<?xml version="1.0" encoding="UTF-8"?>
<SAMPLE_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <SAMPLE alias="pseudogene_S16" accession="SRS4217386">
    <IDENTIFIERS>
      <PRIMARY_ID>SRS4217386</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioSample">SAMN10701652</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>pseudogene_S16</TITLE>
    <SAMPLE_NAME>
      <TAXON_ID>10090</TAXON_ID>
      <SCIENTIFIC_NAME>Mus musculus</SCIENTIFIC_NAME>
    </SAMPLE_NAME>
    <DESCRIPTION>In this study we analysed recombination events in the mouse genome. We designed primers for several pseudogenes in TCR regions and sequenced the pooled PCR products</DESCRIPTION>
    <SAMPLE_LINKS>
      <SAMPLE_LINK>
        <XREF_LINK>
          <DB>bioproject</DB>
          <ID>400571</ID>
          <LABEL>PRJNA400571</LABEL>
        </XREF_LINK>
      </SAMPLE_LINK>
    </SAMPLE_LINKS>
    <SAMPLE_ATTRIBUTES>
      <SAMPLE_ATTRIBUTE>
        <TAG>strain</TAG>
        <VALUE>C57Bl6 iRAGu endoR2-/-</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>isolate</TAG>
        <VALUE>total thymocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>age</TAG>
        <VALUE>6-8 weeks</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sex</TAG>
        <VALUE>not collected</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>tissue</TAG>
        <VALUE>Thymocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>cell_type</TAG>
        <VALUE>T lymphocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>collected_by</TAG>
        <VALUE>Marie Bonnet</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>store_cond</TAG>
        <VALUE>-80C</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>treatment</TAG>
        <VALUE>4 weeks of TAM-food treatment before analysis</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>replicate</TAG>
        <VALUE>pseudogene</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>BioSampleModel</TAG>
        <VALUE>Model organism or animal</VALUE>
      </SAMPLE_ATTRIBUTE>
    </SAMPLE_ATTRIBUTES>
  </SAMPLE>
  <SAMPLE alias="CRSS-TCRB1_S26" accession="SRS4217388">
    <IDENTIFIERS>
      <PRIMARY_ID>SRS4217388</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioSample">SAMN10701650</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>CRSS-TCRB1_S26</TITLE>
    <SAMPLE_NAME>
      <TAXON_ID>10090</TAXON_ID>
      <SCIENTIFIC_NAME>Mus musculus</SCIENTIFIC_NAME>
    </SAMPLE_NAME>
    <DESCRIPTION>In this study we analysed recombination events in the mouse genome. We designed primers for several regions within the mouse genome and sequenced the pooled PCR products</DESCRIPTION>
    <SAMPLE_LINKS>
      <SAMPLE_LINK>
        <XREF_LINK>
          <DB>bioproject</DB>
          <ID>400571</ID>
          <LABEL>PRJNA400571</LABEL>
        </XREF_LINK>
      </SAMPLE_LINK>
    </SAMPLE_LINKS>
    <SAMPLE_ATTRIBUTES>
      <SAMPLE_ATTRIBUTE>
        <TAG>strain</TAG>
        <VALUE>C57Bl6 iRAGu endoR2-/-</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>isolate</TAG>
        <VALUE>total thymocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>age</TAG>
        <VALUE>6-8 weeks</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sex</TAG>
        <VALUE>not collected</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>tissue</TAG>
        <VALUE>Thymocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>cell_type</TAG>
        <VALUE>T lymphocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>collected_by</TAG>
        <VALUE>Marie Bonnet</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>store_cond</TAG>
        <VALUE>-80C</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>treatment</TAG>
        <VALUE>4 weeks of TAM-food treatment before analysis</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>replicate</TAG>
        <VALUE>cRSS-TCRb_1</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>BioSampleModel</TAG>
        <VALUE>Model organism or animal</VALUE>
      </SAMPLE_ATTRIBUTE>
    </SAMPLE_ATTRIBUTES>
  </SAMPLE>
  <SAMPLE alias="cRSS-Bcl11b_S2S6" accession="SRS4217389">
    <IDENTIFIERS>
      <PRIMARY_ID>SRS4217389</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioSample">SAMN10701648</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>cRSS-Bcl11b_S2S6</TITLE>
    <SAMPLE_NAME>
      <TAXON_ID>10090</TAXON_ID>
      <SCIENTIFIC_NAME>Mus musculus</SCIENTIFIC_NAME>
    </SAMPLE_NAME>
    <DESCRIPTION>In this study we analysed recombination events in the mouse genome. We designed primers for several regions within the bcl locus in mouse genome and sequenced the pooled PCR products</DESCRIPTION>
    <SAMPLE_LINKS>
      <SAMPLE_LINK>
        <XREF_LINK>
          <DB>bioproject</DB>
          <ID>400571</ID>
          <LABEL>PRJNA400571</LABEL>
        </XREF_LINK>
      </SAMPLE_LINK>
    </SAMPLE_LINKS>
    <SAMPLE_ATTRIBUTES>
      <SAMPLE_ATTRIBUTE>
        <TAG>strain</TAG>
        <VALUE>C57Bl6 iRAGu endoR2-/-</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>isolate</TAG>
        <VALUE>total thymocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>age</TAG>
        <VALUE>6-8 weeks</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sex</TAG>
        <VALUE>not collected</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>tissue</TAG>
        <VALUE>Thymocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>cell_type</TAG>
        <VALUE>T lymphocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>collected_by</TAG>
        <VALUE>Marie Bonnet</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>store_cond</TAG>
        <VALUE>-80C</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>treatment</TAG>
        <VALUE>4 weeks of TAM-food treatment before analysis</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>replicate</TAG>
        <VALUE>cRSS-Bcl11b</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>BioSampleModel</TAG>
        <VALUE>Model organism or animal</VALUE>
      </SAMPLE_ATTRIBUTE>
    </SAMPLE_ATTRIBUTES>
  </SAMPLE>
  <SAMPLE alias="cRSS-TCRb_S17" accession="SRS4217390">
    <IDENTIFIERS>
      <PRIMARY_ID>SRS4217390</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioSample">SAMN10701651</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>cRSS-TCRb_S17</TITLE>
    <SAMPLE_NAME>
      <TAXON_ID>10090</TAXON_ID>
      <SCIENTIFIC_NAME>Mus musculus</SCIENTIFIC_NAME>
    </SAMPLE_NAME>
    <DESCRIPTION>In this study we analysed recombination events in the mouse genome. We designed primers for several TCR regions within the mouse genome and sequenced the pooled PCR products</DESCRIPTION>
    <SAMPLE_LINKS>
      <SAMPLE_LINK>
        <XREF_LINK>
          <DB>bioproject</DB>
          <ID>400571</ID>
          <LABEL>PRJNA400571</LABEL>
        </XREF_LINK>
      </SAMPLE_LINK>
    </SAMPLE_LINKS>
    <SAMPLE_ATTRIBUTES>
      <SAMPLE_ATTRIBUTE>
        <TAG>strain</TAG>
        <VALUE>C57Bl6 iRAGu endoR2-/-</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>isolate</TAG>
        <VALUE>total thymocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>age</TAG>
        <VALUE>6-8 weeks</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sex</TAG>
        <VALUE>not collected</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>tissue</TAG>
        <VALUE>Thymocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>cell_type</TAG>
        <VALUE>T lymphocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>collected_by</TAG>
        <VALUE>Marie Bonnet</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>store_cond</TAG>
        <VALUE>-80C</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>treatment</TAG>
        <VALUE>4 weeks of TAM-food treatment before analysis</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>replicate</TAG>
        <VALUE>cRSS-TCRb_2</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>BioSampleModel</TAG>
        <VALUE>Model organism or animal</VALUE>
      </SAMPLE_ATTRIBUTE>
    </SAMPLE_ATTRIBUTES>
  </SAMPLE>
  <SAMPLE alias="cRSS-elsew_S18" accession="SRS4217391">
    <IDENTIFIERS>
      <PRIMARY_ID>SRS4217391</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioSample">SAMN10701649</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>cRSS-elsew_S18</TITLE>
    <SAMPLE_NAME>
      <TAXON_ID>10090</TAXON_ID>
      <SCIENTIFIC_NAME>Mus musculus</SCIENTIFIC_NAME>
    </SAMPLE_NAME>
    <DESCRIPTION>In this study we analysed recombination events in the mouse genome. We designed primers for several regions within the mouse genome and sequenced the pooled PCR products</DESCRIPTION>
    <SAMPLE_LINKS>
      <SAMPLE_LINK>
        <XREF_LINK>
          <DB>bioproject</DB>
          <ID>400571</ID>
          <LABEL>PRJNA400571</LABEL>
        </XREF_LINK>
      </SAMPLE_LINK>
    </SAMPLE_LINKS>
    <SAMPLE_ATTRIBUTES>
      <SAMPLE_ATTRIBUTE>
        <TAG>strain</TAG>
        <VALUE>C57Bl6 iRAGu endoR2-/-</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>isolate</TAG>
        <VALUE>total thymocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>age</TAG>
        <VALUE>6-8 weeks</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sex</TAG>
        <VALUE>not collected</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>tissue</TAG>
        <VALUE>Thymocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>cell_type</TAG>
        <VALUE>T lymphocytes</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>collected_by</TAG>
        <VALUE>Marie Bonnet</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>store_cond</TAG>
        <VALUE>-80C</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>treatment</TAG>
        <VALUE>4 weeks of TAM-food treatment before analysis</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>replicate</TAG>
        <VALUE>cRSS-elsew</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>BioSampleModel</TAG>
        <VALUE>Model organism or animal</VALUE>
      </SAMPLE_ATTRIBUTE>
    </SAMPLE_ATTRIBUTES>
  </SAMPLE>
</SAMPLE_SET>
