Source Name	Characteristics[sample_name]	Characteristics[organism]	Characteristics[taxonomy_id]	Characteristics[biological_replicate]	Characteristics[genotype]	Characteristics[treatment]	Comment[BioSample]	Comment[sample_title]	Protocol REF	Protocol REF	Protocol REF	Extract Name	Material Type	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[INSTRUMENT_MODEL]	Protocol REF	Assay Name	Comment[SRA_EXPERIMENT]	Comment[SRA_RUN]	Technology Type	Array Data File	Protocol REF	Derived Array Data File	Factor Value[genotype]	Factor Value[compound]	Factor Value[dose]	Unit[mass density unit]
Paracoccus denitrificans WT control for MMC treatment rep 1	Paracoccus denitrificans WT control for MMC treatment rep 1	Paracoccus denitrificans PD1222	318586	1	WT	Mock	SAMD00414534	Paracoccus denitrificans WT control for MMC treatment, biological replicate 1	P-GEAD-984	P-GEAD-985	P-GEAD-986	Paracoccus denitrificans WT control for MMC treatment rep 1	total RNA	PAIRED	Inverse rRNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-987	Paracoccus denitrificans WT control for MMC treatment rep 1	DRX316497	DRR327458	sequencing assay	DRR327458	P-GEAD-988	WT_Ctrl_1_RawCount.txt	wild type	none	0	nanogram per milliliter
Paracoccus denitrificans WT control for MMC treatment rep 2	Paracoccus denitrificans WT control for MMC treatment rep 2	Paracoccus denitrificans PD1222	318586	2	WT	Mock	SAMD00414535	Paracoccus denitrificans WT control for MMC treatment, biological replicate 2	P-GEAD-984	P-GEAD-985	P-GEAD-986	Paracoccus denitrificans WT control for MMC treatment rep 2	total RNA	PAIRED	Inverse rRNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-987	Paracoccus denitrificans WT control for MMC treatment rep 2	DRX316498	DRR327459	sequencing assay	DRR327459	P-GEAD-988	WT_Ctrl_2_RawCount.txt	wild type	none	0	nanogram per milliliter
Paracoccus denitrificans WT MMC treatment rep 1	Paracoccus denitrificans WT MMC treatment rep 1	Paracoccus denitrificans PD1222	318586	1	WT	MMC	SAMD00414536	Paracoccus denitrificans WT MMC treatment , biological replicate 1	P-GEAD-984	P-GEAD-985	P-GEAD-986	Paracoccus denitrificans WT MMC treatment rep 1	total RNA	PAIRED	Inverse rRNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-987	Paracoccus denitrificans WT MMC treatment rep 1	DRX316499	DRR327460	sequencing assay	DRR327460	P-GEAD-988	WT_MMC_1_RawCount.txt	wild type	mytomycin C	10	nanogram per milliliter
Paracoccus denitrificans WT MMC treatment rep 2	Paracoccus denitrificans WT MMC treatment rep 2	Paracoccus denitrificans PD1222	318586	2	WT	MMC	SAMD00414537	Paracoccus denitrificans WT MMC treatment, biological replicate 2	P-GEAD-984	P-GEAD-985	P-GEAD-986	Paracoccus denitrificans WT MMC treatment rep 2	total RNA	PAIRED	Inverse rRNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-987	Paracoccus denitrificans WT MMC treatment rep 2	DRX316500	DRR327461	sequencing assay	DRR327461	P-GEAD-988	WT_MMC_2_RawCount.txt	wild type	mytomycin C	10	nanogram per milliliter
Paracoccus denitrificans recA control for MMC treatment rep 1	Paracoccus denitrificans recA control for MMC treatment rep 1	Paracoccus denitrificans PD1222	318586	1	recA	Mock	SAMD00414538	Paracoccus denitrificans recA control for MMC treatment, biological replicate 1	P-GEAD-984	P-GEAD-985	P-GEAD-986	Paracoccus denitrificans recA control for MMC treatment rep 1	total RNA	PAIRED	Inverse rRNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-987	Paracoccus denitrificans recA control for MMC treatment rep 1	DRX316501	DRR327462	sequencing assay	DRR327462	P-GEAD-988	recA_Ctrl_1_RawCount.txt	recA	none	0	nanogram per milliliter
Paracoccus denitrificans recA control for MMC treatment rep 2	Paracoccus denitrificans recA control for MMC treatment rep 2	Paracoccus denitrificans PD1222	318586	2	recA	Mock	SAMD00414539	Paracoccus denitrificans recA control for MMC treatment, biological replicate 2	P-GEAD-984	P-GEAD-985	P-GEAD-986	Paracoccus denitrificans recA control for MMC treatment rep 2	total RNA	PAIRED	Inverse rRNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-987	Paracoccus denitrificans recA control for MMC treatment rep 2	DRX316502	DRR327463	sequencing assay	DRR327463	P-GEAD-988	recA_Ctrl_2_RawCount.txt	recA	none	0	nanogram per milliliter
Paracoccus denitrificans recA MMC treatment rep 1	Paracoccus denitrificans recA MMC treatment rep 1	Paracoccus denitrificans PD1222	318586	1	recA	MMC	SAMD00414533	Paracoccus denitrificans recA MMC treatment, biological replicate 1	P-GEAD-984	P-GEAD-985	P-GEAD-986	Paracoccus denitrificans recA MMC treatment rep 1	total RNA	PAIRED	Inverse rRNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-987	Paracoccus denitrificans recA MMC treatment rep 1	DRX316503	DRR327464	sequencing assay	DRR327464	P-GEAD-988	recA_MMC_1_RawCount.txt	recA	mytomycin C	10	nanogram per milliliter
Paracoccus denitrificans recA MMC treatment rep 2	Paracoccus denitrificans recA MMC treatment rep 2	Paracoccus denitrificans PD1222	318586	2	recA	MMC	SAMD00414540	Paracoccus denitrificans recA MMC treatment, biological replicate 2	P-GEAD-984	P-GEAD-985	P-GEAD-986	Paracoccus denitrificans recA MMC treatment rep 2	total RNA	PAIRED	Inverse rRNA	TRANSCRIPTOMIC	RNA_SEQ	Illumina NovaSeq 6000	P-GEAD-987	Paracoccus denitrificans recA MMC treatment rep 2	DRX316504	DRR327465	sequencing assay	DRR327465	P-GEAD-988	recA_MMC_2_RawCount.txt	recA	mytomycin C	10	nanogram per milliliter