<?xml version="1.0" encoding="UTF-8"?>
<STUDY_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <STUDY center_name="BioProject" alias="PRJNA508094" accession="SRP172549">
    <IDENTIFIERS>
      <PRIMARY_ID>SRP172549</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioProject" label="primary">PRJNA508094</EXTERNAL_ID>
    </IDENTIFIERS>
    <DESCRIPTOR>
      <STUDY_TITLE>dsDNA Breaks and Genome Editing Trigger Ribosome Remodeling and Translational Shutdown</STUDY_TITLE>
      <STUDY_TYPE existing_study_type="Whole Genome Sequencing"/>
      <STUDY_ABSTRACT>DNA damage activates a robust transcriptional stress response, but much less is known about its impact on translation. The advent of genome editing via Cas9-induced DNA double-strand breaks has intensified interest in understanding cellular responses to DNA damage. Here we find that DNA double-strand breaks (DSBs) induced by Cas9 and other damaging agents lead to a reduction of core ribosomal proteins, RPS27A and RPL40, and that the loss of these proteins is post-transcriptional and p53-independent. DSBs furthermore leads to the shutdown of translation through phosphorylation of eukaryotic initiation factor 2 alpha, and bypassing or enhancing this response affects genome editing outcomes. The DSB translational response is widespread and precedes the canonical transcriptional response. Our results demonstrate that even a single double-strand break can lead to ribosome remodeling and reduced translational output, and suggest caution in interpreting cellular phenotypes measured immediately after genome editing.</STUDY_ABSTRACT>
      <CENTER_PROJECT_NAME>Homo sapiens</CENTER_PROJECT_NAME>
    </DESCRIPTOR>
    <STUDY_ATTRIBUTES>
      <STUDY_ATTRIBUTE>
        <TAG>parent_bioproject</TAG>
        <VALUE>PRJNA508952</VALUE>
      </STUDY_ATTRIBUTE>
    </STUDY_ATTRIBUTES>
  </STUDY>
</STUDY_SET>
