SRX3385550 GSM2854791 SRP124847 SRS2681015 GSM2854791 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854791 GSM2854791 GEO Accession GSM2854791 SRX3385551 GSM2854792 SRP124847 SRS2681014 GSM2854792 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854792 GSM2854792 GEO Accession GSM2854792 SRX3385552 GSM2854793 SRP124847 SRS2681016 GSM2854793 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854793 GSM2854793 GEO Accession GSM2854793 SRX3385553 GSM2854794 SRP124847 SRS2681017 GSM2854794 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854794 GSM2854794 GEO Accession GSM2854794 SRX3385554 GSM2854795 SRP124847 SRS2681018 GSM2854795 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854795 GSM2854795 GEO Accession GSM2854795 SRX3385555 GSM2854796 SRP124847 SRS2681019 GSM2854796 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854796 GSM2854796 GEO Accession GSM2854796 SRX3385556 GSM2854797 SRP124847 SRS2681020 GSM2854797 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854797 GSM2854797 GEO Accession GSM2854797 SRX3385557 GSM2854798 SRP124847 SRS2681021 GSM2854798 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854798 GSM2854798 GEO Accession GSM2854798 SRX3385558 GSM2854799 SRP124847 SRS2681022 GSM2854799 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854799 GSM2854799 GEO Accession GSM2854799 SRX3385559 GSM2854800 SRP124847 SRS2681023 GSM2854800 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854800 GSM2854800 GEO Accession GSM2854800 SRX3385560 GSM2854801 SRP124847 SRS2681024 GSM2854801 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854801 GSM2854801 GEO Accession GSM2854801 SRX3385561 GSM2854802 SRP124847 SRS2681026 GSM2854802 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854802 GSM2854802 GEO Accession GSM2854802 SRX3385562 GSM2854803 SRP124847 SRS2681025 GSM2854803 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854803 GSM2854803 GEO Accession GSM2854803 SRX3385563 GSM2854804 SRP124847 SRS2681027 GSM2854804 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854804 GSM2854804 GEO Accession GSM2854804 SRX3385564 GSM2854805 SRP124847 SRS2681028 GSM2854805 RNA-Seq TRANSCRIPTOMIC cDNA Male flies were harvested and heads were removed by freezing the flies in liquid nitrogen followed by five rounds of vortexing and freezing. RNA was extracted from isolated GFP-tagged photoreceptor nuclei using previously described method by Ma J. and Weake V.M., J Vis Exp 2014 with minor modifications: nuclei were washed with PBS+300 mM NaCl following affinity purification. Control head homogenate (pre) samples were analyzed for day 1 dark samples. Libraries were prepared using NuGen Ovation Drosophila RNA seq system. rRNA was depleted using InDA-C technology. Illumina HiSeq 2500 gds 302854805 GSM2854805 GEO Accession GSM2854805