DNA Data Bank of Japan DNA Database Release 103.0, Dec. 2015, including 189,264,014 entries, 204,119,485,393 bases Last published date in the present release: November 27, 2015 ------------------------------------------------------------------------------- Table of contents ------------------------------------------------------------------------------- 1. Introduction 1.1. Announcement for changes in the present release 1.2. Announcement for the forthcoming changes 2. DDBJ flat file format 2.1. LOCUS line 2.2. DEFINITION line 2.3. ACCESSION line 2.4. VERSION line 2.5. KEYWORDS line 2.6. SOURCE line 2.7. REFERENCE line 2.8. COMMENT line 2.9. FEATURES line 2.10. BASE COUNT line 2.11. ORIGIN line 3. Division categories 3.1. Notice for patent related sequence data 4. Citation 5. DDBJ staff 6. Acknowledgment 7. Disclaimer 8. File categories 9. Sample of the contents in each file 9.1. Part of the contents in the file 'ddbjbct1.seq' 9.2. Part of the contents in the accession number index file 'ddbjacc1.idx' 9.3. Part of the contents in the gene name index 'ddbjgen1.idx' 10. Release history 11. File list ------------------------------------------------------------------------------- 1. Introduction The present release contains the newest data prepared by the DNA Data Bank of Japan (DDBJ), GenBank (*), and EMBL-Bank/European Bioinformatics Institute (EMBL-Bank/EBI) as of November 27, 2015. This unified database was made possible thanks to the international collaboration among the three data banks. All the entries have accordingly been annotated using the feature keys common to them. In 2005, DDBJ, EMBL-Bank and GenBank agreed to call their collaboration "the International Nucleotide Sequence Database Collaboration (INSDC); http://www.insdc.org" and to call the unified nucleotide sequence database "the International Nucleotide Sequence Database (INSD)". *'GenBank' is a trademark of NIH, USA, and is operated by National Center for Biotechnology Information (NCBI) at NIH. 1.1. Announcement for changes in the present release Revision of the DDBJ/EMBL/GenBank Feature Table: Definition: Following the agreement at the INSD collaborative meeting in 2015, the document, DDBJ/EMBL/GenBank Feature Table: Definition, was revised. See also '2.9. FEATURES line' below. The revised points are introduced in advance on the following URL; http://www.ddbj.nig.ac.jp/insdc/icm2015-e.html#ft 1.2. Announcement for the forthcoming changes Nothing particular. 2. DDBJ flat file format The database is a collection of "entry" which is the unit of the data. The entries submitted to databanks were processed and publicized according to the DDBJ format for distribution (flat file). The flat file includes the sequence and the information of submitters, references, source organisms, and "feature" information, etc. The items of the DDBJ flat file are explained at following; ------------------------------------------------------------------------------- LOCUS AB000000 450 bp mRNA linear HUM 08-JUL-2002 DEFINITION Homo sapiens GAPD mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds. ACCESSION AB000000 VERSION AB000000.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 450) AUTHORS Mishima,H. and Shizuoka,T. TITLE Direct Submission JOURNAL Submitted (30-NOV-2000) to the DDBJ/EMBL/GenBank databases. Contact:Hanako Mishima National Institute of Genetics, DNA Data Bank of Japan; 1111, Yata, Mishima, Shizuoka 411-8540, Japan REFERENCE 2 AUTHORS Mishima,H., Shizuoka,T. and Fuji,I. TITLE Glyceraldehyde-3-phosphate dehydrogenase expressed in human liver JOURNAL Unpublished (2002) COMMENT Human cDNA sequencing project. FEATURES Location/Qualifiers source 1..450 /chromosome="12" /clone="GT200015" /clone_lib="lambda gt11 human liver cDNA (GeneTech. No.20)" /map="12p13" /mol_type="mRNA" /organism="Homo sapiens" /tissue_type="liver" CDS 86..>450 /codon_start=1 /gene="GAPD" /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="BAA12345.1" /transl_table=1 /translation="MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMT YMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPKEIPWGETSAEFVVEYTG VFTDKDKAVAQLKGGAKKV" BASE COUNT 102 a 119 c 131 g 98 t ORIGIN 1 cccacgcgtc cggtcgcatc gcacttgtag ctctcgaccc ccgcatctca tccctcctct 61 cgcttagttc agatcgaaat cgcaaatggc gaagattaag atcgggatca atgggttcgg 121 gaggatcggg aggctcgtgg ccagggtggc cctgcagagc gacgacgtcg agctcgtcgc 181 cgtcaacgac cccttcatca ccaccgacta catgacatac atgttcaagt atgacactgt 241 gcacggccag tggaagcatc atgaggttaa ggtgaaggac tccaagaccc ttctcttcgg 301 tgagaaggag gtcaccgtgt tcggctgcag gaaccctaag gagatcccat ggggtgagac 361 tagcgctgag tttgttgtgg agtacactgg tgttttcact gacaaggaca aggccgttgc 421 tcaacttaag ggtggtgcta agaaggtctg // ------------------------------------------------------------------------------- 2.1. LOCUS line The format of LOCUS line in the flat file is shown below; --------- -------- Positions Contents --------- -------- 01-05 'LOCUS' 06-12 spaces 13-28 Locus name 29-29 space 30-40 Length of sequence, right-justified 41-41 space 42-43 'bp' 44-47 spaces 48-54 DNA, RNA, mRNA, rRNA, tRNA or cRNA, left justified 55-55 space 56-63 'linear' followed by two spaces, or 'circular' 64-64 space 65-67 The division code (see '3.1. Division categories') 68-68 space 69-79 Date, in the form dd-MMM-yyyy (e.g., 08-JUL-2002) ------------------------------------------------------------------------------ 2.2. DEFINITION line The definition briefly describes the information of gene(s). "DEFINITION" is constructed by each of the three data banks. 2.3. ACCESSION line This line shows accession number of the entry data. A unique accession number is issued to the data submitted by each of the three data banks. The accession number is composed of 1 alphabet character and 5 digits (ex. A12345) or 2 alphabet characters and 6 digits (ex. AB123456). The former style was used in 1980s, but later the latter style was introduced because of data explosion. All the entries designated by the accession numbers with the prefixes given below have been collected and processed by DDBJ, and the rest have been done by GenBank and EMBL-Bank/EBI. ------------------------------------------------------------------------------- AB, AG, AK, AP, AT, AU, AV, BA, BB, BD, BJ, BP, BS, BW, BY, C, CI, CJ, D, DA DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, DL, DM, E, FS, FT, FU, FV, FW, FX, FY FZ, GA, GB, HV, HW, HX, HY, HZ, LA, LB, LC, LD, LE ------------------------------------------------------------------------------- You can find the list of the prefixes of the accession numbers at the following URL; http://www.ddbj.nig.ac.jp/sub/prefix.html If multiple entries are united to an entry, or if an entry is extensively modified after the submission, the responsible data banks may assign a new accession number to it. In these cases, the new accession number is called the primary accession number, and the old accession number(s) is/are called the secondary accession number(s). In the flat file, the primary accession number is indicated first, then the secondary accession number(s) follows. You can find the same updated entry with both the primary and the secondary accession numbers. 2.4. VERSION line This line consists of an accession number and a version number, like "AB123456.1", in which the digit(s) after the period is a version number. The data open to public for the first time is version number as "1". The reason for adding VERSION is that since a released sequence sometimes revised by the submitter, the accession number alone cannot specify the sequence in question causing the user a trouble. The number is increased by one every time when a revised sequence is made public. 2.5. KEYWORDS line The data banks describe this line, if necessary. In many cases, the categories of the data (EST, HTG etc.), gene names and product names included in "KEYWORDS". 2.6. SOURCE line This line shows the scientific name (and a corresponding common name, if defined as "Genbank common name" in taxonomy database) on organism from which the sequence is obtained and an organelle type if the sequence is derived from an organelle other than the nucleus. 2.7. REFERENCE line The information on the submitters and references related to the submitted sequence is indicated in REFERENCE line. 2.8. COMMENT line. The information about an entry that cannot be described using FEATURES or the other fields. 2.9. FEATURES line Biological features of a submitted sequence data are described with "Feature" key (the biological nature of the annotated feature), "Location" (the region of the sequence which corresponds to Feature), and "Qualifier" (supplementary information about Feature). The "Feature" and "Qualifier" keys used in the present release is defined by DDBJ/ENA/GenBank Feature Table Definition Version 10.5 (November, 2015). The document is continuously updated every year, in principle. You can find its newest version on URL; http://www.ddbj.nig.ac.jp/FT/full_index.html 2.10. BASE COUNT line In the BASE COUNT line of the DDBJ flat file, 9 digits are allocated for each number of a (adenine), c (cytosine), g (guanine) and t (thymine). In the case of RNA sequence, uracil is indicated as "t" according to the rule of the international nucleotide database. 2.11. ORIGIN line The sequence data starts from the next line of ORIGIN. The sequence is indicated as lower case letters, delimited by space per 10 bases, starts a new line by 60 bases. The numbers described at left side of lines mean the ordinal number of the top base of the line. 3. Division categories The present release is divided into 21 categories, called 'division', of organisms and others. The contents of the 21 divisions are shown in the following. See also '8. File categories' and '11. File list' below. HUM; human PRI; primates (other than human) ROD; rodents MAM; mammals (other than primates and rodents) VRT; vertebrates (other than mammals) INV; invertebrates (animals other than vertebrates) PLN; plants, fungi, plastids (eukaryotes other than animals) BCT; bacteria (including both Eubacteria and Archaea) VRL; viruses PHG; bacteriophages ENV; sequences obtained via environmental sampling methods SYN; synthetic constructs (artificially constructed sequences) EST; expressed sequence tags; short single pass cDNA sequences GSS; genome survey sequences; short single pass genomic sequences TSA; transcriptome shotgun assemblies HTC; high throughput cDNA sequences; The sequence submitted from cDNA sequencing projects except for EST. This division is to include unfinished high throughput cDNA sequences, each of which has 5'UTR and 3'UTR at both ends and part of a coding region. The sequence may also include introns. When the sequence becomes finished later, it moves to the corresponding taxonomic division. HTG; high throughput genomic sequences The sequence submitted mainly from genome sequencing projects which regarded a clone as a sequencing unit. STS; sequence tagged sites The tag site for genome sequencing. The information of chromosome, map, is mandatory for this division. PAT; sequence data related to patent applications The data those which the Japan Patent Office (JPO), United States Patent and Trademark Office (USPTO), the European Patent Office (EPO), and Korean Intellectual Property Office (KIPO) collected, processed and released. See also '3.1. Notice for patent related sequence data' below. UNA; the data not annotated The UNA division is not used for recently submitted sequences. CON; Contig / Constructed To conjugate a series of entries, such as those submitted from a genome project, each of the three data banks constructs an entry and assign an accession number to a large scale sequence dataset. Such entries are classified into the CON division. The entry in the CON division has the information of joined accession numbers instead of the sequence data. The corresponding entries of the CON entry have been submitted to other divisions. The entries and bases in the CON division are not counted in the released numbers given on the top of the release note. 3.1. Notice for patent related sequence data This release includes PAT division for patent related sequence data as described above. The data those which Japan Patent Office (JPO), United States Patent and Trademark Office (USPTO), European Patent Office (EPO), and Korean Intellectual Property Office (KIPO) collected, processed and released. Sequence data in patent claims to KIPO were properly processed and submitted to DDBJ by Byungwook Lee at Korean Bioinformation Center in collaboration with KIPO. The prefixes of accession numbers for the patent related sequence data are shown below; JPO : BD, DD, DJ, DL, DM, E, FU, FV, FW, FZ, GB, HV, HW, HZ KIPO : DI USPTO : AR, DZ, EA, GC, GP, GV, GX, GY, GZ, HJ, HK, I EPO : A, AX, CQ, CS, FB, GM, GN, HA, HB, HC, HD, HH, HI, JA, JB, JC, JD, JE Note also that unauthorized use of the patented data may cause legal issues for which DDBJ takes no responsibility. See also '7. Disclaimer'. 4. Citation When you use DDBJ in your research, we would appreciate it if you would include a reference to DDBJ in your publications related to your research. When citing an entry in the DDBJ database, it is appropriate to give its accession number. Also, it is recommended to cite the first publication in REFERENCE of the entry other than submitter information. DDBJ suggests authors add a reference for DDBJ itself. The following publication, which describes the recent activities of the DDBJ center, would be appropriate to be cited: Kodama Y, Mashima J, Kosuge T, Katayama T, Fujisawa T, Kaminuma E, Ogasawara O, Okubo K, Takagi T, and Nakamura Y. The DDBJ Japanese Genotype-phenotype Archive for genetic and phenotypic human data. Nucleic Acids Res. 43 (Database issue), D18-D22 (2015) DOI: 10.1093/nar/gku1120 The following sentence is an example to cite an entry in the DDBJ database: ----------------------------------------------------------------------------- "We searched the DDBJ database (1) by sequence similarities and found a nucleotide sequence (2), with DDBJ accession number AB000714, which had significant similarity with ..." (1) Kodama, Y. et al, Nucleic Acids Res. 43(Database issue), D18-D22 (2015). (2) Katahira, J. et al, J. Biol. Chem. 272, 26652-26658 (1997). ------------------------------------------------------------------------------ 5. DDBJ staff This release is published by the following DDBJ staff. Jun Mashima, Hideo Aono, Yuji Ashizawa, Yukino Dobashi, Mayumi Ejima, Masahiro Fujimoto, Asami Fukuda, Tomohiro Hirai, Naofumi Ishikawa, Chiharu Kawagoe, Yuichi Kodama, Junko Kohira, Takehide Kosuge, Kyungbum Lee, Mika Maki, Hisako Mashima, Fujitaka Matsumori, Kimiko Mimura, Hiroshi Miyazaki, Naoko Murakata, Satoshi Muraoka, Toshihisa Okido, Yoshihiro Okuda, Katsunaga Sakai, Yukie Sakon, Makoto Sato, Aimi Shiida, Rie Sugita, Kimiko Suzuki, Haru Tsutsui, Koji Watanabe, Tomohiko Yasuda, Emi Yokoyama, Masanori Arita, Eli Kaminuma, Osamu Ogasawara, Kosaku Okubo, Toshihisa Takagi, and Yasukazu Nakamura DNA Data Bank of Japan DDBJ Center National Institute of Genetics Research Organization of Information and Systems Mishima, 411-8540, Japan Phone: +81 55 981 6853 FAX: +81 55 981 6849 E-mail: ddbj@ddbj.nig.ac.jp (for general inquiry) ddbjsub@ddbj.nig.ac.jp (for data submission) ddbjupdt@ddbj.nig.ac.jp (for updates and notification of publication) WWW: http://www.ddbj.nig.ac.jp/ 6. Acknowledgment We are grateful to NCBI and EBI for a firm friendship and an excellent collaboration with us. We also thank JPO and KIPO for a steady cooperation with us. The operation of DDBJ is supported by the Ministry of Education, Culture, Sports, Science and Technology, and we would gratefully note this here. DDBJ uses the Super-SINET computer network for data collection, data exchange and various services. 7. Disclaimer While DDBJ endeavors to keep its data correct, DDBJ makes no representations or warranties of any kind about the completeness, accuracy or reliability with respect to the entries contained in the DDBJ periodical release. DDBJ also makes no legal liability or responsibility of merchantability or fitness for a particular purpose or that the use of the sequence data will not infringe any patent or other rights. Any receipt, reliance or use you place on such data is therefore strictly at your own risk. 8. File categories This release covers 21 categories (see also '3. Division categories'.) of organisms and others as follows: ------------------------------------------------------------------------------ ddbjbct; Category for bacteria ddbjcon; Category for CON (contigs) ddbjenv; Category for ENV (environmental samples) ddbjest; Category for EST (expressed sequence tags) ddbjgss; Category for GSS (genome survey sequences) ddbjhtc; Category for HTC (high throughput cDNA sequences) ddbjhtg; Category for HTG (high throughput genomic sequences) ddbjhum; Category for human ddbjinv; Category for invertebrates ddbjmam; Category for mammals other than primates and rodents ddbjpat; Category for patents ddbjphg; Category for phages ddbjpln; Category for plants ddbjpri; Category for primates other than human ddbjrod; Category for rodents ddbjsts; Category for STS (sequence tagged sites) ddbjsyn; Category for synthetic DNAs ddbjtsa; Category for TSA (transcriptome shotgun assemblies) ddbjuna; Category for unannotated sequences ddbjvrl; Category for viruses ddbjvrt; Category for vertebrates other than mammals ------------------------------------------------------------------------------ All of above in the present release are recorded in multiple ddbj***###.seq files, each of which at most has 1.5 GB storage capacity as follows, respectively. file prefix number of files ------------------------------- ddbjbct 33 ddbjcon 51 ddbjenv 14 ddbjest 168 ddbjgss 78 ddbjhtc 2 ddbjhtg 24 ddbjhum 7 ddbjinv 21 ddbjmam 5 ddbjpat 40 ddbjphg 1 ddbjpln 19 ddbjpri 2 ddbjrod 5 ddbjsts 4 ddbjsyn 2 ddbjtsa 31 ddbjuna 1 ddbjvrl 6 ddbjvrt 10 ------------------------------- The index files included in this release are ddbjacc#.idx and ddbjgen.idx. All of them are recorded in multiple ddbjacc#.idx files, each of which at most has 1.5 GB storage capacity. 9. Sample of the contents in each file 9.1. Part of the contents in the file 'ddbjbct1.seq' This shows all pieces of information on one entry in DDBJ format. ------------------------------------------------------------------------------ LOCUS D87069 993 bp mRNA linear BCT 05-OCT-2006 DEFINITION Escherichia coli mRNA for RNA polymerase sigma subunit, truncated form of sigma-38, complete cds. ACCESSION D87069 VERSION D87069.1 KEYWORDS RNA polymerase sigma subunit, truncated form of sigma-38. SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 993) AUTHORS Jishage,M. TITLE Direct Submission JOURNAL Submitted (14-AUG-1996) to the DDBJ/EMBL/GenBank databases. Contact:Miki Jishage National Institute of Genetics, Molecular Genetics; Yata 1111, Mishima, Shizuoka 411, Japan REFERENCE 2 AUTHORS Jishage,M. and Ishihama,A. TITLE Variation in RNA polymerase sigma subunit composition within different stocks of Escherichia coli starin W3110 JOURNAL Unpublished (1996) REFERENCE 3 AUTHORS Ivanova,A., Renshaw,M., Guntaka,R. and Eisenstark,A. TITLE DNA base sequence variability in katF (putative sigma factor) gene Escherichia coli JOURNAL Nucleic Acids Res. 20, 5479-5480 (1992) REFERENCE 4 AUTHORS Takayanagi,Y., Tanaka,K. and Takahashi,H. TITLE Structure of the 5' upstream region and the regulation of the rpoS gene of Escherichia coli JOURNAL Mol. Gen. Genet. 243, 525-531 (1994) COMMENT FEATURES Location/Qualifiers source 1..993 /db_xref="taxon:562" /mol_type="mRNA" /organism="Escherichia coli" /strain="W3110" CDS 1..810 /note="the gene has four single base changes, resulting in two amino acid substitutions and an amber mutation" /product="RNA polymerase sigma subunit, truncated form of sigma-38" /protein_id="BAA13238.1" /transl_table=11 /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEYEPSDNDLAEEE LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAK" variation 75 /citation=[3] /replace="t" variation 97 /citation=[3] /replace="t" variation 99 /citation=[3] /replace="t" variation 808 /citation=[3] /replace="t" BASE COUNT 254 a 223 c 291 g 225 t ORIGIN 1 atgagtcaga atacgctgaa agttcatgat ttaaatgaag atgcggaatt tgatgagaac 61 ggagttgagg tttttgacga aaaggcctta gtagaatatg aacccagtga taacgatttg 121 gccgaagagg aactgttatc gcagggagcc acacagcgtg tgttggacgc gactcagctt 181 taccttggtg agattggtta ttcaccactg ttaacggccg aagaagaagt ttattttgcg 241 cgtcgcgcac tgcgtggaga tgtcgcctct cgccgccgga tgatcgagag taacttgcgt 301 ctggtggtaa aaattgcccg ccgttatggc aatcgtggtc tggcgttgct ggaccttatc 361 gaagagggca acctggggct gatccgcgcg gtagagaagt ttgacccgga acgtggtttc 421 cgcttctcaa catacgcaac ctggtggatt cgccagacga ttgaacgggc gattatgaac 481 caaacccgta ctattcgttt gccgattcac atcgtaaagg agctgaacgt ttacctgcga 541 accgcacgtg agttgtccca taagctggac catgaaccaa gtgcggaaga gatcgcagag 601 caactggata agccagttga tgacgtcagc cgtatgcttc gtcttaacga gcgcattacc 661 tcggtagaca ccccgctggg tggtgattcc gaaaaagcgt tgctggacat cctggccgat 721 gaaaaagaga acggtccgga agataccacg caagatgacg atatgaagca gagcatcgtc 781 aaatggctgt tcgagctgaa cgccaaatag cgtgaagtgc tggcacgtcg attcggtttg 841 ctggggtacg aagcggcaac actggaagat gtaggtcgtg aaattggcct cacccgtgaa 901 cgtgttcgcc agattcaggt tgaaggcctg cgccgtttgc gcgaaatcct gcaaacgcag 961 gggctgaata tcgaagcgct gttccgcgag taa // ------------------------------------------------------------------------------ 9.2. Part of the contents in the accession number index file 'ddbjacc1.idx' The following excerpt from the accession number index file illustrates the format of the index. ------------------------------------------------------------------------------ A00001 A00001 PAT A00001 A00002 A00002 PAT A00002 A00003 A00003 PAT A00003 A00004 A00004 PAT A00004 A00005 A00005 PAT A00005 A00006 A00006 PAT A00006 A00008 A00008 PAT A00008 A00009 A00009 PAT A00009 A00010 A00010 PAT A00010 ------------------------------------------------------------------------------ The accession number index file consists of four columns delimited by tab code. The first column indicates secondary accession number. If there is no secondary accession number, the first column indicates primary accession number. Following columns are locus name, division and primary accession number, respectively. 9.3. Part of the contents in the gene name index file 'ddbjgen1.idx' This file lists all the gene names that appear in the feature table. ------------------------------------------------------------------------------ 2 AJ431263 PLN AJ431263 B epsilon AJ276037 PLN AJ276037 B epsilon AJ276037 PLN AJ276037 B epsilon AJ276037 PLN AJ276037 B epsilon AJ276037 PLN AJ276037 D beta Z22855 ROD Z22855 D beta 1 Z22854 ROD Z22854 D34 Z93215 HUM Z93215 H5 X15387 INV X15387 H5 X15387 INV X15387 HLA-DBR1 X68272 HUM X68272 ------------------------------------------------------------------------------ The gene name index file consists of four columns, gene name, locus name, division and primary accession number, respectively. Columns are delimited by tab code. 10. Release history Release Date Entries Bases Comments 103 12/15 189,264,014 204,119,485,393 102 09/15 187,785,897 200,654,335,022 101 06/15 184,281,713 192,506,352,252 100 03/15 181,941,277 187,798,813,739 99 12/14 178,825,615 184,410,381,191 98 09/14 174,391,281 166,692,710,729 97 06/14 172,402,324 161,078,598,329 96 03/14 171,164,046 158,539,702,882 95 12/13 169,094,459 156,527,217,715 94 09/13 167,480,294 154,916,713,861 93 06/13 165,072,766 152,702,928,183 92 03/13 163,017,305 150,760,062,903 91 12/12 160,729,709 148,418,537,672 90 09/12 156,952,755 144,754,534,372 89 06/12 153,273,314 141,016,380,296 Part of index files terminated 88 12/11 145,861,965 134,956,109,049 87 09/11 142,339,601 131,276,394,833 86 06/11 138,030,308 128,745,918,079 85 03/11 132,302,771 124,516,775,718 84 12/10 128,607,035 120,919,136,706 83 09/10 124,079,491 117,728,717,442 82 06/10 120,034,097 115,169,689,543 81 03/10 116,720,237 112,394,932,676 TPA excluded 80 12/09 112,314,250 109,636,862,252 SOURCE line modified 79 09/09 108,593,519 106,684,379,504 DBLINK line started PROJECT line terminated 78 06/09 105,737,359 104,597,360,291 77 03/09 102,099,156 101,765,388,414 76 12/08 98,220,409 98,741,908,446 75 09/08 92,840,037 95,219,505,205 TSA division started 74 06/08 87,903,140 91,294,770,939 73 03/08 83,167,582 86,099,950,395 KIPO inclusion started 72 12/07 79,004,098 82,592,245,487 Most of E-mail addresses discarded 71 09/07 76,273,345 79,706,204,461 70 06/07 72,801,679 76,788,510,646 69 03/07 67,523,680 71,775,679,500 PROJECT line started Indexes for categories terminated 68 12/06 64,267,978 68,259,314,742 1.5 GB storage started 67 09/06 61,144,621 65,443,024,193 66 06/06 58,176,628 62,945,843,881 65 03/06 55,890,995 60,564,721,635 TPA subcategories started 64 12/05 52,272,669 56,098,558,378 Some index files split 63 09/05 47,741,593 52,246,110,341 62 06/05 45,249,444 49,158,155,283 ENV division started Version for release note started 61 03/05 43,118,204 47,099,081,750 Changed style of release note 60 12/04 40,583,945 44,416,752,273 /db_xref="H-inv:**" started 59 09/04 37,926,117 42,245,956,937 58 06/04 34,917,581 39,812,635,108 57 03/04 32,693,678 38,008,449,840 56 12/03 30,405,173 36,079,046,032 55 09/03 27,753,140 34,280,225,489 54 06/03 25,149,821 32,162,041,177 53 02/03 23,250,813 29,711,299,332 52 12/02 20,354,812 26,931,456,316 51 09/02 18,401,358 22,782,404,136 TPA started 50 06/02 17,260,693 20,158,357,982 49 04/02 16,503,157 18,579,627,226 48 01/02 15,016,100 16,197,713,855 47 10/01 13,266,610 14,145,671,645 46 07/01 12,313,759 13,037,646,166 45 04/01 11,434,113 12,207,092,905 HTC division started 44 01/01 10,165,597 11,136,298,841 43 10/00 8,666,551 10,034,532,698 42 07/00 7,554,995 8,880,721,093 41 04/00 5,962,608 6,409,581,885 CON division started 40 01/00 5,388,125 4,762,696,173 RNA division terminated 39 10/99 4,810,773 3,728,000,562 NID and PID discarded 38 07/99 4,294,369 3,098,519,597 37 03/99 3,311,627 2,375,261,951 VERSION, /protein_id started 36 01/99 3,073,166 2,190,425,560 35 10/98 2,759,261 1,957,341,169 34 07/98 2,412,785 1,708,580,623 33 04/98 2,174,769 1,479,303,279 32 01/98 1,956,669 1,300,950,613 31 10/97 1,731,532 1,139,869,464 Adoption of the unified taxonomy database 30 07/97 1,534,115 992,788,339 NID and PID terminated 29 04/97 1,270,194 841,415,232 28 01/97 1,154,120 756,785,219 HTG division started ORG division terminated 27 10/96 936,697 608,103,057 GSS division started 26 07/96 835,552 551,932,448 25 04/96 744,490 499,300,364 /translation started 24 01/96 637,508 431,771,652 23 10/95 569,757 390,694,350 22 07/95 437,588 322,982,425 HUM division started 21 04/95 274,596 250,875,023 20 01/95 239,689 231,299,557 19 10/94 204,332 205,274,131 18 07/94 185,230 192,473,021 17 04/94 169,957 179,942,209 16 01/94 154,626 165,017,628 15 10/93 131,649 147,224,690 14 07/93 120,350 138,686,333 JPO inclusion started 13 04/93 112,067 129,784,445 12 01/93 97,683 120,815,244 EST division started 11 07/92 65,693 84,839,075 10 01/92 59,317 77,805,556 GenBank/EMBL inclusion started 9 07/91 1,130 2,002,124 8 01/91 879 1,573,442 7 07/90 681 1,154,211 6 01/90 496 841,236 5 07/89 395 679,378 4 01/89 302 535,985 3 07/88 230 345,850 2 01/88 142 199,392 1 07/87 66 108,970 Started with DDBJ only ------------------ Since release 89 ------------------ Index files have been changed: Previously, DDBJ periodical release included index files for accession numbers, keyword phrases, journal citations, and gene names. After arrangement of index files, index files for keyword phrase and journal citation have been terminated and formats of index files for accession number and gene name have been changed. See also "9.2. Part of the contents in the accession number index file 'ddbjacc1.idx'" and "9.3. Part of the contents in the gene name index 'ddbjgen1.idx'" ------------------ Since release 81 ------------------ TPA category data have been excluded from DDBJ periodical release: Since September 2002 (DDBJ release 51), we provided DDBJ periodical releases including TPA category data. However, it is potentially confusing, because TPA category is not primary nucleotide sequence data. Therefore, DDBJ terminated to include TPA data. TPA data has been available from the other FTP site. See following site in detail. URL; http://www.ddbj.nig.ac.jp/whatsnew/whatsnew2009-e.html#090828 ------------------ Since release 80 ------------------ The format of the SOURCE line in DDBJ flat file has been changed: The SOURCE lines in some of DDBJ flat file included a common name like as GenBank flat file. The change is shown below ---------------- Old (-rel. 79) ---------------- Format: SOURCE [] Example: SOURCE Homo sapiens mitochondrion ---------------- New (rel. 80-) ---------------- Format: SOURCE [] [()] Example: SOURCE mitochondrion Homo sapiens (human) See also '2. DDBJ flat file format'. ------------------ Since release 79 ------------------ A new line, DBLINK, has replaced PROJECT line: Following the agreement at the INSD collaborative meeting in 2008, the scope of the project ID has expanded to include projects that are not necessarily targeted to the sequencing of a complete genome. In addition, there are other resources such as the Trace Assembly Archive at the NCBI and the like. Therefore, we have decided to replace the PROJECT line by a new line format, "DBLINK". The replacement is illustrated in the following; From the use of the PROJECT line (-release 78); ------------------------------------------------------------------------------- LOCUS AP000000 4700000 bp DNA circular BCT 27-FEB-2009 DEFINITION Escherichia coli DDBJ genomic DNA, complete genome. ACCESSION AP000000 VERSION AP000000.1 PROJECT GenomeProject:99999 KEYWORDS . ------------------------------------------------------------------------------- To the DBLINK line format (release 79-); ------------------------------------------------------------------------------- LOCUS AP000000 4700000 bp DNA circular BCT 27-FEB-2009 DEFINITION Escherichia coli DDBJ genomic DNA, complete genome. ACCESSION AP000000 VERSION AP000000.1 DBLINK Project:99999 KEYWORDS . ------------------------------------------------------------------------------- ------------------ Since release 75 ------------------ A new division for assembled mRNA sequences, Transcriptome Shotgun Assembly (TSA), has been included since the release 75. With new sequencing technologies in use, INSDC have faced many requests to accept assembled EST sequences. These sequence data have become more useful than used to be, although they may not be correctly assembled or exist in nature. Therefore, INSDC decided to collect assembled EST sequences and classified them into the new division 'TSA'. TSA sequences are shotgun assemblies of primary sequences deposited in the EST division of INSDC, Trace Archive (TA) or Short-Read Archive (SRA). Two specific keywords, "TSA" and "Transcriptome Shotgun Assembly", are present in all TSA entries. The new division code, "TSA", is also described in the the LOCUS line in all TSA entries. No format changes in the flat file are anticipated for the TSA division, however, note that TSA entries make use of the same PRIMARY line that is described for the entries in TPA category. The PRIMARY block contains references to the underlying reads/transcripts that are assembled to construct a TSA record. Note that it is required for a TSA submission to submit sequence data of primary transcripts to the EST division of INSDC, TA, or SRA. More information about how to submit a TSA entry is provided via the following URL; http://www.ddbj.nig.ac.jp/sub/tsa-e.html ------------------ Since release 73 ------------------ Introduction of the sequence data from the Korean Intellectual Property Office: The nucleotide sequence data transferred from Korean Intellectual Property Office (KIPO) have been included in DDBJ release. See also, '3. Division categories' and '3.1. Notice for patent related sequence data'. ------------------ Since release 72 ------------------ Deletion of E-mail address, phone and fax numbers from DDBJ flat file: To follow the Japanese law of protecting personal information, DDBJ deleted both phone and fax numbers, and E-mail address from the flat files of the entries submitted to DDBJ. It would be also helpful to protect DDBJ releases against SPAM mail senders. DDBJ retrofitted most of all entries submitted to DDBJ, not to GenBank or EMBL, by the DDBJ periodical release 72. Before the release 72, the submitter information was described in JOURNAL line at REFERENCE 1 as, -------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Taro Mishima, DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan (E-mail:ddbj@ddbj.nig.ac.jp, URL:http://www.ddbj.nig.ac.jp/, Tel:81-12-345-6789, Fax:81-12-345-9876) -------------------------------------------------------------------------------- After the deletion or the information in question, DDBJ flat file is either one of the following two types; Type 1: Phone and fax numbers and E-mail address are deleted. -------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Contact:Taro Mishima DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan URL :http://www.ddbj.nig.ac.jp/ ------------------------------------------------------------------------------- Type 2: When the submitters wish to keep their contact information disclosed, it is described as, ------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Contact:Taro Mishima DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan URL :http://www.ddbj.nig.ac.jp/ E-mail :ddbj@ddbj.nig.ac.jp Phone :81-12-345-6789 Fax :81-12-345-9876 ------------------------------------------------------------------------------- ------------------ Since release 69 ------------------ Introduction of the project ID at PROJECT line in DDBJ flat file: Following the agreement at the INSD collaborative meeting in 2006, INSDC has started to assign the project ID for submissions from sequencing projects. The description of project ID is shown as below; ---------------------------------------------------------------------------- A unique identifier, assigned at the time of the submission by a sequencing project that informed INSDC of the submission beforehand. It is recommended that the submitter quotes the assigned project ID in all communication with INSDC databases to allow for easier and faster tracking of issues. The project ID field provides an umbrella identifier that points to all related sequence data for the project. ---------------------------------------------------------------------------- The PROJECT lines contain INSDC-assigned ID for the sequencing project. It will be appeared between VERSION and KEYWORDS lines in DDBJ flat files, from the DDBJ periodical release, 69 as shown below. See also '2. DDBJ flat file format'. ---------------------------------------------------------------------------- ACCESSION AB012345 VERSION AB012345.1 PROJECT GenomeProject:123 KEYWORDS . ---------------------------------------------------------------------------- Termination of providing the index files for each category: ------------------ Since release 68 ------------------ Split of files: We changed the maximum file size from 300 MB to 1.5 GB, because the network capacity has been remarkably increased. Each file named as ddbj***##.seq has at most 1.5 GB storage capacity. See also the sections, '8. File categories' and '11. File list'. ------------------ Since release 64 ------------------ Split of index files: In the present release, some of index files (ddbjacc.idx, ddbjjou.idx, and ddbjkey.idx) have been greater than 2 GB in the file size. So, these have been recorded in multiple ddbj****.idx files, each of which at most has 1.5 GB storage capacity as follows, respectively. See also 8., 9.2., 9.3., 9.4. and 11. ------------------ Since release 62 ------------------ Release version number is introduced: DDBJ has started to include the item, 'version', for its release note, which indicates a version for its periodical release. It is expressed like '62.0', in which the digit(s) after the period is a version number. The reason for adding the version number is that a released data is sometimes revised due to urgent and necessary corrections. The number is increased by one every time when a revised periodical release is made public until the next release. Introduction of ENV division: Recently, the submissions of the sequences derived from environmental samples have rapidly increased. To accommodate such submissions, a new division, ENV, has been created (See also '3.1. Division categories'). This division contains the sequences obtained via direct molecular isolation such as PCR, DGGE, or any anonymous method. In the past, the sequences derived from environmental samples belonged to taxonomic divisions, mainly BCT. At DDBJ, the retrofit to transfer relevant entries from taxonomic divisions to the ENV division starts in the present release, and ends by the next periodical release. Please note that during this transitional period, some entries to be eventually placed in the ENV division will be found in other divisions. Strand information is removed: The strand information of LOCUS line in the flat file has been removed as shown below. See also '2.1. LOCUS line'. ---------------------------------------------------------------------------- Old (-rel. 61): 44-44 space 45-47 spaces, ss- (single-stranded), ds- (double-stranded), or ms- (mixed-stranded) New (rel. 62-): 44-47 spaces ---------------------------------------------------------------------------- ------------------ Since release 61 ------------------ The style of release note (this file) has been changed. Some entries have the sequential format for the secondary accession numbers in the ACCESSION line, in order to make the expression of secondary accession numbers in the past short. For example; ------------------------------------------------------------------------------ Before; ACCESSION AB000802 D85885 D85886 D85887 After; ACCESSION AB000802 D85885-D85887 ------------------------------------------------------------------------------ See also '2.3. ACCESSION line'. ------------------ Since release 60 ------------------ The cross-reference to the H-invitational has been included. ------------------ Since release 56 ------------------ The three data banks have agreed that the maximum length limitation (350 kb) of a submitted sequence be relaxed. The BASE COUNT line of the DDBJ flat file format has been changed, corresponding to the relaxation of the maximum sequence length restriction in the entry that had been practiced at DDBJ/EMBL/GenBank International Nucleotide Sequence Databases. In the BASE COUNT line of the DDBJ flat file, 6 digits had been allocated for each number of a, c, g, t and other bases in the sequence. Hereafter, in the new flat file format, 9 digits are allocated for each number of a, c, g and t, while the numbers of other bases are removed. In accordance with the relaxation of sequence length limitation, GenBank had already dropped the BASE COUNT line from their flat file format from GenBank Release 138 (Oct. 2003). We DDBJ have decided to maintain the BASE COUNT line in our flat file format from the view that GC contents are still important information to characterize the sequence. The changes in the BASE COUNT line are shown below. ---------------------------------------------------------------------------- Old (-rel. 55): 1 6 11 16 21 26 31 36 41 46 51 56 61 66 71 |----|----|----|----|----|----|----|----|----|----|----|----|----|----| BASE COUNT 123456 a 123456 c 123456 g 123456 t 123456 others New (rel. 56-): 1 6 11 16 21 26 31 36 41 46 51 56 61 66 71 |----|----|----|----|----|----|----|----|----|----|----|----|----|----| BASE COUNT 123456789 a 123456789 c 123456789 g 123456789 t ---------------------------------------------------------------------------- ------------------ Since release 54 ------------------ '/sequenced_mol' qualifier has been changed to '/mol_type' qualifier. We accordingly completed retrofitting the pertinent entries. This change was made on the agreement at the INSD collaborative meeting in 2002. ------------------ Since release 51 ------------------ The format of LOCUS line in the flat file has been changed as shown below to adjust to the GenBank format. ------------------------------------------------------------------------------ Old (-rel. 50): LOCUS AB000001 660 bp DNA PLN 01-FEB-2001 New (rel. 51-): LOCUS AB000001 660 bp DNA linear PLN 01-FEB-2001 ------------------------------------------------------------------------------ ------------------ Since release 45 ------------------ The HTC (High Throughput cDNA) division has been included. This is to include unfinished high throughput cDNA sequences, each of which has 5'UTR and 3'UTR at both ends and part of a coding region. The sequence may also include introns. When the sequence becomes finished later, it moves to the corresponding taxonomic division. The sequence is accompanied with a keyword, HTC (High Throughput cDNA), which is dropped when the sequence is finished and moved to a taxonomic division. ------------------ Since release 41 ------------------ The CON division has been included. This division is to show the order of related sequences in a genome, and expressed by join and the accession numbers of the sequences. The contents of the CON division are compiled by the three data banks not by the data submitter. ------------------ Since release 40 ------------------ The RNA division was terminated. ------------------ Since release 37 ------------------ The three data banks include the item VERSION in the flat file, which indicates a version of a submitted nucleotide sequence. It is expressed like AB123456.1, in which the digit(s) after the period is a version number. The reason for adding VERSION is that since a released sequence sometimes revised by the submitter, the accession number alone cannot specify the sequence in question causing the user a trouble. The number is increased by one every time when a revised sequence is made public. Accordingly, the translated protein sequence will be accompanied with a /protein_id which is expressed as BAA12345.1, in which the digit(s) after the period is again a version number. The number is increased by one when the corresponding nucleotide sequence is revised and the protein sequence is changed as a result, and when the revised protein sequence is made public. ------------------ Since release 31 ------------------ We have started adopting the unified taxonomy database to unify the biological source of the sequence. The database is made up with scientific names, ID of unidentified organisms, and synthetic constructs etc. ------------------ Since release 30 ------------------ NID and PID were terminated. This change was made on the agreement at the INSD collaborative meeting in 1999. ------------------ Since release 28 ------------------ The HTG (High Throughput Genomic sequence) has been included. We terminated the ORG (Organelle) division. ------------------ Since release 27 ------------------ The GSS division has been included. GSS stands for Genome Survey Sequence, which is similar to EST, except that GSS is genomic DNA whereas EST is cDNA. ------------------ Since release 25 ------------------ DDBJ release contains amino acid sequences that were translated from the corresponding nucleotide sequences of the database. ------------------ Since release 22 ------------------ The HUM division has been included. We have the human (HUM) division solely for human sequences and the primate (PRI) division for non-human primate sequences. ------------------ Since release 12 ------------------ The EST (Expressed Sequence Tag) division has been included. ------------------ Since release 10 ------------------ The sequences submitted to GenBank or EMBL have been included in the release. 11. File list The files in this release are arranged in the following order with non-labeled format. ----------------------------------------------------------------------- file name file size ----------------------------------------------------------------------- ddbjrel.txt (DDBJ release note) 86534 ddbjacc1.idx (Accession number index file 1) 1468006389 ddbjacc2.idx (Accession number index file 2) 1468006400 ddbjacc3.idx (Accession number index file 3) 1468006396 ddbjacc4.idx (Accession number index file 4) 1468006380 ddbjacc5.idx (Accession number index file 5) 1074932065 ddbjgen1.idx (Gene name index file 1) 400536918 ----------------------------------------------------------------------- file name number of entries number of bases file size ----------------------------------------------------------------------- ddbjbct1.seq 171101 593035953 1480926808 ddbjbct2.seq 26438 659006669 1485624434 ddbjbct3.seq 70307 710829780 1488947769 ddbjbct4.seq 441 665578385 1481654474 ddbjbct5.seq 347 659753719 1489661767 ddbjbct6.seq 371 653733686 1482625348 ddbjbct7.seq 534 658994271 1487222462 ddbjbct8.seq 348 650548992 1479101121 ddbjbct9.seq 398 651844803 1484413035 ddbjbct10.seq 352 660225972 1488743735 ddbjbct11.seq 353 666927621 1481936369 ddbjbct12.seq 426 670261993 1484596166 ddbjbct13.seq 332 694761063 1487224167 ddbjbct14.seq 790 677415189 1489910645 ddbjbct15.seq 337 669844433 1487303297 ddbjbct16.seq 262 647487435 1480983135 ddbjbct17.seq 135 629846518 1476077398 ddbjbct18.seq 262 659694383 1489293921 ddbjbct19.seq 316 682153430 1485860207 ddbjbct20.seq 263 684267447 1486428613 ddbjbct21.seq 282 681195280 1482428555 ddbjbct22.seq 366 679183362 1484982022 ddbjbct23.seq 328 656601984 1489189856 ddbjbct24.seq 251 657787244 1484525379 ddbjbct25.seq 308 658190219 1488529490 ddbjbct26.seq 324 657003957 1484569762 ddbjbct27.seq 125474 592390230 1489998365 ddbjbct28.seq 141509 576551507 1485596585 ddbjbct29.seq 128153 609064187 1482388020 ddbjbct30.seq 241582 547640354 1489998884 ddbjbct31.seq 400142 448874247 1461552727 ddbjbct32.seq 35706 772177014 1489996017 ddbjbct33.seq 8081 15023271 41931309 ddbjenv1.seq 483129 456280138 1489997810 ddbjenv2.seq 567456 396099122 1489996701 ddbjenv3.seq 582828 388679566 1489998699 ddbjenv4.seq 582779 371883245 1489998093 ddbjenv5.seq 681130 312284419 1489997672 ddbjenv6.seq 518497 388595636 1489999592 ddbjenv7.seq 515453 406985823 1489997046 ddbjenv8.seq 559976 356049791 1489998305 ddbjenv9.seq 416808 335264404 1489998333 ddbjenv10.seq 530536 364468791 1489997749 ddbjenv11.seq 515292 381049961 1489976214 ddbjenv12.seq 504526 325663207 1489997448 ddbjenv13.seq 617000 260948261 1489998846 ddbjenv14.seq 392949 206538848 976732237 ddbjest1.seq 450117 168309119 1489998556 ddbjest2.seq 475571 185215705 1489998350 ddbjest3.seq 490065 203585009 1489999673 ddbjest4.seq 463593 197033118 1489998246 ddbjest5.seq 553527 272849735 1489997493 ddbjest6.seq 540700 346123911 1489998569 ddbjest7.seq 540405 312625064 1489998071 ddbjest8.seq 430999 148580356 1489995669 ddbjest9.seq 460136 191200136 1489999365 ddbjest10.seq 510632 238691063 1489998266 ddbjest11.seq 457673 194197745 1489997660 ddbjest12.seq 393215 147836986 1489998005 ddbjest13.seq 271778 83807511 1489996243 ddbjest14.seq 272354 99717053 1489999432 ddbjest15.seq 352382 173309471 1489997120 ddbjest16.seq 467642 226597789 1489998438 ddbjest17.seq 456299 243424351 1489998328 ddbjest18.seq 444200 248391936 1489997659 ddbjest19.seq 440399 223911012 1489996365 ddbjest20.seq 460055 241333592 1489999844 ddbjest21.seq 443870 282348598 1489999954 ddbjest22.seq 475416 258177691 1489997931 ddbjest23.seq 429590 242948348 1489997439 ddbjest24.seq 464946 268341883 1489998210 ddbjest25.seq 527396 289431507 1489997550 ddbjest26.seq 490800 277375954 1489998574 ddbjest27.seq 398903 225280265 1489998076 ddbjest28.seq 413588 239501924 1489996629 ddbjest29.seq 532120 286059535 1489999917 ddbjest30.seq 487309 234214690 1489999237 ddbjest31.seq 435814 235592253 1489999727 ddbjest32.seq 427472 265976721 1489999772 ddbjest33.seq 417850 287633033 1489997312 ddbjest34.seq 397618 259089329 1489997928 ddbjest35.seq 588907 356274808 1489999274 ddbjest36.seq 589026 316241034 1489999386 ddbjest37.seq 458366 314377860 1489999736 ddbjest38.seq 364220 204640464 1489998201 ddbjest39.seq 258090 97604220 1489996907 ddbjest40.seq 255615 105694908 1489998269 ddbjest41.seq 351056 185618430 1489999541 ddbjest42.seq 462346 259222301 1489999080 ddbjest43.seq 471840 259862001 1489998732 ddbjest44.seq 433882 232352271 1489998289 ddbjest45.seq 487295 280263116 1489998854 ddbjest46.seq 479507 250859779 1489998427 ddbjest47.seq 424304 245505818 1489999463 ddbjest48.seq 536805 275948616 1489996801 ddbjest49.seq 418510 238020972 1489997071 ddbjest50.seq 396653 233393170 1489996890 ddbjest51.seq 260090 133336814 1489998775 ddbjest52.seq 265081 108733937 1489999599 ddbjest53.seq 301377 131790704 1489999042 ddbjest54.seq 399565 218988977 1489999962 ddbjest55.seq 547908 315934515 1489997897 ddbjest56.seq 419516 281202409 1489997171 ddbjest57.seq 433018 236366471 1489999655 ddbjest58.seq 461955 273971473 1489999414 ddbjest59.seq 413108 226141725 1489998732 ddbjest60.seq 460337 269792726 1489998128 ddbjest61.seq 462251 264086956 1489999214 ddbjest62.seq 405335 233157748 1489999963 ddbjest63.seq 481906 330569212 1489999623 ddbjest64.seq 476382 285530785 1489996503 ddbjest65.seq 433335 227525730 1489998300 ddbjest66.seq 437785 262044002 1489990523 ddbjest67.seq 428677 265609138 1489996459 ddbjest68.seq 383953 248389803 1489998219 ddbjest69.seq 406760 245830008 1489998036 ddbjest70.seq 425339 235889069 1489997484 ddbjest71.seq 422002 236028035 1489998545 ddbjest72.seq 444827 247050131 1489999152 ddbjest73.seq 453750 249973113 1489999861 ddbjest74.seq 531982 309810190 1489999876 ddbjest75.seq 525032 337602924 1489999454 ddbjest76.seq 541623 315298717 1489999893 ddbjest77.seq 456139 260215038 1489998543 ddbjest78.seq 473806 280025402 1489997001 ddbjest79.seq 391174 291770321 1489998469 ddbjest80.seq 479501 289464792 1489997514 ddbjest81.seq 371753 266672161 1489998818 ddbjest82.seq 382879 256147329 1489996217 ddbjest83.seq 364924 255960894 1489998335 ddbjest84.seq 401243 312400773 1489997311 ddbjest85.seq 450131 293412093 1489999796 ddbjest86.seq 456637 307973585 1489998459 ddbjest87.seq 464485 280547899 1489998665 ddbjest88.seq 519254 224554586 1489999680 ddbjest89.seq 544182 273702998 1489997250 ddbjest90.seq 461661 300870075 1489999251 ddbjest91.seq 503566 291636932 1489998230 ddbjest92.seq 544189 313352933 1489999309 ddbjest93.seq 601476 247569940 1489998383 ddbjest94.seq 541012 301354000 1489998870 ddbjest95.seq 490152 296329985 1489998559 ddbjest96.seq 512999 255664646 1489998045 ddbjest97.seq 519821 226923104 1489997238 ddbjest98.seq 507548 310856559 1489996708 ddbjest99.seq 408602 230791612 1489997991 ddbjest100.seq 573948 179208108 1489999691 ddbjest101.seq 509075 246628710 1489998374 ddbjest102.seq 547852 202637266 1489999283 ddbjest103.seq 474531 288718798 1489997027 ddbjest104.seq 479639 301539642 1489999085 ddbjest105.seq 494577 294613071 1489999399 ddbjest106.seq 542519 239059520 1489998769 ddbjest107.seq 549717 233390244 1489998073 ddbjest108.seq 457948 288750284 1489998710 ddbjest109.seq 402999 273687111 1489998011 ddbjest110.seq 458488 272619375 1489999478 ddbjest111.seq 443780 296881046 1489999524 ddbjest112.seq 477539 341139600 1489997399 ddbjest113.seq 395709 262277195 1489999029 ddbjest114.seq 401278 271165469 1489999690 ddbjest115.seq 450842 266521200 1489997820 ddbjest116.seq 432813 276954726 1489996692 ddbjest117.seq 442016 270113753 1489998011 ddbjest118.seq 358519 206066163 1489997730 ddbjest119.seq 369794 236006106 1489999970 ddbjest120.seq 524614 243684490 1489998244 ddbjest121.seq 435244 267638897 1489996634 ddbjest122.seq 435024 282323424 1489998419 ddbjest123.seq 472855 286914554 1489998987 ddbjest124.seq 303566 186996370 1489998440 ddbjest125.seq 399713 171149141 1489998238 ddbjest126.seq 473661 199484859 1489999548 ddbjest127.seq 633398 303906723 1489996470 ddbjest128.seq 393807 248145793 1489997075 ddbjest129.seq 572775 278970076 1489999165 ddbjest130.seq 604843 343731109 1489998944 ddbjest131.seq 523117 306267039 1489999875 ddbjest132.seq 503149 360716902 1489998845 ddbjest133.seq 537975 334893092 1489996861 ddbjest134.seq 540502 306109333 1489997682 ddbjest135.seq 518027 333768674 1489997916 ddbjest136.seq 568398 374744971 1489998585 ddbjest137.seq 523963 350289462 1489999016 ddbjest138.seq 492946 137683794 1489997964 ddbjest139.seq 440926 79374763 1489999977 ddbjest140.seq 461857 233399795 1489998999 ddbjest141.seq 449313 293451427 1489999725 ddbjest142.seq 415323 277949524 1489999921 ddbjest143.seq 462503 268867506 1489997908 ddbjest144.seq 453314 211751269 1489997701 ddbjest145.seq 452154 274036687 1489999426 ddbjest146.seq 434295 291630797 1489997405 ddbjest147.seq 437207 262237949 1489999839 ddbjest148.seq 471334 280275261 1489999334 ddbjest149.seq 357154 228437086 1489998823 ddbjest150.seq 330420 206452529 1489999951 ddbjest151.seq 380349 234624856 1489997670 ddbjest152.seq 475519 277031778 1489998651 ddbjest153.seq 446652 243073427 1489998207 ddbjest154.seq 466387 307884990 1489997955 ddbjest155.seq 537132 320845369 1489997310 ddbjest156.seq 392811 265089845 1489997031 ddbjest157.seq 543921 229808709 1489998603 ddbjest158.seq 518005 260693890 1489999132 ddbjest159.seq 508715 307196013 1489999286 ddbjest160.seq 389433 200688685 1489999668 ddbjest161.seq 510876 303848711 1489999616 ddbjest162.seq 489816 299662795 1489998059 ddbjest163.seq 457351 265668324 1489997720 ddbjest164.seq 458474 246632089 1489999616 ddbjest165.seq 488566 312541304 1489997100 ddbjest166.seq 503717 316255409 1489998017 ddbjest167.seq 484597 188905594 1489999640 ddbjest168.seq 10275 3138859 29926255 ddbjgss1.seq 475805 343111759 1489997438 ddbjgss2.seq 441812 340955248 1489997633 ddbjgss3.seq 447733 333310763 1489996164 ddbjgss4.seq 554395 271407558 1489997343 ddbjgss5.seq 478912 249419579 1489997705 ddbjgss6.seq 457645 252156104 1489998513 ddbjgss7.seq 390139 194351886 1489999799 ddbjgss8.seq 396469 196476446 1489998070 ddbjgss9.seq 483020 258128273 1489998186 ddbjgss10.seq 524815 288556887 1489998375 ddbjgss11.seq 518140 320762320 1489999421 ddbjgss12.seq 504214 322132996 1489998352 ddbjgss13.seq 510051 318077274 1489996360 ddbjgss14.seq 476520 379472574 1489999514 ddbjgss15.seq 559785 339556533 1489999404 ddbjgss16.seq 609570 316694566 1489999964 ddbjgss17.seq 546879 379990465 1489999647 ddbjgss18.seq 520107 312181255 1489996914 ddbjgss19.seq 492432 335832451 1489998725 ddbjgss20.seq 529615 358640038 1489997812 ddbjgss21.seq 583968 373213271 1489998897 ddbjgss22.seq 599746 412462300 1489999708 ddbjgss23.seq 479181 271091489 1489997897 ddbjgss24.seq 477556 301684089 1489999806 ddbjgss25.seq 520385 327759378 1489999444 ddbjgss26.seq 511811 329240353 1489999729 ddbjgss27.seq 531449 333267153 1489998901 ddbjgss28.seq 612960 298488410 1489999966 ddbjgss29.seq 557749 269744110 1489998820 ddbjgss30.seq 525593 365954992 1489997263 ddbjgss31.seq 472319 356471986 1489997312 ddbjgss32.seq 466692 343056106 1489999875 ddbjgss33.seq 513977 357642573 1489998332 ddbjgss34.seq 570344 327438001 1489999076 ddbjgss35.seq 442686 332616872 1489996683 ddbjgss36.seq 510558 347793412 1489997388 ddbjgss37.seq 502292 236845627 1489999422 ddbjgss38.seq 556121 285300303 1489996865 ddbjgss39.seq 414714 300238160 1489997405 ddbjgss40.seq 397793 327582271 1489997976 ddbjgss41.seq 409253 336565493 1489996950 ddbjgss42.seq 406682 322854976 1489997394 ddbjgss43.seq 410018 333098435 1489996792 ddbjgss44.seq 408860 339194906 1489998467 ddbjgss45.seq 403851 325441987 1489996992 ddbjgss46.seq 461507 329214794 1489998680 ddbjgss47.seq 518751 320300862 1489997753 ddbjgss48.seq 577767 383050011 1489997997 ddbjgss49.seq 570873 398279094 1489999658 ddbjgss50.seq 533167 383790636 1489997953 ddbjgss51.seq 455146 225558625 1489998540 ddbjgss52.seq 509865 370805118 1489997892 ddbjgss53.seq 550697 331520524 1489998248 ddbjgss54.seq 531027 364358405 1489996114 ddbjgss55.seq 545167 399709520 1489998360 ddbjgss56.seq 551876 331305335 1489998164 ddbjgss57.seq 504236 450858183 1489997180 ddbjgss58.seq 507461 392808275 1489998258 ddbjgss59.seq 542029 346886855 1489998557 ddbjgss60.seq 527084 337376280 1489999550 ddbjgss61.seq 596091 383967343 1489999696 ddbjgss62.seq 524446 376378400 1489997303 ddbjgss63.seq 475795 410751830 1489998364 ddbjgss64.seq 484203 426565697 1489998900 ddbjgss65.seq 484543 375595950 1489998435 ddbjgss66.seq 672180 169531754 1489999496 ddbjgss67.seq 695166 172515423 1489998768 ddbjgss68.seq 536694 275844521 1489997561 ddbjgss69.seq 482442 429614434 1489997476 ddbjgss70.seq 625775 231133006 1489997860 ddbjgss71.seq 516750 247227329 1489997762 ddbjgss72.seq 436750 334547714 1489998132 ddbjgss73.seq 539196 405597153 1489997972 ddbjgss74.seq 543402 325431305 1489999491 ddbjgss75.seq 516735 359207752 1489999727 ddbjgss76.seq 525432 315196341 1489997642 ddbjgss77.seq 585747 426046939 1489997940 ddbjgss78.seq 351366 310201106 998445982 ddbjhtc1.seq 265601 361402399 1489997142 ddbjhtc2.seq 275257 269550841 1015212163 ddbjhtg1.seq 11357 1111192941 1489897840 ddbjhtg2.seq 7549 1111094029 1489854039 ddbjhtg3.seq 5828 1124537749 1489889411 ddbjhtg4.seq 5492 1132255800 1489860837 ddbjhtg5.seq 5287 1137037420 1489766054 ddbjhtg6.seq 5339 1136880724 1489711486 ddbjhtg7.seq 6497 1125841286 1489968702 ddbjhtg8.seq 6843 1135939380 1489902184 ddbjhtg9.seq 6237 1132530209 1489840007 ddbjhtg10.seq 6255 1126216784 1489944022 ddbjhtg11.seq 6961 1118285328 1489891558 ddbjhtg12.seq 7008 1119249379 1489761690 ddbjhtg13.seq 6962 1146686214 1489930134 ddbjhtg14.seq 7032 1141925079 1489975378 ddbjhtg15.seq 6795 1148932368 1489812289 ddbjhtg16.seq 6312 1135708018 1489917432 ddbjhtg17.seq 6520 1134312949 1489818811 ddbjhtg18.seq 8522 1139236724 1489911053 ddbjhtg19.seq 9087 1091148997 1489916385 ddbjhtg20.seq 9438 1072217285 1489966828 ddbjhtg21.seq 7776 1123831593 1489916341 ddbjhtg22.seq 6452 1149571802 1489827744 ddbjhtg23.seq 7673 1150637408 1489894455 ddbjhtg24.seq 6726 1038880240 1356374035 ddbjhum1.seq 34837 1032909385 1489991629 ddbjhum2.seq 8024 1062725317 1489929256 ddbjhum3.seq 123182 886459273 1489998596 ddbjhum4.seq 45478 1052055072 1489928777 ddbjhum5.seq 195043 654224685 1489974996 ddbjhum6.seq 184266 612079366 1489997466 ddbjhum7.seq 93805 148735198 407085021 ddbjinv1.seq 263735 646948892 1489997206 ddbjinv2.seq 311413 583240948 1489999994 ddbjinv3.seq 394668 478274564 1487823330 ddbjinv4.seq 254296 656515128 1489997007 ddbjinv5.seq 447418 327236899 1489999603 ddbjinv6.seq 442014 321942712 1489997398 ddbjinv7.seq 442052 314015071 1489997696 ddbjinv8.seq 380872 469763849 1489997684 ddbjinv9.seq 441453 792872987 1489956350 ddbjinv10.seq 58757 1116056862 1489988808 ddbjinv11.seq 194631 1006278232 1489996190 ddbjinv12.seq 124516 1038391445 1489995003 ddbjinv13.seq 347608 833176887 1489998893 ddbjinv14.seq 229013 957389335 1489954982 ddbjinv15.seq 115107 1037225087 1489979657 ddbjinv16.seq 138159 1038432584 1489989652 ddbjinv17.seq 257149 914515097 1489974165 ddbjinv18.seq 167610 978638770 1489926785 ddbjinv19.seq 342275 857568188 1489985793 ddbjinv20.seq 178824 924712187 1489997057 ddbjinv21.seq 331513 488222867 1055337494 ddbjmam1.seq 100110 930890425 1484273423 ddbjmam2.seq 9 1003825156 1386128677 ddbjmam3.seq 15 925870538 1300695269 ddbjmam4.seq 284236 673703082 1489998976 ddbjmam5.seq 65410 71752109 234229233 ddbjpat1.seq 1051851 506032674 1489999825 ddbjpat2.seq 749532 503977390 1489999037 ddbjpat3.seq 679323 317284364 1489999524 ddbjpat4.seq 712082 600470985 1489998855 ddbjpat5.seq 701591 374623204 1489999049 ddbjpat6.seq 668268 330113402 1489999105 ddbjpat7.seq 631043 293673989 1489997637 ddbjpat8.seq 621185 311762329 1489999238 ddbjpat9.seq 782270 527742941 1489999455 ddbjpat10.seq 889766 534955080 1489999998 ddbjpat11.seq 535796 445165315 1489999785 ddbjpat12.seq 641334 295631340 1489998457 ddbjpat13.seq 461391 589772118 1485444399 ddbjpat14.seq 595567 338054098 1489999408 ddbjpat15.seq 484922 514838779 1489999403 ddbjpat16.seq 921562 26707675 1489998764 ddbjpat17.seq 948839 18027941 1489998884 ddbjpat18.seq 1182263 144310640 1489998853 ddbjpat19.seq 897304 512974523 1489999986 ddbjpat20.seq 824111 579224741 1489996961 ddbjpat21.seq 1359320 361192170 1489999398 ddbjpat22.seq 761635 698873724 1489999424 ddbjpat23.seq 667109 753783114 1488909474 ddbjpat24.seq 927212 575875495 1489985768 ddbjpat25.seq 1193289 363740791 1489998764 ddbjpat26.seq 1000010 367372835 1489998565 ddbjpat27.seq 844188 431383580 1489999189 ddbjpat28.seq 1471035 52272625 1489999138 ddbjpat29.seq 959473 466000584 1489999723 ddbjpat30.seq 1063558 501892716 1489998695 ddbjpat31.seq 651776 495841976 1489999273 ddbjpat32.seq 537995 441971295 1489999884 ddbjpat33.seq 524837 485935971 1489998411 ddbjpat34.seq 700392 232376053 1489999017 ddbjpat35.seq 276328 348771520 1489999408 ddbjpat36.seq 920296 463320540 1489998086 ddbjpat37.seq 616597 696943673 1489999693 ddbjpat38.seq 892864 444799504 1489999103 ddbjpat39.seq 1424430 52154124 1489999899 ddbjpat40.seq 304964 46050916 366403449 ddbjphg1.seq 10165 230522282 546604074 ddbjpln1.seq 174313 822993451 1489978649 ddbjpln2.seq 219677 689310254 1489997140 ddbjpln3.seq 136221 770082472 1489971530 ddbjpln4.seq 44060 958091760 1489995477 ddbjpln5.seq 303091 501789980 1479642797 ddbjpln6.seq 1009 755492692 1488831543 ddbjpln7.seq 861 877346697 1478188913 ddbjpln8.seq 246520 708128547 1489998690 ddbjpln9.seq 497190 398812909 1489998906 ddbjpln10.seq 121115 879140274 1489991851 ddbjpln11.seq 285616 603940850 1486245953 ddbjpln12.seq 21734 1079300221 1478373838 ddbjpln13.seq 17 1137664546 1445596291 ddbjpln14.seq 329529 640565999 1489997987 ddbjpln15.seq 439583 416070345 1489997791 ddbjpln16.seq 427476 398712772 1489795573 ddbjpln17.seq 420171 409508953 1489997976 ddbjpln18.seq 216700 708930853 1461328489 ddbjpln19.seq 47942 599362711 876686120 ddbjpri1.seq 30606 1099412046 1489999816 ddbjpri2.seq 102502 277264918 578636777 ddbjrod1.seq 41104 1001504795 1489857894 ddbjrod2.seq 5873 1086879030 1489876737 ddbjrod3.seq 6250 1099914891 1489856258 ddbjrod4.seq 112325 853457526 1489832077 ddbjrod5.seq 353645 450526221 1251366489 ddbjsts1.seq 414359 208823375 1489998140 ddbjsts2.seq 334233 236781156 1489995412 ddbjsts3.seq 572222 184631124 1489997285 ddbjsts4.seq 25885 10597049 70956383 ddbjsyn1.seq 132702 799060459 1489958669 ddbjsyn2.seq 34659 206909065 388846580 ddbjtsa1.seq 658380 261300813 1489999675 ddbjtsa2.seq 547647 295361900 1489998570 ddbjtsa3.seq 483459 390796441 1489997342 ddbjtsa4.seq 499101 408554808 1489999076 ddbjtsa5.seq 490351 341048966 1489994238 ddbjtsa6.seq 569468 324434955 1489999880 ddbjtsa7.seq 552583 337397116 1489999532 ddbjtsa8.seq 569184 273737733 1489998441 ddbjtsa9.seq 558330 367033173 1489997771 ddbjtsa10.seq 450981 465433370 1489998578 ddbjtsa11.seq 464919 428583165 1489997492 ddbjtsa12.seq 524119 399366848 1489999039 ddbjtsa13.seq 499004 389715308 1489997926 ddbjtsa14.seq 557831 358371973 1489997737 ddbjtsa15.seq 504777 381136158 1489998741 ddbjtsa16.seq 436273 361092135 1489999152 ddbjtsa17.seq 491427 416947706 1489991442 ddbjtsa18.seq 490170 417876051 1489997008 ddbjtsa19.seq 495755 500422117 1489998863 ddbjtsa20.seq 518333 361765369 1489997871 ddbjtsa21.seq 388412 377163661 1489997903 ddbjtsa22.seq 439842 346262085 1489998020 ddbjtsa23.seq 515124 402551309 1489999651 ddbjtsa24.seq 451098 449300989 1489998524 ddbjtsa25.seq 491421 404722429 1489999898 ddbjtsa26.seq 503588 423982408 1489996324 ddbjtsa27.seq 247315 691717337 1489992664 ddbjtsa28.seq 316696 303687540 1489995567 ddbjtsa29.seq 216225 208268271 1489997197 ddbjtsa30.seq 246775 71439740 1489999806 ddbjtsa31.seq 169493 41971053 1014413675 ddbjuna1.seq 372 254822 993720 ddbjvrl1.seq 386909 401686006 1489997480 ddbjvrl2.seq 316293 419872188 1489996974 ddbjvrl3.seq 345633 419510572 1489998626 ddbjvrl4.seq 321973 434683467 1489997787 ddbjvrl5.seq 267531 466898395 1489995490 ddbjvrl6.seq 264357 481440938 1477640824 ddbjvrt1.seq 258326 701699732 1489996931 ddbjvrt2.seq 81998 926751039 1489950779 ddbjvrt3.seq 254444 736815437 1489998796 ddbjvrt4.seq 437019 436616028 1489999445 ddbjvrt5.seq 485754 338048041 1489999023 ddbjvrt6.seq 464422 395604897 1473538824 ddbjvrt7.seq 3707 1157300975 1489900188 ddbjvrt8.seq 326088 869204029 1487146887 ddbjvrt9.seq 7850 1166608685 1489967569 ddbjvrt10.seq 18890 39448703 88368419 ----------------------------------------------------------------------- Total 189264014 204119485393 687135705106 ddbjtpa1.seq 94221 925760329 1487882661 ddbjtpa2.seq 2399 45042221 74364770 ddbjtpacon1.seq 154905 0 1488513326 ddbjtpacon2.seq 1330 0 122329509 ddbjcon1.seq 108246 0 1488767323 ddbjcon2.seq 86304 0 1489871063 ddbjcon3.seq 2392 0 1489973079 ddbjcon4.seq 314473 0 1489996643 ddbjcon5.seq 573241 0 1489551854 ddbjcon6.seq 262182 0 1489999040 ddbjcon7.seq 379735 0 1489998550 ddbjcon8.seq 251625 0 1489994854 ddbjcon9.seq 264531 0 1489998160 ddbjcon10.seq 263938 0 1489997064 ddbjcon11.seq 264580 0 1489995412 ddbjcon12.seq 293879 0 1489997682 ddbjcon13.seq 316700 0 1489999819 ddbjcon14.seq 291740 0 1489996908 ddbjcon15.seq 279637 0 1489999101 ddbjcon16.seq 279383 0 1489997809 ddbjcon17.seq 278666 0 1489996766 ddbjcon18.seq 241798 0 1489996955 ddbjcon19.seq 268802 0 1489997751 ddbjcon20.seq 321836 0 1489816869 ddbjcon21.seq 193917 0 1489999722 ddbjcon22.seq 190355 0 1489997382 ddbjcon23.seq 243315 0 1489982459 ddbjcon24.seq 301834 0 1489999259 ddbjcon25.seq 790499 0 1489998739 ddbjcon26.seq 355971 0 1489999699 ddbjcon27.seq 232640 0 1489998841 ddbjcon28.seq 165520 0 1489998423 ddbjcon29.seq 257819 0 1489999041 ddbjcon30.seq 353013 0 1489748706 ddbjcon31.seq 374266 0 1489997663 ddbjcon32.seq 331895 0 1489999058 ddbjcon33.seq 547704 0 1489999121 ddbjcon34.seq 397421 0 1489961767 ddbjcon35.seq 472316 0 1489998967 ddbjcon36.seq 379616 0 1489998383 ddbjcon37.seq 475153 0 1489997351 ddbjcon38.seq 296441 0 1489997027 ddbjcon39.seq 248248 0 1489891894 ddbjcon40.seq 379242 0 1489622286 ddbjcon41.seq 363941 0 1489998450 ddbjcon42.seq 266894 0 1489999353 ddbjcon43.seq 363209 0 1489997972 ddbjcon44.seq 495255 0 1489998250 ddbjcon45.seq 298228 0 1489999927 ddbjcon46.seq 303547 0 1489999402 ddbjcon47.seq 131979 0 1489408681 ddbjcon48.seq 237335 0 1489995015 ddbjcon49.seq 308164 0 1489996205 ddbjcon50.seq 462882 0 1489998207 ddbjcon51.seq 288795 0 1339056323 The entries and bases in the CON division are not counted in the numbers given on the top of the release note or 'Total' on the above table.