<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX3432761" alias="4_rounds">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3432761</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3265039">4_rounds</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>4 rounds of polyA selection followed by RNA-Seq of Salpingoeca rosetta</TITLE>
    <STUDY_REF accession="SRP125871">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP125871</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA420352</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>RNA isolation with RNAqueous kit, genomic DNA digestion with TURBO DNA-free kit, library preparation with Illumina TruSeq v2 mRNA kit, modified to add two extra rounds of polyA mRNA selection (four rounds total)</DESIGN_DESCRIPTION>
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        <IDENTIFIERS>
          <PRIMARY_ID>SRS2724160</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN08109973</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>4_rounds</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX3432762" alias="2_rounds">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3432762</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3265039">2_rounds</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>2 rounds of polyA selection followed by RNA-Seq of Salpingoeca rosetta</TITLE>
    <STUDY_REF accession="SRP125871">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP125871</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA420352</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>RNA isolation with RNAqueous kit, genomic DNA digestion with TURBO DNA-free kit, library preparation with Illumina TruSeq v2 mRNA kit, standard polyA mRNA selection (two rounds)</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS2724160">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS2724160</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN08109973</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>2_rounds</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
