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<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX4590800" alias="MT-Mpf-1918d3-F6L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590800</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d3-F6L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (BM18-infected, 3 dpi)</TITLE>
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        <PRIMARY_ID>SRP158565</PRIMARY_ID>
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      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698997">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698997</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d3-F6L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d3-F6L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590801" alias="MT-Mpf-1918d3-F5L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590801</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d3-F5L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (BM18-infected, 3 dpi)</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
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      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698987">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698987</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d3-F5L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d3-F5L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590802" alias="MT-Mpf-1918d1-F4L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590802</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d1-F4L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (BM18-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698986">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698986</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d1-F4L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d1-F4L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590803" alias="MT-Mpf-1918d1-F3L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590803</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d1-F3L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (BM18-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698991">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698991</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d1-F3L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d1-F3L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590804" alias="MT-Mpf-1918d1-F2L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590804</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d1-F2L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (BM18-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698992">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698992</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d1-F2L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d1-F2L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590805" alias="MT-Mpf-1918d1-F1L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590805</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d1-F1L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (BM18-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698990">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698990</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d1-F1L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d1-F1L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590806" alias="MT-Mpf-mock-M4L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590806</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-mock-M4L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698989">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698989</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-mock-M4L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-mock-M4L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590807" alias="MT-Mpf-mock-M3L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590807</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-mock-M3L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698995">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698995</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-mock-M3L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-mock-M3L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590808" alias="MT-Mpf-mock-M2L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590808</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-mock-M2L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698996">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698996</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-mock-M2L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-mock-M2L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590809" alias="MT-Mpf-mock-M1L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590809</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-mock-M1L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698988">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698988</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-mock-M1L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-mock-M1L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590810" alias="LP-A549-H5N1hf-R3-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590810</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1hf-R3-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (VN04::PB1-V43I -infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698994">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698994</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1hf-R3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1hf-R3-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590811" alias="LP-A549-H5N1hf-R4-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590811</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1hf-R4-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (VN04::PB1-V43I -infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698993">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698993</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1hf-R4</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1hf-R4-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590812" alias="LP-A549-WSN-R3-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590812</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-WSN-R3-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (WSN-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698998">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698998</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-WSN-R3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-WSN-R3-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590813" alias="LP-A549-WSN-R4-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590813</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-WSN-R4-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (WSN-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698999">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698999</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-WSN-R4</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-WSN-R4-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590814" alias="LP-A549-H5N1-R1-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590814</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1-R1-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (VN04-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699000">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699000</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1-R1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1-R1-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590815" alias="LP-A549-H5N1-R2-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590815</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1-R2-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (VN04-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699001">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699001</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1-R2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1-R2-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590816" alias="LP-A549-H5N1-R3-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590816</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1-R3-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (VN04-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699002">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699002</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1-R3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1-R3-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590817" alias="LP-A549-H5N1-R4-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590817</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1-R4-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (VN04-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699004">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699004</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1-R4</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1-R4-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590818" alias="LP-A549-H5N1hf-R1-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590818</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1hf-R1-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (VN04::PB1-V43I -infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699008">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699008</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1hf-R1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1hf-R1-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590819" alias="LP-A549-H5N1hf-R2-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590819</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1hf-R2-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (VN04::PB1-V43I -infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699006">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699006</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1hf-R2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1hf-R2-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590820" alias="RD-Mpf-H5N1d1-90L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590820</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d1-90L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (IN05-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699003">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699003</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d1-90L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d1-90L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590821" alias="RD-Mpf-H5N1d1-89L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590821</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d1-89L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (IN05-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699007">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699007</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d1-89L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d1-89L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590822" alias="RD-Mpf-H5N1d1-92L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590822</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d1-92L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (IN05-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699005">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699005</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d1-92L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d1-92L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590823" alias="RD-Mpf-H5N1d1-91L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590823</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d1-91L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (IN05-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699009">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699009</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d1-91L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d1-91L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590824" alias="RD-Mpf-2009d3-42L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590824</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d3-42L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (NL09-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699010">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699010</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d3-42L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d3-42L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590825" alias="RD-Mpf-2009d3-41L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590825</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d3-41L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (NL09-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699011">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699011</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d3-41L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d3-41L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590826" alias="RD-Mpf-2009d3-45L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590826</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d3-45L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (NL09-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699012">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699012</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d3-45L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d3-45L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590827" alias="RD-Mpf-2009d3-43L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590827</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d3-43L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (NL09-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699013">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699013</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d3-43L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d3-43L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590828" alias="RD-Mpf-H5N1d3-98L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590828</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d3-98L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (IN05-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699014">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699014</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d3-98L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d3-98L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590829" alias="RD-Mpf-H5N1d3-97L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590829</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d3-97L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (IN05-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699015">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699015</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d3-97L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d3-97L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590830" alias="MT-Mpf-mock-M4L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590830</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-mock-M4L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698989">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698989</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-mock-M4L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-mock-M4L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590831" alias="MT-Mpf-mock-M3L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590831</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-mock-M3L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698995">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698995</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-mock-M3L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-mock-M3L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590832" alias="LP-A549-H5N1hf-R4-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590832</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1hf-R4-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (VN04::PB1-V43I -infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698993">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698993</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1hf-R4</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1hf-R4-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590833" alias="LP-A549-H5N1hf-R3-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590833</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1hf-R3-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (VN04::PB1-V43I -infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698994">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698994</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1hf-R3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1hf-R3-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590834" alias="MT-Mpf-mock-M2L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590834</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-mock-M2L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698996">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698996</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-mock-M2L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-mock-M2L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590835" alias="MT-Mpf-mock-M1L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590835</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-mock-M1L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698988">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698988</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-mock-M1L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-mock-M1L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590836" alias="LP-A549-H5N1-R4-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590836</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1-R4-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (VN04-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699004">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699004</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1-R4</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1-R4-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590837" alias="LP-A549-H5N1-R3-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590837</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1-R3-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (VN04-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699002">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699002</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1-R3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1-R3-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590838" alias="LP-A549-H5N1hf-R2-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590838</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1hf-R2-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (VN04::PB1-V43I -infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699006">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699006</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1hf-R2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1hf-R2-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590839" alias="LP-A549-H5N1hf-R1-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590839</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1hf-R1-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (VN04::PB1-V43I -infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699008">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699008</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1hf-R1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1hf-R1-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590840" alias="RD-Mpf-2009d1-33L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590840</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d1-33L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (NL09-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699016">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699016</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d1-33L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d1-33L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590841" alias="RD-Mpf-2009d3-43L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590841</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d3-43L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (NL09-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699013">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699013</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d3-43L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d3-43L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590842" alias="RD-Mpf-2009d1-34L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590842</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d1-34L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (NL09-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699017">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699017</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d1-34L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d1-34L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590843" alias="RD-Mpf-mockd3-69L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590843</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-mockd3-69L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699019">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699019</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-mockd3-69L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-mockd3-69L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590844" alias="RD-Mpf-mockd3-70L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590844</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-mockd3-70L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699018">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699018</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-mockd3-70L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-mockd3-70L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590845" alias="RD-Mpf-mockd1-61L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590845</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-mockd1-61L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699021">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699021</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-mockd1-61L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-mockd1-61L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590846" alias="RD-Mpf-mockd1-62L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590846</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-mockd1-62L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699020">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699020</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-mockd1-62L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-mockd1-62L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590847" alias="MT-Mpf-1918d3-F7L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590847</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d3-F7L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (BM18-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699024">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699024</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d3-F7L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d3-F7L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590848" alias="MT-Mpf-1918d3-F8L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590848</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d3-F8L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (BM18-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699022">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699022</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d3-F8L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d3-F8L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590849" alias="RD-Mpf-2009d1-35L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590849</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d1-35L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (NL09-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699026">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699026</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d1-35L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d1-35L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590850" alias="RD-Mpf-2009d1-36L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590850</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d1-36L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (NL09-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699023">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699023</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d1-36L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d1-36L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590851" alias="RD-Mpf-H5N1d3-99L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590851</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d3-99L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (IN05-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699025">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699025</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d3-99L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d3-99L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590852" alias="RD-Mpf-H5N1d3-100L-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590852</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d3-100L-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in ferret lung       tissue (IN05-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699027">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699027</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d3-100L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d3-100L-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590853" alias="RD-Mpf-2009d3-45L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590853</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d3-45L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (NL09-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699012">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699012</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d3-45L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d3-45L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590854" alias="RD-Mpf-2009d1-34L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590854</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d1-34L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (NL09-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699017">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699017</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d1-34L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d1-34L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590855" alias="RD-Mpf-2009d1-33L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590855</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d1-33L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (NL09-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699016">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699016</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d1-33L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d1-33L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590856" alias="RD-Mpf-mockd3-70L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590856</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-mockd3-70L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699018">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699018</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-mockd3-70L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-mockd3-70L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590857" alias="RD-Mpf-mockd3-69L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590857</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-mockd3-69L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699019">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699019</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-mockd3-69L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-mockd3-69L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590858" alias="RD-Mpf-2009d3-42L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590858</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d3-42L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (NL09-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699010">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699010</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d3-42L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d3-42L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590859" alias="RD-Mpf-2009d3-41L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590859</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d3-41L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (NL09-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699011">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699011</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d3-41L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d3-41L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590860" alias="RD-Mpf-2009d1-36L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590860</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d1-36L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (NL09-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699023">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699023</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d1-36L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d1-36L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590861" alias="RD-Mpf-2009d1-35L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590861</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-2009d1-35L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (NL09-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699026">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699026</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-2009d1-35L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-2009d1-35L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590862" alias="MT-Mpf-1918d3-F5L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590862</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d3-F5L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (BM18-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698987">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698987</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d3-F5L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d3-F5L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590863" alias="MT-Mpf-1918d3-F6L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590863</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d3-F6L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (BM18-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698997">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698997</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d3-F6L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d3-F6L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590864" alias="MT-Mpf-1918d3-F7L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590864</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d3-F7L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (BM18-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699024">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699024</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d3-F7L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d3-F7L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590865" alias="MT-Mpf-1918d3-F8L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590865</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d3-F8L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (BM18-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699022">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699022</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d3-F8L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d3-F8L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590866" alias="MT-Mpf-1918d1-F1L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590866</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d1-F1L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (BM18-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698990">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698990</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d1-F1L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d1-F1L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590867" alias="MT-Mpf-1918d1-F2L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590867</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d1-F2L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (BM18-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698992">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698992</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d1-F2L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d1-F2L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590868" alias="MT-Mpf-1918d1-F3L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590868</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d1-F3L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (BM18-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698991">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698991</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d1-F3L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d1-F3L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590869" alias="MT-Mpf-1918d1-F4L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590869</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">MT-Mpf-1918d1-F4L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (BM18-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698986">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698986</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">MT-Mpf-1918d1-F4L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MT-Mpf-1918d1-F4L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590870" alias="RD-Mpf-mockd1-61L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590870</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-mockd1-61L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699021">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699021</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-mockd1-61L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-mockd1-61L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590871" alias="RD-Mpf-mockd1-62L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590871</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-mockd1-62L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699020">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699020</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-mockd1-62L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-mockd1-62L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590872" alias="LP-A549-H5N1-R2-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590872</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1-R2-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (VN04-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699001">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699001</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1-R2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1-R2-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590873" alias="LP-A549-H5N1-R1-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590873</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-H5N1-R1-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (VN04-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699000">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699000</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-H5N1-R1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-H5N1-R1-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590874" alias="LP-A549-WSN-R2-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590874</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-WSN-R2-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (WSN-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699028">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699028</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-WSN-R2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-WSN-R2-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590875" alias="LP-A549-WSN-R1-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590875</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-WSN-R1-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (WSN-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699029">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699029</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-WSN-R1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-WSN-R1-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590876" alias="LP-A549-WSN-R4-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590876</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-WSN-R4-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (WSN-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698999">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698999</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-WSN-R4</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-WSN-R4-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590877" alias="LP-A549-WSN-R3-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590877</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-WSN-R3-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (WSN-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3698998">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3698998</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-WSN-R3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-WSN-R3-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590878" alias="LP-A549-mock-R2-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590878</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-mock-R2-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699032">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699032</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-mock-R2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-mock-R2-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590879" alias="LP-A549-mock-R1-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590879</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-mock-R1-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699035">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699035</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-mock-R1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-mock-R1-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590880" alias="LP-A549-mock-R4-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590880</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-mock-R4-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699034">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699034</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-mock-R4</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-mock-R4-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590881" alias="LP-A549-mock-R3-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590881</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-mock-R3-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of A549 cells (mock)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699031">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699031</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-mock-R3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-mock-R3-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590882" alias="AtV-293-mock-smallRNA-2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590882</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">AtV-293-mock-smallRNA-2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>smallRNA-seq of RPPH-treated &lt;200nt RNA from uninfected cells</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), treated with RPPH (NEB) to convert 5'-triphosphorylated RNA into         monophosphorylated, and libraries were prepared using the NEBNext Small RNA kit (adaptor         ligation, RT, PCR) - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699033">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699033</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">AtV-293-mock</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AtV-293-mock-smallRNA-2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590883" alias="AtV-293-WSN+3P-smallRNA-1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590883</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">AtV-293-WSN+3P-smallRNA-1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>smallRNA-seq of RPPH-treated &lt;200nt RNA from infected cells after 3P       overexpression</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), treated with RPPH (NEB) to convert 5'-triphosphorylated RNA into         monophosphorylated, and libraries were prepared using the NEBNext Small RNA kit (adaptor         ligation, RT, PCR) - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699030">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699030</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">AtV-293-WSN+3P</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AtV-293-WSN+3P-smallRNA-1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590884" alias="AtV-293-WSN+3P-smallRNA-2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590884</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">AtV-293-WSN+3P-smallRNA-2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>smallRNA-seq of RPPH-treated &lt;200nt RNA from infected cells after 3P       overexpression</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), treated with RPPH (NEB) to convert 5'-triphosphorylated RNA into         monophosphorylated, and libraries were prepared using the NEBNext Small RNA kit (adaptor         ligation, RT, PCR) - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699030">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699030</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">AtV-293-WSN+3P</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AtV-293-WSN+3P-smallRNA-2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590885" alias="AtV-293-WSN-smallRNA-2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590885</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">AtV-293-WSN-smallRNA-2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>smallRNA-seq of RPPH-treated &lt;200nt RNA from infected cells</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), treated with RPPH (NEB) to convert 5'-triphosphorylated RNA into         monophosphorylated, and libraries were prepared using the NEBNext Small RNA kit (adaptor         ligation, RT, PCR) - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699036">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699036</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">AtV-293-WSN</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AtV-293-WSN-smallRNA-2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590886" alias="LP-A549-mock-R2-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590886</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-mock-R2-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (uninfected control)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699032">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699032</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-mock-R2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-mock-R2-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590887" alias="LP-A549-mock-R1-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590887</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-mock-R1-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (uninfected control)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699035">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699035</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-mock-R1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-mock-R1-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590888" alias="LP-A549-mock-R4-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590888</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-mock-R4-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (uninfected control)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699034">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699034</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-mock-R4</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-mock-R4-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590889" alias="LP-A549-mock-R3-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590889</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-mock-R3-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (uninfected control)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699031">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699031</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-mock-R3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-mock-R3-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590890" alias="LP-A549-WSN-R2-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590890</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-WSN-R2-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (WSN-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699028">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699028</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-WSN-R2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-WSN-R2-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590891" alias="LP-A549-WSN-R1-directViral">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590891</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">LP-A549-WSN-R1-directViral</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>DirectViral sequencing of influenza virus promoter-containing small RNAs in A549 cells       (WSN-infected)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), mixed with a synthetic spike-in quantitation control, and primers         targeting the conserved promoter sequences of viral vRNA and cRNA and incorporating Illumina         adapter sequences were used for reverse transcription and second-strand cDNA         synthesis - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699029">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699029</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">LP-A549-WSN-R1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>LP-A549-WSN-R1-directViral</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590892" alias="RD-Mpf-H5N1d1-91L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590892</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d1-91L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (IN05-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699009">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699009</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d1-91L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d1-91L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590893" alias="RD-Mpf-H5N1d1-92L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590893</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d1-92L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (IN05-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699005">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699005</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d1-92L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d1-92L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590894" alias="RD-Mpf-H5N1d1-89L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590894</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d1-89L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (IN05-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699007">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699007</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d1-89L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d1-89L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590895" alias="RD-Mpf-H5N1d1-90L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590895</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d1-90L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (IN05-infected, 1 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699003">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699003</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d1-90L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d1-90L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590896" alias="RD-Mpf-H5N1d3-99L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590896</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d3-99L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (IN05-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699025">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699025</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d3-99L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d3-99L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590897" alias="RD-Mpf-H5N1d3-100L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590897</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d3-100L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (IN05-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699027">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699027</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d3-100L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d3-100L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590898" alias="RD-Mpf-H5N1d3-97L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590898</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d3-97L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (IN05-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699015">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699015</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d3-97L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d3-97L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590899" alias="RD-Mpf-H5N1d3-98L-QuantSeq">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590899</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">RD-Mpf-H5N1d3-98L-QuantSeq</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>QuantSeq 3 mRNA-Seq of ferret lung tissue (IN05-infected, 3 dpi)</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>QuantSeq 3 mRNA-Seq library prep on TRIzol-isolated         RNA - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699014">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699014</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">RD-Mpf-H5N1d3-98L</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>RD-Mpf-H5N1d3-98L-QuantSeq</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590900" alias="AtV-293-mock-smallRNA-1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590900</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB3758924">AtV-293-mock-smallRNA-1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>smallRNA-seq of RPPH-treated &lt;200nt RNA from uninfected cells</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), treated with RPPH (NEB) to convert 5'-triphosphorylated RNA into         monophosphorylated, and libraries were prepared using the NEBNext Small RNA kit (adaptor         ligation, RT, PCR) - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699033">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699033</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">AtV-293-mock</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AtV-293-mock-smallRNA-1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX4590901" alias="AtV-293-WSN-smallRNA-1">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX4590901</PRIMARY_ID>
      <EXTERNAL_ID namespace="SubPortal">SUB3758924</EXTERNAL_ID>
      <SUBMITTER_ID namespace="SUB3758924">AtV-293-WSN-smallRNA-1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>smallRNA-seq of RPPH-treated &lt;200nt RNA from infected cells</TITLE>
    <STUDY_REF accession="SRP158565">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP158565</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB3758924">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>TRIzol-isolated RNA was fractionated to select &lt;200 nt (Zymo RNA Clean         &amp; Concentrator), treated with RPPH (NEB) to convert 5'-triphosphorylated RNA into         monophosphorylated, and libraries were prepared using the NEBNext Small RNA kit (adaptor         ligation, RT, PCR) - SUB3758924</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS3699036">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS3699036</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|davidlvb">AtV-293-WSN</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>AtV-293-WSN-smallRNA-1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
