<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX3959977" alias="Hr-male">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3959977</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3881613">Hr-male</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of  Hippophae rhamnoides L. subsp. Sinensis Rousi: adult male leaves</TITLE>
    <STUDY_REF accession="SRP140800">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP140800</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA449144</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>A total amount of 1.5  g RNA per sample was used as input material for the RNA sample preparations. Sequencing libraries were generated using NEBNext  Ultra  RNA Library Prep Kit for Illumina  (NEB, USA) following manufacturer s recommendations and index codes were added to attribute sequences to each sample. Briefly, mRNA was purified from total RNA using poly-T oligo-attached magnetic beads. Fragmentation was carried out using divalent cations under elevated temperature in NEBNext First Strand Synthesis Reaction Buffer 5X . First strand cDNA was synthesized using random hexamer primer and M-MuLV Reverse Transcriptase RNase H- . Second strand cDNA synthesis was subsequently performed using DNA Polymerase I and RNase H. Remaining overhangs were converted into blunt ends via exonuclease/polymerase activities. After adenylation of 3  ends of DNA fragments, NEBNext Adaptor with hairpin loop structure were ligated to prepare for hybridization. In order to select cDNA fragments of preferentially 250~300 bp in length, the library fragments were purified with AMPure XP system (Beckman Coulter, Beverly, USA). Then 3  l USER Enzyme (NEB, USA) was used with size-selected, adaptor-ligated cDNA at 37 C for 15 min followed by 5 min at 95  C before PCR. Then PCR was performed with Phusion High-Fidelity DNA polymerase, Universal PCR primers and Index (X) Primer. At last, PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3190326">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3190326</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN08888098</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Hr-male</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX3959978" alias="Hr-female">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX3959978</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3881613">Hr-female</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of  Hippophae rhamnoides L. subsp. Sinensis Rousi: adult female leaves</TITLE>
    <STUDY_REF accession="SRP140800">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP140800</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA449144</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>A total amount of 1.5  g RNA per sample was used as input material for the RNA sample preparations. Sequencing libraries were generated using NEBNext  Ultra  RNA Library Prep Kit for Illumina  (NEB, USA) following manufacturer s recommendations and index codes were added to attribute sequences to each sample. Briefly, mRNA was purified from total RNA using poly-T oligo-attached magnetic beads. Fragmentation was carried out using divalent cations under elevated temperature in NEBNext First Strand Synthesis Reaction Buffer 5X . First strand cDNA was synthesized using random hexamer primer and M-MuLV Reverse Transcriptase RNase H- . Second strand cDNA synthesis was subsequently performed using DNA Polymerase I and RNase H. Remaining overhangs were converted into blunt ends via exonuclease/polymerase activities. After adenylation of 3  ends of DNA fragments, NEBNext Adaptor with hairpin loop structure were ligated to prepare for hybridization. In order to select cDNA fragments of preferentially 250~300 bp in length, the library fragments were purified with AMPure XP system (Beckman Coulter, Beverly, USA). Then 3  l USER Enzyme (NEB, USA) was used with size-selected, adaptor-ligated cDNA at 37 C for 15 min followed by 5 min at 95  C before PCR. Then PCR was performed with Phusion High-Fidelity DNA polymerase, Universal PCR primers and Index (X) Primer. At last, PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3190326">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3190326</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN08888098</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Hr-female</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
