DNA Data Bank of Japan DNA Database Release 87.0, Sep. 2011, including 142,339,601 entries, 131,276,394,833 bases Last published date in the present release: August 26, 2011 ------------------------------------------------------------------------------- Table of contents ------------------------------------------------------------------------------- 1. Introduction 1.1. Announcement for changes in the present release 1.2. Announcement for the forthcoming changes 2. DDBJ flat file format 2.1. LOCUS line 2.2. DEFINITION line 2.3. ACCESSION line 2.4. VERSION line 2.5. KEYWORDS line 2.6. SOURCE line 2.7. REFERENCE line 2.8. COMMENT line 2.9. FEATURES line 2.10. BASE COUNT line 2.11. ORIGIN line 3. Division categories 3.1. Notice for patent related sequence data 4. DDBJ staff 5. Acknowledgment 6. Disclaimer 7. File categories 8. Sample of the contents in each file 8.1. Part of the contents in the file 'ddbjbct1.seq' 8.2. Part of the contents in the accession number index file 'ddbjacc1.idx' 8.3. Part of the contents in the keyword phrase index file 'ddbjkey1.idx' 8.4. Part of the contents in the journal citation index file 'ddbjjou1.idx' 8.5. Part of the contents in the gene name index 'ddbjgen.idx' 9. Release history 10. File list ------------------------------------------------------------------------------- 1. Introduction The present release contains the newest data prepared by the DNA Data Bank of Japan (DDBJ), GenBank (*), and EMBL-Bank/European Bioinformatics Institute (EMBL-Bank/EBI) as of August 26, 2011. This unified database was made possible thanks to the international collaboration among the three data banks. All the entries have accordingly been annotated using the feature keys common to them. In 2005, DDBJ, EMBL-Bank and GenBank agreed to call their collaboration "the International Nucleotide Sequence Database Collaboration (INSDC); http://www.insdc.org " and to call the unified nucleotide sequence database "the International Nucleotide Sequence Database (INSD)". *'GenBank' is a trademark of NIH, USA, and is operated by National Center for Biotechnology Information (NCBI) at NIH. 1.1. Announcement for changes in the present release Nothing particular. 1.2. Announcement for the forthcoming changes Revision of the DDBJ/EMBL/GenBank Feature Table: Definition: Following the agreement at the INSD collaborative meeting in 2011, the document, DDBJ/EMBL/GenBank Feature Table: Definition, will be revised in October, 2011. See also '2.9. FEATURES line' below. 2. DDBJ flat file format The database is a collection of "entry" which is the unit of the data. The entries submitted to databanks were processed and publicized according to the DDBJ format for distribution (flat file). The flat file includes the sequence and the information of submitters, references, source organisms, and "feature" information, etc. The items of the DDBJ flat file are explained at following; ------------------------------------------------------------------------------- LOCUS AB000000 450 bp mRNA linear HUM 08-JUL-2002 DEFINITION Homo sapiens GAPD mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds. ACCESSION AB000000 VERSION AB000000.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 450) AUTHORS Mishima,H. and Shizuoka,T. TITLE Direct Submission JOURNAL Submitted (30-NOV-2000) to the DDBJ/EMBL/GenBank databases. Contact:Hanako Mishima National Institute of Genetics, DNA Data Bank of Japan; 1111, Yata, Mishima, Shizuoka 411-8540, Japan REFERENCE 2 AUTHORS Mishima,H., Shizuoka,T. and Fuji,I. TITLE Glyceraldehyde-3-phosphate dehydrogenase expressed in human liver JOURNAL Unpublished (2002) COMMENT Human cDNA sequencing project. FEATURES Location/Qualifiers source 1..450 /chromosome="12" /clone="GT200015" /clone_lib="lambda gt11 human liver cDNA (GeneTech. No.20)" /map="12p13" /mol_type="mRNA" /organism="Homo sapiens" /tissue_type="liver" CDS 86..>450 /codon_start=1 /gene="GAPD" /product="glyceraldehyde-3-phosphate dehydrogenase" /protein_id="BAA12345.1" /transl_table=1 /translation="MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMT YMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPKEIPWGETSAEFVVEYTG VFTDKDKAVAQLKGGAKKV" BASE COUNT 102 a 119 c 131 g 98 t ORIGIN 1 cccacgcgtc cggtcgcatc gcacttgtag ctctcgaccc ccgcatctca tccctcctct 61 cgcttagttc agatcgaaat cgcaaatggc gaagattaag atcgggatca atgggttcgg 121 gaggatcggg aggctcgtgg ccagggtggc cctgcagagc gacgacgtcg agctcgtcgc 181 cgtcaacgac cccttcatca ccaccgacta catgacatac atgttcaagt atgacactgt 241 gcacggccag tggaagcatc atgaggttaa ggtgaaggac tccaagaccc ttctcttcgg 301 tgagaaggag gtcaccgtgt tcggctgcag gaaccctaag gagatcccat ggggtgagac 361 tagcgctgag tttgttgtgg agtacactgg tgttttcact gacaaggaca aggccgttgc 421 tcaacttaag ggtggtgcta agaaggtctg // ------------------------------------------------------------------------------- 2.1. LOCUS line The format of LOCUS line in the flat file is shown below; --------- -------- Positions Contents --------- -------- 01-05 'LOCUS' 06-12 spaces 13-28 Locus name 29-29 space 30-40 Length of sequence, right-justified 41-41 space 42-43 'bp' 44-47 spaces 48-54 DNA, RNA, mRNA, rRNA, tRNA or cRNA, left justified 55-55 space 56-63 'linear' followed by two spaces, or 'circular' 64-64 space 65-67 The division code (see '3.1. Division categories') 68-68 space 69-79 Date, in the form dd-MMM-yyyy (e.g., 08-JUL-2002) ------------------------------------------------------------------------------ 2.2. DEFINITION line The definition briefly describes the information of gene(s). "DEFINITION" is constructed by each of the three data banks. 2.3. ACCESSION line This line shows accession number of the entry data. A unique accession number is issued to the data submitter by each of the three data banks. The accession number is composed of 1 alphabet character and 5 digits (ex. A12345) or 2 alphabet characters and 6 digits (ex. AB123456). The former style was used in 1980s, but later the latter style was introduced because of data explosion. All the entries designated by the accession numbers with the prefixes given below have been collected and processed by DDBJ, and the rest have been done by GenBank and EMBL-Bank/EBI. ------------------------------------------------------------------------------- C, D, E, AB, AG, AK, AP, AT, AU, AV, BA, BB, BD, BJ, BP, BS, BW, BY, CI, CJ, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, DL, DM, FS, FT, FU, FV, FW, FX, FY, FZ, GA, GB, HV ------------------------------------------------------------------------------- You can find the list of the prefixes of the accession numbers at the following URL; http://www.ddbj.nig.ac.jp/sub/prefix.html If multiple entries are united to an entry, or if an entry is extensively modified after the submission, the responsible data banks may assign a new accession number to it. In these cases, the new accession number is called the primary accession number, and the old accession number(s) is/are called the secondary accession number(s). In the flat file, the primary accession number is indicated first, then the secondary accession number(s) follows. You can find the same updated entry with both the primary and the secondary accession numbers. 2.4. VERSION line This line consists of an accession number and a version number, like "AB123456.1", in which the digit(s) after the period is a version number. The data open to public for the first time is version number as "1". The reason for adding VERSION is that since a released sequence sometimes revised by the submitter, the accession number alone cannot specify the sequence in question causing the user a trouble. The number is increased by one every time when a revised sequence is made public. 2.5. KEYWORDS line The data banks describe this line, if necessary. In many cases, the categories of the data (EST, HTG etc.), gene names and product names included in "KEYWORDS". 2.6. SOURCE line This line shows the scientific name (and a corresponding common name, if defined as "Genbank common name" in taxonomy database) on organism from which the sequence is obtained and an organelle type if the sequence is derived from an organelle other than the nucleus. 2.7. REFERENCE line The information on the submitters and references related to the submitted sequence is indicated in REFERENCE line. 2.8. COMMENT line. The information about an entry that cannot be described using FEATURES or the other fields. 2.9. FEATURES line Biological features of a submitted sequence data are described with "Feature" key (the biological nature of the annotated feature), "Location" (the region of the sequence which corresponds to Feature), and "Qualifier" (supplementary information about Feature). The "Feature" and "Qualifier" keys used in the present release is defined by DDBJ/EMBL/GenBank Feature Table: Definition Version 9.0 (Dec, 2010). The document is continuously updated every half year, in principle. You can find its newest version on URL; http://www.ddbj.nig.ac.jp/FT/full_index.html 2.10. BASE COUNT line In the BASE COUNT line of the DDBJ flat file, 9 digits are allocated for each number of a (adenine), c (cytosine), g(guanine) and t (thymine). In the case of RNA sequence, uracil is indicated as "t" according to the rule of the international nucleotide database. 2.11. ORIGIN line The sequence data starts from the next line of ORIGIN. The sequence is indicated as lower case letters, delimited by space per 10 bases, starts a new line by 60 bases. The numbers described at left side of lines mean the ordinal number of the top base of the line. 3. Division categories The present release is divided into 21 categories, called 'division', of organisms and others. The contents of the 21 divisions are shown in the following. See also '7. File categories' and '10. File list' below. HUM; human PRI; primates (other than human) ROD; rodents MAM; mammals (other than primates and rodents) VRT; vertebrates (other than mammals) INV; invertebrates (animals other than vertebrates) PLN; plants, fungi, plastids (eukaryotes other than animals) BCT; bacteria (including both Eubacteria and Archaea) VRL; viruses PHG; bacteriophages ENV; sequences obtained via environmental sampling methods SYN; synthetic constructs (artificially constructed sequences) EST; expressed sequence tags; short single pass cDNA sequences GSS; genome survey sequences; short single pass genomic sequences TSA; transcriptome shotgun assemblies HTC; high throughput cDNA sequences; The sequence submitted from cDNA sequencing projects except for EST. This division is to include unfinished high throughput cDNA sequences, each of which has 5'UTR and 3'UTR at both ends and part of a coding region. The sequence may also include introns. When the sequence becomes finished later, it moves to the corresponding taxonomic division. HTG; high throughput genomic sequences The sequence submitted mainly from genome sequencing projects which regarded a clone as a sequencing unit. STS; sequence tagged sites The tag site for genome sequencing. The information of chromosome, map, is mandatory for this division. PAT; sequence data related to patent applications The data those which the Japan Patent Office (JPO), United States Patent and Trademark Office (USPTO), the European Patent Office (EPO), and Korean Intellectual Property Office (KIPO) collected, processed and released. See also '3.1. Notice for patent related sequence data' below. UNA; the data not annotated The UNA division is not used for recently submitted sequences. CON; Contig / Constructed To conjugate a series of entries, such as those submitted from a genome project, each of the three data banks constructs an entry and assign an accession number to a large scale sequence dataset. Such entries are classified into the CON division. The entry in the CON division has the information of joined accession numbers instead of the sequence data. The corresponding entries of the CON entry have been submitted to other divisions. The entries and bases in the CON division are not counted in the released numbers given on the top of the release note. 3.1. Notice for patent related sequence data This release includes PAT division for patent related sequence data as described above. The data those which Japan Patent Office (JPO), United States Patent and Trademark Office (USPTO), European Patent Office (EPO), and Korean Intellectual Property Office (KIPO) collected, processed and released. Sequence data in patent claims to KIPO were properly processed and submitted to DDBJ by Byungwook Lee at Korean Bioinformation Center in collaboration with KIPO. The prefixes of accession numbers for the patent related sequence data are shown below; JPO : E, BD, DD, DJ, DL, DM, FU, FV, FW, FZ, GB, HV KIPO : DI USPTO: I, AR, DZ, EA, GC, GP, GV, GX, GY EPO : A, AX, CQ, CS, FB, GM, GN, HA, HB, HC, HD, HH, HI, JA Note also that unauthorized use of the patented data may cause legal issues for which DDBJ takes no responsibility. See also '6. Disclaimer'. 4. DDBJ staff This release is published by the following DDBJ staff. Jun Mashima, Hideo Aono, Yoshiyuki Ehara, Mayumi Ejima, Masato Endo, Masahiro Fujimoto, Daisuke Fukuda, Tatsukazu Hashimoto, Fumie Hirata, Nobuhiro Hoshi, Fumiyasu Ishikawa, Kazuya Kanno, Shingo Kawahara, Takahiro Kazama, Satoshi Kitadate, Yuichi Kodama, Junko Kohira, Takehide Kosuge, Fumiko Kubodera, Eisuke Kurihara, Kyungbum Lee, Mika Maki, Kimiko Mimura, Mieko Mochizuki, Takeshi Moriyama, Yoshihisa Munakata, Naoko Murakata, Sachiko Nagira, Masahiko Nagura, Asami Nozaki, Toshihisa Okido, Katsunaga Sakai, Masakazu Sano, Makoto Sato, Yukie Shinyama, Naoki Shiraishi, Rie Sugita, Kimiko Suzuki, Kazuya Takei, Haru Tsutsui, Koji Watanabe, Hiroaki Yamada, Naoto Yabuta, Emi Yokoyama, Takashi Gojobori, Eli Kaminuma, Osamu Ogasawara, Kosaku Okubo, Toshihisa Takagi and Yasukazu Nakamura Center for Information Biology and DNA Data Bank of Japan National Institute of Genetics Research Organization of Information and Systems Mishima 411-8540, Japan Phone: +81 55 981 6853 FAX: +81 55 981 6849 E-mail: ddbj@ddbj.nig.ac.jp (for general inquiry) ddbjsub@ddbj.nig.ac.jp (for data submission) ddbjupdt@ddbj.nig.ac.jp (for updates and notification of publication) WWW: http://www.ddbj.nig.ac.jp/ (for DDBJ WWW server) http://sakura.ddbj.nig.ac.jp/ (for DDBJ sequence data submission system) 5. Acknowledgment We are grateful to NCBI and EBI for a firm friendship and an excellent collaboration with us. We also thank JPO and KIPO for a steady cooperation with us. The operation of DDBJ is supported by the Ministry of Education, Culture, Sports, Science and Technology, and we would gratefully note this here. DDBJ uses the Super-SINET computer network for data collection, data exchange and various services. 6. Disclaimer While DDBJ endeavors to keep its data correct, DDBJ makes no representations or warranties of any kind about the completeness, accuracy or reliability with respect to the entries contained in the DDBJ periodical release. DDBJ also makes no legal liability or responsibility of merchantability or fitness for a particular purpose or that the use of the sequence data will not infringe any patent or other rights. Any receipt, reliance or use you place on such data is therefore strictly at your own risk. 7. File categories This release covers 21 categories (see also '3. Division categories'.) of organisms and others as follows: ------------------------------------------------------------------------------ ddbjbct; Category for bacteria ddbjcon; Category for CON (contigs) ddbjenv; Category for ENV (environmental samples) ddbjest; Category for EST (expressed sequence tags) ddbjgss; Category for GSS (genome survey sequences) ddbjhtc; Category for HTC (high throughput cDNA sequences) ddbjhtg; Category for HTG (high throughput genomic sequences) ddbjhum; Category for human ddbjinv; Category for invertebrates ddbjmam; Category for mammals other than primates and rodents ddbjpat; Category for patents ddbjphg; Category for phages ddbjpln; Category for plants ddbjpri; Category for primates other than human ddbjrod; Category for rodents ddbjsts; Category for STS (sequence tagged sites) ddbjsyn; Category for synthetic DNAs ddbjtsa; Category for TSA (transcriptome shotgun assemblies) ddbjuna; Category for unannotated sequences ddbjvrl; Category for viruses ddbjvrt; Category for vertebrates other than mammals ------------------------------------------------------------------------------ Some of above in the present release are recorded in multiple ddbj***###.seq files, each of which at most has 1.5 GB storage capacity as follows, respectively. --------------------- ddbjbct : 11 files ddbjenv : 7 files ddbjest : 153 files ddbjgss : 64 files ddbjhtc : 2 files ddbjhtg : 22 files ddbjhum : 6 files ddbjinv : 5 files ddbjmam : 2 files ddbjpat : 27 files ddbjpln : 9 files ddbjpri : 2 files ddbjrod : 5 files ddbjsts : 4 files ddbjtsa : 6 files ddbjvrl : 3 files ddbjvrt : 4 files ddbjcon : 23 files --------------------- The index files included in this release are ddbjacc#.idx, ddbjgen.idx, ddbjjou#.idx, and ddbjkey#.idx. See also '10. File list'. All of them except ddbjgen.idx are recorded in multiple ddbj***#.idx files, each of which at most has 1.5 GB storage capacity. 8. Sample of the contents in each file 8.1. Part of the contents in the file 'ddbjbct1.seq' This shows all pieces of information on one entry in DDBJ format. ------------------------------------------------------------------------------ LOCUS D87069 993 bp mRNA linear BCT 05-OCT-2006 DEFINITION Escherichia coli mRNA for RNA polymerase sigma subunit, truncated form of sigma-38, complete cds. ACCESSION D87069 VERSION D87069.1 KEYWORDS RNA polymerase sigma subunit, truncated form of sigma-38. SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 993) AUTHORS Jishage,M. TITLE Direct Submission JOURNAL Submitted (14-AUG-1996) to the DDBJ/EMBL/GenBank databases. Contact:Miki Jishage National Institute of Genetics, Molecular Genetics; Yata 1111, Mishima, Shizuoka 411, Japan REFERENCE 2 AUTHORS Jishage,M. and Ishihama,A. TITLE Variation in RNA polymerase sigma subunit composition within different stocks of Escherichia coli starin W3110 JOURNAL Unpublished (1996) REFERENCE 3 AUTHORS Ivanova,A., Renshaw,M., Guntaka,R. and Eisenstark,A. TITLE DNA base sequence variability in katF (putative sigma factor) gene Escherichia coli JOURNAL Nucleic Acids Res. 20, 5479-5480 (1992) REFERENCE 4 AUTHORS Takayanagi,Y., Tanaka,K. and Takahashi,H. TITLE Structure of the 5' upstream region and the regulation of the rpoS gene of Escherichia coli JOURNAL Mol. Gen. Genet. 243, 525-531 (1994) COMMENT FEATURES Location/Qualifiers source 1..993 /db_xref="taxon:562" /mol_type="mRNA" /organism="Escherichia coli" /strain="W3110" CDS 1..810 /note="the gene has four single base changes, resulting in two amino acid substitutions and an amber mutation" /product="RNA polymerase sigma subunit, truncated form of sigma-38" /protein_id="BAA13238.1" /transl_table=11 /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEYEPSDNDLAEEE LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAK" variation 75 /citation=[3] /replace="t" variation 97 /citation=[3] /replace="t" variation 99 /citation=[3] /replace="t" variation 808 /citation=[3] /replace="t" BASE COUNT 254 a 223 c 291 g 225 t ORIGIN 1 atgagtcaga atacgctgaa agttcatgat ttaaatgaag atgcggaatt tgatgagaac 61 ggagttgagg tttttgacga aaaggcctta gtagaatatg aacccagtga taacgatttg 121 gccgaagagg aactgttatc gcagggagcc acacagcgtg tgttggacgc gactcagctt 181 taccttggtg agattggtta ttcaccactg ttaacggccg aagaagaagt ttattttgcg 241 cgtcgcgcac tgcgtggaga tgtcgcctct cgccgccgga tgatcgagag taacttgcgt 301 ctggtggtaa aaattgcccg ccgttatggc aatcgtggtc tggcgttgct ggaccttatc 361 gaagagggca acctggggct gatccgcgcg gtagagaagt ttgacccgga acgtggtttc 421 cgcttctcaa catacgcaac ctggtggatt cgccagacga ttgaacgggc gattatgaac 481 caaacccgta ctattcgttt gccgattcac atcgtaaagg agctgaacgt ttacctgcga 541 accgcacgtg agttgtccca taagctggac catgaaccaa gtgcggaaga gatcgcagag 601 caactggata agccagttga tgacgtcagc cgtatgcttc gtcttaacga gcgcattacc 661 tcggtagaca ccccgctggg tggtgattcc gaaaaagcgt tgctggacat cctggccgat 721 gaaaaagaga acggtccgga agataccacg caagatgacg atatgaagca gagcatcgtc 781 aaatggctgt tcgagctgaa cgccaaatag cgtgaagtgc tggcacgtcg attcggtttg 841 ctggggtacg aagcggcaac actggaagat gtaggtcgtg aaattggcct cacccgtgaa 901 cgtgttcgcc agattcaggt tgaaggcctg cgccgtttgc gcgaaatcct gcaaacgcag 961 gggctgaata tcgaagcgct gttccgcgag taa // ------------------------------------------------------------------------------ 8.2. Part of the contents in the accession number index file 'ddbjacc1.idx' The following excerpt from the accession number index file illustrates the format of the index. ------------------------------------------------------------------------------ D00001 ECPBPA BCT X04516 D00002 ECPYRC BCT X04469 D00003 HUMP450M HUM D00003 D00004 FLBFLBL40 VRL D00004 D00005 IBAMEM682 VRL D00005 D00006 BACPNS1981 BCT D00006 D00007 CHKCALGRP VRT D00007 D00008 ECPNTAB BCT X04195 D00009 DROPER1 INV D00009 ------------------------------------------------------------------------------ 8.3. Part of the contents in the keyword phrase index file 'ddbjkey1.idx' Keyword phrases consist of names for gene products and other characteristics of sequence entries. ------------------------------------------------------------------------------ "COAT PROTEIN SMO511347 VRL AJ511347 'TNPA GENE UBA564903 BCT AJ564903 'ZINC-FINGER' MOTIF PRNS53 VRL X60546 (+) MATING TYPE SURFACE PROTEIN ABGPSSP PLN M94861 (1,3 TABETGLUB PLN Z22874 (1,3)-BETA-D-GLUCAN BINDING PROTEIN AJ606470 INV AJ606470 (1,3)BETA-GLUCAN SYNTHASE NCU09275 PLN U09275 (1,4)-BETA-D-ARABINOXYLAN ARABINOFURANOHYDROLASE ANAXHA PLN Z78011 ANTUAXHA PLN Z78010 (1,6)-BETA-GLUCAN BIOSYNTHESIS YSAKRE1A PLN M81588 (1-3)-BETA-GLUCANASE NTSP41AGN PLN X81560 PA13BGPT PLN X57794 (1-3,1-4)-BETA-D-GLUCANASE HVBDG PLN X52572 (1-4)-BETA-MANNAN ENDOHYDROLASE CAR278996 PLN AJ278996 CAR293305 PLN AJ293305 (2',5'-OLIGOISOADENYLATE SYNTHETASE-DEPENDENT) AL138776 HUM AL138776 (2'-5') OLIGO(A) SYNTHASE E16 SSO4G06 EST F14610 (2'-5')OLIGOADENYLATE SYNTHETASE HSA225089 HUM AJ225089 HUMSYN25A HUM D00068 SSA225090 MAM AJ225090 (6')-IB' AMINOGLYCOSIDE ACETYLTRANSFERASE AXY278514 BCT AJ278514 PAE291609 BCT AJ291609 (8,11)-LINOLEOYL DESATURASE COF245938 PLN AJ245938 ------------------------------------------------------------------------------ 8.4. Part of the contents in the journal citation index file 'ddbjjou1.idx' The journal citation index file lists all of the citations that appear in the references. ------------------------------------------------------------------------------ (ER) AAPS PHARMSCI. 4 (3), DOI 10.1208/PS040315 (2002) AY170916 ROD AY170916 (ER) AM. J. HUM. GENET. 76 (1) (2004) IN PRESS AY753209S1 HUM AY753209 AY753209S2 HUM AY753210 (ER) ARCH. VIROL. (2004) IN PRESS AF531505 VRL AF531505 AY518899 VRL AY518899 AY518900 VRL AY518900 AY518901 VRL AY518901 AY518902 VRL AY518902 AY518903 VRL AY518903 AY518904 VRL AY518904 AY518905 VRL AY518905 AY518906 VRL AY518906 AY518907 VRL AY518907 AY518908 VRL AY518908 AY518909 VRL AY518909 AY518910 VRL AY518910 AY518911 VRL AY518911 AY518912 VRL AY518912 AY518913 VRL AY518913 AY518914 VRL AY518914 AY518915 VRL AY518915 AY518916 VRL AY518916 AY518917 VRL AY518917 AY518918 VRL AY518918 AY518919 VRL AY518919 AY518920 VRL AY518920 AY518921 VRL AY518921 AY518922 VRL AY518922 AY518923 VRL AY518923 AY518924 VRL AY518924 AY518925 VRL AY518925 AY518926 VRL AY518926 AY518927 VRL AY518927 AY518928 VRL AY518928 AY518929 VRL AY518929 AY518930 VRL AY518930 AY518931 VRL AY518931 AY518932 VRL AY518932 AY521234 VRL AY521234 AY521235 VRL AY521235 AY521236 VRL AY521236 AY521237 VRL AY521237 AY521238 VRL AY521238 (ER) ARTERIOSCLER. THROMB. VASC. BIOL. (2004) IN PRESS AY563557 HUM AY563557 (ER) BIOCHEM. BIOPHYS. RES. COMMUN. 325 (1), 203-214 (2004) AY563137 HUM AY563137 (ER) BIOCHEM. J./10.1042/BJ20030293 HSA496460 HUM AJ496460 ------------------------------------------------------------------------------ 8.5. Part of the contents in the gene name index file 'ddbjgen.idx' This file lists all the gene names that appear in the feature table. ------------------------------------------------------------------------------ 'ARR BX927156 BCT BX927156 'BGLG BX927156 BCT BX927156 'BGLS BX927148 BCT BX927148 'BGLY' BX927156 BCT BX927156 'BRNQ AF305888 BCT AF305888 'COMK AL591983 BCT AL591983 AL596172 BCT AL596172 'CRCB BX927155 BCT BX927155 'CRTI BX927155 BCT BX927155 'DPPE LDDIPEP BCT Z34898 'FIC BX936398 BCT BX936398 ------------------------------------------------------------------------------ 9. Release history Release Date Entries Bases Comments 87 09/11 142,339,601 131,276,394,833 86 06/11 138,030,308 128,745,918,079 85 03/11 132,302,771 124,516,775,718 84 12/10 128,607,035 120,919,136,706 83 09/10 124,079,491 117,728,717,442 82 06/10 120,034,097 115,169,689,543 81 03/10 116,720,237 112,394,932,676 TPA excluded 80 12/09 112,314,250 109,636,862,252 SOURCE line modified 79 09/09 108,593,519 106,684,379,504 DBLINK line started PROJECT line terminated 78 06/09 105,737,359 104,597,360,291 77 03/09 102,099,156 101,765,388,414 76 12/08 98,220,409 98,741,908,446 75 09/08 92,840,037 95,219,505,205 TSA division started 74 06/08 87,903,140 91,294,770,939 73 03/08 83,167,582 86,099,950,395 KIPO inclusion started 72 12/07 79,004,098 82,592,245,487 Most of E-mail addresses discarded 71 09/07 76,273,345 79,706,204,461 70 06/07 72,801,679 76,788,510,646 69 03/07 67,523,680 71,775,679,500 PROJECT line started Indexes for categories terminated 68 12/06 64,267,978 68,259,314,742 1.5 GB storage started 67 09/06 61,144,621 65,443,024,193 66 06/06 58,176,628 62,945,843,881 65 03/06 55,890,995 60,564,721,635 TPA subcategories started 64 12/05 52,272,669 56,098,558,378 Some index files split 63 09/05 47,741,593 52,246,110,341 62 06/05 45,249,444 49,158,155,283 ENV division started Version for release note started 61 03/05 43,118,204 47,099,081,750 Changed style of release note 60 12/04 40,583,945 44,416,752,273 /db_xref="H-inv:**" started 59 09/04 37,926,117 42,245,956,937 58 06/04 34,917,581 39,812,635,108 57 03/04 32,693,678 38,008,449,840 56 12/03 30,405,173 36,079,046,032 55 09/03 27,753,140 34,280,225,489 54 06/03 25,149,821 32,162,041,177 53 02/03 23,250,813 29,711,299,332 52 12/02 20,354,812 26,931,456,316 51 09/02 18,401,358 22,782,404,136 TPA started 50 06/02 17,260,693 20,158,357,982 49 04/02 16,503,157 18,579,627,226 48 01/02 15,016,100 16,197,713,855 47 10/01 13,266,610 14,145,671,645 46 07/01 12,313,759 13,037,646,166 45 04/01 11,434,113 12,207,092,905 HTC division started 44 01/01 10,165,597 11,136,298,841 43 10/00 8,666,551 10,034,532,698 42 07/00 7,554,995 8,880,721,093 41 04/00 5,962,608 6,409,581,885 CON division started 40 01/00 5,388,125 4,762,696,173 RNA division terminated 39 10/99 4,810,773 3,728,000,562 NID and PID discarded 38 07/99 4,294,369 3,098,519,597 37 03/99 3,311,627 2,375,261,951 VERSION, /protein_id started 36 01/99 3,073,166 2,190,425,560 35 10/98 2,759,261 1,957,341,169 34 07/98 2,412,785 1,708,580,623 33 04/98 2,174,769 1,479,303,279 32 01/98 1,956,669 1,300,950,613 31 10/97 1,731,532 1,139,869,464 Adoption of the unified taxonomy database 30 07/97 1,534,115 992,788,339 NID and PID terminated 29 04/97 1,270,194 841,415,232 28 01/97 1,154,120 756,785,219 HTG division started ORG division terminated 27 10/96 936,697 608,103,057 GSS division started 26 07/96 835,552 551,932,448 25 04/96 744,490 499,300,364 /translation started 24 01/96 637,508 431,771,652 23 10/95 569,757 390,694,350 22 07/95 437,588 322,982,425 HUM division started 21 04/95 274,596 250,875,023 20 01/95 239,689 231,299,557 19 10/94 204,332 205,274,131 18 07/94 185,230 192,473,021 17 04/94 169,957 179,942,209 16 01/94 154,626 165,017,628 15 10/93 131,649 147,224,690 14 07/93 120,350 138,686,333 JPO inclusion started 13 04/93 112,067 129,784,445 12 01/93 97,683 120,815,244 EST division started 11 07/92 65,693 84,839,075 10 01/92 59,317 77,805,556 GenBank/EMBL inclusion started 9 07/91 1,130 2,002,124 8 01/91 879 1,573,442 7 07/90 681 1,154,211 6 01/90 496 841,236 5 07/89 395 679,378 4 01/89 302 535,985 3 07/88 230 345,850 2 01/88 142 199,392 1 07/87 66 108,970 Started with DDBJ only ------------------ Since release 81 ------------------ TPA category data have been excluded from DDBJ periodical release: Since September 2002 (DDBJ release 51), we provided DDBJ periodical releases including TPA category data. However, it is potentially confusing, because TPA category is not primary nucleotide sequence data. Therefore, DDBJ terminated to include TPA data. TPA data has been available from the other FTP site. See following site in detail. URL; http://www.ddbj.nig.ac.jp/whatsnew/whatsnew2009-e.html#090828 ------------------ Since release 80 ------------------ The format of the SOURCE line in DDBJ flat file has been changed: The SOURCE lines in some of DDBJ flat file included a common name like as GenBank flat file. The change is shown below ---------------- Old (-rel. 79) ---------------- Format: SOURCE [] Example: SOURCE Homo sapiens mitochondrion ---------------- New (rel. 80-) ---------------- Format: SOURCE [] [()] Example: SOURCE mitochondrion Homo sapiens (human) See also '2. DDBJ flat file format'. ------------------ Since release 79 ------------------ A new line, DBLINK, has replaced PROJECT line: Following the agreement at the INSD collaborative meeting in 2008, the scope of the project ID has expanded to include projects that are not necessarily targeted to the sequencing of a complete genome. In addition, there are other resources such as the Trace Assembly Archive at the NCBI and the like. Therefore, we have decided to replace the PROJECT line by a new line format, "DBLINK". The replacement is illustrated in the following; From the use of the PROJECT line (-release 78); ------------------------------------------------------------------------------- LOCUS AP000000 4700000 bp DNA circular BCT 27-FEB-2009 DEFINITION Escherichia coli DDBJ genomic DNA, complete genome. ACCESSION AP000000 VERSION AP000000.1 PROJECT GenomeProject:99999 KEYWORDS . ------------------------------------------------------------------------------- To the DBLINK line format (release 79-); ------------------------------------------------------------------------------- LOCUS AP000000 4700000 bp DNA circular BCT 27-FEB-2009 DEFINITION Escherichia coli DDBJ genomic DNA, complete genome. ACCESSION AP000000 VERSION AP000000.1 DBLINK Project:99999 KEYWORDS . ------------------------------------------------------------------------------- ------------------ Since release 75 ------------------ A new division for assembled mRNA sequences, Transcriptome Shotgun Assembly (TSA), has been included since the release 75. With new sequencing technologies in use, INSDC have faced many requests to accept assembled EST sequences. These sequence data have become more useful than used to be, although they may not be correctly assembled or exist in nature. Therefore, INSDC decided to collect assembled EST sequences and classified them into the new division 'TSA'. TSA sequences are shotgun assemblies of primary sequences deposited in the EST division of INSDC, race Archive (TA) or Short-Read Archive (SRA). Two specific keywords, "TSA" and "Transcriptome Shotgun Assembly", are present in all TSA entries. The new division code, "TSA", is also described in the the LOCUS line in all TSA entries. No format changes in the flat file are anticipated for the TSA division, however, note that TSA entries make use of the same PRIMARY line that is described for the entries in TPA category. The PRIMARY block contains references to the underlying reads/transcripts that are assembled to construct a TSA record. Note that it is required for a TSA submission to submit sequence data of primary transcripts to the EST division of INSDC, TA, or SRA. More information about how to submit a TSA entry is provided via the following URL; http://www.ddbj.nig.ac.jp/sub/tsa-e.html ------------------ Since release 73 ------------------ Introduction of the sequence data from the Korean Intellectual Property Office: The nucleotide sequence data transferred from Korean Intellectual Property Office (KIPO) have been included in DDBJ release. See also, '3. Division categories' and '3.1. Notice for patent related sequence data'. ------------------ Since release 72 ------------------ Deletion of E-mail address, phone and fax numbers from DDBJ flat file: To follow the Japanese law of protecting personal information, DDBJ deleted both phone and fax numbers, and E-mail address from the flat files of the entries submitted to DDBJ. It would be also helpful to protect DDBJ releases against SPAM mail senders. DDBJ retrofitted most of all entries submitted to DDBJ, not to GenBank or EMBL, by the DDBJ periodical release 72. Previously, the submitter information was described in JOURNAL line at REFERENCE 1 as, -------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Taro Mishima, DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan (E-mail:ddbj@ddbj.nig.ac.jp, URL:http://www.ddbj.nig.ac.jp/, Tel:81-12-345-6789, Fax:81-12-345-9876) -------------------------------------------------------------------------------- After the deletion or the information in question, DDBJ flat file is either one of the following two types; Type 1: Phone and fax numbers and E-mail address are deleted. -------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Contact:Taro Mishima DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan URL :http://www.ddbj.nig.ac.jp/ ------------------------------------------------------------------------------- Type 2: When the submitters wish to keep their contact information disclosed, it is described as, ------------------------------------------------------------------------------- REFERENCE 1 (bases 1 to 1200) AUTHORS Mishima,T. TITLE Direct Submission JOURNAL Submitted (01-Jan-1990) to the DDBJ/EMBL/GenBank databases. Contact:Taro Mishima DNA Data Bank of Japan, National Institute of Genetics; 1111, Yata, Mishima, Shizuoka 411-8540, Japan URL :http://www.ddbj.nig.ac.jp/ E-mail :ddbj@ddbj.nig.ac.jp Phone :81-12-345-6789 Fax :81-12-345-9876 ------------------------------------------------------------------------------- ------------------ Since release 69 ------------------ Introduction of the project ID at PROJECT line in DDBJ flat file: Following the agreement at the INSD collaborative meeting in 2006, INSDC has started to assign the project ID for submissions from sequencing projects. The description of project ID is shown as below; ---------------------------------------------------------------------------- A unique identifier, assigned at the time of the submission by a sequencing project that informed INSDC of the submission beforehand. It is recommended that the submitter quotes the assigned project ID in all communication with INSDC databases to allow for easier and faster tracking of issues. The project ID field provides an umbrella identifier that points to all related sequence data for the project. ---------------------------------------------------------------------------- The PROJECT lines contain INSDC-assigned ID for the sequencing project. It will be appeared between VERSION and KEYWORDS lines in DDBJ flat files, from the DDBJ periodical release, 69 as shown below. See also '2. DDBJ flat file format'. ---------------------------------------------------------------------------- ACCESSION AB012345 VERSION AB012345.1 PROJECT GenomeProject:123 KEYWORDS . ---------------------------------------------------------------------------- Termination of providing the index files for each category: ------------------ Since release 68 ------------------ Split of files: We changed the maximum file size from 300 MB to 1.5 GB, because the network capacity has been remarkably increased. Each file named as ddbj***##.seq has at most 1.5 GB storage capacity. See also the sections, '7. File categories' and '10. File list'. ------------------ Since release 64 ------------------ Split of index files: In the present release, some of index files (ddbjacc.idx, ddbjjou.idx, and ddbjkey.idx) have been greater than 2 GB in the file size. So, these have been recorded in multiple ddbj****.idx files, each of which at most has 1.5 GB storage capacity as follows, respectively. See also 7., 8.2., 8.3., 8.4. and 10. ------------------ Since release 62 ------------------ Release version number is introduced: DDBJ has started to include the item, 'version', for its release note, which indicates a version for its periodical release. It is expressed like '62.0', in which the digit(s) after the period is a version number. The reason for adding the version number is that a released data is sometimes revised due to urgent and necessary corrections. The number is increased by one every time when a revised periodical release is made public until the next release. Introduction of ENV division: Recently, the submissions of the sequences derived from environmental samples have rapidly increased. To accommodate such submissions, a new division, ENV, has been created (See also '3.1. Division categories'). This division contains the sequences obtained via direct molecular isolation such as PCR, DGGE, or any anonymous method. In the past, the sequences derived from environmental samples belonged to taxonomic divisions, mainly BCT. At DDBJ, the retrofit to transfer relevant entries from taxonomic divisions to the ENV division starts in the present release, and ends by the next periodical release. Please note that during this transitional period, some entries to be eventually placed in the ENV division will be found in other divisions. Strand information is removed: The strand information of LOCUS line in the flat file has been removed as shown below. See also '2.1. LOCUS line'. ---------------------------------------------------------------------------- Old (-rel. 61): 44-44 space 45-47 spaces, ss- (single-stranded), ds- (double-stranded), or ms- (mixed-stranded) New (rel. 62-): 44-47 spaces ---------------------------------------------------------------------------- ------------------ Since release 61 ------------------ The style of release note (this file) has been changed. Some entries have the sequential format for the secondary accession numbers in the ACCESSION line, in order to make the expression of secondary accession numbers in the past short. For example; ------------------------------------------------------------------------------ Before; ACCESSION AB000802 D85885 D85886 D85887 After; ACCESSION AB000802 D85885-D85887 ------------------------------------------------------------------------------ See also '2.3. ACCESSION line'. ------------------ Since release 60 ------------------ The cross-reference to the H-invitational has been included. ------------------ Since release 56 ------------------ The three data banks have agreed that the maximum length limitation (350 kb) of a submitted sequence be relaxed. The BASE COUNT line of the DDBJ flat file format has been changed, corresponding to the relaxation of the maximum sequence length restriction in the entry that had been practiced at DDBJ/EMBL/GenBank International Nucleotide Sequence Databases. In the BASE COUNT line of the DDBJ flat file, 6 digits had been allocated for each number of a, c, g, t and other bases in the sequence. Hereafter, in the new flat file format, 9 digits are allocated for each number of a, c, g and t, while the numbers of other bases are removed. In accordance with the relaxation of sequence length limitation, GenBank had already dropped the BASE COUNT line from their flat file format from GenBank Release 138 (Oct. 2003). We DDBJ have decided to maintain the BASE COUNT line in our flat file format from the view that GC contents are still important information to characterize the sequence. The changes in the BASE COUNT line are shown below. ---------------------------------------------------------------------------- Old (-rel. 55): 1 6 11 16 21 26 31 36 41 46 51 56 61 66 71 |----|----|----|----|----|----|----|----|----|----|----|----|----|----| BASE COUNT 123456 a 123456 c 123456 g 123456 t 123456 others New (rel. 56-): 1 6 11 16 21 26 31 36 41 46 51 56 61 66 71 |----|----|----|----|----|----|----|----|----|----|----|----|----|----| BASE COUNT 123456789 a 123456789 c 123456789 g 123456789 t ---------------------------------------------------------------------------- ------------------ Since release 54 ------------------ '/sequenced_mol' qualifier has been changed to '/mol_type' qualifier. We accordingly completed retrofitting the pertinent entries. This change was made on the agreement at the INSD collaborative meeting in 2002. ------------------ Since release 51 ------------------ The format of LOCUS line in the flat file has been changed as shown below to adjust to the GenBank format. ------------------------------------------------------------------------------ Old (-rel. 50): LOCUS AB000001 660 bp DNA PLN 01-FEB-2001 New (rel. 51-): LOCUS AB000001 660 bp DNA linear PLN 01-FEB-2001 ------------------------------------------------------------------------------ ------------------ Since release 45 ------------------ The HTC (High Throughput cDNA) division has been included. This is to include unfinished high throughput cDNA sequences, each of which has 5'UTR and 3'UTR at both ends and part of a coding region. The sequence may also include introns. When the sequence becomes finished later, it moves to the corresponding taxonomic division. The sequence is accompanied with a keyword, HTC (High Throughput cDNA), which is dropped when the sequence is finished and moved to a taxonomic division. ------------------ Since release 41 ------------------ The CON division has been included. This division is to show the order of related sequences in a genome, and expressed by join and the accession numbers of the sequences. The contents of the CON division are compiled by the three data banks not by the data submitter. ------------------ Since release 40 ------------------ The RNA division was terminated. ------------------ Since release 37 ------------------ The three data banks include the item VERSION in the flat file, which indicates a version of a submitted nucleotide sequence. It is expressed like AB123456.1, in which the digit(s) after the period is a version number. The reason for adding VERSION is that since a released sequence sometimes revised by the submitter, the accession number alone cannot specify the sequence in question causing the user a trouble. The number is increased by one every time when a revised sequence is made public. Accordingly, the translated protein sequence will be accompanied with a /protein_id which is expressed as BAA12345.1, in which the digit(s) after the period is again a version number. The number is increased by one when the corresponding nucleotide sequence is revised and the protein sequence is changed as a result, and when the revised protein sequence is made public. ------------------ Since release 31 ------------------ We have started adopting the unified taxonomy database to unify the biological source of the sequence. The database is made up with scientific names, ID of unidentified organisms, and synthetic constructs etc. ------------------ Since release 30 ------------------ NID and PID were terminated. This change was made on the agreement at the INSD collaborative meeting in 1999. ------------------ Since release 28 ------------------ The HTG (High Throughput Genomic sequence) has been included. We terminated the ORG (Organelle) division. ------------------ Since release 27 ------------------ The GSS division has been included. GSS stands for Genome Survey Sequence, which is similar to EST, except that GSS is genomic DNA whereas EST is cDNA. ------------------ Since release 25 ------------------ DDBJ release contains amino acid sequences that were translated from the corresponding nucleotide sequences of the database. ------------------ Since release 22 ------------------ The HUM division has been included. We have the human (HUM) division solely for human sequences and the primate (PRI) division for non-human primate sequences. ------------------ Since release 12 ------------------ The EST (Expressed Sequence Tag) division has been included. ------------------ Since release 10 ------------------ The sequences submitted to GenBank or EMBL have been included in the release. 10. File list The files in this release are arranged in the following order with non-labeled format. ----------------------------------------------------------------------- file name file size ----------------------------------------------------------------------- ddbjrel.txt (DDBJ release note) 76750 ddbjacc1.idx (Accession number index file 1) 1499999996 ddbjacc2.idx (Accession number index file 2) 1500000019 ddbjacc3.idx (Accession number index file 3) 1500000032 ddbjacc4.idx (Accession number index file 4) 1053947562 ddbjgen.idx (Gene name index file) 244854094 ddbjjou1.idx (Journal citation index file 1) 1499999871 ddbjjou2.idx (Journal citation index file 2) 1489726260 ddbjjou3.idx (Journal citation index file 3) 1460007060 ddbjjou4.idx (Journal citation index file 4) 1410178956 ddbjjou5.idx (Journal citation index file 5) 346044790 ddbjkey1.idx (Keyword phrase index file 1) 1499999963 ddbjkey2.idx (Keyword phrase index file 2) 1499999980 ddbjkey3.idx (Keyword phrase index file 3) 1499999943 ddbjkey4.idx (Keyword phrase index file 4) 1090130112 ----------------------------------------------------------------------- file name number of entries number of bases file size ----------------------------------------------------------------------- ddbjbct1.seq 136711 611838679 1509135574 ddbjbct2.seq 96543 650141282 1502104687 ddbjbct3.seq 469 680706908 1508369409 ddbjbct4.seq 341 668657311 1506846320 ddbjbct5.seq 377 661923782 1502058312 ddbjbct6.seq 552 668638025 1514467821 ddbjbct7.seq 370 660242224 1505720654 ddbjbct8.seq 378 655978264 1506651127 ddbjbct9.seq 596 651274305 1499888071 ddbjbct10.seq 265508 546865671 1505446157 ddbjbct11.seq 238216 575914563 1471015858 ddbjenv1.seq 557254 421677258 1499001665 ddbjenv2.seq 570474 397749314 1499001597 ddbjenv3.seq 500739 441656375 1499001343 ddbjenv4.seq 667874 282866494 1499001727 ddbjenv5.seq 611305 388163253 1499001090 ddbjenv6.seq 544507 411287336 1499002967 ddbjenv7.seq 350519 212935627 868923679 ddbjest1.seq 460405 172262944 1499000954 ddbjest2.seq 488223 191102167 1499001822 ddbjest3.seq 495431 204823011 1499005061 ddbjest4.seq 476916 203126269 1499000823 ddbjest5.seq 547030 288665150 1499000779 ddbjest6.seq 548209 338101151 1498999933 ddbjest7.seq 536476 306070831 1499000704 ddbjest8.seq 409506 134472473 1499001360 ddbjest9.seq 483946 206328757 1499000613 ddbjest10.seq 511563 237301502 1499003605 ddbjest11.seq 468202 199737438 1499002834 ddbjest12.seq 375166 134708230 1499000426 ddbjest13.seq 274272 83781870 1499003451 ddbjest14.seq 274309 107327898 1499004622 ddbjest15.seq 376900 175739593 1499000365 ddbjest16.seq 479934 245036476 1499002418 ddbjest17.seq 460334 245019694 1499001590 ddbjest18.seq 451936 245611331 1499002395 ddbjest19.seq 462153 225485509 1499001626 ddbjest20.seq 462450 274001031 1499001780 ddbjest21.seq 465819 291276244 1499003166 ddbjest22.seq 468671 240969719 1499001691 ddbjest23.seq 445507 261874745 1499002340 ddbjest24.seq 497106 275671671 1499000359 ddbjest25.seq 549827 319741927 1499002379 ddbjest26.seq 425357 215668452 1499003219 ddbjest27.seq 430693 253197228 1499000838 ddbjest28.seq 474874 268595024 1499001074 ddbjest29.seq 515031 265787967 1499000181 ddbjest30.seq 453128 241029844 1499003358 ddbjest31.seq 454359 252528658 1499002858 ddbjest32.seq 439663 279986079 1499001758 ddbjest33.seq 410693 296543156 1499003926 ddbjest34.seq 477979 285226065 1499001072 ddbjest35.seq 647228 373721137 1499002360 ddbjest36.seq 477547 296283589 1499001624 ddbjest37.seq 428567 262865366 1499002670 ddbjest38.seq 258265 97500642 1499001566 ddbjest39.seq 259335 103776076 1499002483 ddbjest40.seq 295963 140271323 1499001994 ddbjest41.seq 480252 267817525 1499001624 ddbjest42.seq 467317 263774889 1499002162 ddbjest43.seq 454249 237415433 1499003110 ddbjest44.seq 470046 277430874 1499000908 ddbjest45.seq 518422 268429784 1499001671 ddbjest46.seq 427211 250079780 1499000328 ddbjest47.seq 552551 282008345 1499002099 ddbjest48.seq 439895 253152015 1499005815 ddbjest49.seq 409976 240277368 1499005072 ddbjest50.seq 262460 135853631 1499003760 ddbjest51.seq 267679 110346133 1499001234 ddbjest52.seq 300516 130872980 1499001886 ddbjest53.seq 396526 215844742 1499002119 ddbjest54.seq 556233 321047604 1499001121 ddbjest55.seq 430966 287283890 1499000657 ddbjest56.seq 446145 240154022 1499001553 ddbjest57.seq 475061 284112065 1499000515 ddbjest58.seq 415920 228697894 1499001963 ddbjest59.seq 483919 273395062 1499001754 ddbjest60.seq 451857 268474742 1498999993 ddbjest61.seq 422895 244387651 1499001577 ddbjest62.seq 476118 323164408 1499001811 ddbjest63.seq 466150 284984215 1499001484 ddbjest64.seq 444620 231068773 1499002112 ddbjest65.seq 442436 264877765 1499002428 ddbjest66.seq 432374 276184935 1499002045 ddbjest67.seq 394877 254458185 1499000042 ddbjest68.seq 420410 242832871 1499002408 ddbjest69.seq 426754 238382765 1499001596 ddbjest70.seq 426595 236386244 1499003011 ddbjest71.seq 435592 235704652 1499003114 ddbjest72.seq 478287 266780081 1498999947 ddbjest73.seq 541455 335821847 1499001692 ddbjest74.seq 556603 347982503 1499002380 ddbjest75.seq 495853 311553055 1499000353 ddbjest76.seq 497213 293123295 1499010641 ddbjest77.seq 390520 289736243 1499000860 ddbjest78.seq 487700 295260301 1499001745 ddbjest79.seq 379597 272618316 1499004015 ddbjest80.seq 392173 263400683 1499002550 ddbjest81.seq 369712 258017212 1499000259 ddbjest82.seq 414189 327018817 1499003605 ddbjest83.seq 461078 293571931 1499001172 ddbjest84.seq 465930 315670534 1499002222 ddbjest85.seq 529086 295339424 1499000036 ddbjest86.seq 518100 211351144 1499002296 ddbjest87.seq 526399 296496900 1499000732 ddbjest88.seq 474779 323588285 1499001527 ddbjest89.seq 523304 302060602 1499000860 ddbjest90.seq 653108 323749310 1499001140 ddbjest91.seq 599907 259844959 1498999926 ddbjest92.seq 468199 288404776 1499001830 ddbjest93.seq 514114 318392593 1499000200 ddbjest94.seq 559976 183514768 1499001661 ddbjest95.seq 519607 321288486 1499002247 ddbjest96.seq 502281 277626084 1499003046 ddbjest97.seq 387848 258969160 1499000298 ddbjest98.seq 656561 136731644 1499003697 ddbjest99.seq 455170 296657600 1499001074 ddbjest100.seq 583262 223783640 1499000048 ddbjest101.seq 503055 296877770 1499000115 ddbjest102.seq 497770 320260888 1499000758 ddbjest103.seq 531784 268225255 1499000309 ddbjest104.seq 577873 218136480 1499001252 ddbjest105.seq 487229 301529850 1498999964 ddbjest106.seq 416361 276535265 1499001548 ddbjest107.seq 483638 285109496 1499002477 ddbjest108.seq 443611 294706821 1499000995 ddbjest109.seq 487226 366580575 1499002503 ddbjest110.seq 421492 258719368 1499002517 ddbjest111.seq 403366 272508995 1499000274 ddbjest112.seq 460566 277902065 1499000036 ddbjest113.seq 445448 282590701 1499001271 ddbjest114.seq 446204 275008922 1499001009 ddbjest115.seq 373451 212393443 1499000079 ddbjest116.seq 379013 241715949 1499002381 ddbjest117.seq 536705 250916500 1499000844 ddbjest118.seq 441583 273917220 1499001718 ddbjest119.seq 450550 291746273 1499000612 ddbjest120.seq 488560 303084933 1499002183 ddbjest121.seq 298698 175079778 1499002912 ddbjest122.seq 421675 156646745 1499001610 ddbjest123.seq 532183 244452792 1499002079 ddbjest124.seq 600107 305284963 1499000753 ddbjest125.seq 426592 264814238 1499002922 ddbjest126.seq 581814 277241735 1499000012 ddbjest127.seq 523558 296858435 1499001086 ddbjest128.seq 501442 369564539 1499002804 ddbjest129.seq 543199 311444954 1499000544 ddbjest130.seq 521166 320321499 1499001074 ddbjest131.seq 584069 402952467 1499002215 ddbjest132.seq 499722 177289868 1499001999 ddbjest133.seq 451060 72633087 1499001641 ddbjest134.seq 462010 206614552 1499000059 ddbjest135.seq 471828 307838209 1499001767 ddbjest136.seq 417009 281890835 1499000223 ddbjest137.seq 478862 284694192 1499001175 ddbjest138.seq 465441 214465096 1499002278 ddbjest139.seq 471833 282961080 1499001191 ddbjest140.seq 435003 297450556 1499000216 ddbjest141.seq 463189 270001059 1499000915 ddbjest142.seq 476546 286035212 1499000397 ddbjest143.seq 321885 217062611 1499001902 ddbjest144.seq 377941 225199828 1499002401 ddbjest145.seq 428437 260894254 1499002020 ddbjest146.seq 459265 275168440 1499001357 ddbjest147.seq 477934 245941276 1499001125 ddbjest148.seq 463772 287781505 1499002746 ddbjest149.seq 537699 228880348 1499001201 ddbjest150.seq 563865 306040600 1499001988 ddbjest151.seq 459621 301545368 1499000087 ddbjest152.seq 495446 195106563 1499001141 ddbjest153.seq 11798 3616999 33683477 ddbjgss1.seq 478663 345523091 1499000405 ddbjgss2.seq 445935 341945573 1499001630 ddbjgss3.seq 444296 333587422 1499001263 ddbjgss4.seq 564360 274536015 1499001448 ddbjgss5.seq 489501 254982934 1499000017 ddbjgss6.seq 466713 256030192 1499000244 ddbjgss7.seq 392614 194653816 1499002038 ddbjgss8.seq 428895 213185434 1499001652 ddbjgss9.seq 489631 268261666 1499000505 ddbjgss10.seq 544371 304478608 1499002079 ddbjgss11.seq 512680 319838757 1499002912 ddbjgss12.seq 545162 351007502 1499001744 ddbjgss13.seq 499300 356567862 1499000445 ddbjgss14.seq 515101 357151197 1499000693 ddbjgss15.seq 603960 340502404 1499002091 ddbjgss16.seq 607023 367295720 1499000207 ddbjgss17.seq 563666 322346243 1499001928 ddbjgss18.seq 523011 372087345 1499002424 ddbjgss19.seq 511467 338963437 1499002536 ddbjgss20.seq 576472 368832594 1499000710 ddbjgss21.seq 577664 410870593 1499001331 ddbjgss22.seq 539905 326087750 1499001975 ddbjgss23.seq 479941 284196066 1499002398 ddbjgss24.seq 516961 336091089 1499002268 ddbjgss25.seq 532246 345221780 1499000973 ddbjgss26.seq 534806 348477927 1499002190 ddbjgss27.seq 590729 293188990 1499000512 ddbjgss28.seq 578939 290276206 1499002595 ddbjgss29.seq 555988 318281282 1499000694 ddbjgss30.seq 465486 385372729 1499002821 ddbjgss31.seq 477375 344610599 1499001270 ddbjgss32.seq 522839 372634572 1499002171 ddbjgss33.seq 598767 346268477 1499000651 ddbjgss34.seq 449515 331857345 1498999953 ddbjgss35.seq 521958 358947536 1499001767 ddbjgss36.seq 515121 244586276 1499002442 ddbjgss37.seq 572588 300049495 1499002129 ddbjgss38.seq 422964 306210427 1499003060 ddbjgss39.seq 409636 336777853 1499002004 ddbjgss40.seq 423289 347192582 1499003208 ddbjgss41.seq 415512 330992844 1499001802 ddbjgss42.seq 423200 345158125 1499002715 ddbjgss43.seq 421300 347778689 1499002810 ddbjgss44.seq 412086 331485708 1499001635 ddbjgss45.seq 513087 344404107 1499001084 ddbjgss46.seq 539673 339722152 1498999979 ddbjgss47.seq 596970 401245158 1499001112 ddbjgss48.seq 587779 413008236 1498999993 ddbjgss49.seq 478801 331959299 1499001261 ddbjgss50.seq 505965 301052734 1499001284 ddbjgss51.seq 526683 318674740 1499000392 ddbjgss52.seq 524738 365029229 1499000073 ddbjgss53.seq 533591 406231808 1499000908 ddbjgss54.seq 592749 315047706 1499001014 ddbjgss55.seq 520549 405819044 1499001506 ddbjgss56.seq 540790 341744234 1499000500 ddbjgss57.seq 542238 336721667 1499000990 ddbjgss58.seq 477637 378451453 1499001899 ddbjgss59.seq 493901 443568933 1499002099 ddbjgss60.seq 508963 433220050 1499002270 ddbjgss61.seq 544491 305367387 1499001625 ddbjgss62.seq 751903 134465660 1499001235 ddbjgss63.seq 624342 185401289 1499002011 ddbjgss64.seq 12655 5235638 33258070 ddbjhtc1.seq 273996 358282844 1499002339 ddbjhtc2.seq 259778 250330478 941351190 ddbjhtg1.seq 11401 1118110528 1499022921 ddbjhtg2.seq 7563 1118342964 1499135250 ddbjhtg3.seq 5920 1130695001 1499222029 ddbjhtg4.seq 5457 1140407374 1499222598 ddbjhtg5.seq 5349 1143907188 1499096561 ddbjhtg6.seq 5358 1144304522 1499274228 ddbjhtg7.seq 6593 1132401544 1499133638 ddbjhtg8.seq 6859 1143186218 1499140798 ddbjhtg9.seq 6254 1139384752 1499220498 ddbjhtg10.seq 6341 1133191724 1499017794 ddbjhtg11.seq 7041 1122960714 1499081203 ddbjhtg12.seq 6999 1125924675 1499175368 ddbjhtg13.seq 6938 1141276151 1499050117 ddbjhtg14.seq 6970 1135056270 1499124692 ddbjhtg15.seq 6756 1141158691 1499036991 ddbjhtg16.seq 6296 1138698537 1499259135 ddbjhtg17.seq 6691 1139882881 1499064605 ddbjhtg18.seq 7938 1145711575 1499014439 ddbjhtg19.seq 6774 1140278838 1499086589 ddbjhtg20.seq 6569 1156194495 1499185876 ddbjhtg21.seq 6511 1159265385 1499094649 ddbjhtg22.seq 3138 464110385 606018408 ddbjhum1.seq 31726 1043820737 1499121038 ddbjhum2.seq 8098 1069208243 1499184038 ddbjhum3.seq 145871 828852419 1499196786 ddbjhum4.seq 22561 1073303413 1499277796 ddbjhum5.seq 215908 611039005 1499091182 ddbjhum6.seq 120736 213185291 558518922 ddbjinv1.seq 256129 672111690 1499206388 ddbjinv2.seq 442072 435701793 1499003218 ddbjinv3.seq 218286 692705032 1503316126 ddbjinv4.seq 380191 430797812 1499001233 ddbjinv5.seq 351781 314272538 1353189992 ddbjmam1.seq 235399 769662980 1499000143 ddbjmam2.seq 52470 41271940 172370165 ddbjpat1.seq 1053905 509565505 1499300612 ddbjpat2.seq 752500 502040601 1499000097 ddbjpat3.seq 714447 342596843 1499000983 ddbjpat4.seq 714569 585311520 1499000984 ddbjpat5.seq 712730 403344491 1499001351 ddbjpat6.seq 728295 304410574 1499000870 ddbjpat7.seq 682536 351529991 1499285169 ddbjpat8.seq 697150 525830186 1499000364 ddbjpat9.seq 910243 548527398 1499000963 ddbjpat10.seq 646483 470600770 1499001742 ddbjpat11.seq 633681 366647905 1499000070 ddbjpat12.seq 560946 536016073 1499901198 ddbjpat13.seq 599074 398334171 1499001520 ddbjpat14.seq 546299 514142147 1499000513 ddbjpat15.seq 1009967 28387370 1499000402 ddbjpat16.seq 1028710 19545490 1499000217 ddbjpat17.seq 977496 443859762 1499133844 ddbjpat18.seq 1086860 333662309 1499002717 ddbjpat19.seq 864541 588288406 1499001935 ddbjpat20.seq 1392950 350676868 1499001955 ddbjpat21.seq 624861 791400943 1499014259 ddbjpat22.seq 955970 499000860 1499000964 ddbjpat23.seq 989912 356921439 1499002086 ddbjpat24.seq 806009 440495837 1499000334 ddbjpat25.seq 1447203 27496857 1499000793 ddbjpat26.seq 860626 444988947 1499002007 ddbjpat27.seq 582514 470807120 1328596634 ddbjphg.seq 6238 62809890 153288991 ddbjpln1.seq 100585 967381441 1499011708 ddbjpln2.seq 282235 513520728 1499000361 ddbjpln3.seq 95465 852873398 1499137275 ddbjpln4.seq 301903 619201767 1499336212 ddbjpln5.seq 236241 573637982 1499001048 ddbjpln6.seq 503473 405204399 1499000003 ddbjpln7.seq 147715 850063247 1499003580 ddbjpln8.seq 447492 440490305 1499005573 ddbjpln9.seq 14274 30562371 79095983 ddbjpri1.seq 33683 1098588481 1499221875 ddbjpri2.seq 64919 185783341 371397763 ddbjrod1.seq 36864 1015111527 1499179296 ddbjrod2.seq 5896 1092668689 1499141206 ddbjrod3.seq 13043 1096771612 1499002739 ddbjrod4.seq 105750 840943468 1499034989 ddbjrod5.seq 260493 352755588 918789350 ddbjsts1.seq 416139 209921210 1499004565 ddbjsts2.seq 337700 238081739 1499002445 ddbjsts3.seq 563381 186358750 1499000620 ddbjsts4.seq 4775 1510337 9811654 ddbjsyn.seq 100025 156239764 544044472 ddbjtsa1.seq 654597 267767398 1499001661 ddbjtsa2.seq 599518 322869194 1499001517 ddbjtsa3.seq 571978 345212032 1499000170 ddbjtsa4.seq 528590 369431402 1499000169 ddbjtsa5.seq 589016 369985696 1499001716 ddbjtsa6.seq 221267 221550498 669125562 ddbjuna.seq 304 489037 1426928 ddbjvrl1.seq 385399 406960904 1499000996 ddbjvrl2.seq 358111 423580611 1499000136 ddbjvrl3.seq 309764 354927211 1280239345 ddbjvrt1.seq 244117 693996530 1499005350 ddbjvrt2.seq 68491 981562346 1499129136 ddbjvrt3.seq 270568 711647866 1499002088 ddbjvrt4.seq 279363 322512993 1037364458 ------------------------------------------------------------------------------ Total 142339601 131276394833 484698507444 ddbjcon1.seq 102221 0 1499001857 ddbjcon2.seq 94028 0 1504745272 ddbjcon3.seq 276546 0 1499238408 ddbjcon4.seq 441261 0 1499002270 ddbjcon5.seq 302739 0 1501199982 ddbjcon6.seq 259787 0 1499001613 ddbjcon7.seq 268120 0 1499004162 ddbjcon8.seq 267629 0 1499003674 ddbjcon9.seq 278972 0 1499004497 ddbjcon10.seq 322005 0 1499003452 ddbjcon11.seq 309361 0 1499003669 ddbjcon12.seq 278499 0 1499004463 ddbjcon13.seq 289471 0 1499003772 ddbjcon14.seq 291004 0 1499000036 ddbjcon15.seq 247480 0 1499004978 ddbjcon16.seq 242645 0 1499002216 ddbjcon17.seq 538885 0 1499000981 ddbjcon18.seq 449670 0 1499000926 ddbjcon19.seq 402021 0 1499000948 ddbjcon20.seq 345533 0 1499024690 ddbjcon21.seq 126695 0 1499002014 ddbjcon22.seq 296591 0 1499008269 ddbjcon23.seq 223458 0 752379852 The entries and bases in the CON division are not counted in the numbers given on the top of the release note or 'Total' on the above table.