SRX3408556 mm_BMDM_Wt_24hIL4_ATAC SRP073648 PRJNA318630 Cells were scraped and counted to achieve 50k/ml in ice-cold PBS. Cell suspension was further diluted to 25k/ml and nuclei were isolated with ATAC-LB (10mM Tris-HCl pH7.4, 10mM NaCl, 3mM MgCl2, 0.1% IGEPAL). Nuclei from 25k cells were used for tagmentation using Nextera DNA Library Preparation Kit (Illumina) from two biological replicates. After tagmentation DNA was purified with Minelute PCR Purification Kit (Qiagen). Tagmented DNA was amplified with Kapa Hifi Hot Start Kit (Kapa Biosystems) using 16 PCR cycles. Amplified libraries were purified with AMPure XP magnetic beads. The distribution of libraries was assessed with Agilent Bioanalyzer and sequenced on a HiSeq 2500 platform. SRS1405681 SAMN04868774 mm_BMDM_Wt_24hIL4_ATAC ATAC-seq GENOMIC other Illumina HiSeq 2500 SRX3408557 mm_BMDM_Wt_0hIL4_ATAC SRP073648 PRJNA318630 Cells were scraped and counted to achieve 50k/ml in ice-cold PBS. Cell suspension was further diluted to 25k/ml and nuclei were isolated with ATAC-LB (10mM Tris-HCl pH7.4, 10mM NaCl, 3mM MgCl2, 0.1% IGEPAL). Nuclei from 25k cells were used for tagmentation using Nextera DNA Library Preparation Kit (Illumina) from two biological replicates. After tagmentation DNA was purified with Minelute PCR Purification Kit (Qiagen). Tagmented DNA was amplified with Kapa Hifi Hot Start Kit (Kapa Biosystems) using 16 PCR cycles. Amplified libraries were purified with AMPure XP magnetic beads. The distribution of libraries was assessed with Agilent Bioanalyzer and sequenced on a HiSeq 2500 platform. SRS1405681 SAMN04868774 mm_BMDM_Wt_0hIL4_ATAC ATAC-seq GENOMIC other Illumina HiSeq 2500 SRX3408558 mm_BMDM_RxrKO_24hIL4_ATAC SRP073648 PRJNA318630 Cells were scraped and counted to achieve 50k/ml in ice-cold PBS. Cell suspension was further diluted to 25k/ml and nuclei were isolated with ATAC-LB (10mM Tris-HCl pH7.4, 10mM NaCl, 3mM MgCl2, 0.1% IGEPAL). Nuclei from 25k cells were used for tagmentation using Nextera DNA Library Preparation Kit (Illumina) from two biological replicates. After tagmentation DNA was purified with Minelute PCR Purification Kit (Qiagen). Tagmented DNA was amplified with Kapa Hifi Hot Start Kit (Kapa Biosystems) using 16 PCR cycles. Amplified libraries were purified with AMPure XP magnetic beads. The distribution of libraries was assessed with Agilent Bioanalyzer and sequenced on a HiSeq 2500 platform. SRS2701385 SAMN08043012 mm_BMDM_RxrKO_24hIL4_ATAC ATAC-seq GENOMIC other Illumina HiSeq 2500 SRX3408559 mm_BMDM_RxrKO_0hIL4_ATAC SRP073648 PRJNA318630 Cells were scraped and counted to achieve 50k/ml in ice-cold PBS. Cell suspension was further diluted to 25k/ml and nuclei were isolated with ATAC-LB (10mM Tris-HCl pH7.4, 10mM NaCl, 3mM MgCl2, 0.1% IGEPAL). Nuclei from 25k cells were used for tagmentation using Nextera DNA Library Preparation Kit (Illumina) from two biological replicates. After tagmentation DNA was purified with Minelute PCR Purification Kit (Qiagen). Tagmented DNA was amplified with Kapa Hifi Hot Start Kit (Kapa Biosystems) using 16 PCR cycles. Amplified libraries were purified with AMPure XP magnetic beads. The distribution of libraries was assessed with Agilent Bioanalyzer and sequenced on a HiSeq 2500 platform. SRS2701385 SAMN08043012 mm_BMDM_RxrKO_0hIL4_ATAC ATAC-seq GENOMIC other Illumina HiSeq 2500 SRX3408560 mm_BMDM_PpargKO_24hIL4_ATAC SRP073648 PRJNA318630 Cells were scraped and counted to achieve 50k/ml in ice-cold PBS. Cell suspension was further diluted to 25k/ml and nuclei were isolated with ATAC-LB (10mM Tris-HCl pH7.4, 10mM NaCl, 3mM MgCl2, 0.1% IGEPAL). Nuclei from 25k cells were used for tagmentation using Nextera DNA Library Preparation Kit (Illumina) from two biological replicates. After tagmentation DNA was purified with Minelute PCR Purification Kit (Qiagen). Tagmented DNA was amplified with Kapa Hifi Hot Start Kit (Kapa Biosystems) using 16 PCR cycles. Amplified libraries were purified with AMPure XP magnetic beads. The distribution of libraries was assessed with Agilent Bioanalyzer and sequenced on a HiSeq 2500 platform. SRS2434109 SAMN07508180 mm_BMDM_PpargKO_24hIL4_ATAC ATAC-seq GENOMIC other Illumina HiSeq 2500 SRX3408561 mm_BMDM_PpargKO_0hIL4_ATAC SRP073648 PRJNA318630 Cells were scraped and counted to achieve 50k/ml in ice-cold PBS. Cell suspension was further diluted to 25k/ml and nuclei were isolated with ATAC-LB (10mM Tris-HCl pH7.4, 10mM NaCl, 3mM MgCl2, 0.1% IGEPAL). Nuclei from 25k cells were used for tagmentation using Nextera DNA Library Preparation Kit (Illumina) from two biological replicates. After tagmentation DNA was purified with Minelute PCR Purification Kit (Qiagen). Tagmented DNA was amplified with Kapa Hifi Hot Start Kit (Kapa Biosystems) using 16 PCR cycles. Amplified libraries were purified with AMPure XP magnetic beads. The distribution of libraries was assessed with Agilent Bioanalyzer and sequenced on a HiSeq 2500 platform. SRS2434109 SAMN07508180 mm_BMDM_PpargKO_0hIL4_ATAC ATAC-seq GENOMIC other Illumina HiSeq 2500