Source Name	Characteristics[sample_name]	Characteristics[organism]	Characteristics[taxonomy_id]	Characteristics[strain]	Characteristics[collection_date]	Characteristics[geo_loc_name]	Characteristics[age]	Characteristics[sex]	Characteristics[tissue]	Comment[BioSample]	Comment[sample_title]	Protocol REF	Protocol REF	Protocol REF	Extract Name	Material Type	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[INSTRUMENT_MODEL]	Protocol REF	Assay Name	Comment[SRA_EXPERIMENT]	Comment[SRA_RUN]	Technology Type	Array Data File	Protocol REF	Derived Array Data File	Factor Value[manipulation]	Factor Value[epigenome]	Factor Value[replicate]
Oil_1_H3K27ac	Oil_1_H3K27ac	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845405	H3K27ac CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with only oil with FACS, rep 1	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Oil_1_H3K27ac	genomic DNA	PAIRED	other	GENOMIC	OTHER	NextSeq 2000	P-GEAD-3393	Oil_1_H3K27ac	DRX600164	DRR619812	sequencing assay	DRR619812	P-GEAD-3394	5763_7_Oil_1_K27ac_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Oil	H3K27ac	1
Oil_2_H3K27ac	Oil_2_H3K27ac	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845406	H3K27ac CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with only oil with FACS, rep 2	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Oil_2_H3K27ac	genomic DNA	PAIRED	other	GENOMIC	OTHER	NextSeq 2000	P-GEAD-3393	Oil_2_H3K27ac	DRX600165	DRR619813	sequencing assay	DRR619813	P-GEAD-3394	5763_9_Oil_2_K27ac_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Oil	H3K27ac	2
Oil_3_H3K27ac	Oil_3_H3K27ac	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845407	H3K27ac CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with only oil with FACS, rep 3	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Oil_3_H3K27ac	genomic DNA	PAIRED	other	GENOMIC	OTHER	NextSeq 2000	P-GEAD-3393	Oil_3_H3K27ac	DRX600166	DRR619814	sequencing assay	DRR619814	P-GEAD-3394	5763_11_Oil_3_K27ac_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Oil	H3K27ac	3
Tam_1_H3K27ac	Tam_1_H3K27ac	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845408	H3K27ac CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with tamoxifen in oil with FACS, rep 1	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Tam_1_H3K27ac	genomic DNA	PAIRED	other	GENOMIC	OTHER	NextSeq 2000	P-GEAD-3393	Tam_1_H3K27ac	DRX600167	DRR619815	sequencing assay	DRR619815	P-GEAD-3394	5763_8_Tam_1_K27ac_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Tamoxifen	H3K27ac	1
Tam_2_H3K27ac	Tam_2_H3K27ac	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845409	H3K27ac CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with tamoxifen in oil with FACS, rep 2	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Tam_2_H3K27ac	genomic DNA	PAIRED	other	GENOMIC	OTHER	NextSeq 2000	P-GEAD-3393	Tam_2_H3K27ac	DRX600168	DRR619816	sequencing assay	DRR619816	P-GEAD-3394	5763_10_Tam_2_K27ac_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Tamoxifen	H3K27ac	2
Tam_3_H3K27ac	Tam_3_H3K27ac	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845410	H3K27ac CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with tamoxifen in oil with FACS, rep 3	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Tam_3_H3K27ac	genomic DNA	PAIRED	other	GENOMIC	OTHER	NextSeq 2000	P-GEAD-3393	Tam_3_H3K27ac	DRX600169	DRR619817	sequencing assay	DRR619817	P-GEAD-3394	5763_12_Tam_3_K27ac_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Tamoxifen	H3K27ac	3
Oil_1_ATAC	Oil_1_ATAC	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845411	ATAC CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with only oil with FACS, rep 1	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Oil_1_ATAC	genomic DNA	PAIRED	other	GENOMIC	ATAC_SEQ	NextSeq 2000	P-GEAD-3393	Oil_1_ATAC	DRX600170	DRR619818	sequencing assay	DRR619818	P-GEAD-3394	5764_1_Oil_1_ATAC_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Oil	ATAC	1
Oil_2_ATAC	Oil_2_ATAC	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845412	ATAC CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with only oil with FACS, rep 2	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Oil_2_ATAC	genomic DNA	PAIRED	other	GENOMIC	ATAC_SEQ	NextSeq 2000	P-GEAD-3393	Oil_2_ATAC	DRX600171	DRR619819	sequencing assay	DRR619819	P-GEAD-3394	5764_3_Oil_2_ATAC_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Oil	ATAC	2
Oil_3_ATAC	Oil_3_ATAC	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845413	ATAC CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with only oil with FACS, rep 3	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Oil_3_ATAC	genomic DNA	PAIRED	other	GENOMIC	ATAC_SEQ	NextSeq 2000	P-GEAD-3393	Oil_3_ATAC	DRX600172	DRR619820	sequencing assay	DRR619820	P-GEAD-3394	5764_5_Oil_3_ATAC_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Oil	ATAC	3
Tam_1_ATAC	Tam_1_ATAC	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845414	ATAC CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with tamoxifen in oil with FACS, rep 1	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Tam_1_ATAC	genomic DNA	PAIRED	other	GENOMIC	ATAC_SEQ	NextSeq 2000	P-GEAD-3393	Tam_1_ATAC	DRX600173	DRR619821	sequencing assay	DRR619821	P-GEAD-3394	5764_2_Tam_1_ATAC_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Tamoxifen	ATAC	1
Tam_2_ATAC	Tam_2_ATAC	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845415	ATAC CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with tamoxifen in oil with FACS, rep 2	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Tam_2_ATAC	genomic DNA	PAIRED	other	GENOMIC	ATAC_SEQ	NextSeq 2000	P-GEAD-3393	Tam_2_ATAC	DRX600174	DRR619822	sequencing assay	DRR619822	P-GEAD-3394	5764_4_Tam_2_ATAC_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Tamoxifen	ATAC	2
Tam_3_ATAC	Tam_3_ATAC	Mus musculus	10090	Cx3cr1tm2.1(cre/ERT2)Litt	2024-10	Japan:Fukuoka	3 months old	pooled male and female	brain	SAMD00845416	ATAC CUT&Tag of CD11b+ CD45+ Ly6G- CD206- microglia isolated from the brain of 3 months old male and female Cx3cr1tm2.1(cre/ERT2)Litt mice injected with tamoxifen in oil with FACS, rep 3	P-GEAD-3390	P-GEAD-3391	P-GEAD-3392	Tam_3_ATAC	genomic DNA	PAIRED	other	GENOMIC	ATAC_SEQ	NextSeq 2000	P-GEAD-3393	Tam_3_ATAC	DRX600175	DRR619823	sequencing assay	DRR619823	P-GEAD-3394	5764_6_Tam_3_ATAC_cutadapt_unique_sorted_dedup_rmblack_normCPM.bw	Tamoxifen	ATAC	3