DNA Data Bank of Japan DNA Database Release 84.0, Dec. 2010, including 128,607,782 entries, 120,919,931,265 bases Last published date in the present release: November 26, 2010 ------------------------------------------------------------------------------- Table of contents ------------------------------------------------------------------------------- 1. Introduction 1.1. Announcement for changes in the present release 1.2. Announcement for the forthcoming changes 2. DDBJ flat file format 2.1. LOCUS line 2.2. DEFINITION line 2.3. ACCESSION line 2.4. VERSION line 2.5. KEYWORDS line 2.6. SOURCE line 2.7. REFERENCE line 2.8. COMMENT line 2.9. FEATURES line 2.10. BASE COUNT line 2.11. ORIGIN line 3. Division categories 3.1. Notice for patent related sequence data 4. DDBJ staff 5. Acknowledgment 6. File categories 7. Sample of the contents in each file 7.1. Part of the contents in the file 'ddbjbct1.seq' 7.2. Part of the contents in the accession number index file 'ddbjacc1.idx' 7.3. Part of the contents in the keyword phrase index file 'ddbjkey1.idx' 7.4. Part of the contents in the journal citation index file 'ddbjjou1.idx' 7.5. Part of the contents in the gene name index 'ddbjgen.idx' 8. Release history 9. File list ------------------------------------------------------------------------------- 1. Introduction The present release contains the newest data prepared by the DNA Data Bank of Japan (DDBJ), GenBank (*), and EMBL-Bank/European Bioinformatics Institute (EMBL-Bank/EBI) as of November 26, 2010. This unified database was made possible thanks to the international collaboration among the three data banks. All the entries have accordingly been annotated using the feature keys common to them. In 2005, DDBJ, EMBL-Bank and GenBank agreed to call their collaboration "the International Nucleotide Sequence Database Collaboration (INSDC); http://www.insdc.org " and to call the unified nucleotide sequence database "the International Nucleotide Sequence Database (INSD)". *'GenBank' is a trademark of NIH, USA, and is operated by National Center for Biotechnology Information (NCBI) at NIH. This database may be copied and redistributed without permission on the condition that all the statements in this release note are reproduced in each copy. See also '3.1. Notice for patent related sequence data' below. 1.1. Announcement for changes in the present release Nothing particular. 1.2. Announcement for the forthcoming changes Revision of the DDBJ/EMBL/GenBank Feature Table: Definition: Following the agreement at the INSD collaborative meeting in 2010, the document, DDBJ/EMBL/GenBank Feature Table: Definition, will be revised. See also '2.9. FEATURES line' below. The revised points are introduced in advance on the following URL; http://www.ddbj.nig.ac.jp/insdc/icm2010-e.html#ft At DDBJ, the retrofit for this revision will be completed by the next periodical release to be published in March 2011. Please note that during this transitional period, some entries will be retrofitted. 2. DDBJ flat file format The database is a collection of "entry" which is the unit of the data. The entries submitted to databanks were processed and publicized according to the DDBJ format for distribution (flat file). The flat file includes the sequence and the information of submitters, references, source organisms, and "feature" information, etc. The items of the DDBJ flat file are explained at following; ------------------------------------------------------------------------------- LOCUS AB000000 450 bp mRNA linear HUM 08-JUL-2002 DEFINITION Homo sapiens GAPD mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds. ACCESSION AB000000 VERSION AB000000.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 450) AUTHORS Mishima,H. and Shizuoka,T. TITLE Direct Submission JOURNAL Submitted (30-NOV-2000) to the DDBJ/EMBL/GenBank databases. Contact:Hanako Mishima National Institute of Genetics, DNA Data Bank of Japan; 1111, Yata, Mishima, Shizuoka 411-8540, Japan REFERENCE 2 AUTHORS Mishima,H., Shizuoka,T. and Fuji,I. TITLE Glyceraldehyde-3-phosphate dehydrogenase expressed in human liver JOURNAL Unpublished (2002) COMMENT Human cDNA sequencing project. FEATURES Location/Qualifiers source 1..450 /chromosome="12" /clone="GT200015" /clone_lib="lambda gt11 human liver cDNA (GeneTech. No.20)" /map="12p13" /mol_type="mRNA" /organism="Homo sapiens" /tissue_type="liver" CDS 86..>450 /codon_start=1 /gene="GAPD" /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="BAA12345.1" /transl_table=1 /translation="MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMT YMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPKEIPWGETSAEFVVEYTG VFTDKDKAVAQLKGGAKKV" BASE COUNT 102 a 119 c 131 g 98 t ORIGIN 1 cccacgcgtc cggtcgcatc gcacttgtag ctctcgaccc ccgcatctca tccctcctct 61 cgcttagttc agatcgaaat cgcaaatggc gaagattaag atcgggatca atgggttcgg 121 gaggatcggg aggctcgtgg ccagggtggc cctgcagagc gacgacgtcg agctcgtcgc 181 cgtcaacgac cccttcatca ccaccgacta catgacatac atgttcaagt atgacactgt 241 gcacggccag tggaagcatc atgaggttaa ggtgaaggac tccaagaccc ttctcttcgg 301 tgagaaggag gtcaccgtgt tcggctgcag gaaccctaag gagatcccat ggggtgagac 361 tagcgctgag tttgttgtgg agtacactgg tgttttcact gacaaggaca aggccgttgc 421 tcaacttaag ggtggtgcta agaaggtctg // ------------------------------------------------------------------------------- 2.1. LOCUS line The format of LOCUS line in the flat file is shown below; --------- -------- Positions Contents --------- -------- 01-05 'LOCUS' 06-12 spaces 13-28 Locus name 29-29 space 30-40 Length of sequence, right-justified 41-41 space 42-43 'bp' 44-47 spaces 48-54 DNA, RNA, mRNA, rRNA, tRNA or cRNA, left justified 55-55 space 56-63 'linear' followed by two spaces, or 'circular' 64-64 space 65-67 The division code (see '3.1. Division categories') 68-68 space 69-79 Date, in the form dd-MMM-yyyy (e.g., 08-JUL-2002) ------------------------------------------------------------------------------ 2.2. DEFINITION line The definition briefly describes the information of gene(s). "DEFINITION" is constructed by each of the three data banks. 2.3. ACCESSION line This line shows accession number of the entry data. A unique accession number is issued to the data submitter by each of the three data banks. The accession number is composed of 1 alphabet character and 5 digits (ex. A12345) or 2 alphabet characters and 6 digits (ex. AB123456). The former style was used in 1980s, but later the latter style was introduced because of data explosion. All the entries designated by the accession numbers with the prefixes given below have been collected and processed by DDBJ, and the rest have been done by GenBank and EMBL-Bank/EBI. ------------------------------------------------------------------------------- C, D, E, AB, AG, AK, AP, AT, AU, AV, BA, BB, BD, BJ, BP, BS, BW, BY, CI, CJ, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, DL, DM, FS, FT, FU, FV, FW, FY ------------------------------------------------------------------------------- You can find the list of the prefixes of the accession numbers at the following URL; http://www.ddbj.nig.ac.jp/sub/prefix.html If multiple entries are united to an entry, or if an entry is extensively modified after the submission, the responsible data banks may assign a new accession number to it. In these cases, the new accession number is called the primary accession number, and the old accession number(s) is/are called the secondary accession number(s). In the flat file, the primary accession number is indicated first, then the secondary accession number(s) follows. You can find the same updated entry with both the primary and the secondary accession numbers. 2.4. VERSION line This line consists of an accession number and a version number, like "AB123456.1", in which the digit(s) after the period is a version number. The data open to public for the first time is version number as "1". The reason for adding VERSION is that since a released sequence sometimes revised by the submitter, the accession number alone cannot specify the sequence in question causing the user a trouble. The number is increased by one every time when a revised sequence is made public. 2.5. KEYWORDS line The data banks describe this line, if necessary. In many cases, the categories of the data (EST, HTG etc.), gene names and product names included in "KEYWORDS". 2.6. SOURCE line This line shows the scientific name (and a corresponding common name, if defined as "Genbank common name" in taxonomy database) on organism from which the sequence is obtained and an organelle type if the sequence is derived from an organelle other than the nucleus. 2.7. REFERENCE line The information on the submitters and references related to the submitted sequence is indicated in REFERENCE line. 2.8. COMMENT line. The information about an entry that cannot be described using FEATURES or the other fields. 2.9. FEATURES line Biological features of a submitted sequence data are described with "Feature" key (the biological nature of the annotated feature), "Location" (the region of the sequence which corresponds to Feature), and "Qualifier" (supplementary information about Feature). The "Feature" and "Qualifier" keys used in the present release is defined by DDBJ/EMBL/GenBank Feature Table: Definition Version 8.3 (April, 2010). The document is continuously updated every half year. You can find its newest version on URL; http://www.ddbj.nig.ac.jp/FT/full_index.html 2.10. BASE COUNT line In the BASE COUNT line of the DDBJ flat file, 9 digits are allocated for each number of a (adenine), c (cytosine), g(guanine) and t (thymine). In the case of RNA sequence, uracil is indicated as "t" according to the rule of the international nucleotide database. 2.11. ORIGIN line The sequence data starts from the next line of ORIGIN. The sequence is indicated as lower case letters, delimited by space per 10 bases, starts a new line by 60 bases. The numbers described at left side of lines mean the ordinal number of the top base of the line. 3. Division categories The present release is divided into 21 categories, called 'division', of organisms and others. The contents of the 21 divisions are shown in the following. See also '6. File categories' and '9. File list' below. HUM; human PRI; primates (other than human) ROD; rodents MAM; mammals (other than primates and rodents) VRT; vertebrates (other than mammals) INV; invertebrates (animals other than vertebrates) PLN; plants, fungi, plastids (eukaryotes other than animals) BCT; bacteria (including both Eubacteria and Archaea) VRL; viruses PHG; bacteriophages ENV; sequences obtained via environmental sampling methods SYN; synthetic constructs (artificially constructed sequences) EST; expressed sequence tags; short single pass cDNA sequences GSS; genome survey sequences; short single pass genomic sequences TSA; transcriptome shotgun assemblies HTC; high throughput cDNA sequences; The sequence submitted from cDNA sequencing projects except for EST. This division is to include unfinished high throughput cDNA sequences, each of which has 5'UTR and 3'UTR at both ends and part of a coding region. The sequence may also include introns. When the sequence becomes finished later, it moves to the corresponding taxonomic division. HTG; high throughput genomic sequences The sequence submitted mainly from genome sequencing projects which regarded a clone as a sequencing unit. STS; sequence tagged sites The tag site for genome sequencing. The information of chromosome, map, is mandatory for this division. PAT; sequence data related to patent applications The data those which the Japan Patent Office (JPO), United States Patent and Trademark Office (USPTO), the European Patent Office (EPO), and Korean Intellectual Property Office (KIPO) collected, processed and released. See also '3.3. Notice for patent related sequence data' below. UNA; the data not annotated The UNA division is not used for recently submitted sequences. CON; Contig / Constructed To conjugate a series of entries, such as those submitted from a genome project, each of the three data banks constructs an entry and assign an accession number to a large scale sequence dataset. Such entries are classified into the CON division. The entry in the CON division has the information of joined accession numbers instead of the sequence data. The corresponding entries of the CON entry have been submitted to other divisions. The entries and bases in the CON division are not counted in the released numbers given on the top of the release note. 3.1. Notice for patent related sequence data This release includes PAT division for patent related sequence data as described above. The data those which Japan Patent Office (JPO), United States Patent and Trademark Office (USPTO), European Patent Office (EPO), and Korean Intellectual Property Office (KIPO) collected, processed and released. Sequence data in patent claims to KIPO were properly processed and submitted to DDBJ by Byungwook Lee at Korean Bioinformation Center in collaboration with KIPO. The prefixes of accession numbers for the patent related sequence data are shown below; JPO : E, BD, DD, DJ, DL, DM, FU, FV, FW KIPO : DI USPTO: I, AR, DZ, EA, GC, GP, GV, GX EPO : A, AX, CQ, CS, FB, GM, GN, HA, HB, HC, HD, HH, HI Note also that unauthorized use of the patented data may cause legal issues for which DDBJ takes no responsibility. 4. DDBJ staff This release is published by the following DDBJ staff. Jun Mashima, Hideo Aono, Yoshiyuki Ehara, Mayumi Ejima, Masato Endo, Masahiro Fujimoto, Daisuke Fukuda, Tatsukazu Hashimoto, Fumie Hirata, Nobuhiro Hoshi, Fumiyasu Ishikawa, Kazuya Kanno, Shingo Kawahara, Tatsuko Kawamoto, Takahiro Kazama, Satoshi Kitadate, Wataru Kodachi, Yuichi Kodama, Junko Kohira, Takehide Kosuge, Fumiko Kubodera, Kyungbum Lee, Mika Maki, Haruka Mamiya, Hisako Mashima, Kimiko Mimura, Yoshihisa Munakata, Naoko Murakata, Sachiko Nagira, Masahiko Nagura, Asami Nozaki, Toshihisa Okido, Katsunaga Sakai, Masakazu Sano, Satoshi Saruhashi, Makoto Sato, Yukie Shinyama, Naoki Shiraishi, Rie Sugita, Hiroshi Suzuki, Kimiko Suzuki, Kazuya Takei, Wataru Tanabe, Haru Tsutsui, Koji Watanabe, Hiroaki Yamada, Kenji Yamamoto, Emi Yokoyama, Takashi Gojobori, Eli Kaminuma, Osamu Ogasawara, Kosaku Okubo, Toshihisa Takagi, Munetaka Takeuchi and Yasukazu Nakamura, Center for Information Biology and DNA Data Bank of Japan National Institute of Genetics Research Organization of Information and Systems Mishima 411-8540, Japan Phone: +81 55 981 6853 FAX: +81 55 981 6849 E-mail: ddbj@ddbj.nig.ac.jp (for general inquiry) ddbjsub@ddbj.nig.ac.jp (for data submission) ddbjupdt@ddbj.nig.ac.jp (for updates and notification of publication) WWW: http://www.ddbj.nig.ac.jp/ (for DDBJ WWW server) http://sakura.ddbj.nig.ac.jp/ (for DDBJ sequence data submission system) 5. Acknowledgment We are grateful to NCBI and EBI for a firm friendship and an excellent collaboration with us. We also thank JPO and KIPO for a steady cooperation with us. The operation of DDBJ is supported by the Ministry of Education, Culture, Sports, Science and Technology, and we would gratefully note this here. DDBJ uses the Super-SINET computer network for data collection, data exchange and various services. 6. File categories This release covers 21 categories (see also '3. Division categories'.) of organisms and others as follows: ------------------------------------------------------------------------------ ddbjbct; Category for bacteria ddbjcon; Category for CON (contigs) ddbjenv; Category for ENV (environmental samples) ddbjest; Category for EST (expressed sequence tags) ddbjgss; Category for GSS (genome survey sequences) ddbjhtc; Category for HTC (high throughput cDNA sequences) ddbjhtg; Category for HTG (high throughput genomic sequences) ddbjhum; Category for human ddbjinv; Category for invertebrates ddbjmam; Category for mammals other than primates and rodents ddbjpat; Category for patents ddbjphg; Category for phages ddbjpln; Category for plants ddbjpri; Category for primates other than human ddbjrod; Category for rodents ddbjsts; Category for STS (sequence tagged sites) ddbjsyn; Category for synthetic DNAs ddbjtsa; Category for TSA (transcriptome shotgun assemblies) ddbjuna; Category for unannotated sequences ddbjvrl; Category for viruses ddbjvrt; Category for vertebrates other than mammals ------------------------------------------------------------------------------ Some of above in the present release are recorded in multiple ddbj***###.seq files, each of which at most has 1.5 GB storage capacity as follows, respectively. --------------------- ddbjbct : 9 files ddbjenv : 6 files ddbjest : 146 files ddbjgss : 59 files ddbjhtc : 2 files ddbjhtg : 22 files ddbjhum : 6 files ddbjinv : 4 files ddbjpat : 22 files ddbjpln : 7 files ddbjpri : 2 files ddbjrod : 5 files ddbjsts : 4 files ddbjtsa : 3 files ddbjvrl : 3 files ddbjvrt : 4 files ddbjcon : 22 files --------------------- The index files included in this release are ddbjacc#.idx, ddbjgen.idx, ddbjjou#.idx, and ddbjkey#.idx. See also '9. File list'. All of them except ddbjgen.idx are recorded in multiple ddbj***#.idx files, each of which at most has 1.5 GB storage capacity. 7. Sample of the contents in each file 7.1. Part of the contents in the file 'ddbjbct1.seq' This shows all pieces of information on one entry in DDBJ format. ------------------------------------------------------------------------------ LOCUS D87069 993 bp mRNA linear BCT 05-OCT-2006 DEFINITION Escherichia coli mRNA for RNA polymerase sigma subunit, truncated form of sigma-38, complete cds. ACCESSION D87069 VERSION D87069.1 KEYWORDS RNA polymerase sigma subunit, truncated form of sigma-38. SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 993) AUTHORS Jishage,M. TITLE Direct Submission JOURNAL Submitted (14-AUG-1996) to the DDBJ/EMBL/GenBank databases. Contact:Miki Jishage National Institute of Genetics, Molecular Genetics; Yata 1111, Mishima, Shizuoka 411, Japan REFERENCE 2 AUTHORS Jishage,M. and Ishihama,A. TITLE Variation in RNA polymerase sigma subunit composition within different stocks of Escherichia coli starin W3110 JOURNAL Unpublished (1996) REFERENCE 3 AUTHORS Ivanova,A., Renshaw,M., Guntaka,R. and Eisenstark,A. TITLE DNA base sequence variability in katF (putative sigma factor) gene Escherichia coli JOURNAL Nucleic Acids Res. 20, 5479-5480 (1992) REFERENCE 4 AUTHORS Takayanagi,Y., Tanaka,K. and Takahashi,H. TITLE Structure of the 5' upstream region and the regulation of the rpoS gene of Escherichia coli JOURNAL Mol. Gen. Genet. 243, 525-531 (1994) COMMENT FEATURES Location/Qualifiers source 1..993 /db_xref="taxon:562" /mol_type="mRNA" /organism="Escherichia coli" /strain="W3110" CDS 1..810 /note="the gene has four single base changes, resulting in two amino acid substitutions and an amber mutation" /product="RNA polymerase sigma subunit, truncated form of sigma-38" /protein_id="BAA13238.1" /transl_table=11 /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEYEPSDNDLAEEE LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAK" variation 75 /citation=[3] /replace="t" variation 97 /citation=[3] /replace="t" variation 99 /citation=[3] /replace="t" variation 808 /citation=[3] /replace="t" BASE COUNT 254 a 223 c 291 g 225 t ORIGIN 1 atgagtcaga atacgctgaa agttcatgat ttaaatgaag atgcggaatt tgatgagaac 61 ggagttgagg tttttgacga aaaggcctta gtagaatatg aacccagtga taacgatttg 121 gccgaagagg aactgttatc gcagggagcc acacagcgtg tgttggacgc gactcagctt 181 taccttggtg agattggtta ttcaccactg ttaacggccg aagaagaagt ttattttgcg 241 cgtcgcgcac tgcgtggaga tgtcgcctct cgccgccgga tgatcgagag taacttgcgt 301 ctggtggtaa aaattgcccg ccgttatggc aatcgtggtc tggcgttgct ggaccttatc 361 gaagagggca acctggggct gatccgcgcg gtagagaagt ttgacccgga acgtggtttc 421 cgcttctcaa catacgcaac ctggtggatt cgccagacga ttgaacgggc gattatgaac 481 caaacccgta ctattcgttt gccgattcac atcgtaaagg agctgaacgt ttacctgcga 541 accgcacgtg agttgtccca taagctggac catgaaccaa gtgcggaaga gatcgcagag 601 caactggata agccagttga tgacgtcagc cgtatgcttc gtcttaacga gcgcattacc 661 tcggtagaca ccccgctggg tggtgattcc gaaaaagcgt tgctggacat cctggccgat 721 gaaaaagaga acggtccgga agataccacg caagatgacg atatgaagca gagcatcgtc 781 aaatggctgt tcgagctgaa cgccaaatag cgtgaagtgc tggcacgtcg attcggtttg 841 ctggggtacg aagcggcaac actggaagat gtaggtcgtg aaattggcct cacccgtgaa 901 cgtgttcgcc agattcaggt tgaaggcctg cgccgtttgc gcgaaatcct gcaaacgcag 961 gggctgaata tcgaagcgct gttccgcgag taa // ------------------------------------------------------------------------------ 7.2. Part of the contents in the accession number index file 'ddbjacc1.idx' The following excerpt from the accession number index file illustrates the format of the index. ------------------------------------------------------------------------------ D00001 ECPBPA BCT X04516 D00002 ECPYRC BCT X04469 D00003 HUMP450M HUM D00003 D00004 FLBFLBL40 VRL D00004 D00005 IBAMEM682 VRL D00005 D00006 BACPNS1981 BCT D00006 D00007 CHKCALGRP VRT D00007 D00008 ECPNTAB BCT X04195 D00009 DROPER1 INV D00009 ------------------------------------------------------------------------------ 7.3. Part of the contents in the keyword phrase index file 'ddbjkey1.idx' Keyword phrases consist of names for gene products and other characteristics of sequence entries. ------------------------------------------------------------------------------ "COAT PROTEIN SMO511347 VRL AJ511347 'TNPA GENE UBA564903 BCT AJ564903 'ZINC-FINGER' MOTIF PRNS53 VRL X60546 (+) MATING TYPE SURFACE PROTEIN ABGPSSP PLN M94861 (1,3 TABETGLUB PLN Z22874 (1,3)-BETA-D-GLUCAN BINDING PROTEIN AJ606470 INV AJ606470 (1,3)BETA-GLUCAN SYNTHASE NCU09275 PLN U09275 (1,4)-BETA-D-ARABINOXYLAN ARABINOFURANOHYDROLASE ANAXHA PLN Z78011 ANTUAXHA PLN Z78010 (1,6)-BETA-GLUCAN BIOSYNTHESIS YSAKRE1A PLN M81588 (1-3)-BETA-GLUCANASE NTSP41AGN PLN X81560 PA13BGPT PLN X57794 (1-3,1-4)-BETA-D-GLUCANASE HVBDG PLN X52572 (1-4)-BETA-MANNAN ENDOHYDROLASE CAR278996 PLN AJ278996 CAR293305 PLN AJ293305 (2',5'-OLIGOISOADENYLATE SYNTHETASE-DEPENDENT) AL138776 HUM AL138776 (2'-5') OLIGO(A) SYNTHASE E16 SSO4G06 EST F14610 (2'-5')OLIGOADENYLATE SYNTHETASE HSA225089 HUM AJ225089 HUMSYN25A HUM D00068 SSA225090 MAM AJ225090 (6')-IB' AMINOGLYCOSIDE ACETYLTRANSFERASE AXY278514 BCT AJ278514 PAE291609 BCT AJ291609 (8,11)-LINOLEOYL DESATURASE COF245938 PLN AJ245938 ------------------------------------------------------------------------------ 7.4. Part of the contents in the journal citation index file 'ddbjjou1.idx' The journal citation index file lists all of the citations that appear in the references. ------------------------------------------------------------------------------ (ER) AAPS PHARMSCI. 4 (3), DOI 10.1208/PS040315 (2002) AY170916 ROD AY170916 (ER) AM. J. HUM. GENET. 76 (1) (2004) IN PRESS AY753209S1 HUM AY753209 AY753209S2 HUM AY753210 (ER) ARCH. VIROL. (2004) IN PRESS AF531505 VRL AF531505 AY518899 VRL AY518899 AY518900 VRL AY518900 AY518901 VRL AY518901 AY518902 VRL AY518902 AY518903 VRL AY518903 AY518904 VRL AY518904 AY518905 VRL AY518905 AY518906 VRL AY518906 AY518907 VRL AY518907 AY518908 VRL AY518908 AY518909 VRL AY518909 AY518910 VRL AY518910 AY518911 VRL AY518911 AY518912 VRL AY518912 AY518913 VRL AY518913 AY518914 VRL AY518914 AY518915 VRL AY518915 AY518916 VRL AY518916 AY518917 VRL AY518917 AY518918 VRL AY518918 AY518919 VRL AY518919 AY518920 VRL AY518920 AY518921 VRL AY518921 AY518922 VRL AY518922 AY518923 VRL AY518923 AY518924 VRL AY518924 AY518925 VRL AY518925 AY518926 VRL AY518926 AY518927 VRL AY518927 AY518928 VRL AY518928 AY518929 VRL AY518929 AY518930 VRL AY518930 AY518931 VRL AY518931 AY518932 VRL AY518932 AY521234 VRL AY521234 AY521235 VRL AY521235 AY521236 VRL AY521236 AY521237 VRL AY521237 AY521238 VRL AY521238 (ER) ARTERIOSCLER. THROMB. VASC. BIOL. (2004) IN PRESS AY563557 HUM AY563557 (ER) BIOCHEM. BIOPHYS. RES. COMMUN. 325 (1), 203-214 (2004) AY563137 HUM AY563137 (ER) BIOCHEM. J./10.1042/BJ20030293 HSA496460 HUM AJ496460 ------------------------------------------------------------------------------ 7.5. Part of the contents in the gene name index file 'ddbjgen.idx' This file lists all the gene names that appear in the feature table. ------------------------------------------------------------------------------ 'ARR BX927156 BCT BX927156 'BGLG BX927156 BCT BX927156 'BGLS BX927148 BCT BX927148 'BGLY' BX927156 BCT BX927156 'BRNQ AF305888 BCT AF305888 'COMK AL591983 BCT AL591983 AL596172 BCT AL596172 'CRCB BX927155 BCT BX927155 'CRTI BX927155 BCT BX927155 'DPPE LDDIPEP BCT Z34898 'FIC BX936398 BCT BX936398 ------------------------------------------------------------------------------ 8. Release history Release Date Entries Bases Comments 84 12/10 128,607,782 120,919,931,265 83 09/10 124,079,491 117,728,717,442 82 06/10 120,034,097 115,169,689,543 81 03/10 116,720,237 112,394,932,676 TPA excluded 80 12/09 112,314,250 109,636,862,252 SOURCE line modified 79 09/09 108,593,519 106,684,379,504 DBLINK line started PROJECT line terminated 78 06/09 105,737,359 104,597,360,291 77 03/09 102,099,156 101,765,388,414 76 12/08 98,220,409 98,741,908,446 75 09/08 92,840,037 95,219,505,205 TSA division started 74 06/08 87,903,140 91,294,770,939 73 03/08 83,167,582 86,099,950,395 KIPO inclusion started 72 12/07 79,004,098 82,592,245,487 Most of E-mail addresses discarded 71 09/07 76,273,345 79,706,204,461 70 06/07 72,801,679 76,788,510,646 69 03/07 67,523,680 71,775,679,500 PROJECT line started Indexes for categories terminated 68 12/06 64,267,978 68,259,314,742 1.5 GB storage started 67 09/06 61,144,621 65,443,024,193 66 06/06 58,176,628 62,945,843,881 65 03/06 55,890,995 60,564,721,635 TPA subcategories started 64 12/05 52,272,669 56,098,558,378 Some index files split 63 09/05 47,741,593 52,246,110,341 62 06/05 45,249,444 49,158,155,283 ENV division started Version for release note started 61 03/05 43,118,204 47,099,081,750 Changed style of release note 60 12/04 40,583,945 44,416,752,273 /db_xref="H-inv:**" started 59 09/04 37,926,117 42,245,956,937 58 06/04 34,917,581 39,812,635,108 57 03/04 32,693,678 38,008,449,840 56 12/03 30,405,173 36,079,046,032 55 09/03 27,753,140 34,280,225,489 54 06/03 25,149,821 32,162,041,177 53 02/03 23,250,813 29,711,299,332 52 12/02 20,354,812 26,931,456,316 51 09/02 18,401,358 22,782,404,136 TPA started 50 06/02 17,260,693 20,158,357,982 49 04/02 16,503,157 18,579,627,226 48 01/02 15,016,100 16,197,713,855 47 10/01 13,266,610 14,145,671,645 46 07/01 12,313,759 13,037,646,166 45 04/01 11,434,113 12,207,092,905 HTC division started 44 01/01 10,165,597 11,136,298,841 43 10/00 8,666,551 10,034,532,698 42 07/00 7,554,995 8,880,721,093 41 04/00 5,962,608 6,409,581,885 CON division started 40 01/00 5,388,125 4,762,696,173 RNA division terminated 39 10/99 4,810,773 3,728,000,562 NID and PID discarded 38 07/99 4,294,369 3,098,519,597 37 03/99 3,311,627 2,375,261,951 VERSION, /protein_id started 36 01/99 3,073,166 2,190,425,560 35 10/98 2,759,261 1,957,341,169 34 07/98 2,412,785 1,708,580,623 33 04/98 2,174,769 1,479,303,279 32 01/98 1,956,669 1,300,950,613 31 10/97 1,731,532 1,139,869,464 Adoption of the unified taxonomy database 30 07/97 1,534,115 992,788,339 NID and PID terminated 29 04/97 1,270,194 841,415,232 28 01/97 1,154,120 756,785,219 HTG division started ORG division terminated 27 10/96 936,697 608,103,057 GSS division started 26 07/96 835,552 551,932,448 25 04/96 744,490 499,300,364 /translation started 24 01/96 637,508 431,771,652 23 10/95 569,757 390,694,350 22 07/95 437,588 322,982,425 HUM division started 21 04/95 274,596 250,875,023 20 01/95 239,689 231,299,557 19 10/94 204,332 205,274,131 18 07/94 185,230 192,473,021 17 04/94 169,957 179,942,209 16 01/94 154,626 165,017,628 15 10/93 131,649 147,224,690 14 07/93 120,350 138,686,333 JPO inclusion started 13 04/93 112,067 129,784,445 12 01/93 97,683 120,815,244 EST division started 11 07/92 65,693 84,839,075 10 01/92 59,317 77,805,556 GenBank/EMBL inclusion started 9 07/91 1,130 2,002,124 8 01/91 879 1,573,442 7 07/90 681 1,154,211 6 01/90 496 841,236 5 07/89 395 679,378 4 01/89 302 535,985 3 07/88 230 345,850 2 01/88 142 199,392 1 07/87 66 108,970 Started with DDBJ only ------------------ Since release 81 ------------------ TPA category data have been excluded from DDBJ periodical release: Since September 2002 (DDBJ release 51), we provided DDBJ periodical releases including TPA category data. However, it is potentially confusing, because TPA category is not primary nucleotide sequence data. Therefore, DDBJ terminated to include TPA data. TPA data has been available from the other FTP site. See following site in detail. URL; http://www.ddbj.nig.ac.jp/whatsnew/whatsnew2009-e.html#090828 ------------------ Since release 80 ------------------ The format of the SOURCE line in DDBJ flat file has been changed: The SOURCE lines in some of DDBJ flat file included a common name like as GenBank flat file. The change is shown below ---------------- Old (-rel. 79) ---------------- Format: SOURCE [] Example: SOURCE Homo sapiens mitochondrion ---------------- New (rel. 80-) ---------------- Format: SOURCE [] [()] Example: SOURCE mitochondrion Homo sapiens (human) See also '2. DDBJ flat file format'. ------------------ Since release 79 ------------------ A new line, DBLINK, has replaced PROJECT line: Following the agreement at the INSD collaborative meeting in 2008, the scope of the project ID has expanded to include projects that are not necessarily targeted to the sequencing of a complete genome. In addition, there are other resources such as the Trace Assembly Archive at the NCBI and the like. Therefore, we have decided to replace the PROJECT line by a new line format, "DBLINK". The replacement is illustrated in the following; From the use of the PROJECT line (-release 78); ------------------------------------------------------------------------------- LOCUS AP000000 4700000 bp DNA circular BCT 27-FEB-2009 DEFINITION Escherichia coli DDBJ genomic DNA, complete genome. ACCESSION AP000000 VERSION AP000000.1 PROJECT GenomeProject:99999 KEYWORDS . ------------------------------------------------------------------------------- To the DBLINK line format (release 79-); ------------------------------------------------------------------------------- LOCUS AP000000 4700000 bp DNA circular BCT 27-FEB-2009 DEFINITION Escherichia coli DDBJ genomic DNA, complete genome. ACCESSION AP000000 VERSION AP000000.1 DBLINK Project:99999 KEYWORDS . ------------------------------------------------------------------------------- ------------------ Since release 75 ------------------ A new division for assembled mRNA sequences, Transcriptome Shotgun Assembly (TSA), has been included since the release 75. With new sequencing technologies in use, INSDC have faced many requests to accept assembled EST sequences. These sequence data have become more useful than used to be, although they may not be correctly assembled or exist in nature. Therefore, INSDC decided to collect assembled EST sequences and classified them into the new division 'TSA'. TSA sequences are shotgun assemblies of primary sequences deposited in the EST division of INSDC, race Archive (TA) or Short-Read Archive (SRA). Two specific keywords, "TSA" and "Transcriptome Shotgun Assembly", are present in all TSA entries. The new division code, "TSA", is also described in the the LOCUS line in all TSA entries. No format changes in the flat file are anticipated for the TSA division, however, note that TSA entries make use of the same PRIMARY line that is described for the entries in TPA category. The PRIMARY block contains references to the underlying reads/transcripts that are assembled to construct a TSA record. Note that it is required for a TSA submission to submit sequence data of primary transcripts to the EST division of INSDC, TA, or SRA. More information about how to submit a TSA entry is provided via the following URL; http://www.ddbj.nig.ac.jp/sub/tsa-e.html ------------------ Since release 73 ------------------ Introduction of the sequence data from the Korean Intellectual Property Office: The nucleotide sequence data transferred from Korean Intellectual Property Office (KIPO) have been included in DDBJ release. See also, '3. Division categories' and '3.1. Notice for patent related sequence data'. ------------------ Since release 72 ------------------ Deletion of E-mail address, phone and fax numbers from DDBJ flat file: To follow the Japanese law of protecting personal information, DDBJ deleted both phone and fax numbers, and E-mail address from the flat files of the entries submitted to DDBJ. It would be also helpful to protect DDBJ releases against SPAM mail senders. DDBJ retrofitted most of all entries submitted to DDBJ, not to GenBank or EMBL, by the DDBJ periodical release 72. Previously, the submitter information was described in JOURNAL line at REFERENCE 1 as, -------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Taro Mishima, DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan (E-mail:ddbj@ddbj.nig.ac.jp, URL:http://www.ddbj.nig.ac.jp/, Tel:81-12-345-6789, Fax:81-12-345-9876) -------------------------------------------------------------------------------- After the deletion or the information in question, DDBJ flat file is either one of the following two types; Type 1: Phone and fax numbers and E-mail address are deleted. -------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Contact:Taro Mishima DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan URL :http://www.ddbj.nig.ac.jp/ ------------------------------------------------------------------------------- Type 2: When the submitters wish to keep their contact information disclosed, it is described as, ------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Contact:Taro Mishima DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan URL :http://www.ddbj.nig.ac.jp/ E-mail :ddbj@ddbj.nig.ac.jp Phone :81-12-345-6789 Fax :81-12-345-9876 ------------------------------------------------------------------------------- ------------------ Since release 69 ------------------ Introduction of the project ID at PROJECT line in DDBJ flat file: Following the agreement at the INSD collaborative meeting in 2006, INSDC has started to assign the project ID for submissions from sequencing projects. The description of project ID is shown as below; ---------------------------------------------------------------------------- A unique identifier, assigned at the time of the submission by a sequencing project that informed INSDC of the submission beforehand. It is recommended that the submitter quotes the assigned project ID in all communication with INSDC databases to allow for easier and faster tracking of issues. The project ID field provides an umbrella identifier that points to all related sequence data for the project. ---------------------------------------------------------------------------- The PROJECT lines contain INSDC-assigned ID for the sequencing project. It will be appeared between VERSION and KEYWORDS lines in DDBJ flat files, from the DDBJ periodical release, 69 as shown below. See also '2. DDBJ flat file format'. ---------------------------------------------------------------------------- ACCESSION AB012345 VERSION AB012345.1 PROJECT GenomeProject:123 KEYWORDS . ---------------------------------------------------------------------------- Termination of providing the index files for each category: ------------------ Since release 68 ------------------ Split of files: We changed the maximum file size from 300 MB to 1.5 GB, because the network capacity has been remarkably increased. Each file named as ddbj***##.seq has at most 1.5 GB storage capacity. See also the sections, '6. File categories' and '9. File list'. ------------------ Since release 64 ------------------ Split of index files: In the present release, some of index files (ddbjacc.idx, ddbjjou.idx, and ddbjkey.idx) have been greater than 2 GB in the file size. So, these have been recorded in multiple ddbj****.idx files, each of which at most has 1.5 GB storage capacity as follows, respectively. See also 6., 7.2., 7.3., 7.4. and 9. ------------------ Since release 62 ------------------ Release version number is introduced: DDBJ has started to include the item, 'version', for its release note, which indicates a version for its periodical release. It is expressed like '62.0', in which the digit(s) after the period is a version number. The reason for adding the version number is that a released data is sometimes revised due to urgent and necessary corrections. The number is increased by one every time when a revised periodical release is made public until the next release. Introduction of ENV division: Recently, the submissions of the sequences derived from environmental samples have rapidly increased. To accommodate such submissions, a new division, ENV, has been created (See also '3.1. Division categories'). This division contains the sequences obtained via direct molecular isolation such as PCR, DGGE, or any anonymous method. In the past, the sequences derived from environmental samples belonged to taxonomic divisions, mainly BCT. At DDBJ, the retrofit to transfer relevant entries from taxonomic divisions to the ENV division starts in the present release, and ends by the next periodical release. Please note that during this transitional period, some entries to be eventually placed in the ENV division will be found in other divisions. Strand information is removed: The strand information of LOCUS line in the flat file has been removed as shown below. See also '2.1. LOCUS line'. ---------------------------------------------------------------------------- Old (-rel. 61): 44-44 space 45-47 spaces, ss- (single-stranded), ds- (double-stranded), or ms- (mixed-stranded) New (rel. 62-): 44-47 spaces ---------------------------------------------------------------------------- ------------------ Since release 61 ------------------ The style of release note (this file) has been changed. Some entries have the sequential format for the secondary accession numbers in the ACCESSION line, in order to make the expression of secondary accession numbers in the past short. For example; ------------------------------------------------------------------------------ Before; ACCESSION AB000802 D85885 D85886 D85887 After; ACCESSION AB000802 D85885-D85887 ------------------------------------------------------------------------------ See also '2.3. ACCESSION line'. ------------------ Since release 60 ------------------ The cross-reference to the H-invitational has been included. ------------------ Since release 56 ------------------ The three data banks have agreed that the maximum length limitation (350 kb) of a submitted sequence be relaxed. The BASE COUNT line of the DDBJ flat file format has been changed, corresponding to the relaxation of the maximum sequence length restriction in the entry that had been practiced at DDBJ/EMBL/GenBank International Nucleotide Sequence Databases. In the BASE COUNT line of the DDBJ flat file, 6 digits had been allocated for each number of a, c, g, t and other bases in the sequence. Hereafter, in the new flat file format, 9 digits are allocated for each number of a, c, g and t, while the numbers of other bases are removed. In accordance with the relaxation of sequence length limitation, GenBank had already dropped the BASE COUNT line from their flat file format from GenBank Release 138 (Oct. 2003). We DDBJ have decided to maintain the BASE COUNT line in our flat file format from the view that GC contents are still important information to characterize the sequence. The changes in the BASE COUNT line are shown below. ---------------------------------------------------------------------------- Old (-rel. 55): 1 6 11 16 21 26 31 36 41 46 51 56 61 66 71 |----|----|----|----|----|----|----|----|----|----|----|----|----|----| BASE COUNT 123456 a 123456 c 123456 g 123456 t 123456 others New (rel. 56-): 1 6 11 16 21 26 31 36 41 46 51 56 61 66 71 |----|----|----|----|----|----|----|----|----|----|----|----|----|----| BASE COUNT 123456789 a 123456789 c 123456789 g 123456789 t ---------------------------------------------------------------------------- ------------------ Since release 54 ------------------ '/sequenced_mol' qualifier has been changed to '/mol_type' qualifier. We accordingly completed retrofitting the pertinent entries. This change was made on the agreement at the INSD collaborative meeting in 2002. ------------------ Since release 51 ------------------ The format of LOCUS line in the flat file has been changed as shown below to adjust to the GenBank format. ------------------------------------------------------------------------------ Old (-rel. 50): LOCUS AB000001 660 bp DNA PLN 01-FEB-2001 New (rel. 51-): LOCUS AB000001 660 bp DNA linear PLN 01-FEB-2001 ------------------------------------------------------------------------------ ------------------ Since release 45 ------------------ The HTC (High Throughput cDNA) division has been included. This is to include unfinished high throughput cDNA sequences, each of which has 5'UTR and 3'UTR at both ends and part of a coding region. The sequence may also include introns. When the sequence becomes finished later, it moves to the corresponding taxonomic division. The sequence is accompanied with a keyword, HTC (High Throughput cDNA), which is dropped when the sequence is finished and moved to a taxonomic division. ------------------ Since release 41 ------------------ The CON division has been included. This division is to show the order of related sequences in a genome, and expressed by join and the accession numbers of the sequences. The contents of the CON division are compiled by the three data banks not by the data submitter. ------------------ Since release 40 ------------------ The RNA division was terminated. ------------------ Since release 37 ------------------ The three data banks include the item VERSION in the flat file, which indicates a version of a submitted nucleotide sequence. It is expressed like AB123456.1, in which the digit(s) after the period is a version number. The reason for adding VERSION is that since a released sequence sometimes revised by the submitter, the accession number alone cannot specify the sequence in question causing the user a trouble. The number is increased by one every time when a revised sequence is made public. Accordingly, the translated protein sequence will be accompanied with a /protein_id which is expressed as BAA12345.1, in which the digit(s) after the period is again a version number. The number is increased by one when the corresponding nucleotide sequence is revised and the protein sequence is changed as a result, and when the revised protein sequence is made public. ------------------ Since release 31 ------------------ We have started adopting the unified taxonomy database to unify the biological source of the sequence. The database is made up with scientific names, ID of unidentified organisms, and synthetic constructs etc. ------------------ Since release 30 ------------------ NID and PID were terminated. This change was made on the agreement at the INSD collaborative meeting in 1999. ------------------ Since release 28 ------------------ The HTG (High Throughput Genomic sequence) has been included. We terminated the ORG (Organelle) division. ------------------ Since release 27 ------------------ The GSS division has been included. GSS stands for Genome Survey Sequence, which is similar to EST, except that GSS is genomic DNA whereas EST is cDNA. ------------------ Since release 25 ------------------ DDBJ release contains amino acid sequences that were translated from the corresponding nucleotide sequences of the database. ------------------ Since release 22 ------------------ The HUM division has been included. We have the human (HUM) division solely for human sequences and the primate (PRI) division for non-human primate sequences. ------------------ Since release 12 ------------------ The EST (Expressed Sequence Tag) division has been included. ------------------ Since release 10 ------------------ The sequences submitted to GenBank or EMBL have been included in the release. 9. File list The files in this release are arranged in the following order with non-labeled format. ----------------------------------------------------------------------- file name file size ----------------------------------------------------------------------- ddbjrel.txt (DDBJ release note) 74684 ddbjacc1.idx (Accession number index file 1) 1499999996 ddbjacc2.idx (Accession number index file 2) 1500000025 ddbjacc3.idx (Accession number index file 3) 1500000032 ddbjacc4.idx (Accession number index file 4) 517780527 ddbjgen.idx (Gene name index file) 203856388 ddbjjou1.idx (Journal citation index file 1) 1499999852 ddbjjou2.idx (Journal citation index file 2) 1475128090 ddbjjou3.idx (Journal citation index file 3) 1476937605 ddbjjou4.idx (Journal citation index file 4) 1082894912 ddbjkey1.idx (Keyword phrase index file 1) 1499999975 ddbjkey2.idx (Keyword phrase index file 2) 1499999980 ddbjkey3.idx (Keyword phrase index file 3) 1499999989 ddbjkey4.idx (Keyword phrase index file 4) 495337149 ----------------------------------------------------------------------- file name number of entries number of bases file size ----------------------------------------------------------------------- ddbjbct1.seq 131790 609000079 1499001767 ddbjbct2.seq 95940 658148732 1515109991 ddbjbct3.seq 496 675114051 1513833551 ddbjbct4.seq 342 662064583 1502706055 ddbjbct5.seq 390 665466129 1501338045 ddbjbct6.seq 527 662213863 1510550682 ddbjbct7.seq 392 658623184 1505012461 ddbjbct8.seq 255569 535706606 1510930543 ddbjbct9.seq 175205 533418911 1319239826 ddbjenv1.seq 567549 412293014 1499000460 ddbjenv2.seq 565631 403091128 1499002279 ddbjenv3.seq 502100 444961361 1499000181 ddbjenv4.seq 708071 267592298 1499000667 ddbjenv5.seq 583383 410088481 1499000468 ddbjenv6.seq 8357 3040727 17848285 ddbjest1.seq 461161 172543195 1499001620 ddbjest2.seq 488834 191334814 1499002623 ddbjest3.seq 496918 205455425 1499001768 ddbjest4.seq 478780 204156006 1499002319 ddbjest5.seq 546359 290295757 1499001906 ddbjest6.seq 550595 337405607 1498999922 ddbjest7.seq 538734 307385395 1499001867 ddbjest8.seq 404238 131048209 1499002213 ddbjest9.seq 487041 208545408 1499001887 ddbjest10.seq 510072 236181629 1499002047 ddbjest11.seq 470074 200802626 1499001715 ddbjest12.seq 372588 132864655 1499001760 ddbjest13.seq 274333 83757095 1499000609 ddbjest14.seq 274453 108111681 1499001758 ddbjest15.seq 379871 176791854 1499003624 ddbjest16.seq 480477 247140692 1499001182 ddbjest17.seq 463501 244800163 1499001047 ddbjest18.seq 452462 248575631 1499003397 ddbjest19.seq 463617 222253422 1499000424 ddbjest20.seq 463379 279705753 1499000704 ddbjest21.seq 468426 286519414 1499000981 ddbjest22.seq 467958 244519654 1499000860 ddbjest23.seq 446929 262920114 1499000922 ddbjest24.seq 504897 278307791 1499001617 ddbjest25.seq 548154 319478099 1499001537 ddbjest26.seq 415399 210159362 1499003344 ddbjest27.seq 433677 254993529 1499002826 ddbjest28.seq 479153 271753833 1499002501 ddbjest29.seq 515361 262365426 1499001791 ddbjest30.seq 451414 242187176 1499000180 ddbjest31.seq 457114 253462807 1499000051 ddbjest32.seq 441763 288539291 1499000368 ddbjest33.seq 409260 292634290 1499002879 ddbjest34.seq 498054 296579976 1499000736 ddbjest35.seq 638308 367524082 1499002579 ddbjest36.seq 471154 299618868 1498999971 ddbjest37.seq 417515 245122171 1499003395 ddbjest38.seq 258191 96931469 1499005434 ddbjest39.seq 258898 104817879 1499003515 ddbjest40.seq 313820 150379822 1499001456 ddbjest41.seq 474660 269396706 1499001591 ddbjest42.seq 479788 266076106 1499000466 ddbjest43.seq 445150 239456023 1499001643 ddbjest44.seq 474265 281008099 1499001378 ddbjest45.seq 518203 259100725 1499000257 ddbjest46.seq 432489 256640446 1499001113 ddbjest47.seq 555950 283413961 1499002312 ddbjest48.seq 429311 246009152 1499003387 ddbjest49.seq 402269 236025680 1499001345 ddbjest50.seq 262855 134081897 1499002865 ddbjest51.seq 267906 109392060 1499005186 ddbjest52.seq 309112 136595664 1499000155 ddbjest53.seq 413684 229732858 1499000127 ddbjest54.seq 558241 318281699 1499001807 ddbjest55.seq 427162 286291642 1499000437 ddbjest56.seq 444735 244820190 1499000083 ddbjest57.seq 474893 279939596 1499002887 ddbjest58.seq 429144 234251183 1499001866 ddbjest59.seq 480411 269515155 1499002145 ddbjest60.seq 448478 275291389 1499001297 ddbjest61.seq 421487 241671560 1499000982 ddbjest62.seq 491730 333610368 1499001995 ddbjest63.seq 446791 273636492 1499000623 ddbjest64.seq 447565 224523846 1499000582 ddbjest65.seq 434428 268477638 1499001510 ddbjest66.seq 434837 281006994 1499002002 ddbjest67.seq 395135 256369979 1499000233 ddbjest68.seq 430251 239307712 1499002871 ddbjest69.seq 424855 236455548 1499000459 ddbjest70.seq 428355 237589484 1499000309 ddbjest71.seq 427310 226163639 1499002746 ddbjest72.seq 507292 295176938 1499002111 ddbjest73.seq 542396 331613403 1499001790 ddbjest74.seq 569870 340038106 1499000620 ddbjest75.seq 466513 308166684 1499001008 ddbjest76.seq 471612 282804448 1499001515 ddbjest77.seq 412719 304822703 1499002057 ddbjest78.seq 484332 296404472 1499000560 ddbjest79.seq 380126 271118566 1499003519 ddbjest80.seq 395730 269876029 1499001465 ddbjest81.seq 381512 252802889 1498999964 ddbjest82.seq 407798 332955860 1499003414 ddbjest83.seq 462176 288361372 1499000941 ddbjest84.seq 465964 326305752 1499001537 ddbjest85.seq 540843 293998931 1499003569 ddbjest86.seq 545070 199158367 1499002293 ddbjest87.seq 496758 308940766 1499000832 ddbjest88.seq 492044 324404276 1499001660 ddbjest89.seq 504759 305288250 1499002214 ddbjest90.seq 671884 325489809 1499001266 ddbjest91.seq 593007 252155010 1499002548 ddbjest92.seq 457528 298104330 1499000831 ddbjest93.seq 534054 315856944 1499000593 ddbjest94.seq 553650 177942641 1499001576 ddbjest95.seq 508103 321561666 1499002023 ddbjest96.seq 474608 265741672 1499004774 ddbjest97.seq 474346 223038618 1499000908 ddbjest98.seq 599938 194968143 1499000807 ddbjest99.seq 506351 260252255 1499000125 ddbjest100.seq 561641 268598347 1499001636 ddbjest101.seq 493736 298333774 1499000542 ddbjest102.seq 497783 303942188 1499000574 ddbjest103.seq 549295 254782659 1499001953 ddbjest104.seq 568201 234520210 1499001361 ddbjest105.seq 475628 300051146 1499001653 ddbjest106.seq 415950 281907305 1499001811 ddbjest107.seq 472522 282364352 1499003038 ddbjest108.seq 453117 306313418 1499001081 ddbjest109.seq 471744 341190871 1499001798 ddbjest110.seq 403328 275676740 1499001540 ddbjest111.seq 434184 294909689 1499000184 ddbjest112.seq 453438 256823832 1499001951 ddbjest113.seq 438454 285890379 1499001324 ddbjest114.seq 481529 278986073 1499002070 ddbjest115.seq 365623 227628271 1499002824 ddbjest116.seq 477448 243761359 1499002224 ddbjest117.seq 484236 271562368 1499001080 ddbjest118.seq 398017 254324214 1499001297 ddbjest119.seq 482956 290910412 1499001132 ddbjest120.seq 390784 258454263 1499001340 ddbjest121.seq 364650 210433822 1499002849 ddbjest122.seq 454465 112312578 1499000652 ddbjest123.seq 658784 337639004 1499001934 ddbjest124.seq 446915 270140649 1499001425 ddbjest125.seq 524251 275046473 1499000903 ddbjest126.seq 541254 277658276 1499004798 ddbjest127.seq 519819 337634224 1499000228 ddbjest128.seq 528922 323992655 1499001994 ddbjest129.seq 548076 328155229 1499000833 ddbjest130.seq 500189 178956108 1499001269 ddbjest131.seq 451631 71569049 1499002992 ddbjest132.seq 460178 201131625 1499000744 ddbjest133.seq 475838 311215019 1499001376 ddbjest134.seq 414608 280245541 1499002175 ddbjest135.seq 480485 289065499 1499001196 ddbjest136.seq 464879 211424725 1499000097 ddbjest137.seq 471640 283376513 1499001036 ddbjest138.seq 438145 297995644 1499003478 ddbjest139.seq 461439 269656796 1499001430 ddbjest140.seq 477716 285684900 1499000639 ddbjest141.seq 320198 213918467 1499005904 ddbjest142.seq 373713 226399251 1499002698 ddbjest143.seq 427504 258306349 1499001505 ddbjest144.seq 493419 291116016 1499001964 ddbjest145.seq 496336 277317450 1499003357 ddbjest146.seq 429478 157961925 1363570105 ddbjgss1.seq 478655 345596411 1499003000 ddbjgss2.seq 445953 341915651 1499001919 ddbjgss3.seq 441912 333895046 1499004034 ddbjgss4.seq 565891 274044751 1499001928 ddbjgss5.seq 489540 254358738 1499001276 ddbjgss6.seq 466474 255949123 1499001479 ddbjgss7.seq 391808 194344962 1499001301 ddbjgss8.seq 418343 210701962 1499002870 ddbjgss9.seq 498369 289732708 1499001267 ddbjgss10.seq 556938 310988815 1499000591 ddbjgss11.seq 492177 292954686 1499001046 ddbjgss12.seq 538066 350311720 1499001572 ddbjgss13.seq 518512 361557188 1499000313 ddbjgss14.seq 514945 356333435 1499000531 ddbjgss15.seq 604578 340238052 1499002185 ddbjgss16.seq 606483 368410843 1499002576 ddbjgss17.seq 563371 320891257 1499000504 ddbjgss18.seq 522914 372834366 1499001523 ddbjgss19.seq 511376 338815058 1499001569 ddbjgss20.seq 576509 368102123 1499001365 ddbjgss21.seq 578462 412788241 1499002320 ddbjgss22.seq 537729 323399279 1499001199 ddbjgss23.seq 480704 284989730 1499001712 ddbjgss24.seq 517979 338589253 1498999955 ddbjgss25.seq 530828 340103314 1498999962 ddbjgss26.seq 537064 351561883 1499001591 ddbjgss27.seq 591675 291827733 1499001281 ddbjgss28.seq 577687 288360308 1499000174 ddbjgss29.seq 555357 321415490 1499000696 ddbjgss30.seq 464052 384259167 1499002868 ddbjgss31.seq 475423 345660195 1499003017 ddbjgss32.seq 527132 372765628 1499001619 ddbjgss33.seq 598035 344714328 1499000340 ddbjgss34.seq 448017 332936299 1499002026 ddbjgss35.seq 524549 359009179 1499001170 ddbjgss36.seq 512279 243390841 1499001680 ddbjgss37.seq 574064 299731526 1499002591 ddbjgss38.seq 420660 307464240 1499001771 ddbjgss39.seq 409695 336745142 1499000236 ddbjgss40.seq 423829 347417677 1499002832 ddbjgss41.seq 415079 330766032 1499000621 ddbjgss42.seq 423436 345343337 1499003073 ddbjgss43.seq 421333 347712891 1499001655 ddbjgss44.seq 411781 331287836 1499003337 ddbjgss45.seq 518094 344070472 1499000314 ddbjgss46.seq 538391 341699673 1499000322 ddbjgss47.seq 596874 401340536 1499001118 ddbjgss48.seq 587735 413144129 1499002189 ddbjgss49.seq 477084 327782140 1499001079 ddbjgss50.seq 506365 302168684 1499000708 ddbjgss51.seq 530398 336184818 1499000625 ddbjgss52.seq 518627 388871880 1499001423 ddbjgss53.seq 553662 426655624 1498999947 ddbjgss54.seq 544414 369258984 1499003377 ddbjgss55.seq 536828 327990848 1499001511 ddbjgss56.seq 513025 358068610 1499000784 ddbjgss57.seq 492448 442884170 1499001171 ddbjgss58.seq 505038 433245504 1499001714 ddbjgss59.seq 165428 146294255 487656669 ddbjhtc1.seq 273979 358297388 1499001746 ddbjhtc2.seq 294060 302469082 1078886159 ddbjhtg1.seq 11401 1118110528 1499022921 ddbjhtg2.seq 7563 1118342964 1499135250 ddbjhtg3.seq 5905 1130687868 1499149856 ddbjhtg4.seq 5463 1140183805 1499053297 ddbjhtg5.seq 5341 1144080026 1499177461 ddbjhtg6.seq 5357 1144117237 1499164385 ddbjhtg7.seq 6591 1132560094 1499109186 ddbjhtg8.seq 6850 1143042549 1499127633 ddbjhtg9.seq 6265 1139335912 1499042383 ddbjhtg10.seq 6338 1133331724 1499211508 ddbjhtg11.seq 7032 1123352042 1499191083 ddbjhtg12.seq 7004 1125429879 1499025574 ddbjhtg13.seq 6942 1141395147 1499097178 ddbjhtg14.seq 6969 1135029100 1499073278 ddbjhtg15.seq 6762 1141068386 1499004027 ddbjhtg16.seq 6301 1138826470 1499323140 ddbjhtg17.seq 6654 1139690154 1499016896 ddbjhtg18.seq 8017 1145104894 1499143562 ddbjhtg19.seq 6524 1130250252 1502808179 ddbjhtg20.seq 6607 1159103145 1499096937 ddbjhtg21.seq 6509 1159338008 1499118709 ddbjhtg22.seq 2715 436188314 567630776 ddbjhum1.seq 31402 1044352837 1499125884 ddbjhum2.seq 8099 1069329078 1499132421 ddbjhum3.seq 146205 825806386 1499050481 ddbjhum4.seq 22246 1071955078 1499059477 ddbjhum5.seq 231069 586064086 1499001619 ddbjhum6.seq 88222 148954203 384066382 ddbjinv1.seq 244622 688561722 1499406203 ddbjinv2.seq 421671 459165269 1499000954 ddbjinv3.seq 272809 623761864 1499002435 ddbjinv4.seq 337979 322957017 1280270287 ddbjmam.seq 248889 704659167 1443600930 ddbjpat1.seq 1034540 519788889 1499000074 ddbjpat2.seq 772975 492171094 1499000627 ddbjpat3.seq 719480 345424597 1499000325 ddbjpat4.seq 714257 585668581 1499000840 ddbjpat5.seq 717956 403684360 1499001234 ddbjpat6.seq 733701 312717035 1499001970 ddbjpat7.seq 676573 371377744 1499001229 ddbjpat8.seq 711473 527096488 1499000386 ddbjpat9.seq 928882 529138514 1499000018 ddbjpat10.seq 627855 477944124 1499001844 ddbjpat11.seq 669670 349234173 1498999970 ddbjpat12.seq 500139 619507511 1499324305 ddbjpat13.seq 671359 315600100 1499000896 ddbjpat14.seq 907933 508076703 1499007490 ddbjpat15.seq 1001901 402677994 1499001548 ddbjpat16.seq 849973 582047562 1499000433 ddbjpat17.seq 1416043 337170131 1499000943 ddbjpat18.seq 1312681 190829072 1499969906 ddbjpat19.seq 687582 517110241 1499000096 ddbjpat20.seq 1144153 216406927 1499000513 ddbjpat21.seq 1196707 217269017 1499000638 ddbjpat22.seq 268773 155982475 457297910 ddbjphg.seq 5631 48751320 119496388 ddbjpln1.seq 96679 958154093 1499001723 ddbjpln2.seq 270367 523703375 1499005944 ddbjpln3.seq 78797 895549404 1499103248 ddbjpln4.seq 310022 590558671 1499000250 ddbjpln5.seq 414756 490886297 1499194603 ddbjpln6.seq 449772 462864432 1499000628 ddbjpln7.seq 252569 253138120 855070564 ddbjpri1.seq 41536 1090844390 1499002015 ddbjpri2.seq 42572 150774779 283554170 ddbjrod1.seq 36625 1015529974 1499021266 ddbjrod2.seq 5893 1092494599 1499101096 ddbjrod3.seq 28129 1073998051 1499002696 ddbjrod4.seq 90958 864958424 1499040254 ddbjrod5.seq 249965 285353744 806635515 ddbjsts1.seq 415836 209655041 1499000086 ddbjsts2.seq 337962 238127682 1499000930 ddbjsts3.seq 564785 186212123 1499001536 ddbjsts4.seq 1333 378082 2763018 ddbjsyn.seq 95428 147013037 517166381 ddbjtsa1.seq 666155 280474917 1499000736 ddbjtsa2.seq 649357 303760362 1499000847 ddbjtsa3.seq 95586 153398647 413051908 ddbjuna.seq 288 484315 1395932 ddbjvrl1.seq 384903 406960143 1499001493 ddbjvrl2.seq 367549 419629648 1499001211 ddbjvrl3.seq 163988 192098106 675681775 ddbjvrt1.seq 243955 688820350 1499011054 ddbjvrt2.seq 65853 992686470 1499001653 ddbjvrt3.seq 278519 699221296 1499002482 ddbjvrt4.seq 171719 188188330 612550241 ------------------------------------------------------------------------------ Total 128607782 120919931265 444474936330 ddbjcon1.seq 265241 0 1499002888 ddbjcon2.seq 240908 0 1499001281 ddbjcon3.seq 536022 0 1499000604 ddbjcon4.seq 405980 0 1499023388 ddbjcon5.seq 381570 0 1499138880 ddbjcon6.seq 309144 0 1499034974 ddbjcon7.seq 111727 0 1499112948 ddbjcon8.seq 306815 0 1499005364 ddbjcon9.seq 412850 0 1499002004 ddbjcon10.seq 312333 0 1499000149 ddbjcon11.seq 231647 0 1499005799 ddbjcon12.seq 225244 0 1499002702 ddbjcon13.seq 242557 0 1499001404 ddbjcon14.seq 268174 0 1499003216 ddbjcon15.seq 277309 0 1499004070 ddbjcon16.seq 321938 0 1499003361 ddbjcon17.seq 276867 0 1499003574 ddbjcon18.seq 278315 0 1499000884 ddbjcon19.seq 288888 0 1499001529 ddbjcon20.seq 269403 0 1499002720 ddbjcon21.seq 250115 0 1499000623 ddbjcon22.seq 43838 0 231066948 The entries and bases in the CON division are not counted in the numbers given on the top of the release note or 'Total' on the above table.