SRX5100925 GSM3503256 SRP172746 SRS4111224 GSM3503256 ncRNA-Seq TRANSCRIPTOMIC size fractionation RNA was isolated from cells via the Fastprep blue kit (MPBiomedicals) For samples 1-3, the library was generated by removing DNA by DNase treatment, depleting rRNA with Ribo-Zero rRNA removal kit for gram-positive bacteria, fragmenting RNA reagent (Ambion), removing 5' triphosphates via RNA 5' polyphosphatase, and subsequently utilizing the TruSeq Small RNA library kit. For samples 4-6, the same protocol was used as for Samples 1-3, but prior to RNA 5' polyphosphatase treatment the RNA was treated with Terminator 5'-phosphate-dependent exoribonuclease. Illumina HiSeq 2000 gds 303503256 GSM3503256 GEO Accession GSM3503256 SRX5100926 GSM3503257 SRP172746 SRS4111225 GSM3503257 ncRNA-Seq TRANSCRIPTOMIC size fractionation RNA was isolated from cells via the Fastprep blue kit (MPBiomedicals) For samples 1-3, the library was generated by removing DNA by DNase treatment, depleting rRNA with Ribo-Zero rRNA removal kit for gram-positive bacteria, fragmenting RNA reagent (Ambion), removing 5' triphosphates via RNA 5' polyphosphatase, and subsequently utilizing the TruSeq Small RNA library kit. For samples 4-6, the same protocol was used as for Samples 1-3, but prior to RNA 5' polyphosphatase treatment the RNA was treated with Terminator 5'-phosphate-dependent exoribonuclease. Illumina HiSeq 2000 gds 303503257 GSM3503257 GEO Accession GSM3503257 SRX5100927 GSM3503258 SRP172746 SRS4111226 GSM3503258 ncRNA-Seq TRANSCRIPTOMIC size fractionation RNA was isolated from cells via the Fastprep blue kit (MPBiomedicals) For samples 1-3, the library was generated by removing DNA by DNase treatment, depleting rRNA with Ribo-Zero rRNA removal kit for gram-positive bacteria, fragmenting RNA reagent (Ambion), removing 5' triphosphates via RNA 5' polyphosphatase, and subsequently utilizing the TruSeq Small RNA library kit. For samples 4-6, the same protocol was used as for Samples 1-3, but prior to RNA 5' polyphosphatase treatment the RNA was treated with Terminator 5'-phosphate-dependent exoribonuclease. Illumina HiSeq 2000 gds 303503258 GSM3503258 GEO Accession GSM3503258 SRX5100928 GSM3503259 SRP172746 SRS4111227 GSM3503259 ncRNA-Seq TRANSCRIPTOMIC size fractionation RNA was isolated from cells via the Fastprep blue kit (MPBiomedicals) For samples 1-3, the library was generated by removing DNA by DNase treatment, depleting rRNA with Ribo-Zero rRNA removal kit for gram-positive bacteria, fragmenting RNA reagent (Ambion), removing 5' triphosphates via RNA 5' polyphosphatase, and subsequently utilizing the TruSeq Small RNA library kit. For samples 4-6, the same protocol was used as for Samples 1-3, but prior to RNA 5' polyphosphatase treatment the RNA was treated with Terminator 5'-phosphate-dependent exoribonuclease. Illumina HiSeq 2000 gds 303503259 GSM3503259 GEO Accession GSM3503259 SRX5100929 GSM3503260 SRP172746 SRS4111228 GSM3503260 ncRNA-Seq TRANSCRIPTOMIC size fractionation RNA was isolated from cells via the Fastprep blue kit (MPBiomedicals) For samples 1-3, the library was generated by removing DNA by DNase treatment, depleting rRNA with Ribo-Zero rRNA removal kit for gram-positive bacteria, fragmenting RNA reagent (Ambion), removing 5' triphosphates via RNA 5' polyphosphatase, and subsequently utilizing the TruSeq Small RNA library kit. For samples 4-6, the same protocol was used as for Samples 1-3, but prior to RNA 5' polyphosphatase treatment the RNA was treated with Terminator 5'-phosphate-dependent exoribonuclease. Illumina HiSeq 2000 gds 303503260 GSM3503260 GEO Accession GSM3503260 SRX5100930 GSM3503261 SRP172746 SRS4111229 GSM3503261 ncRNA-Seq TRANSCRIPTOMIC size fractionation RNA was isolated from cells via the Fastprep blue kit (MPBiomedicals) For samples 1-3, the library was generated by removing DNA by DNase treatment, depleting rRNA with Ribo-Zero rRNA removal kit for gram-positive bacteria, fragmenting RNA reagent (Ambion), removing 5' triphosphates via RNA 5' polyphosphatase, and subsequently utilizing the TruSeq Small RNA library kit. For samples 4-6, the same protocol was used as for Samples 1-3, but prior to RNA 5' polyphosphatase treatment the RNA was treated with Terminator 5'-phosphate-dependent exoribonuclease. Illumina HiSeq 2000 gds 303503261 GSM3503261 GEO Accession GSM3503261