Source Name	Characteristics[sample_name]	Characteristics[organism]	Characteristics[taxonomy_id]	Characteristics[strain]	Characteristics[cell_type]	Characteristics[chem_administration]	Characteristics[passage_history]	Comment[BioSample]	Comment[sample_title]	Protocol REF	Protocol REF	Protocol REF	Extract Name	Material Type	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[INSTRUMENT_MODEL]	Protocol REF	Assay Name	Comment[SRA_EXPERIMENT]	Comment[SRA_RUN]	Technology Type	Array Data File	Protocol REF	Derived Array Data Matrix File	Factor Value[treatment]
Control-1	Control-1	Mus musculus	10090	C57/BL6	Enteroid		P0	SAMD00232154	Sample from the control enteroid -replicate1	P-GEAD-523	P-GEAD-524	P-GEAD-525	Control-1	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	Control-1	DRX226076	DRR235891	sequencing assay	DRR235891	P-GEAD-527	data2.txt	untreated-1
Control-2	Control-2	Mus musculus	10090	C57/BL6	Enteroid		P0	SAMD00232155	Sample from the control enteroid -replicate2	P-GEAD-523	P-GEAD-524	P-GEAD-525	Control-2	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	Control-2	DRX226077	DRR235892	sequencing assay	DRR235892	P-GEAD-527	data2.txt	untreated-2
Control-3	Control-3	Mus musculus	10090	C57/BL6	Enteroid		P0	SAMD00232156	Sample from the control enteroid -replicate3	P-GEAD-523	P-GEAD-524	P-GEAD-525	Control-3	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	Control-3	DRX226078	DRR235893	sequencing assay	DRR235893	P-GEAD-527	data2.txt	untreated-3
PBS inj-1	PBS inj-1	Mus musculus	10090	C57/BL6	Enteroid	PBS (luminal)	P0	SAMD00232157	Sample from PBS injected enteroid -replicate1	P-GEAD-523	P-GEAD-524	P-GEAD-525	PBS inj-1	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	PBS inj-1	DRX226079	DRR235894	sequencing assay	DRR235894	P-GEAD-527	data2.txt	PBS injected-1
PBS inj-2	PBS inj-2	Mus musculus	10090	C57/BL6	Enteroid	PBS (luminal)	P0	SAMD00232158	Sample from PBS injected enteroid -replicate2	P-GEAD-523	P-GEAD-524	P-GEAD-525	PBS inj-2	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	PBS inj-2	DRX226080	DRR235895	sequencing assay	DRR235895	P-GEAD-527	data2.txt	PBS injected-2
PBS inj-3	PBS inj-3	Mus musculus	10090	C57/BL6	Enteroid	PBS (luminal)	P0	SAMD00232159	Sample from PBS injected enteroid -replicate3	P-GEAD-523	P-GEAD-524	P-GEAD-525	PBS inj-3	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	PBS inj-3	DRX226081	DRR235896	sequencing assay	DRR235896	P-GEAD-527	data2.txt	PBS injected-3
DON inj-1	DON inj-1	Mus musculus	10090	C57/BL6	Enteroid	1uM DON (luminal)	P0	SAMD00232160	Sample from 1 uM DON injected enteroid (luminal exposure) -replicate1	P-GEAD-523	P-GEAD-524	P-GEAD-525	DON inj-1	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	DON inj-1	DRX226082	DRR235897	sequencing assay	DRR235897	P-GEAD-527	data2.txt	1 uM DON luminal exposure-1
DON inj-2	DON inj-2	Mus musculus	10090	C57/BL6	Enteroid	1uM DON (luminal)	P0	SAMD00232161	Sample from 1 uM DON injected enteroid (luminal exposure) -replicate2	P-GEAD-523	P-GEAD-524	P-GEAD-525	DON inj-2	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	DON inj-2	DRX226083	DRR235898	sequencing assay	DRR235898	P-GEAD-527	data2.txt	1 uM DON luminal exposure-2
DON inj-3	DON inj-3	Mus musculus	10090	C57/BL6	Enteroid	1uM DON (luminal)	P0	SAMD00232162	Sample from 1 uM DON injected enteroid (luminal exposure) -replicate3	P-GEAD-523	P-GEAD-524	P-GEAD-525	DON inj-3	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	DON inj-3	DRX226084	DRR235899	sequencing assay	DRR235899	P-GEAD-527	data2.txt	1 uM DON luminal exposure-3
@@10@@DON med-1	DON med-1	Mus musculus	10090	C57/BL6	Enteroid	1uM DON (basolateral)	P0	SAMD00232163	Sample from enteroid treated with 1uM DON in culture medium (basolateral exposure) -replicate1	P-GEAD-523	P-GEAD-524	P-GEAD-525	DON med-1	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	DON med-1	DRX226085	DRR235900	sequencing assay	DRR235900	P-GEAD-527	data2.txt	1 uM DON basolateral exposure-1
@@11@@DON med-2	DON med-2	Mus musculus	10090	C57/BL6	Enteroid	1uM DON (basolateral)	P0	SAMD00232164	Sample from enteroid treated with 1uM DON in culture medium (basolateral exposure) -replicate2	P-GEAD-523	P-GEAD-524	P-GEAD-525	DON med-2	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	DON med-2	DRX226086	DRR235901	sequencing assay	DRR235901	P-GEAD-527	data2.txt	1 uM DON basolateral exposure-2
@@12@@DON med-3	DON med-3	Mus musculus	10090	C57/BL6	Enteroid	1uM DON (basolateral)	P0	SAMD00232165	Sample from enteroid treated with 1uM DON in culture medium (basolateral exposure) -replicate3	P-GEAD-523	P-GEAD-524	P-GEAD-525	DON med-3	total RNA	PAIRED	cDNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-526	DON med-3	DRX226087	DRR235902	sequencing assay	DRR235902	P-GEAD-527	data2.txt	1 uM DON basolateral exposure-3