<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="GSM4182041" accession="SRX7186807">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186807</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182041</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182041: WTcontrol-1; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693022">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693022</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182041</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182041</ID>
          <LABEL>GSM4182041</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182041</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182042" accession="SRX7186808">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186808</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182042</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182042: WTcontrol-2; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693023">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693023</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182042</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182042</ID>
          <LABEL>GSM4182042</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182042</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182043" accession="SRX7186809">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186809</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182043</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182043: WTcontrol-3; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693024">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693024</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182043</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182043</ID>
          <LABEL>GSM4182043</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182043</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182044" accession="SRX7186810">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186810</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182044</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182044: WTcontrol-4; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693025">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693025</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182044</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182044</ID>
          <LABEL>GSM4182044</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182044</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182045" accession="SRX7186811">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186811</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182045</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182045: WTInjured-1; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693026">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693026</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182045</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182045</ID>
          <LABEL>GSM4182045</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182045</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182046" accession="SRX7186812">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186812</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182046</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182046: WTInjured-2; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693027">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693027</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182046</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182046</ID>
          <LABEL>GSM4182046</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182046</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182047" accession="SRX7186813">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186813</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182047</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182047: WTInjured-3; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693028">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693028</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182047</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182047</ID>
          <LABEL>GSM4182047</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182047</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182048" accession="SRX7186814">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186814</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182048</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182048: WTInjured-4; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693029">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693029</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182048</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182048</ID>
          <LABEL>GSM4182048</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182048</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182049" accession="SRX7186815">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186815</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182049</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182049: TLR3control-1; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693030">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693030</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182049</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182049</ID>
          <LABEL>GSM4182049</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182049</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182050" accession="SRX7186816">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186816</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182050</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182050: TLR3control-2; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693031">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693031</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182050</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182050</ID>
          <LABEL>GSM4182050</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182050</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182051" accession="SRX7186817">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186817</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182051</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182051: TLR3control-3; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693032">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693032</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182051</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182051</ID>
          <LABEL>GSM4182051</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182051</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182052" accession="SRX7186818">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186818</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182052</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182052: TLR3control-4; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693033">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693033</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182052</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182052</ID>
          <LABEL>GSM4182052</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182052</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182053" accession="SRX7186819">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186819</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182053</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182053: TLR3Injured-1; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693034">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693034</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182053</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182053</ID>
          <LABEL>GSM4182053</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182053</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182054" accession="SRX7186820">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186820</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182054</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182054: TLR3Injured-2; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693035">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693035</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182054</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182054</ID>
          <LABEL>GSM4182054</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182054</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182055" accession="SRX7186821">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186821</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182055</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182055: TLR3Injured-3; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693036">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693036</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182055</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182055</ID>
          <LABEL>GSM4182055</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182055</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4182056" accession="SRX7186822">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7186822</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4182056</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4182056: TLR3Injured-4; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP230639" refname="GSE140693">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP230639</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5693037">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5693037</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4182056</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Macrophages were isolated from the BAL fluid and total RNA was extracted from Macrophages using Qiagen Rneasy Mini Kit. Paired end 50. TruSeq mRNA.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 4000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304182056</ID>
          <LABEL>GSM4182056</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4182056</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
