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  <STUDY center_name="GEO" alias="GSE129034" accession="SRP189858">
    <IDENTIFIERS>
      <PRIMARY_ID>SRP189858</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioProject" label="primary">PRJNA529812</EXTERNAL_ID>
      <EXTERNAL_ID namespace="GEO">GSE129034</EXTERNAL_ID>
    </IDENTIFIERS>
    <DESCRIPTOR>
      <STUDY_TITLE>Comparison of chromatin accessibility between human and non-human primates</STUDY_TITLE>
      <STUDY_TYPE existing_study_type="Other"/>
      <STUDY_ABSTRACT>Evolution of transcriptional regulation is thought to be a major cause of the evolution of phenotypic traits. We compared DNase I Hypersensitive sites in fibroblast cells from five primates (human, chimpanzee, gorilla, orangutan, and macaque). We identified approximately 90,000 DHS sites, of which 59% are not significantly different between species, 27% are differential and likely due to a single evolutionary change, and 14% are differential and likely due to multiple changes. We found that including additional closely related species allows us to better distinguish between accessibility changes that are specific to a single species and those that have experienced changes in chromatin accessibility across multiple species during evolution. Overall design: DNase-seq of 3 biological replicates from each of 5 species: human, chimpanzee, gorilla, orangutan, and macaque. Grant ID: HOMINID 0827552 Funding source: NSF Grant title: Genetic Bases for the Evolution of Human Diet Grantee name: Gregory Wray</STUDY_ABSTRACT>
      <CENTER_PROJECT_NAME>GSE129034</CENTER_PROJECT_NAME>
    </DESCRIPTOR>
    <STUDY_LINKS>
      <STUDY_LINK>
        <XREF_LINK>
          <DB>pubmed</DB>
          <ID>31599933</ID>
        </XREF_LINK>
      </STUDY_LINK>
    </STUDY_LINKS>
  </STUDY>
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