<?xml version="1.0" encoding="UTF-8"?>
<STUDY_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <STUDY center_name="GEO" alias="GSE131025" accession="SRP197612">
    <IDENTIFIERS>
      <PRIMARY_ID>SRP197612</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioProject" label="primary">PRJNA542363</EXTERNAL_ID>
      <EXTERNAL_ID namespace="GEO">GSE131025</EXTERNAL_ID>
    </IDENTIFIERS>
    <DESCRIPTOR>
      <STUDY_TITLE>Three-dimensional genome restructuring across timescales of activity-induced neuronal gene expression</STUDY_TITLE>
      <STUDY_TYPE existing_study_type="Other"/>
      <STUDY_ABSTRACT>Post-mitotic neurons in the mammalian brain form synapses that dynamically remodel throughout an individual's lifetime to encode learning and memory.  Here, we create high-resolution genome folding maps in &gt;12 Megabases around IEGs and synaptic genes and find that 12% of long-range looping interactions are induced de novo during cortical neuron activation. Overall design: Gene expression, enhancer activity, and looping status across 3 neuronal activity states quantified by RNA-seq, H3K27ac ChIP-seq, and 5C.</STUDY_ABSTRACT>
      <CENTER_PROJECT_NAME>GSE131025</CENTER_PROJECT_NAME>
    </DESCRIPTOR>
    <STUDY_LINKS>
      <STUDY_LINK>
        <XREF_LINK>
          <DB>pubmed</DB>
          <ID>32451484</ID>
        </XREF_LINK>
      </STUDY_LINK>
    </STUDY_LINKS>
  </STUDY>
</STUDY_SET>
