SRX5504352 24799_S139_L001_R1_001.fastq.gz.YDCAFETCKME/24799 <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472864"> <IDENTIFIERS> <PRIMARY_ID>SRS4472864</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/24799</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>24799_S139_L001_R1_001.fastq.gz.YDCAFETCKME/24799</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>missing</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina MiSeq</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX5504353" alias="24220_S81_L001_R1_001.fastq.gz.YDCAFETCKME/24220"> <IDENTIFIERS> <PRIMARY_ID>SRX5504353</PRIMARY_ID> <SUBMITTER_ID namespace="SUB5304578">24220_S81_L001_R1_001.fastq.gz.YDCAFETCKME/24220</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472865"> <IDENTIFIERS> <PRIMARY_ID>SRS4472865</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and 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Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472866"> <IDENTIFIERS> <PRIMARY_ID>SRS4472866</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/23098</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>23098_S91_L001_R1_001.fastq.gz.YDCAFETCKME/23098</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>missing</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina MiSeq</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX5504355" alias="24778_S85_L001_R1_001.fastq.gz.YDCAFETCKME/24778"> <IDENTIFIERS> <PRIMARY_ID>SRX5504355</PRIMARY_ID> <SUBMITTER_ID namespace="SUB5304578">24778_S85_L001_R1_001.fastq.gz.YDCAFETCKME/24778</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472868"> <IDENTIFIERS> <PRIMARY_ID>SRS4472868</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/24778</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>24778_S85_L001_R1_001.fastq.gz.YDCAFETCKME/24778</LIBRARY_NAME> 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namespace="SUB5304578">23089_S71_L001_R1_001.fastq.gz.YDCAFETCKME/23089</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472869"> <IDENTIFIERS> <PRIMARY_ID>SRS4472869</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/23089</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>23089_S71_L001_R1_001.fastq.gz.YDCAFETCKME/23089</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> 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namespace="SUB5304578">23085_S70_L001_R1_001.fastq.gz.YDCAFETCKME/23085</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472879"> <IDENTIFIERS> <PRIMARY_ID>SRS4472879</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/23085</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>23085_S70_L001_R1_001.fastq.gz.YDCAFETCKME/23085</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> 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<EXPERIMENT accession="SRX5504370" alias="24782_S3_L001_R1_001.fastq.gz.YDCAFETCKME/24782"> <IDENTIFIERS> <PRIMARY_ID>SRX5504370</PRIMARY_ID> <SUBMITTER_ID namespace="SUB5304578">24782_S3_L001_R1_001.fastq.gz.YDCAFETCKME/24782</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472882"> <IDENTIFIERS> <PRIMARY_ID>SRS4472882</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/24782</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>24782_S3_L001_R1_001.fastq.gz.YDCAFETCKME/24782</LIBRARY_NAME> 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namespace="SUB5304578">23099_S74_L001_R1_001.fastq.gz.YDCAFETCKME/23099</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472884"> <IDENTIFIERS> <PRIMARY_ID>SRS4472884</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/23099</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>23099_S74_L001_R1_001.fastq.gz.YDCAFETCKME/23099</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> 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namespace="SUB5304578">24246_S112_L001_R1_001.fastq.gz.YDCAFETCKME/24246</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472890"> <IDENTIFIERS> <PRIMARY_ID>SRS4472890</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/24246</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>24246_S112_L001_R1_001.fastq.gz.YDCAFETCKME/24246</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> 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<EXPERIMENT accession="SRX5504380" alias="23102_S92_L001_R1_001.fastq.gz.YDCAFETCKME/23102"> <IDENTIFIERS> <PRIMARY_ID>SRX5504380</PRIMARY_ID> <SUBMITTER_ID namespace="SUB5304578">23102_S92_L001_R1_001.fastq.gz.YDCAFETCKME/23102</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472891"> <IDENTIFIERS> <PRIMARY_ID>SRS4472891</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/23102</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>23102_S92_L001_R1_001.fastq.gz.YDCAFETCKME/23102</LIBRARY_NAME> 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<LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>missing</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina MiSeq</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX5504391" alias="23115_S76_L001_R1_001.fastq.gz.YDCAFETCKME/23115"> <IDENTIFIERS> <PRIMARY_ID>SRX5504391</PRIMARY_ID> <SUBMITTER_ID namespace="SUB5304578">23115_S76_L001_R1_001.fastq.gz.YDCAFETCKME/23115</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> 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Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472906"> <IDENTIFIERS> <PRIMARY_ID>SRS4472906</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/23095</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>23095_S73_L001_R1_001.fastq.gz.YDCAFETCKME/23095</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>missing</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina MiSeq</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX5504395" alias="24222_S126_L001_R1_001.fastq.gz.YDCAFETCKME/24222"> <IDENTIFIERS> <PRIMARY_ID>SRX5504395</PRIMARY_ID> <SUBMITTER_ID namespace="SUB5304578">24222_S126_L001_R1_001.fastq.gz.YDCAFETCKME/24222</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472907"> <IDENTIFIERS> <PRIMARY_ID>SRS4472907</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/24222</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>24222_S126_L001_R1_001.fastq.gz.YDCAFETCKME/24222</LIBRARY_NAME> 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namespace="SUB5304578">24794_S106_L001_R1_001.fastq.gz.YDCAFETCKME/24794</SUBMITTER_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP188121"> <IDENTIFIERS> <PRIMARY_ID>SRP188121</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">ART administration in healthy rhesus macaques is associated with altered intestinal bacterial diversity and immune dysfunction.</SUBMITTER_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS4472910"> <IDENTIFIERS> <PRIMARY_ID>SRS4472910</PRIMARY_ID> <SUBMITTER_ID namespace="NIAID Bioinformatics and Computational Biosciences Branch">YDCAFETCKME/24794</SUBMITTER_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>24794_S106_L001_R1_001.fastq.gz.YDCAFETCKME/24794</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> 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