DNA Data Bank of Japan DNA Database Release 86.0, June 2011, including 138,030,308 entries, 128,745,918,079 bases Last published date in the present release: May 27, 2011 ------------------------------------------------------------------------------- Table of contents ------------------------------------------------------------------------------- 1. Introduction 1.1. Announcement for changes in the present release 1.2. Announcement for the forthcoming changes 2. DDBJ flat file format 2.1. LOCUS line 2.2. DEFINITION line 2.3. ACCESSION line 2.4. VERSION line 2.5. KEYWORDS line 2.6. SOURCE line 2.7. REFERENCE line 2.8. COMMENT line 2.9. FEATURES line 2.10. BASE COUNT line 2.11. ORIGIN line 3. Division categories 3.1. Notice for patent related sequence data 4. DDBJ staff 5. Acknowledgment 6. Disclaimer 7. File categories 8. Sample of the contents in each file 8.1. Part of the contents in the file 'ddbjbct1.seq' 8.2. Part of the contents in the accession number index file 'ddbjacc1.idx' 8.3. Part of the contents in the keyword phrase index file 'ddbjkey1.idx' 8.4. Part of the contents in the journal citation index file 'ddbjjou1.idx' 8.5. Part of the contents in the gene name index 'ddbjgen.idx' 9. Release history 10. File list ------------------------------------------------------------------------------- 1. Introduction The present release contains the newest data prepared by the DNA Data Bank of Japan (DDBJ), GenBank (*), and EMBL-Bank/European Bioinformatics Institute (EMBL-Bank/EBI) as of May 27, 2011. This unified database was made possible thanks to the international collaboration among the three data banks. All the entries have accordingly been annotated using the feature keys common to them. In 2005, DDBJ, EMBL-Bank and GenBank agreed to call their collaboration "the International Nucleotide Sequence Database Collaboration (INSDC); http://www.insdc.org " and to call the unified nucleotide sequence database "the International Nucleotide Sequence Database (INSD)". *'GenBank' is a trademark of NIH, USA, and is operated by National Center for Biotechnology Information (NCBI) at NIH. 1.1. Announcement for changes in the present release Nothing particular. 1.2. Announcement for the forthcoming changes Nothing particular. 2. DDBJ flat file format The database is a collection of "entry" which is the unit of the data. The entries submitted to databanks were processed and publicized according to the DDBJ format for distribution (flat file). The flat file includes the sequence and the information of submitters, references, source organisms, and "feature" information, etc. The items of the DDBJ flat file are explained at following; ------------------------------------------------------------------------------- LOCUS AB000000 450 bp mRNA linear HUM 08-JUL-2002 DEFINITION Homo sapiens GAPD mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds. ACCESSION AB000000 VERSION AB000000.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 450) AUTHORS Mishima,H. and Shizuoka,T. TITLE Direct Submission JOURNAL Submitted (30-NOV-2000) to the DDBJ/EMBL/GenBank databases. Contact:Hanako Mishima National Institute of Genetics, DNA Data Bank of Japan; 1111, Yata, Mishima, Shizuoka 411-8540, Japan REFERENCE 2 AUTHORS Mishima,H., Shizuoka,T. and Fuji,I. TITLE Glyceraldehyde-3-phosphate dehydrogenase expressed in human liver JOURNAL Unpublished (2002) COMMENT Human cDNA sequencing project. FEATURES Location/Qualifiers source 1..450 /chromosome="12" /clone="GT200015" /clone_lib="lambda gt11 human liver cDNA (GeneTech. No.20)" /map="12p13" /mol_type="mRNA" /organism="Homo sapiens" /tissue_type="liver" CDS 86..>450 /codon_start=1 /gene="GAPD" /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="BAA12345.1" /transl_table=1 /translation="MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMT YMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPKEIPWGETSAEFVVEYTG VFTDKDKAVAQLKGGAKKV" BASE COUNT 102 a 119 c 131 g 98 t ORIGIN 1 cccacgcgtc cggtcgcatc gcacttgtag ctctcgaccc ccgcatctca tccctcctct 61 cgcttagttc agatcgaaat cgcaaatggc gaagattaag atcgggatca atgggttcgg 121 gaggatcggg aggctcgtgg ccagggtggc cctgcagagc gacgacgtcg agctcgtcgc 181 cgtcaacgac cccttcatca ccaccgacta catgacatac atgttcaagt atgacactgt 241 gcacggccag tggaagcatc atgaggttaa ggtgaaggac tccaagaccc ttctcttcgg 301 tgagaaggag gtcaccgtgt tcggctgcag gaaccctaag gagatcccat ggggtgagac 361 tagcgctgag tttgttgtgg agtacactgg tgttttcact gacaaggaca aggccgttgc 421 tcaacttaag ggtggtgcta agaaggtctg // ------------------------------------------------------------------------------- 2.1. LOCUS line The format of LOCUS line in the flat file is shown below; --------- -------- Positions Contents --------- -------- 01-05 'LOCUS' 06-12 spaces 13-28 Locus name 29-29 space 30-40 Length of sequence, right-justified 41-41 space 42-43 'bp' 44-47 spaces 48-54 DNA, RNA, mRNA, rRNA, tRNA or cRNA, left justified 55-55 space 56-63 'linear' followed by two spaces, or 'circular' 64-64 space 65-67 The division code (see '3.1. Division categories') 68-68 space 69-79 Date, in the form dd-MMM-yyyy (e.g., 08-JUL-2002) ------------------------------------------------------------------------------ 2.2. DEFINITION line The definition briefly describes the information of gene(s). "DEFINITION" is constructed by each of the three data banks. 2.3. ACCESSION line This line shows accession number of the entry data. A unique accession number is issued to the data submitter by each of the three data banks. The accession number is composed of 1 alphabet character and 5 digits (ex. A12345) or 2 alphabet characters and 6 digits (ex. AB123456). The former style was used in 1980s, but later the latter style was introduced because of data explosion. All the entries designated by the accession numbers with the prefixes given below have been collected and processed by DDBJ, and the rest have been done by GenBank and EMBL-Bank/EBI. ------------------------------------------------------------------------------- C, D, E, AB, AG, AK, AP, AT, AU, AV, BA, BB, BD, BJ, BP, BS, BW, BY, CI, CJ, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, DL, DM, FS, FT, FU, FV, FW, FX, FY, FZ, GA ------------------------------------------------------------------------------- You can find the list of the prefixes of the accession numbers at the following URL; http://www.ddbj.nig.ac.jp/sub/prefix.html If multiple entries are united to an entry, or if an entry is extensively modified after the submission, the responsible data banks may assign a new accession number to it. In these cases, the new accession number is called the primary accession number, and the old accession number(s) is/are called the secondary accession number(s). In the flat file, the primary accession number is indicated first, then the secondary accession number(s) follows. You can find the same updated entry with both the primary and the secondary accession numbers. 2.4. VERSION line This line consists of an accession number and a version number, like "AB123456.1", in which the digit(s) after the period is a version number. The data open to public for the first time is version number as "1". The reason for adding VERSION is that since a released sequence sometimes revised by the submitter, the accession number alone cannot specify the sequence in question causing the user a trouble. The number is increased by one every time when a revised sequence is made public. 2.5. KEYWORDS line The data banks describe this line, if necessary. In many cases, the categories of the data (EST, HTG etc.), gene names and product names included in "KEYWORDS". 2.6. SOURCE line This line shows the scientific name (and a corresponding common name, if defined as "Genbank common name" in taxonomy database) on organism from which the sequence is obtained and an organelle type if the sequence is derived from an organelle other than the nucleus. 2.7. REFERENCE line The information on the submitters and references related to the submitted sequence is indicated in REFERENCE line. 2.8. COMMENT line. The information about an entry that cannot be described using FEATURES or the other fields. 2.9. FEATURES line Biological features of a submitted sequence data are described with "Feature" key (the biological nature of the annotated feature), "Location" (the region of the sequence which corresponds to Feature), and "Qualifier" (supplementary information about Feature). The "Feature" and "Qualifier" keys used in the present release is defined by DDBJ/EMBL/GenBank Feature Table: Definition Version 9.0 (Dec, 2010). The document is continuously updated every half year, in principle. You can find its newest version on URL; http://www.ddbj.nig.ac.jp/FT/full_index.html 2.10. BASE COUNT line In the BASE COUNT line of the DDBJ flat file, 9 digits are allocated for each number of a (adenine), c (cytosine), g(guanine) and t (thymine). In the case of RNA sequence, uracil is indicated as "t" according to the rule of the international nucleotide database. 2.11. ORIGIN line The sequence data starts from the next line of ORIGIN. The sequence is indicated as lower case letters, delimited by space per 10 bases, starts a new line by 60 bases. The numbers described at left side of lines mean the ordinal number of the top base of the line. 3. Division categories The present release is divided into 21 categories, called 'division', of organisms and others. The contents of the 21 divisions are shown in the following. See also '7. File categories' and '10. File list' below. HUM; human PRI; primates (other than human) ROD; rodents MAM; mammals (other than primates and rodents) VRT; vertebrates (other than mammals) INV; invertebrates (animals other than vertebrates) PLN; plants, fungi, plastids (eukaryotes other than animals) BCT; bacteria (including both Eubacteria and Archaea) VRL; viruses PHG; bacteriophages ENV; sequences obtained via environmental sampling methods SYN; synthetic constructs (artificially constructed sequences) EST; expressed sequence tags; short single pass cDNA sequences GSS; genome survey sequences; short single pass genomic sequences TSA; transcriptome shotgun assemblies HTC; high throughput cDNA sequences; The sequence submitted from cDNA sequencing projects except for EST. This division is to include unfinished high throughput cDNA sequences, each of which has 5'UTR and 3'UTR at both ends and part of a coding region. The sequence may also include introns. When the sequence becomes finished later, it moves to the corresponding taxonomic division. HTG; high throughput genomic sequences The sequence submitted mainly from genome sequencing projects which regarded a clone as a sequencing unit. STS; sequence tagged sites The tag site for genome sequencing. The information of chromosome, map, is mandatory for this division. PAT; sequence data related to patent applications The data those which the Japan Patent Office (JPO), United States Patent and Trademark Office (USPTO), the European Patent Office (EPO), and Korean Intellectual Property Office (KIPO) collected, processed and released. See also '3.1. Notice for patent related sequence data' below. UNA; the data not annotated The UNA division is not used for recently submitted sequences. CON; Contig / Constructed To conjugate a series of entries, such as those submitted from a genome project, each of the three data banks constructs an entry and assign an accession number to a large scale sequence dataset. Such entries are classified into the CON division. The entry in the CON division has the information of joined accession numbers instead of the sequence data. The corresponding entries of the CON entry have been submitted to other divisions. The entries and bases in the CON division are not counted in the released numbers given on the top of the release note. 3.1. Notice for patent related sequence data This release includes PAT division for patent related sequence data as described above. The data those which Japan Patent Office (JPO), United States Patent and Trademark Office (USPTO), European Patent Office (EPO), and Korean Intellectual Property Office (KIPO) collected, processed and released. Sequence data in patent claims to KIPO were properly processed and submitted to DDBJ by Byungwook Lee at Korean Bioinformation Center in collaboration with KIPO. The prefixes of accession numbers for the patent related sequence data are shown below; JPO : E, BD, DD, DJ, DL, DM, FU, FV, FW, FZ KIPO : DI USPTO: I, AR, DZ, EA, GC, GP, GV, GX, GY EPO : A, AX, CQ, CS, FB, GM, GN, HA, HB, HC, HD, HH, HI, JA Note also that unauthorized use of the patented data may cause legal issues for which DDBJ takes no responsibility. See also '6. Disclaimer'. 4. DDBJ staff This release is published by the following DDBJ staff. Jun Mashima, Hideo Aono, Yoshiyuki Ehara, Mayumi Ejima, Masato Endo, Masahiro Fujimoto, Daisuke Fukuda, Tatsukazu Hashimoto, Fumie Hirata, Nobuhiro Hoshi, Fumiyasu Ishikawa, Kazuya Kanno, Shingo Kawahara, Takahiro Kazama, Satoshi Kitadate, Yuichi Kodama, Junko Kohira, Takehide Kosuge, Fumiko Kubodera, Eisuke Kurihara, Kyungbum Lee, Mika Maki, Hisako Mashima, Kimiko Mimura, Mieko Mochizuki, Takeshi Moriyama, Yoshihisa Munakata, Naoko Murakata, Sachiko Nagira, Masahiko Nagura, Asami Nozaki, Toshihisa Okido, Katsunaga Sakai, Masakazu Sano, Makoto Sato, Yukie Shinyama, Naoki Shiraishi, Rie Sugita, Kimiko Suzuki, Kazuya Takei, Haru Tsutsui, Koji Watanabe, Hiroaki Yamada, Kenji Yamamoto, Emi Yokoyama, Takashi Gojobori, Eli Kaminuma, Osamu Ogasawara, Kosaku Okubo, Toshihisa Takagi and Yasukazu Nakamura Center for Information Biology and DNA Data Bank of Japan National Institute of Genetics Research Organization of Information and Systems Mishima 411-8540, Japan Phone: +81 55 981 6853 FAX: +81 55 981 6849 E-mail: ddbj@ddbj.nig.ac.jp (for general inquiry) ddbjsub@ddbj.nig.ac.jp (for data submission) ddbjupdt@ddbj.nig.ac.jp (for updates and notification of publication) WWW: http://www.ddbj.nig.ac.jp/ (for DDBJ WWW server) http://sakura.ddbj.nig.ac.jp/ (for DDBJ sequence data submission system) 5. Acknowledgment We are grateful to NCBI and EBI for a firm friendship and an excellent collaboration with us. We also thank JPO and KIPO for a steady cooperation with us. The operation of DDBJ is supported by the Ministry of Education, Culture, Sports, Science and Technology, and we would gratefully note this here. DDBJ uses the Super-SINET computer network for data collection, data exchange and various services. 6. Disclaimer While DDBJ endeavors to keep its data correct, DDBJ makes no representations or warranties of any kind about the completeness, accuracy or reliability with respect to the entries contained in the DDBJ periodical release. DDBJ also makes no legal liability or responsibility of merchantability or fitness for a particular purpose or that the use of the sequence data will not infringe any patent or other rights. Any receipt, reliance or use you place on such data is therefore strictly at your own risk. 7. File categories This release covers 21 categories (see also '3. Division categories'.) of organisms and others as follows: ------------------------------------------------------------------------------ ddbjbct; Category for bacteria ddbjcon; Category for CON (contigs) ddbjenv; Category for ENV (environmental samples) ddbjest; Category for EST (expressed sequence tags) ddbjgss; Category for GSS (genome survey sequences) ddbjhtc; Category for HTC (high throughput cDNA sequences) ddbjhtg; Category for HTG (high throughput genomic sequences) ddbjhum; Category for human ddbjinv; Category for invertebrates ddbjmam; Category for mammals other than primates and rodents ddbjpat; Category for patents ddbjphg; Category for phages ddbjpln; Category for plants ddbjpri; Category for primates other than human ddbjrod; Category for rodents ddbjsts; Category for STS (sequence tagged sites) ddbjsyn; Category for synthetic DNAs ddbjtsa; Category for TSA (transcriptome shotgun assemblies) ddbjuna; Category for unannotated sequences ddbjvrl; Category for viruses ddbjvrt; Category for vertebrates other than mammals ------------------------------------------------------------------------------ Some of above in the present release are recorded in multiple ddbj***###.seq files, each of which at most has 1.5 GB storage capacity as follows, respectively. --------------------- ddbjbct : 11 files ddbjenv : 7 files ddbjest : 151 files ddbjgss : 63 files ddbjhtc : 2 files ddbjhtg : 22 files ddbjhum : 6 files ddbjinv : 5 files ddbjmam : 2 files ddbjpat : 25 files ddbjpln : 8 files ddbjpri : 2 files ddbjrod : 5 files ddbjsts : 4 files ddbjtsa : 5 files ddbjvrl : 3 files ddbjvrt : 4 files ddbjcon : 23 files --------------------- The index files included in this release are ddbjacc#.idx, ddbjgen.idx, ddbjjou#.idx, and ddbjkey#.idx. See also '10. File list'. All of them except ddbjgen.idx are recorded in multiple ddbj***#.idx files, each of which at most has 1.5 GB storage capacity. 8. Sample of the contents in each file 8.1. Part of the contents in the file 'ddbjbct1.seq' This shows all pieces of information on one entry in DDBJ format. ------------------------------------------------------------------------------ LOCUS D87069 993 bp mRNA linear BCT 05-OCT-2006 DEFINITION Escherichia coli mRNA for RNA polymerase sigma subunit, truncated form of sigma-38, complete cds. ACCESSION D87069 VERSION D87069.1 KEYWORDS RNA polymerase sigma subunit, truncated form of sigma-38. SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 993) AUTHORS Jishage,M. TITLE Direct Submission JOURNAL Submitted (14-AUG-1996) to the DDBJ/EMBL/GenBank databases. Contact:Miki Jishage National Institute of Genetics, Molecular Genetics; Yata 1111, Mishima, Shizuoka 411, Japan REFERENCE 2 AUTHORS Jishage,M. and Ishihama,A. TITLE Variation in RNA polymerase sigma subunit composition within different stocks of Escherichia coli starin W3110 JOURNAL Unpublished (1996) REFERENCE 3 AUTHORS Ivanova,A., Renshaw,M., Guntaka,R. and Eisenstark,A. TITLE DNA base sequence variability in katF (putative sigma factor) gene Escherichia coli JOURNAL Nucleic Acids Res. 20, 5479-5480 (1992) REFERENCE 4 AUTHORS Takayanagi,Y., Tanaka,K. and Takahashi,H. TITLE Structure of the 5' upstream region and the regulation of the rpoS gene of Escherichia coli JOURNAL Mol. Gen. Genet. 243, 525-531 (1994) COMMENT FEATURES Location/Qualifiers source 1..993 /db_xref="taxon:562" /mol_type="mRNA" /organism="Escherichia coli" /strain="W3110" CDS 1..810 /note="the gene has four single base changes, resulting in two amino acid substitutions and an amber mutation" /product="RNA polymerase sigma subunit, truncated form of sigma-38" /protein_id="BAA13238.1" /transl_table=11 /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEYEPSDNDLAEEE LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAK" variation 75 /citation=[3] /replace="t" variation 97 /citation=[3] /replace="t" variation 99 /citation=[3] /replace="t" variation 808 /citation=[3] /replace="t" BASE COUNT 254 a 223 c 291 g 225 t ORIGIN 1 atgagtcaga atacgctgaa agttcatgat ttaaatgaag atgcggaatt tgatgagaac 61 ggagttgagg tttttgacga aaaggcctta gtagaatatg aacccagtga taacgatttg 121 gccgaagagg aactgttatc gcagggagcc acacagcgtg tgttggacgc gactcagctt 181 taccttggtg agattggtta ttcaccactg ttaacggccg aagaagaagt ttattttgcg 241 cgtcgcgcac tgcgtggaga tgtcgcctct cgccgccgga tgatcgagag taacttgcgt 301 ctggtggtaa aaattgcccg ccgttatggc aatcgtggtc tggcgttgct ggaccttatc 361 gaagagggca acctggggct gatccgcgcg gtagagaagt ttgacccgga acgtggtttc 421 cgcttctcaa catacgcaac ctggtggatt cgccagacga ttgaacgggc gattatgaac 481 caaacccgta ctattcgttt gccgattcac atcgtaaagg agctgaacgt ttacctgcga 541 accgcacgtg agttgtccca taagctggac catgaaccaa gtgcggaaga gatcgcagag 601 caactggata agccagttga tgacgtcagc cgtatgcttc gtcttaacga gcgcattacc 661 tcggtagaca ccccgctggg tggtgattcc gaaaaagcgt tgctggacat cctggccgat 721 gaaaaagaga acggtccgga agataccacg caagatgacg atatgaagca gagcatcgtc 781 aaatggctgt tcgagctgaa cgccaaatag cgtgaagtgc tggcacgtcg attcggtttg 841 ctggggtacg aagcggcaac actggaagat gtaggtcgtg aaattggcct cacccgtgaa 901 cgtgttcgcc agattcaggt tgaaggcctg cgccgtttgc gcgaaatcct gcaaacgcag 961 gggctgaata tcgaagcgct gttccgcgag taa // ------------------------------------------------------------------------------ 8.2. Part of the contents in the accession number index file 'ddbjacc1.idx' The following excerpt from the accession number index file illustrates the format of the index. ------------------------------------------------------------------------------ D00001 ECPBPA BCT X04516 D00002 ECPYRC BCT X04469 D00003 HUMP450M HUM D00003 D00004 FLBFLBL40 VRL D00004 D00005 IBAMEM682 VRL D00005 D00006 BACPNS1981 BCT D00006 D00007 CHKCALGRP VRT D00007 D00008 ECPNTAB BCT X04195 D00009 DROPER1 INV D00009 ------------------------------------------------------------------------------ 8.3. Part of the contents in the keyword phrase index file 'ddbjkey1.idx' Keyword phrases consist of names for gene products and other characteristics of sequence entries. ------------------------------------------------------------------------------ "COAT PROTEIN SMO511347 VRL AJ511347 'TNPA GENE UBA564903 BCT AJ564903 'ZINC-FINGER' MOTIF PRNS53 VRL X60546 (+) MATING TYPE SURFACE PROTEIN ABGPSSP PLN M94861 (1,3 TABETGLUB PLN Z22874 (1,3)-BETA-D-GLUCAN BINDING PROTEIN AJ606470 INV AJ606470 (1,3)BETA-GLUCAN SYNTHASE NCU09275 PLN U09275 (1,4)-BETA-D-ARABINOXYLAN ARABINOFURANOHYDROLASE ANAXHA PLN Z78011 ANTUAXHA PLN Z78010 (1,6)-BETA-GLUCAN BIOSYNTHESIS YSAKRE1A PLN M81588 (1-3)-BETA-GLUCANASE NTSP41AGN PLN X81560 PA13BGPT PLN X57794 (1-3,1-4)-BETA-D-GLUCANASE HVBDG PLN X52572 (1-4)-BETA-MANNAN ENDOHYDROLASE CAR278996 PLN AJ278996 CAR293305 PLN AJ293305 (2',5'-OLIGOISOADENYLATE SYNTHETASE-DEPENDENT) AL138776 HUM AL138776 (2'-5') OLIGO(A) SYNTHASE E16 SSO4G06 EST F14610 (2'-5')OLIGOADENYLATE SYNTHETASE HSA225089 HUM AJ225089 HUMSYN25A HUM D00068 SSA225090 MAM AJ225090 (6')-IB' AMINOGLYCOSIDE ACETYLTRANSFERASE AXY278514 BCT AJ278514 PAE291609 BCT AJ291609 (8,11)-LINOLEOYL DESATURASE COF245938 PLN AJ245938 ------------------------------------------------------------------------------ 8.4. Part of the contents in the journal citation index file 'ddbjjou1.idx' The journal citation index file lists all of the citations that appear in the references. ------------------------------------------------------------------------------ (ER) AAPS PHARMSCI. 4 (3), DOI 10.1208/PS040315 (2002) AY170916 ROD AY170916 (ER) AM. J. HUM. GENET. 76 (1) (2004) IN PRESS AY753209S1 HUM AY753209 AY753209S2 HUM AY753210 (ER) ARCH. VIROL. (2004) IN PRESS AF531505 VRL AF531505 AY518899 VRL AY518899 AY518900 VRL AY518900 AY518901 VRL AY518901 AY518902 VRL AY518902 AY518903 VRL AY518903 AY518904 VRL AY518904 AY518905 VRL AY518905 AY518906 VRL AY518906 AY518907 VRL AY518907 AY518908 VRL AY518908 AY518909 VRL AY518909 AY518910 VRL AY518910 AY518911 VRL AY518911 AY518912 VRL AY518912 AY518913 VRL AY518913 AY518914 VRL AY518914 AY518915 VRL AY518915 AY518916 VRL AY518916 AY518917 VRL AY518917 AY518918 VRL AY518918 AY518919 VRL AY518919 AY518920 VRL AY518920 AY518921 VRL AY518921 AY518922 VRL AY518922 AY518923 VRL AY518923 AY518924 VRL AY518924 AY518925 VRL AY518925 AY518926 VRL AY518926 AY518927 VRL AY518927 AY518928 VRL AY518928 AY518929 VRL AY518929 AY518930 VRL AY518930 AY518931 VRL AY518931 AY518932 VRL AY518932 AY521234 VRL AY521234 AY521235 VRL AY521235 AY521236 VRL AY521236 AY521237 VRL AY521237 AY521238 VRL AY521238 (ER) ARTERIOSCLER. THROMB. VASC. BIOL. (2004) IN PRESS AY563557 HUM AY563557 (ER) BIOCHEM. BIOPHYS. RES. COMMUN. 325 (1), 203-214 (2004) AY563137 HUM AY563137 (ER) BIOCHEM. J./10.1042/BJ20030293 HSA496460 HUM AJ496460 ------------------------------------------------------------------------------ 8.5. Part of the contents in the gene name index file 'ddbjgen.idx' This file lists all the gene names that appear in the feature table. ------------------------------------------------------------------------------ 'ARR BX927156 BCT BX927156 'BGLG BX927156 BCT BX927156 'BGLS BX927148 BCT BX927148 'BGLY' BX927156 BCT BX927156 'BRNQ AF305888 BCT AF305888 'COMK AL591983 BCT AL591983 AL596172 BCT AL596172 'CRCB BX927155 BCT BX927155 'CRTI BX927155 BCT BX927155 'DPPE LDDIPEP BCT Z34898 'FIC BX936398 BCT BX936398 ------------------------------------------------------------------------------ 9. Release history Release Date Entries Bases Comments 86 06/11 138,030,308 128,745,918,079 85 03/11 132,302,771 124,516,775,718 84 12/10 128,607,035 120,919,136,706 83 09/10 124,079,491 117,728,717,442 82 06/10 120,034,097 115,169,689,543 81 03/10 116,720,237 112,394,932,676 TPA excluded 80 12/09 112,314,250 109,636,862,252 SOURCE line modified 79 09/09 108,593,519 106,684,379,504 DBLINK line started PROJECT line terminated 78 06/09 105,737,359 104,597,360,291 77 03/09 102,099,156 101,765,388,414 76 12/08 98,220,409 98,741,908,446 75 09/08 92,840,037 95,219,505,205 TSA division started 74 06/08 87,903,140 91,294,770,939 73 03/08 83,167,582 86,099,950,395 KIPO inclusion started 72 12/07 79,004,098 82,592,245,487 Most of E-mail addresses discarded 71 09/07 76,273,345 79,706,204,461 70 06/07 72,801,679 76,788,510,646 69 03/07 67,523,680 71,775,679,500 PROJECT line started Indexes for categories terminated 68 12/06 64,267,978 68,259,314,742 1.5 GB storage started 67 09/06 61,144,621 65,443,024,193 66 06/06 58,176,628 62,945,843,881 65 03/06 55,890,995 60,564,721,635 TPA subcategories started 64 12/05 52,272,669 56,098,558,378 Some index files split 63 09/05 47,741,593 52,246,110,341 62 06/05 45,249,444 49,158,155,283 ENV division started Version for release note started 61 03/05 43,118,204 47,099,081,750 Changed style of release note 60 12/04 40,583,945 44,416,752,273 /db_xref="H-inv:**" started 59 09/04 37,926,117 42,245,956,937 58 06/04 34,917,581 39,812,635,108 57 03/04 32,693,678 38,008,449,840 56 12/03 30,405,173 36,079,046,032 55 09/03 27,753,140 34,280,225,489 54 06/03 25,149,821 32,162,041,177 53 02/03 23,250,813 29,711,299,332 52 12/02 20,354,812 26,931,456,316 51 09/02 18,401,358 22,782,404,136 TPA started 50 06/02 17,260,693 20,158,357,982 49 04/02 16,503,157 18,579,627,226 48 01/02 15,016,100 16,197,713,855 47 10/01 13,266,610 14,145,671,645 46 07/01 12,313,759 13,037,646,166 45 04/01 11,434,113 12,207,092,905 HTC division started 44 01/01 10,165,597 11,136,298,841 43 10/00 8,666,551 10,034,532,698 42 07/00 7,554,995 8,880,721,093 41 04/00 5,962,608 6,409,581,885 CON division started 40 01/00 5,388,125 4,762,696,173 RNA division terminated 39 10/99 4,810,773 3,728,000,562 NID and PID discarded 38 07/99 4,294,369 3,098,519,597 37 03/99 3,311,627 2,375,261,951 VERSION, /protein_id started 36 01/99 3,073,166 2,190,425,560 35 10/98 2,759,261 1,957,341,169 34 07/98 2,412,785 1,708,580,623 33 04/98 2,174,769 1,479,303,279 32 01/98 1,956,669 1,300,950,613 31 10/97 1,731,532 1,139,869,464 Adoption of the unified taxonomy database 30 07/97 1,534,115 992,788,339 NID and PID terminated 29 04/97 1,270,194 841,415,232 28 01/97 1,154,120 756,785,219 HTG division started ORG division terminated 27 10/96 936,697 608,103,057 GSS division started 26 07/96 835,552 551,932,448 25 04/96 744,490 499,300,364 /translation started 24 01/96 637,508 431,771,652 23 10/95 569,757 390,694,350 22 07/95 437,588 322,982,425 HUM division started 21 04/95 274,596 250,875,023 20 01/95 239,689 231,299,557 19 10/94 204,332 205,274,131 18 07/94 185,230 192,473,021 17 04/94 169,957 179,942,209 16 01/94 154,626 165,017,628 15 10/93 131,649 147,224,690 14 07/93 120,350 138,686,333 JPO inclusion started 13 04/93 112,067 129,784,445 12 01/93 97,683 120,815,244 EST division started 11 07/92 65,693 84,839,075 10 01/92 59,317 77,805,556 GenBank/EMBL inclusion started 9 07/91 1,130 2,002,124 8 01/91 879 1,573,442 7 07/90 681 1,154,211 6 01/90 496 841,236 5 07/89 395 679,378 4 01/89 302 535,985 3 07/88 230 345,850 2 01/88 142 199,392 1 07/87 66 108,970 Started with DDBJ only ------------------ Since release 81 ------------------ TPA category data have been excluded from DDBJ periodical release: Since September 2002 (DDBJ release 51), we provided DDBJ periodical releases including TPA category data. However, it is potentially confusing, because TPA category is not primary nucleotide sequence data. Therefore, DDBJ terminated to include TPA data. TPA data has been available from the other FTP site. See following site in detail. URL; http://www.ddbj.nig.ac.jp/whatsnew/whatsnew2009-e.html#090828 ------------------ Since release 80 ------------------ The format of the SOURCE line in DDBJ flat file has been changed: The SOURCE lines in some of DDBJ flat file included a common name like as GenBank flat file. The change is shown below ---------------- Old (-rel. 79) ---------------- Format: SOURCE [] Example: SOURCE Homo sapiens mitochondrion ---------------- New (rel. 80-) ---------------- Format: SOURCE [] [()] Example: SOURCE mitochondrion Homo sapiens (human) See also '2. DDBJ flat file format'. ------------------ Since release 79 ------------------ A new line, DBLINK, has replaced PROJECT line: Following the agreement at the INSD collaborative meeting in 2008, the scope of the project ID has expanded to include projects that are not necessarily targeted to the sequencing of a complete genome. In addition, there are other resources such as the Trace Assembly Archive at the NCBI and the like. Therefore, we have decided to replace the PROJECT line by a new line format, "DBLINK". The replacement is illustrated in the following; From the use of the PROJECT line (-release 78); ------------------------------------------------------------------------------- LOCUS AP000000 4700000 bp DNA circular BCT 27-FEB-2009 DEFINITION Escherichia coli DDBJ genomic DNA, complete genome. ACCESSION AP000000 VERSION AP000000.1 PROJECT GenomeProject:99999 KEYWORDS . ------------------------------------------------------------------------------- To the DBLINK line format (release 79-); ------------------------------------------------------------------------------- LOCUS AP000000 4700000 bp DNA circular BCT 27-FEB-2009 DEFINITION Escherichia coli DDBJ genomic DNA, complete genome. ACCESSION AP000000 VERSION AP000000.1 DBLINK Project:99999 KEYWORDS . ------------------------------------------------------------------------------- ------------------ Since release 75 ------------------ A new division for assembled mRNA sequences, Transcriptome Shotgun Assembly (TSA), has been included since the release 75. With new sequencing technologies in use, INSDC have faced many requests to accept assembled EST sequences. These sequence data have become more useful than used to be, although they may not be correctly assembled or exist in nature. Therefore, INSDC decided to collect assembled EST sequences and classified them into the new division 'TSA'. TSA sequences are shotgun assemblies of primary sequences deposited in the EST division of INSDC, race Archive (TA) or Short-Read Archive (SRA). Two specific keywords, "TSA" and "Transcriptome Shotgun Assembly", are present in all TSA entries. The new division code, "TSA", is also described in the the LOCUS line in all TSA entries. No format changes in the flat file are anticipated for the TSA division, however, note that TSA entries make use of the same PRIMARY line that is described for the entries in TPA category. The PRIMARY block contains references to the underlying reads/transcripts that are assembled to construct a TSA record. Note that it is required for a TSA submission to submit sequence data of primary transcripts to the EST division of INSDC, TA, or SRA. More information about how to submit a TSA entry is provided via the following URL; http://www.ddbj.nig.ac.jp/sub/tsa-e.html ------------------ Since release 73 ------------------ Introduction of the sequence data from the Korean Intellectual Property Office: The nucleotide sequence data transferred from Korean Intellectual Property Office (KIPO) have been included in DDBJ release. See also, '3. Division categories' and '3.1. Notice for patent related sequence data'. ------------------ Since release 72 ------------------ Deletion of E-mail address, phone and fax numbers from DDBJ flat file: To follow the Japanese law of protecting personal information, DDBJ deleted both phone and fax numbers, and E-mail address from the flat files of the entries submitted to DDBJ. It would be also helpful to protect DDBJ releases against SPAM mail senders. DDBJ retrofitted most of all entries submitted to DDBJ, not to GenBank or EMBL, by the DDBJ periodical release 72. Previously, the submitter information was described in JOURNAL line at REFERENCE 1 as, -------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Taro Mishima, DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan (E-mail:ddbj@ddbj.nig.ac.jp, URL:http://www.ddbj.nig.ac.jp/, Tel:81-12-345-6789, Fax:81-12-345-9876) -------------------------------------------------------------------------------- After the deletion or the information in question, DDBJ flat file is either one of the following two types; Type 1: Phone and fax numbers and E-mail address are deleted. -------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Contact:Taro Mishima DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan URL :http://www.ddbj.nig.ac.jp/ ------------------------------------------------------------------------------- Type 2: When the submitters wish to keep their contact information disclosed, it is described as, ------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Contact:Taro Mishima DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan URL :http://www.ddbj.nig.ac.jp/ E-mail :ddbj@ddbj.nig.ac.jp Phone :81-12-345-6789 Fax :81-12-345-9876 ------------------------------------------------------------------------------- ------------------ Since release 69 ------------------ Introduction of the project ID at PROJECT line in DDBJ flat file: Following the agreement at the INSD collaborative meeting in 2006, INSDC has started to assign the project ID for submissions from sequencing projects. The description of project ID is shown as below; ---------------------------------------------------------------------------- A unique identifier, assigned at the time of the submission by a sequencing project that informed INSDC of the submission beforehand. It is recommended that the submitter quotes the assigned project ID in all communication with INSDC databases to allow for easier and faster tracking of issues. The project ID field provides an umbrella identifier that points to all related sequence data for the project. ---------------------------------------------------------------------------- The PROJECT lines contain INSDC-assigned ID for the sequencing project. It will be appeared between VERSION and KEYWORDS lines in DDBJ flat files, from the DDBJ periodical release, 69 as shown below. See also '2. DDBJ flat file format'. ---------------------------------------------------------------------------- ACCESSION AB012345 VERSION AB012345.1 PROJECT GenomeProject:123 KEYWORDS . ---------------------------------------------------------------------------- Termination of providing the index files for each category: ------------------ Since release 68 ------------------ Split of files: We changed the maximum file size from 300 MB to 1.5 GB, because the network capacity has been remarkably increased. Each file named as ddbj***##.seq has at most 1.5 GB storage capacity. See also the sections, '7. File categories' and '10. File list'. ------------------ Since release 64 ------------------ Split of index files: In the present release, some of index files (ddbjacc.idx, ddbjjou.idx, and ddbjkey.idx) have been greater than 2 GB in the file size. So, these have been recorded in multiple ddbj****.idx files, each of which at most has 1.5 GB storage capacity as follows, respectively. See also 7., 8.2., 8.3., 8.4. and 10. ------------------ Since release 62 ------------------ Release version number is introduced: DDBJ has started to include the item, 'version', for its release note, which indicates a version for its periodical release. It is expressed like '62.0', in which the digit(s) after the period is a version number. The reason for adding the version number is that a released data is sometimes revised due to urgent and necessary corrections. The number is increased by one every time when a revised periodical release is made public until the next release. Introduction of ENV division: Recently, the submissions of the sequences derived from environmental samples have rapidly increased. To accommodate such submissions, a new division, ENV, has been created (See also '3.1. Division categories'). This division contains the sequences obtained via direct molecular isolation such as PCR, DGGE, or any anonymous method. In the past, the sequences derived from environmental samples belonged to taxonomic divisions, mainly BCT. At DDBJ, the retrofit to transfer relevant entries from taxonomic divisions to the ENV division starts in the present release, and ends by the next periodical release. Please note that during this transitional period, some entries to be eventually placed in the ENV division will be found in other divisions. Strand information is removed: The strand information of LOCUS line in the flat file has been removed as shown below. See also '2.1. LOCUS line'. ---------------------------------------------------------------------------- Old (-rel. 61): 44-44 space 45-47 spaces, ss- (single-stranded), ds- (double-stranded), or ms- (mixed-stranded) New (rel. 62-): 44-47 spaces ---------------------------------------------------------------------------- ------------------ Since release 61 ------------------ The style of release note (this file) has been changed. Some entries have the sequential format for the secondary accession numbers in the ACCESSION line, in order to make the expression of secondary accession numbers in the past short. For example; ------------------------------------------------------------------------------ Before; ACCESSION AB000802 D85885 D85886 D85887 After; ACCESSION AB000802 D85885-D85887 ------------------------------------------------------------------------------ See also '2.3. ACCESSION line'. ------------------ Since release 60 ------------------ The cross-reference to the H-invitational has been included. ------------------ Since release 56 ------------------ The three data banks have agreed that the maximum length limitation (350 kb) of a submitted sequence be relaxed. The BASE COUNT line of the DDBJ flat file format has been changed, corresponding to the relaxation of the maximum sequence length restriction in the entry that had been practiced at DDBJ/EMBL/GenBank International Nucleotide Sequence Databases. In the BASE COUNT line of the DDBJ flat file, 6 digits had been allocated for each number of a, c, g, t and other bases in the sequence. Hereafter, in the new flat file format, 9 digits are allocated for each number of a, c, g and t, while the numbers of other bases are removed. In accordance with the relaxation of sequence length limitation, GenBank had already dropped the BASE COUNT line from their flat file format from GenBank Release 138 (Oct. 2003). We DDBJ have decided to maintain the BASE COUNT line in our flat file format from the view that GC contents are still important information to characterize the sequence. The changes in the BASE COUNT line are shown below. ---------------------------------------------------------------------------- Old (-rel. 55): 1 6 11 16 21 26 31 36 41 46 51 56 61 66 71 |----|----|----|----|----|----|----|----|----|----|----|----|----|----| BASE COUNT 123456 a 123456 c 123456 g 123456 t 123456 others New (rel. 56-): 1 6 11 16 21 26 31 36 41 46 51 56 61 66 71 |----|----|----|----|----|----|----|----|----|----|----|----|----|----| BASE COUNT 123456789 a 123456789 c 123456789 g 123456789 t ---------------------------------------------------------------------------- ------------------ Since release 54 ------------------ '/sequenced_mol' qualifier has been changed to '/mol_type' qualifier. We accordingly completed retrofitting the pertinent entries. This change was made on the agreement at the INSD collaborative meeting in 2002. ------------------ Since release 51 ------------------ The format of LOCUS line in the flat file has been changed as shown below to adjust to the GenBank format. ------------------------------------------------------------------------------ Old (-rel. 50): LOCUS AB000001 660 bp DNA PLN 01-FEB-2001 New (rel. 51-): LOCUS AB000001 660 bp DNA linear PLN 01-FEB-2001 ------------------------------------------------------------------------------ ------------------ Since release 45 ------------------ The HTC (High Throughput cDNA) division has been included. This is to include unfinished high throughput cDNA sequences, each of which has 5'UTR and 3'UTR at both ends and part of a coding region. The sequence may also include introns. When the sequence becomes finished later, it moves to the corresponding taxonomic division. The sequence is accompanied with a keyword, HTC (High Throughput cDNA), which is dropped when the sequence is finished and moved to a taxonomic division. ------------------ Since release 41 ------------------ The CON division has been included. This division is to show the order of related sequences in a genome, and expressed by join and the accession numbers of the sequences. The contents of the CON division are compiled by the three data banks not by the data submitter. ------------------ Since release 40 ------------------ The RNA division was terminated. ------------------ Since release 37 ------------------ The three data banks include the item VERSION in the flat file, which indicates a version of a submitted nucleotide sequence. It is expressed like AB123456.1, in which the digit(s) after the period is a version number. The reason for adding VERSION is that since a released sequence sometimes revised by the submitter, the accession number alone cannot specify the sequence in question causing the user a trouble. The number is increased by one every time when a revised sequence is made public. Accordingly, the translated protein sequence will be accompanied with a /protein_id which is expressed as BAA12345.1, in which the digit(s) after the period is again a version number. The number is increased by one when the corresponding nucleotide sequence is revised and the protein sequence is changed as a result, and when the revised protein sequence is made public. ------------------ Since release 31 ------------------ We have started adopting the unified taxonomy database to unify the biological source of the sequence. The database is made up with scientific names, ID of unidentified organisms, and synthetic constructs etc. ------------------ Since release 30 ------------------ NID and PID were terminated. This change was made on the agreement at the INSD collaborative meeting in 1999. ------------------ Since release 28 ------------------ The HTG (High Throughput Genomic sequence) has been included. We terminated the ORG (Organelle) division. ------------------ Since release 27 ------------------ The GSS division has been included. GSS stands for Genome Survey Sequence, which is similar to EST, except that GSS is genomic DNA whereas EST is cDNA. ------------------ Since release 25 ------------------ DDBJ release contains amino acid sequences that were translated from the corresponding nucleotide sequences of the database. ------------------ Since release 22 ------------------ The HUM division has been included. We have the human (HUM) division solely for human sequences and the primate (PRI) division for non-human primate sequences. ------------------ Since release 12 ------------------ The EST (Expressed Sequence Tag) division has been included. ------------------ Since release 10 ------------------ The sequences submitted to GenBank or EMBL have been included in the release. 10. File list The files in this release are arranged in the following order with non-labeled format. ----------------------------------------------------------------------- file name file size ----------------------------------------------------------------------- ddbjrel.txt (DDBJ release note) 75980 ddbjacc1.idx (Accession number index file 1) 1499999996 ddbjacc2.idx (Accession number index file 2) 1500000019 ddbjacc3.idx (Accession number index file 3) 1500000032 ddbjacc4.idx (Accession number index file 4) 885521119 ddbjgen.idx (Gene name index file) 229710830 ddbjjou1.idx (Journal citation index file 1) 1499999862 ddbjjou2.idx (Journal citation index file 2) 1499961137 ddbjjou3.idx (Journal citation index file 3) 1334670172 ddbjjou4.idx (Journal citation index file 4) 1471131266 ddbjjou5.idx (Journal citation index file 5) 136074781 ddbjkey1.idx (Keyword phrase index file 1) 1499999960 ddbjkey2.idx (Keyword phrase index file 2) 1499999980 ddbjkey3.idx (Keyword phrase index file 3) 1499999978 ddbjkey4.idx (Keyword phrase index file 4) 850308866 ----------------------------------------------------------------------- file name number of entries number of bases file size ----------------------------------------------------------------------- ddbjbct1.seq 135212 609776515 1503969454 ddbjbct2.seq 96547 649741376 1502458056 ddbjbct3.seq 468 676025691 1504255457 ddbjbct4.seq 351 667355421 1506654822 ddbjbct5.seq 382 665105176 1505116239 ddbjbct6.seq 538 662322688 1504754899 ddbjbct7.seq 374 656967099 1499259988 ddbjbct8.seq 373 655513155 1502702275 ddbjbct9.seq 223937 540291482 1499000291 ddbjbct10.seq 159638 620124976 1499078122 ddbjbct11.seq 92323 133204757 387899275 ddbjenv1.seq 558864 420321328 1499001520 ddbjenv2.seq 570127 398182468 1499001464 ddbjenv3.seq 499494 443375540 1499001214 ddbjenv4.seq 669637 281814139 1499001136 ddbjenv5.seq 616312 387229574 1499000473 ddbjenv6.seq 535650 428979935 1499001881 ddbjenv7.seq 78141 40026632 188125452 ddbjest1.seq 460406 172263035 1499001737 ddbjest2.seq 488223 191102461 1499001892 ddbjest3.seq 495400 204798265 1499000908 ddbjest4.seq 476951 203147057 1499002304 ddbjest5.seq 547012 288682192 1499003322 ddbjest6.seq 548239 338093397 1499001472 ddbjest7.seq 536481 306069669 1499000162 ddbjest8.seq 409453 134439965 1498999933 ddbjest9.seq 483989 206356560 1499001712 ddbjest10.seq 511524 237279266 1499003347 ddbjest11.seq 468218 199759421 1499000504 ddbjest12.seq 375146 134682408 1499003771 ddbjest13.seq 274273 83780193 1499004053 ddbjest14.seq 274309 107336315 1499002359 ddbjest15.seq 376924 175743025 1499002398 ddbjest16.seq 479920 245033596 1498999984 ddbjest17.seq 460334 245018409 1499001903 ddbjest18.seq 451949 245643852 1499000613 ddbjest19.seq 462155 225455846 1499002492 ddbjest20.seq 462448 274023967 1499002830 ddbjest21.seq 465811 291252280 1499001668 ddbjest22.seq 468669 240994941 1499000308 ddbjest23.seq 445520 261873105 1499000408 ddbjest24.seq 497126 275664890 1499001067 ddbjest25.seq 549814 319746115 1499000440 ddbjest26.seq 425324 215648573 1499002317 ddbjest27.seq 430712 253199061 1499000776 ddbjest28.seq 474876 268606070 1499001170 ddbjest29.seq 515033 265776731 1499000732 ddbjest30.seq 453130 241071508 1499001214 ddbjest31.seq 454350 252489405 1499002562 ddbjest32.seq 439681 280021528 1499000381 ddbjest33.seq 410679 296525469 1499002866 ddbjest34.seq 478026 285244577 1499001170 ddbjest35.seq 647200 373713920 1499002618 ddbjest36.seq 477536 296288541 1499001088 ddbjest37.seq 428543 262822814 1499002722 ddbjest38.seq 258264 97497995 1499002197 ddbjest39.seq 259334 103778856 1499004129 ddbjest40.seq 296015 140286218 1499001593 ddbjest41.seq 480222 267835757 1499001843 ddbjest42.seq 467350 263767695 1499000508 ddbjest43.seq 454218 237429952 1499001152 ddbjest44.seq 470055 277427428 1499001986 ddbjest45.seq 518424 268402009 1499000499 ddbjest46.seq 427249 250115893 1499001591 ddbjest47.seq 552524 281994715 1499001588 ddbjest48.seq 439841 253121787 1499006802 ddbjest49.seq 409985 240280556 1499001127 ddbjest50.seq 262461 135847068 1499001005 ddbjest51.seq 267679 110348486 1499004619 ddbjest52.seq 300530 130883374 1499001783 ddbjest53.seq 396529 215864817 1499000019 ddbjest54.seq 556257 321038114 1499002029 ddbjest55.seq 430943 287291576 1499001668 ddbjest56.seq 446146 240148298 1499000375 ddbjest57.seq 475087 284118203 1499000788 ddbjest58.seq 415901 228689802 1499001318 ddbjest59.seq 483943 273394997 1499000985 ddbjest60.seq 451830 268497490 1499002261 ddbjest61.seq 422909 244363124 1499001009 ddbjest62.seq 476131 323162432 1499000140 ddbjest63.seq 466117 284994572 1499000291 ddbjest64.seq 444616 231051955 1499002775 ddbjest65.seq 442468 264902686 1499002226 ddbjest66.seq 432341 276174194 1499000770 ddbjest67.seq 394882 254449210 1499003674 ddbjest68.seq 420417 242837509 1499002449 ddbjest69.seq 426753 238378886 1499000237 ddbjest70.seq 426596 236389008 1499003218 ddbjest71.seq 435582 235693747 1499000550 ddbjest72.seq 478319 266809679 1499001355 ddbjest73.seq 541460 335812999 1499000124 ddbjest74.seq 556874 348166782 1499000869 ddbjest75.seq 495809 311550026 1499000626 ddbjest76.seq 496969 292945128 1499008348 ddbjest77.seq 390647 289834938 1499000429 ddbjest78.seq 487714 295265988 1498999936 ddbjest79.seq 379577 272621860 1499001403 ddbjest80.seq 392199 263416199 1499002191 ddbjest81.seq 369688 257989338 1499002845 ddbjest82.seq 414204 327082137 1499003708 ddbjest83.seq 461066 293501150 1499002476 ddbjest84.seq 465941 315700661 1499000351 ddbjest85.seq 529243 295399727 1499002519 ddbjest86.seq 518118 211263124 1499000713 ddbjest87.seq 526394 296574948 1499000053 ddbjest88.seq 474697 323577444 1499000545 ddbjest89.seq 523278 302064182 1499000819 ddbjest90.seq 653325 323738871 1499000045 ddbjest91.seq 599922 259894732 1499000527 ddbjest92.seq 467956 288379303 1499000242 ddbjest93.seq 514255 318432294 1499001936 ddbjest94.seq 559803 183428191 1499004108 ddbjest95.seq 524544 324522498 1499002694 ddbjest96.seq 501868 276701146 1499001802 ddbjest97.seq 390923 257194416 1499000215 ddbjest98.seq 652885 139500942 1499002527 ddbjest99.seq 456081 295556922 1498999973 ddbjest100.seq 587074 225214205 1499000646 ddbjest101.seq 503482 298156484 1499001682 ddbjest102.seq 494614 319311759 1499001546 ddbjest103.seq 533774 266924368 1499000678 ddbjest104.seq 577706 218663665 1498999932 ddbjest105.seq 485059 302170466 1499000142 ddbjest106.seq 419539 276960667 1499001908 ddbjest107.seq 481212 283862518 1499002518 ddbjest108.seq 444909 295941243 1499002815 ddbjest109.seq 488269 363008482 1499000060 ddbjest110.seq 419374 262567455 1499000388 ddbjest111.seq 404218 273085598 1499001184 ddbjest112.seq 460632 277141428 1499001794 ddbjest113.seq 444357 281747592 1499000448 ddbjest114.seq 452322 277800269 1499002328 ddbjest115.seq 368163 211055215 1499000854 ddbjest116.seq 381632 241848425 1499002144 ddbjest117.seq 537129 251504151 1499002725 ddbjest118.seq 439999 274561076 1499003536 ddbjest119.seq 448741 292087142 1499000527 ddbjest120.seq 491927 304155046 1499002785 ddbjest121.seq 296169 171770313 1499003694 ddbjest122.seq 423217 154106676 1499003102 ddbjest123.seq 537759 249183273 1499000353 ddbjest124.seq 593293 303947468 1499003811 ddbjest125.seq 427024 264274547 1499001816 ddbjest126.seq 586864 280678072 1498999976 ddbjest127.seq 517679 294612421 1499002934 ddbjest128.seq 504442 372676959 1499002528 ddbjest129.seq 536699 303103357 1499003492 ddbjest130.seq 530336 332617483 1499001540 ddbjest131.seq 535277 261376882 1499001891 ddbjest132.seq 458637 58529164 1499002000 ddbjest133.seq 443557 150485709 1499001569 ddbjest134.seq 493320 306022635 1499002575 ddbjest135.seq 423422 293760646 1499000826 ddbjest136.seq 461417 304159858 1499000353 ddbjest137.seq 477740 186002739 1499003067 ddbjest138.seq 443605 280292097 1499002385 ddbjest139.seq 480462 311378466 1499002197 ddbjest140.seq 433570 268044552 1499004089 ddbjest141.seq 474326 274383890 1499002029 ddbjest142.seq 379567 248667824 1499004449 ddbjest143.seq 355451 217891909 1499002470 ddbjest144.seq 393595 246099834 1499001301 ddbjest145.seq 485224 279950774 1499000215 ddbjest146.seq 469316 250591226 1499002285 ddbjest147.seq 473928 281851739 1499001856 ddbjest148.seq 493402 232330866 1499001398 ddbjest149.seq 595221 297616706 1499001285 ddbjest150.seq 453575 310752443 1499001207 ddbjest151.seq 426828 165400284 1359177203 ddbjgss1.seq 478654 345551276 1499001070 ddbjgss2.seq 445942 341934724 1499002683 ddbjgss3.seq 444280 333594122 1499000463 ddbjgss4.seq 568993 277139259 1499000386 ddbjgss5.seq 489365 254456695 1499001356 ddbjgss6.seq 466504 255969452 1499002717 ddbjgss7.seq 391837 194332007 1499003154 ddbjgss8.seq 430813 214176398 1499001870 ddbjgss9.seq 489515 269094505 1499000434 ddbjgss10.seq 542985 302107245 1499002715 ddbjgss11.seq 513308 321264665 1499001592 ddbjgss12.seq 545611 351656605 1499001942 ddbjgss13.seq 499782 357472293 1499002025 ddbjgss14.seq 515589 356865379 1499002112 ddbjgss15.seq 609680 343118165 1499000398 ddbjgss16.seq 606045 369193617 1499000866 ddbjgss17.seq 563073 318666325 1499001400 ddbjgss18.seq 522813 373256100 1499000627 ddbjgss19.seq 511563 339964573 1499002588 ddbjgss20.seq 575741 367949166 1499001540 ddbjgss21.seq 579789 413710957 1499000061 ddbjgss22.seq 536315 321562397 1499001315 ddbjgss23.seq 481224 285496491 1499002428 ddbjgss24.seq 518457 340161170 1499000088 ddbjgss25.seq 529543 336987499 1499002987 ddbjgss26.seq 538543 353181306 1499000875 ddbjgss27.seq 592043 291291608 1499001409 ddbjgss28.seq 576567 289680648 1499001288 ddbjgss29.seq 555113 321851225 1499000647 ddbjgss30.seq 464521 384361016 1499002715 ddbjgss31.seq 475280 345785532 1499002908 ddbjgss32.seq 527708 372716204 1499000056 ddbjgss33.seq 597637 344649813 1499001023 ddbjgss34.seq 447998 333002924 1499000083 ddbjgss35.seq 524934 359031405 1499001889 ddbjgss36.seq 511664 243096385 1499001883 ddbjgss37.seq 574228 299789711 1499001801 ddbjgss38.seq 420395 307510866 1499001135 ddbjgss39.seq 409705 336739011 1499003528 ddbjgss40.seq 423896 347453405 1499002712 ddbjgss41.seq 415029 330724071 1499001213 ddbjgss42.seq 423468 345362845 1498999954 ddbjgss43.seq 421334 347711802 1499002842 ddbjgss44.seq 411814 331352239 1498999968 ddbjgss45.seq 518399 343816456 1499000708 ddbjgss46.seq 538266 341875010 1499000251 ddbjgss47.seq 596844 401376120 1499000532 ddbjgss48.seq 587713 413178676 1498999924 ddbjgss49.seq 476785 327268461 1499002374 ddbjgss50.seq 505385 301739844 1498999945 ddbjgss51.seq 547730 332100261 1499001976 ddbjgss52.seq 525471 367542478 1499001853 ddbjgss53.seq 559594 416402791 1499002111 ddbjgss54.seq 565877 327107835 1499001960 ddbjgss55.seq 533301 402560263 1499000102 ddbjgss56.seq 539805 336557597 1499001420 ddbjgss57.seq 538967 344956046 1499000484 ddbjgss58.seq 477465 381725957 1499000482 ddbjgss59.seq 495100 442930774 1499001187 ddbjgss60.seq 511966 432054272 1499000554 ddbjgss61.seq 581746 263977760 1499001753 ddbjgss62.seq 765680 133961703 1499000691 ddbjgss63.seq 216372 83449647 523734053 ddbjhtc1.seq 273996 358282844 1499002339 ddbjhtc2.seq 295887 303666467 1083893412 ddbjhtg1.seq 11401 1118110528 1499022921 ddbjhtg2.seq 7563 1118342964 1499135250 ddbjhtg3.seq 5917 1130757219 1499303366 ddbjhtg4.seq 5459 1140417125 1499265486 ddbjhtg5.seq 5349 1144093839 1499338243 ddbjhtg6.seq 5357 1144190182 1499120220 ddbjhtg7.seq 6590 1132450791 1499125218 ddbjhtg8.seq 6856 1143185495 1499188321 ddbjhtg9.seq 6261 1139333249 1499104648 ddbjhtg10.seq 6339 1133204611 1499026181 ddbjhtg11.seq 7036 1123162294 1499166033 ddbjhtg12.seq 7003 1125614274 1499016498 ddbjhtg13.seq 6940 1141380164 1499127711 ddbjhtg14.seq 6974 1135024611 1499074097 ddbjhtg15.seq 6754 1141271821 1499200895 ddbjhtg16.seq 6299 1138703436 1499202152 ddbjhtg17.seq 6677 1139894567 1499154839 ddbjhtg18.seq 7966 1145527879 1499176319 ddbjhtg19.seq 6758 1140707590 1499113434 ddbjhtg20.seq 6569 1156196760 1499147932 ddbjhtg21.seq 6512 1159396582 1499164397 ddbjhtg22.seq 2690 421133994 550006875 ddbjhum1.seq 31639 1044063625 1499196026 ddbjhum2.seq 8099 1069252999 1499185036 ddbjhum3.seq 146280 827340817 1499031693 ddbjhum4.seq 22432 1070668952 1499171235 ddbjhum5.seq 225518 596490023 1499000169 ddbjhum6.seq 102988 193332589 490993949 ddbjinv1.seq 254739 677101876 1500565683 ddbjinv2.seq 449056 434076884 1499002591 ddbjinv3.seq 206317 704232143 1499431529 ddbjinv4.seq 407115 381493203 1499000222 ddbjinv5.seq 231734 233018941 936365693 ddbjmam1.seq 244516 754546917 1499001428 ddbjmam2.seq 23332 20480684 77085589 ddbjpat1.seq 1053905 509565505 1499300612 ddbjpat2.seq 752500 502040601 1499000097 ddbjpat3.seq 714447 342596843 1499000983 ddbjpat4.seq 714569 585311520 1499000984 ddbjpat5.seq 712730 403344491 1499001351 ddbjpat6.seq 728295 304410574 1499000870 ddbjpat7.seq 682536 351529991 1499285169 ddbjpat8.seq 697150 525830186 1499000364 ddbjpat9.seq 910243 548527398 1499000963 ddbjpat10.seq 646483 470600770 1499001742 ddbjpat11.seq 633681 366647905 1499000070 ddbjpat12.seq 560946 536016073 1499901198 ddbjpat13.seq 599074 398334171 1499001520 ddbjpat14.seq 546299 514142147 1499000513 ddbjpat15.seq 1225800 44832130 1499001000 ddbjpat16.seq 804505 603683837 1499000714 ddbjpat17.seq 922801 462182998 1499000396 ddbjpat18.seq 1211577 448453016 1499001381 ddbjpat19.seq 917619 619502934 1499000124 ddbjpat20.seq 679496 735530491 1499000047 ddbjpat21.seq 1279785 211071601 1499002193 ddbjpat22.seq 700838 498052064 1499000398 ddbjpat23.seq 1249044 148350262 1499000178 ddbjpat24.seq 1073028 309060108 1499001895 ddbjpat25.seq 537932 323942602 940472591 ddbjphg.seq 5992 53450705 130843173 ddbjpln1.seq 97821 968419008 1503251721 ddbjpln2.seq 285679 501559346 1499030830 ddbjpln3.seq 91920 867142527 1499199031 ddbjpln4.seq 301003 611606964 1499001569 ddbjpln5.seq 254272 565661659 1499001394 ddbjpln6.seq 503516 406916370 1499002624 ddbjpln7.seq 139871 832457127 1499001480 ddbjpln8.seq 375662 366914336 1259355937 ddbjpri1.seq 35592 1098152240 1499000087 ddbjpri2.seq 58805 162885931 329625444 ddbjrod1.seq 36828 1015160499 1499118857 ddbjrod2.seq 5896 1092626162 1499079608 ddbjrod3.seq 14903 1093876624 1499003202 ddbjrod4.seq 104123 843873204 1499154273 ddbjrod5.seq 256571 339275717 892339939 ddbjsts1.seq 416139 209921210 1499003780 ddbjsts2.seq 337700 238081739 1499002445 ddbjsts3.seq 563552 186329412 1499000105 ddbjsts4.seq 4289 1347104 8741726 ddbjsyn.seq 98144 152385392 532920969 ddbjtsa1.seq 664121 275500016 1499000714 ddbjtsa2.seq 650267 329909737 1499000689 ddbjtsa3.seq 537828 374590668 1499000179 ddbjtsa4.seq 539202 381537066 1499001573 ddbjtsa5.seq 8502 4901048 18464117 ddbjuna.seq 292 490474 1412862 ddbjvrl1.seq 385355 406805507 1499000239 ddbjvrl2.seq 361673 422198702 1499000664 ddbjvrl3.seq 250176 292049730 1037204952 ddbjvrt1.seq 244254 692202401 1499004947 ddbjvrt2.seq 67605 985175799 1499108848 ddbjvrt3.seq 272873 707794468 1499000254 ddbjvrt4.seq 237753 291736499 901210799 ----------------------------------------------------------------------- Total 138030308 128745918079 473391709460 ddbjcon1.seq 103982 0 1499006730 ddbjcon2.seq 94307 0 1500647340 ddbjcon3.seq 275730 0 1499017449 ddbjcon4.seq 443050 0 1499003599 ddbjcon5.seq 297559 0 1499198373 ddbjcon6.seq 263167 0 1499000543 ddbjcon7.seq 268024 0 1499001509 ddbjcon8.seq 268331 0 1499000976 ddbjcon9.seq 279157 0 1499001905 ddbjcon10.seq 321789 0 1499003374 ddbjcon11.seq 308930 0 1499000000 ddbjcon12.seq 278667 0 1499004249 ddbjcon13.seq 289202 0 1499004150 ddbjcon14.seq 290724 0 1499005483 ddbjcon15.seq 247502 0 1499002916 ddbjcon16.seq 242251 0 1499002191 ddbjcon17.seq 543262 0 1499000396 ddbjcon18.seq 466198 0 1499001094 ddbjcon19.seq 394721 0 1499000594 ddbjcon20.seq 341041 0 1499013411 ddbjcon21.seq 141614 0 1499057077 ddbjcon22.seq 349051 0 1499471464 ddbjcon23.seq 13417 0 182517280 The entries and bases in the CON division are not counted in the numbers given on the top of the release note or 'Total' on the above table.