Bacterial 16S amplicon sequencing of bulk soil, potato common scab conducive field

SRX4167335 HB1 Bacterial 16S amplicon sequencing of bulk soil, potato common scab conducive field SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379417 HB HB1 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167336 HB2 Bacterial 16S amplicon sequencing of bulk soil, potato common scab conducive field SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379417 HB HB2 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167337 HB3 Bacterial 16S amplicon sequencing of bulk soil, potato common scab conducive field SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379417 HB HB3 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167338 HB4 Bacterial 16S amplicon sequencing of bulk soil, potato common scab conducive field SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379417 HB HB4 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167339 HA1 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab conducive field, variety Agria SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379418 HA HA1 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167340 HA2 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab conducive field, variety Agria SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379418 HA HA2 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167341 HA3 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab conducive field, variety Agria SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379418 HA HA3 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167342 HA4 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab conducive field, variety Agria SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379418 HA HA4 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167343 HK1 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab conducive field, variety Kariera SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379419 HK HK1 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167344 HK2 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab conducive field, variety Kariera SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379419 HK HK2 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167345 LK4 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab suppressive field, variety Kariera SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379420 LK LK4 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167346 LK3 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab suppressive field, variety Kariera SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379420 LK LK3 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167347 LK2 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab suppressive field, variety Kariera SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379420 LK LK2 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167348 LK1 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab suppressive field, variety Kariera SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379420 LK LK1 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167349 LB1 Bacterial 16S amplicon sequencing of bulk soil, potato common scab suppressive field SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379421 LB LB1 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167350 LB2 Bacterial 16S amplicon sequencing of bulk soil, potato common scab suppressive field SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379421 LB LB2 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167351 LA3 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab suppressive field, variety Agria SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379422 LA LA3 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167352 LA4 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab suppressive field, variety Agria SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379422 LA LA4 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167353 LA1 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab suppressive field, variety Agria SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379422 LA LA1 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167354 LA2 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab suppressive field, variety Agria SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379422 LA LA2 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167355 HK3 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab conducive field, variety Kariera SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379419 HK HK3 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167356 HK4 Bacterial 16S amplicon sequencing of potato tuberosphere soil, common scab conducive field, variety Kariera SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379419 HK HK4 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167357 LB3 Bacterial 16S amplicon sequencing of bulk soil, potato common scab suppressive field SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379421 LB LB3 AMPLICON METAGENOMIC PCR Illumina MiSeq SRX4167358 LB4 Bacterial 16S amplicon sequencing of bulk soil, potato common scab suppressive field SRP149785 bp0 Environmental DNA isolated by bead-beating and modified phenol/chloroform extraction method 9Sagova-Mareckova et al. 2008). Bacterial 16S rRNA gene fragments amplified with primers CS1-515F/CS2-806R. SRS3379421 LB LB4 AMPLICON METAGENOMIC PCR Illumina MiSeq