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    <TITLE>Imari: leaves (2012) - replicate 2</TITLE>
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    <TITLE>Myrna: leaves (2012) - replicate 2</TITLE>
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    <TITLE>Myrna: leaves (2012) - replicate 1</TITLE>
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    <TITLE>Confiance: leaves (2012) - replicate 3</TITLE>
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      <SUBMITTER_ID namespace="SUB3213236">cicoria_endiviae02_GTGAAA_L006_R1_001</SUBMITTER_ID>
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    <TITLE>RNA-seq of C. endivia cv Domari: apices, stems, leaves and roots. Transplant and commercial maturation stages</TITLE>
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    <TITLE>Flester: leaves (2012) - replicate 2</TITLE>
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    <TITLE>Flester: leaves (2012) - replicate 1</TITLE>
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          <SINGLE/>
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        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
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          <SINGLE/>
        </LIBRARY_LAYOUT>
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      <SUBMITTER_ID namespace="SUB3213236">e02-7162_2_TAGCTT_L005_R1_001</SUBMITTER_ID>
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          <SINGLE/>
        </LIBRARY_LAYOUT>
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    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX3385287" alias="e02-c_1_ATGTCA_L007_R1_001">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3385287</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3213236">e02-c_1_ATGTCA_L007_R1_001</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Imari: leaves (2012) - replicate 1</TITLE>
    <STUDY_REF accession="SRP124843">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP124843</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA417356</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>500 mg of leaves at commercial maturation stage were used to isolate total RNA by TRIzol reagent (Invitrogen); yields were estimated by electrophoretic and spectrophotometric analyses (NanoDrop ND-1000; Thermo Scientific Inc.), and RNA integrity number (RIN&gt;7) was verified using BioAnalyzer 2100 (Agilent Technologies Inc). cDNA libraries were prepared using TruSeq RNA-seq sample preparation kit (Illumina) and sequenced in 100bp paired-end mode using an Illumina HiSeq2000 (IGA Technology Services, Udine, Italy).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS2680747">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2680747</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN07983368</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>e02-c_1_ATGTCA_L007_R1_001</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX3385288" alias="confiance_2_ACAGTG_L006_R1_001">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3385288</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3213236">confiance_2_ACAGTG_L006_R1_001</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Confiance: leaves (2012) - replicate 2</TITLE>
    <STUDY_REF accession="SRP124843">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP124843</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA417356</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>500 mg of leaves at commercial maturation stage were used to isolate total RNA by TRIzol reagent (Invitrogen); yields were estimated by electrophoretic and spectrophotometric analyses (NanoDrop ND-1000; Thermo Scientific Inc.), and RNA integrity number (RIN&gt;7) was verified using BioAnalyzer 2100 (Agilent Technologies Inc). cDNA libraries were prepared using TruSeq RNA-seq sample preparation kit (Illumina) and sequenced in 100bp paired-end mode using an Illumina HiSeq2000 (IGA Technology Services, Udine, Italy).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS2680750">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2680750</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN07983388</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>confiance_2_ACAGTG_L006_R1_001</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
