SRX4629449 GSM3370061 SRP159259 SRS3730410 GSM3370061 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370061 GSM3370061 GEO Accession GSM3370061 SRX4629450 GSM3370062 SRP159259 SRS3730411 GSM3370062 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370062 GSM3370062 GEO Accession GSM3370062 SRX4629451 GSM3370063 SRP159259 SRS3730412 GSM3370063 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370063 GSM3370063 GEO Accession GSM3370063 SRX4629452 GSM3370064 SRP159259 SRS3730413 GSM3370064 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370064 GSM3370064 GEO Accession GSM3370064 SRX4629453 GSM3370065 SRP159259 SRS3730414 GSM3370065 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370065 GSM3370065 GEO Accession GSM3370065 SRX4629454 GSM3370066 SRP159259 SRS3730415 GSM3370066 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370066 GSM3370066 GEO Accession GSM3370066 SRX4629455 GSM3370067 SRP159259 SRS3730416 GSM3370067 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370067 GSM3370067 GEO Accession GSM3370067 SRX4629456 GSM3370068 SRP159259 SRS3730417 GSM3370068 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370068 GSM3370068 GEO Accession GSM3370068 SRX4629457 GSM3370069 SRP159259 SRS3730418 GSM3370069 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370069 GSM3370069 GEO Accession GSM3370069 SRX4629458 GSM3370070 SRP159259 SRS3730419 GSM3370070 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370070 GSM3370070 GEO Accession GSM3370070 SRX4629459 GSM3370071 SRP159259 SRS3730420 GSM3370071 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370071 GSM3370071 GEO Accession GSM3370071 SRX4629460 GSM3370072 SRP159259 SRS3730421 GSM3370072 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370072 GSM3370072 GEO Accession GSM3370072 SRX4629461 GSM3370073 SRP159259 SRS3730422 GSM3370073 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370073 GSM3370073 GEO Accession GSM3370073 SRX4629462 GSM3370074 SRP159259 SRS3730423 GSM3370074 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370074 GSM3370074 GEO Accession GSM3370074 SRX4629463 GSM3370075 SRP159259 SRS3730424 GSM3370075 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370075 GSM3370075 GEO Accession GSM3370075 SRX4629464 GSM3370076 SRP159259 SRS3730425 GSM3370076 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370076 GSM3370076 GEO Accession GSM3370076 SRX4629465 GSM3370077 SRP159259 SRS3730426 GSM3370077 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370077 GSM3370077 GEO Accession GSM3370077 SRX4629466 GSM3370078 SRP159259 SRS3730427 GSM3370078 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370078 GSM3370078 GEO Accession GSM3370078 SRX4629467 GSM3370079 SRP159259 SRS3730428 GSM3370079 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370079 GSM3370079 GEO Accession GSM3370079 SRX4629468 GSM3370080 SRP159259 SRS3730429 GSM3370080 RNA-Seq TRANSCRIPTOMIC cDNA Aerial tissue was harvested and frozen in liquid nitrogen prior to RNA extraction. Purified total RNA was extracted from 4 replicates of mock treated and heat shocked plants using Qiagen RNeasy Plant Minikits, following manufacturer protocols. Samples were diluted in order to acquire two micrograms of RNA in preparation for mRNA isolation. mRNA was separated using the NEBNext Poly(A) Magnetic mRNA isolation kit (New England Biolabs). Before library preparation, mRNA samples were heated to 95°C for 15 minutes to achieve 150-200 base pair fragment sizes. NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) was then used to generate libraries for sequencing. cDNA was synthesized with random hexamers.  After performing end repair and adaptor ligation steps, Agencourt AMPure XP beads (Beckman Coulter) were used following recommended ratios in order to isolate 150-200 bp fragments and remove adaptors. After, end repair and adaptor ligation size selection was performed with AMPure beads to isolate 150-200bp fragments and removed adaptors. PCR library enrichment for fifteen cycles was performed. The libraries were run on Agilent Bioanalyzer high sensitivity DNA chip after a 1:4 (or 1:10 if the concentration is too high) dilution. NEBNext Library Quant Kit for Illumina was used to measure library quantity and quality. Finally, the libraries were diluted to 10 nmol/ul concentrations before sequencing. Illumina HiSeq 2500 gds 303370080 GSM3370080 GEO Accession GSM3370080