Source Name	Characteristics[sample_name]	Characteristics[organism]	Characteristics[taxonomy_id]	Characteristics[biological_replicate]	Characteristics[biomaterial_provider]	Characteristics[collection_date]	Characteristics[geo_loc_name]	Characteristics[cell_line]	Characteristics[cell_type]	Characteristics[chem_administration]	Characteristics[passage_history]	Comment[BioSample]	Comment[sample_title]	Comment[description]	Protocol REF	Protocol REF	Protocol REF	Extract Name	Material Type	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[INSTRUMENT_MODEL]	Protocol REF	Assay Name	Comment[SRA_EXPERIMENT]	Comment[SRA_RUN]	Technology Type	Array Data File	Protocol REF	Derived Array Data File	Factor Value[chem_administration]
hESCs_p53WT_DMSO_rep1	hESCs_p53WT_DMSO_rep1	Homo sapiens	9606	#1	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	DMSO for 24h	passage 20	SAMD00770399	hESCs, p53WT; DMSO treatment for 24h as control of genotoxic stress, rep1	hESCs, p53WT; control for genotoxic stress, biological replicate 1	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53WT_DMSO_rep1	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53WT_DMSO_rep1	DRX529952	DRR546174	sequencing assay	DRR546174	P-GEAD-2513	1_KhES1_WT_DMSO_1_24h_ATACseq_sorted.ucsc.bigwig	DMSO for 24h
hESCs_p53WT_DMSO_rep2	hESCs_p53WT_DMSO_rep2	Homo sapiens	9606	#2	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	DMSO for 24h	passage 20	SAMD00770400	hESCs, p53WT; DMSO treatment for 24h as control of genotoxic stress, rep2	hESCs, p53WT; control for genotoxic stress, biological replicate 2	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53WT_DMSO_rep2	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53WT_DMSO_rep2	DRX529953	DRR546175	sequencing assay	DRR546175	P-GEAD-2513	2_KhES1_WT_DMSO_2_24h_ATACseq_sorted.ucsc.bigwig	DMSO for 24h
hESCs_p53WT_5FU_24h_rep1	hESCs_p53WT_5FU_24h_rep1	Homo sapiens	9606	#1	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	1mM 5-FU for 24h	passage 20	SAMD00770401	hESCs, p53WT; 5-FU treatment for 24h as genotoxic stress, rep1	hESCs, p53WT; 5-FU treatment for genotoxic stress, biological replicate 1	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53WT_5FU_24h_rep1	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53WT_5FU_24h_rep1	DRX529954	DRR546176	sequencing assay	DRR546176	P-GEAD-2513	3_KhES1_WT_DMSO_24h_p53ChIP_1_sorted.ucsc.bigwig	1mM 5-FU for 24h
hESCs_p53WT_5FU_24h_rep2	hESCs_p53WT_5FU_24h_rep2	Homo sapiens	9606	#2	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	1mM 5-FU for 24h	passage 20	SAMD00770402	hESCs, p53WT; 5-FU treatment for 24h as genotoxic stress, rep2	hESCs, p53WT; 5-FU treatment for genotoxic stress, biological replicate 2	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53WT_5FU_24h_rep2	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53WT_5FU_24h_rep2	DRX529955	DRR546177	sequencing assay	DRR546177	P-GEAD-2513	4_KhES1_WT_5FU_2_24h_ATACseq_sorted.ucsc.bigwig	1mM 5-FU for 24h
hESCs_p53WT_ADR_8h_rep1	hESCs_p53WT_ADR_8h_rep1	Homo sapiens	9606	#1	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	0.5uM ADR for 8h	passage 20	SAMD00770403	hESCs, p53WT; ADR treatment for 8h as genotoxic stress, rep1	hESCs, p53WT; ADR treatment for genotoxic stress, biological replicate 1	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53WT_ADR_8h_rep1	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53WT_ADR_8h_rep1	DRX529956	DRR546178	sequencing assay	DRR546178	P-GEAD-2513	5_KhES1_WT_ADR_1_8h_ATACseq_sorted.ucsc.bigwig	0.5uM ADR for 8h
hESCs_p53WT_ADR_8h_rep2	hESCs_p53WT_ADR_8h_rep2	Homo sapiens	9606	#2	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	0.5uM ADR for 8h	passage 20	SAMD00770404	hESCs, p53WT; ADR treatment for 8h as genotoxic stress, rep2	hESCs, p53WT; ADR treatment for genotoxic stress, biological replicate 2	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53WT_ADR_8h_rep2	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53WT_ADR_8h_rep2	DRX529957	DRR546179	sequencing assay	DRR546179	P-GEAD-2513	6_KhES1_WT_ADR_2_8h_ATACseq_sorted.ucsc.bigwig	0.5uM ADR for 8h
hESCs_p53WT_DNR_8h_rep1	hESCs_p53WT_DNR_8h_rep1	Homo sapiens	9606	#1	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	0.5uM DNR for 8h	passage 20	SAMD00770405	hESCs, p53WT; DNR treatment for 8h as genotoxic stress, rep1	hESCs, p53WT;DNR treatment for genotoxic stress, biological replicate 1	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53WT_DNR_8h_rep1	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53WT_DNR_8h_rep1	DRX529958	DRR546180	sequencing assay	DRR546180	P-GEAD-2513	7_KhES1_WT_DNR_1_8h_ATACseq_sorted.ucsc.bigwig	0.5uM DNR for 8h
hESCs_p53WT_DNR_8h_rep2	hESCs_p53WT_DNR_8h_rep2	Homo sapiens	9606	#2	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	0.5uM DNR for 8h	passage 20	SAMD00770406	hESCs, p53WT; DNR treatment for 8h as genotoxic stress, rep2	hESCs, p53WT; DNR treatment for genotoxic stress, biological replicate 2	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53WT_DNR_8h_rep2	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53WT_DNR_8h_rep2	DRX529959	DRR546181	sequencing assay	DRR546181	P-GEAD-2513	8_KhES1_WT_DNR_2_8h_ATACseq_sorted.ucsc.bigwig	0.5uM DNR for 8h
hESCs_p53KO_DMSO_rep1	hESCs_p53KO_DMSO_rep1	Homo sapiens	9606	#1	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	DMSO for 24h	passage 20	SAMD00770407	hESCs, p53KO; DMSO treatment for 24h as control of genotoxic stress, rep1	hESCs, p53KO; control for genotoxic stress, biological replicate 1	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53KO_DMSO_rep1	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53KO_DMSO_rep1	DRX529960	DRR546182	sequencing assay	DRR546182	P-GEAD-2513	9_KhES1_p53KO_DMSO_1_24h_ATACseq_sorted.ucsc.bigwig	DMSO for 24h
@@10@@hESCs_p53KO_DMSO_rep2	hESCs_p53KO_DMSO_rep2	Homo sapiens	9606	#2	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	DMSO for 24h	passage 20	SAMD00770408	hESCs, p53KO; DMSO treatment for 24h as control of genotoxic stress, rep2	hESCs, p53KO; control for genotoxic stress, biological replicate 2	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53KO_DMSO_rep2	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53KO_DMSO_rep2	DRX529961	DRR546183	sequencing assay	DRR546183	P-GEAD-2513	10_KhES1_p53KO_DMSO_2_24h_ATACseq_sorted.ucsc.bigwig	DMSO for 24h
@@11@@hESCs_p53KO_5FU_24h_rep1	hESCs_p53KO_5FU_24h_rep1	Homo sapiens	9606	#1	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	1mM 5-FU for 24h	passage 20	SAMD00770409	hESCs, p53KO; 5-FU treatment for 24h as genotoxic stress, rep1	hESCs, p53KO; 5-FU treatment for genotoxic stress, biological replicate 1	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53KO_5FU_24h_rep1	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53KO_5FU_24h_rep1	DRX529962	DRR546184	sequencing assay	DRR546184	P-GEAD-2513	11_KhES1_p53KO_5FU_1_24h_ATACseq_sorted.ucsc.bigwig	1mM 5-FU for 24h
@@12@@hESCs_p53KO_5FU_24h_rep2	hESCs_p53KO_5FU_24h_rep2	Homo sapiens	9606	#2	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	1mM 5-FU for 24h	passage 20	SAMD00770410	hESCs, p53KO; 5-FU treatment for 24h as genotoxic stress, rep2	hESCs, p53KO; 5-FU treatment for genotoxic stress, biological replicate 2	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53KO_5FU_24h_rep2	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53KO_5FU_24h_rep2	DRX529963	DRR546185	sequencing assay	DRR546185	P-GEAD-2513	12_KhES1_p53KO_5FU_2_24h_ATACseq_sorted.ucsc.bigwig	1mM 5-FU for 24h
@@13@@hESCs_p53KO_ADR_8h_rep1	hESCs_p53KO_ADR_8h_rep1	Homo sapiens	9606	#1	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	0.5uM ADR for 8h	passage 20	SAMD00770411	hESCs, p53KO; ADR treatment for 8h as genotoxic stress, rep1	hESCs, p53KO; ADR treatment for genotoxic stress, biological replicate 1	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53KO_ADR_8h_rep1	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53KO_ADR_8h_rep1	DRX529964	DRR546186	sequencing assay	DRR546186	P-GEAD-2513	13_KhES1_p53KO_ADR_1_8h_ATACseq_sorted.ucsc.bigwig	0.5uM ADR for 8h
@@14@@hESCs_p53KO_ADR_8h_rep2	hESCs_p53KO_ADR_8h_rep2	Homo sapiens	9606	#2	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	0.5uM ADR for 8h	passage 20	SAMD00770412	hESCs, p53KO; ADR treatment for 8h as genotoxic stress, rep2	hESCs, p53KO; ADR treatment for genotoxic stress, biological replicate 2	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53KO_ADR_8h_rep2	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53KO_ADR_8h_rep2	DRX529965	DRR546187	sequencing assay	DRR546187	P-GEAD-2513	14_KhES1_p53KO_ADR_2_8h_ATACseq_sorted.ucsc.bigwig	0.5uM ADR for 8h
@@15@@hESCs_p53KO_DNR_8h_rep1	hESCs_p53KO_DNR_8h_rep1	Homo sapiens	9606	#1	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	0.5uM DNR for 8h	passage 20	SAMD00770413	hESCs, p53KO; DNR treatment for 8h as genotoxic stress, rep1	hESCs, p53KO;DNR treatment for genotoxic stress, biological replicate 1	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53KO_DNR_8h_rep1	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53KO_DNR_8h_rep1	DRX529966	DRR546188	sequencing assay	DRR546188	P-GEAD-2513	15_KhES1_p53KO_DNR_1_8h_ATACseq_sorted.ucsc.bigwig	0.5uM DNR for 8h
@@16@@hESCs_p53KO_DNR_8h_rep2	hESCs_p53KO_DNR_8h_rep2	Homo sapiens	9606	#2	RIKEN BRC	2020-10-01	Japan	KhES1	human Embryonic stem cells	0.5uM DNR for 8h	passage 20	SAMD00770414	hESCs, p53KO; DNR treatment for 8h as genotoxic stress, rep2	hESCs, p53KO; DNR treatment for genotoxic stress, biological replicate 2	P-GEAD-2509	P-GEAD-2510	P-GEAD-2511	hESCs_p53KO_DNR_8h_rep2	total RNA	SINGLE	other	GENOMIC	ATAC_SEQ	Illumina HiSeq 1500	P-GEAD-2512	hESCs_p53KO_DNR_8h_rep2	DRX529967	DRR546189	sequencing assay	DRR546189	P-GEAD-2513	16_KhES1_p53KO_DNR_2_8h_ATACseq_sorted.ucsc.bigwig	0.5uM DNR for 8h