Source Name	Characteristics[sample_name]	Characteristics[organism]	Characteristics[taxonomy_id]	Characteristics[strain]	Characteristics[biological_replicate]	Characteristics[dev_stage]	Characteristics[genotype]	Characteristics[tissue]	Comment[BioSample]	Comment[sample_title]	Protocol REF	Protocol REF	Protocol REF	Extract Name	Material Type	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[INSTRUMENT_MODEL]	Protocol REF	Assay Name	Comment[SRA_EXPERIMENT]	Comment[SRA_RUN]	Technology Type	Array Data File	Protocol REF	Derived Array Data File	Factor Value[genotype]
EB1_Het	EB1_Het	Mus musculus	10090	"mixuture of C57BL/6J, C57BL/6N, and C3H/HeN"	1	E7.5	Mesp1 Dneo/+	whole embryo	SAMD00404559	"Whole embryo at Early Bud stage, Mesp1 Dneo/+, replicate1"	P-GEAD-938	P-GEAD-939	P-GEAD-940	EB1_Het	total RNA	SINGLE	Oligo-dT	TRANSCRIPTOMIC	RNA_SEQ	Illumina HiSeq 2500	P-GEAD-941	EB1_Het	DRX307726	DRR318370	sequencing assay	DRR318370	P-GEAD-942	EB_Het_vs_EB_KO_and_LB_Het_vs_LB_KO.txt	Mesp1 Dneo/+
EB2_Het	EB2_Het	Mus musculus	10090	"mixuture of C57BL/6J, C57BL/6N, and C3H/HeN"	2	E7.5	Mesp1 Dneo/+	whole embryo	SAMD00404560	"Whole embryo at Early Bud stage, Mesp1 Dneo/+, replicate2"	P-GEAD-938	P-GEAD-939	P-GEAD-940	EB2_Het	total RNA	SINGLE	Oligo-dT	TRANSCRIPTOMIC	RNA_SEQ	Illumina HiSeq 2500	P-GEAD-941	EB2_Het	DRX307727	DRR318371	sequencing assay	DRR318371	P-GEAD-942	EB_Het_vs_EB_KO_and_LB_Het_vs_LB_KO.txt	Mesp1 Dneo/+
EB3_KO	EB3_KO	Mus musculus	10090	"mixuture of C57BL/6J, C57BL/6N, and C3H/HeN"	1	E7.5	Mesp1 Dneo/Dneo	whole embryo	SAMD00404561	"Whole embryo at Early Bud stage, Mesp1 Dneo/Dneo, replicate1"	P-GEAD-938	P-GEAD-939	P-GEAD-940	EB3_KO	total RNA	SINGLE	Oligo-dT	TRANSCRIPTOMIC	RNA_SEQ	Illumina HiSeq 2500	P-GEAD-941	EB3_KO	DRX307728	DRR318372	sequencing assay	DRR318372	P-GEAD-942	EB_Het_vs_EB_KO_and_LB_Het_vs_LB_KO.txt	Mesp1 Dneo/Dneo
EB4_KO	EB4_KO	Mus musculus	10090	"mixuture of C57BL/6J, C57BL/6N, and C3H/HeN"	2	E7.5	Mesp1 Dneo/Dneo	whole embryo	SAMD00404562	Whole embryo at Early Bud stage, Mesp1 Dneo/Dneo, replicate2	P-GEAD-938	P-GEAD-939	P-GEAD-940	EB4_KO	total RNA	SINGLE	Oligo-dT	TRANSCRIPTOMIC	RNA_SEQ	Illumina HiSeq 2500	P-GEAD-941	EB4_KO	DRX307729	DRR318373	sequencing assay	DRR318373	P-GEAD-942	EB_Het_vs_EB_KO_and_LB_Het_vs_LB_KO.txt	Mesp1 Dneo/Dneo
LB1_Het	LB1_Het	Mus musculus	10090	mixuture of C57BL/6J, C57BL/6N, and C3H/HeN	1	E7.5	Mesp1 Dneo/+	whole embryo	SAMD00404563	Whole embryo at Late Bud stage, Mesp1 Dneo/+, replicate1	P-GEAD-938	P-GEAD-939	P-GEAD-940	LB1_Het	total RNA	SINGLE	Oligo-dT	TRANSCRIPTOMIC	RNA_SEQ	Illumina HiSeq 2500	P-GEAD-941	LB1_Het	DRX307730	DRR318374	sequencing assay	DRR318374	P-GEAD-942	EB_Het_vs_EB_KO_and_LB_Het_vs_LB_KO.txt	Mesp1 Dneo/+
LB2_Het	LB2_Het	Mus musculus	10090	mixuture of C57BL/6J, C57BL/6N, and C3H/HeN	2	E7.5	Mesp1 Dneo/+	whole embryo	SAMD00404564	Whole embryo at Late Bud stage, Mesp1 Dneo/+, replicate2	P-GEAD-938	P-GEAD-939	P-GEAD-940	LB2_Het	total RNA	SINGLE	Oligo-dT	TRANSCRIPTOMIC	RNA_SEQ	Illumina HiSeq 2500	P-GEAD-941	LB2_Het	DRX307731	DRR318375	sequencing assay	DRR318375	P-GEAD-942	EB_Het_vs_EB_KO_and_LB_Het_vs_LB_KO.txt	Mesp1 Dneo/+
LB3_KO	LB3_KO	Mus musculus	10090	mixuture of C57BL/6J, C57BL/6N, and C3H/HeN	1	E7.5	Mesp1 Dneo/Dneo	whole embryo	SAMD00404565	Whole embryo at Late Bud stage, Mesp1 Dneo/Dneo, replicate1	P-GEAD-938	P-GEAD-939	P-GEAD-940	LB3_KO	total RNA	SINGLE	Oligo-dT	TRANSCRIPTOMIC	RNA_SEQ	Illumina HiSeq 2500	P-GEAD-941	LB3_KO	DRX307732	DRR318376	sequencing assay	DRR318376	P-GEAD-942	EB_Het_vs_EB_KO_and_LB_Het_vs_LB_KO.txt	Mesp1 Dneo/Dneo
LB4_KO	LB4_KO	Mus musculus	10090	mixuture of C57BL/6J, C57BL/6N, and C3H/HeN	2	E7.5	Mesp1 Dneo/Dneo	whole embryo	SAMD00404566	Whole embryo at Late Bud stage, Mesp1 Dneo/Dneo, replicate2	P-GEAD-938	P-GEAD-939	P-GEAD-940	LB4_KO	total RNA	SINGLE	Oligo-dT	TRANSCRIPTOMIC	RNA_SEQ	Illumina HiSeq 2500	P-GEAD-941	LB4_KO	DRX307733	DRR318377	sequencing assay	DRR318377	P-GEAD-942	EB_Het_vs_EB_KO_and_LB_Het_vs_LB_KO.txt	Mesp1 Dneo/Dneo