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<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX5983336" alias="C">
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      <PRIMARY_ID>SRX5983336</PRIMARY_ID>
      <SUBMITTER_ID namespace="UMMSM-phs001835">C</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Ocular Melanocytosis</TITLE>
    <STUDY_REF accession="SRP200693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP200693</PRIMARY_ID>
        <EXTERNAL_ID namespace="dbGaP">phs001835</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>"DNA was extracted using the Wizard Genomic DNA Purification kit (Promega, Madison, WI). Exome fragments were captured using the Agilent SureSelect XT Human All Exon V5 kit and sequenced  on the Illumina HiSeq 2500 with 100-bp paired-end sequencing"</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS4889032" refcenter="phs001835" refname="S1">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS4889032</PRIMARY_ID>
          <SUBMITTER_ID namespace="phs001835">S1</SUBMITTER_ID>
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      </SAMPLE_DESCRIPTOR>
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        <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
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            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>101</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>alignment_software</TAG>
        <VALUE>Novoalign</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX5983337" alias="T">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX5983337</PRIMARY_ID>
      <SUBMITTER_ID namespace="UMMSM-phs001835">T</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Uveal Melanoma</TITLE>
    <STUDY_REF accession="SRP200693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP200693</PRIMARY_ID>
        <EXTERNAL_ID namespace="dbGaP">phs001835</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>"DNA was extracted using the Wizard Genomic DNA Purification kit (Promega, Madison, WI). Exome fragments were captured using the Agilent SureSelect XT Human All Exon V5 kit and sequenced  on the Illumina HiSeq 2500 with 100-bp paired-end sequencing"</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS4889033" refcenter="phs001835" refname="S2">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS4889033</PRIMARY_ID>
          <SUBMITTER_ID namespace="phs001835">S2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
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          <PAIRED/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>200</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>101</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>alignment_software</TAG>
        <VALUE>Novoalign</VALUE>
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    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX5983338" alias="B">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX5983338</PRIMARY_ID>
      <SUBMITTER_ID namespace="UMMSM-phs001835">B</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Blood</TITLE>
    <STUDY_REF accession="SRP200693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP200693</PRIMARY_ID>
        <EXTERNAL_ID namespace="dbGaP">phs001835</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>"DNA was extracted using the Quick Gene DNA whole blood kit S (Fugifilm, Tokyo, Japan). Exome fragments were captured using the Agilent SureSelect XT Human All Exon V5 kit and sequenced  on the Illumina HiSeq 2500 with 100-bp paired-end sequencing"</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS4889034" refcenter="phs001835" refname="S3">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS4889034</PRIMARY_ID>
          <SUBMITTER_ID namespace="phs001835">S3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>B</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WXS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Hybrid Selection</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>200</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>101</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>alignment_software</TAG>
        <VALUE>Novoalign</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
