Source Name Characteristics[sample_name] Characteristics[organism] Characteristics[taxonomy_id] Characteristics[biological_replicate] Characteristics[collection_date] Characteristics[age] Characteristics[chem_administration] Characteristics[disease] Characteristics[sample_type] Characteristics[sex] Characteristics[tissue] Comment[BioSample] Comment[sample_title] Comment[description] Protocol REF Protocol REF Protocol REF Extract Name Material Type Comment[LIBRARY_LAYOUT] Comment[LIBRARY_SELECTION] Comment[LIBRARY_SOURCE] Comment[LIBRARY_STRATEGY] Comment[INSTRUMENT_MODEL] Protocol REF Assay Name Comment[SRA_EXPERIMENT] Comment[SRA_RUN] Technology Type Array Data File Protocol REF Derived Array Data File Factor Value[treatment] S1127ctrl S1127ctrl Homo sapiens 9606 biological_replicate_1 2019/11/27 38 no clear cell carcinoma primary cell female omentum SAMD00388546 HPMC_1 non-stimulated human peritoneal mesothelial cells_1 P-GEAD-895 P-GEAD-896 P-GEAD-897 S1127ctrl total RNA PAIRED cDNA TRANSCRIPTOMIC RNA_SEQ Illumina NovaSeq 6000 P-GEAD-898 S1127ctrl DRX294983 DRR305547 sequencing assay DRR305547 P-GEAD-899 1127ctrl.txt control S1127TGF S1127TGF Homo sapiens 9606 biological_replicate_1 2019/11/27 38 no clear cell carcinoma primary cell female omentum SAMD00388547 HPMC_1 treated with TGF-beta1 human peritoneal mesothelial cells_1 treated with TGF-beta1 P-GEAD-895 P-GEAD-896 P-GEAD-897 S1127TGF total RNA PAIRED cDNA TRANSCRIPTOMIC RNA_SEQ Illumina NovaSeq 6000 P-GEAD-898 S1127TGF DRX294984 DRR305548 sequencing assay DRR305548 P-GEAD-899 1127TGF.txt 10 ng /ml of TGF-beta1 S628ctrl S628ctrl Homo sapiens 9606 biological_replicate_2 2020/6/28 37 no mucinous carcinoma primary cell female omentum SAMD00388548 HPMC_2 non-stimulated human peritoneal mesothelial cells_2 P-GEAD-895 P-GEAD-896 P-GEAD-897 S628ctrl total RNA PAIRED cDNA TRANSCRIPTOMIC RNA_SEQ Illumina NovaSeq 6000 P-GEAD-898 S628ctrl DRX294985 DRR305549 sequencing assay DRR305549 P-GEAD-899 628ctrl.txt control S628TGF S628TGF Homo sapiens 9606 biological_replicate_2 2020/6/28 37 no mucinous carcinoma primary cell female omentum SAMD00388549 HPMC_2 treated with TGF-beta1 human peritoneal mesothelial cells_2 treated with TGF-beta1 P-GEAD-895 P-GEAD-896 P-GEAD-897 S628TGF total RNA PAIRED cDNA METAGENOMIC RNA_SEQ Illumina NovaSeq 6000 P-GEAD-898 S628TGF DRX294986 DRR305550 sequencing assay DRR305550 P-GEAD-899 628TGF.txt 10 ng /ml of TGF-beta1 S421ctrl S421ctrl Homo sapiens 9606 biological_replicate_3 2020/4/21 48 no serous borderline tumor primary cell female omentum SAMD00388550 HPMC_3 non-stimulated human peritoneal mesothelial cells_3 P-GEAD-895 P-GEAD-896 P-GEAD-897 S421ctrl total RNA PAIRED cDNA TRANSCRIPTOMIC RNA_SEQ Illumina NovaSeq 6000 P-GEAD-898 S421ctrl DRX294987 DRR305551 sequencing assay DRR305551 P-GEAD-899 421ctrl.txt control S421TGF S421TGF Homo sapiens 9606 biological_replicate_3 2020/4/21 48 no serous borderline tumor primary cell female omentum SAMD00388551 HPMC_3 treated with TGF-beta1 human peritoneal mesothelial cells_3 treated with TGF-beta1 P-GEAD-895 P-GEAD-896 P-GEAD-897 S421TGF total RNA PAIRED cDNA TRANSCRIPTOMIC RNA_SEQ Illumina NovaSeq 6000 P-GEAD-898 S421TGF DRX294988 DRR305552 sequencing assay DRR305552 P-GEAD-899 421TGF.txt 10 ng /ml of TGF-beta1