DNA Data Bank of Japan DNA Database Release 81.0, Mar. 2010, including 116,720,237 entries, 112,394,932,676 bases Last published date in the present release: February 26, 2010 ------------------------------------------------------------------------------- Table of contents ------------------------------------------------------------------------------- 1. Introduction 1.1. Announcement for changes in the present release 1.2. Announcement for the forthcoming changes 2. DDBJ flat file format 2.1. LOCUS line 2.2. DEFINITION line 2.3. ACCESSION line 2.4. VERSION line 2.5. KEYWORDS line 2.6. SOURCE line 2.7. REFERENCE line 2.8. COMMENT line 2.9. FEATURES line 2.10. BASE COUNT line 2.11. ORIGIN line 3. Division categories 3.1. Notice for patent related sequence data 4. DDBJ staff 5. Acknowledgment 6. File categories 7. Sample of the contents in each file 7.1. Part of the contents in the file 'ddbjbct1.seq' 7.2. Part of the contents in the accession number index file 'ddbjacc1.idx' 7.3. Part of the contents in the keyword phrase index file 'ddbjkey1.idx' 7.4. Part of the contents in the journal citation index file 'ddbjjou1.idx' 7.5. Part of the contents in the gene name index 'ddbjgen.idx' 8. Release history 9. File list ------------------------------------------------------------------------------- 1. Introduction The present release contains the newest data prepared by the DNA Data Bank of Japan (DDBJ), GenBank (*), and EMBL-Bank/European Bioinformatics Institute (EMBL-Bank/EBI) as of February 26, 2010. This unified database was made possible thanks to the international collaboration among the three data banks. All the entries have accordingly been annotated using the feature keys common to them. In 2005, DDBJ, EMBL-Bank and GenBank agreed to call their collaboration "the International Nucleotide Sequence Database Collaboration (INSDC); http://www.insdc.org " and to call the unified nucleotide sequence database "the International Nucleotide Sequence Database (INSD)". *'GenBank' is a trademark of NIH, USA, and is operated by National Center for Biotechnology Information (NCBI) at NIH. This database may be copied and redistributed without permission on the condition that all the statements in this release note are reproduced in each copy. See also '3.1. Notice for patent related sequence data' below. 1.1. Announcement for changes in the present release TPA category data have been excluded from DDBJ periodical release: Since September 2002 (DDBJ release 51), we provided DDBJ periodical releases including TPA category data. However, it is potentially confusing, because TPA category is not primary nucleotide sequence data. Therefore, DDBJ has terminated to include TPA data from the present periodical release. TPA data has been available from the other FTP site. See following site in detail. URL; http://www.ddbj.nig.ac.jp/whatsnew/whatsnew2009-e.html#090828 1.2. Announcement for the forthcoming changes DDBJ will postpone making up its periodical release 83 from September to December: Since DDBJ is planning to improve its systems substantially, during the third quarter in 2010, DDBJ will skip to make up its periodical release after the next in September 2010. So, DDBJ periodical release 83 will be prepared in December 2010. Revision of the DDBJ/EMBL/GenBank Feature Table: Definition: Following the agreement at the INSD collaborative meeting in 2009, the document, DDBJ/EMBL/GenBank Feature Table: Definition, will be revised in April , 2010. See also '2.9. FEATURES line' below. The revised points are introduced in advance on the following URL; http://www.ddbj.nig.ac.jp/insdc/icm2009-e.html#ft 2. DDBJ flat file format The database is a collection of "entry" which is the unit of the data. The entries submitted to databanks were processed and publicized according to the DDBJ format for distribution (flat file). The flat file includes the sequence and the information of submitters, references, source organisms, and "feature" information, etc. The items of the DDBJ flat file are explained at following; ------------------------------------------------------------------------------- LOCUS AB000000 450 bp mRNA linear HUM 08-JUL-2002 DEFINITION Homo sapiens GAPD mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds. ACCESSION AB000000 VERSION AB000000.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 450) AUTHORS Mishima,H. and Shizuoka,T. TITLE Direct Submission JOURNAL Submitted (30-NOV-2000) to the DDBJ/EMBL/GenBank databases. Contact:Hanako Mishima National Institute of Genetics, DNA Data Bank of Japan; 1111, Yata, Mishima, Shizuoka 411-8540, Japan REFERENCE 2 AUTHORS Mishima,H., Shizuoka,T. and Fuji,I. TITLE Glyceraldehyde-3-phosphate dehydrogenase expressed in human liver JOURNAL Unpublished (2002) COMMENT Human cDNA sequencing project. FEATURES Location/Qualifiers source 1..450 /chromosome="12" /clone="GT200015" /clone_lib="lambda gt11 human liver cDNA (GeneTech. No.20)" /map="12p13" /mol_type="mRNA" /organism="Homo sapiens" /tissue_type="liver" CDS 86..>450 /codon_start=1 /gene="GAPD" /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="BAA12345.1" /transl_table=1 /translation="MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMT YMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPKEIPWGETSAEFVVEYTG VFTDKDKAVAQLKGGAKKV" BASE COUNT 102 a 119 c 131 g 98 t ORIGIN 1 cccacgcgtc cggtcgcatc gcacttgtag ctctcgaccc ccgcatctca tccctcctct 61 cgcttagttc agatcgaaat cgcaaatggc gaagattaag atcgggatca atgggttcgg 121 gaggatcggg aggctcgtgg ccagggtggc cctgcagagc gacgacgtcg agctcgtcgc 181 cgtcaacgac cccttcatca ccaccgacta catgacatac atgttcaagt atgacactgt 241 gcacggccag tggaagcatc atgaggttaa ggtgaaggac tccaagaccc ttctcttcgg 301 tgagaaggag gtcaccgtgt tcggctgcag gaaccctaag gagatcccat ggggtgagac 361 tagcgctgag tttgttgtgg agtacactgg tgttttcact gacaaggaca aggccgttgc 421 tcaacttaag ggtggtgcta agaaggtctg // ------------------------------------------------------------------------------- 2.1. LOCUS line The format of LOCUS line in the flat file is shown below; --------- -------- Positions Contents --------- -------- 01-05 'LOCUS' 06-12 spaces 13-28 Locus name 29-29 space 30-40 Length of sequence, right-justified 41-41 space 42-43 'bp' 44-47 spaces 48-54 DNA, RNA, mRNA, rRNA, tRNA or cRNA, left justified 55-55 space 56-63 'linear' followed by two spaces, or 'circular' 64-64 space 65-67 The division code (see '3.1. Division categories') 68-68 space 69-79 Date, in the form dd-MMM-yyyy (e.g., 08-JUL-2002) ------------------------------------------------------------------------------ 2.2. DEFINITION line The definition briefly describes the information of gene(s). "DEFINITION" is constructed by each of the three data banks. 2.3. ACCESSION line This line shows accession number of the entry data. A unique accession number is issued to the data submitter by each of the three data banks. The accession number is composed of 1 alphabet character and 5 digits (ex. A12345) or 2 alphabet characters and 6 digits (ex. AB123456). The former style was used in 1980s, but later the latter style was introduced because of data explosion. All the entries designated by the accession numbers with the prefixes given below have been collected and processed by DDBJ, and the rest have been done by GenBank and EMBL/EBI. ------------------------------------------------------------------------------- C, D, E, AB, AG, AK, AP, AT, AU, AV, BA, BB, BD, BJ, BP, BR, BS, BW, BY, CI, CJ, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, DL, DM, FS, FT, FU ------------------------------------------------------------------------------- You can find the list of the prefixes of the accession numbers at the following URL; http://www.ddbj.nig.ac.jp/sub/prefix.html If multiple entries are united to an entry, or if an entry is extensively modified after the submission, the responsible data banks may assign a new accession number to it. In these cases, the new accession number is called the primary accession number, and the old accession number(s) is/are called the secondary accession number(s). In the flat file, the primary accession number is indicated first, then the secondary accession number(s) follows. You can find the same updated entry with both the primary and the secondary accession numbers. 2.4. VERSION line This line consists of an accession number and a version number, like "AB123456.1", in which the digit(s) after the period is a version number. The data open to public for the first time is version number as "1". The reason for adding VERSION is that since a released sequence sometimes revised by the submitter, the accession number alone cannot specify the sequence in question causing the user a trouble. The number is increased by one every time when a revised sequence is made public. 2.5. KEYWORDS line The data banks describe this line, if necessary. In many cases, the categories of the data (EST, HTG etc.), gene names and product names included in "KEYWORDS". 2.6. SOURCE line This line shows the scientific name (and a corresponding common name, if defined as "Genbank common name" in taxonomy database) on organism from which the sequence is obtained and an organelle type if the sequence is derived from an organelle other than the nucleus. 2.7. REFERENCE line The information on the submitters and references related to the submitted sequence is indicated in REFERENCE line. 2.8. COMMENT line. The information about an entry that cannot be described using FEATURES or the other fields. 2.9. FEATURES line Biological features of a submitted sequence data are described with "Feature" key (the biological nature of the annotated feature), "Location" (the region of the sequence which corresponds to Feature), and "Qualifier" (supplementary information about Feature). The "Feature" and "Qualifier" keys used in the present release is defined by DDBJ/EMBL/GenBank Feature Table: Definition Version 8.2 (December, 2009). The document is continuously updated every half year. You can find its newest version on URL; http://www.ddbj.nig.ac.jp/FT/full_index.html 2.10. BASE COUNT line In the BASE COUNT line of the DDBJ flat file, 9 digits are allocated for each number of a (adenine), c (cytosine), g(guanine) and t (thymine). In the case of RNA sequence, uracil is indicated as "t" according to the rule of the international nucleotide database. 2.11. ORIGIN line The sequence data starts from the next line of ORIGIN. The sequence is indicated as lower case letters, delimited by space per 10 bases, starts a new line by 60 bases. The numbers described at left side of lines mean the ordinal number of the top base of the line. 3. Division categories The present release is divided into 21 categories, called 'division', of organisms and others. The contents of the 21 divisions are shown in the following. See also '6. File categories' and '9. File list' below. HUM; human PRI; primates (other than human) ROD; rodents MAM; mammals (other than primates and rodents) VRT; vertebrates (other than mammals) INV; invertebrates (animals other than vertebrates) PLN; plants, fungi, plastids (eukaryotes other than animals) BCT; bacteria (including both Eubacteria and Archaea) VRL; viruses PHG; bacteriophages ENV; sequences obtained via environmental sampling methods SYN; synthetic constructs (artificially constructed sequences) EST; expressed sequence tags; short single pass cDNA sequences GSS; genome survey sequences; short single pass genomic sequences TSA; transcriptome shotgun assemblies HTC; high throughput cDNA sequences; The sequence submitted from cDNA sequencing projects except for EST. This division is to include unfinished high throughput cDNA sequences, each of which has 5'UTR and 3'UTR at both ends and part of a coding region. The sequence may also include introns. When the sequence becomes finished later, it moves to the corresponding taxonomic division. HTG; high throughput genomic sequences The sequence submitted mainly from genome sequencing projects which regarded a clone as a sequencing unit. STS; sequence tagged sites The tag site for genome sequencing. The information of chromosome, map, is mandatory for this division. PAT; sequence data related to patent applications The data those which the Japanese Patent Office (JPO), United States Patent and Trademark Office (USPTO), the European Patent Office (EPO), and Korean Intellectual Property Office (KIPO) collected, processed and released. See also '3.3. Notice for patent related sequence data' below. UNA; the data not annotated The UNA division is not used for recently submitted sequences. CON; Contig / Constructed To conjugate a series of entries, such as those submitted from a genome project, each of the three data banks constructs an entry and assign an accession number to a large scale sequence dataset. Such entries are classified into the CON division. The entry in the CON division has the information of joined accession numbers instead of the sequence data. The corresponding entries of the CON entry have been submitted to other divisions. The entries and bases in the CON division are not counted in the released numbers given on the top of the release note. 3.1. Notice for patent related sequence data This release includes PAT division for patent related sequence data as described above. The data those which Japanese Patent Office (JPO), United States Patent and Trademark Office (USPTO), European Patent Office (EPO), and Korean Intellectual Property Office (KIPO) collected, processed and released. The prefixes of accession numbers for the patent related sequence data are shown below; --------------------------------------------- JPO : E, BD, DD, DJ, DL, DM, FU KIPO : DI USPTO: I, AR, DZ, EA, GC, GP, GV EPO : A, AX, CQ, CS, FB, GM, GN, HA, HB, HC --------------------------------------------- Note also that unauthorized use of the patented data may cause legal issues for which DDBJ takes no responsibility. 4. DDBJ staff This release is published by the following DDBJ staff. Jun Mashima, Hideo Aono, Yoshiyuki Ehara, Mayumi Ejima, Masato Endo, Masahiro Fujimoto, Daisuke Fukuda, Tatsukazu Hashimoto, Fumie Hirata, Nobuhiro Hoshi, Tsutomu Ikesaka, Fumiyasu Ishikawa, Kazuya Kanno, Shingo Kawahara, Tatsuko Kawamoto, Takahiro Kazama, Satoshi Kitadate, Wataru Kodachi, Yuichi Kodama, Junko Kohira, Tomohiro Koike, Takehide Kosuge, Fumiko Kubodera, Kyungbum Lee, Mika Maki, Haruka Mamiya, Hisako Mashima, Kimiko Mimura, Naoko Murakata, Sachiko Nagira, Masahiko Nagura, Asami Nozaki, Toshihisa Okido, Katsunaga Sakai, Satoshi Saruhashi, Makoto Sato, Yukie Shinyama, Naoki Shiraishi, Rie Sugita, Kimiko Suzuki, Kazuya Takei, Wataru Tanabe, Haru Tsutsui,Hiroaki Yamada, Keisuke Yamamoto, Kenji Yamamoto, Makoto Yamamoto, Emi Yokoyama, Takashi Gojobori, Eli Kaminuma, Osamu Ogasawara, Kosaku Okubo, Toshihisa Takagi and Yasukazu Nakamura Center for Information Biology and DNA Data Bank of Japan National Institute of Genetics Research Organization of Information and Systems Mishima 411-8540, Japan Phone: +81 55 981 6853 FAX: +81 55 981 6849 E-mail: ddbj@ddbj.nig.ac.jp (for general inquiry) ddbjsub@ddbj.nig.ac.jp (for data submission) ddbjupdt@ddbj.nig.ac.jp (for updates and notification of publication) WWW: http://www.ddbj.nig.ac.jp/ (for DDBJ WWW server) http://sakura.ddbj.nig.ac.jp/ (for DDBJ sequence data submission system) 5. Acknowledgment We are grateful to NCBI and EBI for a firm friendship and an excellent collaboration with us. We also thank the Japanese Patent Office for a steady cooperation with us. The operation of DDBJ is supported by the Ministry of Education, Culture, Sports, Science and Technology, and we would gratefully note this here. DDBJ uses the Super-SINET computer network for data collection, data exchange and various services. 6. File categories This release covers 21 categories (see also '3. Division categories'.) of organisms and others as follows: ------------------------------------------------------------------------------ ddbjbct; Category for bacteria ddbjcon; Category for CON (contigs) ddbjenv; Category for ENV (environmental samples) ddbjest; Category for EST (expressed sequence tags) ddbjgss; Category for GSS (genome survey sequences) ddbjhtc; Category for HTC (high throughput cDNA sequences) ddbjhtg; Category for HTG (high throughput genomic sequences) ddbjhum; Category for human ddbjinv; Category for invertebrates ddbjmam; Category for mammals other than primates and rodents ddbjpat; Category for patents ddbjphg; Category for phages ddbjpln; Category for plants ddbjpri; Category for primates other than human ddbjrod; Category for rodents ddbjsts; Category for STS (sequence tagged sites) ddbjsyn; Category for synthetic DNAs ddbjtsa; Category for TSA (transcriptome shotgun assemblies) ddbjuna; Category for unannotated sequences ddbjvrl; Category for viruses ddbjvrt; Category for vertebrates other than mammals ------------------------------------------------------------------------------ Some of above in the present release are recorded in multiple ddbj***###.seq files, each of which at most has 1.5 GB storage capacity as follows, respectively. --------------------- ddbjbct : 8 files ddbjenv : 4 files ddbjest : 142 files ddbjgss : 55 files ddbjhtc : 2 files ddbjhtg : 22 files ddbjhum : 6 files ddbjinv : 4 files ddbjpat : 17 files ddbjpln : 7 files ddbjpri : 2 files ddbjrod : 5 files ddbjsts : 3 files ddbjvrl : 3 files ddbjvrt : 4 files ddbjcon : 21 files --------------------- The index files included in this release are ddbjacc#.idx, ddbjgen.idx, ddbjjou#.idx, and ddbjkey#.idx. See also '9. File list'. All of them except ddbjgen.idx are recorded in multiple ddbj***#.idx files, each of which at most has 1.5 GB storage capacity. 7. Sample of the contents in each file 7.1. Part of the contents in the file 'ddbjbct1.seq' This shows all pieces of information on one entry in DDBJ format. ------------------------------------------------------------------------------ LOCUS D87069 993 bp mRNA linear BCT 05-OCT-2006 DEFINITION Escherichia coli mRNA for RNA polymerase sigma subunit, truncated form of sigma-38, complete cds. ACCESSION D87069 VERSION D87069.1 KEYWORDS RNA polymerase sigma subunit, truncated form of sigma-38. SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 993) AUTHORS Jishage,M. TITLE Direct Submission JOURNAL Submitted (14-AUG-1996) to the DDBJ/EMBL/GenBank databases. Contact:Miki Jishage National Institute of Genetics, Molecular Genetics; Yata 1111, Mishima, Shizuoka 411, Japan REFERENCE 2 AUTHORS Jishage,M. and Ishihama,A. TITLE Variation in RNA polymerase sigma subunit composition within different stocks of Escherichia coli starin W3110 JOURNAL Unpublished (1996) REFERENCE 3 AUTHORS Ivanova,A., Renshaw,M., Guntaka,R. and Eisenstark,A. TITLE DNA base sequence variability in katF (putative sigma factor) gene Escherichia coli JOURNAL Nucleic Acids Res. 20, 5479-5480 (1992) REFERENCE 4 AUTHORS Takayanagi,Y., Tanaka,K. and Takahashi,H. TITLE Structure of the 5' upstream region and the regulation of the rpoS gene of Escherichia coli JOURNAL Mol. Gen. Genet. 243, 525-531 (1994) COMMENT FEATURES Location/Qualifiers source 1..993 /db_xref="taxon:562" /mol_type="mRNA" /organism="Escherichia coli" /strain="W3110" CDS 1..810 /note="the gene has four single base changes, resulting in two amino acid substitutions and an amber mutation" /product="RNA polymerase sigma subunit, truncated form of sigma-38" /protein_id="BAA13238.1" /transl_table=11 /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEYEPSDNDLAEEE LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAK" variation 75 /citation=[3] /replace="t" variation 97 /citation=[3] /replace="t" variation 99 /citation=[3] /replace="t" variation 808 /citation=[3] /replace="t" BASE COUNT 254 a 223 c 291 g 225 t ORIGIN 1 atgagtcaga atacgctgaa agttcatgat ttaaatgaag atgcggaatt tgatgagaac 61 ggagttgagg tttttgacga aaaggcctta gtagaatatg aacccagtga taacgatttg 121 gccgaagagg aactgttatc gcagggagcc acacagcgtg tgttggacgc gactcagctt 181 taccttggtg agattggtta ttcaccactg ttaacggccg aagaagaagt ttattttgcg 241 cgtcgcgcac tgcgtggaga tgtcgcctct cgccgccgga tgatcgagag taacttgcgt 301 ctggtggtaa aaattgcccg ccgttatggc aatcgtggtc tggcgttgct ggaccttatc 361 gaagagggca acctggggct gatccgcgcg gtagagaagt ttgacccgga acgtggtttc 421 cgcttctcaa catacgcaac ctggtggatt cgccagacga ttgaacgggc gattatgaac 481 caaacccgta ctattcgttt gccgattcac atcgtaaagg agctgaacgt ttacctgcga 541 accgcacgtg agttgtccca taagctggac catgaaccaa gtgcggaaga gatcgcagag 601 caactggata agccagttga tgacgtcagc cgtatgcttc gtcttaacga gcgcattacc 661 tcggtagaca ccccgctggg tggtgattcc gaaaaagcgt tgctggacat cctggccgat 721 gaaaaagaga acggtccgga agataccacg caagatgacg atatgaagca gagcatcgtc 781 aaatggctgt tcgagctgaa cgccaaatag cgtgaagtgc tggcacgtcg attcggtttg 841 ctggggtacg aagcggcaac actggaagat gtaggtcgtg aaattggcct cacccgtgaa 901 cgtgttcgcc agattcaggt tgaaggcctg cgccgtttgc gcgaaatcct gcaaacgcag 961 gggctgaata tcgaagcgct gttccgcgag taa // ------------------------------------------------------------------------------ 7.2. Part of the contents in the accession number index file 'ddbjacc1.idx' The following excerpt from the accession number index file illustrates the format of the index. ------------------------------------------------------------------------------ D00001 ECPBPA BCT X04516 D00002 ECPYRC BCT X04469 D00003 HUMP450M HUM D00003 D00004 FLBFLBL40 VRL D00004 D00005 IBAMEM682 VRL D00005 D00006 BACPNS1981 BCT D00006 D00007 CHKCALGRP VRT D00007 D00008 ECPNTAB BCT X04195 D00009 DROPER1 INV D00009 ------------------------------------------------------------------------------ 7.3. Part of the contents in the keyword phrase index file 'ddbjkey1.idx' Keyword phrases consist of names for gene products and other characteristics of sequence entries. ------------------------------------------------------------------------------ "COAT PROTEIN SMO511347 VRL AJ511347 'TNPA GENE UBA564903 BCT AJ564903 'ZINC-FINGER' MOTIF PRNS53 VRL X60546 (+) MATING TYPE SURFACE PROTEIN ABGPSSP PLN M94861 (1,3 TABETGLUB PLN Z22874 (1,3)-BETA-D-GLUCAN BINDING PROTEIN AJ606470 INV AJ606470 (1,3)BETA-GLUCAN SYNTHASE NCU09275 PLN U09275 (1,4)-BETA-D-ARABINOXYLAN ARABINOFURANOHYDROLASE ANAXHA PLN Z78011 ANTUAXHA PLN Z78010 (1,6)-BETA-GLUCAN BIOSYNTHESIS YSAKRE1A PLN M81588 (1-3)-BETA-GLUCANASE NTSP41AGN PLN X81560 PA13BGPT PLN X57794 (1-3,1-4)-BETA-D-GLUCANASE HVBDG PLN X52572 (1-4)-BETA-MANNAN ENDOHYDROLASE CAR278996 PLN AJ278996 CAR293305 PLN AJ293305 (2',5'-OLIGOISOADENYLATE SYNTHETASE-DEPENDENT) AL138776 HUM AL138776 (2'-5') OLIGO(A) SYNTHASE E16 SSO4G06 EST F14610 (2'-5')OLIGOADENYLATE SYNTHETASE HSA225089 HUM AJ225089 HUMSYN25A HUM D00068 SSA225090 MAM AJ225090 (6')-IB' AMINOGLYCOSIDE ACETYLTRANSFERASE AXY278514 BCT AJ278514 PAE291609 BCT AJ291609 (8,11)-LINOLEOYL DESATURASE COF245938 PLN AJ245938 ------------------------------------------------------------------------------ 7.4. Part of the contents in the journal citation index file 'ddbjjou1.idx' The journal citation index file lists all of the citations that appear in the references. ------------------------------------------------------------------------------ (ER) AAPS PHARMSCI. 4 (3), DOI 10.1208/PS040315 (2002) AY170916 ROD AY170916 (ER) AM. J. HUM. GENET. 76 (1) (2004) IN PRESS AY753209S1 HUM AY753209 AY753209S2 HUM AY753210 (ER) ARCH. VIROL. (2004) IN PRESS AF531505 VRL AF531505 AY518899 VRL AY518899 AY518900 VRL AY518900 AY518901 VRL AY518901 AY518902 VRL AY518902 AY518903 VRL AY518903 AY518904 VRL AY518904 AY518905 VRL AY518905 AY518906 VRL AY518906 AY518907 VRL AY518907 AY518908 VRL AY518908 AY518909 VRL AY518909 AY518910 VRL AY518910 AY518911 VRL AY518911 AY518912 VRL AY518912 AY518913 VRL AY518913 AY518914 VRL AY518914 AY518915 VRL AY518915 AY518916 VRL AY518916 AY518917 VRL AY518917 AY518918 VRL AY518918 AY518919 VRL AY518919 AY518920 VRL AY518920 AY518921 VRL AY518921 AY518922 VRL AY518922 AY518923 VRL AY518923 AY518924 VRL AY518924 AY518925 VRL AY518925 AY518926 VRL AY518926 AY518927 VRL AY518927 AY518928 VRL AY518928 AY518929 VRL AY518929 AY518930 VRL AY518930 AY518931 VRL AY518931 AY518932 VRL AY518932 AY521234 VRL AY521234 AY521235 VRL AY521235 AY521236 VRL AY521236 AY521237 VRL AY521237 AY521238 VRL AY521238 (ER) ARTERIOSCLER. THROMB. VASC. BIOL. (2004) IN PRESS AY563557 HUM AY563557 (ER) BIOCHEM. BIOPHYS. RES. COMMUN. 325 (1), 203-214 (2004) AY563137 HUM AY563137 (ER) BIOCHEM. J./10.1042/BJ20030293 HSA496460 HUM AJ496460 ------------------------------------------------------------------------------ 7.5. Part of the contents in the gene name index file 'ddbjgen.idx' This file lists all the gene names that appear in the feature table. ------------------------------------------------------------------------------ 'ARR BX927156 BCT BX927156 'BGLG BX927156 BCT BX927156 'BGLS BX927148 BCT BX927148 'BGLY' BX927156 BCT BX927156 'BRNQ AF305888 BCT AF305888 'COMK AL591983 BCT AL591983 AL596172 BCT AL596172 'CRCB BX927155 BCT BX927155 'CRTI BX927155 BCT BX927155 'DPPE LDDIPEP BCT Z34898 'FIC BX936398 BCT BX936398 ------------------------------------------------------------------------------ 8. Release history Release Date Entries Bases Comments 81 03/10 116,720,237 112,394,932,676 80 12/09 112,314,250 109,636,862,252 SOURCE line modified 79 09/09 108,593,519 106,684,379,504 DBLINK line started PROJECT line terminated 78 06/09 105,737,359 104,597,360,291 77 03/09 102,099,156 101,765,388,414 76 12/08 98,220,409 98,741,908,446 75 09/08 92,840,037 95,219,505,205 TSA division started 74 06/08 87,903,140 91,294,770,939 73 03/08 83,167,582 86,099,950,395 KIPO inclusion started 72 12/07 79,004,098 82,592,245,487 Most of E-mail addresses discarded 71 09/07 76,273,345 79,706,204,461 70 06/07 72,801,679 76,788,510,646 69 03/07 67,523,680 71,775,679,500 PROJECT line started Indexes for categories terminated 68 12/06 64,267,978 68,259,314,742 1.5 GB storage started 67 09/06 61,144,621 65,443,024,193 66 06/06 58,176,628 62,945,843,881 65 03/06 55,890,995 60,564,721,635 TPA subcategories started 64 12/05 52,272,669 56,098,558,378 Some index files split 63 09/05 47,741,593 52,246,110,341 62 06/05 45,249,444 49,158,155,283 ENV division started Version for release note started 61 03/05 43,118,204 47,099,081,750 Changed style of release note 60 12/04 40,583,945 44,416,752,273 /db_xref="H-inv:**" started 59 09/04 37,926,117 42,245,956,937 58 06/04 34,917,581 39,812,635,108 57 03/04 32,693,678 38,008,449,840 56 12/03 30,405,173 36,079,046,032 55 09/03 27,753,140 34,280,225,489 54 06/03 25,149,821 32,162,041,177 53 02/03 23,250,813 29,711,299,332 52 12/02 20,354,812 26,931,456,316 51 09/02 18,401,358 22,782,404,136 TPA started 50 06/02 17,260,693 20,158,357,982 49 04/02 16,503,157 18,579,627,226 48 01/02 15,016,100 16,197,713,855 47 10/01 13,266,610 14,145,671,645 46 07/01 12,313,759 13,037,646,166 45 04/01 11,434,113 12,207,092,905 HTC division started 44 01/01 10,165,597 11,136,298,841 43 10/00 8,666,551 10,034,532,698 42 07/00 7,554,995 8,880,721,093 41 04/00 5,962,608 6,409,581,885 CON division started 40 01/00 5,388,125 4,762,696,173 RNA division terminated 39 10/99 4,810,773 3,728,000,562 NID and PID discarded 38 07/99 4,294,369 3,098,519,597 37 03/99 3,311,627 2,375,261,951 VERSION, /protein_id started 36 01/99 3,073,166 2,190,425,560 35 10/98 2,759,261 1,957,341,169 34 07/98 2,412,785 1,708,580,623 33 04/98 2,174,769 1,479,303,279 32 01/98 1,956,669 1,300,950,613 31 10/97 1,731,532 1,139,869,464 Adoption of the unified taxonomy database 30 07/97 1,534,115 992,788,339 NID and PID terminated 29 04/97 1,270,194 841,415,232 28 01/97 1,154,120 756,785,219 HTG division started ORG division terminated 27 10/96 936,697 608,103,057 GSS division started 26 07/96 835,552 551,932,448 25 04/96 744,490 499,300,364 /translation started 24 01/96 637,508 431,771,652 23 10/95 569,757 390,694,350 22 07/95 437,588 322,982,425 HUM division started 21 04/95 274,596 250,875,023 20 01/95 239,689 231,299,557 19 10/94 204,332 205,274,131 18 07/94 185,230 192,473,021 17 04/94 169,957 179,942,209 16 01/94 154,626 165,017,628 15 10/93 131,649 147,224,690 14 07/93 120,350 138,686,333 JPO inclusion started 13 04/93 112,067 129,784,445 12 01/93 97,683 120,815,244 EST division started 11 07/92 65,693 84,839,075 10 01/92 59,317 77,805,556 GenBank/EMBL inclusion started 9 07/91 1,130 2,002,124 8 01/91 879 1,573,442 7 07/90 681 1,154,211 6 01/90 496 841,236 5 07/89 395 679,378 4 01/89 302 535,985 3 07/88 230 345,850 2 01/88 142 199,392 1 07/87 66 108,970 Started with DDBJ only ------------------ Since release 80 ------------------ The format of the SOURCE line in DDBJ flat file has been changed: The SOURCE lines in some of DDBJ flat file included a common name like as GenBank flat file. The change is shown below ---------------- Old (-rel. 79) ---------------- Format: SOURCE [] Example: SOURCE Homo sapiens mitochondrion ---------------- New (rel. 80-) ---------------- Format: SOURCE [] [()] Example: SOURCE mitochondrion Homo sapiens (human) See also '2. DDBJ flat file format'. ------------------ Since release 79 ------------------ A new line, DBLINK, has replaced PROJECT line: Following the agreement at the INSD collaborative meeting in 2008, the scope of the project ID has expanded to include projects that are not necessarily targeted to the sequencing of a complete genome. In addition, there are other resources such as the Trace Assembly Archive at the NCBI and the like. Therefore, we have decided to replace the PROJECT line by a new line format, "DBLINK". The replacement is illustrated in the following; From the use of the PROJECT line (-release 78); ------------------------------------------------------------------------------- LOCUS AP000000 4700000 bp DNA circular BCT 27-FEB-2009 DEFINITION Escherichia coli DDBJ genomic DNA, complete genome. ACCESSION AP000000 VERSION AP000000.1 PROJECT GenomeProject:99999 KEYWORDS . ------------------------------------------------------------------------------- To the DBLINK line format (release 79-); ------------------------------------------------------------------------------- LOCUS AP000000 4700000 bp DNA circular BCT 27-FEB-2009 DEFINITION Escherichia coli DDBJ genomic DNA, complete genome. ACCESSION AP000000 VERSION AP000000.1 DBLINK Project:99999 KEYWORDS . ------------------------------------------------------------------------------- ------------------ Since release 75 ------------------ A new division for assembled mRNA sequences, Transcriptome Shotgun Assembly (TSA), has been included since the release 75. With new sequencing technologies in use, INSDC have faced many requests to accept assembled EST sequences. These sequence data have become more useful than used to be, although they may not be correctly assembled or exist in nature. Therefore, INSDC decided to collect assembled EST sequences and classified them into the new division 'TSA'. TSA sequences are shotgun assemblies of primary sequences deposited in the EST division of INSDC, race Archive (TA) or Short-Read Archive (SRA). Two specific keywords, "TSA" and "Transcriptome Shotgun Assembly", are present in all TSA entries. The new division code, "TSA", is also described in the the LOCUS line in all TSA entries. No format changes in the flat file are anticipated for the TSA division, however, note that TSA entries make use of the same PRIMARY line that is described for the entries in TPA category. The PRIMARY block contains references to the underlying reads/transcripts that are assembled to construct a TSA record. Note that it is required for a TSA submission to submit sequence data of primary transcripts to the EST division of INSDC, TA, or SRA. More information about how to submit a TSA entry is provided via the following URL; http://www.ddbj.nig.ac.jp/sub/tsa-e.html ------------------ Since release 73 ------------------ Introduction of the sequence data from the Korean Intellectual Property Office: The nucleotide sequence data transferred from Korean Intellectual Property Office (KIPO) have been included in DDBJ release. See also, '3. Division categories' and '3.1. Notice for patent related sequence data'. ------------------ Since release 72 ------------------ Deletion of E-mail address, phone and fax numbers from DDBJ flat file: To follow the Japanese law of protecting personal information, DDBJ deleted both phone and fax numbers, and E-mail address from the flat files of the entries submitted to DDBJ. It would be also helpful to protect DDBJ releases against SPAM mail senders. DDBJ retrofitted most of all entries submitted to DDBJ, not to GenBank or EMBL, by the DDBJ periodical release 72. Previously, the submitter information was described in JOURNAL line at REFERENCE 1 as, -------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Taro Mishima, DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan (E-mail:ddbj@ddbj.nig.ac.jp, URL:http://www.ddbj.nig.ac.jp/, Tel:81-12-345-6789, Fax:81-12-345-9876) -------------------------------------------------------------------------------- After the deletion or the information in question, DDBJ flat file is either one of the following two types; Type 1: Phone and fax numbers and E-mail address are deleted. -------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Contact:Taro Mishima DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan URL :http://www.ddbj.nig.ac.jp/ ------------------------------------------------------------------------------- Type 2: When the submitters wish to keep their contact information disclosed, it is described as, ------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Contact:Taro Mishima DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan URL :http://www.ddbj.nig.ac.jp/ E-mail :ddbj@ddbj.nig.ac.jp Phone :81-12-345-6789 Fax :81-12-345-9876 ------------------------------------------------------------------------------- ------------------ Since release 69 ------------------ Introduction of the project ID at PROJECT line in DDBJ flat file: Following the agreement at the INSD collaborative meeting in 2006, INSDC has started to assign the project ID for submissions from sequencing projects. The description of project ID is shown as below; ---------------------------------------------------------------------------- A unique identifier, assigned at the time of the submission by a sequencing project that informed INSDC of the submission beforehand. It is recommended that the submitter quotes the assigned project ID in all communication with INSDC databases to allow for easier and faster tracking of issues. The project ID field provides an umbrella identifier that points to all related sequence data for the project. ---------------------------------------------------------------------------- The PROJECT lines contain INSDC-assigned ID for the sequencing project. It will be appeared between VERSION and KEYWORDS lines in DDBJ flat files, from the DDBJ periodical release, 69 as shown below. See also '2. DDBJ flat file format'. ---------------------------------------------------------------------------- ACCESSION AB012345 VERSION AB012345.1 PROJECT GenomeProject:123 KEYWORDS . ---------------------------------------------------------------------------- Termination of providing the index files for each category: For users logging in one of our computers (supernig), we provided index files for each category. However, as the computer system in our institute was replaced with a new one which does not have a service using the index files, we terminated providing the index files. ------------------ Since release 68 ------------------ Split of files: We changed the maximum file size from 300 MB to 1.5 GB, because the network capacity has been remarkably increased. Each file named as ddbj***##.seq has at most 1.5 GB storage capacity. See also the sections, '6. File categories' and '9. File list'. ------------------ Since release 64 ------------------ Split of index files: In the present release, some of index files (ddbjacc.idx, ddbjjou.idx, and ddbjkey.idx) have been greater than 2 GB in the file size. So, these have been recorded in multiple ddbj****.idx files, each of which at most has 1.5 GB storage capacity as follows, respectively. See also 6., 7.2., 7.3., 7.4. and 9. ------------------ Since release 62 ------------------ Release version number is introduced: DDBJ has started to include the item, 'version', for its release note, which indicates a version for its periodical release. It is expressed like '62.0', in which the digit(s) after the period is a version number. The reason for adding the version number is that a released data is sometimes revised due to urgent and necessary corrections. The number is increased by one every time when a revised periodical release is made public until the next release. Introduction of ENV division: Recently, the submissions of the sequences derived from environmental samples have rapidly increased. To accommodate such submissions, a new division, ENV, has been created (See also '3.1. Division categories'). This division contains the sequences obtained via direct molecular isolation such as PCR, DGGE, or any anonymous method. In the past, the sequences derived from environmental samples belonged to taxonomic divisions, mainly BCT. At DDBJ, the retrofit to transfer relevant entries from taxonomic divisions to the ENV division starts in the present release, and ends by the next periodical release. Please note that during this transitional period, some entries to be eventually placed in the ENV division will be found in other divisions. Strand information is removed: The strand information of LOCUS line in the flat file has been removed as shown below. See also '2.1. LOCUS line'. ---------------------------------------------------------------------------- Old (-rel. 61): 44-44 space 45-47 spaces, ss- (single-stranded), ds- (double-stranded), or ms- (mixed-stranded) New (rel. 62-): 44-47 spaces ---------------------------------------------------------------------------- ------------------ Since release 61 ------------------ The style of release note (this file) has been changed. Some entries have the sequential format for the secondary accession numbers in the ACCESSION line, in order to make the expression of secondary accession numbers in the past short. For example; ------------------------------------------------------------------------------ Before; ACCESSION AB000802 D85885 D85886 D85887 After; ACCESSION AB000802 D85885-D85887 ------------------------------------------------------------------------------ See also '2.3. ACCESSION line'. ------------------ Since release 60 ------------------ The cross-reference to the H-invitational has been included. ------------------ Since release 56 ------------------ The three data banks have agreed that the maximum length limitation (350 kb) of a submitted sequence be relaxed. The BASE COUNT line of the DDBJ flat file format has been changed, corresponding to the relaxation of the maximum sequence length restriction in the entry that had been practiced at DDBJ/EMBL/GenBank International Nucleotide Sequence Databases. In the BASE COUNT line of the DDBJ flat file, 6 digits had been allocated for each number of a, c, g, t and other bases in the sequence. Hereafter, in the new flat file format, 9 digits are allocated for each number of a, c, g and t, while the numbers of other bases are removed. In accordance with the relaxation of sequence length limitation, GenBank had already dropped the BASE COUNT line from their flat file format from GenBank Release 138 (Oct. 2003). We DDBJ have decided to maintain the BASE COUNT line in our flat file format from the view that GC contents are still important information to characterize the sequence. The changes in the BASE COUNT line are shown below. ---------------------------------------------------------------------------- Old (-rel. 55): 1 6 11 16 21 26 31 36 41 46 51 56 61 66 71 |----|----|----|----|----|----|----|----|----|----|----|----|----|----| BASE COUNT 123456 a 123456 c 123456 g 123456 t 123456 others New (rel. 56-): 1 6 11 16 21 26 31 36 41 46 51 56 61 66 71 |----|----|----|----|----|----|----|----|----|----|----|----|----|----| BASE COUNT 123456789 a 123456789 c 123456789 g 123456789 t ---------------------------------------------------------------------------- ------------------ Since release 54 ------------------ '/sequenced_mol' qualifier has been changed to '/mol_type' qualifier. We accordingly completed retrofitting the pertinent entries. This change was made on the agreement at the INSD collaborative meeting in 2002. ------------------ Since release 51 ------------------ The format of LOCUS line in the flat file has been changed as shown below to adjust to the GenBank format. ------------------------------------------------------------------------------ Old (-rel. 50): LOCUS AB000001 660 bp DNA PLN 01-FEB-2001 New (rel. 51-): LOCUS AB000001 660 bp DNA linear PLN 01-FEB-2001 ------------------------------------------------------------------------------ ------------------ Since release 45 ------------------ The HTC (High Throughput cDNA) division has been included. This is to include unfinished high throughput cDNA sequences, each of which has 5'UTR and 3'UTR at both ends and part of a coding region. The sequence may also include introns. When the sequence becomes finished later, it moves to the corresponding taxonomic division. The sequence is accompanied with a keyword, HTC (High Throughput cDNA), which is dropped when the sequence is finished and moved to a taxonomic division. ------------------ Since release 41 ------------------ The CON division has been included. This division is to show the order of related sequences in a genome, and expressed by join and the accession numbers of the sequences. The contents of the CON division are compiled by the three data banks not by the data submitter. ------------------ Since release 40 ------------------ The RNA division was terminated. The RNA data have been redistributed according to the category of the organism. Therefore, you will find a human RNA sequence, for example, in the HUM division. ------------------ Since release 37 ------------------ The three data banks include the item VERSION in the flat file, which indicates a version of a submitted nucleotide sequence. It is expressed like AB123456.1, in which the digit(s) after the period is a version number. The reason for adding VERSION is that since a released sequence sometimes revised by the submitter, the accession number alone cannot specify the sequence in question causing the user a trouble. The number is increased by one every time when a revised sequence is made public. Accordingly, the translated protein sequence will be accompanied with a /protein_id which is expressed as BAA12345.1, in which the digit(s) after the period is again a version number. The number is increased by one when the corresponding nucleotide sequence is revised and the protein sequence is changed as a result, and when the revised protein sequence is made public. ------------------ Since release 31 ------------------ We have started adopting the unified taxonomy database to unify the biological source of the sequence. The database is made up with scientific names, ID of unidentified organisms, and synthetic constructs etc. ------------------ Since release 30 ------------------ NID and PID were terminated. This change was made on the agreement at the INSD collaborative meeting in 1999. ------------------ Since release 28 ------------------ The HTG (High Throughput Genomic sequence) has been included. This division was created to cope with genome project teams which deal with a clone as a sequencing unit. We terminated the ORG (Organelle) division. Thus, if you are interested in human mitochondrial sequences, for example, you are now advised to refer to the HUM division. ------------------ Since release 27 ------------------ The GSS division has been included. GSS stands for Genome Survey Sequence, which is similar to EST, except that GSS is genomic DNA whereas EST is cDNA. ------------------ Since release 25 ------------------ DDBJ release contains amino acid sequences that were translated from the corresponding nucleotide sequences of the database. In the translation we paid much attention to the fact that some species or organella have a codon different from the universal one, and used the proper codon table. ------------------ Since release 22 ------------------ The HUM division has been included. Human genome projects have probably been most productive and yielded a large number of sequences Thus, we have the human (HUM) division solely for human sequences and the primate (PRI) division for non-human primate sequences. ------------------ Since release 12 ------------------ The EST (Expressed Sequence Tag) division has been included. The number of ESTs has been increasing at an enormous rate and is expected to be growing even more rapidly in the future. Thus, we created a division for ESTs ------------------ Since release 10 ------------------ The sequences submitted to GenBank or EMBL have been included in the release. 9. File list The files in this release are arranged in the following order with non-labeled format. ----------------------------------------------------------------------- file name file size ----------------------------------------------------------------------- ddbjrel.txt (DDBJ release note) 74330 ddbjacc1.idx (Accession number index file 1) 1499999996 ddbjacc2.idx (Accession number index file 2) 1500000031 ddbjacc3.idx (Accession number index file 3) 1500000026 ddbjacc4.idx (Accession number index file 4) 53904615 ddbjgen.idx (Gene name index file) 171204327 ddbjjou1.idx (Journal citation index file 1) 1499999824 ddbjjou2.idx (Journal citation index file 2) 1370765170 ddbjjou3.idx (Journal citation index file 3) 1494907102 ddbjjou4.idx (Journal citation index file 4) 537205097 ddbjkey1.idx (Keyword phrase index file 1) 1499999982 ddbjkey2.idx (Keyword phrase index file 2) 1499999990 ddbjkey3.idx (Keyword phrase index file 3) 1500000020 ddbjkey4.idx (Keyword phrase index file 3) 83365219 ----------------------------------------------------------------------- file name number of entries number of bases file size ----------------------------------------------------------------------- ddbjbct1.seq 130366 610655367 1503054381 ddbjbct2.seq 93049 649320784 1499469437 ddbjbct3.seq 472 671293068 1501277033 ddbjbct4.seq 340 666711647 1512331243 ddbjbct5.seq 432 666044277 1506831530 ddbjbct6.seq 474 658507612 1508648272 ddbjbct7.seq 250865 533249632 1499159175 ddbjbct8.seq 116024 226591198 625434172 ddbjenv1.seq 572505 407602223 1499001637 ddbjenv2.seq 560134 411616748 1499002152 ddbjenv3.seq 535599 428049187 1499001745 ddbjenv4.seq 378263 127487416 763132233 ddbjest1.seq 461400 172635704 1499002222 ddbjest2.seq 488859 191342837 1499000174 ddbjest3.seq 496928 205481337 1499000287 ddbjest4.seq 478955 204194155 1499000421 ddbjest5.seq 546862 291107450 1499000016 ddbjest6.seq 551297 337263298 1499000092 ddbjest7.seq 538654 306774071 1499001534 ddbjest8.seq 400554 128352235 1499002243 ddbjest9.seq 489005 209711596 1499000508 ddbjest10.seq 510689 236343589 1499001362 ddbjest11.seq 469701 200863886 1499000682 ddbjest12.seq 370405 131525579 1499002637 ddbjest13.seq 274503 83703223 1499003450 ddbjest14.seq 274999 108762488 1499000314 ddbjest15.seq 383738 178801548 1499000257 ddbjest16.seq 479728 248599360 1499002509 ddbjest17.seq 463432 241974694 1499001090 ddbjest18.seq 451409 248694396 1499002085 ddbjest19.seq 464788 223975017 1498999962 ddbjest20.seq 462964 280543435 1499002775 ddbjest21.seq 469346 286340904 1499002514 ddbjest22.seq 467268 243033234 1499002142 ddbjest23.seq 446573 262703638 1499002185 ddbjest24.seq 508561 280074843 1499001180 ddbjest25.seq 546435 319162332 1499001711 ddbjest26.seq 413921 209211555 1499001526 ddbjest27.seq 433741 255446560 1499002659 ddbjest28.seq 479438 272012217 1499000726 ddbjest29.seq 516223 261273676 1499001905 ddbjest30.seq 450727 242049996 1499000745 ddbjest31.seq 456259 254286628 1499000735 ddbjest32.seq 441479 288905193 1499003289 ddbjest33.seq 408583 292182606 1499003180 ddbjest34.seq 502753 299334623 1499001791 ddbjest35.seq 637865 366911308 1499002135 ddbjest36.seq 469369 300866501 1499001341 ddbjest37.seq 414040 239734994 1499005419 ddbjest38.seq 258738 96937976 1499000544 ddbjest39.seq 258978 105415154 1499000197 ddbjest40.seq 320234 154310642 1499001835 ddbjest41.seq 472273 268627746 1499001650 ddbjest42.seq 480499 266427409 1499001298 ddbjest43.seq 451215 241370284 1499001451 ddbjest44.seq 480108 281265591 1499001046 ddbjest45.seq 507582 257661426 1499000698 ddbjest46.seq 433849 256526836 1499002016 ddbjest47.seq 554744 285173345 1499002580 ddbjest48.seq 428865 245032970 1499000764 ddbjest49.seq 398298 232320737 1499002926 ddbjest50.seq 262947 133647892 1499000406 ddbjest51.seq 267948 109219198 1499005323 ddbjest52.seq 311231 138298638 1499003185 ddbjest53.seq 420336 235040091 1499000443 ddbjest54.seq 558746 315368714 1499000382 ddbjest55.seq 424185 286291466 1499001755 ddbjest56.seq 441962 243215591 1499002185 ddbjest57.seq 477494 281132871 1499001387 ddbjest58.seq 431934 235996101 1499000038 ddbjest59.seq 477258 266752291 1499002129 ddbjest60.seq 452061 277313967 1499000124 ddbjest61.seq 415760 241235339 1499003471 ddbjest62.seq 493925 332370926 1499001235 ddbjest63.seq 448338 275001978 1499001167 ddbjest64.seq 446936 227083965 1499002318 ddbjest65.seq 438294 271211543 1499002282 ddbjest66.seq 429253 275405595 1499001012 ddbjest67.seq 391881 256708347 1499001161 ddbjest68.seq 432767 238534429 1499000574 ddbjest69.seq 423950 236075586 1499001935 ddbjest70.seq 429369 237885427 1499002973 ddbjest71.seq 429251 227911957 1499001302 ddbjest72.seq 517235 301624219 1499000597 ddbjest73.seq 536106 332118820 1499000503 ddbjest74.seq 580986 335348434 1499001784 ddbjest75.seq 446532 280608479 1499000025 ddbjest76.seq 441326 317705815 1499002877 ddbjest77.seq 442306 282557998 1499000863 ddbjest78.seq 473035 292808341 1499004030 ddbjest79.seq 384580 259810076 1499001319 ddbjest80.seq 381571 273767954 1499000430 ddbjest81.seq 403826 277712957 1499001264 ddbjest82.seq 408699 310532511 1499001406 ddbjest83.seq 482540 301256561 1499000530 ddbjest84.seq 438542 318537975 1499001976 ddbjest85.seq 523990 300597238 1499000501 ddbjest86.seq 588247 199328892 1499000806 ddbjest87.seq 500827 312238301 1499001534 ddbjest88.seq 497847 313596747 1499001368 ddbjest89.seq 510630 310604045 1499001507 ddbjest90.seq 661419 303047267 1499000698 ddbjest91.seq 567719 266615776 1499000114 ddbjest92.seq 512876 315503888 1499000734 ddbjest93.seq 505620 278829203 1499001788 ddbjest94.seq 548041 210917529 1499000576 ddbjest95.seq 512458 319696446 1499000177 ddbjest96.seq 416578 236939548 1499001431 ddbjest97.seq 611983 179503665 1499001493 ddbjest98.seq 506865 269332353 1499002518 ddbjest99.seq 569695 211801575 1499001761 ddbjest100.seq 477723 286089494 1499002383 ddbjest101.seq 496177 333571171 1499002550 ddbjest102.seq 515894 302454647 1499000566 ddbjest103.seq 585294 219261187 1499000277 ddbjest104.seq 547230 288752426 1499001143 ddbjest105.seq 421137 267590512 1499000871 ddbjest106.seq 463321 281308850 1499002896 ddbjest107.seq 448302 285527674 1499003389 ddbjest108.seq 474916 344313313 1499000241 ddbjest109.seq 444082 299243263 1499000887 ddbjest110.seq 406083 275655535 1499002615 ddbjest111.seq 464173 296113945 1499001801 ddbjest112.seq 449991 281129505 1499001282 ddbjest113.seq 427344 266134177 1499002461 ddbjest114.seq 454512 253623132 1499001185 ddbjest115.seq 379361 244368392 1499000447 ddbjest116.seq 531243 246933648 1499003018 ddbjest117.seq 448390 276592533 1499000029 ddbjest118.seq 441998 289056378 1499000135 ddbjest119.seq 485904 293713360 1499001465 ddbjest120.seq 312711 193154517 1499002997 ddbjest121.seq 412650 171698975 1499002036 ddbjest122.seq 501755 216046642 1499000043 ddbjest123.seq 636206 314030949 1499000763 ddbjest124.seq 415656 258994754 1499001494 ddbjest125.seq 578272 285014895 1498999941 ddbjest126.seq 495882 255384706 1499000835 ddbjest127.seq 500726 286795429 1499001121 ddbjest128.seq 462835 49791881 1499002815 ddbjest129.seq 449455 124051277 1499000585 ddbjest130.seq 485108 302192731 1499000221 ddbjest131.seq 428055 292103526 1499001377 ddbjest132.seq 449594 304564104 1499001607 ddbjest133.seq 489274 187366312 1499002469 ddbjest134.seq 447944 288814372 1499003724 ddbjest135.seq 475471 303482765 1499003144 ddbjest136.seq 427709 267589154 1499000759 ddbjest137.seq 469963 277349482 1499000516 ddbjest138.seq 335626 224549505 1499005569 ddbjest139.seq 348736 216350630 1499000365 ddbjest140.seq 431293 261402935 1499001705 ddbjest141.seq 484395 187441237 1499002439 ddbjest142.seq 79940 30564956 258097991 ddbjgss1.seq 478721 345722110 1499002801 ddbjgss2.seq 446199 341986002 1499002198 ddbjgss3.seq 441858 334123325 1499002391 ddbjgss4.seq 565838 273879220 1499000854 ddbjgss5.seq 489647 254212156 1499001540 ddbjgss6.seq 466670 256063443 1499001877 ddbjgss7.seq 392062 194475444 1499001265 ddbjgss8.seq 419098 211195201 1499001975 ddbjgss9.seq 498840 290276842 1499002052 ddbjgss10.seq 557290 311202016 1499000484 ddbjgss11.seq 491787 291639351 1499000686 ddbjgss12.seq 537524 350723820 1499002909 ddbjgss13.seq 519110 362474091 1499000989 ddbjgss14.seq 514893 356029256 1499000619 ddbjgss15.seq 604800 340147523 1499001541 ddbjgss16.seq 606230 368857065 1499000379 ddbjgss17.seq 563549 319771250 1498999921 ddbjgss18.seq 522949 373413817 1499000451 ddbjgss19.seq 511682 339428289 1499001675 ddbjgss20.seq 576244 368194097 1499002125 ddbjgss21.seq 579462 413503852 1499001273 ddbjgss22.seq 537059 322172199 1499001769 ddbjgss23.seq 481107 285431130 1499002773 ddbjgss24.seq 518514 340084863 1499002647 ddbjgss25.seq 529719 337236618 1499001598 ddbjgss26.seq 538493 353111618 1499001001 ddbjgss27.seq 591959 291304310 1499001629 ddbjgss28.seq 576963 287991815 1499001182 ddbjgss29.seq 554962 323723370 1499001056 ddbjgss30.seq 473920 355110931 1499000655 ddbjgss31.seq 482943 370613782 1499002372 ddbjgss32.seq 546163 354624569 1498999935 ddbjgss33.seq 554404 325585292 1499003045 ddbjgss34.seq 469796 357664696 1499003262 ddbjgss35.seq 541262 335618824 1499000174 ddbjgss36.seq 507241 258329054 1499001540 ddbjgss37.seq 571940 297305518 1499001766 ddbjgss38.seq 389729 311646427 1499000733 ddbjgss39.seq 411724 336328806 1499000049 ddbjgss40.seq 427705 346203281 1499001448 ddbjgss41.seq 413544 336242341 1498999932 ddbjgss42.seq 424419 345781784 1499001680 ddbjgss43.seq 421050 342506571 1499000891 ddbjgss44.seq 416902 342656136 1499003187 ddbjgss45.seq 532597 330138728 1499001530 ddbjgss46.seq 567644 361180011 1499002303 ddbjgss47.seq 595414 402860047 1499001467 ddbjgss48.seq 581158 420081027 1499002007 ddbjgss49.seq 453338 270492886 1499000897 ddbjgss50.seq 516243 334557684 1499001778 ddbjgss51.seq 530875 356057829 1499000920 ddbjgss52.seq 506532 437992325 1499001965 ddbjgss53.seq 540571 372839056 1498999993 ddbjgss54.seq 544075 310427027 1499000404 ddbjgss55.seq 180093 109201560 494372499 ddbjhtc1.seq 278486 362546382 1499004228 ddbjhtc2.seq 282726 290625757 1034670597 ddbjhtg1.seq 11401 1118106723 1499008620 ddbjhtg2.seq 7563 1118398508 1499251637 ddbjhtg3.seq 5911 1130497766 1499009700 ddbjhtg4.seq 5461 1140580915 1499537047 ddbjhtg5.seq 5340 1144125141 1499232449 ddbjhtg6.seq 5356 1144286293 1499370711 ddbjhtg7.seq 6591 1132421303 1499104905 ddbjhtg8.seq 6846 1142971409 1499053643 ddbjhtg9.seq 6270 1139384974 1499082077 ddbjhtg10.seq 6326 1133222696 1499124241 ddbjhtg11.seq 7039 1123420770 1499156608 ddbjhtg12.seq 7002 1125381807 1499079276 ddbjhtg13.seq 6949 1141393403 1499015447 ddbjhtg14.seq 6972 1135102208 1499201310 ddbjhtg15.seq 6750 1141300958 1499134405 ddbjhtg16.seq 6329 1138766462 1499056813 ddbjhtg17.seq 6616 1139413290 1499057802 ddbjhtg18.seq 8237 1145874190 1499075365 ddbjhtg19.seq 6169 1133756289 1499131414 ddbjhtg20.seq 6617 1159081975 1499125302 ddbjhtg21.seq 6600 1159381576 1499217501 ddbjhtg22.seq 1599 238760882 310419484 ddbjhum1.seq 31076 1044879929 1499115096 ddbjhum2.seq 8099 1069357032 1499060383 ddbjhum3.seq 146117 823301408 1499034384 ddbjhum4.seq 21786 1073438928 1499039616 ddbjhum5.seq 251383 560261258 1499003681 ddbjhum6.seq 38853 71582956 173844851 ddbjinv1.seq 238016 697908287 1499664989 ddbjinv2.seq 433340 445688906 1499000525 ddbjinv3.seq 269024 625968341 1499006027 ddbjinv4.seq 17868 78704057 172066692 ddbjmam.seq 224869 626287992 1291266737 ddbjpat1.seq 1034556 519795677 1499000063 ddbjpat2.seq 776049 493329075 1499001574 ddbjpat3.seq 739345 347660224 1499000703 ddbjpat4.seq 702751 595136848 1499159322 ddbjpat5.seq 733075 398324077 1499000948 ddbjpat6.seq 741112 330131705 1499000350 ddbjpat7.seq 689655 384962560 1499039542 ddbjpat8.seq 740510 541658198 1499033549 ddbjpat9.seq 928037 520984664 1499000907 ddbjpat10.seq 607184 479510362 1499001094 ddbjpat11.seq 893952 307362574 1498999954 ddbjpat12.seq 830911 613899462 1499000484 ddbjpat13.seq 946674 426113703 1499000694 ddbjpat14.seq 1232977 434545236 1499001652 ddbjpat15.seq 1317308 194499348 1499000140 ddbjpat16.seq 706749 512028010 1499000458 ddbjpat17.seq 38534 9458278 39775204 ddbjphg.seq 5365 40485495 99526588 ddbjpln1.seq 115278 925610065 1499001061 ddbjpln2.seq 248889 550695564 1499005282 ddbjpln3.seq 71896 915644855 1499002013 ddbjpln4.seq 323573 558129992 1499026589 ddbjpln5.seq 438686 466321591 1499001087 ddbjpln6.seq 468998 439964895 1499002050 ddbjpln7.seq 8504 19507564 49377638 ddbjpri1.seq 49324 1078498158 1499083426 ddbjpri2.seq 29104 115554192 209988281 ddbjrod1.seq 35363 1017630010 1499030949 ddbjrod2.seq 5889 1092346732 1499180950 ddbjrod3.seq 41057 1053692149 1499243645 ddbjrod4.seq 78144 889927254 1499048117 ddbjrod5.seq 210788 176594776 588122268 ddbjsts1.seq 415876 209736286 1499003682 ddbjsts2.seq 338113 238194350 1499001337 ddbjsts3.seq 557390 181958687 1471707877 ddbjsyn.seq 91573 139196205 491692608 ddbjtsa.seq 388617 138791977 837090494 ddbjuna.seq 288 484315 1395501 ddbjvrl1.seq 394886 403173985 1499002649 ddbjvrl2.seq 359704 425495621 1499467821 ddbjvrl3.seq 52318 51794803 186305262 ddbjvrt1.seq 242310 683261257 1499002592 ddbjvrt2.seq 64226 1006697053 1499037889 ddbjvrt3.seq 289942 682750873 1499002615 ddbjvrt4.seq 69066 89599533 254740710 ------------------------------------------------------------------------------ Total 116720237 112394932676 412627436646 ddbjcon1.seq 258551 0 1498997480 ddbjcon2.seq 255336 0 1499001979 ddbjcon3.seq 544179 0 1499000248 ddbjcon4.seq 389971 0 1499000001 ddbjcon5.seq 391706 0 1499001168 ddbjcon6.seq 278530 0 1499042617 ddbjcon7.seq 255471 0 1500126387 ddbjcon8.seq 382212 0 1499157325 ddbjcon9.seq 333003 0 1499000041 ddbjcon10.seq 250015 0 1499003192 ddbjcon11.seq 225538 0 1499001213 ddbjcon12.seq 244014 0 1499004187 ddbjcon13.seq 266968 0 1499003088 ddbjcon14.seq 275728 0 1499001356 ddbjcon15.seq 321904 0 1499000995 ddbjcon16.seq 279242 0 1499004569 ddbjcon17.seq 275918 0 1499003975 ddbjcon18.seq 289883 0 1499003479 ddbjcon19.seq 267324 0 1499000401 ddbjcon20.seq 255535 0 1499000609 ddbjcon21.seq 29770 0 189358982 The entries and bases in the CON division are not counted in the numbers given on the top of the release note or 'Total' on the above table.