2X PCR Master Mix assay ATAC-seq SRS3793640 SAMN10081719 GSM3393481 14ss ChIP 7955 Danio rerio bioproject 417594 PRJNA417594 source_name 14ss ChIP strain TgBAC(foxd3-Avi-2A-Citrine)ox161 x Tg(ubiq:NLS-BirA-2A-Cherry)ox114 tissue Embryo development stage 14 somites cell type Neural crest (foxd3 cells) isolation_method In vivo Biotinylated foxd3 treatment ChIP amplification Diagenode MicroPlex LibraryPrep assay ChIP-seq SRS3793641 SAMN10081715 GSM3393484 foxd3over_CTL2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name foxd3over_CTL2 strain Wild-type tissue Embryo development stage 50% epiboly cell type Half embryo (intrinsic foxd3+ cells removed) isolation_method Dissecction treatment Not injected amplification NEB Next High-Fidelity 2X PCR Master Mix assay ATAC-seq SRS3793642 SAMN10081738 GSM3393485 foxd3over_CTL3 7955 Danio rerio bioproject 417594 PRJNA417594 source_name foxd3over_CTL3 strain Wild-type tissue Embryo development stage 50% epiboly cell type Half embryo (intrinsic foxd3+ cells removed) isolation_method Dissecction treatment Not injected amplification NEB Next High-Fidelity 2X PCR Master Mix assay ATAC-seq SRS3793643 SAMN10081735 GSM3393488 foxd3over_INJ3 7955 Danio rerio bioproject 417594 PRJNA417594 source_name foxd3over_INJ3 strain Wild-type tissue Embryo development stage 50% epiboly cell type Half embryo (intrinsic foxd3+ cells removed) isolation_method Dissecction treatment foxd3 mRNA inejction at 1 cell stage amplification NEB Next High-Fidelity 2X PCR Master Mix assay ATAC-seq SRS3793644 SAMN10081736 GSM3393487 foxd3over_INJ2 7955 Danio rerio bioproject 417594 PRJNA417594 source_name foxd3over_INJ2 strain Wild-type tissue Embryo development stage 50% epiboly cell type Half embryo (intrinsic foxd3+ cells removed) isolation_method Dissecction treatment foxd3 mRNA inejction at 1 cell stage amplification NEB Next High-Fidelity 2X PCR Master Mix assay ATAC-seq SRS3793645 SAMN10081737 GSM3393486 foxd3over_INJ1 7955 Danio rerio bioproject 417594 PRJNA417594 source_name foxd3over_INJ1 strain Wild-type tissue Embryo development stage 50% epiboly cell type Half embryo (intrinsic foxd3+ cells removed) isolation_method Dissecction treatment foxd3 mRNA inejction at 1 cell stage amplification NEB Next High-Fidelity 2X PCR Master Mix assay ATAC-seq SRS3793646 SAMN10081732 GSM3393490 Cit_cherry_8ss_RNAseq 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cit_cherry_8ss_RNAseq strain Gt(foxd3-Citrine)ct110a x Gt(foxd3-Cherry)ct110R tissue Embryo development stage 8 somites cell type Neural crest (foxd3 cells) isolation_method Dissociations and FACS treatment -- amplification Illumina Nextera XT library preparation kit assay RNA-seq SRS3793647 SAMN10081733 GSM3393489 Cit_8ss_RNAseq 7955 Danio rerio bioproject 417594 PRJNA417594 source_name Cit_8ss_RNAseq strain Gt(foxd3-Citrine)ct110a tissue Embryo development stage 8 somites cell type Neural crest (foxd3 cells) isolation_method Dissociations and FACS treatment -- amplification Illumina Nextera XT library preparation kit assay RNA-seq