LOCUS       KCHQ01000001             445 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 248cha ultra-conserved
            element locus uce-502, sequence.
ACCESSION   KCHQ01000001
VERSION     KCHQ01000001.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="248cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-502"
BASE COUNT           70 a          166 c           59 g          150 t
ORIGIN      
        1 atactcacct cctcattact cctcgtgttg aactgctgaa cctccaggtg tgctgctgaa
       61 ccactgcact cactacactc atcgcacact ccttgcttca cctccctttc ttctcctcct
      121 cttcctctcc aggactcgct tcattcttcc tccaccctct ctgctccttt tcctttccac
      181 ttccctgtct ttacatttgt ctcgcctccc cttccactct tccccacatt cctccttctc
      241 ctgccttccc acatcacctc ccttctcctc tctccccctc cctccctcac tcctcatctc
      301 tgtcgctgtt ggcagcctat ttaaatgctc cattggagaa ggattaaggt ttatgcaagg
      361 tcagtgtggg atgtgataat tataatcaca gctttttgcc tggccaatga cggccatttg
      421 ttattctcag ctcagtggct tcaga
//
LOCUS       KCHQ01000002             555 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 443cha ultra-conserved
            element locus uce-504, sequence.
ACCESSION   KCHQ01000002
VERSION     KCHQ01000002.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="443cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-504"
BASE COUNT          127 a          131 c          143 g          154 t
ORIGIN      
        1 cccatgacgt ggcagacaca gtatggaaag cctatataaa attcacacag cccgcatgtg
       61 gtggtggtct gagccgctga taaggctttg caggctttct gacttcagtc tagatgaagg
      121 atgagcttct cagacataga cgttgtccat cctgctgatg ctccctcgtc tcatcgtaaa
      181 ctcttgtgca ccctctggtg cttgctagtc tcccaaactt ctttgtgtag cctgctttgc
      241 agattgtctt ccttgtctgt gtggttgctc attattcaga gacagacgga tctcaggtca
      301 tctgcagctg cagcaaagga gaagcaggaa agatggcgat catccattag accgaccggg
      361 cgcacgcatg aaatacgagg acaacttttg ggaggatcgc ttgaggagaa gactgtacca
      421 gtgagttttt tccccccctc ttgcactata tttccagttt cgccaagatt tcggctgggc
      481 tttcaaggtc tgcgagaacg tcggtatggt atatcatggg atataatttg gagagtgcct
      541 cgtgaatgac ctgga
//
LOCUS       KCHQ01000003             289 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 540cha ultra-conserved
            element locus uce-505, sequence.
ACCESSION   KCHQ01000003
VERSION     KCHQ01000003.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 289)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 289)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="540cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>289
                     /note="ultra-conserved element locus uce-505"
BASE COUNT           69 a           71 c           54 g           95 t
ORIGIN      
        1 gtatcttttt gctgatttca tttccctgat cctccttatc cccctggcct gtgtacctct
       61 attaattaga aagtagggat ttccactcat caactgatgg gtttcatgct ctgctctgtc
      121 acaaatctcc tgtccacgct atctctctcc ttccaagcca tggctgcttt ggaacgtaca
      181 tactccgctc aggcttcaat ctcagctgcg agtcagggtg gctttggcga ttcataaata
      241 tttataaacc gattaagaaa gaataataaa gttataagac agtggttgg
//
LOCUS       KCHQ01000004             412 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 640cha ultra-conserved
            element locus uce-1205, sequence.
ACCESSION   KCHQ01000004
VERSION     KCHQ01000004.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="640cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-1205"
BASE COUNT          102 a           73 c          124 g          113 t
ORIGIN      
        1 catgtttgtt aagagccatc acatgcttaa gtaaccaaat tagacgtgga gttaatgtgt
       61 tagctcgtga aaaagctggt ctgatttgcc ttggttgtgg gaggctgaac aatgtgacag
      121 tattgtgctg ggtgtgagct ctctgttgca gtgagtcagt gtgagggaag gcaggaaggg
      181 gttaaacaga aattgagcgg ggatgctggg ggcagcagtg ctgcagaaca tagcagtgtt
      241 cgtgcgaagg caagtcattt cccgaaacac tgcagacaca tggcctgcgg cgctctaaaa
      301 cctttggaga ccaaaatggc ttgcaggagt tagaagtaat aaggtgtttt tttgccttct
      361 ttctccttga ctgaaattct gcacggttgc tatgcattgc catggagctg tg
//
LOCUS       KCHQ01000005             307 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 734cha ultra-conserved
            element locus uce-1204, sequence.
ACCESSION   KCHQ01000005
VERSION     KCHQ01000005.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 307)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 307)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="734cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>307
                     /note="ultra-conserved element locus uce-1204"
BASE COUNT           85 a           78 c           57 g           87 t
ORIGIN      
        1 tctgttggta taaacggata ttaaaagtct atattgtatg tcactttgac tttagcatag
       61 tcactttcct ctgaccataa atatatgcct atgcacgcta actgtgtgga aaatgcatgc
      121 agcctccacc tagcataacc acccctgctg cactcccctg tggataacaa atgggccttt
      181 tctctgggaa ttgaggctaa acgatggttt cacttagaga gcaaagtgac tgtccatctt
      241 cataacagtg ctctccatca aagagcaatg aatcccatcc cgtcccactg gctctgatta
      301 aacgcag
//
LOCUS       KCHQ01000006             258 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 824cha ultra-conserved
            element locus uce-508, sequence.
ACCESSION   KCHQ01000006
VERSION     KCHQ01000006.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 258)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="824cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>258
                     /note="ultra-conserved element locus uce-508"
BASE COUNT           60 a           62 c           67 g           69 t
ORIGIN      
        1 tgtgtgtgtg tgtgtgtgtg cgcgtgtgtg tgtgtgtttg tgtcgtgtgt gtgttctctc
       61 cagctgcctc cgttgattac ggttcctttg cagacagatg cagcacctgg ctagagctgc
      121 ttaggctgaa agctcacacc ataagacgag gatcagttaa gacaagtagg aggacacagt
      181 ctctagcaca ctctggtgat catacccaca tatgcaaaac acggtttctc aagcagtcca
      241 cacacacaca cacacatg
//
LOCUS       KCHQ01000007             232 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 917cha ultra-conserved
            element locus uce-509, sequence.
ACCESSION   KCHQ01000007
VERSION     KCHQ01000007.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 232)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 232)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="917cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>232
                     /note="ultra-conserved element locus uce-509"
BASE COUNT           49 a           90 c           43 g           50 t
ORIGIN      
        1 cctagcccat ctcagcacat tcagagccat cccgaagccc agaccgcggc atctttcact
       61 tctgctcaga ccacagttgg tttccccgtg gctcaccccc actcaggcta ctcaagcagc
      121 agggacttca tcctcaggag agaactctca gcctctgcta tgcatgcact tggcgaccag
      181 catagttccg cctcctcccc tcatcaccat ggcatgttca tctccccaac ag
//
LOCUS       KCHQ01000008             459 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 1013cha ultra-conserved
            element locus uce-1209, sequence.
ACCESSION   KCHQ01000008
VERSION     KCHQ01000008.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1013cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-1209"
BASE COUNT          148 a          100 c          105 g          106 t
ORIGIN      
        1 aacagatgtc tagactcccc ctacagtgca gcgtcccact cccaccgggt atgcgcaaag
       61 tcacccagtc acccacgcat taaagagagg cagctgccag agcattagtg tccaaaaatt
      121 cagccgagag acagacataa acaagcatga cagttggttt tggggatgcg aggaacgctg
      181 attgacagtg ctctgtcggc cggattagag acgttcattt cgtcctgaac tcaattatat
      241 tttacaaagg ctgacatccc cagttaattg cagcctttcc acatgaggga attatttgca
      301 cttctcaatt ccctggccat gtgtactctg ttccgcatgt gcaggcttca tctaatatgt
      361 ggaaatattg caaattagat cagtaaaaaa agaaaaaaaa aatctgggaa aaggaaaaaa
      421 aataacttag ggaagtgtcg agaggcagaa aggagtgaa
//
LOCUS       KCHQ01000009             342 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 1170cha ultra-conserved
            element locus uce-1080, sequence.
ACCESSION   KCHQ01000009
VERSION     KCHQ01000009.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 342)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1170cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>342
                     /note="ultra-conserved element locus uce-1080"
BASE COUNT          104 a           75 c           76 g           87 t
ORIGIN      
        1 tggcactatc agctgagccg ccaaacccaa ttacctttta aaaagggagg ccaccccagc
       61 taatcatggc tgcctaacct gatttgcctg tgatgaagag acgggataaa gagcagttaa
      121 tggagggaga atgatctcac aaatacaaaa aactcaattc atttctccgg gagagcaatc
      181 tgtccgattc agcggtaatg gagtggagat tcattagtcc tcgggcctta gtagtagcac
      241 tgtcccctta tcaactgaat gacaaaagaa cattcagggt gctcctttta tacacttcat
      301 gtcattggga agacacctag aaatatcact gtattggtta tg
//
LOCUS       KCHQ01000010             497 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 1264cha ultra-conserved
            element locus uce-373, sequence.
ACCESSION   KCHQ01000010
VERSION     KCHQ01000010.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1264cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-373"
BASE COUNT          144 a          105 c          107 g          141 t
ORIGIN      
        1 ctatgcatat agcaaaatgc aaattcactg agaggggtag aggatgcaac aaaaacacgt
       61 ttcatacatt gagtaaaatt tattccatgc atctgaatgt gccaccccaa cccgagcaca
      121 tcatttgctc gacattcagt acatctgttg tgttaagtga ctgtaattta ggtgacattg
      181 gcacaaagcc tcttaatgta gccccggtgg accccctgta agaggggcac gcgggaccaa
      241 acagaggcat ctcgcagctg gagccgcgtc aaggatcatt tccctcttca catgattaat
      301 tacagtttga tcacttgaat ctaaatctga ttaattttgg tcacatgtca gggaggcatc
      361 agtggtctat aatgtatact gtgttaatct gttccagtct ctccttgaga atcattttat
      421 gaggttagaa catggaaaac taatgttgcg catgtgtgaa gtgctgaaac gatcacttta
      481 tgtcactcac acatgag
//
LOCUS       KCHQ01000011             427 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 1445cha ultra-conserved
            element locus uce-371, sequence.
ACCESSION   KCHQ01000011
VERSION     KCHQ01000011.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1445cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-371"
BASE COUNT           92 a           85 c          118 g          132 t
ORIGIN      
        1 ccatcctcca agacgtttgt gctgtagctc tgctctgttg tgtggtaatt tatacattag
       61 tgctttttcc tctgctaagt ttacgtatca ggacgcaggt agttaatgca cagatagcct
      121 tttcctgtgg cactgtgttt tataccttgg cctcccgatg cgagggtgat agcatgtggg
      181 gcgtttgatt tctacgccag gccgtaatga agtttgacat ttagtttgga gagagcagcg
      241 gagcgcgatc aggccttgat tagtacgctc taattgagga taataagggg gaggcggtga
      301 ttgtttctaa tttttgccat taattgcagc cgttggcttt gattgaggac aggcagggct
      361 gccatgtcaa ggggcctggc ggaatcatag tgttcctcac ccggagcctc ttgaataaca
      421 atgaaat
//
LOCUS       KCHQ01000012             501 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 1542cha ultra-conserved
            element locus uce-370, sequence.
ACCESSION   KCHQ01000012
VERSION     KCHQ01000012.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 501)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1542cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>501
                     /note="ultra-conserved element locus uce-370"
BASE COUNT          166 a          100 c          122 g          113 t
ORIGIN      
        1 tcggcggagg aagcgacaag ctgtgaaatg taaaagacca atttcttcca catgtttcag
       61 tgctgggaga acactgccaa gctgtcagcc ggcatcacgt ttaaaatggg ccagggtgct
      121 acccagcaga cctgtcacaa ctcatttgta attaaaaagc ctgtgtgatg tttaaagcag
      181 agcaccccag aaacttttga ggactgttaa ataaagatga gctgtgcgtg caaaaaaaga
      241 gaaaaggaaa aaaaaagggg ggatgtatta ataacaaaga cgctagccag ttgcctttgt
      301 agtcgatcaa taccaaatga gcctgtattt gatttctggc gatggccagc acgtcagcgt
      361 ggctcgaaac taggtgagaa acaaggacgg tatgttttta aaatgaggaa gtggatcctc
      421 attactatta agacaagtca tgccacctct agatgatgag acgaccttgc ctggacgacc
      481 aaataagcaa ccacatctga a
//
LOCUS       KCHQ01000013             608 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 1637cha ultra-conserved
            element locus uce-377, sequence.
ACCESSION   KCHQ01000013
VERSION     KCHQ01000013.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 608)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1637cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>608
                     /note="ultra-conserved element locus uce-377"
BASE COUNT          226 a          129 c          126 g          127 t
ORIGIN      
        1 atattccctc taaaaaataa gagatttggg aataataaca ccaactgttc ttgcatgagg
       61 cccattgtca tctgttaatg tgtcaggaac ttggctgagg ttactttgcg ccactctgca
      121 ttcaaattaa ctgcacatga aaccagttaa ttaattttgc acctcaaggc tttgaaatga
      181 aagatgcgta caaaggggaa actaaatcag aacgggagca ggcacaacac aaacacagac
      241 cagtgggaca aaggagaaag agaaaaactg tgcagttacc tttcccaaca ttctttttgg
      301 tagctgacga aggagaggga atcataggta atttcaactc agcacgattt gactcagtca
      361 gaaggtagtg ggacttatag gcatatgaac ttaatatggt gtcagtaagg tcttgcacta
      421 acagccctac acaagacaca caggaagaga cggggggtaa gccgcagtca aactagaaaa
      481 ttacccaaaa ttcacaaaaa gaagagaaag aacaaactct cacgcacagt ctctctcaca
      541 cacatgcaca cacacacaca gaagaaacaa gtaaaacaag gtttgtcccg acacaaagag
      601 gccaaaca
//
LOCUS       KCHQ01000014             390 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 1730cha ultra-conserved
            element locus uce-649, sequence.
ACCESSION   KCHQ01000014
VERSION     KCHQ01000014.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1730cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-649"
BASE COUNT          103 a           84 c           89 g          114 t
ORIGIN      
        1 cactctgtct gcctgggcta aaacaatgaa ttctaatgca tctggtaagg ggacgagata
       61 agagtgtgtt attaatcttg tgtcacatat atcagctaat tacatacttg ctattccagt
      121 tctttccatc tttacagcca agctgtctca ggacactgca cctatggcaa ggagataaaa
      181 aggtaagcat tcagggctgg taaacagaaa tggcagcagg aatttatcac cggaggtttt
      241 ttttgcgata cttgcctgtt gataaaatct atggcttgtg ctttgagctg ctctgcactg
      301 tgcaagtctg ctaggatgag ggtgtcggcc acattctcca ctgaaaggct gttgcacaag
      361 gcctcttcac acatgacctt taaacgctcg
//
LOCUS       KCHQ01000015             348 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 1821cha ultra-conserved
            element locus uce-375, sequence.
ACCESSION   KCHQ01000015
VERSION     KCHQ01000015.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 348)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1821cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>348
                     /note="ultra-conserved element locus uce-375"
BASE COUNT          113 a           51 c           62 g          122 t
ORIGIN      
        1 aaaaaagaaa aaaaacttaa attatgaact caatgctttt gggggggaaa aagctgagag
       61 aatattgtaa caaacttcgt acagagttca gtctattaat tgtttcatgt tagatattct
      121 atgtgtttac ctcaattgaa aaagaatgtt tttgctagtt tcagatctgc tgtggcattg
      181 atattgtatg tccatgaatt ccttcctttt tcagcacgtg ttcctcacta gatgataaga
      241 tgccgtctcc cttaagcttt gtcaaaaata cattaaatac ttgtatgagg actgtgacgt
      301 aatgtttaaa aggtgttcag tcacaaatgc tgtaataaat atttcatt
//
LOCUS       KCHQ01000016             255 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 1911cha ultra-conserved
            element locus uce-374, sequence.
ACCESSION   KCHQ01000016
VERSION     KCHQ01000016.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 255)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 255)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="1911cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>255
                     /note="ultra-conserved element locus uce-374"
BASE COUNT           78 a           64 c           49 g           64 t
ORIGIN      
        1 acttacaggc tgcaaagaga gagtcagacg aagcctcgcc gtcagtgcga ttatatgtta
       61 tgtgcaatat actgtcaact ccccaaaacc ataaaactta ctttaatggc taccacgtga
      121 ccgtttatgg ccagtgagcc tatctggccg cgctccggat gatttttacg atctaattca
      181 tagacaaaac cccccattca tttagcaccc aaatgtcaga gagccagaat cggcactaat
      241 aaagtttaaa gcttg
//
LOCUS       KCHQ01000017             240 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2078cha ultra-conserved
            element locus uce-273, sequence.
ACCESSION   KCHQ01000017
VERSION     KCHQ01000017.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 240)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 240)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2078cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>240
                     /note="ultra-conserved element locus uce-273"
BASE COUNT           71 a           44 c           44 g           81 t
ORIGIN      
        1 tttattcgtt atatttccta attcagtttg acgaatgagt gacagcttga cacttcattc
       61 ggcaagatta atagaacgac acaatattta cgtggcagag acagccaatt atcccaccat
      121 ctatcatcca gattatcttt ctgattgaaa actactcgtc catgtaatcg gaattatttg
      181 gaattagaag ggaatttatg gcttcttgtg tcacttttcc tggacggtgg taaattagaa
//
LOCUS       KCHQ01000018             535 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2128cha ultra-conserved
            element locus uce-270, sequence.
ACCESSION   KCHQ01000018
VERSION     KCHQ01000018.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2128cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-270"
BASE COUNT          154 a          125 c          130 g          126 t
ORIGIN      
        1 ttacattttt gcagaatata ttagtaaggg cagaaaatca gattacggtc tgtcaaagaa
       61 aaaaatcttc attgatgtgg ccaagaagaa gaagaaaaca tagagccctt tgcggtctga
      121 agtcatggtt gtccttttac tgtaagatat gctgttgtgc atactgcgcc tgcaacacac
      181 atttcaagtg ttggcctagt gctcatcgtc atgcgcctga tttgacatgg cttaaataac
      241 tatcttcctg ccagtgattg gcattcacac aagaaggggt gagtgggact ggggagcaga
      301 tggtgacatt ccacatgacc aaactgatca atcagcatgc tgggacgcag gtgcagcaca
      361 ggcgggcagc accacaccat ctatttcacc atctacgggg cacaaacaca tgggcaccaa
      421 tcgtggcacc ctgagggtct gcatgctcct ctgtcccgct gtgccaaggt tgatgacatc
      481 agaatttccc atccgctctt ccagaggacg ccaagaagaa ggaggaaaaa aacac
//
LOCUS       KCHQ01000019             635 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2293cha ultra-conserved
            element locus uce-276, sequence.
ACCESSION   KCHQ01000019
VERSION     KCHQ01000019.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 635)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 635)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2293cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>635
                     /note="ultra-conserved element locus uce-276"
BASE COUNT          102 a          206 c          145 g          182 t
ORIGIN      
        1 gtgactagga cttacctccg ggtctgtaaa caacatcgtc ttctgtgatg aaggacgtga
       61 tttctccgtt ctctgtgcgc tcatagcgcg acttcttctt cggcgtcttt ttcttgccct
      121 tcttgccggc ctcctcggcc gtgccgctgc ctccgcctgt gctgccattg tcgttgtcct
      181 catcttcgct gtgctcgctc tctgcatagt tcttggcccc gccctccagc gtacagctac
      241 gtcggggcct ggagctctcg ctctcacggt cgcccctgtc cccgtcctgc cgccgggact
      301 taccgccctc tctcttgtcc cggtccctgt ctctgtctct gtcccgctct ttctccctct
      361 ccttctcttt gtcggccgtc atgatccgcc acgtgccttc ctcagtcctc tcacggctgg
      421 gcctccgtga aaggtagact gtgagcctgg gcttcagtct tctgaattta ccagtcaaat
      481 ccagggaaaa tttggccaca ccaacaaccc cagtgtttca gaaaagctgt ggatacgaga
      541 gaagaagggc aattagcata acccaatgtc aataaccatt atcctgaaag tgcacaagct
      601 acattttctg agtacaaagg gtagttttgt gctgg
//
LOCUS       KCHQ01000020             477 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2388cha ultra-conserved
            element locus uce-277, sequence.
ACCESSION   KCHQ01000020
VERSION     KCHQ01000020.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 477)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2388cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>477
                     /note="ultra-conserved element locus uce-277"
BASE COUNT          153 a           88 c          126 g          110 t
ORIGIN      
        1 accctgctag cagacagcta ggaggatcac agggaggcaa gtagagaatt ttttatcatg
       61 cggggaaata cgagggaaaa tataagagga agcagtcata caaagagaca gcccgggaga
      121 gacagacaga caggcaggaa gacagagaga caggcagaga caaatagaca gtgctcgtcc
      181 ctagtttggt aatccgatgg agagattagc aagcaggcag catttgggtc ggattatcga
      241 gtcattagaa aagactggtg ctccagagcc tctctcatgt gttaatgtgg ctttagagat
      301 cctcagtgca gtctgcgcag attgtctaga tagtgctgag agtatataca gtagagagtc
      361 tttcaatatg taaatagggc cacataaacc taatgccccc acggattgat ttgtttgtat
      421 gcatgtatac atccattatt taggtcccat atgaaataca ccaatcattg tgaggac
//
LOCUS       KCHQ01000021             338 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2485cha ultra-conserved
            element locus uce-274, sequence.
ACCESSION   KCHQ01000021
VERSION     KCHQ01000021.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2485cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>338
                     /note="ultra-conserved element locus uce-274"
BASE COUNT           65 a           90 c           63 g          120 t
ORIGIN      
        1 atgacaaagt gcagcccatt ctcctcagcc ccagccactg tcgactagac cctatctagc
       61 atgtgtgtgt ttttctccca ccaaacctac tttatacgct ggactttgga ggccgtctgt
      121 cccttttatt tgcagttaat ttttgccgcc ttcaccgggg ctcttcacca tgaatcttca
      181 tttcgccgct gacacccttg aatgtgaatt cctcatttcc tgtcctttta tttatatctg
      241 ttgcctggtg atttgatcat gctgggaata caagattagc aattgccttg tccttggttt
      301 tgcctcaagg acatctgctc ctgaaatgtt attgtttg
//
LOCUS       KCHQ01000022             334 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2579cha ultra-conserved
            element locus uce-1206, sequence.
ACCESSION   KCHQ01000022
VERSION     KCHQ01000022.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 334)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2579cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>334
                     /note="ultra-conserved element locus uce-1206"
BASE COUNT          105 a           80 c           63 g           86 t
ORIGIN      
        1 cctgtggcag atcctcagca ccatcaggca caacgtagct gcagcctgac agctaattag
       61 aaacgacacg gatttctccc aatgtaacag atgttgccta atcagtccag ctcgggagaa
      121 ccgtgcgcca gcaacatttc atgcacaatt taaccatcta aaagggatga aatacttaat
      181 gcattgtaag gccagcacag ctgtttctct cgtcagaaaa tttcccagtc aaaaatatgc
      241 atgttttatg taactctaac cgagtgttta taatgctata atagctgaga aaaaattgct
      301 gccacacatc tgccaaagat ttcagctcta ttgg
//
LOCUS       KCHQ01000023             392 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2673cha ultra-conserved
            element locus uce-572, sequence.
ACCESSION   KCHQ01000023
VERSION     KCHQ01000023.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 392)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2673cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>392
                     /note="ultra-conserved element locus uce-572"
BASE COUNT          101 a           84 c          118 g           89 t
ORIGIN      
        1 agaattacca ctttacttgt gggccctggg gccttggagc cgactttgac atcaagagaa
       61 tatgtttggg aaaaggaatg tgcggcaagc tttcacctcc aggtatttat cttctaaggt
      121 ggggtggact agggaagggg gtggtgaggt ggcgggtgca gccaggctat gtcatggcag
      181 gtcgagaaga gacagacatg aacctgtctt agtgcatatc ccctgagact actgtggcac
      241 agaggctgag agcgatgcag ctccgatggc cacttgaagc caagttcagc agagtctgtc
      301 agcaaaacat cacacgctgc ttttcacaga ggcgatagtt cttagatagc tgacacgctg
      361 tttgaaaacg gagacacaac gcaggcgtat tc
//
LOCUS       KCHQ01000024             298 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2723cha ultra-conserved
            element locus uce-507, sequence.
ACCESSION   KCHQ01000024
VERSION     KCHQ01000024.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 298)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 298)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2723cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>298
                     /note="ultra-conserved element locus uce-507"
BASE COUNT           64 a           65 c           69 g          100 t
ORIGIN      
        1 agagacatgc tgtatttttt tcccttttta gacagtcatt ttaggctttt ttcatgctct
       61 cttgagtctt tgacgtctct gagttaagta tctgcagcta taaggctgag gaaaatattg
      121 gactgctctt ggccttttct atttcatcct ctgacccgcc atgttaccca tgatcggtga
      181 aggagaactc tggcaggctg tgtcaaaagt gacagccgat cgagtcggga tgagcgccat
      241 cacgcttcac aggatggagg catgagttct gagtttttcc cctttttgtg caatatac
//
LOCUS       KCHQ01000025             481 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2745cha ultra-conserved
            element locus uce-1084, sequence.
ACCESSION   KCHQ01000025
VERSION     KCHQ01000025.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2745cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-1084"
BASE COUNT           92 a          143 c           97 g          149 t
ORIGIN      
        1 tagaacaatg agccgggcct gtagggggct aactcgctgc gtcacgcctg gacggtgggg
       61 tattttgtca gtttaatgaa ttgtccgtca ggccagggcc acatcgcagg ctgcgcaggg
      121 agaggccagc agggacccag acactaagtc ggtatttatt acactgcctt tgtcactaat
      181 tgagctaatt atcactgact cctcagcact cccacaggca gcaccccctc cactcactct
      241 ctctaccaac tctctcactc tcacggctgg gatttgaact ctgccttccc tcttcttttc
      301 ttgaatcagg tctgccactc tctctctcta ttgtttcttt ctgtgtatcc aggattgcct
      361 atctgatctc cctcaagcca ggtttgtatc actttcacat ttgtgagctt ttgtttcctc
      421 ttgactcgtt ctctatttgt cacatactgt aagccgagtc atacgttcac ccctgttatc
      481 c
//
LOCUS       KCHQ01000026             452 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2811cha ultra-conserved
            element locus uce-891, sequence.
ACCESSION   KCHQ01000026
VERSION     KCHQ01000026.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 452)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2811cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>452
                     /note="ultra-conserved element locus uce-891"
BASE COUNT          116 a          111 c           98 g          127 t
ORIGIN      
        1 aaaatccacg agaagccgtc gacaattagc aatgatgtca ataagtcaac atgattaaca
       61 tcgggatcgc tgggatgtaa atacttgaag aaacacgcac tgcgctccca caagcctccc
      121 tcctaagcag ctccttcatg cgatacagcg agtgagcaag ggggtcgcac acaccgggct
      181 tgctgacaag ccttttttta tgacattcat caaagccatc tgccattttc cgctcaatta
      241 atttgttatg ggaagtggga tcaattaagt gcgcactgta atggctttat atccttgttt
      301 cccttttata gcccaatatt ttctgtgctc cactctggca tgaaaaggcg aaatcgatat
      361 ccccggctat tttcccctcc cgtggactaa tttgtttttg ccactctctt cctggcatga
      421 taaactggct gtaatgaggg gttagggcga gg
//
LOCUS       KCHQ01000027             732 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2908cha ultra-conserved
            element locus uce-1317, sequence.
ACCESSION   KCHQ01000027
VERSION     KCHQ01000027.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2908cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-1317"
BASE COUNT          229 a          139 c          151 g          213 t
ORIGIN      
        1 atcgaagtca gtctctcagt gccgcagcat ctgtggacta attatgtcca tcaaaagaag
       61 gtatgaatgt cacccatcaa aacagttgtg tcttacagat aattacatac ttctgtcttt
      121 gtagagagca caccatagaa atggtcttat ttgtgagatg cagggtggag atggcctgca
      181 aagcaataag tgaacatggt agctaagcag actagtagct gtgacatggc attatgggaa
      241 attacactta ctgtgagatt gcataaacca ctcaccaagc tggaatccag ctccttaaat
      301 taagagaacc catttcaccc atcagacaga gcaaggtaat gaaatagcag atgagaggtc
      361 tcaaatgtaa ttttccatgt ggagttcttt tgtgccgtta tctcagaggg tgcaataatg
      421 attctgtgaa tgacttttgt gcaccccata atggcccaca gtagaggcca cagtgtgcaa
      481 aactataatt accatgtgat ttcaaaactc aacattttca gcatgttgta aagacatcct
      541 ggcctttgca taattgtaac agcgatgtca aaagtattcc attttgagca acacgtaacc
      601 tactatgaac atttacaatg acaggtgata ctgaaattcc gtttagtttt ttgtcattaa
      661 aacaaattaa ttaccttgtg aaaagcatgt ttatggaatg cagtctttgt cagcaggtct
      721 ttggggacct tg
//
LOCUS       KCHQ01000028             873 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 2975cha ultra-conserved
            element locus uce-49, sequence.
ACCESSION   KCHQ01000028
VERSION     KCHQ01000028.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 873)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="2975cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>873
                     /note="ultra-conserved element locus uce-49"
BASE COUNT          261 a          222 c          162 g          228 t
ORIGIN      
        1 cctctttgcc gtaatgactg ccaatctatt gtctaagttt cctggtttca tttcccacac
       61 ataaactcag aaacttacaa gtttacgtga cctcattcta catgaaacaa cctctaatta
      121 catgaagtgg aagccgcaac aagaatacac ttctcactga ataggtctgt actttgagtc
      181 ttctagtctg tgtttcggtc tgactttctg aacacactgc agagtgagaa acttaccatt
      241 tactcatgca tatttgacag cacctagtag gccccttttt atgctgtcac ttctggctcc
      301 cattcttcct ttcccctagg agaggacaga gccgggggct tgagggcagc tacctccaca
      361 gtcccgctgt cccctcctcg cctaattttt gttgtccagc cctttgaaac ctcaatctca
      421 tgcagaacca aagaatggtg atccatgtgc aacaagtgcc agtgccatgg aaacccccgt
      481 tttcccccca aaatattcct ttttatccct tttgaagacc tgtcaccggg cagagcaggc
      541 atcacacgac cccaggccaa gccatgacaa agcctatttt ctggctgctt cttgattgat
      601 taaaaaagac tttttagtaa aaccatgtta aaggacacaa aaagtgacac acagaagaaa
      661 agggccctcg gggatggccc aatcagacgg tttctgcggc aataacgcac agaaaaagaa
      721 acaatatcat aatcgccaca aaggaaggat cagggcaagc gtgaaacatg acaacaatgg
      781 tgattacgat aatgacagaa gaccatttat gatttagaaa atactgtagg tcacatcaaa
      841 ctacacatac tataattgtg tccatttaca caa
//
LOCUS       KCHQ01000029             304 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 3063cha ultra-conserved
            element locus uce-878, sequence.
ACCESSION   KCHQ01000029
VERSION     KCHQ01000029.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 304)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 304)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3063cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>304
                     /note="ultra-conserved element locus uce-878"
BASE COUNT           78 a           60 c           79 g           87 t
ORIGIN      
        1 ttgatgctgt tttccctcct cacagggagg gagagggaga gggagggaga gggaggatgg
       61 gggaagggcc tcagtctgca agatcagcac aagtggaatt gcattgattc agttaactgc
      121 agagttggag cgtgatgtgg aattctgttt atcaagggtg gagtttacac gataggctcc
      181 attttgatct tattttctac attgcattca taatcagtcc ctgctctctg actttcagca
      241 ataaaacatc agatcatctt tctacatata gctcagtccc acctggagtt tcacacgtgc
      301 aata
//
LOCUS       KCHQ01000030             357 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 3148cha ultra-conserved
            element locus uce-599, sequence.
ACCESSION   KCHQ01000030
VERSION     KCHQ01000030.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 357)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3148cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>357
                     /note="ultra-conserved element locus uce-599"
BASE COUNT           75 a          120 c           54 g          108 t
ORIGIN      
        1 cttgcacaca cactgataca gtcacagaca cacacacacg cagacacggt cgtcctaata
       61 acgtccatat gtcttaaatt atgtgaaagt gctgcgagct gctggttcca cagacatgta
      121 aagactcctt tattcttctc tctgccctcc tttccctcct tctctctctc cttcctccca
      181 cctcttcccg tctctccctg ccccttcatc catccttctt taaaatgctt tttattcctt
      241 tctctgctcc tcttagtcaa acaagcagtc catacgtctt cccccccgct tctatcatca
      301 cgtcgaatca gaagagggct gctttgttgg caggatgaag ctcagccagg tgaagct
//
LOCUS       KCHQ01000031             223 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 3319cha ultra-conserved
            element locus uce-1336, sequence.
ACCESSION   KCHQ01000031
VERSION     KCHQ01000031.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 223)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 223)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3319cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>223
                     /note="ultra-conserved element locus uce-1336"
BASE COUNT           69 a           42 c           49 g           63 t
ORIGIN      
        1 gaaacttata taagctcaga gtaagtacac cattcgcata tggataattg cctgtgaggg
       61 atttcaatac aaattgaggc tcaggaagcg gataagcaac aggaagggtg tctctgctcc
      121 tgtgtaagca tccaaatcta ctgtgagtgc gcaaagaacc atgactaact cttactaagt
      181 ctgtttgtgc gtttttagga aaagcttaaa gatactttcc tct
//
LOCUS       KCHQ01000032             491 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 3416cha ultra-conserved
            element locus uce-1335, sequence.
ACCESSION   KCHQ01000032
VERSION     KCHQ01000032.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3416cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-1335"
BASE COUNT          102 a          146 c          102 g          141 t
ORIGIN      
        1 acacctagtc tggctaagtg ttgttgttta tgtcagggac agtgtttatg gtgcttggtg
       61 ggcctcttag tgcagttaag tttctacagc atcccactat ggccatcaat ttcagtacaa
      121 gatcgtctag gtttgtgttt tttctccccc cactctcttc ttcacctccc ctcttccgtg
      181 ctcggctggt gttgcctgcc ttctccctcg tctccgcttg cccatctcac cttccttcct
      241 tccagatggc gcatttcaca acctgctagg cacgatcaat caagcccaga tgcagactgg
      301 gctattaagg tcagtaatga tcggcctttg agcgttatgg gcccggctcc tgttgtaaag
      361 ccatgcatca aactctgttc cagcactcag ctcgcctgcc cttaacaagc cagcttaaaa
      421 tatcggccgg aggatacaaa atgaaaaggg tacaacctta tctctccaaa gacaggccgc
      481 tctagcccca a
//
LOCUS       KCHQ01000033             288 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 3687cha ultra-conserved
            element locus uce-1332, sequence.
ACCESSION   KCHQ01000033
VERSION     KCHQ01000033.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 288)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 288)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3687cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>288
                     /note="ultra-conserved element locus uce-1332"
BASE COUNT           67 a           89 c           43 g           89 t
ORIGIN      
        1 cctttctcct atccctccac tctccatccc tgtctctgcc tatcctcctt atatatcctc
       61 agccttcgct ttgccttctc cccatctcca gcagcatgaa tatattatta tctacacaat
      121 ggagccctgc ttattgttta tgaattacca gccttgcggc caaacaaagc ctattttcat
      181 aagaaacctc catttcattt cagctccaat tagattgggg gctaaagaat aggagtcctc
      241 aggcctcagc ccctaaggat ggcaggtcca ttcagcttca ttcaatgg
//
LOCUS       KCHQ01000034             388 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 3835cha ultra-conserved
            element locus uce-434, sequence.
ACCESSION   KCHQ01000034
VERSION     KCHQ01000034.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 388)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 388)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3835cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>388
                     /note="ultra-conserved element locus uce-434"
BASE COUNT          111 a           89 c           63 g          125 t
ORIGIN      
        1 tcacaattca cccacactga tatcatatag ttgcatctga gtatgcatta tgccaccaat
       61 gaatgttctg cacacgtcat tgatgtaaca atcaataata atattaatac taataataat
      121 agctttgtgc tcctctttgt tcttctcttg taagtttgtt tcacccttct caatgtctag
      181 gccgtttaaa tctaatctag ctgaacacat tactctgctc acacagcccc cagctgaacg
      241 tagcaactca taaaatccca atatttcagc catattgatt cctctggtaa aattggtctg
      301 agctatgaat gtgctgcagc actgtacact gaaatgtttt gcagccgcag gggaaaagaa
      361 tgagggtgac cttgaatgtt ttttcccc
//
LOCUS       KCHQ01000035             281 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 3929cha ultra-conserved
            element locus uce-435, sequence.
ACCESSION   KCHQ01000035
VERSION     KCHQ01000035.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 281)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 281)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3929cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>281
                     /note="ultra-conserved element locus uce-435"
BASE COUNT           79 a           56 c           61 g           85 t
ORIGIN      
        1 aaaacaaccc attaaagaag tggggagcag gggaaatgca ttttccaaat tgaacggtgg
       61 gatttacagt cggtttaacg ccgctgaccc ctaacacgct aatgtttggt tcgtgtcatc
      121 agccgtccct ccccatcttt tatcacctcc attgtcgagc tatctattta attgaaagaa
      181 gttaattgaa tgaaaatgat caactaagct tgtattaata ttgctaatgg aactttcttc
      241 ttggccatgt ttggagaacg atgtcacgct ggagtttggg a
//
LOCUS       KCHQ01000036             308 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 3966cha ultra-conserved
            element locus uce-436, sequence.
ACCESSION   KCHQ01000036
VERSION     KCHQ01000036.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 308)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 308)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="3966cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>308
                     /note="ultra-conserved element locus uce-436"
BASE COUNT           88 a           76 c           82 g           62 t
ORIGIN      
        1 tgaagcaccg catccaaaac cttcaggact tcttgttgaa taaaaaaccc actcctgaaa
       61 aggtgctgct gcttctccac aagacaaaca caggcaaagg ctgatcacca gtggaggtgt
      121 tcctagtaca caggagaggt ggataagggg ccctttcgcg tcgtgcagga tggatgggaa
      181 catgcaaaac taagccctct ttccccgagg actgaaatct ttcccgggag ccaaaactct
      241 aaacccacgg gagaggcgct gtcagaatat gacgctgaag gggcgtggtt ttgaccatat
      301 atggagcg
//
LOCUS       KCHQ01000037             702 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 4127cha ultra-conserved
            element locus uce-430, sequence.
ACCESSION   KCHQ01000037
VERSION     KCHQ01000037.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 702)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4127cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>702
                     /note="ultra-conserved element locus uce-430"
BASE COUNT          173 a          169 c          159 g          201 t
ORIGIN      
        1 aatgaaacag tttccgaggg gcaggcggtt tgtttggctg atttttctgg aggtggcggg
       61 gggtgtttgc tccccgcgtg aactcatgtg gaatttctta gcagataatg actgtcatct
      121 taatgctcag ccagggtcag agtatctatt ctgtgtctga ccgcaggtct agacagcctt
      181 cctctggaaa gcctttttcc cccttccttt taaaaaccca cttctatttt cctgttgtgc
      241 ccaaacaagg attttataaa acgggtgaca tcgccacaca agctgtctgc cgaatccccc
      301 ttaattaaag tgacttttaa agccttcctc agacactaat aaaccccctc tccattaaga
      361 tcctcctaat tactgtgtgc aaaggaaagg gggacacaca gagacagaca gtgtggaggt
      421 aagcctgctg gcatttggcc ccataagctg agcgccacac aaaagaaaat gtcccctggg
      481 ttacccatcc taccagagag attcctcttt ttcgacctcg ctccccctct cctgttttct
      541 tctttatgaa tgaaagtata tgacatgtgg ggctgacagt gtccattcat ggcgctgcat
      601 ggtggaatgt gtgaataagg gctttgaatg aggcatgaat cacggccacc tgaatagtca
      661 ttaagcagtc ttttgacatt accattgttt aaatgtgcat gg
//
LOCUS       KCHQ01000038             616 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 4225cha ultra-conserved
            element locus uce-432, sequence.
ACCESSION   KCHQ01000038
VERSION     KCHQ01000038.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 616)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 616)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4225cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>616
                     /note="ultra-conserved element locus uce-432"
BASE COUNT          181 a          119 c          108 g          208 t
ORIGIN      
        1 ctcgggatag ttaaaagtct ccagactgtg aaggaccaca taactatgat aacttgtttc
       61 gagcatggca aatagccctg tttattgata atttgtgttt aatttcagtc acactttttc
      121 caagatcata aatggcctca ctattttttg tcttcttttt tttcctaatg attttcttga
      181 caagtctgag actttgcact ctcctgaaca catcccaagt cttgcccttg acccaggatt
      241 aatttggctc attgcattta cacagatttc tggagacatg gccacagaac atattaatgg
      301 aaatggtcca gaagaaccaa tggacacctc tgctgcagtt acccattctg agcacttcca
      361 gactttatta gaagctggtt taccacagaa agttgctgaa aaactagatg aaatttacat
      421 agcaggtaag gcacaatgaa tatacttgca tattcaaata tgcagttttc tatgtttaac
      481 aatttgttgc atgtattgtc attttatcac ctttatgaat gggggaattg ggatcctgaa
      541 gcaacttttt gtggtttcct accaaaatgg gtactgcagt gctacaaaat atttaattac
      601 acattactag tgttaa
//
LOCUS       KCHQ01000039             370 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 4316cha ultra-conserved
            element locus uce-433, sequence.
ACCESSION   KCHQ01000039
VERSION     KCHQ01000039.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 370)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4316cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>370
                     /note="ultra-conserved element locus uce-433"
BASE COUNT           97 a           76 c           90 g          107 t
ORIGIN      
        1 agggacagag tgagagtgtg tgttggtgtg cgtgtgtgtg tgtgcgagag agggagagtg
       61 acagagagat aatctctttt gtatttttga tccctaaatg tggtggttgt gtccccttat
      121 cccagctact tagtttctgc agtgcgtaag tgatgccatg cacttaggct gtgaaaagca
      181 ggtcagtatg accactgaga gaaaaccaca tgtgcatcac atggatagcc ctgggattat
      241 tcctcacaaa atgtcttaat tcctctgttc actaatgatc cagggaaaat gccctctaat
      301 ctccattcca ttaattaaaa agagcatgag cccatggaaa acctcaccat ctgctgcagt
      361 ttcattcctg
//
LOCUS       KCHQ01000040             607 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 4412cha ultra-conserved
            element locus uce-625, sequence.
ACCESSION   KCHQ01000040
VERSION     KCHQ01000040.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4412cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-625"
BASE COUNT          138 a          104 c          127 g          238 t
ORIGIN      
        1 gtatttcacc tctccaccaa tatattcttc actcttctga atctctgtca ttgtaacttc
       61 tttatatata taaagaatat atatatatat atatatataa aaaatatctg tcttagtttc
      121 ttaaaataca gcctttgcct gtgctctgtc atcttacagt tcctcttatt tctgtcagtg
      181 gatttgtatt ttttcctttt ccaaagctgg gtcagctttc taatgctctc agatggagtg
      241 caggttttgg gctgtgcagc tattttgctg tcaggctctt gtgttgaaag cagcgtctaa
      301 gtgtgccaaa gttcaatttt atttcttgtt tatttcttgt tttctcattg gaaaatggga
      361 gcagctctgc cctggcaaca aaagtaggct atttgcatac tgcgttgtga ttggtctgtg
      421 cattgatggg cttgccaaat cacgctgtat ctctgtggtg ataggctatg ctaattaggt
      481 gctgttgctg ggattctgaa tagtggttac tgtgtagcac tggtgaattg tgttgtctgg
      541 tgagagatgc tgatagctga acatgctatt tgataatttt ttgattcctt ctggcttaaa
      601 atgaagg
//
LOCUS       KCHQ01000041             476 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 4509cha ultra-conserved
            element locus uce-979, sequence.
ACCESSION   KCHQ01000041
VERSION     KCHQ01000041.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4509cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-979"
BASE COUNT          145 a           80 c          150 g          101 t
ORIGIN      
        1 gcccctccac agctcctgtc ggaagatatt gaaaaagaga aggggcctgg attaatgtgt
       61 aattaaagga aatttggaag ggtgagatgt tgcggaatgt tagatcagtg gctggagcag
      121 tgtggggtgt cctttaggaa ggcttcattg attcaggaca aaaaaacgag agagggcccg
      181 gactgcctcc ctgtctgctc atttatcaag cggggcctga cagaaacttc acagcttggc
      241 ctcttttttc atcccacaca atggagagct acactgtttg ctaaagtttc tgcaccagga
      301 gctggaccaa ggagccaatc tctttggaca aaaagagagg aaaggaagaa ggagggagtg
      361 gagaagagaa agagagtgag aaggagagag gatgggtggg aggacagatg aggggagact
      421 gttgatatag ggggaaaaaa gtaatacccc tggatgtcat aaatggatgg ctctca
//
LOCUS       KCHQ01000042             442 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 4607cha ultra-conserved
            element locus uce-978, sequence.
ACCESSION   KCHQ01000042
VERSION     KCHQ01000042.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 442)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4607cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>442
                     /note="ultra-conserved element locus uce-978"
BASE COUNT          130 a          101 c           94 g          117 t
ORIGIN      
        1 cataaaaaca cacaaacgtc tctcacacgt gcacacagag tcacaaactc acatacacac
       61 accatgccgc gccccatttc tgtttaggga aaaaagtaat tactttctct ccctgcctca
      121 atgccttcaa aagcctcagt ggggcgattc cctggtgagc cagtgaaatt cacttaaaca
      181 gcttttgaga gagtaagcag tcttattgtt gcgcactgaa actttgattg gaaaggaaga
      241 aaaaaatgag aggaggaaga ggagggggca cgagaagatt ggtaaataaa actgttggcc
      301 ggtattattt ttctgtcttt ctttccattt cttttacctc tcggagtctc tgttctcttt
      361 gacgcagcta acgactgtag gcacacaaca acggcgggtt aagcagagct gcacagtatc
      421 atgctgtgtc ttttaaaaca ct
//
LOCUS       KCHQ01000043             544 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 4703cha ultra-conserved
            element locus uce-209, sequence.
ACCESSION   KCHQ01000043
VERSION     KCHQ01000043.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4703cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-209"
BASE COUNT          166 a          115 c          109 g          154 t
ORIGIN      
        1 tagcatgcta cttcattcat catacatcgt tctgggctct caaatatctc atatgcgatt
       61 caggaagaaa ctactaaacc ggcacaaagg atcccaccag gatcagctga agttccatta
      121 aacactgtgt acaaaataga gcacacttgg tagttattat caaatacaca tttcccgcgt
      181 tgcatctaca aaacattagg cctcatttca tggtgtacac gttgtttatg tagcatgggg
      241 aagatgtatc tcaagtgcag tgctcgtgta gtacataatt ccattcacat tgcattttga
      301 atgcatgcat tttgaaatct gttttttccc tcaatcatag tggctgctct gtgttgtatt
      361 aaacagcatt aataatcaca agaggctcag tgtcactcag aagtctccac atcactaagg
      421 cagacagtgt tgtgctgctg ggcatgttgt gctgtgtgaa agtgcttaca cgctccctca
      481 gacaaccaaa gggaataatt aaagacagaa gatggaggca gaagaatgga aagcaaatcc
      541 catt
//
LOCUS       KCHQ01000044             349 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 4883cha ultra-conserved
            element locus uce-206, sequence.
ACCESSION   KCHQ01000044
VERSION     KCHQ01000044.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 349)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 349)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4883cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>349
                     /note="ultra-conserved element locus uce-206"
BASE COUNT          108 a           63 c           65 g          113 t
ORIGIN      
        1 ggagaggggg gggcctacac actttttaag gattccagcc ttgtcatttt caattttctg
       61 ctctttggac atgcttgtat tcagattccc caacatctat tcgccatatc aatcctaatt
      121 agacaatctg ggcccacgaa ggatgggagc ggagttattt gcataattta atcataaata
      181 ctcagtgata catatttcca aatgcatttg tacaattatc ttttcatcct tggggcaaaa
      241 gtattaatat gattaggcaa taattcttta aaaaaggggg aaaataggaa accagcaagt
      301 gtgcactctt ttttaaactc cagctttggg ctatatgaaa aattaatta
//
LOCUS       KCHQ01000045             321 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 4982cha ultra-conserved
            element locus uce-205, sequence.
ACCESSION   KCHQ01000045
VERSION     KCHQ01000045.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 321)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 321)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="4982cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>321
                     /note="ultra-conserved element locus uce-205"
BASE COUNT           84 a           64 c           82 g           91 t
ORIGIN      
        1 gctaggctcc tgggccggag gaaatgaact tagctgaggt tctctctgtc tctaaatgtc
       61 tgccctcaga gttattatgc tgtaattgac taattgacac cttaatttca tttatggggc
      121 tcctgtgttc ataaagcaac ctctgggtgg ggcagtggtc ttgagcggaa gcaaggaagt
      181 caacatccag gacaacaggt agggccttag gccttcagtt ctgtcctcgg cagatgacga
      241 ttatgcattt gataatgaaa tggtcaggaa gaacatactg acttagcaga ggcttaagga
      301 gcatcttact catatgttta a
//
LOCUS       KCHQ01000046             625 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 5076cha ultra-conserved
            element locus uce-204, sequence.
ACCESSION   KCHQ01000046
VERSION     KCHQ01000046.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5076cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-204"
BASE COUNT          200 a          133 c          112 g          180 t
ORIGIN      
        1 acatctgacc agagaggaaa tctggtccag tatggcttaa attatttcac ttccattttt
       61 catgcctcgc cggagatggg aagctgcact gtaaaccaag gtcaaataat caaagcgttt
      121 gctcatacat gttaaacata tcaaatgaga aactgtcact tgcctattag atcatcatta
      181 ctactaaaac aaggctacat gtgacgtact acactactga ttttgctgtt gataaatgct
      241 ctagatgatt tgctagaata tcaaacttcc ttaaacaaaa agtgcttcaa cacagaattt
      301 tcacaggctt ctgcctccat ctttttttct aacagaacga gcacgcacaa gtcagacata
      361 taaacatgtg cacagacaca cacacatggt aatggagatg taactggaag agttctcgcg
      421 gcatatggat gccatttgta agctgcactg agaatgtata ggtcagtctt accctttggt
      481 atctctctat ccatctgttt tcacattact tgcaaattat agtgtcctcc agacccaaat
      541 gaacataaat caggccggtg aaagtgcaga agttttccca tctgtcataa aacaatgatt
      601 taaagtacgg gttgtcaaaa catgg
//
LOCUS       KCHQ01000047            1148 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 5126cha ultra-conserved
            element locus uce-971, sequence.
ACCESSION   KCHQ01000047
VERSION     KCHQ01000047.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5126cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>1148
                     /note="ultra-conserved element locus uce-971"
BASE COUNT          369 a          204 c          251 g          324 t
ORIGIN      
        1 ccttgctaga ctacatgaaa ataactggcc gggcgacaag gtagttacat tctcggtaat
       61 aagctgtggc atggccacat tatgttgcta cttgtattta catggcaacc tcctctaaag
      121 gcgcaatcca tctgagcttt gcctttacct tttcataagg tcgatgtcgt tactgccgac
      181 gtcttttgct ttaattacga tgttatggct tacttgttca caaggttata acatagaata
      241 aatcaaactt cattaaaagt ctcagcaagt caacgcatga gcacacaaaa tcatcacaga
      301 gccaaccaga ttatattcca aactaactct gtgcatctca taaagaggtt gttttccttt
      361 ttcatatttc ataaatatga accagggagg tttgtgtctg tgcctgtcca tttattacca
      421 taaaaatcag ctgactgaag tatctcacta tctgtggagg caattaactg ttttgagaga
      481 atgcgtaata cgggactttg taatggtatc atttggagtc aaggcacaga tgcgccgtgc
      541 ggagccatac tgtaattaga gagaaacgct gtacaggttt tccactaatt agcaaattat
      601 gctgaaaata gcatcaagct aattaacagt tattatggca tttttgaaag tatgacttta
      661 attagcaaag tcctgacgca ggcaatttca aactcgtctc cgagaagatg aggaagaaaa
      721 gaaaaaaaaa aacatggggc atgatcaaga agatacccag attattatga tgccgtcaaa
      781 aactaaagga agaggagaaa aaaacaggag gggaaaagag agactgagtg agtgagggag
      841 ggaagggaag aggaggagga ggaggaggag gaaaaaagca caccatacag cacacagaaa
      901 ttggtttagg tttacttctc atggtcaaat gtaagattat tcttgctttt ctgctcgtat
      961 agcccagatg ttcgatgctc tgtagtgaag gtgcaggtct ttgttgaatt actccaaatc
     1021 agagcaaaag gttaagtgct gtgtatcatg tctgcttgtt gtgtgaacac tttatcgtca
     1081 actccattta gaagtcgtct tttgaaatat taacaatcct aaagcagcta tattacactg
     1141 ctgtgaag
//
LOCUS       KCHQ01000048             387 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 5202cha ultra-conserved
            element locus uce-970, sequence.
ACCESSION   KCHQ01000048
VERSION     KCHQ01000048.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 387)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5202cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>387
                     /note="ultra-conserved element locus uce-970"
BASE COUNT          101 a           78 c          104 g          104 t
ORIGIN      
        1 tgcagacgga ggcctccttc cacagattgt gggtgtgcga actgtcaaat tggagtgggt
       61 gggtgggggt ggagggagca catctggagg gaatttattg tataattcag tctattattg
      121 ctgcggtcgg tgcttaagga gcacgcacac aattaccgtc cactctgcaa ggctacaagt
      181 ggcctctggc ctaaactaat aaactgtgga ggagggtgga gagaggagaa ttcatttgag
      241 gttatcatca tcacactcct ctctgctacc tctcgcactg gactgacact gacacttacc
      301 agagtttaca ataaatcaat gaggaacacc tactgttcag gcccagatta tggtcaaatt
      361 agatttgaat ctggttttaa aggtttg
//
LOCUS       KCHQ01000049             552 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 5298cha ultra-conserved
            element locus uce-201, sequence.
ACCESSION   KCHQ01000049
VERSION     KCHQ01000049.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 552)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 552)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5298cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>552
                     /note="ultra-conserved element locus uce-201"
BASE COUNT          136 a          143 c          139 g          134 t
ORIGIN      
        1 taccattaga cctaatggag cgcggtgtga gggacagcca atcatgatgg cgtcccgtca
       61 gtgacaccga catgtatctt ggtgctcatt atcatccttg aacagcgcca atttacatct
      121 gatgctctga ctaattctgc tccagtgttg tcaagaggca taggaagtgg cctggccgtg
      181 atgacagcgc ggctgtcagg agcctgtgga tggaggattc ctcggggcat gatttaatgc
      241 ccatgtcaag ccccgctgtc agcctctctc tctctccccg ctccctgcgc tccttctctc
      301 catccagcca ttaggattca gccagcggag agatggagcg atataagctg gcgattggcc
      361 tgcttaggat tcacactctg ggcaagaaaa ataacacgcc ctgtttcaca agtgattacc
      421 ctttccctgt aaactgcaat taaggctaaa aaagaaaagc agccaagagg tgatggagaa
      481 acaaaacgtg tatgaccgcc aagtgaagag gaaaaccttg agcattttcc ctcgctggtt
      541 tctggctgct tg
//
LOCUS       KCHQ01000050             476 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 5390cha ultra-conserved
            element locus uce-200, sequence.
ACCESSION   KCHQ01000050
VERSION     KCHQ01000050.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5390cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-200"
BASE COUNT          144 a           99 c           92 g          141 t
ORIGIN      
        1 acttcctgca actttcgcaa cttcatattt tttagttgga aagtagatct ctaactttca
       61 gcaaatggca tgggacaaga agaggcaaga ctgccgacca gacagacgag cgttccactc
      121 tccagctctt aacaagcata gtaatacatc agtcaaaagc aataatttta ctattaatga
      181 aattccaatt tgccttcagt gcatttcacg ttgacatttt ccacattgca acagtgcttt
      241 gataaagttt ttaaaatgca aaaacgcatc taagaggcta aagaccagcc cgggtgtcag
      301 cgtgcctggc agaggactat ggtacttaat ttttatcgcc atgtgcccgg ggcattgaaa
      361 gcctgaatgt taacattggc tccattttca ttatcatcgt atgattatgg attttactgc
      421 atttagctga taatacaact aggagctcac cttaaaagaa gttgctggaa ggtttc
//
LOCUS       KCHQ01000051             273 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 5482cha ultra-conserved
            element locus uce-71, sequence.
ACCESSION   KCHQ01000051
VERSION     KCHQ01000051.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 273)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 273)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5482cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>273
                     /note="ultra-conserved element locus uce-71"
BASE COUNT           64 a           81 c           54 g           74 t
ORIGIN      
        1 tatgcagata tatcattgtc aggacctcct cccgccttct cttcctatcc ttctttcttc
       61 ccctctctcc atgtctgagc ctccactctt gtcagttgcc ccagcacaca attactgtgt
      121 gtgattgcta tcaggcggga cggtcgggga ggctcccaaa ttagggccta aataggattt
      181 cctacatggc gaagggcaca ggcctggaca tggtaatgaa agcctataca tcacaatcag
      241 gccgacaatc ctattcatac tgcaacacat tac
//
LOCUS       KCHQ01000052             488 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 5524cha ultra-conserved
            element locus uce-70, sequence.
ACCESSION   KCHQ01000052
VERSION     KCHQ01000052.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 488)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 488)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5524cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>488
                     /note="ultra-conserved element locus uce-70"
BASE COUNT          147 a           91 c          132 g          118 t
ORIGIN      
        1 caacagccaa ttttctctca attaaagcat gatattagca ctcagtaggg cataaacaga
       61 aataaccgta cactactgaa tatcatgcct tgattatgag cttaagagtg ggtgtacaga
      121 tggatccagt ttctatactc ctattacact gctggtgttt tttatgtgtg catgtctgtg
      181 agagaacggg agagggaatc actgcctgcc tgtgcatgag cgtgtgtctg tgtaacactt
      241 tggcagcagg gaaagctgga agttatcagc tctatcctgt taacacctct ggaaagggag
      301 ggcaggggga aaagaaagac aaaagtcaca ggtatagaag gcagagaaag tgtagcatta
      361 cattgaaagc cagtcagtgg tgatgccagt tggccaaagt tagcaggaag ctgtcctagt
      421 aaatggcagc agctgctcgc agttcgagag agcatgtccc agtcagagga gaaaagcgat
      481 ggcatcta
//
LOCUS       KCHQ01000053             366 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 5587cha ultra-conserved
            element locus uce-73, sequence.
ACCESSION   KCHQ01000053
VERSION     KCHQ01000053.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 366)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5587cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>366
                     /note="ultra-conserved element locus uce-73"
BASE COUNT          121 a           69 c           74 g          102 t
ORIGIN      
        1 catatatgca cacagaaaat aaatttaatg ttgtcacttc cttcaaagcc atcaatgtca
       61 agagagacca ctggcaattc aaagtaatca ggaagcctcg taacaaaaat aaatttgggg
      121 cttgacacgc tgttggaaaa gaatagcaat cagcaaattt aatgcatttc tgatgtatat
      181 ttaaggctgt gacactaggc cacagatgta catgtgttgg gtttctattt tgcaaaagat
      241 atggttggtg ataacctatt atgggacatc gtcagcttcc ccaccgcctc agcgtcggat
      301 aggaaaaatt ccatcacttg ctctatccag gagatgtaat atcgaaacaa attatggctg
      361 gaattg
//
LOCUS       KCHQ01000054             656 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 5674cha ultra-conserved
            element locus uce-72, sequence.
ACCESSION   KCHQ01000054
VERSION     KCHQ01000054.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 656)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5674cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>656
                     /note="ultra-conserved element locus uce-72"
BASE COUNT          171 a          169 c          124 g          192 t
ORIGIN      
        1 tcttatcctg gggttatcca catatgacac ctgccaggac ggcaccgtag aaggaatctg
       61 acatttcatt ctcacctgca gatatgacct cgtctccttc cccaacttaa ccttgagtgt
      121 ttacactcat ttgcgacctc cgagtgtcca cagccccaac gcccaaaacg caatccaaat
      181 gtcagagaga gcgatgaaat cagaccagtg tgagaccacc gagcagaggt tcatttttat
      241 tagttcagtg tgagctacta gcttaaatct gctttttgtc atcctgtctt gcccagtgtt
      301 tcaggcatgt ccaggatcag gccacggggc acaggggaat ttgttgcaac tgacattttc
      361 cgcagtagtg ttcttcctct ccttcctcct cttcttcttc tttttttcag gctcagtgaa
      421 ctgagggaaa atgacattta attacaggag agcagtcacg cagttcagct aattacgatc
      481 ccgggagttc agtcatcata tctaattaac tttcactttc atgaaagctt aatgcagcgc
      541 catagccagg cgctgcatgt gccacacttc aggaatattg acaactcttt ggaaattaat
      601 ttcaaaatag ctttctctct ctctctcgtc ctcttcattt gcaaaaaaaa aaaaaa
//
LOCUS       KCHQ01000055             271 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 5858cha ultra-conserved
            element locus uce-77, sequence.
ACCESSION   KCHQ01000055
VERSION     KCHQ01000055.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 271)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 271)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5858cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>271
                     /note="ultra-conserved element locus uce-77"
BASE COUNT           82 a           56 c           94 g           39 t
ORIGIN      
        1 cgagaagaga aagtctcaat gacaaaaggt cggggcagct gggcttaggg cgacggggac
       61 caaagggagc agcgggataa tctgctaaag cccagaaagg agagattcag catgcgcgcc
      121 accctcgtag ggcctaagag caaatttgca cataaataag gagccaactt tgctttgaac
      181 gggaggtcga gggagaaagc gtcagaaagg gagagagagt cagagataca gagcgaagtg
      241 ttggagccgc agctgcctgc tggctggccg c
//
LOCUS       KCHQ01000056             221 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 5936cha ultra-conserved
            element locus uce-76, sequence.
ACCESSION   KCHQ01000056
VERSION     KCHQ01000056.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 221)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 221)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="5936cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>221
                     /note="ultra-conserved element locus uce-76"
BASE COUNT           55 a           48 c           83 g           35 t
ORIGIN      
        1 taatgcaagc gtgtgtagct cacgatcgtg tattgaggcc tggcatagtg tggtgcagtg
       61 cagagtggag aggagagaca gctgccctga cagatgccgg gaggcaggac cccactggga
      121 agcagaggga gggagctggc actgtctcac cccagcggaa acaccatagg ctgcagagga
      181 agtgggcagg gggacaaacc aggggctcag tatgcatgtg t
//
LOCUS       KCHQ01000057             245 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 6120cha ultra-conserved
            element locus uce-78, sequence.
ACCESSION   KCHQ01000057
VERSION     KCHQ01000057.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 245)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 245)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6120cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>245
                     /note="ultra-conserved element locus uce-78"
BASE COUNT           61 a           66 c           60 g           58 t
ORIGIN      
        1 agacactgat aaactcccca tgcacccaca caccgctaat gggcaaccct taaggagtgt
       61 gagtgtctcg tgcggcgttt gattcaacat ttattaaccc cctcacacac tctctctctc
      121 acatacgaca cacactcatt tgagccccag gaagagcaag ggtatagttg gtggcattcg
      181 cagcgttagt gcggggtttt gacctggccg ggctgtatta atcatggccg gtagtagaaa
      241 gcgag
//
LOCUS       KCHQ01000058             360 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 6318cha ultra-conserved
            element locus uce-376, sequence.
ACCESSION   KCHQ01000058
VERSION     KCHQ01000058.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 360)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6318cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>360
                     /note="ultra-conserved element locus uce-376"
BASE COUNT          101 a           80 c           71 g          108 t
ORIGIN      
        1 ctgctgctgg tggggcagca ccgctttttc tatcttgatc tgaactacta accaagtctt
       61 agagagatca aaattcaatc ccgttctgag aaaaaaagag aaatgacgtt atttgaatat
      121 gtgcccaaaa tccttaatga ataacttagg acgagtagga ggcaaatgct gccccagctg
      181 tttcctgttg aaaatgtctg tgtaatgtag ataaatgtga gggattttct ctctaaatcc
      241 gtctcctgtt cgctaaatct cacttctcca aaacgagcct gcgcaatgga acaaagtcgg
      301 aatattgaga tgtgacattg cccgcatctc atcctctttc tccccgtttt taatgacttc
//
LOCUS       KCHQ01000059             362 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 6420cha ultra-conserved
            element locus uce-997, sequence.
ACCESSION   KCHQ01000059
VERSION     KCHQ01000059.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 362)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 362)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6420cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>362
                     /note="ultra-conserved element locus uce-997"
BASE COUNT           85 a           77 c           98 g          102 t
ORIGIN      
        1 tcggaggtcg ccggttgggc ctgcagtaaa agcgcactat ttaagcgaca atcggccccg
       61 cgctcttcag acgctggcta atgaagctgt ctgtctgggc tatttacctt ctcttaaatg
      121 gaaggggaga gatgtactgt aagagacagg ctggagagga tctgcctctc gctcctgtga
      181 aataggacct gcacatgcct caggaatgta taattggttg gcgcagccaa agctggggat
      241 ccggtgctaa ttaaatgact tgtttaaagc ctatctgtct ttgtttggga ggctctgggc
      301 ttcagaacaa tgcattgtaa atgctgttgt caaacaaaca ttcctggtta tcctttgatt
      361 tg
//
LOCUS       KCHQ01000060             494 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 6692cha ultra-conserved
            element locus uce-994, sequence.
ACCESSION   KCHQ01000060
VERSION     KCHQ01000060.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6692cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-994"
BASE COUNT           96 a          147 c          114 g          137 t
ORIGIN      
        1 caaccagctg tcaaacagat ccctgcctgt tgaggttaac cttaagtggg cctgagtcga
       61 ggccagagcc cgggttttga gtggttctca gggtctaggg cctcgggcac aaaaggaggg
      121 ccaaaagcat ttctttgaga gcaccaaatc tcctgtctcc tcttctccct ctccccgggc
      181 ctccccttcc tccatcccta cctccctctc tccctccatc cctcccctct accccctcca
      241 gactctctgt ctgcgctgac accgccttta ataaggggga gtggggtgca ctgtttattt
      301 gtgtggtgcg aggttaaaaa cttccccctt aattgacatt ccggtaacac tttccaataa
      361 tggggcgagc aatttccttg aaattgatgt gtgtccaccg caaggaaaaa cactgcttct
      421 agctttcact gacccatgga tgatctactc atgcactgtg gctttgtctg agtgcgtgtg
      481 tgtgtatgtg tgcg
//
LOCUS       KCHQ01000061             584 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 6883cha ultra-conserved
            element locus uce-1128, sequence.
ACCESSION   KCHQ01000061
VERSION     KCHQ01000061.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6883cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>584
                     /note="ultra-conserved element locus uce-1128"
BASE COUNT          145 a          155 c          115 g          169 t
ORIGIN      
        1 ctctctctct ctctctctct ctccgtcagg ccttgacacg tccttgttta gctctcctct
       61 cctcgacgcc cacccccacc ccaggttttc ccccctcttt gattagccga gacatttgca
      121 tggtcactac acatttttca ttttagaagt cattatgcat tagtggctcc tgatcgcccg
      181 ccttgactaa tcctgatgaa ctgaaaatca cagctgaagg tcaacttcca gccggccccg
      241 ctgcacattc atattcatat tcaaacaaat cctgcctcca ttgttcatta gggtcttaga
      301 gagaagggac tccatctaag gtggaagagg cggaggagga ggaggaggat gttgtggtac
      361 atctcttttc ttctctggac tcctctatgc aagggtgcaa aaaagaaaac gcattcacaa
      421 taagcgaggt gctgaacaaa agccgtcaaa agttgcaaat taaacagtcc atgtgtaatt
      481 atgcaaatgc tctgcttaca ccttcaatgt tattaaccct taaaggtaca tttgctaggt
      541 aagtaattac ccctgcagtc actcctggtt ttgtgttgga tgcc
//
LOCUS       KCHQ01000062             545 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 6982cha ultra-conserved
            element locus uce-858, sequence.
ACCESSION   KCHQ01000062
VERSION     KCHQ01000062.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="6982cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-858"
BASE COUNT          170 a          112 c          108 g          155 t
ORIGIN      
        1 attcaaacat atcagggatt attaagagac ctgagaacaa ggtcaaagac ttggagaaga
       61 acacagagca agttaaactt aacttccact tcatccccga ggctctgaaa atacttagga
      121 gatagttgag gcaggctctg ttgaaagctc ccccgccggc acgcaaagct ttacttttga
      181 tgttaattcc ttgaaagctg tttctttagc tggggattag tgcatgaaga gctaggctta
      241 ccatgctctg gctaataaag atgaaacatc taacacaggt actcgtacat acactcgcct
      301 gggaacagtg cctataaagt tgccttaatt atagggaact cacttcgctt cagtaagtat
      361 aagaatagga cgacatttgt actttgaaaa tactgtggta ttaaatgttg aaaatccttt
      421 gtactcttta gacacgagtc ttgagataaa ataatgagta tataggcaca tcactttctc
      481 agctcatgcg atcaaagctg cctgtatttc atacatttca tagtatgctc tcagcctcca
      541 cagct
//
LOCUS       KCHQ01000063             441 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 7084cha ultra-conserved
            element locus uce-859, sequence.
ACCESSION   KCHQ01000063
VERSION     KCHQ01000063.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 441)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 441)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7084cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>441
                     /note="ultra-conserved element locus uce-859"
BASE COUNT          125 a           81 c          122 g          113 t
ORIGIN      
        1 gcataatcgg gggtctgggc tgcagctcgg tacccggggg ctgcgttttt attgcgcgtc
       61 tcttcgccgt tatcaatttc agcagcgcgc ctgacttttt aaaaggagga cgaggccggc
      121 tgcttctgaa taatgaatga cacgctttta tattgtcgct aaagtgcccg tgatgttaca
      181 atatgaaaag gcagcggtaa gtaatagtgc atttaaaggg gatgtagtgt attattatga
      241 tgtaaaagag aaggagagag gcggtagaga gagggagatg agtggatagc agcacccaga
      301 gagagagaga gattgtttta ttacaataag aggagatgag tttgcctcgc agcgaaatgg
      361 ggaccagtta atgaaacttt accgcagcta acgatttccc ctccctcgct ctaaaaaccg
      421 cccttatgaa atatttaaac t
//
LOCUS       KCHQ01000064             355 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 7171cha ultra-conserved
            element locus uce-856, sequence.
ACCESSION   KCHQ01000064
VERSION     KCHQ01000064.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 355)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 355)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7171cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>355
                     /note="ultra-conserved element locus uce-856"
BASE COUNT           77 a           95 c           94 g           89 t
ORIGIN      
        1 gtctgctttc cttactgtca gcttctttct tgatgatgtc tcggggtttt tagaaactgc
       61 gtctctgact cgacggcgcc actcagccgc cccctctcga ctgcgcagaa tgaggcactt
      121 tgggaaacag taaccctttc aggctctgcc cggagagtat tttagaagcg tgtgaaaggc
      181 aatacgccgc cctggctcca gccagttagg tgcgcacctt ttagaaacag gccctgccag
      241 ccagtcagat cagtggttct caaagtgcgg tccggggacc tccaggaggt ccttgtgggg
      301 attccagcgg gtcctcagca aaatgaggaa tagttaaatt tcagcaaagt catta
//
LOCUS       KCHQ01000065             649 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 7269cha ultra-conserved
            element locus uce-857, sequence.
ACCESSION   KCHQ01000065
VERSION     KCHQ01000065.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7269cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-857"
BASE COUNT          126 a          208 c          118 g          197 t
ORIGIN      
        1 ctccagatct gaggtcaatt tcgccccctg attgcacgta tttttgtgtg ttgtctgtgg
       61 ggggagggag agtttactgt tgctccactg aagccatcat catcatcacc tgatgagcag
      121 aggctgaagc ccgagtctgt ttcgcccctt tgttttttcc ctccaaccac cctgcctttt
      181 actcctccct gcctcccctc cttttctccc cctcatccct atctctgctc ctcttccacc
      241 ccttggccct ggccctctgc ctgctctttc gctcaccccc catgttcgca aatcacttct
      301 tcccgtgtca gcaggtaaat tgttttgtcc tcccattccc tgctttcatt accttgtgta
      361 aattaagcga tatgtcgtcc accggtgcgc gccagagcac tcactgcgcc aacgccaaaa
      421 tcatgagatt tggcataata aatgaagaca aactggcagt agcagtgctc ctctccgcgc
      481 gggctcgcct tcattattcg cttaacttgc cggagaaaat gacttaaccc tgacctgtgt
      541 atttcgtccc atattcactc cagataaaag cctttttaca gcgcacaaca atttatattc
      601 cagcaaagag gctgcttttc tctgtcagtt ttccaatctc agctcctga
//
LOCUS       KCHQ01000066             443 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 7369cha ultra-conserved
            element locus uce-854, sequence.
ACCESSION   KCHQ01000066
VERSION     KCHQ01000066.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7369cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-854"
BASE COUNT          128 a          103 c           95 g          117 t
ORIGIN      
        1 ggaggcttgg ggactcaaac aaacgctgga gagtggcaag tttgcatttg cccataccaa
       61 caagctccta tctcattaac aaaccgctga aataaaagag tgcttttttg gctcacagct
      121 ataaaaaaaa aattatcata gtgatgatgt tcctcagccg tcaacagagc tgtgataacg
      181 ttgtttgatg atgactttcc catgaatgtt aagcagccgc cgcggcagag gaaaggagct
      241 tatcagcgtc taatgcccat ctctaattcc tgcccttctt gaactagcca ttttctaaca
      301 gcgttaactg tcaaatttac atcccgtctt aatgccacta aagagtacgg gggatgaaga
      361 gtaaatgaca gcagtgtaat gaggaaggca aggcattcct tctcccactt tctctccccc
      421 tctctttctc tgaggagaag gag
//
LOCUS       KCHQ01000067             800 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 7466cha ultra-conserved
            element locus uce-855, sequence.
ACCESSION   KCHQ01000067
VERSION     KCHQ01000067.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 800)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 800)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7466cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>800
                     /note="ultra-conserved element locus uce-855"
BASE COUNT          249 a           87 c          140 g          324 t
ORIGIN      
        1 tttttttttt tttttttctt tcttcttttt gtttttaaaa tgtgccactg ttgagctgcc
       61 tcatgttaat ggtgctaaga aagctgacaa ttgttttctt tttttgggtt ttgttttttg
      121 ttttcccaga gttaacaaaa aaagaaaaaa aaagaaatgc aaaatagatt aggtacctaa
      181 ccctctttat gaatgtatat tacaatgtta tgtttgatgt attcacttca tgattctttg
      241 acattgattg gaattacttt tgctcttttc attaaaagat taccgagctt tatatatact
      301 gtctagagtt gttaccagaa ggaatcttaa tgaactcttg acactacaaa atcttgtata
      361 ttttttgtgt gccaatttgt aacatatttt gtaagtgtat atttttctta gaaagtgctg
      421 tgaagtattt gtgtgtgtgt gagtaacctt ttatgcgcca ctatgggcag tggaaaggat
      481 atacaatgac aagtttctgg ttttaaaaac caaaatatga aagtatcaac agaaaactag
      541 aaatatttac attttgttgg gagttttgta ataagaccat gatcttgttg tgagagtgtt
      601 gtgttactgt gcaaaacaca aataagcaaa gaaaaaaaaa tgaaaacttg gaaaaaaaaa
      661 tataatttgt gaacaatttg ctgttttata gattttcatg taaattattt gagtattatt
      721 ttgttttttg ttttgttgta actgttgcaa aggttttaaa tatttgtgat caagcctgta
      781 tggtgataat gtaatattgg
//
LOCUS       KCHQ01000068             403 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 7565cha ultra-conserved
            element locus uce-986, sequence.
ACCESSION   KCHQ01000068
VERSION     KCHQ01000068.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7565cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-986"
BASE COUNT          114 a           74 c          100 g          115 t
ORIGIN      
        1 tctttgaaaa tagcctttct ctgcaatttc cctgtgacat gaagatcacc tccaattctt
       61 tgcatgttct cctcttctct tccctctgga tggggaggtg tgtgggtgta ttacattacc
      121 aaaacaaaaa caaacaacag caatattaaa cttttgcaac cacaatagag gaggggataa
      181 aaaacagagg gtcctcgact tcttattaat tatgcaagat tagtctaatt ataattcagc
      241 aaatgaatgt gtggcagaag gtgcgaggcg acggggctgg gagatttgca tgttaagtgg
      301 gcagggggaa gcggctaatg catgctaata tatgcgtcaa tgtctcgctt taatttcagc
      361 atttgcagct gtgtgcgtcc gaactgaggg gggtgaaaag ttg
//
LOCUS       KCHQ01000069             225 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 7660cha ultra-conserved
            element locus uce-850, sequence.
ACCESSION   KCHQ01000069
VERSION     KCHQ01000069.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 225)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 225)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7660cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>225
                     /note="ultra-conserved element locus uce-850"
BASE COUNT           28 a           62 c           58 g           77 t
ORIGIN      
        1 ctctctctct ctctctctct ctgcgtcttc ggtcctgtcg tcatttcatc ttacctgggg
       61 ttgtagaggg catgtgcgtc tctcatgtgg ttggcctcta gtggatcgta gctctggtgc
      121 atcctccagg cgccagcgcc gcatttgcta taggttgact tggagttatc ttcactgctg
      181 ctgttcacca atggtccctt cgataagttc attctgtagg cgggg
//
LOCUS       KCHQ01000070             497 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 7823cha ultra-conserved
            element locus uce-1144, sequence.
ACCESSION   KCHQ01000070
VERSION     KCHQ01000070.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7823cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-1144"
BASE COUNT          154 a          106 c           90 g          147 t
ORIGIN      
        1 acaaaaggtt tacataaatt atccccgaat atttgaacaa tagccgccct tccttgtggt
       61 ttccatcgct aaaaataaag aactttgtgc accgaatcct aaaatgtagt attttcttta
      121 aacgtatgaa tatatttgcg agtaaagtta aaaaaagaag aagaaaaaaa gcttcagtgg
      181 gagcaatttg ttaaaacggg ctttttaagt attgtgagta taaagctact tggaggttct
      241 ttgtatgtaa atagggtgta aaaaaggccc tccccgtctt tgtaattaat tgacacgtta
      301 taccactcat catgctctga agcaccaatg gtagaggctc ggatctcccc aaaacccaca
      361 atttcacatc tgcaaacact gtcttcatcc acttgactcc taagacccgc ccacacgtgg
      421 ccaacctttc gcgtttttta atgctttttc actgcaggtt catgtgttga gaccaacctt
      481 atatggactg agcggac
//
LOCUS       KCHQ01000071             634 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 7871cha ultra-conserved
            element locus uce-184, sequence.
ACCESSION   KCHQ01000071
VERSION     KCHQ01000071.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7871cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-184"
BASE COUNT          184 a          141 c          159 g          150 t
ORIGIN      
        1 tctttctaga tggcagacaa catatggagg gcatttcaca agtgtaaaat ggcactactt
       61 tatgtgcttt gtcttttaaa tgctgttcta ttttcgctaa ctgcatggta tgacagagga
      121 aaaacaataa attccccgag gtggacaagt gctctgaaaa tcagggaatg agagccatat
      181 gagaaaacaa ggaggaaaaa tatcacaaca ttatggcgac ggcgtaggct aactttcact
      241 cagctcaaaa agtctaatat gatgttcccg cccttcccag catgcagaag tcccgctggg
      301 ggcctcaatg tgatcagcag catccccacc acgtctcctc attattgagt aaataggttt
      361 gggcatgtcc tcagtaaaca aagccaagac tgacagttaa gggagtgagg ggagtgggag
      421 gcagcctcgt tcccaattag agtcgcctca ggcaaaactt taaagaggag atcaatccta
      481 cagatcgcta aactgatcct gtcacaggct ggggatattt aaaccgtggt gcagagcaga
      541 gcggtgcagg gcagttctca gtacagtttg actgtgtgtg ctaatgactt gggggtaggc
      601 tctctcacca ggacacacac cccacagcga ggct
//
LOCUS       KCHQ01000072             595 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 7951cha ultra-conserved
            element locus uce-1146, sequence.
ACCESSION   KCHQ01000072
VERSION     KCHQ01000072.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 595)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="7951cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>595
                     /note="ultra-conserved element locus uce-1146"
BASE COUNT          153 a          158 c          115 g          169 t
ORIGIN      
        1 cacttaggag agaaggggaa gaagttttcg ttgcacaatg ttccttgagc caaatgtcct
       61 aattcatagt tgttagcagc tcacacacac attaatcaca cacattaatc tgtattcagc
      121 ccgggtccgg cctgaccttg agcttttcac ctgaggtatg cgctttgcat ccattaagtc
      181 gacgtggtgt aaaaccatct cacagcatca gcgtgaagtg tctattacca ccgtcttatt
      241 tcctgtttat atggcaactg cctcaacatc ctgtttttaa ttacttctct ccagcagcag
      301 atgcttctca cagcaacctg ctgtggatta ctcccctgag aactaatgtg ctgtgacaga
      361 ccccactttt ccaatcaata actcgcccta aatctgccat ctctctgcct gccaaacaca
      421 ctcccacttc taatggcaca tcattttctt taagggggtg taattgcaga ctgtggaaag
      481 ctgtagccct ttgtgttcca actacgcaga tactgtaaag gaatctaaag tacagaaatt
      541 acagcacagg aagtgatggg ggctttacac tgtgctcggt ctcgccacca ctgcc
//
LOCUS       KCHQ01000073             412 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 8045cha ultra-conserved
            element locus uce-1028, sequence.
ACCESSION   KCHQ01000073
VERSION     KCHQ01000073.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8045cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-1028"
BASE COUNT           91 a           74 c          111 g          136 t
ORIGIN      
        1 cctttctttg gctttttctc ttatattttt ctttcttggg ggggaaaagg gaagaaagct
       61 gaaagaactt ttttttttcc aactctggga gcgtttagac ggtcgagggg gttttgtctg
      121 ggaacaaaac gtgggttggg aggttttgtg agagtgttgt ttgttgaagt ggagctcagc
      181 aaaagcggct gctttccctc attgtgatga aagcaatcag tggtatttgg aaaactgtta
      241 gcattgtgca cttcttctgt gtccgttgtg gaggatttct tttcacaagg tttttttcag
      301 ccgatccagc tggccggagt gaatagcact gcaatgtgta cacgctttgt ccctccaagc
      361 ccttcaagta gcccacattg aatagagtga gttgacactg catgacagtg aa
//
LOCUS       KCHQ01000074             634 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 8221cha ultra-conserved
            element locus uce-1141, sequence.
ACCESSION   KCHQ01000074
VERSION     KCHQ01000074.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8221cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-1141"
BASE COUNT          180 a          182 c          130 g          142 t
ORIGIN      
        1 aaaacatcca atcacatgac aattatatgg tcatcaccaa cacacaagaa aacacaaagc
       61 caccgggacg cacacacggg ctcaggccgg ctcacgagac cgcccgcaca ctgaggcacc
      121 actatgagag gaagagctgt gaaagggtta aagatgctta ctctattccc caccctgtgc
      181 ctccaaaaat cacccccagg gccagaatgg tccctgctac tgcccctatc agcctgttag
      241 tggccacgct cactgtgcaa agggaaaagg agcattatta ccaccctgtt aaaaacaaac
      301 agcaggcttc tgcttcagag tcatggatga tgtgtcacgg ttccctctgg gacgcttccc
      361 acccccttaa accacctccc cgtccccctg tggtcaaact atcaggtgta cagcagaact
      421 gtgtgttcat cttctgaatc aaagtaaaca aatgtatcac tgctttctta ttctccttca
      481 gccgccattt tacatgtgaa ggctttacaa ccccagtaca cctgtgaagc tggcgtctac
      541 gaatgtgcgc tgactcaggt ctaacagtgt gactgagaat gacattgcag tattgcagaa
      601 caacatatac agtacatgag tcagaatctt ggct
//
LOCUS       KCHQ01000075             306 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 8313cha ultra-conserved
            element locus uce-1142, sequence.
ACCESSION   KCHQ01000075
VERSION     KCHQ01000075.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 306)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8313cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>306
                     /note="ultra-conserved element locus uce-1142"
BASE COUNT           77 a           67 c           81 g           81 t
ORIGIN      
        1 tttatttagt gattcccccc aggggccctg agctggagcg agaataacaa tacttgagcc
       61 catctgttcc tgtagaacca gccccggcta aattaccaca cgctacgagc ggctggcata
      121 tgctgtggca taaagctaca agagggcatt gtgtgccagc tgttctgttg acaaatactt
      181 atctggcact tctgaagtca gcttgctaag ctggtttcaa gtttgactaa aaactaaacg
      241 gggtaaggtg tggaataggg ttcctgtggg ggagctgcat gtataataca tgccgattta
      301 tccggg
//
LOCUS       KCHQ01000076             555 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 8466cha ultra-conserved
            element locus uce-1023, sequence.
ACCESSION   KCHQ01000076
VERSION     KCHQ01000076.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8466cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-1023"
BASE COUNT          170 a          117 c          106 g          162 t
ORIGIN      
        1 gcatcaaaac acatccattt ctctgcaaag ttgatccaat tattgtcagc cactcacaga
       61 tagctactat gctttactcc tttcattcca ggctaaattg ctcttcccct ttttcgccga
      121 tacggcaatc ggtcataaag ggccagccat cattagtgct gtttgaattg gagccctgta
      181 gtgtttggtt aagagggtaa atgcaaattt gatgaaagaa taaggctgca tttacatatc
      241 agcctcagct cacatgggga gggtaaacat tctgtttatc tcaagtgtca ttttatgatt
      301 tcagtggaat ataaaaccga ccttggccca gtcggagcaa aagaccgagg aaatttactg
      361 ttgtttaaac acaatttatt gaagtagaac ttgtcaacaa atcttctaga actcggcaaa
      421 taaaagaaga aaatcagcat gttttcgcca caactgcgtg agtgagcgct catttcctct
      481 cccaaataat gcacaaatgg tcatcagtgt gaagcaatgc tctcatttaa tacctgtgaa
      541 caaaacgtgt ttaag
//
LOCUS       KCHQ01000077             313 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 8549cha ultra-conserved
            element locus uce-1022, sequence.
ACCESSION   KCHQ01000077
VERSION     KCHQ01000077.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 313)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 313)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8549cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>313
                     /note="ultra-conserved element locus uce-1022"
BASE COUNT           87 a           63 c           85 g           78 t
ORIGIN      
        1 gacccccgcc gctcccatgc tgcgcgaaca atgggaaggc atcctgtctc tctgtggggc
       61 agggctgcac ttctctgggt ttcatttgca aatgaattct tggccctgat gaaagtgttg
      121 aggggccaga gccacaatga aagggattca tagaaaaatg caatttgtaa atcaacttgt
      181 atgttaaaca gcaagatttt agtgtgacaa agagggaaaa gaataaggaa agtctggagc
      241 acagcagtgg ctctgggggc agggtgtcgt cctgcctttt cgctcatctt gttcgtcaaa
      301 atggaaaatt aaa
//
LOCUS       KCHQ01000078             281 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 8758cha ultra-conserved
            element locus uce-1148, sequence.
ACCESSION   KCHQ01000078
VERSION     KCHQ01000078.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 281)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 281)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8758cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>281
                     /note="ultra-conserved element locus uce-1148"
BASE COUNT           81 a           66 c           72 g           62 t
ORIGIN      
        1 gtgccaacac atactctgag tgcttctgga tagaaacaga gagtgacagt gatagaattt
       61 actgtgatgg tatcagcaaa gcagccatca cagctttggc agattggaag gccatcagga
      121 cccatctccc tggctctgat cagtgttcgc atcctgacat cagcccgcga tgttaactcc
      181 aggccctgaa agggggctat gaaccatgat cagcgatatc aagccaccag aaatagaaat
      241 ccattttcct gcctcgagga gaaggggggg tgaatgaata t
//
LOCUS       KCHQ01000079             276 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 8859cha ultra-conserved
            element locus uce-1025, sequence.
ACCESSION   KCHQ01000079
VERSION     KCHQ01000079.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 276)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 276)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8859cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>276
                     /note="ultra-conserved element locus uce-1025"
BASE COUNT           62 a           75 c           79 g           60 t
ORIGIN      
        1 ccaaggacct tcggccaacc tgtcatcccc gatcccagtg cgccgcggtg gctcagacca
       61 cgggcgtctc ccacaggagg gggtggggtg gccctggggg aggagagaga ccccctcgga
      121 tcatggttgt catgccgact gcttcgtctt acgtaccatt ccacatcacc caggctttgg
      181 taaatgtagc tggtcgctgt tagttggttg caagggaaaa aagaagccaa gttaatgcca
      241 aggcctacag tacttacatg tacagatttc tatgaa
//
LOCUS       KCHQ01000080             350 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 8954cha ultra-conserved
            element locus uce-1024, sequence.
ACCESSION   KCHQ01000080
VERSION     KCHQ01000080.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 350)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 350)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="8954cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>350
                     /note="ultra-conserved element locus uce-1024"
BASE COUNT           97 a           82 c           86 g           85 t
ORIGIN      
        1 cttacaggca ttgtgtggat attctattag ccatatctaa agtgtaattg taccgttggg
       61 gggggacagt gttgtcgggg tgccaagctt tctctcagcg actagcgaag tgtggtaatc
      121 tcacacacca tctcattaca gtttaaaccc ccagcagctg ctcgcattag acttttatta
      181 cacgctgccg ctcacagctg tgctggcata tccctggaca ggatggtgag agacgggaac
      241 aaagacagac agacacaggg attccagcac aacatttggc tcccatcaaa aaagtggaaa
      301 tatcgaagca gagggttgta atgaccctaa cagcctctca gtgtgataac
//
LOCUS       KCHQ01000081             407 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 9046cha ultra-conserved
            element locus uce-728, sequence.
ACCESSION   KCHQ01000081
VERSION     KCHQ01000081.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 407)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 407)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9046cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>407
                     /note="ultra-conserved element locus uce-728"
BASE COUNT          144 a           59 c           79 g          125 t
ORIGIN      
        1 ctttgaaaac ttccacagat ccagacattt atacttcctg atttctcgca tcatctctcc
       61 aagatagtga taatacgatt tctgtgtttt tcgctgttga gaaacaaact ggattatgaa
      121 cagatcacta cataaacagc tttctaaaag gaggcagcta ttttaaaaaa ggctgaagaa
      181 atgcaaagag ggatttaaat tttaatttga atttattcca gcaagtgaaa ggttcttttg
      241 agaggggatt tcggcaaaga tgatggtatt taaaagtgat aaacaagcat ctaaacctcc
      301 agtggaaaac agtcattttg cttctttcta gtgtagggga ggaattgggt ttgctatggt
      361 cacatccaaa aaataagaat aagtaatagt agtaattaaa atgtaaa
//
LOCUS       KCHQ01000082             470 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 9143cha ultra-conserved
            element locus uce-729, sequence.
ACCESSION   KCHQ01000082
VERSION     KCHQ01000082.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9143cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-729"
BASE COUNT          125 a          103 c           95 g          147 t
ORIGIN      
        1 gtgtgtaata gcagaagtgt atcaacaatg ttagactaaa aaggtttggt gagatttccc
       61 tgtttataaa aaaacaaaag tcaaacgtga tcatgtacat tagaagtgcc ttgatccagc
      121 aaacctctca aagacatcgt cagtgtcaca ctgtacactc gtcatcctct ttgaccgccg
      181 tgctcaggct tttaattaaa tgcagggggc cgggatgtgg aaagaagcgg ctagaggcta
      241 attttttatt ggggctgttt gttgcttgac ttttttttgc tatagtatgt gaactttccc
      301 aatgcaaatc tccttgtttt cctttttcca gggtttattg tcatcccaaa accaagccag
      361 ctctcccagt ggaacagtag tatagccaca atatttctgc tgctaaagaa ccctgcaacc
      421 cagagtctga tgctgctctt caccctgcaa gcattgcaag ttttcctttt
//
LOCUS       KCHQ01000083             264 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 9306cha ultra-conserved
            element locus uce-271, sequence.
ACCESSION   KCHQ01000083
VERSION     KCHQ01000083.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 264)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 264)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9306cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>264
                     /note="ultra-conserved element locus uce-271"
BASE COUNT           88 a           52 c           49 g           75 t
ORIGIN      
        1 aacttcaaac acctttcctg tgcatttagt gtaatgaaca atgccttaat tgagattggc
       61 taattaccca atttcaacat aattaatatg atcctaatta gcatatgtaa atgggacgtt
      121 gcataattga gaatccctgt tttgaattag atggctctaa agtgaacccg cacgtgaaaa
      181 ggtacaaagc agctattaag agtttgatgc cgcattaaaa caggccatca ctcaatgtgc
      241 gctgatgaaa cgctcagcat cacg
//
LOCUS       KCHQ01000084             537 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 9488cha ultra-conserved
            element locus uce-486, sequence.
ACCESSION   KCHQ01000084
VERSION     KCHQ01000084.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9488cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-486"
BASE COUNT          141 a          110 c          113 g          173 t
ORIGIN      
        1 tgactaaatc atgtgtgtga ttctagaaag tgaattttac tatttgtgtc tcctttgggg
       61 caatgtagcc tcaatggatc gatcacagct ccacctaaat cttggaggta aatggtatgc
      121 atttagaaag tcattatgct gtcaattgaa catctccccc tgcactttgt gtcggggacg
      181 tccgtaatga agtttgtagt cattatagta gttgaatata ctaatcttgt gatgtttcct
      241 ttccctatca tgtcgtgtta ggggtgatga ctctcagcag acaatctcct ccattcagga
      301 gcggtgccac caagtctgtc cttgcttatc attaacaatc tgcaaataaa caggacagca
      361 tacattacat cacttgcggc tctgtgatca attccaggaa tgtctttgaa gctttgctta
      421 atgaacctac acagtatagc tgttgtgtgt agccagggca ctgaggcttc ataacccatg
      481 accttaatgc agtttttcct cattgatgac attgagaggt taccaaaggg gtatata
//
LOCUS       KCHQ01000085             220 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 9666cha ultra-conserved
            element locus uce-1122, sequence.
ACCESSION   KCHQ01000085
VERSION     KCHQ01000085.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 220)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 220)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9666cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>220
                     /note="ultra-conserved element locus uce-1122"
BASE COUNT           60 a           54 c           37 g           69 t
ORIGIN      
        1 cttattttga gggttgtgat cttttccctt ttaatctgca aagataaaag gtctcagctt
       61 cattagcatg tgttctctcc ccccagactc agattccctg caagcagcca gctcagcctt
      121 acagcctatt acccactctt ggggccatta aggtctaaca ttaatgatgt gtaattagca
      181 tatgatgaca aataataaca atgcactccc attcgatgta
//
LOCUS       KCHQ01000086             535 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 9755cha ultra-conserved
            element locus uce-722, sequence.
ACCESSION   KCHQ01000086
VERSION     KCHQ01000086.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9755cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-722"
BASE COUNT          136 a          138 c          148 g          113 t
ORIGIN      
        1 ttcctccgct gaaagctcat gctggcggaa atcaagtacc ccgaggctta cagcgcgcag
       61 cccaaggcct aaaaggtaat agcatgaaat atagatacgg aggtgacaga tgtttacagt
      121 gcgtcgcgag atggcattga gacacaacac ggtggctccc tccattggag aggaacctga
      181 tgagcgtata gcagagagat ggagtgatat aggaggtgct ctggcagtgt ttgcaggcag
      241 atcattaggg cccctcttta actcaacccc cagtgacaat ctattgctct cctcccctgt
      301 cagcgaatca ttatggtctg atcattagtg acatcgccac atgcccatca ctcaggctgg
      361 tgccatattg gcagatgaac agcctctgcc ccgggcccac taatctagag acttcagaca
      421 gggaggatga aggaatgttc gccgagcatc aaagaggccg gactggctcg ttttacggga
      481 tcaaacgtgg actcctcggc ctcagtgcgc gtacagagga gcgacggtag ctgcc
//
LOCUS       KCHQ01000087             227 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 9853cha ultra-conserved
            element locus uce-723, sequence.
ACCESSION   KCHQ01000087
VERSION     KCHQ01000087.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 227)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 227)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9853cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>227
                     /note="ultra-conserved element locus uce-723"
BASE COUNT           70 a           42 c           67 g           48 t
ORIGIN      
        1 ccagacacat ctcatcccct tcaatagctc ctcgtcaatt ccaggcttaa aattttatgg
       61 gataggatac tgtttgatgc agtctaccag cggtccataa cagcagtcat ttattgtgca
      121 ctgaaaagag ggggaagaaa tattatggcg tgcgaaaaag ggtgggtggg tggaagggag
      181 gtgagggaag gaagcccata cagtgccggg aaaggagaaa acacagg
//
LOCUS       KCHQ01000088             290 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 9939cha ultra-conserved
            element locus uce-724, sequence.
ACCESSION   KCHQ01000088
VERSION     KCHQ01000088.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 290)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 290)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="9939cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>290
                     /note="ultra-conserved element locus uce-724"
BASE COUNT           88 a           74 c           59 g           69 t
ORIGIN      
        1 aaaaggggga aaaaaggata aaataaaaac ttggatcatc gtgaaatgcc gtctgttctg
       61 gatataatca atagctgaag aaggatccag ttcagggttg tctctcatat ttcaatccct
      121 gctcttctgt gatcaataaa agtgagctga aatcaaagcg ggccctcttt actattgtct
      181 attcaacgtt agcagacaaa gactgaggag cctttgatcg ccctgtctgc agggcccaca
      241 gctaaacaca gaccccatcc tcccactccc acccaccacc tccaggtgag
//
LOCUS       KCHQ01000089             687 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 10033cha ultra-conserved
            element locus uce-726, sequence.
ACCESSION   KCHQ01000089
VERSION     KCHQ01000089.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 687)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10033cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>687
                     /note="ultra-conserved element locus uce-726"
BASE COUNT          209 a          115 c          149 g          214 t
ORIGIN      
        1 attatcaagg tctttttttc tgtgtttggg ttagtgtttc aaacagcagc caagggacaa
       61 tgtggacctt gcttcagagt ttagacatta ctgaattgaa tcactatggt atagtgaaga
      121 cctgcacttc accacagaaa tacagtatgc taatgaagca gcgctccaaa tatcagacat
      181 ccatccggta tcttggcatc aaaatccagg ctgccaaagt gaaacaatct tctccgatta
      241 ctgtcctact ccacttattt tacttgatgt ttttgttacc aactttatga gaaatgtttt
      301 agggtttttg tctgcagcat tgtgctgtag gtatcttaaa ttagctcaaa ctttaggtag
      361 ggattgagga atgagtaaaa agtctgcata atatttttga atataaattg aggcaatgat
      421 tgcacaggag aaaatgctat gtggggatta ttcacagtta tataatgtta ggaagaaaac
      481 caggcgcttc tcattttggt cacttatccc tcattgtaaa ggtctgtata tttcattgct
      541 ggtgcagcag cttaggggat acatttcaaa gcagcaaata aaaattggct aaacttccaa
      601 aattagcact tcaaagtcaa acatgatttg cagcgaggga aggggtggaa gcagtgtgac
      661 tgtgaaagtg cgtttgtaaa agcagtg
//
LOCUS       KCHQ01000090             371 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 10128cha ultra-conserved
            element locus uce-727, sequence.
ACCESSION   KCHQ01000090
VERSION     KCHQ01000090.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 371)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 371)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10128cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>371
                     /note="ultra-conserved element locus uce-727"
BASE COUNT          101 a           66 c           75 g          129 t
ORIGIN      
        1 agctacagca ccttttccca tggggcaaca gtgtcaatac ctcgaacatg gtacatggcc
       61 gtgccaaaga aaaaaagaaa aataaaaaaa caatatattg gtcaggatat ttatcttttt
      121 ttccctaaaa ttggcatttg acatgatgat attctattgc cgtctggggg agggaaagga
      181 caaaggttct tcttttgagt ttatattcaa gttttctcct tttttctggt gtataatttc
      241 ttcttttcct gtttaaaaag agttcacact tttgtgattt gcgtgtgctg ctcttcatca
      301 aaaggttcat tttccggatc agagtcagtg gtgtcagagt atcgataatg gtctggctca
      361 ttgtcgctaa c
//
LOCUS       KCHQ01000091             471 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 10212cha ultra-conserved
            element locus uce-294, sequence.
ACCESSION   KCHQ01000091
VERSION     KCHQ01000091.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 471)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 471)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10212cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>471
                     /note="ultra-conserved element locus uce-294"
BASE COUNT          150 a          103 c           75 g          143 t
ORIGIN      
        1 gtaactacaa cagcagcctc gtaccagagg ggaaaactta actcctcaga cctatgcatt
       61 aaacatattg tagaatagag tgtaacattt atcactgtca ttcctagaga gtttgtgtaa
      121 atttaaatgc gctcaagcgt gctgattccc cccccctcca caatgtatgc gtacaatgcc
      181 accccaaagc ccattttcct gaaatccttc tcattgttct gcacgaccat accaccaaac
      241 agctattcat ctttggggaa tatgctgtac agaaatgtct ttgtatgtgg ggcctttttc
      301 tgttgccgtg tttcatacag cagaatctat ccacctattt ttcatggtta aataaatgaa
      361 aaaaacctta aatgaaagaa aatatatcca acaagattgc atatttattt cactgtaaag
      421 cacatttgta ggttgatttc agcatgatat gtataaatga tcacctaaaa a
//
LOCUS       KCHQ01000092             227 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 10296cha ultra-conserved
            element locus uce-295, sequence.
ACCESSION   KCHQ01000092
VERSION     KCHQ01000092.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 227)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 227)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10296cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>227
                     /note="ultra-conserved element locus uce-295"
BASE COUNT           46 a           75 c           56 g           50 t
ORIGIN      
        1 gctcaacatc gccagcctga gcgtggaacg ctttatggcc atctgtcacc cgttcaaagc
       61 caagagcatc atgtcccgca gccgcaccaa gaagctcatc agcgccatgt ggctcgcctc
      121 cttcgctctt gccacaccga tgctcttcat catgggccag gtggtgcgta acggcgagaa
      181 gatatgcacc gctgttgtct cccatgtcac ggtcaagatt gtgctcc
//
LOCUS       KCHQ01000093             530 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 10375cha ultra-conserved
            element locus uce-790, sequence.
ACCESSION   KCHQ01000093
VERSION     KCHQ01000093.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 530)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 530)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10375cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>530
                     /note="ultra-conserved element locus uce-790"
BASE COUNT          167 a           79 c          126 g          158 t
ORIGIN      
        1 cacaccgatt tcaaaaagtc tcacttcctt tttgacagat gtggtgtcag ctttgctgtt
       61 taattaaaag gaaatggagg tgatgattgc aacacagacg tgatctgata tgataatgta
      121 tttacaatca tcaagatgat cgtcattaag gatgtgtcaa ggacgaattc attgtgggat
      181 ttggggtcct gagctgtcaa gtgtattttt ctgaggcagt tgtgagactg tcaggaggat
      241 gctgtgacta tgacagtcac aattaataat ttgctaaaag aatgtgattg agttttatac
      301 acagttttgt catggcgatt tccaaagccc ggagtattca taccagccgt gtgagcaaga
      361 gagagagaga gagaaaaaaa ggcccaggca tgactgaagc aagagacaaa aatacccttg
      421 atacataagc tgtatggggt tctattatta aatgactttg agttatttca tgcatgctag
      481 cttgaatttt tcataagagg tgcatatgga aggttcatca aaacaaattg
//
LOCUS       KCHQ01000094             483 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 10468cha ultra-conserved
            element locus uce-297, sequence.
ACCESSION   KCHQ01000094
VERSION     KCHQ01000094.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 483)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10468cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>483
                     /note="ultra-conserved element locus uce-297"
BASE COUNT          126 a          109 c          122 g          126 t
ORIGIN      
        1 tgcgatcttg tgaggtcgaa cgaacgactc ttattactgc cgctttacag tgaggagaag
       61 aaaaaaaaaa acacttgact tgtactaata gctgagaagc catgctggtc accaaaggtc
      121 tgaagacgaa gcaccctgtc agtgcccagc ttgggaaatt agcaaataat gttcccttcc
      181 ccctgacaaa tgtgtgacag ctcgccttcg ccaatcattc tctcctaacg ttatgatgca
      241 tgtcctggat ccccactgga ggatacaggc gaagtttact gaccctcaat ttacccatga
      301 caaatggggt cccggtaaat gtgcgttttc tggggcgcgg aaggggttca ttttaagcaa
      361 tcctggttat gtggatgtca ctgattagga taaatagtgg ctgagtgtgt taggactgct
      421 tgcagaacca tattaccaag ggcctgcatc gttgcccctg gaggggagct cttgtggaaa
      481 ctt
//
LOCUS       KCHQ01000095             533 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 10566cha ultra-conserved
            element locus uce-290, sequence.
ACCESSION   KCHQ01000095
VERSION     KCHQ01000095.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10566cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>533
                     /note="ultra-conserved element locus uce-290"
BASE COUNT          179 a          110 c          106 g          138 t
ORIGIN      
        1 gatgccagca gtgaaccatt taaaacgccg ccgcgtctct ccccctgcaa atcgagggta
       61 ctctgcatgt aactgctctg gagttggaga tggtacagat ggctggccta aacgcaacac
      121 ttatccagac atttcactgt tcgcagaatg atatcaaagt caactcaaaa tggaggctgt
      181 gccatcaact tgaaacaaat tctaacactt ccaacaaaat tgtattgtga gtaaagtcgc
      241 cgcggatttg gtcagcgttc agcacagatg tcccccctgt gtgtgtttgc gttaaataaa
      301 aactagtgct cacatcctct taaaaattca gctgtggatt ttcagggata aatgctcaca
      361 attataatgt tttaatccag attggattca gacacattta tttatttcag agcgtgagag
      421 tttaaatcgt gcatttaaaa aaaaaaaaag gaaatacaca gtgccagaac aaaaacaaac
      481 gccctaaatt atgagaaata tggaagaatg actgaaacag caacatcgag ttg
//
LOCUS       KCHQ01000096             327 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 10658cha ultra-conserved
            element locus uce-291, sequence.
ACCESSION   KCHQ01000096
VERSION     KCHQ01000096.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 327)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 327)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10658cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>327
                     /note="ultra-conserved element locus uce-291"
BASE COUNT           98 a           70 c           68 g           91 t
ORIGIN      
        1 atggatgggc cccctatcta tcacaaaaat cagaatgtgt cccatactga gcctattgta
       61 gtctattaaa agaaatcctt ccctgtggca accattttgc aggtttcaag tagataaatg
      121 ccttccaaga gggataagaa tgcatttcta caaaactgca ttaaagagta atgtttgtca
      181 actacgccga taaaaacttc acagtcacaa ttctttttag aggcagcaaa tgcattggca
      241 atgtgtaaag ctgattggtc tggggaggct gcctacaggt tagcaggcct catttccaat
      301 ctctgacagc aatatgtgtc gccgtgc
//
LOCUS       KCHQ01000097             447 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 10753cha ultra-conserved
            element locus uce-292, sequence.
ACCESSION   KCHQ01000097
VERSION     KCHQ01000097.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10753cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-292"
BASE COUNT           96 a          128 c           96 g          127 t
ORIGIN      
        1 cccttttgga tcccgtccca tcctcacagg aagtgtaaca ttaaagcgat gccatgtctt
       61 ccttctctct tccctttgcc cctctctgcc tgcattcctc tgactgactg cggcacgttt
      121 cgggacagct tcattcagca ttcctttaca tgccgactgg tttgccctcc cctctcattt
      181 tcttcaagtc tccctctgtt taggtccgac tttatcacgc gggagccaaa caccaagaca
      241 acttcatctc atccaatttt caccccctta attcggttta aatggcatgg ccgcgagggc
      301 cagaacggga attaataaga gccaataaag ctcgccactg gggcatcgag gccagtcttt
      361 aagtaaacat tatgacttct tgagggggga ttcaggggca gcacttgatg aattgtggcg
      421 gagcttggga agggctaatt tctcact
//
LOCUS       KCHQ01000098             374 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 10845cha ultra-conserved
            element locus uce-183, sequence.
ACCESSION   KCHQ01000098
VERSION     KCHQ01000098.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 374)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="10845cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>374
                     /note="ultra-conserved element locus uce-183"
BASE COUNT          110 a          102 c           75 g           87 t
ORIGIN      
        1 cacggtactc ccccagccca ccccataacc ccacactccc tcttagagct gcaaggcaca
       61 gggctgtgct ttatttcttt gctcattttt ctcagagatt ggtaccttca cacgcagatc
      121 cataccatgc tcctgtgcag cgcgggcggc ggtgaagaaa gagggttata ttttcccctt
      181 gagttaggac acctcatgac aaatgataat ggataatcaa taaagcggga aatatgaggc
      241 agcaaacttt atgaagccag gagacgtatt actccccaac aacactggtt tcccttaaca
      301 aagtcactac tcgactgtgc ctaataatct gaaggaaaat caaaggaccc gcaaccacat
      361 cagcaatatt ggca
//
LOCUS       KCHQ01000099             360 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 11026cha ultra-conserved
            element locus uce-299, sequence.
ACCESSION   KCHQ01000099
VERSION     KCHQ01000099.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 360)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11026cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>360
                     /note="ultra-conserved element locus uce-299"
BASE COUNT           74 a           96 c           88 g          102 t
ORIGIN      
        1 tattttcact tcgttttcac ctcctcacat ttcttcattt cacatgggct ggaagtgcct
       61 gcagccttct ctttcccttc tccagagcaa agtgaatgtg acttttctaa gggggtcaca
      121 ggatgcctgg aggcctgtgg gtgttactgg actgttgcct gctctcagct tcactgaggg
      181 gcttgtcata gatttcatct ccacagaaat gagccggggg gccctggcca ggagcacaag
      241 cagccaacgt tatgaagggc ctgtgctgat tatttccctc tgacatcgca tcctgagctt
      301 tccgcattaa tcccagacaa aggcagccct tcagtgctgt gccagagttc aaattaggag
//
LOCUS       KCHQ01000100             534 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 11124cha ultra-conserved
            element locus uce-693, sequence.
ACCESSION   KCHQ01000100
VERSION     KCHQ01000100.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 534)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11124cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>534
                     /note="ultra-conserved element locus uce-693"
BASE COUNT          103 a          154 c           87 g          190 t
ORIGIN      
        1 taaactaaca gattgtaaac atgctgctag ctctctctct ttctctgctc tctatattaa
       61 ttactctcct tctctccatc tccttctctt tcatcttctc tcacctcttt cacttcccct
      121 cctagccctg tttgtttcat ccttcccccc catctgcatc ccttcttccc ttctcctctt
      181 tttctctccc tctccctctc tctcccactc tcgcttttcc tagggtattt tttaaacaat
      241 gtgtccttca tgtacggttg gttacagggt gtacagaagg acatcattag cgctggtggt
      301 taagctgtaa tttacaccat taccgaggta ggggccattt ttattgccta gtaaatttca
      361 gctctgaaat atttagacca tatggctcaa tttgtgtaat aaccttaatt tccaagcacc
      421 cttcagctcc cttcagcgcc ggctgttgtt ggcggatggc ggagtggtgt gtatacacgt
      481 ttgtatgtgt gtgcacggtt tggggtttag agcacacaca cacacacaca caca
//
LOCUS       KCHQ01000101             693 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 11196cha ultra-conserved
            element locus uce-519, sequence.
ACCESSION   KCHQ01000101
VERSION     KCHQ01000101.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11196cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-519"
BASE COUNT          206 a          144 c          135 g          208 t
ORIGIN      
        1 tatttgtatc tagatgatat catcttaaga gaagctactg atgtttcttc tctcttgcca
       61 tatttgtcat ttcccttcaa ttttgatgta cagcccaagt taaggttaaa ttcatgcctg
      121 cagaaatcaa actgctaagc catgtttgtc aggaaaatgc atgaagagca aaccaagaga
      181 gggaaaaaac acaatggtgg gagtgatgat caaagttgcc ttaaaaatct atagaaatca
      241 aagaaatgca caaaaactac agcattttcc tctgatctgg gttgattcag attgatgaca
      301 ttgttagttt tgactttcaa aacctccagt accttatttc tttgctcgcc tagtcctaat
      361 gcggcatcgt ccacaaagat gggatcccac atcgagtcat atgcgtcaat ttccctctgt
      421 ttcattctgg catacagagc atcatctctc tgaactacat ttcccaccag ccactgcaag
      481 catacaaaat cagcactgtt acttagggga aatcgtagct tgccacactc agaaggaaag
      541 ggtgttttat tttatgtttt tctgttgctg ttgttcctgc taacgttagc agctgaatga
      601 aatttaaagg gaaggctttg gcaccacagc cagtgatctt tccaaggcgc cttgcccttt
      661 gagagacaca gaaatatgga gataaagtgt aag
//
LOCUS       KCHQ01000102             212 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 11327cha ultra-conserved
            element locus uce-654, sequence.
ACCESSION   KCHQ01000102
VERSION     KCHQ01000102.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 212)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 212)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11327cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>212
                     /note="ultra-conserved element locus uce-654"
BASE COUNT           51 a           66 c           59 g           36 t
ORIGIN      
        1 cctcgcagtc catgggctca gagcgggtgg agatgcgtaa gagacagatg caggttcacc
       61 aggaagcagc tgccagtgtc ctccaagcgc gccacagaat gggaaacacc cccaccaacg
      121 cctcaaacgc ctgctgcttc tgctggtgct gctgctgtag ctgctcctgg taataacact
      181 tcccacacag cagggctgga cacaggagac at
//
LOCUS       KCHQ01000103             353 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 11509cha ultra-conserved
            element locus uce-656, sequence.
ACCESSION   KCHQ01000103
VERSION     KCHQ01000103.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 353)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 353)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11509cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>353
                     /note="ultra-conserved element locus uce-656"
BASE COUNT          115 a           93 c           61 g           84 t
ORIGIN      
        1 catcacaccg gcacagaacg tgtcttcaag agtcatggac tcaacactca tacaatgtgc
       61 ttttgagtac atacatatca ttttattgct gcatatatca cccccacact gagacatctg
      121 aaaagagagc atgatctata ccaaaacatt aatcatcatt cattgtatgt taataaattc
      181 agaatttctc catttaccat gcggacgtcc acgcgtgctg gaaatgcaac ctttccagag
      241 ctcataaatc acacacactg agtcatctga caaagtaccc caaacacagg ctgaggcgct
      301 gcgatcccta gggcacaaac acacaccatc taatgtggcg gaatcagagc gag
//
LOCUS       KCHQ01000104             547 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 11695cha ultra-conserved
            element locus uce-650, sequence.
ACCESSION   KCHQ01000104
VERSION     KCHQ01000104.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11695cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-650"
BASE COUNT          149 a          164 c          117 g          117 t
ORIGIN      
        1 agctccttcg actgccccgg cgacgctgct tcaaacagcc ccactacaac tcccctgcca
       61 ctccggcccc tcctcttcac tacagggtca caacccacat tgccacccaa tccggagggg
      121 atcaaagcac atctcaggga cctgaattaa catggaatac cacaggcaca gccctataaa
      181 tatcagcccc ttcaaaagaa gaggaacaga gggagtggag gagcgatata aaacaggcct
      241 cagccaagtc atcccaagtg tttatcttgg acacatttct atctcagcgg ccaataaaac
      301 aattccactt aactgtaagt ggcccctaaa gagaatctat tcctggtcct aaaagggctg
      361 tgcgattgct tccatatggt gggacagcat ggggacaagc acgatgagct cagacccagg
      421 tccatttggc tggtacctca gcactgtcca tccacagctg tgatattaca tcctaacatc
      481 tgggttattg cccgctatgc ctgggaatta tcagcgttgc cgatcttagg catcccacac
      541 tggcaac
//
LOCUS       KCHQ01000105             379 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 11792cha ultra-conserved
            element locus uce-651, sequence.
ACCESSION   KCHQ01000105
VERSION     KCHQ01000105.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 379)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 379)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11792cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>379
                     /note="ultra-conserved element locus uce-651"
BASE COUNT          111 a           78 c          113 g           77 t
ORIGIN      
        1 cccacacaca cacactgctc ttgactggca gggaacagag agagagtgga gagaggagga
       61 gatctagagg atgggaaagg ggtggtggtt agggatgaaa acacggggaa gagagggagg
      121 gaaagagagg gaggggcggg ataagggaat tcccttagca gttgttattg attccggtgt
      181 ttacgggcga atagtttagt gccgtttaca aaacagaaca gatgcagcca gtgagcaaaa
      241 aggtaaacaa ttgctgtgtg gcgggctgcc aaatccccag tctgatgtat taaactcacg
      301 gtgaagagca tttccccttt ggctgcactt attgccactt catttcctct tcgctcgcac
      361 acacacacac acacacaca
//
LOCUS       KCHQ01000106            1055 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 11887cha ultra-conserved
            element locus uce-653, sequence.
ACCESSION   KCHQ01000106
VERSION     KCHQ01000106.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11887cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>1055
                     /note="ultra-conserved element locus uce-653"
BASE COUNT          324 a          200 c          222 g          309 t
ORIGIN      
        1 actgcagttc atcacatgat gataggttta ttggtcggtg gactacaagt ggatttataa
       61 ccgagaggtc aaaggtcaaa tgaaacatca gagagtcgtc tatctgtccc acctgttaga
      121 catcaaagaa aaaccagcca cgctgttcac agcaactggc atttaaaaca attaagtttc
      181 ctgtcaagtc cctgtgatga attatccgga agctttaccc gctgtaattc taaatcttcc
      241 caacaagtgc ctttgttgta gagaaattaa tgaaaacaag attgtctttc ataggagctg
      301 atctaacagc gcgacagcca gctgctcttc tttgggaata aaaacagtca gcattaaaca
      361 cagctcacac aaaatacttt ttttttctac cactcgtgtg gaaaacaaat caggcggcga
      421 gcgcagtggc catctgtttt gttatttgat atgtgtgaat acatgttgta atgactttgt
      481 ttgtgaatca ctctccgcgg cagaacacac gagagctctc gaagtgctgg agtgttcaaa
      541 gctaatcata taattggaca caatagtcga tgacaaatgg agacgcttgg agccagccag
      601 ctggggaagt gaatatgtaa tcattgtaaa atcatatcat ttttgcatat ttgaagacag
      661 cttaatagag tttgcgtgtc agcacacgat caaatgatga tcggagacag tgaggctgta
      721 tttgcttttc caaatagtgc tttgttagac tattcatctt catcacaatt aaaagtcttt
      781 ccctagtttg tgtcttacat attcatttgt gttccgtgct attttgaaac agatttggga
      841 caaatgaccc ttctgaatat gaaggaagaa atacggtaga gcagttaaca gcctacagca
      901 gtgattccaa aggggtactt gtacccctga gtactattgc agttgccagg aggtatgtgt
      961 aaagactgtg gaatagctta ttacaattca tatatatatc agctagaaaa ccggcagtgt
     1021 ttggcattga cagtgatcaa aaagtctaaa ccatt
//
LOCUS       KCHQ01000107             271 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 11988cha ultra-conserved
            element locus uce-153, sequence.
ACCESSION   KCHQ01000107
VERSION     KCHQ01000107.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 271)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 271)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="11988cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>271
                     /note="ultra-conserved element locus uce-153"
BASE COUNT           66 a           74 c           78 g           53 t
ORIGIN      
        1 gggcacgtcg ctggacgagt aagccgtgct gggtgccagg gacgcggggt gcgccatcag
       61 attcctgcac tggttcgcag caaagttgcc accagcaaaa ccctccatgt tcttgctcac
      121 ttcatcggaa cctccgccgt tgtcgtagag gaacatcacc gacgggtcga cccagcgagg
      181 acggaggagc agtgacgttg tcatagcacg gcatccaaca ttgaagcttc tggctctttt
      241 ttaaaaagcc cagagactga aaaaaggaga t
//
LOCUS       KCHQ01000108             378 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 12084cha ultra-conserved
            element locus uce-152, sequence.
ACCESSION   KCHQ01000108
VERSION     KCHQ01000108.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 378)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12084cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>378
                     /note="ultra-conserved element locus uce-152"
BASE COUNT          122 a           77 c           83 g           96 t
ORIGIN      
        1 tctaatatta gaggttgtgt ggacgtatag caacatgttt ccattaaatg tgacgttcta
       61 agaataggcc acagcacata aagcgaaaat ttacaagggt gtcagtcaac aatttaataa
      121 attgaaaatc catttatctg aatacagagt tctgcccttc actccactgc ctttccctaa
      181 cagatggtgt tgtgggtgct tatgtccaat ttgatttgaa ccaaaccctc agccaatttt
      241 tacactggca tgaaatctca gcgagccaga tccacacact ggcagtcaga aatagcagcg
      301 gagagggcgc gacattgtga aagaacgatg aagggcaaaa tctggagcga cattcgagaa
      361 agtcgcagga aaagtttc
//
LOCUS       KCHQ01000109             526 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 12180cha ultra-conserved
            element locus uce-151, sequence.
ACCESSION   KCHQ01000109
VERSION     KCHQ01000109.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12180cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-151"
BASE COUNT          118 a          144 c          113 g          151 t
ORIGIN      
        1 aattggaaat tattacacat taaaccctct gcgcgcgggc caggatcgaa ctggatcaat
       61 atcttgcccg gcacaataaa tcagatgctt tctctccccg tctctctttt cccctttgct
      121 ttttcaagtg gctataggcc actgctcggc tggaacatat ttaaattttc ttgtaacaaa
      181 ttaattccaa cattttctct tgattgaatt aggccaagtg ctggtgctgt cacaagtgtt
      241 tgggctgctc ctggggagag acaaattgcc aggcctggac acgggtaaca agcagtggtg
      301 ttgagtcgct gataatctcc ccactaattc tccattacag caaaatgagg ccataaatct
      361 tcctgacagc tgatcgatgt aaacattgtt tcccccatga ttgccagctc tcccagcgga
      421 gctactgtcc gctcacaatc cgctgaaatt actccggcac cagccctccc tcccttcttc
      481 tcctccctgg aactggtgtg tgtgcgtgtt ggactggcct ggcggg
//
LOCUS       KCHQ01000110             583 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 12275cha ultra-conserved
            element locus uce-150, sequence.
ACCESSION   KCHQ01000110
VERSION     KCHQ01000110.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12275cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-150"
BASE COUNT          162 a          114 c          191 g          116 t
ORIGIN      
        1 attggccaaa aaatgaaagc cagtcccatg ccttcatttg tataggggaa taaaggggtg
       61 cttgagagag cctgcaggga ggcttgaatc acatgacaaa ggccctgtgg ggatgggctg
      121 tcaggcctgt cagctcccca ctccaaatga acatctcgca aaggcaggca ggacccacag
      181 cagctccacc ctgccagcct gtgacaggga aacctctagg caacttgaca ggaggagaat
      241 gtggcagcta gcaaggagaa aagctctggc atgactgaga acggtgacga tggaaattaa
      301 tgggaaaaaa ggggagaaca aaaactaagg agtgggggct ggtggcgtgg gtcctttcag
      361 aatatgtaat gacaatgtat gccattggtg agcctttggc acggtgttta ttgttgggca
      421 aacagtggag agacaggggg cgtgtgggga ttgcatcatc atggtgccat cttgtcaggg
      481 aaagtaaggt ctcaactagc agggagtagg gcactgggct tggagggtaa tctgccacca
      541 ggcatcggaa gagcgtcgtg tagggaaaga gtgtagatct cgt
//
LOCUS       KCHQ01000111             239 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 12368cha ultra-conserved
            element locus uce-157, sequence.
ACCESSION   KCHQ01000111
VERSION     KCHQ01000111.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 239)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 239)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12368cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>239
                     /note="ultra-conserved element locus uce-157"
BASE COUNT           55 a           60 c           61 g           63 t
ORIGIN      
        1 gccaagctgc cccatctgct tagcgcagca gtccctgtcg tataactgtc tacaggccgt
       61 gggccacata aagaatgtct cagatttgat gtaattccgc aaaattaatg acagctttac
      121 tcggtatggg ccgtgaggga atgattagtg tttgatcgtc catctgatca gttcccttgg
      181 ctggctgcag gagagatgct ccactatatg ccggcgtgct gcctatggca agcacatac
//
LOCUS       KCHQ01000112             240 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 12461cha ultra-conserved
            element locus uce-1155, sequence.
ACCESSION   KCHQ01000112
VERSION     KCHQ01000112.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 240)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 240)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12461cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>240
                     /note="ultra-conserved element locus uce-1155"
BASE COUNT           72 a           39 c           62 g           67 t
ORIGIN      
        1 aaattataat taatctgtta atgacagtcg gggctgtcat aagctcgggg agtgtataat
       61 aaattgctgt aataaaaatt aagattgcat gcatcattga ggccttcaga gggtttgttt
      121 aatgtagtta caaaaatggt agcagctgat gtggcgtcca ctgctctacc aggagaacgc
      181 taatttctga gtgacactta acctgctgta gctcaaccac aactgaggga ggtgaggggg
//
LOCUS       KCHQ01000113             431 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 12622cha ultra-conserved
            element locus uce-154, sequence.
ACCESSION   KCHQ01000113
VERSION     KCHQ01000113.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 431)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12622cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>431
                     /note="ultra-conserved element locus uce-154"
BASE COUNT          121 a           88 c           88 g          134 t
ORIGIN      
        1 agccccttcc tctcctcaac cttcgtcttt cattcaacgt cgagtccttt caaaacaagg
       61 tgaagttcag caaagtttct ctgcagagat gatcaaacag tcacatcact aatggcgatg
      121 ggtgacaggg ccagtgaata cagatcagct ttaattgtgg tgggtcttac tgccactgtc
      181 tgtcaatctg agcctttgaa ttggtgaaaa tttgctctgt tcattctgtt aaatgacgta
      241 tccaattaaa cgctttagaa ttcatgatct tcagtcaagg ttaaatgaaa gcagttagtc
      301 ctgtcaggga ggtgattaaa agctgactac attgggcaca ttttgtgcaa aaatttaaat
      361 ttggaactaa agcatgaatc tttattcatt atgtgcagtc ctgctacata aatgtccggc
      421 acagtcgctg t
//
LOCUS       KCHQ01000114             365 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 12670cha ultra-conserved
            element locus uce-633, sequence.
ACCESSION   KCHQ01000114
VERSION     KCHQ01000114.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 365)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12670cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>365
                     /note="ultra-conserved element locus uce-633"
BASE COUNT          115 a           62 c           73 g          115 t
ORIGIN      
        1 ctgagtcagt ttctgttgtc ctgattactc acgctacagc ctcacgtagt actttaataa
       61 atgaagaaat aataaaatca atcattttaa atagcgccgg accatttaca gcagagggag
      121 gaaaaaagag cagactttta attgatgaac ttgacctgct tttccctgat aacaaatttc
      181 atttgttcta taaaaattat gctcaagtga cattatttga cgggatcttt atcacctgca
      241 gagtaaataa gagtaattta tgctgtttaa ttctgagcat gcattataaa tcatagctct
      301 atcatacatt acggagcctg cattgatgag ggaagtgagt gcggggccag ctgattgggt
      361 tgtta
//
LOCUS       KCHQ01000115             455 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 12782cha ultra-conserved
            element locus uce-683, sequence.
ACCESSION   KCHQ01000115
VERSION     KCHQ01000115.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12782cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-683"
BASE COUNT           97 a          137 c          132 g           89 t
ORIGIN      
        1 gagtcgtaca ggtcgacatc cttggtctct gtcgtgacca ctgaggatgg gcccccacct
       61 ccctggttct tatcagcccc ctgtcccagc tgtgccgcct ctccctccac ctccagcagc
      121 tcctctatca cctgctcaaa cgtgtctgtg agtgagggca gttccccgcg ctggcctggc
      181 ccaccaccac tctgtggagt cccgtggcct ctggcggccg tcgcagcggc gcccaagtag
      241 ccttccgtcc gatggccccg catgcccggg gcgtctctca ggggcgcagc tctcatgcaa
      301 ctgaagtatg aaataaccat agtaaggaac aggatggtca tcactcttct aacctggtgg
      361 aactggaggg ggagacaaag acagaaaaca agaggggagg aggggggaga gagggaacaa
      421 gacgggttag tcaaagagca ttttcaatga agtta
//
LOCUS       KCHQ01000116             506 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 12852cha ultra-conserved
            element locus uce-713, sequence.
ACCESSION   KCHQ01000116
VERSION     KCHQ01000116.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12852cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>506
                     /note="ultra-conserved element locus uce-713"
BASE COUNT           96 a          145 c          118 g          147 t
ORIGIN      
        1 tttctctata tataaaacca tcatttccat ctgctcctcc gtctcctgtt ggcacgccgg
       61 cccactggcc tgctcctcaa accactaatc aggtaatgtc ggggaggctg aatggcgtgc
      121 ctccccctgg tcagccttca ctgctcacac agtggtgttg ttttaaagag cattctttag
      181 cagctgaact tggaaaggta ttaaagtggg attaggctcc tccacaatcc actgcttgtg
      241 tcattcaggg agtttgtgtt ctcctctccc cactgccacc tccccactcc tcctctgttt
      301 gattgtggct agccgcagga gtgggactga ctgtgccttt caaaggagag gggtagggtt
      361 aaatccctag tccactgctc cctgctaatt ctccttgttc cttagagaag gatttacttc
      421 tgctgccagc ttctcaaagg ccttctctgc ccatccgaaa agtcgccgtt gccttcctgt
      481 ggaggtgtgg ttgccataga aggggc
//
LOCUS       KCHQ01000117             383 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 12939cha ultra-conserved
            element locus uce-682, sequence.
ACCESSION   KCHQ01000117
VERSION     KCHQ01000117.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 383)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12939cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>383
                     /note="ultra-conserved element locus uce-682"
BASE COUNT           85 a          102 c           85 g          111 t
ORIGIN      
        1 aatcgtctcc ttttaggacc aagcggccct ctcgacctcc atgctggctc tggcaaggta
       61 ccaagtagca caagtgccga ctagccaatg gggttcaggg ggaggtccct gagctctgac
      121 cagtcaaaca cactctcctt ccttatatgg cagctgatct ccatggtaac gtgtgctaag
      181 ttgcagcagt cgtgtcaaag ttcactatat agagagctca gtgagctgat cagagagaaa
      241 gcattctgcc agcccggctc ctaccaatcg caaatcactt cctaacctcc gcctttttaa
      301 catatttgat cactttgatt ctctactcct ttttcctatt atttttcggt ccacggagga
      361 ggtttgtggg ttgtgatctt tgt
//
LOCUS       KCHQ01000118             382 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 12985cha ultra-conserved
            element locus uce-1150, sequence.
ACCESSION   KCHQ01000118
VERSION     KCHQ01000118.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 382)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="12985cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>382
                     /note="ultra-conserved element locus uce-1150"
BASE COUNT          124 a           80 c           71 g          107 t
ORIGIN      
        1 tggcctcctc catcaatcgg actaatcaag catcaagggg aggcaggacc agcttaattg
       61 ccagccagat atagctgctc tcacttgacg tgcaacctga aatagaaaca ggtctgagga
      121 gacatgacgg aagataaatg aatacagcca ttgttctaat aattatatca aaatacactt
      181 ttactcttac tcttaatcca cactccacgc aaacaacggc taatgcaata gatcctgtta
      241 tttcaacacg gcaaatcaac actattgcaa atattgcctt aatatagcgt catccactca
      301 ttaaaatgtg gattatgttc acatttgtaa tgtttggtac ctcaggttag agaagtgtac
      361 agtaagttgt tagggagttt tg
//
LOCUS       KCHQ01000119             574 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 13060cha ultra-conserved
            element locus uce-1183, sequence.
ACCESSION   KCHQ01000119
VERSION     KCHQ01000119.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 574)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13060cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>574
                     /note="ultra-conserved element locus uce-1183"
BASE COUNT          170 a          116 c          116 g          172 t
ORIGIN      
        1 attttattgt ctgtaaatgt cttttccact ttcctttaaa caaaagctgg atggaagcag
       61 ttaatgagcc aaaagcctgt ttgaataaga agctgctgta acaatctctg tcccaattag
      121 cacgctttgg tttttaaata ttccttttgt gcgaagccta aacacacatg aagactcaca
      181 aaacggtcac gttgaaaatt taataggctt ccacagcgat ttccttcatt tatttaaaat
      241 gttttttgtt tttttttccc tctcttttta aaaagctaga aatctgagag gcatggcaag
      301 gcattctgct gtgaggggag cagcattcac aaatactaga cctaattcct ttggcagcag
      361 ctcaaactgc tacagacaga cacataatca gctggggagt gttagcgcct cagcccacta
      421 gcaaacacag gaccgagccc ttgttgtgca tcgctgcttt tcagaataaa tatcccgatg
      481 gaaaatacag tgggaggaaa gaggtattca tgtgtatata gctcttcttt gttcagtcaa
      541 agatacagaa ggagagagga acactggctt tctg
//
LOCUS       KCHQ01000120             351 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 13151cha ultra-conserved
            element locus uce-696, sequence.
ACCESSION   KCHQ01000120
VERSION     KCHQ01000120.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 351)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13151cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>351
                     /note="ultra-conserved element locus uce-696"
BASE COUNT          101 a           77 c           88 g           85 t
ORIGIN      
        1 cctgcctctt tgccttcctc agatcaatgc cctggccact cactttctga tgttgcacga
       61 cgggaaatgc tttgaatact tgcgacatgg ctgcgcgcat tgattgccaa gattgacagc
      121 agctctacca tcgtcttctc ttgtctgagt gagagagagg gacagagaga aagagagaga
      181 tagagagaga gggagataaa gaacagatag gcgaacaaca aaaggtactt gtagttttgg
      241 acagctgaac ttcactgaga gtatacggga tcccctcata tggccccgtg tgagcagacc
      301 taagttttcg ctcaacagat agctcagaga tcattttata caaagtatag c
//
LOCUS       KCHQ01000121             282 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 13697cha ultra-conserved
            element locus uce-471, sequence.
ACCESSION   KCHQ01000121
VERSION     KCHQ01000121.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 282)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13697cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>282
                     /note="ultra-conserved element locus uce-471"
BASE COUNT           82 a           78 c           57 g           65 t
ORIGIN      
        1 gctagcatga gctgagccac aagtaaatct aaagtgatta ttcctgccct tagagaaagg
       61 ctgtctccct gctctctgtc aaaaggtcaa ttatggcccc aaaccggcat gcagtgacag
      121 tgacctggaa gcgctactga tgaccccaca tccaggggcc caaaagagtt gatcatctaa
      181 catgcaggct gcccggagcc atggaaatct gacatttgtc cttattcaaa tgaacacaaa
      241 caatatgcat ctcatgcctc tccctaacct gtgccaaatc ta
//
LOCUS       KCHQ01000122             617 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 13942cha ultra-conserved
            element locus uce-474, sequence.
ACCESSION   KCHQ01000122
VERSION     KCHQ01000122.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="13942cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>617
                     /note="ultra-conserved element locus uce-474"
BASE COUNT          209 a          127 c          175 g          106 t
ORIGIN      
        1 tttttttttt ttcagggggg agaggctggg agataaaacc tacagagacc aaggggaaaa
       61 aaaaaaaaaa gatttgggac agaaataagg aatgagagag gggaaagtaa agaaacaaca
      121 gagcagagaa tatttgtaaa gagcaagaga atagtcagag aagaagaggg ataaggaaga
      181 aaaaagggag gagaacgaga gaagggagca agggatgaga cggctgcctg gaaagacgat
      241 tagtattcat gcggcgtggc gctccagaga ggattaatgg actctgatgc ctaatatcct
      301 ggagaacaat taatttgccc acagttttgt catggttgaa agtcaaatgc tggaacagat
      361 cgatgcgcac agccgccagt gaaatcgcgg cagccccttc tgccgggcgc agaattttaa
      421 tttcatcatc atcattttcc ccggctgcca ccctcgacga agctgtccct gacatggctg
      481 agagggccgc cgcatcccaa caggcatggc gcacagaaaa ggcacagtga atacgcaagc
      541 atgcagcaca ggctcgcaca cacacactca gcggagagga actcagatgt gtgcacgcac
      601 gcaaacacgc acatacg
//
LOCUS       KCHQ01000123             267 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 14228cha ultra-conserved
            element locus uce-479, sequence.
ACCESSION   KCHQ01000123
VERSION     KCHQ01000123.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 267)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 267)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14228cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>267
                     /note="ultra-conserved element locus uce-479"
BASE COUNT           51 a           75 c           61 g           80 t
ORIGIN      
        1 ccttgatgct tatacacttc caaacgccga gagttttagt gctgattcct attgagcctg
       61 ttacagccct gtaatgaatc ctgtcgctcg tcttgcctgg ctcagattcc tcctccacat
      121 accagggaga tgccaggggc cacacagacg ccagaggagc cttcctaaat cacagccttg
      181 ttacactgat gaatgtgtgt gtcctgttct gtgatctagg ctatctgcct ctgcgtagtt
      241 gtgtgtgcac ctctgcttct ctgcatg
//
LOCUS       KCHQ01000124             280 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 14271cha ultra-conserved
            element locus uce-889, sequence.
ACCESSION   KCHQ01000124
VERSION     KCHQ01000124.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 280)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 280)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14271cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>280
                     /note="ultra-conserved element locus uce-889"
BASE COUNT           66 a           61 c           64 g           89 t
ORIGIN      
        1 ccatgccaga atgctgattg cctgtcggcg tgtggtgagg ccataaaaaa cctgacttgt
       61 cattagtgca tttcgcttga ttgtgttcac tgtgttttcg ggttgcatct gttggctgat
      121 catcaaaatg accattatgt actctaattc cctgaccctg tttttatttc cccaaagagt
      181 cataatgtag agcagcagac atctgcggaa agcagacctg aaatacgact tttatttgtc
      241 tgtcgcctct catacagatt gggtaaggcc acagtgtgtg
//
LOCUS       KCHQ01000125             544 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 14343cha ultra-conserved
            element locus uce-579, sequence.
ACCESSION   KCHQ01000125
VERSION     KCHQ01000125.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 544)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14343cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>544
                     /note="ultra-conserved element locus uce-579"
BASE COUNT          127 a          129 c          113 g          175 t
ORIGIN      
        1 catcacaagc tgatgacatg tgcgtttgca tggctggggc tctctttaga gatatttggc
       61 tttactcgat attctcagct tggtcacaca gaagacgttt ttttgaagca aggacctttt
      121 gatgatagga ggcaggcaac acaatgactt ccagcagcac ctcattgcaa cagtaccgta
      181 tcacaattag cagcgctaaa caggctgcac agacaagtcc actccatctc gtatggagcc
      241 tcatccagtc ctctccgttt tgtctgacaa atccccccat tgttcctctg atgatgcttt
      301 tctttcgtgg gaaccctggc ttgtcttgtt gattagatcc cctttgtctt cctcccctgc
      361 agtgggctag tctggagaat gtgaaacctc acactgtagt ggtggcttaa tgcctcagca
      421 tactcttttt ttttttatta aacgatgatt cagtcttata tggtaatgaa tataacgaag
      481 tttatttagg tcaccagccg tagcgttttg cgatttgtaa taacgaattc atccgtgcat
      541 tcgt
//
LOCUS       KCHQ01000126             252 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 14433cha ultra-conserved
            element locus uce-578, sequence.
ACCESSION   KCHQ01000126
VERSION     KCHQ01000126.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 252)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 252)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14433cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>252
                     /note="ultra-conserved element locus uce-578"
BASE COUNT           70 a           44 c           65 g           73 t
ORIGIN      
        1 ctgtttcata atgttcagcc tgatattgga gtcgtatgtt aataaaccag gaagatttgg
       61 ttttcagcgg actcactgct gtatatacaa cccactgtgg gattgtggat ggtagcagag
      121 tagacagctt caggcctgta aacagtaggt gggtttactt ctctcttctc tccgcgggaa
      181 ctatccatta acagataatg gggggaaaat cagagtgatt aaggcccagg gaattatggg
      241 tgaatacaaa tt
//
LOCUS       KCHQ01000127             359 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 14521cha ultra-conserved
            element locus uce-247, sequence.
ACCESSION   KCHQ01000127
VERSION     KCHQ01000127.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 359)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14521cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>359
                     /note="ultra-conserved element locus uce-247"
BASE COUNT          110 a           66 c           61 g          122 t
ORIGIN      
        1 tgttgttgta aatccagatt ttctttttct cttttttctt tttctttttt ttacagcaca
       61 cttgccaaca aactaaacta tctgttctac ttatttctaa aaaagcattg accgtcgggg
      121 catagccaat atggaggtta atccattcta gtgtctatac tatgggatgc ttatggaagc
      181 atatttgctt agggcagcca tgcaaattat tacttactgc cctgtaagct gataacacaa
      241 attagatacc cattaaagtt gaacaatgta tatagaatga gaaaagattg caagtgatac
      301 ctgaagggac gcttaagtcg tatggcacta aaatatgcct catgcttgca aacttcaaa
//
LOCUS       KCHQ01000128             369 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 14612cha ultra-conserved
            element locus uce-246, sequence.
ACCESSION   KCHQ01000128
VERSION     KCHQ01000128.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 369)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 369)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14612cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>369
                     /note="ultra-conserved element locus uce-246"
BASE COUNT           93 a           72 c          101 g          103 t
ORIGIN      
        1 gttctccttt tttgtgatat cctctaattt tgcccatgcc taggcaaatt tgtcgcggcg
       61 cgtgggcccg tttgatttca ttaaacagaa tatttaagca taaaaattgt ttaatcgtct
      121 catgtcatta ggagatggat ttcattttgc atacatttgc atacttcccc ctcaaattaa
      181 accaggcaaa tatgcaaatg cagaggccca ggttatggcg gaggtgttta ttgtcatcac
      241 ttcaggcagt tccacactgc agcgcctccg cagaacaggg gtgacagcaa catctggacg
      301 cctgggggct gggagggagg aaagggtgga ggcagaaggt gtaggtgtgg ggatgaaggt
      361 gtgtaatag
//
LOCUS       KCHQ01000129             519 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 14708cha ultra-conserved
            element locus uce-245, sequence.
ACCESSION   KCHQ01000129
VERSION     KCHQ01000129.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 519)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 519)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14708cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>519
                     /note="ultra-conserved element locus uce-245"
BASE COUNT          125 a          128 c          108 g          158 t
ORIGIN      
        1 tttccaatct ctctacttcc acatctctac cttccccatc ctcccccctc ctcagtctcc
       61 cctctcctga cgcgagtgct ggacttgagc agcaggtgcc atattactgt gtacagaaaa
      121 gcaattaggc agcatattgg atgaatgagg agtgcattaa tattagcaag tgcatttgtc
      181 agtggcgttt gatgcaagtc cttttctttt ctttctgcaa cattaagatt gtggcgctca
      241 taaattcact gcttaaacca ccatctgctg cactgtcagc ccacaccgag gagagaggag
      301 aggagagggg agccatttat tcccttctgt ctctctcact ggggaaagaa gagtgaaaga
      361 cagatagata agaagaaaat gcattcattc cctccctttc tttgcctttc tttttctttg
      421 ttccacaggg aatgactgtg tattaggatt tatggagatg cttggcgcac accaagcgac
      481 aatgctctta aatctggctc ttttcctatt gtctggagt
//
LOCUS       KCHQ01000130             572 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 14896cha ultra-conserved
            element locus uce-571, sequence.
ACCESSION   KCHQ01000130
VERSION     KCHQ01000130.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="14896cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-571"
BASE COUNT          113 a          200 c           75 g          184 t
ORIGIN      
        1 gtgaagtaca gtatatctcc cgaccctaac cagaaaattg gtttcacagc agttgcaaaa
       61 aagacagaaa agtgactgcc cacgtctatg aatcaccttc tgctgcctcc ctgtcttcaa
      121 acctctccac atctcttcac ctttctgttt tctctctcat ctttttacct ctgtccctct
      181 tctcctcaca cctggttttc ccttcctctc ccctctttct cctctcctct cttcctccct
      241 ccacctccat cacctgcttg cttcttcctc ccatctctcc tccttcctcc cacctgctct
      301 cctccacccc tcttcctcca accacctctc ctttctctct cctgccaagt caaaccaggc
      361 catcgggcct ttgaggacct gaaagtcatt taactcctgg tagataataa gtcttagaat
      421 atagctcctc tcagataata agctttatca cttgattgct ctgcacgctc cctactgtct
      481 ttggattcat gtccagggac ctactcaagc gaatcacact atttcctccc tggcaagtca
      541 aattaacact gtgtgtgtgt gtgtgtgtga ga
//
LOCUS       KCHQ01000131             498 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 15094cha ultra-conserved
            element locus uce-573, sequence.
ACCESSION   KCHQ01000131
VERSION     KCHQ01000131.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15094cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-573"
BASE COUNT          150 a          127 c          122 g           99 t
ORIGIN      
        1 cttttagggc acctcttggc ctcctctccc tcctccgcct caccctccct tcttccccct
       61 ccccacccgc ccctgggccc tctggtgtgt tgctcactcc attgtgtcag ccttcagaag
      121 tgctcagttt gagtggcagg ccgtcacaga tcagttccct gctaaagcgg cccggcaggc
      181 cggggtgacg ggccaggaag ggatctaagt ggggtttatc agcgcttctt aacgcctctc
      241 cggctccctg acacaaaaga gagggggtat taaacatcta aagcaaacca aaaagcgtga
      301 aagctcctta tagggccgcg ggattgcgga tgtgactgga gtctttaaaa aaaaaaacag
      361 taaaaaaaaa aaaaagaaag aaaagcgaga aagaaagaaa gaaagaaaaa taaggacaga
      421 aaaaagcaca caaatgcttc agcagtgagg aagcactgag ggaaaatacg aacgtacttt
      481 ctatcctgtg tggataga
//
LOCUS       KCHQ01000132             370 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 15178cha ultra-conserved
            element locus uce-248, sequence.
ACCESSION   KCHQ01000132
VERSION     KCHQ01000132.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 370)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15178cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>370
                     /note="ultra-conserved element locus uce-248"
BASE COUNT          105 a           85 c           91 g           89 t
ORIGIN      
        1 tgtgcctgta tacgagcaag tgtgtagatg tgtgtgagtg tgacgtcagg tcctatttca
       61 gccatggccg gtgaggaatg aagcatctga aagagtccat ttctcttgcc gcgctgcctg
      121 agccttactt accctaatga tgtataatag cctgcaacta cacttaacct gagcattact
      181 gtggcaaaga ctgagtggaa gaggcacatg catacgtgcg cgcgtacaca cacacagaca
      241 ggtctagttt ttctgaggac gctgtttacc aaaggctgtg agggctggaa acgacctggc
      301 acgttgagaa atgaaagact cgcaaatcgc actccatcaa atcaaatcaa accccaagat
      361 gtatattaac
//
LOCUS       KCHQ01000133             415 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 15271cha ultra-conserved
            element locus uce-575, sequence.
ACCESSION   KCHQ01000133
VERSION     KCHQ01000133.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15271cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-575"
BASE COUNT          104 a          110 c           92 g          109 t
ORIGIN      
        1 accctgcttt gggtcataaa cacctccgcc tgtctcccgt cttcttttct cctccacaga
       61 ggtgagttgg gtttgcactc tgttaatctt tcactacagg cctgcttgct tttacactgg
      121 cccactggag aacagaggag gggaatgaaa gaggggtagt aaaggacggg agtggataaa
      181 agagcaggaa gaaaaagcca tagagagggc cagatgggca ccttcacagt ccatttatca
      241 aacccaatgt ggccctcccc tcccctccct gctgctctca tgtcctaaac ccccatgtaa
      301 ttctgtaatg attttcatta tcatataatg accttacaaa gcctacagca gtttgcatgg
      361 tcagtacaaa actcgcagct gttcccttca gtgtttgctc gctggctgtg acaaa
//
LOCUS       KCHQ01000134             436 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 15446cha ultra-conserved
            element locus uce-577, sequence.
ACCESSION   KCHQ01000134
VERSION     KCHQ01000134.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 436)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15446cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>436
                     /note="ultra-conserved element locus uce-577"
BASE COUNT          118 a          116 c           98 g          104 t
ORIGIN      
        1 gcagagcaga gcagagttag cccattctgt tgatctgagc aggatcccgg agaaaacaaa
       61 actgcattgt tccccgcaga tggaagccag tgtctcctgg gtaacagcat taatctcccc
      121 ttttctcctg cttcctcttg tcggggccat aatcggtggg ctcctttcag cagccgagcc
      181 agcctcaaag cccaggctcc taactagcct cctaattagc tgcaattaca atgaagacaa
      241 catgatgaga taatagaaat ttgcaaaata atgacatacc acgggaaaat attcctcctc
      301 cccaagcacc atttttccct ccgggagagg cacaatggag agccggggcc cttctctgaa
      361 aacggggagc tcagaaaaaa tggtggcgca ttatgtagaa ttgaacccta ttgtctgcct
      421 tctggttgct tcaatc
//
LOCUS       KCHQ01000135             337 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 15539cha ultra-conserved
            element locus uce-576, sequence.
ACCESSION   KCHQ01000135
VERSION     KCHQ01000135.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 337)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 337)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15539cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>337
                     /note="ultra-conserved element locus uce-576"
BASE COUNT          112 a           80 c           62 g           83 t
ORIGIN      
        1 cgttacatat taaagttaag tttggaattt gtcagggtct ttcacaagca tttcattctc
       61 tgatgcagac cctttaatac caagcgacaa cacgttacca tgtttaaacg actgcactga
      121 acacacacac acattcacgc acgcccaggg taacacatgc acacaaacag acaagcattc
      181 gatgtaacaa agtcctctgt tgaccctgac atccaattta acaaacacca gtttaaagtc
      241 ctgttgacaa gaagcaggaa gcgagaagag aaagaggata tgacatgggg agaaatcggc
      301 tccttctgtt ccttgtcact ccatattatt gaagact
//
LOCUS       KCHQ01000136             206 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 15582cha ultra-conserved
            element locus uce-329, sequence.
ACCESSION   KCHQ01000136
VERSION     KCHQ01000136.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 206)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 206)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15582cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>206
                     /note="ultra-conserved element locus uce-329"
BASE COUNT           68 a           36 c           36 g           66 t
ORIGIN      
        1 aaaactttaa tgagcctgga tagagagcca taaaaactga tagcccctcc gtcatgaatt
       61 atatatccat atcgattttg tttctttgct ataagaattg caggtaatcg tatgttacca
      121 catgtaaagt gcacttccca agcgagtata aatattaact atcaaatata tatgaggtgt
      181 gtgtgcattt atgaccaagc tcatgt
//
LOCUS       KCHQ01000137             527 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 15642cha ultra-conserved
            element locus uce-324, sequence.
ACCESSION   KCHQ01000137
VERSION     KCHQ01000137.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 527)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15642cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>527
                     /note="ultra-conserved element locus uce-324"
BASE COUNT          125 a          135 c          122 g          145 t
ORIGIN      
        1 gcctttctct acttgccctc tcagggaact ttgttttggt tttggctacg agttgttgct
       61 tgtttgagga aatgtgcaga tatgtgtgtg cacaagccag agagaaataa ctggaaagga
      121 atgggcggca atatacagta agaggagggt gggtgggagg gaggggtgtc ggggtgtgtg
      181 caatcgaaca gcctcctgtc atgagaggct caatgctcac acgcatggtc agcaacacgg
      241 cctggggaaa cagttcattt acccctcgcc ttaaaccctc atcgctcttc tgtcttccct
      301 cgtctgtcaa catctccctc tcgcctggaa cggacagcgg ggtaaataga aaccaaatca
      361 tgcacactaa cacttcagtc acccaggatt tccagcaatc tttctgtctc tctcctcctc
      421 actctttctc acacacaaac tgtcctatcc tacttgcctg cctctctcca tattaagact
      481 atcctgctta atatcacaga aacgtgtggg tatgatgaat gtttatg
//
LOCUS       KCHQ01000138             573 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 15742cha ultra-conserved
            element locus uce-325, sequence.
ACCESSION   KCHQ01000138
VERSION     KCHQ01000138.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15742cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-325"
BASE COUNT          166 a          115 c          123 g          169 t
ORIGIN      
        1 tgcctgtcag gcctgatctc aggatttttt actttgctca ttatagaggc atttccattt
       61 tattaagttt tccctttttt ccaccctttg tcgctgaggg aaatttgcat acctctattc
      121 ctagggaaaa aaaaataatg acagcaattt cttttctttt ctctccccca ctagccgtgt
      181 gagtgcttcg tttagtggca cctgcgaaag cgacaggcgc agggatgaga agtgaaagag
      241 agcagttgat taaatcatca tcaagtcgca gcacagaaag tcaattctgc ttgccgtcta
      301 caatgatatc cttttatctt aaagtaatga gctatggcac ttttgcatcg ggtaatacga
      361 tgagttccat tagcatgttc catttgcttc acaagcaagg gcaagtcatt ccagccggct
      421 tctatcttgg caatcaaagc aattggctgc acagccaggg aacaggggaa aggagggaga
      481 gcaaaagaaa tggaacatga gaaagaaagg ctagtactgt ttttttttat ggatcacaac
      541 acagtggaaa aactaaaatg atgtccatta ttt
//
LOCUS       KCHQ01000139             320 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 15833cha ultra-conserved
            element locus uce-327, sequence.
ACCESSION   KCHQ01000139
VERSION     KCHQ01000139.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 320)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 320)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15833cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>320
                     /note="ultra-conserved element locus uce-327"
BASE COUNT           98 a           75 c           68 g           79 t
ORIGIN      
        1 ggaggcctat agggcctggt gcaggaaagc cattgatttg agatgaatac agtggctact
       61 ctcaggccct tcacagttat taggactaat agagaaacat aaaatagtga gagagagaag
      121 cacagatccg cacaaatgct ctaaatagct ggctactcca caggcctctc ggagagtttg
      181 gcttgcaatt tgcattcctt tgtgtgacaa cttgtaatcc tcccctcagc atgccaagaa
      241 acacacaaca gatttattgt cccagtcaac aaatcgttta agtcatccca aacctattac
      301 tactgcctaa tgcagtggga
//
LOCUS       KCHQ01000140             321 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 15871cha ultra-conserved
            element locus uce-320, sequence.
ACCESSION   KCHQ01000140
VERSION     KCHQ01000140.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 321)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 321)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15871cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>321
                     /note="ultra-conserved element locus uce-320"
BASE COUNT          101 a           67 c           81 g           72 t
ORIGIN      
        1 atgtgaaaaa aaaaggatca ctcaatgcac tcaacaatgc actggcagcc catacaaaca
       61 taaaaaggga gaggaagaaa gagagagcgc aagagagaaa attgagctta acagcctgat
      121 tcttaactat tatttatcca ttatgggggg aatggagctg gggcgctgtg agggagagga
      181 ttagagaaga tttgtgggct ttacaaggcc ctgtcctccc atccgcatcg ctccagctcc
      241 caggggctcc gcagccagcg ccggctcagc ttgtctgatc atttatccat aattagaaaa
      301 ttaatatttt agatggcgct a
//
LOCUS       KCHQ01000141             412 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 15932cha ultra-conserved
            element locus uce-321, sequence.
ACCESSION   KCHQ01000141
VERSION     KCHQ01000141.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="15932cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-321"
BASE COUNT          124 a           71 c           87 g          130 t
ORIGIN      
        1 agcacagaat gaaaaatgat ttgtattgat gcaaatcgtg tgtacggagt gaattataca
       61 caattaccca tcaatactgg ccagtcttgc ccaccctcac caacaagatg tggttaacag
      121 gcagaaaata agattgaaat ggtgtgtaaa gagttgaaaa tgaatttcaa tgctgcattt
      181 gtccacaatt accccgtcgt tcacacgtgt tttattggga gttttttttt tttttttctt
      241 caaatatttc tcaaagcaga ttggaaacat tcttggtatt accctctttc ttcagagaag
      301 aaagaattaa ggattttgtg acaaaaaaga gattttctct cctgctggag cgacggagga
      361 taacatggag gctcacagcg tgtttgattg ttaatcgtgg cacaggggct tt
//
LOCUS       KCHQ01000142             434 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 16032cha ultra-conserved
            element locus uce-323, sequence.
ACCESSION   KCHQ01000142
VERSION     KCHQ01000142.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 434)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16032cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>434
                     /note="ultra-conserved element locus uce-323"
BASE COUNT          146 a           63 c           80 g          145 t
ORIGIN      
        1 gctcttccga tctgaaacga ttgtaatgat aattgctaag tttaaaaaac agaaatctaa
       61 ttgtgcggat ccctctggag actaatattg gactatctta taaaaggcgc acagtatccc
      121 agcaatgatt tattgctgaa ttccagtcat tttcaataca ttatagtttc caaattgtgt
      181 ttaaattgag tgtagaggag aaaaggccat taggagatgc agaaatgaag attatattta
      241 aatattcatg cactcggtac cttattattg aatctgtaca ctaacaaaat caatattaag
      301 tgcagtttga cataaattta tttatgaatt tcgactttct aagtacttgc gttttttcac
      361 tcaaaaaagg atgagcataa tgctgtaatg atatcaaaac agtgtgtcag ggtgcattag
      421 tctgggagtt tatg
//
LOCUS       KCHQ01000143             524 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 16141cha ultra-conserved
            element locus uce-1249, sequence.
ACCESSION   KCHQ01000143
VERSION     KCHQ01000143.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 524)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16141cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>524
                     /note="ultra-conserved element locus uce-1249"
BASE COUNT          125 a          145 c          111 g          143 t
ORIGIN      
        1 ctcaaacgcc caaaaatcat gcatcaccga ccatcattct tccctcgccg gcatcgatgg
       61 atcttttttt ttgttttccc ctcgttctcc cccctctgtc tcttgtcctt ctcttttatt
      121 gctttgtaca gcaaagcacc attactgatc ccttccaaag cacaaactaa aaatctatcc
      181 cgttgtcatt tgctgcaccg tgccatctat catcgggggt gcttggcagc gtctccatac
      241 gagagaggag gtgctggaac aggaggcaga gtcaaggact ttcacgcgca acaaaaaact
      301 tgtcacaatt atttatggct cttgctggga cacataatag gacacatcaa actgctgttt
      361 ttttgtgtga tgagcgccct cacatcgctg gctcccttgt cgaagtgggt caccggcatc
      421 tcttgcctta cacatacaat ttccaagaca atggcggagc acttggggaa gtgacagtga
      481 caaatactgg agcccccacg gaaagctggg caggctgtta catg
//
LOCUS       KCHQ01000144             391 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 16180cha ultra-conserved
            element locus uce-1248, sequence.
ACCESSION   KCHQ01000144
VERSION     KCHQ01000144.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16180cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>391
                     /note="ultra-conserved element locus uce-1248"
BASE COUNT           93 a           89 c           81 g          128 t
ORIGIN      
        1 tcagtccacc cagcggttcc tccttcatcg tcgtcccacc ccgcggtata gtttcctgaa
       61 tcccaaacat ttaggacaat ttgcgtgaaa aagagcctcc tgcgaaatta gaggaaaata
      121 aacgtccaag cgtgttatcc tttagggttt gttttttcac gggataagtg gcgagagccg
      181 attcagactt gcgagggaaa acccggtcca caggtcttgc ctccctcttc agtccgtccg
      241 atgtgaacaa ttctcaaagt gctgtactta gttagagcgg tatccacaga ctggaaaagt
      301 gaattgttca atagacaaga ttttttgtgt tgctattgtt cctctttgtt tttctttttt
      361 tttttctctt ttttgtgcta ttcacagaaa a
//
LOCUS       KCHQ01000145             299 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 16247cha ultra-conserved
            element locus uce-1247, sequence.
ACCESSION   KCHQ01000145
VERSION     KCHQ01000145.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 299)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 299)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16247cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>299
                     /note="ultra-conserved element locus uce-1247"
BASE COUNT           79 a           87 c           70 g           63 t
ORIGIN      
        1 cacacacaga aaaaaaaacg ctccagtgac tccgcaggga gtgaaatgga ggggagtggt
       61 ggctcaaaga gcgagggagc cggggacggc ccgctccagc cgccagccgg cccctcctct
      121 gggaacacac agagcctaat gagtttgata gtctgctgag ctccataaat catgccatgc
      181 aaaacatttc tcctctctga ataaaagcat ttatcaccct ctgtttattc actcactctc
      241 acaagattga ttggctccca gcagcctgct gagcaatcag ccgtgccgat tcctctatt
//
LOCUS       KCHQ01000146             433 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 16344cha ultra-conserved
            element locus uce-1246, sequence.
ACCESSION   KCHQ01000146
VERSION     KCHQ01000146.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 433)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16344cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>433
                     /note="ultra-conserved element locus uce-1246"
BASE COUNT          105 a           95 c          103 g          130 t
ORIGIN      
        1 tctcccactc cttcttttta agcattttta agaaatcccg gtgctgaaac ctgctcactc
       61 tgcagtcatc taacagcatt tctgtaggat tagcctggac atggcctcag cctgtacagt
      121 tatgattatt gacatattgg gtctgacata tttcacattt atgtgcattg tctggaagca
      181 tactcaagtg ttctcaatgt catttctgct gaagtacggc cgggcagtct gcgagcaagg
      241 gccgcaatga attgatcatt gctcactgct cactttaata attcaagcct gattgccaca
      301 gagtgccgca gtaaaatgga ttgggagagg tcacatgctg cacagctcag gaggtgaagc
      361 ccctcgggga tggttaattc atatatgctt gatagacacg tgtcctattt agagaggtca
      421 gggtgctgtg tgt
//
LOCUS       KCHQ01000147             340 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 16392cha ultra-conserved
            element locus uce-1245, sequence.
ACCESSION   KCHQ01000147
VERSION     KCHQ01000147.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 340)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16392cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>340
                     /note="ultra-conserved element locus uce-1245"
BASE COUNT           55 a           72 c          126 g           87 t
ORIGIN      
        1 cagacccctg cctgggccgg ctggccggcc gggccgggtg acgggttgct gccctcctga
       61 gcctccgccg atggctccct ccccaccgcc gccaccgccg tctttatttt tagccatctt
      121 taaggattag gattgatgct gtgacgagca gggcacttac agtgattgta ctgtaaatct
      181 tctcttctgg gtggtggtgg tgggcggagg gtggttgggg gttgaggaag agggcaattt
      241 ctactatggg gcggatgtgc agggtttttc ttgtaagatt cagatgggaa ggagtgtgtg
      301 agtgacggat gtgtgtgtgt ggaaggagga ggtggcagag
//
LOCUS       KCHQ01000148             755 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 16468cha ultra-conserved
            element locus uce-1244, sequence.
ACCESSION   KCHQ01000148
VERSION     KCHQ01000148.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 755)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 755)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16468cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>755
                     /note="ultra-conserved element locus uce-1244"
BASE COUNT          237 a          151 c          143 g          224 t
ORIGIN      
        1 ggacaaggcc ctggtcatgt aatacacaat gtaacagcag cagcatggca tgccaccata
       61 cacatgtcct ctaagaatta agaaataaag cgtttcaggc tttgtgataa tgtttttgtt
      121 tataacaaaa tataagatga tatttaaaat ataattgtca tacacatctg tgaatatttg
      181 gccttttatc gtcttatcct ttaatgcaat atcaggatct tcgtcagacg aatggaaata
      241 cactacacct ttatatagcg agtgcctgga tgttgactac ttttgccaca gcagacagtc
      301 acataagatg ctttcctcgc aagcaaatgt attaccaaac caaaaagctg ctggaggtgt
      361 catgtaaata cctaaccaca gttaaagtaa tagcctataa agtgatcttt aagtggagtt
      421 ttaagcaccc ccataatggc tttggctgcc ttttagcaga ccatgtgact cccccagagt
      481 agtgattatg agtcacggat gaagaggtct tgtgtgtagg tcagcctgta agcctcactt
      541 tcacctgcca atctttactt tcctcgatac tcggagagcc ttgttctttt tactgttaac
      601 tgtcttacag caggtggtat ctggtaaatt atgtctacaa aacactttga caaaacttgg
      661 atatagcttt gtggaattcc tactggggag aaacgcctcc aaaattgaaa gacagaaggg
      721 aaaaaaaaaa attaaacagc cgtcttattt cacat
//
LOCUS       KCHQ01000149             643 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 16564cha ultra-conserved
            element locus uce-1243, sequence.
ACCESSION   KCHQ01000149
VERSION     KCHQ01000149.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16564cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-1243"
BASE COUNT          156 a          158 c           78 g          251 t
ORIGIN      
        1 tctttgtttt cttcttgcag gactctgatc taggaaattt ggctaggatg gcacttcatt
       61 accacagcaa atctctgaca aaccgtgcag tgtttttttc accacaacac taactcatcc
      121 atgataaaag tcatttttta ctactaacca atatctaacc aactaatgta ctaactaaca
      181 tcctaattct tcatcgttgc ttttggtttt tgttttctgt ccatccttat taacaacctt
      241 ttttgttcac tattcttttg atttcctttc ttcccctttt tctggaaagc aatcaggcat
      301 tggacacgct atggtaaaca aactacattg tctggtagat atcattctta ttgtcttttt
      361 tttgggtttg ccgtgtgtcc cctccccctc tcttctttta ttcgttctct ttgagttcca
      421 tcctagacac tcttatcaaa aaatgaggag atgggtttgt attaccaggc aattctttct
      481 tcgcttcttc tcaatttcct ccctgacctg ccaacaacct ccttctttac cccacaatcc
      541 cccatcttgt tttttttttc actttggctt ttactttttt ctctttgttt cctccacatt
      601 actgcagatt tccaacaagt aaaaaaaaaa aaagaaaaaa gaa
//
LOCUS       KCHQ01000150             460 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 16750cha ultra-conserved
            element locus uce-1241, sequence.
ACCESSION   KCHQ01000150
VERSION     KCHQ01000150.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 460)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 460)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16750cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>460
                     /note="ultra-conserved element locus uce-1241"
BASE COUNT          139 a           91 c          105 g          125 t
ORIGIN      
        1 tatatatttc tgcttttggc ctggatggtt ttttatctca gtggtttaga gcctgttgcc
       61 cccagggcca gatttaaatg tgtgtgggtc ttcaaggatt tctctgcaga aaagccgttt
      121 ggattgcagc ctcaacgcca tacaagtgcg accgaattgt gtcatttcag gtttttgagc
      181 catcgttgga accaaaggaa agtccaaaag agaagcaaaa aacacaagac aaaagctgat
      241 gaaaatggac cagattggat tatgtcagac ttggcatgtg cctcgttatg agggaagtct
      301 tcgttctgtc ttatcacact ctgccttaca gctaaatgaa ttaaaaaaaa aaaaaaaggc
      361 aaagcacagc tctgctcctt ggaaaacaac agccagatcg taactgtaaa tactggctta
      421 gagtggtgtg ggctctgcac gattttcagt cacaaaacag
//
LOCUS       KCHQ01000151             251 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 16837cha ultra-conserved
            element locus uce-1240, sequence.
ACCESSION   KCHQ01000151
VERSION     KCHQ01000151.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 251)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 251)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16837cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>251
                     /note="ultra-conserved element locus uce-1240"
BASE COUNT           62 a           42 c           59 g           88 t
ORIGIN      
        1 gtttcccatg gctagtttag ctgtctttgc atgtggggca cgtttgctaa catttcttaa
       61 ggcttggctt cattaatgca gacgattagc atcctgtgaa ttaattagtg tcagtgccct
      121 tcaaaatgct aatgctagca ttctgttgtc ttgaagagca gttggagagt ctgggcaatg
      181 atgcaaagtt cgtattttgg cgtcagctgt tttgatatca atcagttaaa agaatgacta
      241 tttcaaatgt g
//
LOCUS       KCHQ01000152             342 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 16928cha ultra-conserved
            element locus uce-1180, sequence.
ACCESSION   KCHQ01000152
VERSION     KCHQ01000152.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 342)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="16928cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>342
                     /note="ultra-conserved element locus uce-1180"
BASE COUNT           87 a           88 c           79 g           88 t
ORIGIN      
        1 ttttccattg cggcttacgt ctactttcat caccctgcat caagcgacct gaaagcactt
       61 ccctgtcgat gtacttggct atatctacgt ctgacctgtc tgccatatgt aatatcaaag
      121 cctctgtcag cgtggagctg aatgggaaca aaagagaggc ctccattaat gattaactgt
      181 tctaaaagcc ccggcttttg tattcccatg gtgcccaggc tatctggcca ccatgtgaca
      241 tgctcacagc atttttcgag cagattgggg gaaagctagt gagcaaacac aggtgctttg
      301 gagcagcgtt gccgacgctg tcagggacaa ccacaaacaa ga
//
LOCUS       KCHQ01000153             786 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17029cha ultra-conserved
            element locus uce-1181, sequence.
ACCESSION   KCHQ01000153
VERSION     KCHQ01000153.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 786)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 786)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17029cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>786
                     /note="ultra-conserved element locus uce-1181"
BASE COUNT          191 a          187 c          186 g          222 t
ORIGIN      
        1 tctcctccta ccttgactgc gtctctctac acgtctttgt ctttttctac ccaccccttt
       61 ccctctaaac ttcccctttc tttctctggc ctttccacgt cttaatgcat ttcacttgtc
      121 tctcctggct agttttgtgc tcttctactc agccaacagg ctattatgaa gaatatccag
      181 tcagcactga gtcttatggc agtatttccc aactgtcact gagaaggaag tatgcaacag
      241 ctacactgtg ggtggtcagg taaatcctgt gtctaccttc cactgtatgt ctatgcattt
      301 tgaaaaggac taatgtcatt tatgttacag tttctcagtg agggcttatg ccatttgtga
      361 gccggagtca gttcagtctc atagcttcag cagggcagcc gaagtcactt gtgctacaga
      421 gggagggagc ggtttctttt attcaattgt tttccacttc cacgagcgtg tgccaagggg
      481 gaggaaagcg ccggcttaac acgctctgca attcaacacg gccagacgca gtcctattaa
      541 gatttaatgt gccattcttc tgcttgtgcc gctgaaaaag acttgcaggc tgaggaagag
      601 agtgaacaaa gagcaggcag agccagggcc agggagagat gaagagagca agagaaaccg
      661 agacaaccgc tccacggcca ggtctttgtc acatgactga agtcagtagt ttcaaaggga
      721 tgctacatag tggaggggga aataacaaca gagtcgttga tatagtgttt tcactcagtg
      781 cgtgta
//
LOCUS       KCHQ01000154             216 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17125cha ultra-conserved
            element locus uce-1182, sequence.
ACCESSION   KCHQ01000154
VERSION     KCHQ01000154.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 216)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 216)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17125cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>216
                     /note="ultra-conserved element locus uce-1182"
BASE COUNT           62 a           69 c           40 g           45 t
ORIGIN      
        1 ccaccccagc ccctgctcca tgccctcctc ctaatccccc tcccttctag accagcatgt
       61 ggatgtgcgg cgagcccacc atgcttcagt gcagtctata atgaaatgct tatatttaca
      121 ggcacagctg agcatgtcag acagagcccc tgcaatctcc ccaaataaaa taaccaaaaa
      181 taaataaata aagggttcaa ccctgtgagg cggagc
//
LOCUS       KCHQ01000155             790 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17183cha ultra-conserved
            element locus uce-680, sequence.
ACCESSION   KCHQ01000155
VERSION     KCHQ01000155.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 790)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 790)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17183cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>790
                     /note="ultra-conserved element locus uce-680"
BASE COUNT          210 a          178 c          205 g          197 t
ORIGIN      
        1 cttttcacaa aggcagttgt aatatagcac taggtgagca ctgtacttga cgtacacact
       61 ggaggtgagg gtgtcagggg agagctcgct ggagcgagag gaggttttat tgttgcccag
      121 cccttccgct taagtgcaca tggctgggag gaagccggga cctccagctc tgacctctgc
      181 gcatgtatat ttaataggcc atcagttggc cggggcagcg ctctgatcag gattcagaga
      241 ggggctttga acacccctgt gtattcctga gcgtgcagcc tcaagctgct ctccccagct
      301 gtgtcaatcc gacagcactg ttacaggcac ccagacaagg cgctgggcac tccactgcta
      361 ctgcctaatg actacaggaa aaaaaaaaag caaaacaaac acaaaaacaa taacatttgg
      421 cgtatggagc tctgctacca tctaatgagt ggttttaaaa actgaaatat tacgccagct
      481 gatatactgt agggtgagtg ggatgtgttt agattacatc agctactcta tacaatgcta
      541 tgttcccctt aataataaca aaatggcaat ctcacggtga ctgcactaca cacgccggta
      601 acgattgtag aaacaagacg gcaaacagag aagtgccact cgtgtgtctt ttcttctaac
      661 aaggtatcac tactctttga atcaaatcgg ctccgtgtgt gggtgtgtgt gcatgtcaca
      721 gtgcatgcac gtgtgtgtgt gtgcgtgtgt gagggcagct taacgagggt ggttcatttg
      781 acaggcaatt
//
LOCUS       KCHQ01000156             585 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17263cha ultra-conserved
            element locus uce-1184, sequence.
ACCESSION   KCHQ01000156
VERSION     KCHQ01000156.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17263cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>585
                     /note="ultra-conserved element locus uce-1184"
BASE COUNT          179 a          124 c          128 g          154 t
ORIGIN      
        1 atgataactc agagcgtcct gctgtaatta tggtattcat gaaaagatga aatagagtgc
       61 agactaaatc tgtagctcca ggcaaaatca acagcttggc attacgcagt gacccctgcc
      121 tatcttgagg acacggcaaa cataccaaaa ctttttctgc tttttttcat cagtcaagag
      181 tgagggaatg aagtgcatcg attgcttgtg attattaact agactgagat aagccctctc
      241 cttattatgc agattactga ggctccccgc tccagcatat tgtacagatg caagggagca
      301 gctgctctta cagatggtgg gtacacggat ctatcattat gcctccattg tctccacttc
      361 aattgtttgg gggacaacag aactgcatca aagaggaatc cgactgcaat gaattaagaa
      421 agagaaacga aaaccatcaa ctaaatttat acaccggagg ccgtggaatg gagaggagcg
      481 taaagctgaa gctatttcat atatacaacc atggagtcgc ccagtcatgt atactgtacc
      541 caaatctgtt ggatgcagca ctgtgcacca gacatatgtt gtttt
//
LOCUS       KCHQ01000157             427 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17354cha ultra-conserved
            element locus uce-686, sequence.
ACCESSION   KCHQ01000157
VERSION     KCHQ01000157.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17354cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-686"
BASE COUNT          123 a          100 c          110 g           94 t
ORIGIN      
        1 tgtatgtgtg tgtgtgtgtg tgtactcgaa caagcattaa cctaagcatc gactattacc
       61 acgatcatca cagagactag cagggggcat gtcaggatgc gactagacac gaaaacagca
      121 cagaaagcaa actgaaacaa caacagaaac aacaacaaca cgctgcatgg ttcatgttga
      181 actcaccccc gaggtccctg atgggtggat gacttcagct gcaaagtcac tttgactcag
      241 tgaatcagga atcaggtaac gggatcaggc ttcattaggt gacttcagcc gagctggcag
      301 acggccaggt gagctggacg cacaaatgga cattgatttt tcaataaggg ccctggagct
      361 gtcagccaac caggctatgg tgatatcttt tctcatgggg atggccatct cctcatgatg
      421 gcctgac
//
LOCUS       KCHQ01000158             224 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17450cha ultra-conserved
            element locus uce-799, sequence.
ACCESSION   KCHQ01000158
VERSION     KCHQ01000158.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 224)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 224)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17450cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>224
                     /note="ultra-conserved element locus uce-799"
BASE COUNT           66 a           49 c           47 g           62 t
ORIGIN      
        1 ctctgcccct ctgtcgctcc ggagcctgcg caacacattg gaagaaaggg agagaagtat
       61 atactacaac cgtttgatga gcagcagggc aataaattca ttaatcatca ttatatgcct
      121 catcaaactc tttgccagcc tctccatggg agttacacaa attagccagt gaaaaaagca
      181 gtaattttag aggagctagg taagtgcttt ttgattgctt tctt
//
LOCUS       KCHQ01000159             349 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17550cha ultra-conserved
            element locus uce-1187, sequence.
ACCESSION   KCHQ01000159
VERSION     KCHQ01000159.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 349)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 349)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17550cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>349
                     /note="ultra-conserved element locus uce-1187"
BASE COUNT           81 a           99 c           69 g          100 t
ORIGIN      
        1 tgtttatatg gagctctggg gtgtataaaa acgtattaaa tgccataatg gaagacgggg
       61 aggccacagt gttaggactg cgtagatcta agcctccttt tttttttcgt tgggagggag
      121 cttttcttat tcaaaacagc cccacaaaag acttccagtg agccttgcca catccccatc
      181 tgacttgggg ccattcatca gccttccaag cctatcaatg acatgtcccc atcagggctc
      241 ctataaaatc agcccctttc ccatgaaaca tcagcaaaca ttttgacggg tctggctttc
      301 cccccgctgg atttctggag tctctacccc cctttcctcc cttattccc
//
LOCUS       KCHQ01000160             510 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17670cha ultra-conserved
            element locus uce-1189, sequence.
ACCESSION   KCHQ01000160
VERSION     KCHQ01000160.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 510)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17670cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>510
                     /note="ultra-conserved element locus uce-1189"
BASE COUNT          148 a           97 c          105 g          160 t
ORIGIN      
        1 tgcagcatga tgagcttcag gtaatgagat ttctttcttt ttttttcccc ctccataaaa
       61 atgcatatat aacgttctgg aaacaaactc ttcaaatgca gacatcaaaa caaatggtga
      121 attaaggcac ggcactcact gccttgttct gagagcatgg ccttgagcta gcgattttca
      181 aactgtgcca ccgttaattt atgcgaagat ctgaactaat tctttggcaa ctgtgaagcg
      241 agaatattaa cgcgatgtat ttccttgtcg atgataatgc tgcgctctta atttgagatg
      301 tgcggtgtag tcgaacatga aatggaaatt tgccccaaac tatgtatttg tcactgagtg
      361 tcggatgtgg aatgaggtta catgcatcct ttgctaccca cactcttaag atacaagaag
      421 aggtgtattc cccctcgctg cggtgtgtta tatggaggaa cttaaagcct gctttagaat
      481 acagtatatt tacatagata tatatatata
//
LOCUS       KCHQ01000161             573 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17845cha ultra-conserved
            element locus uce-688, sequence.
ACCESSION   KCHQ01000161
VERSION     KCHQ01000161.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17845cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-688"
BASE COUNT          181 a          129 c          114 g          149 t
ORIGIN      
        1 gatgctgtgt gacagcaaat gaaataagag cataaacaaa aaacacaata tccatatttc
       61 cacacttcca caaaaacaga aatgtgatat tacctctcct ctgtgctgct gatgagcatc
      121 tgcctaaaga tgatgaaatc attattgtgt acacatatgt gtgtgcgtgc caagtgtgtg
      181 tgtgtgtgca cgcgcgtgtg ctgctatcca atctggatcc ctggacgcac acgtgcacag
      241 gcctctctcc tccaattcac ctctattact agctataatc ccatttcaca ctctatcgat
      301 cctcaaaact gttgttcacc ggaaccagca gcaaacactg gcatttctcc ccatcatttc
      361 accaccattg ttctttatta cacaaagaag cccccctttg tctcagagca aactcagccc
      421 tgctgaaata tgaattataa atgtatggct aataaaagag aaggggggaa aagagagaga
      481 gaaggggaga gagttagaga tagagagaag tggttggtag aaacatcaga gaaaatgact
      541 cctttacaag agtctattga tcagtttcta tca
//
LOCUS       KCHQ01000162             344 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17893cha ultra-conserved
            element locus uce-1067, sequence.
ACCESSION   KCHQ01000162
VERSION     KCHQ01000162.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 344)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17893cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>344
                     /note="ultra-conserved element locus uce-1067"
BASE COUNT           97 a           80 c           62 g          105 t
ORIGIN      
        1 atttcacatt tagcatttgc attcccctcc gcataaacat ttcattcttc ccctcctgca
       61 gtacaatgag acttgagtga ctttggcagc agattttgga tcggtgctcc tgaatccacc
      121 agtgtatgtt atcagcaggt aaacaagctt tcgaacaaag ccataatgga actgcaagcg
      181 gcataaagag gctcatctca aaagctatac aacccatcaa agctggtgtc atttcctcaa
      241 tactgcactg cagctggaaa atgcatggct gttagttaca gtttaaatcg cctgtctatt
      301 ttcagacact tcagaactat ttgtattgat tatttacttg tcag
//
LOCUS       KCHQ01000163             233 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17908cha ultra-conserved
            element locus uce-1066, sequence.
ACCESSION   KCHQ01000163
VERSION     KCHQ01000163.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 233)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 233)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17908cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>233
                     /note="ultra-conserved element locus uce-1066"
BASE COUNT           37 a           78 c           47 g           71 t
ORIGIN      
        1 cctctttttt tttctcctcc tgtcggctgg agtagaggag actaatttag aagttgcaga
       61 tttgagctgc ctgaattggc tagacagctg taatcgcact ccctcctagt cttaatctct
      121 ttatctggct agcagctgcc atatggcccc cgtcagctgg atcagatgtg ggtaagcctc
      181 cctccccggc cgtcccagcc tctctctctc tctctcaccc tctccctccc tgc
//
LOCUS       KCHQ01000164             270 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 17977cha ultra-conserved
            element locus uce-1065, sequence.
ACCESSION   KCHQ01000164
VERSION     KCHQ01000164.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 270)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 270)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="17977cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>270
                     /note="ultra-conserved element locus uce-1065"
BASE COUNT           63 a           61 c           79 g           67 t
ORIGIN      
        1 ggcccctctc tgccgctcaa gggcccttga ggcggccatt atctggacgc ccgcctcgct
       61 gaggcatatg ggtaattact gagctaatag agtgatggag ggagaggcag aggcaggagc
      121 ctaggccaat tagatgatgc attagtgctc tgtcttttgt aagcacctaa tgtgtgggga
      181 aaggatgggg tagatagaga aaacgtgtca tttctgaagg gtcaggatcc ttgagcaaat
      241 gcaaacagtc tctctctctc tctctctctc
//
LOCUS       KCHQ01000165             610 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 18075cha ultra-conserved
            element locus uce-275, sequence.
ACCESSION   KCHQ01000165
VERSION     KCHQ01000165.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 610)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 610)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18075cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>610
                     /note="ultra-conserved element locus uce-275"
BASE COUNT          176 a          129 c          125 g          180 t
ORIGIN      
        1 atgctctgta aatggcttaa tttgtctgaa gacacacagc aaaggcagtg ctgtgctgca
       61 aactgtattg actcaaaaca catgatttaa tacatattaa tattagatga ataactcatt
      121 aatggatgca tcagacaaat cataatactg tgtcataaat agattaaggg cttttaagaa
      181 tttatgggat atcggattat tttcccagaa cagtaccgtg ttacagatcc aacttcctgc
      241 catgaaagtc ttacactgta ctgtagatgc aggtaaataa tctctcctct tttttccagc
      301 tagttactct cactgtgggc tgggagctga tctctgctcc agacactttc aagtctactt
      361 aatgtagcct acacgggctt cacaggctgt ttcatgctct tatggaaaac aggcctttga
      421 aatccctcag cagcccaatc ttaatctcat ttgtgaatat gagccgagcc acgacaggac
      481 caggaacatc ctcgtcttcc taaagcaccg tttcatttgt caggagattt ggggcggttg
      541 acactagagg agtgatttaa ttgattttaa tcacacacct gagataggga gagcgagggg
      601 gctgccctta
//
LOCUS       KCHQ01000166             247 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 18172cha ultra-conserved
            element locus uce-1063, sequence.
ACCESSION   KCHQ01000166
VERSION     KCHQ01000166.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 247)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 247)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18172cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>247
                     /note="ultra-conserved element locus uce-1063"
BASE COUNT           88 a           47 c           61 g           51 t
ORIGIN      
        1 aatgcaaact gccttcaatc ccacagagca ttaggattta aagtgagcat gaaacacaaa
       61 cccttcaagc agattaaatt tcaaatcaag caggccatgt aaatgatgtg gtgacagggg
      121 gcccagtgca attagcatgc caggctagtg ttaaagcaat taggcaaaac agacggctag
      181 agcacaaggg ctaagcatgg gaaaggagga aggacgaata tttccatatt gttcttcagg
      241 acatgag
//
LOCUS       KCHQ01000167             459 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 18259cha ultra-conserved
            element locus uce-1062, sequence.
ACCESSION   KCHQ01000167
VERSION     KCHQ01000167.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18259cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-1062"
BASE COUNT          133 a           57 c           82 g          187 t
ORIGIN      
        1 aggaaacacc agagaagtgt tttcctctag ttagaaaaat tgtttgaatc aagtcgatgg
       61 cagtcggtta cattgtgtat ggaatactct acctggcttg taactgacta gaactgtgat
      121 gtacagatga tgtattatta aaatctgaag caagtaatgc aatgatatta ggatacagtt
      181 tttgtatttt tattcttgta taaggttatt tgatggctat tgtttagcct ctagttcatt
      241 ctgtgttatt taaattctaa tatatgaatc atatttggat tgaagtcatg ttcaggggcc
      301 atgttgtgta tgtattgaga tgtaaagcct ttgaatgtga ataattattg taaactataa
      361 tattttacag cttttttctt actatatcat acattttcta tttgctcagt gatttaatca
      421 tattctgata atttaatgaa tctgttcatt ctctctctg
//
LOCUS       KCHQ01000168             772 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 18353cha ultra-conserved
            element locus uce-1061, sequence.
ACCESSION   KCHQ01000168
VERSION     KCHQ01000168.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 772)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 772)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18353cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>772
                     /note="ultra-conserved element locus uce-1061"
BASE COUNT          182 a          200 c          167 g          223 t
ORIGIN      
        1 aatttctcct cagcatgggt gttggaagtg agaacagcac ttgcagccaa acatgtctat
       61 caatcattta ttgggattct gacatcctgc ctcgaaaatg ttgccatact atcacagtat
      121 caacactctg cgtccttttg cacatggttt agcattctca caatgccagg gcacaaggaa
      181 tgaattaata ttcatcgctg gtaatttatg gattcattta tcacccacat cttatttgtt
      241 tctgttaatc gaccctgggg gtctgactat ggccttggct ggccaccagt gctggagctt
      301 tattcctctt cacacaggcc tagtgttaac gccgctggcc aagttcacag atttgactga
      361 ctgtggactt aatgccgctt gccttgtttt cagcacttgt ccctccagat ttgccaccct
      421 ggctgcacaa tttcctccaa ttctaattat tcatcagctc gttatgcctg cgcctgggtg
      481 cctcccctaa ttagaggcga cgcagggttt ggtcccaggc tagccccgag tgagggaacc
      541 agttcagaac cagtccgcag cgtgcgctca tggaggactg ggtaactgcc agcctctcca
      601 agtgcacagg ggagaggaag ggcctgtctt gacagtgtga tgtgacgtgc cttcacacag
      661 tctttctcat acacacacaa actaatcatt ctgctaggtc ccatatctat tagcataacc
      721 tctagatatt tataagaacc ctggaacaat gaaaattctt tgtctcagtg gt
//
LOCUS       KCHQ01000169             389 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 18453cha ultra-conserved
            element locus uce-1060, sequence.
ACCESSION   KCHQ01000169
VERSION     KCHQ01000169.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 389)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18453cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>389
                     /note="ultra-conserved element locus uce-1060"
BASE COUNT          110 a           85 c           70 g          124 t
ORIGIN      
        1 gtgttgatta acgcagcact ggcatgtgcg gtgctaaagg attgcgaatg cacaccgact
       61 ggattcctca tcctttgact taatgaattg attccagcac atcattaaca tgccccactc
      121 tactgctcca tacacatatg tcttaattag ctgctcattg gctgtttaat tacaagaaaa
      181 cagctgacag ctgccaagtt gctttataat ggaagccatt atggaaacag gctataactg
      241 ccagtgacaa gcagcactct ttaataatgc tatgatttat ggtccaaact tttgtactcg
      301 cacatatcat taaaggcctc tctgccttgg actaattagc aatcattaaa gatagatttc
      361 agcagtttat tctttagtgt tttgttcct
//
LOCUS       KCHQ01000170             562 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 18591cha ultra-conserved
            element locus uce-95, sequence.
ACCESSION   KCHQ01000170
VERSION     KCHQ01000170.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18591cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-95"
BASE COUNT          147 a          127 c          109 g          179 t
ORIGIN      
        1 ggtgccattt agccagcaag ctttcagcga tcccagcctt ctttctaacc ccctccctcg
       61 ccctctaccc ctccaaaaaa tcgaagcata atcaaggtgt atgtttagaa aatttattgt
      121 tataattttc ccccataatc tcttccattt tcctgcagcc acgctgacat agatcatcat
      181 ctaaaaagag aaaatggata gcagtttaaa atttatcggt ctttgattct caattatacg
      241 tgtttatgac ttcatctgtc ttcagtgact tcaacctttt ccattatggt ggaatattgt
      301 ttgtacggaa tccattaaat tcacaaggca ggactctaat ggtggggctg cagcgatttg
      361 cagagggaaa agttttgaaa ggttggcttt aggaaaagcg cggctgttat gacacaagaa
      421 attgctttat tgatggtctg ctctgctgcc tgtgcatttg gccatttgtt acccggccca
      481 tatctatatc tcaggctgac actgatgaga acttttctgt tgccctctcc agattatcga
      541 gttgtaatga cacagacagg ca
//
LOCUS       KCHQ01000171             210 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 18660cha ultra-conserved
            element locus uce-93, sequence.
ACCESSION   KCHQ01000171
VERSION     KCHQ01000171.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 210)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 210)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18660cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>210
                     /note="ultra-conserved element locus uce-93"
BASE COUNT           56 a           35 c           53 g           66 t
ORIGIN      
        1 acacacacac acacacacac attggattgg tcccagcgcc tgccatctgc gtgtgtttgt
       61 atgttggcct attgtaccag ggaatgtgtt atattaatgt gtgaaagtga atgaatgggt
      121 gttgaaatga atcttttgat atttggaaag tacagaaggt caggctgtta catgctgtca
      181 gggccaacgt tgtttctttg aagaaagttt
//
LOCUS       KCHQ01000172             244 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 18875cha ultra-conserved
            element locus uce-90, sequence.
ACCESSION   KCHQ01000172
VERSION     KCHQ01000172.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 244)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 244)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18875cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>244
                     /note="ultra-conserved element locus uce-90"
BASE COUNT           80 a           44 c           58 g           62 t
ORIGIN      
        1 ctctctatcc cagacacatc cctaaaagac acagtataat gtatgaccta accttcaaat
       61 gccaggagag tgttgggcaa taaactgcca atatttgtgg cttaatcaca tcagatgact
      121 tttactgtaa ttggaatggc agcgaaatag ctgggatagt gcaagactga ggtctaagac
      181 aatcagtaag tcacagggag tttctgtgat ggctataagg attaaattgc aggtgaacag
      241 aggg
//
LOCUS       KCHQ01000173             661 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 18975cha ultra-conserved
            element locus uce-927, sequence.
ACCESSION   KCHQ01000173
VERSION     KCHQ01000173.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 661)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 661)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="18975cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>661
                     /note="ultra-conserved element locus uce-927"
BASE COUNT          169 a          166 c          145 g          181 t
ORIGIN      
        1 cctagcagtc accggctttt tcctttcggc aaccgcacag tgcctagctc gagagcagga
       61 gaggctgggg tttttatcaa gccgagggct cagaccacca gaggctcttg tgaaggaagg
      121 aaattaccgg gtgcaaacat tcacaatacc ccaactcaat tccccctccc tcatctctct
      181 cttttccttc tctctctgac ttccactctc ctgtccctat gtttatcagg ttttggggca
      241 ctgtattttg atgtcaataa gcaatttttc ttgcctggtc tcctgcctga cccctttaat
      301 ccatcaatat attattagag ataaagtttt gtggacgcct gctgcagtca caagataaat
      361 gacatctctg aagtcacgca ttaaagacta gattaaggcc ttgtgactgt gtcttcagtg
      421 ctcatctgtg tgcctctgtc caacctatca cactaagtga caagaaagaa aaataatgaa
      481 ctgaggcaga aaaagcaaag agatatttct tacacacaca accggcgtct gtcttcagcc
      541 aggattagga cgcattagag gcgtgctgga gaagggtaga gaggcagcaa gggagcgtcc
      601 ctgtttgtgt ctgtctcggc tgaaagaaag ggaatttcag ccctctgtcc ctttcgaact
      661 a
//
LOCUS       KCHQ01000174             400 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 19067cha ultra-conserved
            element locus uce-924, sequence.
ACCESSION   KCHQ01000174
VERSION     KCHQ01000174.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19067cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>400
                     /note="ultra-conserved element locus uce-924"
BASE COUNT          127 a           70 c           61 g          142 t
ORIGIN      
        1 gaacctcttt gactttgcga aataattgag ttaaaacact cgataaaaca ttaattagct
       61 tagcagtctg gagcagataa catagataaa accctatgta attcatattg attagaatat
      121 gcacattgag cgtaacctct taagacaagt tttccttatt aaatggacac aaagcccagg
      181 tcattattcg tacaaagatc gctctagatt ttatcttttc acataaaaag gtttgattgg
      241 atttctttct gaggaagctg cacaatctat tttattctgg tttgattgta ttacctctta
      301 attagtttgt atattgagta gaacaggcct tattgatttg aggtgcattc atttgcattg
      361 caaaaatccc ctttaatcca atataatctc atccttactc
//
LOCUS       KCHQ01000175             315 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 19166cha ultra-conserved
            element locus uce-925, sequence.
ACCESSION   KCHQ01000175
VERSION     KCHQ01000175.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19166cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>315
                     /note="ultra-conserved element locus uce-925"
BASE COUNT           76 a           92 c           54 g           93 t
ORIGIN      
        1 agatacagcc ggtcgatttg agaaaagtct acgccgatct ccctatctct ccctctctgg
       61 tgcgaccccc tattctctct ctcttttttc ctctccctct ctgcttttat tatctcagat
      121 ttaataaagc caaggcgagc agcttgttct gccatgaaac atttattagc tgtctgttat
      181 aaaattgttg tgggggagga aagatgatgg ggtctcatct cacattatgc aaaaacagtg
      241 gcaatatcac cccctcctct cacacataca catgcaccca gacaaaaatc tgcccctccc
      301 tgcagctgga tccct
//
LOCUS       KCHQ01000176             363 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 19267cha ultra-conserved
            element locus uce-922, sequence.
ACCESSION   KCHQ01000176
VERSION     KCHQ01000176.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19267cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-922"
BASE COUNT           85 a           89 c           85 g          104 t
ORIGIN      
        1 ttaatgctat ttaaagagcc actgcttata tcagcacaga tgttatacca gaccaaagat
       61 agcgtctgca ttgctctgct gttaactacc accgggactg tttcttctag ctgttgcagt
      121 agcctgtaaa aactttttca aaaacttttt tttccctttt tttttttttt gccctctgtc
      181 ctaggtcgca gctgacaggg cggagggagg gccgggtggg cagaacaatg ggagtgcggt
      241 gcagggattg tgggagagaa tctaggctgg agccacagtg tctggagcgc ccctccactc
      301 ccctcatcca gcttttgttc agctgcaaaa gctatcagca cttcctactg acaccaacaa
      361 taa
//
LOCUS       KCHQ01000177             277 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 19367cha ultra-conserved
            element locus uce-923, sequence.
ACCESSION   KCHQ01000177
VERSION     KCHQ01000177.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 277)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 277)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19367cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>277
                     /note="ultra-conserved element locus uce-923"
BASE COUNT           85 a           75 c           53 g           64 t
ORIGIN      
        1 gcatgcagct aattaatctg atgaatattt ataaccactt aaacacattg taatggactg
       61 attaagcagt ccaacgctgc gagtttgaat tagtgcagtt tttgaataat gacagagtaa
      121 ctttccatct cactgctaat gttctccctt tgcaacagca gcctaccctg ccgcctatgc
      181 gccaatcagc caagcgttcc cccagcaacc aaccatcatt ccccagcaac agagggaagg
      241 taagagcgag caagcgcgcc cacccaagat aaaaggt
//
LOCUS       KCHQ01000178             373 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 19465cha ultra-conserved
            element locus uce-920, sequence.
ACCESSION   KCHQ01000178
VERSION     KCHQ01000178.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 373)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19465cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>373
                     /note="ultra-conserved element locus uce-920"
BASE COUNT           82 a           65 c           61 g          165 t
ORIGIN      
        1 tgatacaaat atggctgcat ttgtacaagc gaaaaagaca aagcaaatca tgtagtttat
       61 agactcatcc tttgtttcta cttttagttt aatttgaatt ccatatggat tttttttctt
      121 ttctcccctc tgttttcttt ttgctttttt ggtttgttta tttctcctta gtctctggac
      181 aaaatatgta gctttgatac taaaagaggt cattgtcttt ttcccatttc gctgcggaga
      241 acattccttt ctcctttttt ccttttttct ttctttcctt ttttttgttg atattgcata
      301 cgtgtcactg attgaaatgg aaggtaggta atgctttgcc tacgcacgtg atctttatgc
      361 agatgagaat gtg
//
LOCUS       KCHQ01000179             491 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 19561cha ultra-conserved
            element locus uce-921, sequence.
ACCESSION   KCHQ01000179
VERSION     KCHQ01000179.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19561cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-921"
BASE COUNT          132 a           88 c          141 g          130 t
ORIGIN      
        1 taagcagctt gcaatgttca ttttacccgt agcagaagag gggagggata aaaaaaacat
       61 atagtgtgag agatgggcag acagccctgg gaggacaata gctgttggct tggaaatgct
      121 tcttgattat taaaatctaa tgcattttca gcattgcagc cttcattaag ggtacggatg
      181 ggggggggtg agagagggat gagagggtac tgggaggagg agaggatggg agagggagag
      241 agagacaggg gctgagtctg tcctataact cctgggccca agacacatgc agctagaaga
      301 ttggctcggg cctctcctag ggatcgacaa tgtgtcattt ccacccggct agattgccct
      361 ctgcctatct gatattaatg tgcaaatcaa tatttcaggg attaaatttc ccttcttcat
      421 tttttatggt ttctacctca ataagtctcc cgtctaatag aggaggctgg atgatttaga
      481 agcctttgct g
//
LOCUS       KCHQ01000180             392 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 19734cha ultra-conserved
            element locus uce-884, sequence.
ACCESSION   KCHQ01000180
VERSION     KCHQ01000180.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 392)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19734cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>392
                     /note="ultra-conserved element locus uce-884"
BASE COUNT          112 a          112 c          101 g           67 t
ORIGIN      
        1 cgcgagatag agagaaaagg aaaaaatgag aaataaataa ataaacaaaa aagcagacca
       61 agatggactt gaaaggggat agaaaaagtc tgctgcagtg aggggggatg actgcggcgg
      121 tcccagcggt ccccagcggg acctaggggc aagtctcagc cttgtcatac tccgctcttc
      181 tcctcctcca ctccacacac cagctccagc cacccctcct tccaccaccc ctgttctgcc
      241 cacggaaaac gtcgatagca ggctgccggt gccgaggtct ctggtggaca ctagctcatt
      301 ctcctggcat cgacaggccc gccaaatcaa tatttagttc cccactaaca agctgcctcg
      361 gggtctgagc cagagagaga gagagagaga ga
//
LOCUS       KCHQ01000181             434 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 19820cha ultra-conserved
            element locus uce-887, sequence.
ACCESSION   KCHQ01000181
VERSION     KCHQ01000181.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 434)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 434)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19820cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>434
                     /note="ultra-conserved element locus uce-887"
BASE COUNT          129 a           95 c           86 g          124 t
ORIGIN      
        1 gtgacatatg aatgtatagc atgtattgct gaacagataa tacacaaaag tttttttttt
       61 gtgcctatat ttttattttc atatacagag gtcaagctat actaaccagc acaggttaat
      121 taaccagata tacaacaata tatataacga aattataagc cggcgtttta aaacactgtt
      181 tcttgctttc tttctttcac tttcactctg tcaaacacac acacatacac acgcggcacg
      241 tgctgtgtgc cgaacagggc taatgagggt tgtatgttgt ggcggctggt tgggtcgaca
      301 cagatcgagg tgccttcagc cgttacaaat ctgtttggct tttgtccact acacagcaat
      361 taataacact ggggctgggg gcagggaagc aaaggtcacc cattcagcct gacatacaca
      421 cacacacaca caca
//
LOCUS       KCHQ01000182             308 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 19906cha ultra-conserved
            element locus uce-886, sequence.
ACCESSION   KCHQ01000182
VERSION     KCHQ01000182.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 308)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 308)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="19906cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>308
                     /note="ultra-conserved element locus uce-886"
BASE COUNT          103 a           59 c           70 g           76 t
ORIGIN      
        1 cacacacaca cacacacaca tgcactcaca cacacaggct cacagccaaa tggctgttca
       61 ttaaagacag ggacctgagg ggaagcaatc gtctgagaga cggaaattgc gtgtcacatt
      121 agattagcag tgtaaagcct ctggattggc tcgggggaat aaggaattat ttcaattaca
      181 ttatttcaaa aagtctttaa gcaataccaa taccgataaa aacaaattaa gagtgatttg
      241 ggctgatttg tggcgctctg agctgtgctt tctgacaatg tggtggaaat cagatatgaa
      301 taatgtag
//
LOCUS       KCHQ01000183             828 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 20000cha ultra-conserved
            element locus uce-881, sequence.
ACCESSION   KCHQ01000183
VERSION     KCHQ01000183.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 828)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 828)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20000cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>828
                     /note="ultra-conserved element locus uce-881"
BASE COUNT          236 a          165 c          211 g          216 t
ORIGIN      
        1 agtcaatgga cgccaacctc tctgtgtgct ttcacacacg aagtgagaga acccgaaggg
       61 aaaggacgag gacggggaca agagcgaaag acgaggggat catactgccc aaaaatgttt
      121 gcagagtcga tattgaacac cgctgttgag gttactattt atctcatgcc agccaagttg
      181 gcacgcacat ctggcgctgg gtacttagtg caattattta tgatttcctc caagatttaa
      241 aagctcttcg cccggccttg taatgcagta actgattgca ctgctaatgt aattaagggg
      301 agattatgat gtccacgtgg cacaccagat ggtggcattc acagcgatgg gggaaggcac
      361 aactggcaca ccactgcaca agggcagtga ggcgcagtca gtcggagcag tccagactcc
      421 ccaccagacg gaggaaagta tatgtgtgta tgcttgcgtg tgtgtgtgtg tgccgtgcat
      481 gcacggatgc atgtgagtgt atgggtgtgc gtttgatgat aagttgagcg ataaagtgta
      541 agctggtaag ggatgagtgt gtgcaatata ctaccaaaga aattacttaa ggtagactga
      601 ccctctttag aagctcgaca tggacccaga ctttaaaaaa tgttctgtat acgtccaata
      661 aagatccgct gcttcatctg ggaaagttat atattatcca cagggatttc aagaactttc
      721 tccttgtttt gatgtgattt atctttaact acaaatgtga agaaattaat ctgacagttc
      781 ctacattttc aacttgtgca agtcagtgct tcagccaaga aaacagat
//
LOCUS       KCHQ01000184             396 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 20095cha ultra-conserved
            element locus uce-880, sequence.
ACCESSION   KCHQ01000184
VERSION     KCHQ01000184.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 396)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 396)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20095cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>396
                     /note="ultra-conserved element locus uce-880"
BASE COUNT          127 a           79 c           99 g           91 t
ORIGIN      
        1 gggagggaaa acagtaagta atgaaaaagc tatgattgct tttctgtccc tccaaatgac
       61 agttagcacc tcaatgacct gctcggggca gggccatcta gaaatgacac gctaaggcac
      121 aacgtcatct aacagggtag ttacaaaaat caatacaaaa cccatttcaa agatgctcgg
      181 cgagcgtgtg tgtgtgtgag actgtgtgtg tgacagagag agagagagag agaaggacct
      241 gctgttatgt tcatttattg agtaggcctg aggggcagaa aacaaacttt tctgatatac
      301 acattacctt gcgagcaaag gaattctgaa ggctaagcaa taactgcatt cccagtctat
      361 tacttaagtc atgaagagcc ccctccacag aagggg
//
LOCUS       KCHQ01000185             296 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 20181cha ultra-conserved
            element locus uce-883, sequence.
ACCESSION   KCHQ01000185
VERSION     KCHQ01000185.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 296)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 296)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20181cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>296
                     /note="ultra-conserved element locus uce-883"
BASE COUNT           92 a           73 c           61 g           70 t
ORIGIN      
        1 gtttgcacca atcccatcac tcactcagag tcgacaggcc ggccattccc aacccaccac
       61 agtctgcttt tccaatccag tcaacaaagc ccaggccctg gcactgtctg tttagctaga
      121 ggggaaaact gtcaggaaaa gtaagacgaa tgagctgccc tgattgacta tttccttaga
      181 tactgaatca atgggcttat tatcaccagc aattacagta ctaatacaaa cagatgcttg
      241 gggaaagaca tctgcttaga gagatgagac aactagattt tcagtcaata gagtga
//
LOCUS       KCHQ01000186             352 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 20228cha ultra-conserved
            element locus uce-929, sequence.
ACCESSION   KCHQ01000186
VERSION     KCHQ01000186.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 352)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20228cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>352
                     /note="ultra-conserved element locus uce-929"
BASE COUNT           86 a           85 c           75 g          106 t
ORIGIN      
        1 aacagagcta gtgacctcct tttcccctct ctttctctgc tcattagcta tcctgaacct
       61 ctttctctcc tgctttcagt tttcaaaccc ccaaatgaga cctaaatcgc ttgcaataca
      121 ggttagcttg aggaaggggg gggggcaaac atctgtcgtg ctaggtaccc gcacgcagct
      181 cggggtatct cctgcgagga actttgggga tgtttaattc ataaacgctg tcatccatgt
      241 aaacctcctg atttcataat gactaactct tggtggttta attaatttaa taatgccttt
      301 cagaagccat aaatgaaagg gtctctgaag tggtgcatta attagccggc gc
//
LOCUS       KCHQ01000187             371 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 20576cha ultra-conserved
            element locus uce-392, sequence.
ACCESSION   KCHQ01000187
VERSION     KCHQ01000187.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 371)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 371)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20576cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>371
                     /note="ultra-conserved element locus uce-392"
BASE COUNT           94 a           96 c           55 g          126 t
ORIGIN      
        1 tcctcctcct cctcctctgc tctgatttca gcatgctaat ttagtcagtg ctcctcagca
       61 tgattccctc gctctctctc ccattcttgc tgcgattctg ctccctcccc tctgggacct
      121 gaagattaat attcctgggc ccaacaagat aattactgat actaattaga catgattatg
      181 tgaatttgat acacttatta ctctagataa tgagtaggac atattatcct aacaagcacc
      241 cgtgccgctt agtttacttt acacacgacc cacactctat attttctgtt attgtcacct
      301 caatcagaaa ctgatattct cttgtaatta ttgaataaaa ggccttgatg tgcgatacct
      361 ttaagatgtg a
//
LOCUS       KCHQ01000188             325 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 20665cha ultra-conserved
            element locus uce-395, sequence.
ACCESSION   KCHQ01000188
VERSION     KCHQ01000188.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 325)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 325)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20665cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>325
                     /note="ultra-conserved element locus uce-395"
BASE COUNT           97 a           91 c           76 g           61 t
ORIGIN      
        1 gggccgcccg tcatgccgga caggaagctc tacagcctgc agcacgttga cgattagctg
       61 atggcccact ttgtcgtacc acagcttcac ctgggtggga cacaaacaca gacaaacctg
      121 atgctgcatc tctattccaa aacatcaaga gcccagcaca ctcaaaacgc acacactcac
      181 tgagagttgc cccggcatta actgtggagc atcttggagc atcccgggac tggagggaga
      241 caggacattt aaggacggtc tctccatctt ctgggactca aaagaactgg aacctgctat
      301 gaagacaaac caaaaaaata agatt
//
LOCUS       KCHQ01000189             393 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 20759cha ultra-conserved
            element locus uce-91, sequence.
ACCESSION   KCHQ01000189
VERSION     KCHQ01000189.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 393)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 393)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20759cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>393
                     /note="ultra-conserved element locus uce-91"
BASE COUNT          114 a          106 c           83 g           90 t
ORIGIN      
        1 aaattaataa acagcaactc acccgcgcgc acacacacac acgcaccata gatacagttc
       61 accccgacac aaacatgcca cacagacaga acgtgctaca atctctgtgt gtgaagggga
      121 cagacctgtg tgtgaagctg tattggagag ggctctccgc ttcggaacat cctgaaacac
      181 tcggctaagc tggggctggc ctgagccctc tgttaaaaac aatataccac acactatgtt
      241 acagcacttg tgtgtttctg ctcttttaca gctagactat atggtgccct acgatggtct
      301 gcaaatatat ggaatgtgtg gacgcttcca tccaaatgca cattacagga ccataaatgc
      361 attgatcttc accatctgtg gccccaacag gag
//
LOCUS       KCHQ01000190             221 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 20859cha ultra-conserved
            element locus uce-396, sequence.
ACCESSION   KCHQ01000190
VERSION     KCHQ01000190.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 221)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 221)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20859cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>221
                     /note="ultra-conserved element locus uce-396"
BASE COUNT           88 a           33 c           70 g           30 t
ORIGIN      
        1 aaatgcagtc ccagttgcac aagcaccatg ccagcacaga atgacagagg gtactgtaca
       61 ccgaatcact gtgtagtagg gagggagcga gagaggtaga gagagaatag atgtagagtg
      121 tgacagtagt gaaacagaga gagagagata gagagaaaaa gacagtcaga gaagcgttac
      181 aaggacccta aagataggag taagaaagca gagcgtgcaa a
//
LOCUS       KCHQ01000191             558 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 20949cha ultra-conserved
            element locus uce-399, sequence.
ACCESSION   KCHQ01000191
VERSION     KCHQ01000191.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="20949cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-399"
BASE COUNT          172 a          107 c          109 g          170 t
ORIGIN      
        1 atacatttta aaggaccgtc attatcgctg cgggttaccc cccggccccc catcaccaac
       61 cccacaaacc attttcattc caaactcatt aatatgcaaa cttattcaaa tgagattgta
      121 attaagcatc tactgagtgg gaaccctttt catgataatt tatgataaac tcctcggcac
      181 ctttgattga gattgatttt tggcgcaggc aaggcgacct gaatacaaag ctacacctga
      241 gagacctgga gggagaataa cacttttaaa acagcaaact tatttcatgg ctgattgtgc
      301 cacaatcatc ttggaggagt aacaaagatc tatttgaata atgcgttcct actgtgattg
      361 cgatgtgttc agcctaaaaa aaaaaaactt gggcatatct gttcttggca tcgaagtgac
      421 aaagtgatgt gtgtggatgt gtgtctgtgt gtgctttata atggaaggta aaccaagcat
      481 tttattggaa ggtttacaac ctttgctgac tgaaattgac actttatgaa aatattatct
      541 gtttatgttc ataaagat
//
LOCUS       KCHQ01000192             210 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 21036cha ultra-conserved
            element locus uce-1341, sequence.
ACCESSION   KCHQ01000192
VERSION     KCHQ01000192.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 210)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 210)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21036cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>210
                     /note="ultra-conserved element locus uce-1341"
BASE COUNT           44 a           30 c           58 g           78 t
ORIGIN      
        1 cacaggaagc agcagttttg tcattagtct tcaaacggtt tgcaggtcat caataattct
       61 ctttaatttg ctttatctca aaaggctgag gctggtggtt tatgtgtctg tgctttggtg
      121 tgctgggcat ctatgtgtac atatgtgcat caaaaatagt aagagtgtgc atgtgcgtgc
      181 gtatgtattc gtgtgtgtgt gtgtgtgtgt
//
LOCUS       KCHQ01000193             343 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 21126cha ultra-conserved
            element locus uce-867, sequence.
ACCESSION   KCHQ01000193
VERSION     KCHQ01000193.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21126cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-867"
BASE COUNT          106 a           80 c           65 g           92 t
ORIGIN      
        1 ccccacaaca aagctccgtc actctctctc cagttactaa attcaattta ccattgaaat
       61 ttgacggaca aaagaaatgc taatttaaga ccagaggact gctgcactga tccaattttt
      121 ctctttcact tgagtcccac aaggcaataa cacattgcag taatttaagt gcagtacatt
      181 caagggaatc tcacagtcat aataaatatt tcactgctct gaatcatcaa gttaagattg
      241 gcccgggcta aatgtgtccc aaccaggggc tgaaacggac aagggcaagc agtgagcctc
      301 gtctcatttc atctgatgtc agaggacagg gcatgattgt ttt
//
LOCUS       KCHQ01000194             445 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 21190cha ultra-conserved
            element locus uce-866, sequence.
ACCESSION   KCHQ01000194
VERSION     KCHQ01000194.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21190cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-866"
BASE COUNT          118 a           85 c          143 g           99 t
ORIGIN      
        1 caattagttt gcggagctgc tattgacagc ccctgtgctt gtgtttgttc aacagctctg
       61 ggtgagttcc acgctccctg ggctacgtga caaagcacct ccgacaggga gctcctgatc
      121 tccaccgagg ctcggaggct cgcactgtga ggggggtgga tatgtgacag cctagcagag
      181 agaagagagg agagagaggc ggagagatac aaaacccaca agggtctatt agggggttgt
      241 tgcaagttaa tgtagctaca acacactttt ttgtgtcgta ttttgaaagg cctgagcaat
      301 gatgttgtca tttgttgttt gattgcgggg atagcggagg gtaatcttag gagacacgcg
      361 ggctctcaca ctacatgcac acacataaaa atgcagaaag agaggagaca aggaggtggg
      421 ggaaagctag agggagatgg aggag
//
LOCUS       KCHQ01000195             463 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 21409cha ultra-conserved
            element locus uce-863, sequence.
ACCESSION   KCHQ01000195
VERSION     KCHQ01000195.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21409cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>463
                     /note="ultra-conserved element locus uce-863"
BASE COUNT          141 a           99 c           98 g          125 t
ORIGIN      
        1 tctttgtaaa aaaaaaaaaa atcttctccg ttttcctctc agatgaaaca aaccgacacg
       61 catgctggaa atgttttgtc tgttcaaccg agattgcaaa tatctttttt gcacagaact
      121 cactctgctt tttttgcaca gtttcaagtc gcttattaga acttaacccc tgattacacg
      181 caccaaggcg atttaaatct gattatcaaa ttaggagact ttgagacaaa tcctcttaga
      241 tctgatactg ttgactggag agggaaaatg gatctccaca cccgtcacgt aggtaacgat
      301 gctgtcctga aagggagttt taaaccgtat ttgacaacaa atgcagctgc cccgctattt
      361 cagaagatat tagaggaaaa tgaatgcaaa tctgtgtgca ggagccatct ggacgtggag
      421 agagggagtc agctgctcca cacactgagg cgcggagcct gaa
//
LOCUS       KCHQ01000196             412 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 21471cha ultra-conserved
            element locus uce-862, sequence.
ACCESSION   KCHQ01000196
VERSION     KCHQ01000196.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21471cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-862"
BASE COUNT          122 a           93 c           83 g          114 t
ORIGIN      
        1 ttttacatgt aacacgtcca cgtattcatc acgctcatgc atacatctta cagaaaaacc
       61 ctcttgaccc aaccttatta tttctaatta aaaaaacact gtcagctatt gcagtttaac
      121 tgaccaaatc agacatatgt ccacacattt tggaaagtct ttggccagag gtgccatctt
      181 ttccattgag cctcgatgca tgttgggata ttcaggtcat cgagttgcaa agtgttgctc
      241 aggcgttgac aaaagaaaaa tcttaagttt attaaacgga acaggctgac agcccacact
      301 ttgttaggca gtgaatgaac agagtggttt tgacaggcct aacctcttaa gcttcgggtc
      361 ccactgagct cggcacagct agagctaaat gggacccgaa gcttaagagg tt
//
LOCUS       KCHQ01000197             773 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 21656cha ultra-conserved
            element locus uce-860, sequence.
ACCESSION   KCHQ01000197
VERSION     KCHQ01000197.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 773)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 773)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21656cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>773
                     /note="ultra-conserved element locus uce-860"
BASE COUNT          205 a          215 c          138 g          215 t
ORIGIN      
        1 gatgtttaac gagttagaca aaatcctgag tttacaggac caccaactag caggtgccag
       61 tctgtaacaa tgccttttct gtcagtcatt ttccccaaat tttcgcttaa aggaactcct
      121 ctgcagcact tccagttgcc aaattcttaa agattgagga agtggatgat gtatgagcat
      181 gagccagcag tcgatcgatc tgtcggcgtc cctcgctaac ccctttcatg gctggcatca
      241 ctgcagtccc tcagcctttt acccatcccg ttcccctgct tgcccctata ttggcccccc
      301 ttccttttgc tttttttttt tgttccattt ggttcatttt tgctgtccct tcctttcttc
      361 ccttccagaa agtgatgcac actcgcaaaa gacattctga gctgtaccat gagctcaacc
      421 actcgtccaa gttccacacc atagacaggt atagcaggga cccagccatg tccacattca
      481 aggtaagacc attgcctaaa cacaggatgg gaacctgctg tacccatgca cttccacccc
      541 cctcgcactg tcacaaccct aaaaccccac ccctttaaca ctgaagaatt gacactggaa
      601 aacaaacgct gacctctgag cagattaaaa ttgcagaagt atgctttaca gaaaatggca
      661 aaacattatc agcaccacct tgacatttcc tttgcttgta aaggcagtat tcagatgatt
      721 agtcgtaaaa gctcccagtc atatataaca taaggtactt ttgaaagagg ttg
//
LOCUS       KCHQ01000198             376 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 21754cha ultra-conserved
            element locus uce-918, sequence.
ACCESSION   KCHQ01000198
VERSION     KCHQ01000198.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21754cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>376
                     /note="ultra-conserved element locus uce-918"
BASE COUNT           92 a           92 c           95 g           97 t
ORIGIN      
        1 attatggtca ttggcaccaa gtctgaaagc tccctttatc ccccccacgc tccagaaata
       61 ggccctgctg aagcacacag gcagcccaga tcaaacgctc cccataggga aggggtcatt
      121 actggtacgc agggcggaca cagccctatg ggtgctgggc cacgccttga gcccaaattg
      181 cagcctgggc ctagtgagga cacaagactg ttctttgatg cagtgcaaga gtaacagcaa
      241 tacaggctgt ttggatatca atgtttacag tgagctgtgt actgtacata cacataaaca
      301 gccaatactg tgctgggctt gattgggtgt tcacatgttt ctcatggttt atatttattt
      361 gggtgtcact gctgtt
//
LOCUS       KCHQ01000199             381 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 21938cha ultra-conserved
            element locus uce-868, sequence.
ACCESSION   KCHQ01000199
VERSION     KCHQ01000199.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 381)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 381)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="21938cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>381
                     /note="ultra-conserved element locus uce-868"
BASE COUNT          124 a           72 c           94 g           91 t
ORIGIN      
        1 aagaagaagc ctacgcagct cctaagtaac ccctaacata aacaggcaag taatcaatgg
       61 agagggcaag caggcagaga gggctgggaa aaaaacaggg tggagagagg gagacgggga
      121 gagaaaataa aaattgttca attactgggc aaacacgttt tttctctttt tttgaacaag
      181 tgattttgca gtgcaaatca atgttggcag gtcaggctgc ctgctactaa tcttggcatt
      241 acaactctcc aatcagaagc tctcaggtaa tggagttgtt attgaacttc atagtctgga
      301 ttagattctt gccgaagatc aatgctgcgc caagatgaga ctgataaacc cttgatagca
      361 atctgaatcc ctgaagccat g
//
LOCUS       KCHQ01000200             216 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 22122cha ultra-conserved
            element locus uce-1118, sequence.
ACCESSION   KCHQ01000200
VERSION     KCHQ01000200.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 216)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 216)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22122cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>216
                     /note="ultra-conserved element locus uce-1118"
BASE COUNT           74 a           45 c           55 g           42 t
ORIGIN      
        1 agaccgagtg tgagggcagg cgaggaagtg aattagggcg gcgattatgc agtgattcag
       61 acagcagctc attaggaccc agctaagcaa gcaatcaacg aatcgatgtg acagtggacc
      121 caaaagccac agaaatttgt aataaatggc aaagcgataa attggattat ccacagcccc
      181 atggccaagc tctttctgtt gcaaatgaca aatcaa
//
LOCUS       KCHQ01000201             283 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 22221cha ultra-conserved
            element locus uce-199, sequence.
ACCESSION   KCHQ01000201
VERSION     KCHQ01000201.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 283)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 283)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22221cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>283
                     /note="ultra-conserved element locus uce-199"
BASE COUNT           90 a           41 c           66 g           86 t
ORIGIN      
        1 acaacaaaat gatataaatt accactgtta tggtctatac ggttcaattt aatgtgcttg
       61 taatgataaa ttattttggt tatgaatcta aagtggacct gagtgcagtc agagcagcag
      121 gactgttaga acaattgcag ctgtctccca gggctgtggc cattagtcaa taaattagaa
      181 agtaattagt ttctgcttct gtggctctat ttgaagcgct tcacacaggt gtaatgaaaa
      241 tttattggag ctgttgatcc ggaggagaaa agaaaagtag agg
//
LOCUS       KCHQ01000202             213 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 22413cha ultra-conserved
            element locus uce-196, sequence.
ACCESSION   KCHQ01000202
VERSION     KCHQ01000202.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 213)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 213)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22413cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>213
                     /note="ultra-conserved element locus uce-196"
BASE COUNT           72 a           42 c           46 g           53 t
ORIGIN      
        1 tttgcaattc atagaattgg taatttgcta ttgggacaaa acgtgaaggg aaaaataatc
       61 agatcaactg ggagaggtag tgaggaagga gccaggagga agaaacacaa tcacgttctt
      121 aaatggaaat gcggggcttt aaacaaatct tacatctctc ccgttccatt cgcctaaaac
      181 tctgcaatca ggcacatgtt ccactccttc taa
//
LOCUS       KCHQ01000203             284 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 22502cha ultra-conserved
            element locus uce-1111, sequence.
ACCESSION   KCHQ01000203
VERSION     KCHQ01000203.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 284)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 284)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22502cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>284
                     /note="ultra-conserved element locus uce-1111"
BASE COUNT           64 a           47 c          110 g           63 t
ORIGIN      
        1 ctctggctgt aacggagagt gcacctggat gggcaggctt cctggacacg ctgtgagggg
       61 ctattgtcct gcatgtcagc agcccctctc ttttaatggg gcccgtatat catcgttctg
      121 attatggcag atgactggga cttggggaag gaggggttgt gatggtagat gtgggagaga
      181 cgtatgtgtg tgagcgagag agcgaaagaa agagagagtg tcttggggag ggaggtggga
      241 tgaaggcgag gtttggggac agaggcttaa aaacgcaggg accc
//
LOCUS       KCHQ01000204             347 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 22595cha ultra-conserved
            element locus uce-1110, sequence.
ACCESSION   KCHQ01000204
VERSION     KCHQ01000204.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 347)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 347)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22595cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>347
                     /note="ultra-conserved element locus uce-1110"
BASE COUNT           82 a          106 c           65 g           94 t
ORIGIN      
        1 ctaggaaggc tagataatgt aataccccct cccctccttc taccctgcac gttaccccac
       61 ggtgtgtgtg cccaaggcag tgggcgccct ggctcctgtg actagtgggt ttgctccctt
      121 cagcagcacc actcatctcc ctctttaatg tcatttagct gcggggtggc cagcgcctca
      181 ctcgcccatt aatcccattc caaatgccat aacatttccc aaaaagcccc tgcttcttaa
      241 agccgataat tagaatgtct atttaaagtt caccgctctc ccttgccgtt atcaattaaa
      301 agccgtttaa aggagatcgg tggcaatcgt caacaaatta aatctct
//
LOCUS       KCHQ01000205             363 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 22785cha ultra-conserved
            element locus uce-192, sequence.
ACCESSION   KCHQ01000205
VERSION     KCHQ01000205.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 363)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22785cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>363
                     /note="ultra-conserved element locus uce-192"
BASE COUNT           77 a           72 c           77 g          137 t
ORIGIN      
        1 cctctgatag gccagatcca gggtgcactg aagcctttcg catatatatg gaatttttga
       61 atatctaaac cattatttag catccaaatc agttctgctt gtctgactga tggacaattt
      121 cagtgtgacc ccggtctttt tgcatgtgac ctatactgtc gggattcttg catattgttt
      181 ggatgttcac gttgactctc ccgttttctc tttgatcctt ttagcatgct ctttgtgttg
      241 gaattcatga aatattcata gctggactgt ggcttttcca tatctttatg tacaattatt
      301 ggcaggcgtc ctgttatgtc gagccatctt aatagtaggt attgggctcg gttaagtgtg
      361 act
//
LOCUS       KCHQ01000206             294 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 22961cha ultra-conserved
            element locus uce-190, sequence.
ACCESSION   KCHQ01000206
VERSION     KCHQ01000206.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 294)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 294)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="22961cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>294
                     /note="ultra-conserved element locus uce-190"
BASE COUNT           76 a           54 c           69 g           95 t
ORIGIN      
        1 acacagctgg aatgactctt cgcagactaa tgtaattaat agctttttat ccatgtagaa
       61 tttgaaatga agatgtaaat tgttcgttta acatagccat aggacatgga ggcttctgct
      121 gtcaaagtca attacagact cagcatagtc ccagacttta tgaaaaccta atcaagatgt
      181 ggtctctctc tctgtgtgtg catatgtgtg tgtgtctgga cactagatga gagtacaagc
      241 ttgtgtgcat gcagttgtgt ctgtgcgcgt gcatgtctgt gcagcgtctg tctt
//
LOCUS       KCHQ01000207             400 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 23053cha ultra-conserved
            element locus uce-751, sequence.
ACCESSION   KCHQ01000207
VERSION     KCHQ01000207.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23053cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>400
                     /note="ultra-conserved element locus uce-751"
BASE COUNT           99 a          117 c           84 g          100 t
ORIGIN      
        1 cacacacaca cacacacaca ccagtcaccg atgcaacatc ccagcatgcc ctctgtctct
       61 gcacccctgt aattctacat attgcttaaa gtatgtgcta attaaatttt ctgtcggttt
      121 gcaagagaaa taaataatct gcagctaaaa ggcctaattg cgtttgtcac attgtgtctc
      181 ggtggctggg acatcgggag cacagccgct gcccttgctc attgccattc tgtcgtcctg
      241 gcaagccccc gcgctgcccc aggtatcacc acgcggccat ctggagccga catctgtctc
      301 tctattgatc acaagggttt agcacttgat caaacagact gcgacaggaa attgctcttt
      361 tccccacaga aaaggccaat cgcctgcgtg tgggtaatag
//
LOCUS       KCHQ01000208             229 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 23237cha ultra-conserved
            element locus uce-753, sequence.
ACCESSION   KCHQ01000208
VERSION     KCHQ01000208.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 229)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 229)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23237cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>229
                     /note="ultra-conserved element locus uce-753"
BASE COUNT           54 a           61 c           30 g           84 t
ORIGIN      
        1 ctatcacttt tttctgtgga gataaactgt aattacttta atctgcttta acattcctca
       61 ttcctctttt tcctgaccct gtctagttct ttccattctt ctctctcttt acagacgttt
      121 atctttcagt ctaccaggca ggacaggtag acacaggtac tgctaaattt acaaacaagt
      181 actgtaacct taactgaagt ctacttctcc cctgagcctc tccacatgg
//
LOCUS       KCHQ01000209             907 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 23328cha ultra-conserved
            element locus uce-752, sequence.
ACCESSION   KCHQ01000209
VERSION     KCHQ01000209.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 907)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23328cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>907
                     /note="ultra-conserved element locus uce-752"
BASE COUNT          272 a          196 c          175 g          264 t
ORIGIN      
        1 aagcttcaga taagtgatct acaagccact gcatgggctc tttgtattgt ttgtattgtt
       61 cagcattttg aagtcgttct ctgcagcaaa gaacaccact gcatctgttt ccggcattac
      121 aaagcctgtc ttactccggt acatcacact gtgatgcttt agttgcataa acaaatggac
      181 agtgatgttc tttcaagacc tctgaaccct gtaacacaaa cagaaagggg gtatccacat
      241 aggttgcggt aaaggacatt gttcgatcaa attgaataag aacggtctta ggaaacacat
      301 acaccaatct tttggtattt gaccgggtga cagtctgaaa ttttgttttc cagttttctc
      361 acttacaaca tttgttttga ttgcaagttc tttactagag ccgctccact tatgtttgct
      421 gtcaacatag aaaccaatgg caatcctcac catcgcccct ggtctattgg caaaaggctg
      481 ctgtcatcat ggcttccggt taggtcagcc aaggatcaag gggggcaaag gtcacacaca
      541 cattgtaagg tgaaagccaa ggccaaacgg gacaggcagt catcttagcc agtcatcttt
      601 agcctcaatg gactctcagc ctcagcccgc aactggactc tttcaaattg aaacatcaag
      661 gacttttgtt aatgttgaat ataaaaatat ataccaacgt taaaaagaca tttcacatga
      721 aaatgttagt ctagtcctaa tgcttaagat aaaactacac tagctaggtt tgtggtgatc
      781 atttgtgatt agcttttttc tgtggtgcaa ataaatcaga aaattcacac cttcaaagca
      841 tggctcacca agttaattat tatccaagag aactttgcaa tccatgacaa gaaagccctg
      901 ctttcaa
//
LOCUS       KCHQ01000210             368 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 23422cha ultra-conserved
            element locus uce-755, sequence.
ACCESSION   KCHQ01000210
VERSION     KCHQ01000210.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 368)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23422cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>368
                     /note="ultra-conserved element locus uce-755"
BASE COUNT           82 a           85 c           94 g          107 t
ORIGIN      
        1 ttgtgcacag attgtttgtg tgaggtagag acacctccac ctccgaggcc ccttctcctg
       61 ttgtgtttct ctgtgatctt gcagtcatgt atgtgattgg attttggctt aacaaaaacc
      121 tgaaattaca cacctattgt gtttcagcta agcccgcttt cactgctata ggggcaggct
      181 ctgcacagct ctcttggctg ctgacttttg gaatcccgcc ccttgtccct tccaggttgt
      241 tgaaggaaaa ggataacagg attaggtcag ggtttctggg aagcatcgat tgccatattc
      301 ggcaggccgg taaaaaagaa gttgcgacat gggtcactag ctacgaggtg agacaagctc
      361 ggccttta
//
LOCUS       KCHQ01000211             700 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 23512cha ultra-conserved
            element locus uce-754, sequence.
ACCESSION   KCHQ01000211
VERSION     KCHQ01000211.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 700)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23512cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>700
                     /note="ultra-conserved element locus uce-754"
BASE COUNT          177 a          184 c          172 g          167 t
ORIGIN      
        1 aagatcttat ccataatctt ttcttcctgt ctcaaccttt tccaggccca cctcgaggcc
       61 tttaacctca ggctcgacct gttcctctcc ccctgcacca ctctctcact cttctctgcc
      121 ttcatcccca ttcgcttccc attaccttag ccacaaccat tctcctccag ccttatcccc
      181 atttaaagtc ctttctcttt ccctgctggg gctggagagg ggccgaagcc acagcatctc
      241 cccatcagtt agccaggagc cagagatccc agccagagat gccatctgat acaagtctat
      301 cataatgaag gtccagcatg gggctaaatg agtttccacc tcagccgcgc gaggggctaa
      361 tgacaaaaca gcctccctgt gctccttggc ctgccgctag ctttaatcag ggcatatggc
      421 acttgcctaa actgcttggc tatgaggaac agagaggaga ggatttggga gaaaatgaag
      481 aagagactgc agaggaaggt ctgaggagac acagaataga acggacaata ggagaggagg
      541 aaagagtgca gaggaaccgg gtgaggtctg aagttgaaac tatggtgtaa aaaagagagc
      601 tgatggcagg gctttaagtc tctgtgatta ttatttagga cccactcaag gccttatagg
      661 caggcctgtg tgggtgcctg atgcggggtg gaaatcatta
//
LOCUS       KCHQ01000212             201 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 23606cha ultra-conserved
            element locus uce-757, sequence.
ACCESSION   KCHQ01000212
VERSION     KCHQ01000212.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 201)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 201)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23606cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>201
                     /note="ultra-conserved element locus uce-757"
BASE COUNT           75 a           38 c           28 g           60 t
ORIGIN      
        1 ccctagcaga aattggttta attaatagga cattttacat aatgattaca gtgtaattgc
       61 accgactagc agagtgtcat taaatatatc cttgctcctt tacaacaccc tctagctaaa
      121 aataatgagt tacattggaa atcactatgc aacaggttca taaataacat ttaagcccat
      181 acaaggcaag tacttataaa t
//
LOCUS       KCHQ01000213             476 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 23707cha ultra-conserved
            element locus uce-756, sequence.
ACCESSION   KCHQ01000213
VERSION     KCHQ01000213.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23707cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-756"
BASE COUNT          121 a          109 c          112 g          134 t
ORIGIN      
        1 gctttcctca ggccccctgg gggaatgctc agtgccgtcg ccttccctgt gaagtttgct
       61 gccgtgccca tgtaagtcct gatgctgtaa gagttccctg tggctctgga agctgatatg
      121 gcagtgattg catctgaagg ccgcctgtga caggtgagac atgatgtgat gctggaatgt
      181 aataagagaa tctgccgtgt agttacagat tgtgcatttc aagctggtgc caggagggag
      241 gctctcttcc attttgacac ctgtgaagga gataaaaggg agaaatgctc agaatctcgc
      301 ctcccacttc tcctttagag ttaactgtag aaaccatcaa acgctcatgc attatgccaa
      361 gcttattccc atccactaca ttttttttgc tcaaggataa actgtcaact atacaagctg
      421 acagcaggat atgtatattc ctgaaaagaa atgacagtca tttttccaaa cctgtt
//
LOCUS       KCHQ01000214             420 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 23904cha ultra-conserved
            element locus uce-758, sequence.
ACCESSION   KCHQ01000214
VERSION     KCHQ01000214.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 420)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 420)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23904cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>420
                     /note="ultra-conserved element locus uce-758"
BASE COUNT          122 a           90 c          109 g           99 t
ORIGIN      
        1 caaacattgt gtttgagcca gcaaagacgc agcactcagc agcctcaagc agcacaagtt
       61 tagcaactgt ttttcttttt aattgttgtg gaaattaaat aagagtgttt gtgacatgag
      121 tgttgtaggt aatgagagcc tgagagcagc tgggaggcta caggcctgcg tgcgcatcat
      181 taggagctca gaggctccca ggctccacgc tagcgtaagc cgctaatgaa aagaatgtag
      241 tcacagatct catttttcag gcaattcttg tgtaaactgg agattttcca gtgtatgcac
      301 agtggaacag gggccccaca taaatcacac aggctgactg cctccagtga aagaaagagg
      361 gggtttcgag cacatgctaa ccacacagac atatgctgca ggaaatctgc agtggcacag
//
LOCUS       KCHQ01000215             354 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 23997cha ultra-conserved
            element locus uce-613, sequence.
ACCESSION   KCHQ01000215
VERSION     KCHQ01000215.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 354)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="23997cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>354
                     /note="ultra-conserved element locus uce-613"
BASE COUNT           72 a           96 c           95 g           91 t
ORIGIN      
        1 tctaacagtg aggaaatcaa tatgatgtaa attattaaga gctcaggaat gcgtctgacc
       61 cctactgtct tgcagcaggc tgggctctga aggctggcag gtggacgcga gcttggactc
      121 tccctctaac actcattagt ggctgggagc cggggctcct tgtgagtggg aaggcaggga
      181 tcacagcggg gaagtgatgg cccaggcctc tcacatcccg gctcagcctt cgctctggct
      241 ctgccagcct ctccctggaa gctcattagt aagtgcactg atgcataaga gctagtcatt
      301 agctgggctt tttttccgtc ttcatctctc tttcccccga caccatgtct gatc
//
LOCUS       KCHQ01000216             270 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 24096cha ultra-conserved
            element locus uce-614, sequence.
ACCESSION   KCHQ01000216
VERSION     KCHQ01000216.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 270)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 270)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24096cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>270
                     /note="ultra-conserved element locus uce-614"
BASE COUNT           95 a           45 c           56 g           74 t
ORIGIN      
        1 aaataacaaa gtaaataaac agtcaaaata aacagccaga gtaataaggt taactattta
       61 gtttttcctt ttgatattga tatttgcagg aagagctaca ggagagggca aaattaatga
      121 cagcagacat aatgccattg ggatacttag gagtgtgtcc aatactttaa gtaatagcgt
      181 taatggcgaa tttgaaggaa tttaattttc gacatcaaac agcagcgcct ttggaaagcc
      241 accaccctct tggctccaca tgtttggggc
//
LOCUS       KCHQ01000217             247 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 24192cha ultra-conserved
            element locus uce-615, sequence.
ACCESSION   KCHQ01000217
VERSION     KCHQ01000217.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 247)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 247)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24192cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>247
                     /note="ultra-conserved element locus uce-615"
BASE COUNT           66 a           50 c           49 g           82 t
ORIGIN      
        1 tcattgacaa acatatatat tttttgctgt tcccaactga ctttgcagcg ctgaactcca
       61 tttatgaatt atctgacata tttcctgcta tttttttgac aggagtactc agaggaaatt
      121 tcaaggcacc tttctcctga caagtagaaa tatcaatatt tgaataaatt gcagatttgg
      181 atctcctcac atggatgctc tccagcaaga gtgtgtgtgc gcgcgcgtgc agccgtatga
      241 atgtgtg
//
LOCUS       KCHQ01000218             297 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 24288cha ultra-conserved
            element locus uce-617, sequence.
ACCESSION   KCHQ01000218
VERSION     KCHQ01000218.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 297)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 297)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24288cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>297
                     /note="ultra-conserved element locus uce-617"
BASE COUNT           79 a           77 c           60 g           81 t
ORIGIN      
        1 ccacccggca aagcatttta tttacattaa gacatagggg cacaaatcta ggcctgcctc
       61 agcagcggct catgttgtgc ctgcacagat gggctttcct gctcagattc cacattcttt
      121 atcagtcccc aaaagcaaag gaaaaaaaac aaatcaccaa atgtaacaat cttccccctg
      181 tcctccttgt gattgcatgt taggcactga ggtgataagc acactggtac gtgttgttgc
      241 tgtgtgaaag acacccttta tcggctcata cctctgactt gtgcttagtc tagtcag
//
LOCUS       KCHQ01000219             222 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 24374cha ultra-conserved
            element locus uce-812, sequence.
ACCESSION   KCHQ01000219
VERSION     KCHQ01000219.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 222)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 222)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24374cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>222
                     /note="ultra-conserved element locus uce-812"
BASE COUNT           60 a           62 c           64 g           36 t
ORIGIN      
        1 gaggagacgg atgacgttcc tctgcagaac tcgagcaacg ggaccagcat cagcatcatc
       61 atcaacggcg ttgccaagga aactgcctct cacaacgccc ttgacctgaa aagggaagtg
      121 ccggtgatcg agctctccag gagggacgct ataaaagcgg tggagcagag gactgaaagc
      181 catttggtgc cgatcacgga acttcgcaga cctccaccgc tg
//
LOCUS       KCHQ01000220             467 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 24455cha ultra-conserved
            element locus uce-813, sequence.
ACCESSION   KCHQ01000220
VERSION     KCHQ01000220.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 467)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24455cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>467
                     /note="ultra-conserved element locus uce-813"
BASE COUNT          147 a           96 c          100 g          124 t
ORIGIN      
        1 ctccggttgg tgctcggaca aagtgcagaa gaggccaaag caagaaagaa gaaaatgaag
       61 ccaagcagtt caggaaaata aaaataggtg gaaagaggaa actaaacagc atccagtcct
      121 aatatgcgga gcctgtgtgc agcttgcaca catgtctgtg gctttgcgtg tctgcgtgtg
      181 tctccagagt ccaggctgtg tagatcacca ttccacctta tctaatttca ttaatgtgat
      241 cccctgtcca tcccctgacg gcttaatagc cattatttgt gggtcccttc aaataaaggc
      301 tcagcagtaa attgcagtct gtggaaatcg agatataaac gccaccctgc attactgtat
      361 aatatctttg cctttaatta actgaaagcc atgctgacat ttattggatt gcaagttact
      421 tgttaatggc aataaattgc gaaacaaaaa aaaaagaatc attgctt
//
LOCUS       KCHQ01000221             283 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 24551cha ultra-conserved
            element locus uce-810, sequence.
ACCESSION   KCHQ01000221
VERSION     KCHQ01000221.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 283)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 283)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24551cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>283
                     /note="ultra-conserved element locus uce-810"
BASE COUNT           91 a           72 c           39 g           81 t
ORIGIN      
        1 ctttaagagc ccttaaaaaa aatgaaacct attcctttgc atcttccatg ctcttatttc
       61 aatactcctc tctccttgtt ccccctccac acatcattaa acatattatt ataacatgac
      121 tgtcagcctg cgtctctctt cgctccattc ttgctctgcc aggtaatcaa tttgtcgtca
      181 ctctctgtaa ccccagtaaa gtcatcaagt gaaatgagtt acagctgcaa agagccttca
      241 agaatacggg aggaaaaaaa aaaaaaatga acgcgagaaa aat
//
LOCUS       KCHQ01000222             293 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 24642cha ultra-conserved
            element locus uce-811, sequence.
ACCESSION   KCHQ01000222
VERSION     KCHQ01000222.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 293)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 293)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24642cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>293
                     /note="ultra-conserved element locus uce-811"
BASE COUNT           93 a           61 c           85 g           54 t
ORIGIN      
        1 aagctggcag tgactgagaa aatgaggatt tgacggcaag gtgacaaaga gttcaaacaa
       61 aatgaggctt gtagattagc agcactcccc tcagtgacag gtgtcatctc ttggggcagt
      121 ctgtcactct gcctgctgcc actctttata taatatgagg agagagagag atggagagag
      181 aggaggagag gcagcacctc acaaggcacg gcctagccta ctctacctgc cagtaaccaa
      241 gattaaagcc tacagtaagt ggcagaggga gagctggacg aacaaaagac gag
//
LOCUS       KCHQ01000223             360 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 24739cha ultra-conserved
            element locus uce-816, sequence.
ACCESSION   KCHQ01000223
VERSION     KCHQ01000223.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 360)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24739cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>360
                     /note="ultra-conserved element locus uce-816"
BASE COUNT           98 a           90 c           83 g           89 t
ORIGIN      
        1 aaaaataaca gtttgttagc accattgatt tagcacttag agcgtgtcct tattaccttg
       61 taattatggt cagtgttgac ataacagcac agacaaccag gcctcccacc ctctgagaga
      121 atttatgggc cctggtttta ttacggccat ttcatgtgtc tgggtcccca gttaagcgac
      181 agacttgagt tctagccaag ggcccgtatt tcactcatcg aggtcagggt tctcaggaat
      241 ccccccgtaa agctgaatgc cgacggggac cggcgtgtac acacgggaga cgcggggaag
      301 ccctccccaa gggctcatta aaataaatag ccgattacaa gctataatcc aaataatgct
//
LOCUS       KCHQ01000224             273 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 24798cha ultra-conserved
            element locus uce-817, sequence.
ACCESSION   KCHQ01000224
VERSION     KCHQ01000224.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 273)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 273)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24798cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>273
                     /note="ultra-conserved element locus uce-817"
BASE COUNT           92 a           54 c           43 g           84 t
ORIGIN      
        1 caaattacgt acaaacggat atatccttta tataacagca gtgattttct ccactttatc
       61 ctacctgtca agctcagaac atcacaggct aattctttat taagtgaaag ggcatcgggg
      121 accagatgat ccaatttaag tacattgggc agaatagaag actaattaaa acccatattt
      181 ttacattatt aattttggaa cttcactttt aatgaatgtg aaaagacagg ccttccattt
      241 atacacacat actctttggg ctgctcaaca agg
//
LOCUS       KCHQ01000225             263 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 24879cha ultra-conserved
            element locus uce-814, sequence.
ACCESSION   KCHQ01000225
VERSION     KCHQ01000225.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 263)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 263)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="24879cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>263
                     /note="ultra-conserved element locus uce-814"
BASE COUNT           50 a           68 c           78 g           67 t
ORIGIN      
        1 cttgctgccg gcggcagtgg caggatgatg cctgaggtgc ctcctaggag gaccgtgccc
       61 tcgttactcc tcaacttgac tttgggtttc acaaagcgag ccctttgttt acgctgacag
      121 gatacgctgg ctactgacct ggaaaaagtg gccaagacgg gttgtcttgt aaggaagagg
      181 gaggctggtg atgtataggc tccttctggg acctttcatg gaactgctgt tggagacgcc
      241 ccgcaatccc tctctctgct cat
//
LOCUS       KCHQ01000226             535 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 25167cha ultra-conserved
            element locus uce-818, sequence.
ACCESSION   KCHQ01000226
VERSION     KCHQ01000226.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 535)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25167cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>535
                     /note="ultra-conserved element locus uce-818"
BASE COUNT          140 a          113 c          111 g          171 t
ORIGIN      
        1 agcactagga ttaatagacc tctcctaata tgcctcgcat tggtggtccc tgaacaccct
       61 gatcaggtaa ggcccagcga agcaaagatc atttataagt ggttcattat tttaccttca
      121 gattcctctg tctggcattg atttaataaa cactgatgta tctccttgta gaagagaagt
      181 gccatttttc atttcccaga tttgcaatct ttgttatcgc agttatctgt cgagctctgg
      241 catttcggcg gtaatacgct cccaatctca gctgtgcgcg ggaagtggcg cgggaaagtc
      301 gtgcagttct tctatggcag atattccttt taatgtttac tggaagattc tttaaaagaa
      361 aatattgcct tttatctctc tgactcggtg ccttgcgcgt ccagacacgg ctttgtaaat
      421 gaacagcttg tttaataaag ttccgccaaa gtgctctgat tatccatgaa aggattcaac
      481 aacgtgtgac atcaacagtg aggtacaata attaatgatc tatcaatgtg ttctg
//
LOCUS       KCHQ01000227             474 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 25255cha ultra-conserved
            element locus uce-819, sequence.
ACCESSION   KCHQ01000227
VERSION     KCHQ01000227.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 474)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 474)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25255cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>474
                     /note="ultra-conserved element locus uce-819"
BASE COUNT          110 a          105 c           90 g          169 t
ORIGIN      
        1 tacacaccag catctaatgg ctagtcagtg acactgaggt cttagcccct gtctgccagt
       61 cctcatttgt ttcccagccc ctcctatgtg tgtgtagcag tagcacttgc taccgggtgt
      121 cttgttactc ctcagaaggt ctattgattt aactcttgcc acaatctata acactattgt
      181 cttgccttaa gtgtctcatc tgtacaattc actggcagga gtctatacat caaaaacccc
      241 gcctgcttaa ggatattggt attctgcaac atgctgggaa ttcttttttt ttttttctgt
      301 gtgaatttca catttcttgc acactcaacc ttacattttt tttctttttt gcaaagcaaa
      361 gatgctcgca gcaaggcgta acaggctggt acgggtttat ttttactgct gttgtgttta
      421 tgaagtcaat attttatttc acaatatcat atagcagtgg tgtagagcag gagt
//
LOCUS       KCHQ01000228             457 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 25313cha ultra-conserved
            element locus uce-279, sequence.
ACCESSION   KCHQ01000228
VERSION     KCHQ01000228.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 457)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25313cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>457
                     /note="ultra-conserved element locus uce-279"
BASE COUNT          137 a           92 c           89 g          139 t
ORIGIN      
        1 tttaggcact tcataaacag acttctcttt gcaggttatc gagacagccg ctcggtgaaa
       61 acacaccctc ttttccaatg ctgatgtgca attaaaatgg ttttagaaat cctctttgac
      121 agtccagggc ttagccaaaa atgtaaatga cattaaagga gacaatgaat ttaattttgt
      181 ttaatgtccc ctttcgctga ttctcattta catcacattt ccacataaag ggctgacctt
      241 ataaatactg gcatttgttc agcttttgga ggtaatcacg gttttgcaaa aaccagatgg
      301 gagcacacaa attttctgat ttgtttctta gaaggccgag ggaaccacat atgagacgtt
      361 ctaagactgc ggtcttttgt ttctggtaaa caacttgaca acaagtcaag tgcactctgg
      421 gaaatgacct cgtaggtgtt ccacaaatga acgataa
//
LOCUS       KCHQ01000229             280 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 25387cha ultra-conserved
            element locus uce-461, sequence.
ACCESSION   KCHQ01000229
VERSION     KCHQ01000229.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 280)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 280)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25387cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>280
                     /note="ultra-conserved element locus uce-461"
BASE COUNT           87 a           31 c          108 g           54 t
ORIGIN      
        1 gggggggggg gagggggggg gtattttatt tttattttga gtgtttaatg tattaaaagg
       61 ggccggggta atgaattata atctttaatg cagaaaccga tcgatatcac caagagaata
      121 aatcagcttt tactgagagc gtcaaagccc cttaatacac taggagagag aaagggagag
      181 cggagggagg aggaggggga ggaggggagg gggtgcagca gggacaaact gttaggagag
      241 gaggaacgat cccgagtgaa gcagagagag gaggaggatg
//
LOCUS       KCHQ01000230             240 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 25469cha ultra-conserved
            element locus uce-1213, sequence.
ACCESSION   KCHQ01000230
VERSION     KCHQ01000230.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 240)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 240)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25469cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>240
                     /note="ultra-conserved element locus uce-1213"
BASE COUNT           48 a           61 c           75 g           56 t
ORIGIN      
        1 cactgacggt acctctgagt aaactgtgtg ttaacgctgt tctttccctc ttccagggca
       61 tgctacggtg ttctgaggtt catcatggag agcggcgcca agggctgcga ggttgtggtg
      121 tccggaaagc tgaggggtca gagggccaag tccatgaagt ttgtggatgg cctgatgatc
      181 cacagcggag accccgtcaa ctactacgtc gacacagcag tccgccacgt cctgttgagg
//
LOCUS       KCHQ01000231             454 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 25557cha ultra-conserved
            element locus uce-7, sequence.
ACCESSION   KCHQ01000231
VERSION     KCHQ01000231.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 454)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25557cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>454
                     /note="ultra-conserved element locus uce-7"
BASE COUNT          100 a          124 c          115 g          115 t
ORIGIN      
        1 gaaggggagt tagagagtca gccatctctt gcaaataagt ttttgagtca ctttccccag
       61 ctgaaacacg ggtcgatatt tccccccctc ccttgagaaa gagattgact tttgtttgga
      121 gtttgtgaga agtgggaatc agaagcggga caatgggact ccccacggtg agaggctgag
      181 aggagccatc tcaaatcagt cagccagagg actgactaat ccgtccattg tccctcccca
      241 gccaccggcc gcacatcaac acattcgccc cccattgtcc cccaccctca tgcagcggga
      301 tttgctctcc ccaacagcca gttttgtcca aggcagttcg agcggaagtt tctcactgac
      361 aatttgcccc aaatagattt gtcagagcgt ccaactgcac cgcaccgact ttgtgggttt
      421 ctgggtttgg gttctgggtc tgggtttttt tggg
//
LOCUS       KCHQ01000232             604 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 25611cha ultra-conserved
            element locus uce-928, sequence.
ACCESSION   KCHQ01000232
VERSION     KCHQ01000232.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 604)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25611cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>604
                     /note="ultra-conserved element locus uce-928"
BASE COUNT          168 a          138 c          148 g          150 t
ORIGIN      
        1 ttacacaaga ggagagaggg agtgggcatg tgtttgtgat atcagggaac aggagagcgg
       61 cagtgatcat gcacttcaca gtgtaattct ttggagtgaa cgtctgccat gatcatggcg
      121 tcattgtttc tctactggaa tacaattaac ggcaatcatc cagtctcagt ctttacttaa
      181 attatcgtcc tgtttctcct tttcagcctg catccatttt tagtccctgt cctagagaga
      241 caaacggggc tgaagcgccc gtcctccacc tctaacttta ccactcgcca caacacacag
      301 acaataccac tccgttccgc ctgattggat ccatttgcat tggacacctc ctctgcatat
      361 tgattgatgg gtttaatcag cgaatcaggg ggagcgctca gacatcaatc tctgtcaagc
      421 ccctaccttt ttccgagcct gcgattccct gctaggactc atcaaggaaa gcaagtttag
      481 acagaggaag aggtagggag agggaacaga ggagaatgag agaggaaaaa aagaagaaag
      541 gcatgcgagg agtggaagga caaagtatta gaaataactt caggtggatt tctctgactg
      601 gccc
//
LOCUS       KCHQ01000233             556 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 25641cha ultra-conserved
            element locus uce-882, sequence.
ACCESSION   KCHQ01000233
VERSION     KCHQ01000233.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 556)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 556)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25641cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>556
                     /note="ultra-conserved element locus uce-882"
BASE COUNT          183 a          114 c           84 g          175 t
ORIGIN      
        1 cttttcattt tacaaacaaa gcctaaatta ggaattaaat acattcgtat ttagataacg
       61 gcattagctt tacgacatca atgtgaaaaa gttggacgcc atccatatca ttcccatgct
      121 tccattgtta cgttaaattg caatattaat cctggctcaa acctaggtac tgtagctttt
      181 atgcagtaca cttgaattat gctattgaag taattgatag tgattcagtc attgaaggta
      241 ctaatcccat gattcagttc atctctctca gtgccattta cctccagatg tttagagttt
      301 ggggtaatca ataaagaggg aataaagatt ggcattcaca atactcccct tgacaagctc
      361 cagccgaatg tttgtcaagc aaattaaaca cacttagact tttcacctgc tcctacaacg
      421 acaccacata tggccgtgaa gttaaaaata agaaactctg catacattac catgcataat
      481 gcacaactcc ctccatttaa tatgcaaatt ttgtaaaata ttactgaata ccttctgttc
      541 ggaatgaata aatttg
//
LOCUS       KCHQ01000234             308 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 25719cha ultra-conserved
            element locus uce-1215, sequence.
ACCESSION   KCHQ01000234
VERSION     KCHQ01000234.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 308)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 308)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25719cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>308
                     /note="ultra-conserved element locus uce-1215"
BASE COUNT           96 a           58 c           65 g           89 t
ORIGIN      
        1 gctcttaaaa aaggtgcttt tctgacatta aaatgacttg tgtgcacagc gcatgtcgat
       61 ccgtgcagtt tgaggcatat atttatgaat aggaaccttt aattagggct tgtgtttcct
      121 ccctagtcac attgagggat ggtcctcgcc gacattcatt aatgataatc accaagagcg
      181 atggcatagc tacaggccaa gtctcagggg acccgacact tgaaaagaag cattaaatta
      241 cacagaggga ctctttaatt gcaaaaagga aaatatatag ccatcattgt taaatatgat
      301 cttttgta
//
LOCUS       KCHQ01000235             517 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 25815cha ultra-conserved
            element locus uce-466, sequence.
ACCESSION   KCHQ01000235
VERSION     KCHQ01000235.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 517)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="25815cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>517
                     /note="ultra-conserved element locus uce-466"
BASE COUNT          127 a          104 c          155 g          131 t
ORIGIN      
        1 actcggaggg gaaaaaaacg acacgcaaca atagcatcca ccaatagcac tgtcaaacaa
       61 cgccatctct ctcggatgtt aaaagcttta agagctgagg cctctgtgac atccatagcc
      121 tctggatgtc aaagatggtt gaagacttga gagcaggcct ctgttttaaa aatactatgt
      181 gtgggtgtgt gtgtgcgcac gtctcagagc agcaaaagtg acatttgagg ggcactttac
      241 agaagccggc ggttgctagg gatcttctgt atcacctaaa gagcctttgt cagtcattgg
      301 aaagctgtca cctttcaggg ggccgatacg gtagggggag ctggctgaca ggtaggaatt
      361 aatgagaggt gtatgacagc agacctcggt gctcttgtgt atgtgtgcgt gagtgtgtgt
      421 gtttgagagt gtgtccatgt gtgcgcgtgt gcgagcgagg tcctttgtct caagaggatg
      481 aaccaccttc tttgtcgtcc tgatgcggga ggaacag
//
LOCUS       KCHQ01000236             416 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 26001cha ultra-conserved
            element locus uce-105, sequence.
ACCESSION   KCHQ01000236
VERSION     KCHQ01000236.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 416)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26001cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>416
                     /note="ultra-conserved element locus uce-105"
BASE COUNT          152 a           68 c           80 g          116 t
ORIGIN      
        1 gctctttatt ccacgcagca gtcaatcctt cattttgaga ggcctgagca agagaattac
       61 atgattcatc aagcaggcta ctccaataaa ttggatagct gatacaacca tcaaaattgc
      121 cattaaatga attgtaagtg tgaaatagaa tggcgatatg tctgacatag cacagtaata
      181 aatgtagtgc aggggagggg tgaatttcca ggagattata gtgaaatact ttgcactttt
      241 aagtggtcaa ataatatgtt tacacttaac aatatgctac aaaaacagag taattaccaa
      301 ggaacgggta ataaacgact aaatgttaat tactgaaaat ctaattaata gataatgaca
      361 cttgaaaact gtgcacagac tgctagacac tgttcatgaa ccagtgtctc atgatt
//
LOCUS       KCHQ01000237             876 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 26103cha ultra-conserved
            element locus uce-106, sequence.
ACCESSION   KCHQ01000237
VERSION     KCHQ01000237.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 876)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26103cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>876
                     /note="ultra-conserved element locus uce-106"
BASE COUNT          195 a          249 c          193 g          239 t
ORIGIN      
        1 cacgtgctga gcctgctctg ttcagggagg tgtgagagga gcatgagagg aattgggagt
       61 gcagttgcat cgtggcttca ctctgttgta acccacagtg gagccacctc atgcccccaa
      121 cgggcttcca cttcaagagc cctgcctttg ttcaaaaatg tatttgttct cttattcttt
      181 ttgggaactg tgtaaaacaa aaaaggacga atggcgaaaa gaaccattca ttctccctcc
      241 acaccctcga accccacccc actaccacct ctctccctct ctctcccact ctgtctctac
      301 ctctctcgcc ctctctggtt gtgcgtattt tgccgcagat gctaatgatc tccccccctc
      361 tgtattctga cgcaaggtct gtctacactt ttccctttca tccacataca aatgtgctct
      421 tattgcctct tcgccctcgg gccttttaag atgccttttt gaaatatgcc gtttgataag
      481 cacatcattg gccaagtccc tgcagtgatt agagctctct ttaatgtgag caagttacag
      541 agtgaatgag gggctccagg gccagcagct atccgttctc ctctgccctc cccccttgac
      601 atctcccggg ccgctgggga gggaccaatg tcggtgagga tgacccagag tccggcacgg
      661 aacgtaggca ccgttggcca tgctccatcc ttcatctaca catagagatt aagcacggga
      721 ggaaagacac tggagaaaca ccttcataca gacacggtgc tgtaatgctg gaaggctaga
      781 ttcctgtact ttatcacagg gatatgacag gaggacttct ctctaatgtc ttttaaatat
      841 gctccattga tctcatgttc agagccttgc tgggat
//
LOCUS       KCHQ01000238             340 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 26202cha ultra-conserved
            element locus uce-107, sequence.
ACCESSION   KCHQ01000238
VERSION     KCHQ01000238.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 340)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26202cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>340
                     /note="ultra-conserved element locus uce-107"
BASE COUNT           94 a           74 c           60 g          112 t
ORIGIN      
        1 ccttcaacac cctcgctctc cttaagccct ggcagagcca ctgctgtaaa gtaactaggc
       61 tatccaattt cccttcatga aataagagct ttttaatgta tttttttaga gaagcagaaa
      121 gaagttagca cacaatgatg aattagattt caatttattt gacttcattc ccagcttgct
      181 gcattagagc ctgcaaacac ccatctccag cagtccgtcc gcctcattct tattaggttt
      241 cagaaaacaa ggcgagggaa ttgcattagt gtatcttaag ttaaaagctc tttgctcttt
      301 gaccaagtgt ttcattgtta ttgggttaat cagatttttg
//
LOCUS       KCHQ01000239            1056 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 26300cha ultra-conserved
            element locus uce-101, sequence.
ACCESSION   KCHQ01000239
VERSION     KCHQ01000239.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26300cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>1056
                     /note="ultra-conserved element locus uce-101"
BASE COUNT          269 a          237 c          246 g          304 t
ORIGIN      
        1 cctgctctga catttcagcc cccagcatgc cagtcttgct atgtgtgata tttctcctgg
       61 cgttggggta atggcaaaca gtggcccaga ctcccagggg atgcggccgt ggtgacggca
      121 gagcaacaac acggtcactt cccacaatgc cacaatgcta cagtactaga cactcctcag
      181 actcccctca gattccttct atggcttcct ttcctcccct catctctcta tcctcaactc
      241 tccagcactg tgctgcacat tagtcctgca tttccacatt ccccaagtcg tgcgtctgcg
      301 tcattatcta agagagatta ggcaagatca aaggtagctt ccgttatttt accaagacca
      361 tctgcttagg atatcattag caactgtacc tcaccctgag agtttatata ttcagtattt
      421 tcacacgttt taacaattag gcgactagtg aagtgctggg atgatatatt attatattgc
      481 tctgagtgta tttgtagagt catggttgaa atgcttttaa gtttgccagc gcagatgatg
      541 gcaaggcatt gctcattaat ttctgcacaa catgtattaa taagtatgaa cgtgtagcaa
      601 gatgaacttt aatttcccac ttcattaagc ccaatgttat taatcttggg gcacacacta
      661 cggctaagct tgttttcaaa gcaatcatgt tggtcatgac acatgcacaa aacctaataa
      721 acataattac taaaacaatt cggggaaggt cttttcctgc gacatcagag gggatcattt
      781 gtatgaaagg gcaacgagga tgtatgtttg cgtgtgtgtt tgtgcagacg tgagacggcg
      841 gtcctgcaca gtgcttgcat gatgcgtgtg tgaagatgtg ctctgtgtga gtgtttgaac
      901 tgaaaggtgt aaattggcct gtcaaaatgc atatatttgt aatgattagt ccctcaccaa
      961 accggacaga ggcctgagca gcggtatctg accagtagtc cgtagggaaa ggatgagggg
     1021 gtgagggggg ctcaccttgc agtccgttgc cgttgg
//
LOCUS       KCHQ01000240             384 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 26451cha ultra-conserved
            element locus uce-108, sequence.
ACCESSION   KCHQ01000240
VERSION     KCHQ01000240.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26451cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>384
                     /note="ultra-conserved element locus uce-108"
BASE COUNT          139 a           77 c           66 g          102 t
ORIGIN      
        1 atccaaacac accccaccaa tttttaattt cttccattag aattaattat gaggccgaag
       61 gcaatttgtg taccctgtgt ttaagactgc ctactggatt aattaaaaac tggatgctgg
      121 aaaattaatg tgtgaattgt tatgcctttc tataatgagc catcccatgc tattacatag
      181 gagtgtactg tacgatcacc ttcaggcctg cgaacacaca aggttcatta aagagcacaa
      241 acctagtcac aagtcaactt aaggaatgcc gacctaagca cattatcaat agagcacaca
      301 ctagcagcca gatattcaaa tttccaacca agatacaaaa aaagtaaaga tgtttaactt
      361 gatgggttgg tagaaaaaaa aaag
//
LOCUS       KCHQ01000241             229 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 26540cha ultra-conserved
            element locus uce-109, sequence.
ACCESSION   KCHQ01000241
VERSION     KCHQ01000241.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 229)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 229)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26540cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>229
                     /note="ultra-conserved element locus uce-109"
BASE COUNT           63 a           36 c           96 g           34 t
ORIGIN      
        1 atggcagcgg cggctggcta aagggtcagg gtaattgtgc catcagaggc ctgattgttt
       61 tcaatcagac gggcggccga gtgacagctg ggggattggg gccctgatgg agccgcggtg
      121 ggcctaatca gagaagagaa ggggagaaag acagagaggg agagagatcg gagggggaga
      181 gcaggagggg ggaggctgat tggtgcaaat gaacagtcaa aacagtaag
//
LOCUS       KCHQ01000242             203 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 26638cha ultra-conserved
            element locus uce-34, sequence.
ACCESSION   KCHQ01000242
VERSION     KCHQ01000242.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 203)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 203)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26638cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>203
                     /note="ultra-conserved element locus uce-34"
BASE COUNT           53 a           38 c           45 g           67 t
ORIGIN      
        1 tgcaaagcag attacacaca ttatggaatt tgtcatgttc agttggagct gtcatagcta
       61 gaacagtgtg cgctaatgtg tgtaatctgc tttgcaacac atcaattatg atggatattg
      121 ctccgctgcc atgcttccag ggtttttata caagcctgca ggggaatcag tcttttcttg
      181 ttaggcaacc tgtttagtaa ata
//
LOCUS       KCHQ01000243             216 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 26730cha ultra-conserved
            element locus uce-489, sequence.
ACCESSION   KCHQ01000243
VERSION     KCHQ01000243.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 216)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 216)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26730cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>216
                     /note="ultra-conserved element locus uce-489"
BASE COUNT           49 a           51 c           50 g           66 t
ORIGIN      
        1 ctaacttccc tcttgcctcc ccaatgccca aggggtttta caggaatgga tttgtctatt
       61 agctcgtaaa gaacattgct cagtgccata tcgatcatct gagctgtaac gtttagggtc
      121 tttaagttgt agagttgatc tagtggtaca caggctcccc tggctatttt accagagtga
      181 gagatgatca acttaaccct ggtgctgcgc ttggcc
//
LOCUS       KCHQ01000244             300 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 26823cha ultra-conserved
            element locus uce-37, sequence.
ACCESSION   KCHQ01000244
VERSION     KCHQ01000244.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 300)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26823cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>300
                     /note="ultra-conserved element locus uce-37"
BASE COUNT          119 a           57 c           74 g           50 t
ORIGIN      
        1 ctgtcttgag aggggcagcc agccaatggg gggagcttcc tgaggtcatg tggttggagg
       61 aggcagagtt cagaggttct ttatgtgact taccagcatg gactaccctt taatcaaaga
      121 gtagagagaa aggacaaagt taaaccaagc tccctgggca ccgcaaatca aaaagacttt
      181 acagcaaagc catgtaaggg cagacaagag agtgagacac gcaacaggat taggcaataa
      241 aacaaatttc tccatcgggg gaaaaaaaac aaaaaaaaca aaaaacaaaa caaaacaaaa
//
LOCUS       KCHQ01000245             777 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 26865cha ultra-conserved
            element locus uce-1236, sequence.
ACCESSION   KCHQ01000245
VERSION     KCHQ01000245.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26865cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-1236"
BASE COUNT          188 a          183 c          176 g          230 t
ORIGIN      
        1 ctttgtatag cagtttgcat tcatctcgtg cacctccttc ctttgtgttg cattatataa
       61 gagtcggttt tctggatttg tccttcttca ggacctcctc cactctgcgc atatacagtg
      121 tctcaaccac cttcccttgt gttcagcacc atttcacccc accttccccc aacctttacc
      181 gccccgtgcc tgtccctgga caggtttcag catataaatt tgaaaatgat ttgtcctgcc
      241 ctcttaataa tagatgagag agcagagtca gggtcccttc aataaactcc atcctcgctt
      301 taattagtga acaaaaaacg ccaggcctgc tgaggactct ggctttggct ctgtgttagt
      361 aattaaaact gaaaccacca aaaggagagg agaggagaag gctctatttt taacgggcag
      421 gctgtttggt gccgagtgcc cgtataaggt tctgcaataa agagtgataa tgaaggtgtg
      481 agacctctgg gggctgactg ggcgctcgct acaatggctg ctctcacacc agactgaaat
      541 acagggagca attagaggag gcagtgcata gactggccac tagagattag ttaacacctc
      601 aggagctccg tttcaggaca ggcacatgct tgttttcttt ctctctcttt tgctttcaag
      661 ataacgcact aaggtcttaa tgatgagatt tattttattc agttgtcatc gcagacagat
      721 aacgtttcac ctggtctttg ttgagggttg tgtcggtata gaaggggtca ttgatcc
//
LOCUS       KCHQ01000246             303 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 26930cha ultra-conserved
            element locus uce-131, sequence.
ACCESSION   KCHQ01000246
VERSION     KCHQ01000246.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 303)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 303)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="26930cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>303
                     /note="ultra-conserved element locus uce-131"
BASE COUNT           76 a           53 c           76 g           98 t
ORIGIN      
        1 gcaaaacact ttcatctgtc atttcgtgat agcccgtctc tctttgtcag cataaatacg
       61 ggagccccta tttgaatatg gttacacatc cctctattta ttaaagcttg gattaacatg
      121 acaggaagtt ttgtctgggg gctctttaag atggctcaga gaggcaatct ggtgacagta
      181 ataggatcca gctaatatac ttgactgatg ctcctttccc agtgttataa agcagaacaa
      241 tgggagaggg gttcggggag tgaatacatt gtgttttgta actgtgtgtg tgtgtgtgtg
      301 tgt
//
LOCUS       KCHQ01000247             233 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 27207cha ultra-conserved
            element locus uce-1232, sequence.
ACCESSION   KCHQ01000247
VERSION     KCHQ01000247.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 233)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 233)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27207cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>233
                     /note="ultra-conserved element locus uce-1232"
BASE COUNT           87 a           37 c           44 g           65 t
ORIGIN      
        1 taactacaca catgtgtact ataatgagct gtagacatta tgcctaatta tgtattagac
       61 tgtgttagag ggcctaacaa aagcttttga aagggacaat tacgtttgtt gcttagttac
      121 atcgttaaaa atataccaaa tcagtgcaga ttatagtggg cgagaatgca catgtacacc
      181 acgagcattg ttgccaaaat gcacaaaatt caattcatta ggaaaaaaga aaa
//
LOCUS       KCHQ01000248             416 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 27296cha ultra-conserved
            element locus uce-1233, sequence.
ACCESSION   KCHQ01000248
VERSION     KCHQ01000248.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 416)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27296cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>416
                     /note="ultra-conserved element locus uce-1233"
BASE COUNT          115 a           90 c           80 g          131 t
ORIGIN      
        1 ctgttctttt gtgacgccct gccttctgat catttacatc aagttgacat tcggagagtt
       61 tactctgggg tctgtaattg tattctttcg ccagttctgc attgccaacc gtgaaaatgg
      121 aatcttatca accctgacca atttttaatg tacaaaatga attggcaggg gttcaaaaaa
      181 gggggagcta caattcaaat caggtgaatg atacatggca tttttttcat cgcaacctca
      241 cactacctta cccccccccc accaccacca ctgctttcaa ctatcatatt acaccggatt
      301 tatttttctt tcaaagcaag ggtgagcatg ggagggggaa actcaaagca aaaatgatgt
      361 gtgtatgagt ttctgtgtgt tcatgaatgc ttgtatgtat ttgaatatac atacca
//
LOCUS       KCHQ01000249             573 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 27390cha ultra-conserved
            element locus uce-1230, sequence.
ACCESSION   KCHQ01000249
VERSION     KCHQ01000249.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 573)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27390cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>573
                     /note="ultra-conserved element locus uce-1230"
BASE COUNT          139 a          168 c           94 g          172 t
ORIGIN      
        1 tattgtcctc tctcttcact cccctctccc tctcatcccc ccacacccct cctcatctcc
       61 cccatcattc ggacagctgg aaacagaatt catccgattc gttctgctgc ttttctctct
      121 cccaactgcc ccattccccc caccattccc cagtccccct cactgtcgta ataggatctg
      181 caggaatcat tcaaaggcta gatataattt actgcttgcc gtgcacaata ccccctccca
      241 ctctcacccc ctttctcaat tgcacaaggt gccctgcgga tgaactaatc atacttgaaa
      301 tattatttct gcttcttatt cctccatttt atgaacagct cccttttatg gtgcaatgga
      361 tttaacccct gcctggtcac actcacacca gtctgtgcag gaagaaagag ggtgggtggg
      421 tggtgtgggc ggagagagaa agacagaaaa accttttata tttcttttgt ttatgtttct
      481 gccttcttgt ttgttttgat aaattcatat tttacccaaa ctttgatttc cccaggtgac
      541 gactcacaaa aagaagaaga agaagaagaa gaa
//
LOCUS       KCHQ01000250             559 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 27494cha ultra-conserved
            element locus uce-535, sequence.
ACCESSION   KCHQ01000250
VERSION     KCHQ01000250.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27494cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-535"
BASE COUNT          126 a          130 c           77 g          226 t
ORIGIN      
        1 tattccacct accctgatgt ccccctgttg tcattgtctt ctcttcctct tcttgttttt
       61 ttttctatgg acacagaggt aacggtggta tgcctttcaa tgcattgaat acaaaggtta
      121 aacaatgata atcaatgttt ttcagtattt tctacatgtt tattaacagc tgctaatttt
      181 ctagaggaat caaatcccga tgataaggct aaagctaaca atcatttcat atttatgtct
      241 ctcttactgt tgcttttctc tctccttcga tctctccttc tgtcccgtgt gctgtcctac
      301 ctgactgttg tgttgtcact tttaatttaa cagttcaatg gtttttcaat ttagccttta
      361 aaagctgcgc tgtcacttgt gacgaatgtt aattgcatga tgtttgttgt tgttactttt
      421 cttctcaatg acaagtgtcc ccatcccgca cacttcagtt tctaaactac gtaacccttc
      481 atgccacctt ttccaagatt taacactgtc tttaccttat atgagccttt cttatctctc
      541 catattcctt aaattctta
//
LOCUS       KCHQ01000251             349 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 27677cha ultra-conserved
            element locus uce-537, sequence.
ACCESSION   KCHQ01000251
VERSION     KCHQ01000251.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 349)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 349)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27677cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>349
                     /note="ultra-conserved element locus uce-537"
BASE COUNT           97 a           66 c           69 g          117 t
ORIGIN      
        1 ctagtaaaac acagtataac tgccatcaca cttgactgag cttatagcca gctagtccca
       61 tggcctctag aagatagagc agttaatgtt cccttttatt ttagaggata tgtcacttgt
      121 atcgcagatt tataccatga tacagcaatt ttgtccaaac agatggataa tggtgtcacc
      181 agcaaaaagc cctgttttta ttgagtttag agcatattgt ttagataggg actgtgttga
      241 acagctctgc cagcgctttc tctctttatc tctctaatct tgccagtatt agatttgatc
      301 atttttgttt gaaggaggaa aatgtggctg taatggcttc ctaatagca
//
LOCUS       KCHQ01000252             582 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 27728cha ultra-conserved
            element locus uce-531, sequence.
ACCESSION   KCHQ01000252
VERSION     KCHQ01000252.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 582)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27728cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>582
                     /note="ultra-conserved element locus uce-531"
BASE COUNT          160 a          140 c          137 g          145 t
ORIGIN      
        1 tttcaaaatc ttctcccttt ccggattcaa gggtcattga gaatgccaat cagaggaaca
       61 ggccagtcag aaagccagcg gcgtgaacag gacaggaacc agctgatgaa attcatccat
      121 acttctcact tatgatgaca tgattgattt tccctcagag tgctcaaatg taggattgtc
      181 ttcctacccc catctcctcc tccatcccgc ctcaatctgc ccacccaccc gccaagccag
      241 cagctaatgg ataaagcctc tgtctgtctc gggcatggcg gagagttgac gagtggaaga
      301 acaactgcaa cgaattaagg gtgaaatctg agagtgcaat tttccgtctg tcaatctccc
      361 ttcaagagaa caagttgacc accaatcagc ggagtcgatt cggggctggc ggttgatggg
      421 agcattctga gtgacagcgt catgtcacta cattaacaca gcaatgaaag acatgaaaag
      481 gaattttttg aagggcctgg ccagttattc gatttctgga tgtgatttgg ggggttggga
      541 ccatactttt ctgccttaac aaatgaacaa actgacaggt ta
//
LOCUS       KCHQ01000253             445 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 27796cha ultra-conserved
            element locus uce-530, sequence.
ACCESSION   KCHQ01000253
VERSION     KCHQ01000253.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="27796cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-530"
BASE COUNT          138 a           89 c           80 g          138 t
ORIGIN      
        1 caaggtcatt tattttatgt tacagtttgg taatagatgc cacattaaac tgaaggcgag
       61 taagagtttc aactttgaaa acacacatta ccagagagag actaggaata ttgtttttgc
      121 ggctggagta catcctttta aatgatatac ataatgagtt tataatatgc atctgggcta
      181 cctcctctct actttgatgt cttccaaatg gcccgggtgt catcagcaaa acatgtaggc
      241 actttcccgc ctcattgact cccaaatgta ttttaaatat cattcctggt aacgcaatta
      301 tttaaaacgc tgaactaaac acttactaat ggggaaaaag acagcgactt cgataaattc
      361 atttctcaaa tggtgggcat tcatgtttct ttttttcccc tctctctgtg aagcggaggc
      421 aactctgatg gcaacaaaaa aaaac
//
LOCUS       KCHQ01000254             607 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 28071cha ultra-conserved
            element locus uce-361, sequence.
ACCESSION   KCHQ01000254
VERSION     KCHQ01000254.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28071cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>607
                     /note="ultra-conserved element locus uce-361"
BASE COUNT          190 a          127 c          120 g          170 t
ORIGIN      
        1 ctccaccctc cccccctctc caacactctg gaatttttat gagataggac aaaaatgggc
       61 acttccctta ttaacatctc acagtggaaa tcaaatatgc aaggaaagta gtgtatctac
      121 taattagtgc tgaattcata attactgtgc tcattgatgg agatacattt gaatacgttc
      181 atttcctcag ggagagaggc aggctgtccg ggatagactg ggagaaaaaa aaaaaaatcc
      241 ccttcagccc ccctcccttt tcttttggaa attagggatc cgtggcacat ggcgatacta
      301 ccagactaag atccgaagtg cccgcaattt tcttcagata taattaatca agtgaagcat
      361 gtaacctaat gaatgtgttt gatatccgct cctattcaaa tatgggcttt atcgcgatgt
      421 gtgccggaat tgcttagagc tatgcataga cagtgacatt gcttggaaat gttcttcaac
      481 agtttctctt tgcgtgtaaa caatatccat gcttgtcaag gcatgaaaaa aaaaaacaga
      541 cagagagaca cattttaatt gcagtaaatt aataacaatt aagccgcagg atgccgggta
      601 tcttgac
//
LOCUS       KCHQ01000255             257 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 28163cha ultra-conserved
            element locus uce-362, sequence.
ACCESSION   KCHQ01000255
VERSION     KCHQ01000255.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 257)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 257)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28163cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>257
                     /note="ultra-conserved element locus uce-362"
BASE COUNT           97 a           43 c           58 g           59 t
ORIGIN      
        1 ctttctttgc ccctgagtta aagatgcctg tctgcagcat gcatttgaaa tgaagggcag
       61 aaaaaaaaaa aaaaaaaaat cagatgagaa agatttccaa aagcactttg atcagaggca
      121 tcaacagtca cgcacaaact tgttaagcag tatgtaaatt tgggctgata ctgaataaag
      181 ttgccagaat ggcatgaatc cattgtgctg cgatgatcaa aataaaagag ggcttcatac
      241 gctggagggc aagaaag
//
LOCUS       KCHQ01000256             301 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 28263cha ultra-conserved
            element locus uce-363, sequence.
ACCESSION   KCHQ01000256
VERSION     KCHQ01000256.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 301)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 301)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28263cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>301
                     /note="ultra-conserved element locus uce-363"
BASE COUNT           83 a           68 c           81 g           69 t
ORIGIN      
        1 cccgactcac aagcccaatc tcgtaggact tgttagcgta tcacgtgcca gattcttaat
       61 gaagtggaca cacgaggggg ctcgtgtgcg catgcgcttg gtgtaaaatg tagttggaaa
      121 tgaggtgtcc gtcttggagt agtcgacttt taaaaagcat cggcagcccc tgatatgacg
      181 acttcgctgg ttctgcatcc acgctgggcg gacaccttga tgtacgttta tgaaaaaagc
      241 ccgaatgaaa acaaccagaa taaaagccaa acaatggagg gactgagcgg taattgccct
      301 g
//
LOCUS       KCHQ01000257             589 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 28359cha ultra-conserved
            element locus uce-364, sequence.
ACCESSION   KCHQ01000257
VERSION     KCHQ01000257.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28359cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-364"
BASE COUNT          142 a          122 c          180 g          145 t
ORIGIN      
        1 gcttatttag tctgggatga tgtgtgctgt ctccggctcc agaggctgcc cctcttcctg
       61 tttacctggg agtcctttgg ggtgaggttg agctgaaaag cccagtcgga gccagtcaaa
      121 gggagcgtgg cgcagtcttg accctggcgc tccactcatt gtgtagtgca gcggtgtaat
      181 gaggccctgt gtggatattg atatgacaga acaaaaggcc aaggtgcagt aaggacagca
      241 atccacacgt ttcacaccat ttgtttttca caccgtatcc atcacattaa tgggtcacct
      301 ttctgtgaca gctcatgatt acctgcttac ccatggagag aaaagggggt gagggagaga
      361 gagagagaga gctctgcaag tgcagagaga gagagagata ggcaagaaga tagggagcga
      421 gggtgctcca gtgctgaggg taaagggtga gttggggttg gaaggaggct cggggagtgg
      481 ggggatggga acccagtggc atttttttat tctctctctc tctctctcaa tcagtattcc
      541 gtccatctgc aaggttgaga aatttcagca ccgtaagatt taaacccat
//
LOCUS       KCHQ01000258             312 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 28454cha ultra-conserved
            element locus uce-784, sequence.
ACCESSION   KCHQ01000258
VERSION     KCHQ01000258.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 312)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 312)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28454cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>312
                     /note="ultra-conserved element locus uce-784"
BASE COUNT           85 a           81 c           48 g           98 t
ORIGIN      
        1 acatgcccat atttcatata ccagtctctc ctatgtttca aggtgttaaa agctcaatgt
       61 atatttcctc tatatttaag cggcaggaca acggagcagc acatagcatc tcactagcag
      121 ccattgacct tggcctagcc agccttcatt agcttttaga cacttatcac tcataactgg
      181 gtttgtcctc tccgcaacgt ttcctccttc acttcactta ggctggaaaa taatggctga
      241 aatccattta tctgccattt ccaacaagtg cgtgacatta acaaattatc tacttttcac
      301 taagtatggc ca
//
LOCUS       KCHQ01000259             281 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 28625cha ultra-conserved
            element locus uce-367, sequence.
ACCESSION   KCHQ01000259
VERSION     KCHQ01000259.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 281)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 281)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28625cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>281
                     /note="ultra-conserved element locus uce-367"
BASE COUNT           81 a           77 c           59 g           64 t
ORIGIN      
        1 tcaccacaaa tccaggacga cagaaacagg ggtagccata gcctggatca ttctgaatgc
       61 atatcccctg gttgcagggc tgtggaaggc actcattaat gtcatcctca cagtgaaggc
      121 ctgtccaacc tgccaggaac aaaagcccac agagtgccgt ggtgagccca ggctctccca
      181 cttccaccct ctgaagtgaa tatcaatcag attctcctac attgatttgc ttctttttgg
      241 gttcacacac atacaaagac aagaaaaggc tttcactaaa g
//
LOCUS       KCHQ01000260             366 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 28725cha ultra-conserved
            element locus uce-368, sequence.
ACCESSION   KCHQ01000260
VERSION     KCHQ01000260.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 366)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28725cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>366
                     /note="ultra-conserved element locus uce-368"
BASE COUNT           97 a           93 c           62 g          114 t
ORIGIN      
        1 tccccagaat ggcaccttca aaagtggatc ccctgtctac ccgttcccca ggccccagat
       61 aagaagctca tccgtcatcc actggggccg cattaaattt taactctggt taccgagtgt
      121 ggccattcaa acttttatct caaaccttct ttatcttctt ttcattaagt tctcaagcac
      181 taatagccct gcgagtctcc gccggggtaa ggatgatgtt ctgaataatg aaagctcatt
      241 atttctccac agaatgcttg ttaattcaaa tgatgatatt aaaactatag tagccctcag
      301 cagtcgggtg atttctagca tactttatca tgtatcaata tatactctgt ttgtcaaaac
      361 tgcccc
//
LOCUS       KCHQ01000261             406 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 28795cha ultra-conserved
            element locus uce-369, sequence.
ACCESSION   KCHQ01000261
VERSION     KCHQ01000261.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28795cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-369"
BASE COUNT           99 a          110 c           67 g          130 t
ORIGIN      
        1 ctgcttttat aaacttgacc ccaaaattat gcataatgat ttttttttgt attgattacc
       61 tgtgtttttg ttctccgcag gcttccactt acccatcttc tttgtgagga ttctctacct
      121 cctcgtttac atctcccttc cccttctcct ctccccaaat ctacaggcaa cgggacgctc
      181 ttgtacatta aataagaact gtcaccctgg gcaacttgca gcaatgaagc atttattctg
      241 cctcacattt cctggcactt agaattattt ccttcatgcc tgataaccaa attacaatat
      301 ggcaggtctc cccggagcca caggattgtt agtgccagct cacaacatac tttcaactga
      361 tgtggcattt catgtacagc tgccaatcaa agccggcaga agggag
//
LOCUS       KCHQ01000262             234 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 28828cha ultra-conserved
            element locus uce-785, sequence.
ACCESSION   KCHQ01000262
VERSION     KCHQ01000262.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 234)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 234)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28828cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>234
                     /note="ultra-conserved element locus uce-785"
BASE COUNT           70 a           53 c           51 g           60 t
ORIGIN      
        1 ctcaccagga ctcgcccctg tgatgtggag aggaattagg gaaatgaacg ttttcagaat
       61 atcgaataat cagagaatca tcagcacccc gtcagccttc aaaagtatgg atccctcaag
      121 actcaagaga cactttgact gagagtcaaa gtcttccctc ccattagaca caaaggataa
      181 tgaggtagct gcatttccac tattgtcttt ttattgtcac aggcgtgtat gagg
//
LOCUS       KCHQ01000263             253 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 28888cha ultra-conserved
            element locus uce-243, sequence.
ACCESSION   KCHQ01000263
VERSION     KCHQ01000263.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 253)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 253)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28888cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>253
                     /note="ultra-conserved element locus uce-243"
BASE COUNT           57 a           63 c           72 g           61 t
ORIGIN      
        1 caataggaat ccacatcagt gccagccgct gttatttaca agctacacac acacagcact
       61 atgtgtatac caacctgtgt ctgaccatgg gtctgctgct ggtgtgtgag ttagtgtgtg
      121 tgttcatgca gacctggaga gtagggagtt aatgcaggca gggctgtggc agtcctcctg
      181 cccctcagcc agattaatca tgcaggagag acacagcagg cccccgttca ttctgcctgg
      241 gggtgaagct gtg
//
LOCUS       KCHQ01000264             340 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 28978cha ultra-conserved
            element locus uce-974, sequence.
ACCESSION   KCHQ01000264
VERSION     KCHQ01000264.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 340)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 340)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="28978cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>340
                     /note="ultra-conserved element locus uce-974"
BASE COUNT          102 a           79 c           79 g           80 t
ORIGIN      
        1 ttaacacaca aacacatgca gccttttccc tctccctctc ctcaggtcaa gggcacaaac
       61 tgtgagttgg gaattggaaa gtcaataaag cagaagtaat gttataatga ccctgagctg
      121 aagatgtcct gtcgaccccc atcacattgg aggaagtgga caatcaaaca aaatggtcac
      181 tctgcttgat ctctctgaaa gccatcctta aacaaggcca caagaactac tgactccctg
      241 ttactcccag ttcctctgaa gtcagcatgt ttgtcagagg gagcaacggt gtttggtttg
      301 tggaagcgga gggcaagaga tgttacagac ggataaaagg
//
LOCUS       KCHQ01000265             380 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 29076cha ultra-conserved
            element locus uce-232, sequence.
ACCESSION   KCHQ01000265
VERSION     KCHQ01000265.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 380)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29076cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>380
                     /note="ultra-conserved element locus uce-232"
BASE COUNT           96 a           88 c           80 g          116 t
ORIGIN      
        1 ctgatgagag cacaacccct ccttcatttt ggcggcatga agtcctctgt taatattcct
       61 tcctccttcc ttctttttcc tccctcctgt gagattgctg ttgtgtctta tggcttttta
      121 ttcctacgtg atggtagatg ggttcatgta ggagtagaag ccactaaaca cgcggtgagt
      181 gctcaacgcg ctggccaaca cacacagcga gcttcccgtg gatatgacag ctgccatgtt
      241 cacatcagtg tcctgcccat tatcaggaat gtgcacacag taaaaataga acaggctaat
      301 cactgcagag agtgggtaat ctttttagac cagatctgta atgtgaaaaa cctttttaaa
      361 tgacttaatt aaatggttat
//
LOCUS       KCHQ01000266             278 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 29169cha ultra-conserved
            element locus uce-1116, sequence.
ACCESSION   KCHQ01000266
VERSION     KCHQ01000266.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 278)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 278)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29169cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>278
                     /note="ultra-conserved element locus uce-1116"
BASE COUNT           93 a           69 c           49 g           67 t
ORIGIN      
        1 cgcccataat aggatctata agacgaaaat cccaacagtc atttcagtaa cgcagacgta
       61 acaatactgc agaattcaga aacacgtgca cgcacgtaca catatacact ctctcacacg
      121 cacacacaca cacagacaga cacacaacat cctttgcgtc tgaagctaaa tagttgattg
      181 atggtctaag ctgtgaagaa atgctctcct ttatgtctct aaaggtttgt aattgctgca
      241 gtgaaaggat gctcactcgc ctggaatatt gatcctaa
//
LOCUS       KCHQ01000267             463 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 29264cha ultra-conserved
            element locus uce-977, sequence.
ACCESSION   KCHQ01000267
VERSION     KCHQ01000267.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29264cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>463
                     /note="ultra-conserved element locus uce-977"
BASE COUNT          103 a          101 c          116 g          143 t
ORIGIN      
        1 ctgtgagcta gatgccatta aagtttcgtt ttagaaggga taaacatttt atgtctgctg
       61 ttttgttctg cacctttagg gaagctacat ctgccacatt tatattacct tcatcacttt
      121 gtaaagaggg agaataaatg gtctcctctc aggcattgac atttttctca cactgtgaaa
      181 ctatataccc tggtcagtct gaatatgatg aacagtggct gtcaagcaga aaagcaggca
      241 gcatgcatgc gtttgaggac ttgcatgctt gtgtgtgttg cgcctgtctg tcggcgtgtt
      301 tgtgtcctcg tctgtgcgtg tatctccgtg tgtctgtgtg agtttgagtt cagacagcag
      361 tagctctggt aatccatcca ggctcccagg gcagccagct cctacttcct gatgcatgag
      421 aagctgctgg agtggagtgg cagcaacaac tgctcagccc tat
//
LOCUS       KCHQ01000268             459 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 29314cha ultra-conserved
            element locus uce-233, sequence.
ACCESSION   KCHQ01000268
VERSION     KCHQ01000268.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 459)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29314cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>459
                     /note="ultra-conserved element locus uce-233"
BASE COUNT          103 a          118 c          107 g          131 t
ORIGIN      
        1 cccagtatag gggcaaaggg gaggggctct gcctcctgtt aaggccacaa aaagaaaagc
       61 agaccttttc taagcactga agcatccatt aaggcaacca tgcatagaca acctcccatt
      121 tgattcaacc aatttttatg tcagggcttt ttttaatgta tgttattttt tactaaatca
      181 agttaaaatc tacttcacaa tgctgtcgtt ctggcgggtt ttgagtgtaa tcacgtgtgc
      241 cgggccatgc aaaggcatat gacctgggag gttgagagcg tgtggtggtt ctgcagtgga
      301 ggggtccccc tccccttccc cctcctgcct gtggtttggg aaggctgcct gtgttccccc
      361 tggccggctg acagaactcc ccttggtcaa actgtacctt gtcttcttat tccacctgcc
      421 aatagaatcg ctttcagtca acgatccccc ggatattct
//
LOCUS       KCHQ01000269             297 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 29382cha ultra-conserved
            element locus uce-1308, sequence.
ACCESSION   KCHQ01000269
VERSION     KCHQ01000269.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 297)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 297)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29382cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>297
                     /note="ultra-conserved element locus uce-1308"
BASE COUNT          116 a           50 c           55 g           76 t
ORIGIN      
        1 aaaattaaat cagaatcttg caaaggagga gaaaaaaaag agaagaagaa gaaatgatta
       61 aaataattac aaattgcgcc ctgacaagca agagcaaaat ttagcccaaa gccatttgtc
      121 tgtaattagt taattaatcc ttacacaaat tatgagcaat aactcatcaa gcaggactca
      181 cccatcagaa attcagccga cttggatttc ttctgcttag gttgctgcag agccttctgc
      241 tgtaacttct ggagggaaat tgttaaatga ataaattagc tgcagaatga agatcat
//
LOCUS       KCHQ01000270             425 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 29475cha ultra-conserved
            element locus uce-1309, sequence.
ACCESSION   KCHQ01000270
VERSION     KCHQ01000270.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 425)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29475cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>425
                     /note="ultra-conserved element locus uce-1309"
BASE COUNT          112 a          102 c           77 g          134 t
ORIGIN      
        1 ccagtgatct gactgctagg tttcaattga cagctgagga agtgtgactg gagcgtgact
       61 caaaacggca ggcattatgg ccccagtgcc actgacgaca ctttggggat tacttggcaa
      121 aggtaacctt ttcattcttt catgccgtct ctctgcctgc accacacgaa cacacacaca
      181 cttgaattaa taacagcata taataaatga ttttcctgat tttcttacac cttacataaa
      241 aaaacagata tgccacatac aagttcacat atgaatctaa ttcctttgga ctgtggctct
      301 gagtgtgaag gtgaggtcac gcattgcttt gataaaacac atttacttgt gtctcactct
      361 atcttttccc gcctttctgt tcctgttctt caattatttg ccgcctctcc cagtaattta
      421 tagtg
//
LOCUS       KCHQ01000271             538 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 29572cha ultra-conserved
            element locus uce-1211, sequence.
ACCESSION   KCHQ01000271
VERSION     KCHQ01000271.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 538)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 538)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29572cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>538
                     /note="ultra-conserved element locus uce-1211"
BASE COUNT          125 a          131 c          143 g          139 t
ORIGIN      
        1 gtaacttttc tgtgggttaa ttaacaccat gtccattaga cattaaaacc aggccaactg
       61 taaactaaac ccgaccagat gatggtgcct ccccctgcct ctccgcagat ggttggtggg
      121 gctcagctgg gcagggaaac tgattggtcc aattcttcct cgcagggaga catccacgag
      181 gatttctgca ctgtgtgcag acgcagtggc cagttgctca tgtgcgacac gtgttctcgt
      241 gtttatcacc tggactgcct ggatccaccc ctgaaaacca ttcctaaagg catgtggatc
      301 tgtccaaaat gtcaagatca ggtaaccgca gcgcccgagg ccgatcctga gtcaggggga
      361 agggggtacc gcagtccaga gaggggccga tcagggccgg tagctgtact tgactgtaaa
      421 aagtgcttct gctgacagcg tgctgaacgt taggactgtt caatcctttg taagcatata
      481 catgatgcag tattgttttg ttgtgcttct gtcccattca ttgtgtcagt aaagattg
//
LOCUS       KCHQ01000272             303 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 29667cha ultra-conserved
            element locus uce-1302, sequence.
ACCESSION   KCHQ01000272
VERSION     KCHQ01000272.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 303)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 303)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29667cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>303
                     /note="ultra-conserved element locus uce-1302"
BASE COUNT           78 a           72 c           77 g           76 t
ORIGIN      
        1 gtagcccatt tcgtatatga gtttttcaat ttgtgtggct cagtgcacag actctttagc
       61 ggctactatg gacgatcaag cccggatcat gcagtcgatc ggcggtgtca gtctggctgg
      121 ccactcggta caaggaggca tggcactgcc gcctcctcat ggacacgatg ggacagacgg
      181 agacggaaga aaacaagaca ttggtgacat tctccatcaa ataatgacca taactgatca
      241 aagtctggac gaggcgcaag caaagttggt tgatttatat gttttattaa cttcgccccc
      301 cct
//
LOCUS       KCHQ01000273             325 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 29759cha ultra-conserved
            element locus uce-1303, sequence.
ACCESSION   KCHQ01000273
VERSION     KCHQ01000273.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 325)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 325)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29759cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>325
                     /note="ultra-conserved element locus uce-1303"
BASE COUNT           89 a           87 c           85 g           64 t
ORIGIN      
        1 cccaaaattc ctcattatcc gcccagcagg gaggagcagg tccgctcgct ctgtctcaga
       61 gcattctcgg cccgatgaga caagccccag aggagcacag tgctgggcca tcgggggcaa
      121 gccaggtctg ctcattatat ctaactcatc cttggcatct ctgcaaacca agtgccactt
      181 agttcccaca gggggggtct gggctggatc actgacgaga tggcagagca aacagcagag
      241 tggtaatgca aaaagcttta aatcaaaaga gatgtgcgga cagtagcata gtgtccagca
      301 gtccatctac aaggtacata tcaca
//
LOCUS       KCHQ01000274             342 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 29857cha ultra-conserved
            element locus uce-1301, sequence.
ACCESSION   KCHQ01000274
VERSION     KCHQ01000274.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 342)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29857cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>342
                     /note="ultra-conserved element locus uce-1301"
BASE COUNT          141 a           50 c           51 g          100 t
ORIGIN      
        1 ggaaagaaaa gcccattaca agcggtaaat tttattatgg gataacagca cataaagcac
       61 atctaaaatc gatgtgtcca atgcactttt aataaaggta atattaaagg tacagtttct
      121 aagtacaata taacaacatt catattagaa tgaaaagtat ttaaaagaca acattaaatt
      181 tcttattttt ctttacagct gtatttacaa aatgaatcaa aatacttatt ttcatattta
      241 agaatcagac aagaaggagc aaaactacgt ttgtgaatag actacctgct aaagagagtt
      301 caaaagagct ggataaaaag gtacatgatc atctgtcccc at
//
LOCUS       KCHQ01000275             701 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 29954cha ultra-conserved
            element locus uce-1212, sequence.
ACCESSION   KCHQ01000275
VERSION     KCHQ01000275.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 701)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="29954cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>701
                     /note="ultra-conserved element locus uce-1212"
BASE COUNT          158 a          162 c          177 g          204 t
ORIGIN      
        1 tttttttttt gttttttttc cctcctgcca ctgtgatcct gccttcaaag cacttatgcc
       61 tagtggccat ctgggaaaat cgtctcatgc tttgacgaag aggatgatgg cggcttgatt
      121 cgtcagttgt cgtagagaca caatgcaata acaatccttt tagcctatga aagaaaaatg
      181 ccaggatgtg tgaaacagcc agaagggtga ggaaactgtg ctttgagatg tctgtccaag
      241 agccagtgac tgaacacaaa gttatcttca ctcttgtctt cagggcaaaa tgtgagcagt
      301 cacgggaggc atgctagtgt gtcagagcca gtggagaact tatagcttgt ttaaggctta
      361 ggagagtgtt gtgaccgtag aggcctgtgt agcagctgat aggtttgagt gtgtctaacc
      421 ctgtgatctg tgtgctaaca ttggcctact ggggtaagat cagttcctca actctctgcc
      481 tttgtcccct gtgaagggag gcttacccaa ggaccccctg tttactctgg cctgcacaat
      541 ggcgaagtct aaactccctt tgtagagtgg atttaggcta gatttacttc aatttggtct
      601 gggagggccc cttttcatca gcctggaggt ctaatgccct taactggctt aacctggctc
      661 cccctgtgag cctagggccc tcatgcccac aatctctcgc c
//
LOCUS       KCHQ01000276             243 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 30000cha ultra-conserved
            element locus uce-1304, sequence.
ACCESSION   KCHQ01000276
VERSION     KCHQ01000276.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 243)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 243)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30000cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>243
                     /note="ultra-conserved element locus uce-1304"
BASE COUNT           61 a           73 c           36 g           73 t
ORIGIN      
        1 cacgcccgtt cacacactca cagagcacaa agcaacacaa atccatacta gccacaggct
       61 cctctccaat ctattttctg ctcagctggt tttaaatgaa gttattatga ctcattaaaa
      121 tgcccacaag cttgtggaag tcggccaatt acgatttaaa tttagcctcc tgctctcaca
      181 accttatctc cccctgtact acccacctct catggctgct ttttttccct ttgttttggg
      241 agg
//
LOCUS       KCHQ01000277             422 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 30104cha ultra-conserved
            element locus uce-409, sequence.
ACCESSION   KCHQ01000277
VERSION     KCHQ01000277.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 422)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30104cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>422
                     /note="ultra-conserved element locus uce-409"
BASE COUNT           86 a          129 c           70 g          137 t
ORIGIN      
        1 ctgacacagg gcccgccttt atccacatcc attttgcatt gttattaata gctatttatg
       61 ggacttgttc cagatgatgg gccaagtgct gacattaaca agacgttcag gccttgtaaa
      121 gattgtatct gtctctgctg agcgtgtaag tgttgctgga ttatgtttct gttggattct
      181 tgccttctgt cacgctcgct ccccccctat tttttccatg cttgctacag atcatccact
      241 cactcattca accagcagta ccttctcctc catttaaatc tctctcttct ccctttactc
      301 cgcctccccc tttacttctt cccccctccg atccacctcc tgtgaggccg cccacccctg
      361 agagtgatta aacgctgctg aagggccgtt atgctaacta acacactaat catttaatac
      421 ac
//
LOCUS       KCHQ01000278             481 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 30204cha ultra-conserved
            element locus uce-408, sequence.
ACCESSION   KCHQ01000278
VERSION     KCHQ01000278.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30204cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-408"
BASE COUNT          137 a          121 c           76 g          147 t
ORIGIN      
        1 aacaaagtta ccaccctcac acccacactg ggagtccaaa gtcagccaca caagcatcaa
       61 tattttacat tccctcaaga atcctcttta aagatgcaat caatgcctcc tattcattat
      121 ccatgtgtct tctaggtatg gcctttgtca ttaagcaata attcacccct ccacagtccc
      181 acattactct gctgctccat acttttacaa atgcctcggg gctataaata ctaatgaaat
      241 ctctttgctt aatttgattt tgctggtaca cttgcagtta tggctgaact ttcccacgag
      301 agaggctgat tgaacacttt cgagtcctta tggaagcagg aaaacattcc aaagagctgg
      361 ggagatcatt tccataatta ccccgattgg cagcctaatg accttctgtg acaataaaaa
      421 gatctcttgt taattccatt tctgtcgctg acattcaaga gattcctatc ttacatgttt
      481 g
//
LOCUS       KCHQ01000279             515 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 30294cha ultra-conserved
            element locus uce-459, sequence.
ACCESSION   KCHQ01000279
VERSION     KCHQ01000279.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 515)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30294cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>515
                     /note="ultra-conserved element locus uce-459"
BASE COUNT          137 a          114 c           90 g          174 t
ORIGIN      
        1 ctttattcag taatacatta tcatgcatat ttcatacggg gagattacta aaacggaatt
       61 gtgtgtcttt ctgttgtatg tctttataat tacaccttga agccatagct gatttttttt
      121 cctccctttt tcctccatat tcatgaaaag cagacttgta atttgataaa gagaagcttg
      181 tgttctcaac ttcattcaaa cggcatcatg gcgctgtatt aaagtgggca tctgtgttct
      241 cgcggcatta atctcttcaa gcacattcca gctgctgtga tgtgcaagag ggagataagt
      301 cttaaacagt ctaaagctaa gcaaaccaga caactctatt attggcttca taattgctta
      361 attaaacttt tgtcactaat cattatgagg gcaatagagc tgttatacag gctttctgtc
      421 gagcaggaaa aaaaatcaat aaactgtgtt ggggagctga tccccccacg tccctgtcgc
      481 tctcccccta tccctctctc tctctctctc tttct
//
LOCUS       KCHQ01000280             308 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 30390cha ultra-conserved
            element locus uce-973, sequence.
ACCESSION   KCHQ01000280
VERSION     KCHQ01000280.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 308)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 308)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30390cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>308
                     /note="ultra-conserved element locus uce-973"
BASE COUNT           97 a           49 c           66 g           96 t
ORIGIN      
        1 taagatagaa agtattattt tcctaaatgg aaggtgtcag atggtcacgg aaatgtgatc
       61 ggctgttcaa gatcactgct tcccatctgc aatttgtgac gtgtgaaaga ttcagcccaa
      121 atgtgctcac caagcgtaaa tcctcagcac tttctcttat cgtggaaaag caagataacc
      181 agctgtttac agatcagaga acatatcata ttaatatcat ggagagggtg atatcatctt
      241 gtttgtaaaa tattttgtta actaagtgtg gtgtggtatg gcaacctata aagtgaaagt
      301 tgtaattt
//
LOCUS       KCHQ01000281             222 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 30486cha ultra-conserved
            element locus uce-401, sequence.
ACCESSION   KCHQ01000281
VERSION     KCHQ01000281.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 222)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 222)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30486cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>222
                     /note="ultra-conserved element locus uce-401"
BASE COUNT           54 a           27 c           40 g          101 t
ORIGIN      
        1 tgttttattt tgtagatttc catttgtctg tctgtttgtt tgttttcaca gtcttgtcaa
       61 acctgtgtaa ggataagagg atagaagtta tattggtttt tatgtcaata aattcaagtt
      121 tactgtggcc atccactctt gtatgtcttt tgaagcatta aaacctatct gtatgcatga
      181 aattgtaaag ttttttctct tgttgttata attttgtaga gt
//
LOCUS       KCHQ01000282             497 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 30578cha ultra-conserved
            element locus uce-400, sequence.
ACCESSION   KCHQ01000282
VERSION     KCHQ01000282.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 497)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 497)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30578cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>497
                     /note="ultra-conserved element locus uce-400"
BASE COUNT          131 a           93 c          145 g          128 t
ORIGIN      
        1 agacaacatg ctgttccaat ttgaaatggc tgctttattg ggggacagcg acacagggga
       61 gagagagaga gggggaaagc gagagcgagt gggagagata gagtgagaga ggagggggcc
      121 tgtgaagaaa aaaagaaagc caggggaaag acggtggtat ggaacatttg ttagtaatcc
      181 aattccacat accatatggc ttcattacca ttatgcggca gagaagactt cagtcagtct
      241 gaaaataaag acctacttag ccccatccaa actgacccca aatgagacat gtttgtctcc
      301 gtgtgacagt gttagtgtta ttgccctgct cttgcattct ttgtggtcgg tttagattga
      361 gcctgcagct gtgcatggtt tcagtgtgtg cgtgttcgtg cacgtacgtg gccgcctgtc
      421 tcttggtgtg tgtaagatag ggatcgggcg gtttaccagt gactgatcat tacggaagac
      481 attccttcat cattact
//
LOCUS       KCHQ01000283             810 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 30768cha ultra-conserved
            element locus uce-405, sequence.
ACCESSION   KCHQ01000283
VERSION     KCHQ01000283.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 810)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 810)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30768cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>810
                     /note="ultra-conserved element locus uce-405"
BASE COUNT          246 a          196 c          160 g          208 t
ORIGIN      
        1 aaacctttag aaagaaccgt tttgatgtga ccatattttg ggggccaccc aatttgttac
       61 ctaactgcac tgtcctagaa taaaaagacc ctctgaagag aagagtagct catagtagtt
      121 cagacacagc tttgctaaag aggccgcagc agtgagcggt cttgccctga atacacgata
      181 aaaggtttac tgtaaatcct aaatggcgtt ttctgcaacc catacatcac tcatgaccat
      241 taggttccac cctcactgca cagtgcaccc ttccagccac agctttccag atgatacagt
      301 acagaggctg cagttcaggc agatctgcct ttgaatagcc tgcagccaat ggattttctc
      361 tggataatac aatgtttggg acagagaggc agggattagt ccagacggat acatccacca
      421 ccccccacat gcccaatcta attagactgg aatcagttta agatgaaagc aagccccagc
      481 atcaccgcac taaatactgg aattagtatt ccccgcatgg gaatttaatg acggagactg
      541 aaaatccaat cacattcact cccagttcag cccctcatgc attgggcctg gacaatgacg
      601 aaacgaaaga acaacaacaa tgatttgcct gtcaatagat attgaccaac atcacatctg
      661 aggccacttg cgtattggcg ttactatgtt gtcatcattt aacgaggata aacagctcat
      721 aatcagatat ttagacagtc tgtttctgat atacaccttc gtcacattca cgcctgtagt
      781 cttgtgtgta tttataatat gaaagcaggt
//
LOCUS       KCHQ01000284             376 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 30940cha ultra-conserved
            element locus uce-407, sequence.
ACCESSION   KCHQ01000284
VERSION     KCHQ01000284.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="30940cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>376
                     /note="ultra-conserved element locus uce-407"
BASE COUNT           98 a          108 c           75 g           95 t
ORIGIN      
        1 ctctctgtct cttccgtctc tctctctgag taagtgagtt tcatctgggg tgcttgccgg
       61 gcgaaatcac ctcagggcga acactttatt atctgtagtc aaagcgtcac cacaaatacc
      121 attctacaca cacaagtgtc actttccatt tgtctgcact ctggctgcat tagcagagcc
      181 tagccagccc agagcctcgt ctcaaacgcg ccggcagaag aaaactaaca gcgtgggaaa
      241 gcgctcgtcc tgcattcctg ccccattaac accactggca ccatcaaagc agacctgctg
      301 cctctctctg gaattaaaac attgttatca gcactaacct ttgtgaagat ttgaaaggac
      361 aaaacgatat ttaggc
//
LOCUS       KCHQ01000285             425 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 31034cha ultra-conserved
            element locus uce-406, sequence.
ACCESSION   KCHQ01000285
VERSION     KCHQ01000285.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 425)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31034cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>425
                     /note="ultra-conserved element locus uce-406"
BASE COUNT          108 a          101 c           93 g          123 t
ORIGIN      
        1 cccattggac catcttcttt ttcataaatt tagggaaaat ataatcattc tttttaatta
       61 ctgcacccag gcactctatt aaaattctaa ttcacctcat ccacctcgat tgatctgttc
      121 acagtgggtg gctgtggtga aatgcactgt ataatattca tgctggtacg ccttggttgt
      181 gctgtgtgtc agaagccatc ttgcagcgaa tccctcaccc accttggagc gcagcctgtg
      241 gaactgatga ggtgaagagc attgctctgc agctccatgc tagtaatcac gggactgaag
      301 aaacacatac atcatctgcc acacaggttg gcatggcgag tgaaaagcct tcacatcgcg
      361 taagatgttg gacaaatgat ggccatacgt gtgtttgtct cctcacagat ggctgtgcat
      421 cttca
//
LOCUS       KCHQ01000286             447 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 31223cha ultra-conserved
            element locus uce-969, sequence.
ACCESSION   KCHQ01000286
VERSION     KCHQ01000286.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31223cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-969"
BASE COUNT          137 a          121 c           81 g          108 t
ORIGIN      
        1 cacacacaca cacacacaca gatgtacact aagtgcattt tgtctttcaa gcgctgacat
       61 agatgcccca ccaacatcca tgcgtgcgcg cacacacaca gacacatgca catggttgta
      121 aatgggagac acactcacac aaacacatgc gtgcacacac acacatgtag acacactttc
      181 atctgcattc tccatctggg cttaattcaa agaaaaggat tttggcagga taaagtatct
      241 ctctaatgat cttctccagt tccactgcct gtgaatgctt aaggcacttg ttcatacaga
      301 ggaggtgaaa ccacacttac aaattactac actataagat accacagact gacatacctc
      361 cactccagtg ttcagtgccg aacatctgaa tctgttattt tagcctgttc gcgatacctg
      421 cgcggaatga gctggatact cgagatg
//
LOCUS       KCHQ01000287             511 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 31319cha ultra-conserved
            element locus uce-218, sequence.
ACCESSION   KCHQ01000287
VERSION     KCHQ01000287.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 511)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 511)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31319cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>511
                     /note="ultra-conserved element locus uce-218"
BASE COUNT          106 a          120 c          155 g          130 t
ORIGIN      
        1 tgtaaaccac cagagggggc caatgatgaa gactgggcct gaagaatcaa ctgcaacttc
       61 acacgacacg cgagctcaca acactgtttt acatgtttta caactggaaa gcagattata
      121 tccatcccac ctgtcaggtc tcccttcctc ctctttattt tctccttcta catgcggcat
      181 ggccctcctc atcatccaca tccccaacac cccccctctc ggtggtcctg tcctctccca
      241 gggttcagac taatgactag tgacagtcca ctgaggggag cgagctgttt gcagtcagca
      301 gtgcgtttgt tggtaattat tttccagagt gtcacattag tgtcagcctc gtggcggtga
      361 gagaggagag aggacggggg ccccggctgg ctggatgggt gaggcagaga gcgaggggag
      421 gggagagggt gtgatgtttg gtggtgggca gcgtgtgttt atgtgtgtgt atgtgtgtag
      481 actgaagtgg tggtggtggt gggttgacga c
//
LOCUS       KCHQ01000288             274 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 31409cha ultra-conserved
            element locus uce-1216, sequence.
ACCESSION   KCHQ01000288
VERSION     KCHQ01000288.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 274)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 274)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31409cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>274
                     /note="ultra-conserved element locus uce-1216"
BASE COUNT           69 a           68 c           73 g           64 t
ORIGIN      
        1 tgtgtgtgtg tgtgtgtgtg tgaagccgct gcgcatccac atctttgcgc ccgcttatag
       61 aaacacgatg atagcggcgc tccatctgat cctaatctat acttatatca tatgcaattt
      121 gtcattcagg tgtcatcgat aaacagagtc ctccgcaacc tggctagtga aaagcaacag
      181 atgggcgcag atggcatgta tgacaagctg agaatgccca acggtcagac aggaacttgg
      241 gggacccggc ccggctggta ccccggaaca tcag
//
LOCUS       KCHQ01000289             226 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 31506cha ultra-conserved
            element locus uce-214, sequence.
ACCESSION   KCHQ01000289
VERSION     KCHQ01000289.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 226)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 226)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31506cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>226
                     /note="ultra-conserved element locus uce-214"
BASE COUNT           74 a           40 c           74 g           38 t
ORIGIN      
        1 gttaagtcct gccattttgc ccagatgcat aaataataac agtaattact ggcccagcaa
       61 tcaaagtgtc gccccagcgc gctgggcctg tctaggggaa caaatcgata ggcatcttaa
      121 aagccacatt gattgtaggg agggggaaaa acaccaaggg ggatgggaag atagatagag
      181 acagccggag agagaaagag agggggagga aaggaggcga ggtgtg
//
LOCUS       KCHQ01000290             628 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 31695cha ultra-conserved
            element locus uce-960, sequence.
ACCESSION   KCHQ01000290
VERSION     KCHQ01000290.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31695cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-960"
BASE COUNT          158 a          169 c          121 g          180 t
ORIGIN      
        1 gtcactcaag tcataagtta gtctttgcgg ctaatcacgg ctaactcctc agaacctcaa
       61 cagccctcac cacaagcctc ataccacctc gtctcattcc cacattccta cagccctctt
      121 tccacaccac tcccacatcc accctccgca gccccatccg agcccaccct caccttctca
      181 atccactctt ggatcatttc aatttgcatc ccaactggcc ccgggattcc ctagccctgt
      241 taaaaggcag gctatttgtt gtgctccgcg gttaatgccg cgcagagctt taaataccca
      301 tatcaaatct tggaggctca acagattcag ttttgcaaac ctgtatcgaa cagaggttca
      361 atccgtcagc ttagaagtgt acactcctta agttgtgtga taaggtaaaa ccaatcactg
      421 gattaggctc tctctgtcag tgatggtgta ttttcagtgc acagcgttgc tttgctgaaa
      481 caggataagc tgatggagta acattatggt gcttgagatt tctttttcaa taggaatata
      541 ctattaatgg attctgaagc cagtgtatga tgctgctctt gcagttgtgg ataatgcatt
      601 agcattagct gtgaaaagca gttggtgt
//
LOCUS       KCHQ01000291             400 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 31791cha ultra-conserved
            element locus uce-961, sequence.
ACCESSION   KCHQ01000291
VERSION     KCHQ01000291.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31791cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>400
                     /note="ultra-conserved element locus uce-961"
BASE COUNT          105 a          112 c           89 g           94 t
ORIGIN      
        1 ttttccttgt cgttttaatc tggcatgtgg cggcactcac cgactccagg cccggtgaca
       61 gagctggctg gcttgttttg tgcagaagcg gcagcggcca cggcagtgcc gtatccgccc
      121 ttacagaaat ccccactccc tgaagcctgg cccacatcct catagcctgc aacagtcaga
      181 cacacagccg cagcccacag cgttagacac accaggcagg ggaagcagac ctgcctcaga
      241 tagcatttgc aaataattca tagcgttttg tttgaaaccg tgcaccacat gaacaggttt
      301 tatcaaacag tgacaataca aatagtgtca agtcctctag gagctatact gatgcctgta
      361 tacttaactg gaattatctg aactttgaca ccaaatgcat
//
LOCUS       KCHQ01000292             448 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 31870cha ultra-conserved
            element locus uce-966, sequence.
ACCESSION   KCHQ01000292
VERSION     KCHQ01000292.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 448)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31870cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>448
                     /note="ultra-conserved element locus uce-966"
BASE COUNT          125 a          101 c           99 g          123 t
ORIGIN      
        1 gagatgaggg gaaacatcat aaattctgac aaggcgctgt tgtctgctgg atgataaaca
       61 gcactgttgg atggaatctg cctctctgtg tatctctcag acgctggctg ccactttatc
      121 tcttccatcc tgctagatta cacctccagg gttcaggtgg gaatcaatca ttgctattat
      181 tacctgaagt cacaagatgc atctatcacc actaaggtta ccataacctc aatattaaca
      241 gaggaaaagc ccctctaata aacagcagaa aggatgggct ggctggtggg atttcatctt
      301 cctttcactt ttaataaggc actcagagga ataaagatta caggccatat ttagcatgca
      361 gaacaaatca ggctcttcca ggctcttcct ctcctccact tctcattctg gttagtcatt
      421 aagactgagg aggagtgtgg agaggagg
//
LOCUS       KCHQ01000293             657 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 31911cha ultra-conserved
            element locus uce-211, sequence.
ACCESSION   KCHQ01000293
VERSION     KCHQ01000293.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 657)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31911cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>657
                     /note="ultra-conserved element locus uce-211"
BASE COUNT          159 a          160 c          123 g          215 t
ORIGIN      
        1 aataaataga ctgtagtatc acttttactg tataaacttc atcttttttt acatgcagtc
       61 cataaaattt tcatttgacg gaataattta ccctgttatg tatatataca aatagatatt
      121 ttctctttat tctctttttt aaactcttca ataaaatcta tacattttat acactatctc
      181 cctcttttaa tggtcaatgt gcatacacat gaagtgtcta tccttataaa ccgccagcca
      241 atcttctttt tgctatccat ggtaagcgct cgcacgtagg actgggttgt cctgcattgg
      301 gaattataat gccgcttgtc tattcctctg cagccctcct ttgtgtaccc catggggttg
      361 catttggtct cataaaagta ttgcttcagt tggccattgg ggacagggac cttttccatg
      421 acggtaactg tctgcccaga catgtctatt gccgtctttt tatccacagc tgtcacccac
      481 tggctaatac tgtcacacac gctgagctct ccacgccgcg agggatcgga gtgtcgccgc
      541 accctcatgg acatgttagc ggcatccaga tagtttttgt attcctccag aagaaagagc
      601 aacggcggct ccaaaggcac ttggttgctg atcatcaccc gcgagtcgta caggtcg
//
LOCUS       KCHQ01000294             417 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 31979cha ultra-conserved
            element locus uce-212, sequence.
ACCESSION   KCHQ01000294
VERSION     KCHQ01000294.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 417)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 417)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="31979cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>417
                     /note="ultra-conserved element locus uce-212"
BASE COUNT          119 a           66 c          116 g          116 t
ORIGIN      
        1 tactgcgttt actgagttac atgtagatag aaagggattt ttctgaggct gctgttgacg
       61 ttgcgtgtcc atgtgtttct gtgtcctcac tataaacaat atctctgctg ttgaaatgga
      121 tccactacat ctggaggtca ggccttatat tcaatcttga gcacattgaa aaaaaaatcc
      181 attagggttc atctttcctg catcagccat tctattgtgg tgctgcagtg agatctgttt
      241 tcatcaggca gattcaatac gtgagctggg caatgaaaag agtgcaatag agttggatga
      301 agtgaggagg ggtgaggatg ggggggtgag gcagaggagg gcattgtggg aaggaaagca
      361 agaagaaatt gcaaagggga aagcggtaac tcttattcaa aatgagcata tacctca
//
LOCUS       KCHQ01000295             273 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 32069cha ultra-conserved
            element locus uce-965, sequence.
ACCESSION   KCHQ01000295
VERSION     KCHQ01000295.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 273)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 273)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32069cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>273
                     /note="ultra-conserved element locus uce-965"
BASE COUNT           80 a           51 c           49 g           93 t
ORIGIN      
        1 ccattgaaat tcatctcaca gcctgaattt acttaactgc gggtctgtgc gcagtgataa
       61 acggagtgat gatccggcaa cacgtcttta tccatgcttt gctttaatta acggcggctt
      121 gtttgttgaa aagatgatta atatgccaat gaaaattgca taattgaata ccacaacacc
      181 cgcacaatca gggaggaaca tgccattttt tattaacttt ttattgtcat tattattact
      241 attatttggt attttaattc acttgacaag cgg
//
LOCUS       KCHQ01000296             773 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 32250cha ultra-conserved
            element locus uce-48, sequence.
ACCESSION   KCHQ01000296
VERSION     KCHQ01000296.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 773)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 773)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32250cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>773
                     /note="ultra-conserved element locus uce-48"
BASE COUNT          245 a          170 c          205 g          153 t
ORIGIN      
        1 gagatcatac caaacacgtc ctgcacacac tcagcattca tctgtcatgc agcggcagca
       61 tgaacccctg ttttcaaaaa ttcaagagca gggtgaaaaa caaaatgagt gcaaatgaag
      121 catgtctctg agtggaatat tgtacactca agccgtgcac atgcatgact gtgaatggag
      181 gacggagtga tgatgacaga gaggatgaag gagcaataga ggcagagaga gcaagagagg
      241 agagacagag ccagagtgag aagagtggag ggggtaatga ctaggtctgc tcaggacaga
      301 ggaggcgaca gagggggaag cgtctccgat cgtctcctcg tggctcctct ttggcgtctg
      361 tgatcctcgg acccttcacg caatctccct tattacaagg cttcccctct ccacacgggc
      421 accactacaa aatggagcaa ttacatttaa ttaggctgca gagggttagc tagcctgccc
      481 catcccaaaa cctcagagaa gcgcagactt caggtaacac aacggtcggg gagaacttca
      541 aagggatgca aaattacagc gccattagtg gagccaccac agaactgctg tgaagccagg
      601 gaatcatttg acccagagag gtagattcaa aggagtcaaa actgaaaagc agagcagtgg
      661 agacaaaaac atctcaacag ccacagatta aggggcagac tgagcacttc tctaaacatt
      721 gtttgtgttg tatgggagac ttgaaaaatt aaggagtctt tacaatgcct att
//
LOCUS       KCHQ01000297             424 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 32528cha ultra-conserved
            element locus uce-1219, sequence.
ACCESSION   KCHQ01000297
VERSION     KCHQ01000297.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 424)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 424)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32528cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>424
                     /note="ultra-conserved element locus uce-1219"
BASE COUNT          124 a           86 c           89 g          125 t
ORIGIN      
        1 cttctctcac aattattctt aaacattcaa gtcatcctat taatactttg tacagcagaa
       61 aggtccttca gatttcacat gtgtatatat aaatataata tatagaaata tgcatataca
      121 tatgttcaac ttgtatatgt gtatacatat tttggaactg tatcaaagcc aatttaatgt
      181 gctctcaaaa tatggcccat gattcctagt gggatgcaca tcaattcaca tagtacaacc
      241 agtagattag gttgaaaaat ccaaaggtga ttgggaaaat gacccgggac cacttgtcaa
      301 tggtgctaac atctgacagg tttgggattt tcaacttgag cttggaggag cgtcgccgta
      361 gccgacagtt ggcccggctc cgcatggcgc tccggtccag cgagtggtgg ctgaagccgt
      421 ctcg
//
LOCUS       KCHQ01000298             376 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 32706cha ultra-conserved
            element locus uce-45, sequence.
ACCESSION   KCHQ01000298
VERSION     KCHQ01000298.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32706cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>376
                     /note="ultra-conserved element locus uce-45"
BASE COUNT          116 a           85 c           79 g           96 t
ORIGIN      
        1 ttcactctcc gcttttattc tttccctaac agttaaaagg atctagtatg catttaagca
       61 acataatagt acactacctc accagctttt atcctgtctt aagctatagt gtgcggggcc
      121 catgtgcgca ctcaatcgcg ctgccgtaca cacaaacgta aggtcagaga gccaacaagc
      181 cagaaaagct tgtaatggag agcgtttatg ggtagtaatg caacccaaat acaccaccgc
      241 tcctgctcca aatgtgatca tttaatcaaa gtacagatgc acaaagtctt cttaaataac
      301 ctttggattt ggctgtattt gggaattata aaggcaaagc tagaggctga gggccaaagc
      361 agatcacagg gaaggg
//
LOCUS       KCHQ01000299             214 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 32791cha ultra-conserved
            element locus uce-46, sequence.
ACCESSION   KCHQ01000299
VERSION     KCHQ01000299.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 214)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 214)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32791cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>214
                     /note="ultra-conserved element locus uce-46"
BASE COUNT           69 a           42 c           57 g           46 t
ORIGIN      
        1 atggtgtccg aggccacatt gaagaccagc caggtggtgg tagtctgctc tgagaagaag
       61 gttattccca caggaatgat gattagattc cccatcatca tgatgagcat aatcaagtcc
      121 cagtagaacc tgcagagcga cacatatgaa tcagtaatgc aagggagaaa acgtgtcgta
      181 gaaggtgaat gcagacaatg ctcacatatg tagg
//
LOCUS       KCHQ01000300             286 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 32886cha ultra-conserved
            element locus uce-47, sequence.
ACCESSION   KCHQ01000300
VERSION     KCHQ01000300.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 286)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 286)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="32886cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>286
                     /note="ultra-conserved element locus uce-47"
BASE COUNT           87 a           55 c           88 g           56 t
ORIGIN      
        1 ctgaccaaat atacccagtg acagagcgag agagggagac ggacgcagag agggaaggag
       61 agagggggga gagaagatga gaatatatat gcggtggcca gtgttgtgag acaaggcagg
      121 ttgctgtcac tttaaaaatg actgtaataa aagtgaccgt cggaagatgg atctggtgat
      181 tttggcttgc taatcagtca tctgtgaaga ggaccacagc ccagattcag cggccgcctg
      241 acacctcttg attgatgcct gcgcccgata aaaaaggccc attaac
//
LOCUS       KCHQ01000301             249 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 33053cha ultra-conserved
            element locus uce-42, sequence.
ACCESSION   KCHQ01000301
VERSION     KCHQ01000301.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 249)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 249)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33053cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>249
                     /note="ultra-conserved element locus uce-42"
BASE COUNT           49 a           74 c           56 g           70 t
ORIGIN      
        1 tgatgggctg gatggggcca gggcacacgt caatggccat gtgctcctgg atgctgatgg
       61 tgggtttctc gcctttgcgt tgtgtcatgc atgcggtcca gcccggagcc tactcccaaa
      121 accaaaagaa ctgagaaaag aaaaaaaaag gaagacccac ccccctcgtc ctcctcctcc
      181 tcttcttctc gttcctggct gacgttttcc gtcttttcgc ttctttcttt ttatttctca
      241 gcctcaaac
//
LOCUS       KCHQ01000302             539 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 33147cha ultra-conserved
            element locus uce-766, sequence.
ACCESSION   KCHQ01000302
VERSION     KCHQ01000302.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 539)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33147cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>539
                     /note="ultra-conserved element locus uce-766"
BASE COUNT          158 a          118 c          133 g          130 t
ORIGIN      
        1 tgagctgaga aaacatctct agatccctcc tgtcttgata tataaagctg cagggcagcc
       61 aattgtggca gacagaggaa gacgggtgcg gtggtcgatt ggcattacgc tggcggttga
      121 aatagccccc ttgtttttgt tttcatctct gggagaacca ttgtggctga tgactcctat
      181 ttaaaagacc atccaatatg cagggatgtc acctcaaact gcccataaac gtaattgccc
      241 gtccatttgc ttctgccttt agaagccccc aataaaagca gcctgtcaga cgcgactgcc
      301 acaaagttta gtgacaagtt ccagcagcaa aagttttgta gatgctaacc gagcagaaga
      361 ggatctgaag gcagcgacag acagagagag agaggtaact accacttgtg tcatattcta
      421 aagaaatgaa acgtctgcct ataatccctc acacttggaa aaagtacgat tacagcacag
      481 gtgtagcgga gtgtgagtga gtatgcgtat cggcactgac atgcaggttt aaaggatca
//
LOCUS       KCHQ01000303             902 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 33250cha ultra-conserved
            element locus uce-148, sequence.
ACCESSION   KCHQ01000303
VERSION     KCHQ01000303.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 902)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 902)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33250cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>902
                     /note="ultra-conserved element locus uce-148"
BASE COUNT          240 a          208 c          224 g          230 t
ORIGIN      
        1 ctctacttga ctgtctccca cccttgtatt gtgtatcttt ctgcctgcgt ccttttcttt
       61 gtcacgcctg tgtccctgtc atctgtccag tctcagctcc ctctgagtta aacaggccga
      121 acaaatagat tacaaacagt gggtagagtg aagctaagga ggaagacaat ctgaatttgt
      181 tgtggataaa gaatgaggaa ggaggctgtg cagtcaaaga aagccagtgg agtcagagta
      241 aggctgtatt tgcctgaggg gaaaaggctg aaaagtagct ctcgcaacag atgtgcgggg
      301 cagtaaagtg taattgaaat gccagcagca atggtcttat ctccctgcta caggagcctg
      361 ctgccagtct caacatcagt tagatgtcat tttacctaag tctgaatcag cttgccacaa
      421 tccgcaatcc ccattcctct gatgctaggc aggagaaaaa gggagaaata gatgaggggg
      481 agggaaagga gaaagaaaag gagggtgggg agtctgtaat aggatttcag cagcacccag
      541 ttaacttcca ccacctggac gtagttggta atttgatatg ccccatcaat aggattcatt
      601 tacctcaccg cggtattacc atcgccattc atttgacttt ttaaaaaata tatttattca
      661 tttctctctc cacattcctc cactcctccc tgatcctaat catgcatcct ggaggtggga
      721 ggaaggaggg gctgctccac aatattttag ctaataaaga aagtccttgg tccagaggag
      781 gtgtgaagcc agacaccacg gctatcctct gcgctccagg caaagcttaa tgttttgggc
      841 caggcgggat ccctccgggg agaaccgtat gtcccctcag attagaggct ggcactcctc
      901 gg
//
LOCUS       KCHQ01000304            1067 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 33536cha ultra-conserved
            element locus uce-980, sequence.
ACCESSION   KCHQ01000304
VERSION     KCHQ01000304.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 1067)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1067)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33536cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>1067
                     /note="ultra-conserved element locus uce-980"
BASE COUNT          261 a          291 c          177 g          338 t
ORIGIN      
        1 gaacaccctt aaaagccccc tcatgaatat taaaaaggcc tttggcagcc ggcagctctg
       61 ctacaagttt gcaaaccagc gtaatgtgtc tgtttgcgct gggagaggac tgagtccgga
      121 tatcaattaa atcaagcgtt gtcagtctga tggccctctc aatggaggga cagcccattc
      181 ccctctacac atcaactcag ctttgtgtca accatccatc tctcatcctc cccttccctt
      241 cctcctcttt gccggctgcc atctttatca gcctcgaccc gctctctctc tctctttctc
      301 tcctttgctc tctctccctc tctgtctctc aagcagccgg taactgaacg cacaaattac
      361 tctcccctcc acctttaact cccactaaat ctttcccctt ttccactttg ctgagccggg
      421 atattttatt cctccatcaa atatgcatcc cattaattaa gttaaattac tcctgactgc
      481 caaatatccc ctgccccgat gggtgtcaac acagaaatgc atgactgtga acctgcaatg
      541 acacggcccc aacacttaaa catgagttac agccttttcc agctccatcc atgggcagat
      601 taccagacac tttgggctgc tggaattaag catttgctcc ttcccctcca cccagctttt
      661 taataagagc acaatggatg acactcgcac ttctgacaat gagaggactg atattttaat
      721 tacacccctt ttttcatctg ccttgctctt catcttttaa ttgctgttgt taatcactca
      781 ttaactttcc cttctttatt tttttttctc ctacaatata cctatgacac gattagctct
      841 atagaatgga ttgttcagca acttttttta aaataattca actactttaa aggataaagt
      901 ttctacttct tttgtaggga cctggtttgg ggtggagggt gcaaacttta ctcatgtttc
      961 tctagtgaaa ggagccgatt cgccttgtta gcggatgcta atctttagag ggtaaattca
     1021 aagtgtatga atgctatcaa gatagggtct cgtaaggcaa aaattac
//
LOCUS       KCHQ01000305             729 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 33583cha ultra-conserved
            element locus uce-981, sequence.
ACCESSION   KCHQ01000305
VERSION     KCHQ01000305.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 729)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33583cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>729
                     /note="ultra-conserved element locus uce-981"
BASE COUNT          225 a          165 c          166 g          173 t
ORIGIN      
        1 gcacacacac acacacacac actcatacaa tcacccaccc acacactgct tccccagctt
       61 gtcaacgtgc aacgtgggct gtggaggctt gtgcgaacag atgggaggaa ccagcataaa
      121 ataaagttaa actagaacag aatgactatg caagtggcgt ggccgccctt tgtttgctag
      181 gaaggtgatc ctcagcagct ggggatgatg gaacgcatga ttaaaattac cagagggaat
      241 gattaatatc tccttaaagc acacacttcc agcatatcaa tcatctcatt acactggaaa
      301 agttaattgt gtgaggggag ggttggggcc cctgaaccat gaaaaagtag cccacccctc
      361 gacatgttta cttacacaac agaacagacc caataactcc atgtgttctg tacagtgttt
      421 tgagagtttc cactgtttcc acaggaacag gccccactcg gcaggggaca ctgtgcttca
      481 cagtaactgg aatttttact gactgacaaa actttgtctg ctgagtaaca attgcaaggt
      541 gtaggctaat acatgagttg ttacagagct ataaaaaagc tgacatttgg tgttaaacaa
      601 tgcaaaatca gttttgggtg gagtgggggg gattgaaatt tgaaagaaag tacagcaggt
      661 tctgcagtcc atcactacat gacgctctca ccgctgcgca cacgttaata acactcatga
      721 aaacagttg
//
LOCUS       KCHQ01000306             348 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 33659cha ultra-conserved
            element locus uce-982, sequence.
ACCESSION   KCHQ01000306
VERSION     KCHQ01000306.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 348)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33659cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>348
                     /note="ultra-conserved element locus uce-982"
BASE COUNT           98 a           70 c           83 g           97 t
ORIGIN      
        1 gagatcactc ggcggggctg aggataaaat gtcgcttagg ataatgtgat tgcccttaag
       61 gtacaaggag gtgaattata ttccctgatt tataatctga aaattaaaga ctcactcatt
      121 ttctaattta attccacctt caatggaaca atgttcactc tgagccaaat tggcgaataa
      181 tgttactaat tcagatgcag atgtaatttc tatttggggg gctgaggcgc gtggtgatga
      241 acgagtcccg gatggatcgt tgccactcct atctccccgt ctcgacaatt ccccagcagt
      301 tgtgataata acctgagcaa taaaggaggg agaggcagtg ctaccctg
//
LOCUS       KCHQ01000307             367 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 33759cha ultra-conserved
            element locus uce-983, sequence.
ACCESSION   KCHQ01000307
VERSION     KCHQ01000307.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 367)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33759cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>367
                     /note="ultra-conserved element locus uce-983"
BASE COUNT           84 a          105 c          102 g           76 t
ORIGIN      
        1 caacgccagc gtcagcgaac gtgggagaca aggactccaa ggagcattca gaggagcggg
       61 gggagaaggg cggggtgacg cgtcacccgg acaacccgct ggacatagca gtgacacgtc
      121 tggccgatct ggagcgcaac atcgagagaa ggtacctgag gagcccctta ggtaccacca
      181 ttcagatcag gctggataat gtgggtacgg tcactgtccc tgcccccgcc ccatccacta
      241 gtgctgacag ggaagggtag gtcatttctc caaccaaagc tccccactct cccactaaga
      301 cccttttcct ctttctgtgt gtgctttttg tttcccatat tactcaaaaa gtgagggtct
      361 ttgctgc
//
LOCUS       KCHQ01000308             365 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 33855cha ultra-conserved
            element locus uce-823, sequence.
ACCESSION   KCHQ01000308
VERSION     KCHQ01000308.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 365)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33855cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>365
                     /note="ultra-conserved element locus uce-823"
BASE COUNT          127 a           83 c           76 g           79 t
ORIGIN      
        1 ggaaaaaaaa aaaaaagaga gagggagaga gagaccaggg aggccaatgt caatcccacg
       61 gcaaacagca gtggataatc atgggcttta ggaaaacact gtgtccataa tgctattacc
      121 caggattacc tactccagca gagaaggcga gactctcttc acaatgtgcc acagaccttt
      181 cagataatca tcttatcaca gatgacaaac ccagaagaaa catcccatta ttcaagaagg
      241 ggggaaaaat ctacagcatg tctggatgaa gacatattgt aagcctaaat tattcgagtg
      301 gaaaaatatc agattttgaa attagcacgc tggtcgcttc cccactctcc ctctccctct
      361 ctctg
//
LOCUS       KCHQ01000309             555 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 33945cha ultra-conserved
            element locus uce-822, sequence.
ACCESSION   KCHQ01000309
VERSION     KCHQ01000309.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="33945cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-822"
BASE COUNT          198 a          107 c          113 g          137 t
ORIGIN      
        1 ggaccccact gtttagcaaa cactcctact gaggggagga attaattatt cagagccaag
       61 gaccaaggca gccccatttg attgcaccac aaaagaaagg tcagagcttt tcatatgagg
      121 aacctcctgg ttctgcaccc tgtcagctga ggggatgtgt acagtatata aggctgaaca
      181 gcagactgac taacagctca attaaaaggg caaggacgtc tagatgagga tgtgttcaca
      241 cgacatatga caaagacaac atggtcttgc taaaaggagc tgaagatatt tccatcatgt
      301 gaagctccaa gatgtcgacc caacgggtaa agaatcaaga cagctgctgg gaaagattaa
      361 acacttccag aaccacagag aacagttttt gctcaaatct aaccaaacca ttacatttcc
      421 tctccccgca agttagaaaa tgatttattg cgtgtttaaa tagttaatag gtaataatag
      481 aatttagcaa atgaataaca tattatttaa tcattgaaaa atgactttca aaggactaaa
      541 ttgataggtt taaaa
//
LOCUS       KCHQ01000310             271 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 34043cha ultra-conserved
            element locus uce-820, sequence.
ACCESSION   KCHQ01000310
VERSION     KCHQ01000310.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 271)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 271)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34043cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>271
                     /note="ultra-conserved element locus uce-820"
BASE COUNT           69 a           72 c           55 g           75 t
ORIGIN      
        1 gttacattta ctgctggcct cctctatctc tctccctctc actccctcct ccctgtacta
       61 accctctgac accagactct gagaatcggt ggaggggaaa atgaggcttt ggagctgaag
      121 aatttacagt tagtcgcgaa acttttacaa gtatttgact tgctcactcc actttctgaa
      181 accctatagt cacatttcac tccggggtca aaaagagttc agatttagac ggctgaggta
      241 atgctttctg cacgagcaaa acaccgagga g
//
LOCUS       KCHQ01000311             539 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 34139cha ultra-conserved
            element locus uce-827, sequence.
ACCESSION   KCHQ01000311
VERSION     KCHQ01000311.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 539)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34139cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>539
                     /note="ultra-conserved element locus uce-827"
BASE COUNT          161 a          134 c           97 g          147 t
ORIGIN      
        1 gtcaccccta acatggttcc tcccaatctg ctcacttatt tcactttcac agcaacaaat
       61 actgtttcac attttccact gaagctgctt cagcgtgtga cctttccgtc tgatacagtt
      121 atttctcttt taggcatgcc gtattacaga cacacgtaaa ctgaaattgg tccattggtc
      181 tgcatgcacg cacacaaaca cacacacata tacacataca cataaagtgg ctggtgagct
      241 aactaacctc tgtctggggt cactaccctt tggtaaggat ggattctctt gtcgtggcgt
      301 cgtaccttag tggtcatggc acctgctaac agccattgac atcgccaaaa cagaacacag
      361 aaggttactc atcagaaaga catcaaacag tccacccatg gcaccaacat cagtgaaacc
      421 aggaatttac aaaaagtgtt caaggctgag ggtgaaaata agtcaaaacg cttcttctaa
      481 gagacagaac ttttgttgtt ttgtggtctt ctgctctcta aagaaaatat taatccaaa
//
LOCUS       KCHQ01000312             489 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 34238cha ultra-conserved
            element locus uce-826, sequence.
ACCESSION   KCHQ01000312
VERSION     KCHQ01000312.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34238cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-826"
BASE COUNT          130 a          127 c          109 g          123 t
ORIGIN      
        1 gacgccagcc acctatataa acgtctgcac gagtcgtctg ttattgttta tagacttaca
       61 accgcagaga aatgttccag gcttaacgga gcattggtgg taataagtaa gagccgaggc
      121 aaaaaaaaaa gaaaaaacta tagtccttcc attcaacccc cacacacctt gctccaccgc
      181 tccgctggag aaaaaagggg aataaaatag agtgaccctg ccactagcag ctctcttttc
      241 cccccactgc tctcttcttc ttcccccttg ccgtgtgaaa tcaaatttcc atgtggctcc
      301 cgtatctgtt gcacagcgag gtgatttatc agggatgcaa agagcatgca gaaacaatct
      361 ttattacatc catttcctgc ttgtcagccg ggatcatgtt ggctgttcat taaaggcgcg
      421 gcgcaggtga ggagaatgca tcccgatgcc ttgatagatt gtctgctccc ctgtggtgac
      481 agcagctgg
//
LOCUS       KCHQ01000313             323 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 34302cha ultra-conserved
            element locus uce-824, sequence.
ACCESSION   KCHQ01000313
VERSION     KCHQ01000313.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34302cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-824"
BASE COUNT          115 a           61 c           87 g           60 t
ORIGIN      
        1 ttgggggggg ggggtatcct ccaaaccaat cagagagctg gcagttcaat tacaaagaaa
       61 taaagggaca ttcatcattc aattaggcac ctgtcagggc tcacaaaaga agaaaacttc
      121 taacctggta ctccagggag aagatgctca gaagagtgga ctgcgagtga ctggaacaaa
      181 taaaagaagg acaaagttaa ttaccagagt gcattgcaca gagacaaagg gagaggggga
      241 gcttcaaagc tggggccagc tgccctgtaa tctaaaagaa catgaaaaca agtgtggcaa
      301 agttgttcca gatgaacacc tct
//
LOCUS       KCHQ01000314             416 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 34402cha ultra-conserved
            element locus uce-714, sequence.
ACCESSION   KCHQ01000314
VERSION     KCHQ01000314.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 416)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34402cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>416
                     /note="ultra-conserved element locus uce-714"
BASE COUNT          117 a           90 c           82 g          127 t
ORIGIN      
        1 ccttttggaa aagccatttg gttttacaat gtatgatgga tctgattagt cattcaggcc
       61 gtcctctgct tttatgctta cattaagtaa cacaaagagc ccccctacag gttaaagttt
      121 aaatgtggat tagcagataa agcaactcct gattaggtta ctgcggggct tagaggaggg
      181 gaaaaaaatg gattttccct gcacattatt tcacaaacat cttcactctg ccttctttct
      241 ctccttctct tttcttctcc ggcttcatcc tctcacactc actcccagca tggatatcta
      301 ttttggcgca aaatctttga acaattatgc aaatgcatgt aaggcaatgc acaatacagt
      361 atggaaatgg cttggagaga aaatggactc attaaggaca gatggcatga gcgctg
//
LOCUS       KCHQ01000315             491 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 34497cha ultra-conserved
            element locus uce-717, sequence.
ACCESSION   KCHQ01000315
VERSION     KCHQ01000315.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34497cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-717"
BASE COUNT          123 a           98 c           96 g          174 t
ORIGIN      
        1 atctcgcctt ttctctcgct cagacattaa tcttgctcta cccttctaca tcaaaaatgc
       61 ttgtattgtc agggagcgct aatgtttgcc tcctattcac tatatataca catatatgta
      121 tttttgtgtc tgagggaatc agtcgaatgc attgttccca aatcattgta atatctattt
      181 agagtggcaa cagcactggc tgccgatgct cagtattcat ggagcataaa ccagccttaa
      241 gacttagaaa agctgaaagg gcttatccct atattcttaa actcccctct tttatgttgg
      301 tcttaggcat taaggatagg attgtgaata gcaattgttc aactgctgca ctgagagtga
      361 gtgtgtatac gtgggtgggg gtgttttatt ccctggcaaa atcctttcct tttctcccat
      421 ttttttcagc tgtaaatatt aactgtgttc ttaactctta acggtgtatg ggacagagta
      481 atgtgctttt a
//
LOCUS       KCHQ01000316             304 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 34587cha ultra-conserved
            element locus uce-1154, sequence.
ACCESSION   KCHQ01000316
VERSION     KCHQ01000316.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 304)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 304)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34587cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>304
                     /note="ultra-conserved element locus uce-1154"
BASE COUNT           73 a           69 c           92 g           70 t
ORIGIN      
        1 gaagccaggg tgaggtctca ggagtggggg ggtgggtgtg ttaaggtgat aaaaaccttt
       61 catgacatta gggtctgtga ggttccgcga gcagatcatt gagatcatag catggagcct
      121 atcttcctct tcctcgtcat cgtccagcga tggagcgcgg ctgcccgtgg tgtggtggta
      181 gtttatagtg actgcttgca ccagtgggac aacagaaaac acagttagaa gagtgccacc
      241 ccacaggcct tgggaagagc atcgtgggaa aagacacctc actacacccg tactttgtca
      301 tcac
//
LOCUS       KCHQ01000317             262 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 34679cha ultra-conserved
            element locus uce-1152, sequence.
ACCESSION   KCHQ01000317
VERSION     KCHQ01000317.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 262)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 262)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34679cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>262
                     /note="ultra-conserved element locus uce-1152"
BASE COUNT           58 a           75 c           67 g           62 t
ORIGIN      
        1 aatattaagc aatgcactga ctatctttca tgtagtaaca gttacactga ttctcttttg
       61 ctgtcatgtc agcccacctt gaaaaatcct ttgcagccct cgcaggttct cactccataa
      121 tgctgacagg ctgcgttgtc cccacatacc gcacacagac cctcgtttga cggagatcct
      181 cgggacgggg gcgatggcac ttggctgtcc accagctggt gcccgtggcc gagctgcagg
      241 gagtgaggaa aggccaggcc ag
//
LOCUS       KCHQ01000318             360 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 34776cha ultra-conserved
            element locus uce-1018, sequence.
ACCESSION   KCHQ01000318
VERSION     KCHQ01000318.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 360)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 360)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34776cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>360
                     /note="ultra-conserved element locus uce-1018"
BASE COUNT           84 a           98 c           82 g           96 t
ORIGIN      
        1 tttttttggg aaacttaatg tgccagtgtc tatactcatt actcttcata cctcaaaaca
       61 agaaaaggaa aatctagtgc cattttattt gtcattcttt ttgaaagaag tttatctatt
      121 agtacttatc catcggagac atgcattcgc atgtggtcat tgaagtgctc catttggtcg
      181 aacttggcag ggcagacgga gcacacgtag gtggtccctt cttggcagct cgcctctgcg
      241 gctacaccca ctcctgttcc aaccccagcc cctactccag cacctccgct cactggcatg
      301 gcgagggcca ccactccagc tccaggctca gggacagcca tggggatggg gatggagacc
//
LOCUS       KCHQ01000319             599 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 34871cha ultra-conserved
            element locus uce-712, sequence.
ACCESSION   KCHQ01000319
VERSION     KCHQ01000319.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34871cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-712"
BASE COUNT          175 a          116 c          129 g          179 t
ORIGIN      
        1 tgaggacaca atgggctttc caaaacaata agtggcacga ggaacagatg tgaaaattca
       61 tagagacttg atagttgcac ttctgctaca gaatgcagtt cattaaagac acatatatga
      121 gtgggcactg taaaaggtaa atggtaaggc tcttaaagta gtcagggatg accctcaaaa
      181 catgtgtgtg aaagtaaggt tgttaataaa tagtataata cttgaaaatg agggttttct
      241 cttgctagta atatgtgcat tggcacttaa agccaataca gtttaacaaa gctatggatg
      301 gcgcttcagg gatgctgaag gccatttttg ctctgtccca tccttaccag ctgtatttgt
      361 tctcttcaat aaattcaaag tagccccttc catgttcctc ccggcgtctc ttaacaccct
      421 tcttattctt ctgatcagca ttcgtgtctt tgtccgcatc ccctttgaaa atagaacaaa
      481 gatatagaat gaggtgctcc tttttatgtg agagagaggt cggactggca gtggggttct
      541 ggcccacaaa gcccgttcat tagttacatt gtgtcgacca taatcatcaa tattaaggt
//
LOCUS       KCHQ01000320             642 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 34937cha ultra-conserved
            element locus uce-1014, sequence.
ACCESSION   KCHQ01000320
VERSION     KCHQ01000320.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="34937cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-1014"
BASE COUNT          204 a          128 c          110 g          200 t
ORIGIN      
        1 tttctgcata gtctcagagc tgagtgggct gttaaaaata aggcaaaaca ctgccatcta
       61 tggctatgtt cctaggactg ctgaggtcct atgcacccag cacaaaggca atcaactatt
      121 cctaggaaaa aaaatgtatg gcttgatatt tgtaaataag attaataaaa tataattgta
      181 atcataaaat tgtaaacaca tgcctgacaa ttcgcaatct agtaaagtaa aaaagtgctt
      241 tggaccagtg ctcccaccaa agtttcttgc attgctcaca aagctgacac gtttttggct
      301 tccaaaattg acagattaga ctgaaaccta gattttcatc caaatgggca tctggtggcc
      361 atatccttta agcaacacaa ttctgcacaa atcaggggtt ctgtcagagc ttttcgtacc
      421 acctgctgtg tatcttcccc tcaaaatgat tgagcctgcc tttattgttt catcataatt
      481 ttatctttac agtttgttgg ccaaaacgca acacacattg cacattttgt acttaaatgg
      541 gcaatataat gatgctgcaa gcatcatata ctgtatgctg gtataactta ctgtatatct
      601 tatggcagat acttcatatc agataaattt atattggcaa ta
//
LOCUS       KCHQ01000321             543 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 35019cha ultra-conserved
            element locus uce-1015, sequence.
ACCESSION   KCHQ01000321
VERSION     KCHQ01000321.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35019cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-1015"
BASE COUNT          153 a          114 c          121 g          155 t
ORIGIN      
        1 aacaacatta gatatagggg aggggtgggg cagaacagaa taaagttgaa ctctttacac
       61 tcatgttggt cttgtcgctg ctggccgagg acacactcca tcttttggca gctttggcat
      121 caacaggtgg agattgtcta tccttgtctg cactgtgaat cttcctgttc aggtcctgaa
      181 acatgtcctg gtggcgtttc cgggtgtgca taattttcta cacaggaaca ttgcacgtta
      241 cgtataaggt aaacagcaca ggctcccatc aatcctactt tacccccttc acatttaatg
      301 tctcgaatct caacactaca gtcacaccca agctttgaat aaatctgata aatgtatgca
      361 aacatctaga ggtctgaata ggtaactaag agacatttca gccttttggt ctaagtctaa
      421 aaagctctgt aggaatcaaa gagactaaaa ttacctcaaa gtcaagctct gcatagcgtg
      481 attttcgtct ctggggggag atgagacagg gagattaaag atgtgtcttg atattgtgtg
      541 cct
//
LOCUS       KCHQ01000322             703 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 35116cha ultra-conserved
            element locus uce-719, sequence.
ACCESSION   KCHQ01000322
VERSION     KCHQ01000322.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35116cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-719"
BASE COUNT          213 a          158 c          135 g          197 t
ORIGIN      
        1 aaataattca gagagggcat aattaagtgt ttaatgctgg gttgtagttc aaaggaacaa
       61 caaagaaatt ttaattcaaa ttagaaatgt aaaagagacg cagattgttc agagatgaga
      121 actttgtgtt gagtcacttg atttggtctc tctcctccat caaacagtcg ggcagcgctc
      181 ttggagatct ccagagataa caatgtcaca ttgtcacata gggttctgct acaaatcctt
      241 aattacaaaa agaggatcag atgactacag catccaatac cggggtctcc aggcggcatg
      301 ggggtctttg atcaagaaaa tccaattatt tgtgtatata catttcccac atagtgatta
      361 cttcattaat tgtcccgcct ttatctcctc ccttcccatc ccccctaata atcagctcct
      421 ttatccagac caacaaacac accataggag ctttgtggat tcaaaggatt tgctttcccc
      481 tctcaaagag ccgctattct ttgatgattg ggcagcggca aacttcaaag taataaatct
      541 tatttctgac tggctggcgg cccaccaaag tccttatcaa attctaagaa gtgatccctc
      601 actctccaga tagaccaagg atatctcgca gagaggaagc actgaggagt ggagacctgc
      661 tcgacgcaat attttcccgc gaatgcacat atttatctaa att
//
LOCUS       KCHQ01000323             244 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 35206cha ultra-conserved
            element locus uce-718, sequence.
ACCESSION   KCHQ01000323
VERSION     KCHQ01000323.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 244)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 244)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35206cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>244
                     /note="ultra-conserved element locus uce-718"
BASE COUNT           64 a           42 c           60 g           78 t
ORIGIN      
        1 ttatttattg tatatttaaa ggcaactaac actgggaagt gtaataaaat gtacagtggg
       61 gggattagga gcagctcttt aatctcacgc ttctgataat actgcatggg ctgattgatt
      121 agtttttcag gaagcttatg tcagaaaaac ctaatccgtc tttggattgt gccagccttg
      181 taaggttttc cgcgctgcca ctttatcatg gcggcgaatt acagagctgc tgggctgtga
      241 taag
//
LOCUS       KCHQ01000324             413 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 35294cha ultra-conserved
            element locus uce-1159, sequence.
ACCESSION   KCHQ01000324
VERSION     KCHQ01000324.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 413)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 413)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35294cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>413
                     /note="ultra-conserved element locus uce-1159"
BASE COUNT           77 a          122 c          129 g           85 t
ORIGIN      
        1 ctcacttcag cggtaactga gctgcaggtt tcggcccgtc ggggtcttcc cgcctacctt
       61 gaacttggcg gtcatctggc tgatgagcgg gatgaactcc tgcaggtctt tggcctcgca
      121 gtccttcagc atgtgctcgg aggcggcggg gatgaagggc agcacctcct cctccaggca
      181 gatgatcatt cggtgcagga aggagcgcac ggagctgcgc agcacccccc gctggacggg
      241 gcagctcagc gcgggcagga aggtctgcat gcagtccctg tagacctccg tgcagccgca
      301 ctgcttcacc gtctgcttgt tgctgaacgc tttgctggtg cgactgagag cagagagatg
      361 aagacgtcag ctgtcccgca ttacatcgtt aacagcagct gacacttaaa cag
//
LOCUS       KCHQ01000325             284 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 35361cha ultra-conserved
            element locus uce-1158, sequence.
ACCESSION   KCHQ01000325
VERSION     KCHQ01000325.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 284)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 284)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35361cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>284
                     /note="ultra-conserved element locus uce-1158"
BASE COUNT          110 a           54 c           55 g           65 t
ORIGIN      
        1 tagactattc tgtattcact ggtgcagata aataaacaag gcatggagaa gagggggggc
       61 atacagaacg cacagtacaa tggcaagcag gtcagtaatt agaaactctg tttgcacagt
      121 aataatttta atatattcat caggaaacag agcatgccta gcatgataaa atcccatcaa
      181 ggaacatatc ccgactgcct taacctttta aacaggctgc cagcacattg ctgagaacct
      241 gaaagaacta aataaataaa taaatgcata catacacaga agtt
//
LOCUS       KCHQ01000326             334 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 35451cha ultra-conserved
            element locus uce-499, sequence.
ACCESSION   KCHQ01000326
VERSION     KCHQ01000326.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 334)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35451cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>334
                     /note="ultra-conserved element locus uce-499"
BASE COUNT           90 a          101 c           60 g           83 t
ORIGIN      
        1 tacaagtcag aaagccataa aaaatcttta tctcagtgaa acacagcaat ttgggagata
       61 atcgaatggt gactgggggg cacaaacgcc agtctgagga attataccac aatctcccct
      121 gcatttacaa ccttcctcaa agccagttgt caccctggaa ggaaagcccc cgactgaaga
      181 ttcattacat ctttaagcca gcacggtggc atggcagcct catccccaga tgcaacacaa
      241 cagcacactc ctcccacagc tggtgatgct accgctaaag ctgcagcttc cttctctctt
      301 ttccacttgg ttctcttttc tctcctctcc ctct
//
LOCUS       KCHQ01000327             453 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 35546cha ultra-conserved
            element locus uce-496, sequence.
ACCESSION   KCHQ01000327
VERSION     KCHQ01000327.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35546cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-496"
BASE COUNT          169 a           94 c          107 g           83 t
ORIGIN      
        1 cgccatggca acacatagaa agaggaagaa aagagttacc cataagtagc cgccgtttca
       61 cccgcttgtc cacatcagct actgacgtgg cattgaactc agagctctca attgcagcct
      121 catctttctc taaaacacaa gtgacaaggg gacaaacagt gagcagcagg ttaatgagaa
      181 gcccaaatga ccagaccttc agcccctctt ggcgtttgag caaaaaacca aagccaagaa
      241 gcaagaagcg atgaagaagc gccaaaatcc ctgttagagt gttaatcccc aaacaaatga
      301 taaatccccc agagcaaaca aaagaacaaa acaaaataaa tgaaaatgat cagtatcagt
      361 gtgtagctta caaaatgaag cggtaggtag gcaagtaggt aggtagggaa ggggagggga
      421 ggaagttgag ggcttacata tgaaaaaagt ttt
//
LOCUS       KCHQ01000328             358 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 35637cha ultra-conserved
            element locus uce-497, sequence.
ACCESSION   KCHQ01000328
VERSION     KCHQ01000328.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35637cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-497"
BASE COUNT          115 a           69 c           62 g          112 t
ORIGIN      
        1 atttatcata ctatttacct gtaatgttac aatacatgca aatcatgaaa ccggatactt
       61 tccccttatg aaattatgac aaaccattca atttgaacaa caaatcggct ccaactactt
      121 tggtggtgcc ttatcaggag gagagcagca cagaaagagt gctgcacaga aaacattttt
      181 ctttctttgc caggaaaaat gaactgtcaa catttaatga tagatatttg cattgtgata
      241 caaatcgtgt ccttggccct aaacataaga tatagatcca tttataatga attcagataa
      301 agtgtccttt ttgcattctt gctctaatgg atttgtggag ccagcgtcag tgaccctg
//
LOCUS       KCHQ01000329             732 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 35732cha ultra-conserved
            element locus uce-494, sequence.
ACCESSION   KCHQ01000329
VERSION     KCHQ01000329.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 732)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35732cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>732
                     /note="ultra-conserved element locus uce-494"
BASE COUNT          209 a          143 c          157 g          223 t
ORIGIN      
        1 gaacatacat gtaatggaaa gtgtgaaaga ggccacggag ctattacagt acacaatatg
       61 agtcattcag tgaaactgtt agttggagca gttaatcact tgacataaat agccttaaga
      121 gtaacaattt agctgtcgaa ttttacatgt aaagtcaatc acattcgttc ccactgaaca
      181 tactgcctgt actgtagtag aaagctgttt agcggggatg ttgcgctgta tgagggtgat
      241 aggagtaatc aagaagggga gggggcttct ccataggaag ttcctgcaaa cagagtgcac
      301 ccacttttta aaccccattt gtcttgttaa tgctcccctc tgattacctg attgcactgg
      361 atgactgtgg agaaatctga ttgcgtaaaa ttatatagag caaacttttg attggggagg
      421 gatctggcga gcttgctgcc accattgaca ggctttgtga aatttggcct cgctgatttg
      481 aaatcagcta agtgtcacgt cccgtaattg taatcagaac ttaatttttt ttatccctgt
      541 tctctttcac agcacaactt ttctcacgca aacttttaaa gcttgaacaa tactgcagcc
      601 atgttctaca tacaatgaca aaaaatacac tcatccgtct ttaaggggac gtttcattga
      661 gacgtgcttt aattcatcat gggtcaatgg acactcgttc cattctgtgt gtgcctgtaa
      721 tgaattcatt ag
//
LOCUS       KCHQ01000330             681 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 35921cha ultra-conserved
            element locus uce-492, sequence.
ACCESSION   KCHQ01000330
VERSION     KCHQ01000330.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 681)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="35921cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>681
                     /note="ultra-conserved element locus uce-492"
BASE COUNT          203 a          150 c          161 g          167 t
ORIGIN      
        1 gaatccatta atgcaataag tgcatttctt gtttcattag aaaataacag cttaaaaatg
       61 gcttaaggct aaatctgcca tatgcaaaaa aagcaatgag aagagacagc tctgctttaa
      121 gcagatggtt gctcgctgca actaacagct ggattcatgt ttcctgttca tgcagacatt
      181 gtttgacatc gtgattatta aacaggccca ttgctgcgct gttcctcctg tgcgttagtc
      241 tggtattggt atgcaggggc ggccgcgaga ggaggaggag tggacggtgt gatgagagga
      301 tagtcttgga tgtgatgaga ggctgagggc agtcagtcag tctggacgtt tggcacagag
      361 acagcagatt ccatttccat gccaatctgc cttgtctctt tctgaatcag acttgacctt
      421 cacaggctga tgactccaga ggcctgggac cgggagacgc tttctgcctt aaaccagata
      481 cacacacact gagatatgta acagcacgaa gcatgcacaa tgggaaaaac attcccctca
      541 gtacactcgc aactatattt gcacacacgc acatgcagcc ataagtacac acgcagacac
      601 acacgcacaa aagcttaaac catcggaaaa aaagtctctc ccttgattta ctgtaaagga
      661 gtgatacaaa ggattgaaat g
//
LOCUS       KCHQ01000331             318 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 36016cha ultra-conserved
            element locus uce-493, sequence.
ACCESSION   KCHQ01000331
VERSION     KCHQ01000331.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 318)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 318)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36016cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>318
                     /note="ultra-conserved element locus uce-493"
BASE COUNT           95 a           53 c           57 g          113 t
ORIGIN      
        1 ctttagtggt atacagaaaa aaaaatgctt gaagtattca tgggattttt aaccattcta
       61 aatctgtgtc ctaaaccgat tagttgacac caatttttct ttgatgtatt agctgagggc
      121 ttttgccact tggaagccaa ttgaaattca aaacagtttt cgctccaaat gctttgggga
      181 gatctgctgc aaataatgga tgtaatttat ttttgacctt gcattttttt ttcttgaaga
      241 ggggcttatt aaatgattaa acatatgtgc actatgctgc ttgactaaac aactggcatc
      301 ctatacagct aatacatc
//
LOCUS       KCHQ01000332             386 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 36113cha ultra-conserved
            element locus uce-490, sequence.
ACCESSION   KCHQ01000332
VERSION     KCHQ01000332.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36113cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-490"
BASE COUNT          110 a           96 c           80 g          100 t
ORIGIN      
        1 caaacagcaa tcaatagacc aaagcggtca actcaacaaa ccgtcaccct actaaaacat
       61 caaacccccg gcccaagcgt cagatgatag gctacactca gcttatccat taccatcaga
      121 taaagaggag ataaaacaca gagcctaatc ctttcatgtg tcgtgacagc cacagcagcc
      181 tccaaggcat tccttcagtc tggctctcaa atagttttat ggcggaaggc agccattcag
      241 tcagccagcc agccagtcag ggctgttctg gtctgtttgt cttatttcac agtttacacg
      301 ctgttttata ggtagttatt atggtcacca tggtgatgcc atacgttttt atggtctttt
      361 ggtctgaggg cagagagtgt aataaa
//
LOCUS       KCHQ01000333            1116 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 36161cha ultra-conserved
            element locus uce-491, sequence.
ACCESSION   KCHQ01000333
VERSION     KCHQ01000333.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 1116)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1116)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36161cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>1116
                     /note="ultra-conserved element locus uce-491"
BASE COUNT          306 a          235 c          245 g          330 t
ORIGIN      
        1 ctacggtatg cgagaggtct atgtctcttg acatctgcta tgcagttgtc actggtaact
       61 taaatcccca ttgatcagac agcgagagtg aatttgtgtt gctgtttttt ttctaactcc
      121 cactttgcga acaaacccat tttcacacgg ggcacacgca tatacctgac agttacaccc
      181 aaacaagcct tgctgtttac tcgagaacaa acacatagac gccaaccagc aaatctattc
      241 tcaatacaca catcacccca gacgtaaaga gattcaattt tcgcctaccg ggagtgtttc
      301 cattttttta cgcaacaatt tttttctttc tctcctgtgt caagacagct gcctttgatg
      361 ttagcatcta atatacaggg ctaaaaaact atagtttgct gtgagctgac agataaaaca
      421 gtgcaagacg ccattaccct gcaaagcgga ataatgagga gacctgaaca cacagaagac
      481 aggagcccag ttgaattacc gtggtctctc atccaaggtg ggagcttttt gacagctttc
      541 caggcagcac aacacattac catactgacg ctgctctgta gtgccaaaga aaagctttga
      601 tgaaaacata actgggaaac tgggaaatct ttatatgtgt gtgagcgcgt ttgtgtgcgt
      661 gcgcgcgcgt gtccctgtat gcgcttgtgt gtgcacgtgc atgtcgcgcg catgtgtgtg
      721 tgggtcctcg ctgagtgtgt ttgtgcatgt ctgtaagtgc ctgtgtgtgt gtgtgtgtgt
      781 gttacaacaa agacaggaaa acaatgggaa accaagcagt gtcaagctgc aactttatgt
      841 tctctaatta ctaagtggat actgtattct tgagagtgct cctattggct gagatacaag
      901 ggcttatttt ttgatttata ttcatgttga tgattcagtt gaattatcaa agtaccaaat
      961 ccaactgaca atatgcctaa aagaaattct tcaagtggag agtaacgctg ccaaatatat
     1021 tctgccattt cattaatgtg gttagctagt tagttatcca tattctaaca gagtaggctt
     1081 gatgttagat ctttggcaag gacaccctgt actgag
//
LOCUS       KCHQ01000334            1039 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 36239cha ultra-conserved
            element locus uce-140, sequence.
ACCESSION   KCHQ01000334
VERSION     KCHQ01000334.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36239cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>1039
                     /note="ultra-conserved element locus uce-140"
BASE COUNT          301 a          215 c          226 g          297 t
ORIGIN      
        1 caatgaatgg tacctgcagc taacatgaca gatttctcct cgaaaagctt gaatccaaca
       61 tcagccccgt ttttactgtg cctaagatac catcataaat gtttcagaac cagcagtaca
      121 atatggaaac aaaaaaggat aaatactcaa ctccctgcaa tggggataaa gccccaaaat
      181 atgttttgga aacataatca gcatcatagc agctctgtgt gtctgtttac attgtggcct
      241 ctaccatcgc tcccctctcc tccaacaaac aagaggacgg ggggatggag gagaggaata
      301 ataaaaaaaa aagcaagaaa tatcttttgc atattatttt aagtaactgt tcaaatttca
      361 tttcagaatg gtaatccaca aaacaaatat gtagcggcat attttaaaaa gggaggctcc
      421 gctcgcttca atttcctatt gtggcgttcg gcgtgtgttt gctctttgtg tctgtttgaa
      481 ttgatttgca cagctcggca gacaagggct gaatgctcag accaagaatc cataatttca
      541 tatgatctga tagttctgca gtattagatt gattttttcc cctctccctc tctccctctc
      601 tttggtgttt atgttaacaa acaagctgag gtacctgtgc tcatggaacc agagagcaaa
      661 gagaggcatt ttgttcagtc taaggtgata atgtggagac ggggacatgt ttgtttgagg
      721 aaggggatat gtttgttatg tgttgttttc tgaggaggta cttcccatcc agcctattta
      781 gctggcaggc tgtggtgtct gtagccacac aatatccagg actagaggca tcacagttgc
      841 ttatctacac ctggttaggc ctgcacgtaa cgcccatact gctaacacct catgggcaca
      901 actgcagcag tcttaatgcc tcacagcaga tgaatagatc agatattagt tgtgatggaa
      961 aataaggcat cagcccatga tactgtaggt ctgttacatt ggctgagagg aaacataagc
     1021 aaagtactgt ctttcctgg
//
LOCUS       KCHQ01000335             443 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 36488cha ultra-conserved
            element locus uce-917, sequence.
ACCESSION   KCHQ01000335
VERSION     KCHQ01000335.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36488cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-917"
BASE COUNT          131 a          111 c           86 g          115 t
ORIGIN      
        1 ggatgtgatt tatcattccg gacaaatctg cgcctgaacc tccctcctcc tgacagctct
       61 atcgtggcaa gaatgtccca aaatgtcacc tgttgtacgc tgagtgacct tctaattttc
      121 taattcaatt tggagaactc ccctccccac gactcaccca tatcatgaac cagtaataac
      181 aattacacac cgtgactggc tccaaaacct gcaattcccc cactttaaat caaaccccaa
      241 gtagtctttt attaggctgc ccggttaaat caatctaaat ctaagcataa taactctcta
      301 atcaggtgct ggggagaata ataggttgtc acgctcgagg aaaaataggc aatcatggaa
      361 tgttttcttt aattaggccg gctaaagtag aagggcacgg cgtgagcgcg ggacacattc
      421 atcatagcca aggtgggaaa tta
//
LOCUS       KCHQ01000336             271 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 36589cha ultra-conserved
            element locus uce-916, sequence.
ACCESSION   KCHQ01000336
VERSION     KCHQ01000336.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 271)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 271)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36589cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>271
                     /note="ultra-conserved element locus uce-916"
BASE COUNT           73 a           46 c           85 g           67 t
ORIGIN      
        1 cctccaacaa tattttagta ggttaattgc gaaatttttg aattgtacat ctgagttgtt
       61 aattaggcat gacagaggtg gtgaaatagt tatcttcagg cggtggcagc cagcagaggc
      121 tgcttgggat gcaaaaagga aggattgatt gaaattagtt tgcagcagta ggagcgtggc
      181 tggtggagac tcagcgttcc tccgtctgtg gctgaatgtg aaggagtgac gctgaagcag
      241 ggagggagac gccatgaccc cccgcagaaa g
//
LOCUS       KCHQ01000337             453 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 36719cha ultra-conserved
            element locus uce-914, sequence.
ACCESSION   KCHQ01000337
VERSION     KCHQ01000337.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36719cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-914"
BASE COUNT          136 a           94 c           70 g          153 t
ORIGIN      
        1 accttcattc actttttttt tttttttccc atgcatgata atagaatcaa atgtattatg
       61 tattactaat cacatgataa aagcctgtgg tgctactaaa gcatgtagat tccaaaatgc
      121 tgtgcatgta caagaaaagt cattgccttt ttaacagtgg cctgagggaa tggaattgtc
      181 ccttagcctc cataaccatt gacacaaaag gtccccaaac aatttcaaat tactgcttta
      241 tttctctctc ttatataatc cacccacatt attaaatcta ccaccttctg ggactttact
      301 gatacaataa tattacagtg ctaagatgtt tacattcgag agcgccagct ttccttgtta
      361 taaacatgta tgccctcagg acttgtacaa tacgtatgca tactacttgg cctaaatgag
      421 gcacaggtca ttttgttttt aagaggggtc aat
//
LOCUS       KCHQ01000338             528 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 36786cha ultra-conserved
            element locus uce-913, sequence.
ACCESSION   KCHQ01000338
VERSION     KCHQ01000338.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 528)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 528)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36786cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>528
                     /note="ultra-conserved element locus uce-913"
BASE COUNT          183 a          108 c           95 g          142 t
ORIGIN      
        1 ccagggaaaa tggtctcagg cattgaaaaa aaattcccca atattttcca gatgtgttca
       61 tgtaagtaat ttttttcata ccacaatgta agacacataa atactcgaag catatttgct
      121 gaaaaagttg taatactcta ataccagtgt aatactcgtt aacttaccac caggcttact
      181 gaagccacct ctgtctccag cgctgctatg ggggaataaa tggagatatg aaggcgaatt
      241 cccttttact gccacttcca tggctcgagc aaagtggctt gattgaggga gtaatcaaaa
      301 cattccaact agcccaacag caaccaaaaa ctccccaaaa ttataaatac acaatctaat
      361 ggaggggata agagtattag ctatgtgcca ttccttaact agctgagtac aacttcagtg
      421 acagtttgca gcagtggata catttgtgca aaatatgaat gactaacata ttttcactgt
      481 ctctgaaaat gtgacaaaac ccaaacattt gtacacaggt agaaagat
//
LOCUS       KCHQ01000339             323 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 36836cha ultra-conserved
            element locus uce-912, sequence.
ACCESSION   KCHQ01000339
VERSION     KCHQ01000339.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36836cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-912"
BASE COUNT           94 a           46 c          100 g           83 t
ORIGIN      
        1 acatgtccga ctctgtccga gaggggcaag caagcaattc ggttcattag tggtgaaaag
       61 aaggagagga tggagggaga gaggggaggg tgcgaggaag agagatgtgt gctatatcct
      121 gagcaatcta tctagctggt gctgagggtt aatagctgct gccaaagata agtgaattat
      181 aagctgttgc tttcacctct acacaatcta ttgccaaatt gcccagtcac aaaatgaggg
      241 tgtggatgta ttactttttt ttattattga agagaaatcc aagtttcaat ttatgaaaaa
      301 ttcaaggggg gggggggggg ggg
//
LOCUS       KCHQ01000340             384 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 36996cha ultra-conserved
            element locus uce-910, sequence.
ACCESSION   KCHQ01000340
VERSION     KCHQ01000340.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="36996cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>384
                     /note="ultra-conserved element locus uce-910"
BASE COUNT           78 a          133 c           83 g           90 t
ORIGIN      
        1 agggagagaa aagttgagcc acagaacaac gctgctgcga gcagctgtgg cactcccaga
       61 tttccccctg attgctttca gctggtactt gaaccctggg ccttttgggt tttggaggcc
      121 agcccagacc ccacaatccc cccagcgccc catccagctg cctgacccct ccctgacccc
      181 gtgccgagga taggaaaata cgagccgtgc caagccagag agactctttt attttgcctg
      241 ctggcatgct gccggtgacc agggcttaca taatgggaaa catagcagga cccaggagaa
      301 agcagcccct gccccccttt ctctttttcc tcaccaatcg atcctcccct ttctccccca
      361 tctcctttct cctcttcttc attt
//
LOCUS       KCHQ01000341             553 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 37092cha ultra-conserved
            element locus uce-1093, sequence.
ACCESSION   KCHQ01000341
VERSION     KCHQ01000341.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 553)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37092cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>553
                     /note="ultra-conserved element locus uce-1093"
BASE COUNT          133 a          162 c          105 g          153 t
ORIGIN      
        1 tgtgtgtgtg tgtgtgtttg tgtgtgtgtg tttgctgtga ttggacccat tcctccgact
       61 gctatctaaa ataaccaagt ggttaacgac aacatgatgc cagggagccc ccccccaccc
      121 ccaccccaac ttacacacac atcacacgcg tctccacaca tacacattaa acaatagtct
      181 aattacaaca tttataactc ccccatgcct cctgcgtctc tccaaccccc aacccacaaa
      241 tctgtgaatc tggaattgaa tttagcccaa gttgagggct gcgctggcat gaaaagacta
      301 tttgattaga acggcagttg tttcatttgt ggtgcagcag attgcagagc ctctctatcc
      361 ggtgtgcaat ctgtattcat tactcggtgt aaaaggatga tccatgtcct gacaccaggc
      421 tcatcatttc atgcagatgc acagcagctc cacgaggccc tttccgagcc accataccat
      481 gcctccccct gaaaccgcag caatctttcc tgtcgtcttt tgctgtttcc tcagtcctca
      541 atgctagtat ctt
//
LOCUS       KCHQ01000342             493 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 37193cha ultra-conserved
            element locus uce-143, sequence.
ACCESSION   KCHQ01000342
VERSION     KCHQ01000342.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37193cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-143"
BASE COUNT          134 a          116 c          110 g          133 t
ORIGIN      
        1 catcatttgt ctctgcgacc attcctttga ccaaacgaag cattaattca aatcataaat
       61 ctgagctgat ttaaatccga ggagagtgag ggagagagag aggcccctgt ctgactgcct
      121 gcccctaatg atttattttc tacatttctg cgagcgagag atttgtccat actcactgac
      181 aggtcacctt caaacgccag tggcagactg ttcatcacca tgcagacgag catctcatcg
      241 ctgcgagtaa atattaaagg aaaagaatcc aattgattgt ggatggggcc gagaggcgtc
      301 actgccatat atttcactca gagagctaat gctgtggcac atgcacccac acctagagct
      361 gctccccctt gccagaatta tgattctact gggagcctgt gtggctggct gtgggctcaa
      421 ggttacaatt taaattgtaa aaagataaaa cagtttctta ttagctccac tgccatagcc
      481 ttgctgttgg tac
//
LOCUS       KCHQ01000343             643 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 37389cha ultra-conserved
            element locus uce-1112, sequence.
ACCESSION   KCHQ01000343
VERSION     KCHQ01000343.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37389cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-1112"
BASE COUNT          188 a          147 c          123 g          185 t
ORIGIN      
        1 taacaagacc aaacacaaga ccttgagcca attgaaagca agcagaatac aaacgcagca
       61 gcaacttaat ccctttcagg cgaacacacg ggcctcaaaa gtatcaattg taattgtttc
      121 ttcacgtcat taattgctct catcattgtt tactctcttg gactgaaaac acacagagga
      181 ggaattgact aaatcagcac agaatcagga catatttgca taaacaggat gcagcgatca
      241 agtttgtcaa acattaaaag gctttaatgt ggttattatc tgactctgag gtgtcacggt
      301 gtaaatttct gtttcttctg tggcgcagaa gctctcaaca cagtgcattt atctgcaata
      361 ttgcccttcc gccacttcag atctccccat tccctggtgg tctaatttat gttaagtcac
      421 aaacctcccc tatggctgtt ttgaaatgtt cagaatggag actgtgtgct ccaggtttat
      481 gccagcacca caatcccctg tataattgtt ctctatggga aagcacatct cagtgaaacc
      541 atctgcaagt ccatggggca gtttcctaag aatgagtgga cttcttaggg ggttccactg
      601 caatccagtt tctcttgtga agcaagtaat taattcaaat ctc
//
LOCUS       KCHQ01000344             242 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 37478cha ultra-conserved
            element locus uce-1076, sequence.
ACCESSION   KCHQ01000344
VERSION     KCHQ01000344.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 242)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 242)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37478cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>242
                     /note="ultra-conserved element locus uce-1076"
BASE COUNT           63 a           79 c           33 g           67 t
ORIGIN      
        1 ccaagtcctc tttaccacag ctttcctctt ttcatattgt ccttaaactc tctttcctgg
       61 tctgtacgtt cttgttgaaa agagctcctc tccttattcc gtcagacacc ttactacaac
      121 caaacaccac cttgataaaa ccaaccagat gccacagagg ccaaagagca ttctccaagt
      181 atgtgacctc actgcccagc tagacctgca gtctacctct cagtctgcat gacagactca
      241 ca
//
LOCUS       KCHQ01000345             877 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 37665cha ultra-conserved
            element locus uce-661, sequence.
ACCESSION   KCHQ01000345
VERSION     KCHQ01000345.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 877)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37665cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>877
                     /note="ultra-conserved element locus uce-661"
BASE COUNT          233 a          173 c          187 g          284 t
ORIGIN      
        1 gaaaggaatt gcaacaacat atatgggaag attattgctg tagtcattaa ttgttgcttg
       61 aaaggggatt aggattagca gtcctataga acactctaac acctggcctt cctcatatct
      121 aacaatgtga cttcagtttt ccttatttca gtatcagttc aagttggcaa aataaaaaag
      181 gctgatttat tcaaatgaat catcaacgct ggaaatgatt caatatgtgc cacattcaga
      241 tgggtgatat attattccct tggggagagg caaagatgga gctgtggagc tgtttcattt
      301 gtgctgtctt tatcagtgtg tcaggcagag aggctgagct tgttctctat gaatggacga
      361 gcccttgaac cataaacctg tacctcctct gataacagtt tttgcattgt gatataagtg
      421 ccattctctg tgatgtcctc tctgacagcg ctaaatatat caacatacac aaaatgatct
      481 gtcagacgaa tcattttatt tcaaccagtt ctccaaaact aaggattttc agtgctgcat
      541 gcgcagtgtg tgtttttaaa gacatattgt ggattttgta aaggattcaa agcaaagcac
      601 agtattgtgg ctgcatttca ccaagctttg ctattcatgc tcttaatgtt ttgcccgtag
      661 ctgaacattt ttactgtacc tcttttttgt cctccatacc atgtgctgta tttcgtttaa
      721 tgctatttct gctgctggga cctctgactg ctctgacgtc tgagattgcc acatcttcta
      781 aggtgataag aatgctccct gaattactca gagcccgtgt gatgacatgg ccctgattgt
      841 cagacgggtg ggctggtgac actggaacac agacggt
//
LOCUS       KCHQ01000346             644 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 37849cha ultra-conserved
            element locus uce-663, sequence.
ACCESSION   KCHQ01000346
VERSION     KCHQ01000346.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37849cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>644
                     /note="ultra-conserved element locus uce-663"
BASE COUNT          161 a          120 c          171 g          192 t
ORIGIN      
        1 cttagaaaag tgcagatggg taaaaaaaat aaataaaaca ctcacaacct gctgtgtcct
       61 ccatgtgcat ggtgtgtatt ttcatgcgcg ttgccaggtt ctgcgtactg tatgcatttt
      121 gttgtttcct cccgtccagg tcgccagcca tggggaacct cattaaggtc cttggcaagg
      181 atttagagaa ctgtccacat tttttcctgg actttgaaag taagtgagca ccggggtgtg
      241 tgcacgtgtc tgtgtgcttg aagtgtgaga gcacatgtgt gcagcagagg tgttgagtgg
      301 gaggtcgctg ggcggggtca ggggaggtat atttggatgc gagctgctga gctgttgatg
      361 gtgtgatgga gtggtgttgt gggtgtggtt tgtcattatc agatgctctc tagtcccact
      421 ctcagggctt tctgatgctc ctctgtgcaa cgatggtata aatatatgct gcgtaggaat
      481 atataaaacg gtgcataggt aattacggtc aagcaaacaa gctttcagag aagagttcat
      541 ttaaaaaaca ctttcctcaa acaaattccc aagaggaagg tgactgattc acatacatac
      601 tgtatattct agcttttata cagcatatcc agctttgact ctat
//
LOCUS       KCHQ01000347             327 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 37937cha ultra-conserved
            element locus uce-665, sequence.
ACCESSION   KCHQ01000347
VERSION     KCHQ01000347.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 327)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 327)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="37937cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>327
                     /note="ultra-conserved element locus uce-665"
BASE COUNT           68 a           88 c           70 g          101 t
ORIGIN      
        1 ctacctattt gcaggcgttt aaagcacaat gctctgtgct ataaggctaa ctggtgttag
       61 ctgtcacact aactgtgcat ggtgcatcca ctcatctaat tcagcatgtt gacacctggg
      121 ggggggcact gttttgatgt tttttatttt atttttttac tgatgtcttt ctcctcttgt
      181 ctctgcagga ctcatctctc ctggagtgtc tgtccctgtc caagtcccag ggagcgagcc
      241 tgacatgtct cagtactggt caagactaca gtagagagaa gagctacttc accctgtaac
      301 cacccactcc accatcgccc tccggca
//
LOCUS       KCHQ01000348             221 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 38030cha ultra-conserved
            element locus uce-664, sequence.
ACCESSION   KCHQ01000348
VERSION     KCHQ01000348.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 221)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 221)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38030cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>221
                     /note="ultra-conserved element locus uce-664"
BASE COUNT           50 a           52 c           42 g           77 t
ORIGIN      
        1 gaaaaattgg aggctgataa atatctctgt ctgtgtctgt ctctctcttc ttctctccct
       61 ctgtgctgct aagcgtatta caacactccc tggttcagcc ctctctcatt accatattct
      121 aattacattc gttaagggga gcatttggga gtttaatgaa taaatttgaa agatgggtct
      181 ccgtggcgat ctttaggttt gtctcctcct caaccaactg a
//
LOCUS       KCHQ01000349             362 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 38124cha ultra-conserved
            element locus uce-667, sequence.
ACCESSION   KCHQ01000349
VERSION     KCHQ01000349.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 362)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 362)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38124cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>362
                     /note="ultra-conserved element locus uce-667"
BASE COUNT          112 a           65 c           74 g          111 t
ORIGIN      
        1 atagtaatta aggaaatgga atgattttat tggccatgat gtttatatta agttccagat
       61 gttaagcagc tgcttgcgca gcaagaggcc ctgcccccca tgtgctatct agaggaactc
      121 ttattaagat caagataaca gccccagtta aatgtatgtc tgtgtgtaca aacaacatag
      181 tatctcattc acagcgtgta gcaaactgaa ctaataccat gtccggtttg attaatggga
      241 cacggttatg aagcaccatg agggctaccc tgtatttata aatatgtccc aaaagtgcaa
      301 tttatttgca gatataatgt tactctattt caggtctgat ttggctgact ggaaaagtta
      361 at
//
LOCUS       KCHQ01000350             531 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 38310cha ultra-conserved
            element locus uce-669, sequence.
ACCESSION   KCHQ01000350
VERSION     KCHQ01000350.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38310cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-669"
BASE COUNT          146 a           83 c          137 g          165 t
ORIGIN      
        1 caaacaaaaa aaaataaagc ttcaactttc tttaattatg tttacccaac aggctttgct
       61 tcctcattta aatagcataa acatctggcc atggcgcgcc actagcatga cggcagtagt
      121 caagcaaatc ttgtggaaaa taatgaaatt agatccccgg tgctgtgaca gtggaagggc
      181 agaagacatc cgctccatgt taataaaatt gccatgaatg agtgaataca attaggaaat
      241 tgtcagtggt ggcagtgaac ttttgtaact caccgatgtt tgcatcattc gattaaggca
      301 ccaatttgga attattattt gcggctgttg tggcttttat taattgtgac ccggcagtga
      361 ttggcctgcg attaaaccag tcacatatga tgtggctgag ggtgagggat ggattggtgg
      421 gcaggctgat ggaggacatt tttttattgt tgtttatctc tgtgagtgca gagtgaggaa
      481 gatggaactt tgtgtgtgtg tctgtgtgtg tgtatagtga atgtgtgtat g
//
LOCUS       KCHQ01000351             244 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 38596cha ultra-conserved
            element locus uce-990, sequence.
ACCESSION   KCHQ01000351
VERSION     KCHQ01000351.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 244)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 244)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38596cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>244
                     /note="ultra-conserved element locus uce-990"
BASE COUNT           58 a           68 c           60 g           58 t
ORIGIN      
        1 ctgaactttg gctttttctt ccttcccagg cattaagcct ttccagtgtg accgctgtgg
       61 gaaaaagttc acacgggcct actccctaaa gatgcatcgg ctgaagcacg aaggtaaacg
      121 ctgtttccgg tgccagattt gtagcgccac attcacgtcc ttcggtgaat ataagcacca
      181 catgagggtc tcccgacaca taatccgcaa gccgcggatt tacgagtgca aaacgtgcgg
      241 ggcc
//
LOCUS       KCHQ01000352             430 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 38706cha ultra-conserved
            element locus uce-147, sequence.
ACCESSION   KCHQ01000352
VERSION     KCHQ01000352.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 430)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 430)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38706cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>430
                     /note="ultra-conserved element locus uce-147"
BASE COUNT          100 a          101 c          120 g          109 t
ORIGIN      
        1 ctgccatttc gttctcccct gccttgtcca accatcatgt tgagttaagg caagcattat
       61 gctgggaaga ctatttgttt aggtgaggag cagccgcaga gctaatatga gcacaatttg
      121 ctcagcaggt cacaggcgca gagtggagga agtaaatgag gcagttctgc cccctcgggt
      181 gcagcccctg cctcatacat cactggatgt tttattcaat acagccagga aggctctatg
      241 gcaggtgccc tgactgtggg ggcgcctgcc ctgctgtagg ggcccatatt acattcagcg
      301 agctgcctgt ctgcagggct gctggagaga gaatgactgg agccagcgag gaagataaat
      361 tttgaggatg cttgtagtct tatgataaaa cattctgtgt gcagcttttt cactgcacag
      421 tcagcatgac
//
LOCUS       KCHQ01000353             777 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 38794cha ultra-conserved
            element locus uce-919, sequence.
ACCESSION   KCHQ01000353
VERSION     KCHQ01000353.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 777)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38794cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>777
                     /note="ultra-conserved element locus uce-919"
BASE COUNT          195 a          172 c          142 g          268 t
ORIGIN      
        1 cttagttagg agctgcatat ttttcacagc accctgaaat aagattcttg gtcaacatac
       61 tacataaagt gggaaatgcc ttcatttctc aagtctgctt ttgtgccatt tctccctctt
      121 ctaaatggcc atggttacat ctgctgaaat gaaaagatac ctacatactg ctttcattcc
      181 tttttctccc ccctctctcc ctctctctct aaggctatag catctgctat tgggagacta
      241 aataacagaa atatgcagga attgcacact aattcccttt agagatagat cttggctggt
      301 gccctgtcat aaatcagaga atttcgatat gaaatgaggc aagctgctct aatcatttct
      361 gcatttcaaa ttggatcact ggctcaatcg cttggctttt aaactgcttg cctaagagca
      421 aatgtgaggt gggagataat tcagctgaaa tctctgcctg ctctgtgcgg cagttagttt
      481 actgcttgag tgcaagagaa tgcttttttc ttcccttagc ccatctttct cttttcaact
      541 ttgttaaatt gacttttcat tttaaaatcg attaaattga gagagtcact gctgttcccg
      601 gaatctttaa agggacaccc atcactgtgc gcatgtgcct ttatttggct gctgctatca
      661 tggcggcgct atggggaata aatattttct catttaaatc accttttatc ctgctgactg
      721 gactgtaagc atcaaagttc atgtgctgca ttagctatta cttattttgc tccattg
//
LOCUS       KCHQ01000354             476 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 38844cha ultra-conserved
            element locus uce-308, sequence.
ACCESSION   KCHQ01000354
VERSION     KCHQ01000354.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38844cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-308"
BASE COUNT          161 a           73 c          136 g          106 t
ORIGIN      
        1 gcaggaatta atcatgatca taaaagccaa agacaaaaca acatactcag gccattgcta
       61 aattgttgtg atctaatgca aaacaaattc atttttcatg ccattaaaga taaagaaaat
      121 cttaaaaggt ttggttttgc ttgtctgcgt ctcttattga gagtcattca ctttcaactt
      181 tatttgcgga ttattgcaaa tccccggtac aaatcatatc atgaaatcat gtagctggga
      241 cattggatgt gttctgctaa tgctcaagga agatcccctg agggagccat tgagtggggg
      301 agaaggggaa agaaagagag aggaagggga gaggcagaaa gagggagaga aagcaaaaga
      361 gaggcggaga gggagactta caggatgggg aagggaggga agggcgggaa agaaagacag
      421 agaggagggg agggcggcag cagtcaagct gcactttatc ctgacagatc tccttt
//
LOCUS       KCHQ01000355             369 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 38926cha ultra-conserved
            element locus uce-588, sequence.
ACCESSION   KCHQ01000355
VERSION     KCHQ01000355.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 369)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 369)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="38926cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>369
                     /note="ultra-conserved element locus uce-588"
BASE COUNT           65 a          149 c           52 g          103 t
ORIGIN      
        1 gaatccaacc ttcagctgtt ctggatcatt cccatccctc catcttccct acacgcactc
       61 tcatctttcc aacctcctcc tcctcctcct cctctcctct catgctctcc atccctcatg
      121 cctgttaaag gcttgtcctg cagggcctgg atgcacttgt gtggtacaac aacagagaaa
      181 ccgcccaaag ctcttaacag ctcttcctct ccacttcctc cctccctcca tctccactgc
      241 taccaccacc accagctcct ctctccctct ccactctgct ctgtctttcc cagctgcacc
      301 ggcgagctgt tccgtatgaa ctgctgccag ctgaaagcct gctactcctg tgagattgct
      361 attactcag
//
LOCUS       KCHQ01000356             715 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39017cha ultra-conserved
            element locus uce-598, sequence.
ACCESSION   KCHQ01000356
VERSION     KCHQ01000356.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39017cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-598"
BASE COUNT          243 a          132 c          152 g          188 t
ORIGIN      
        1 aaacaaaaac atacggaaat tcatctcaac ccttttggtt taaaaccacc ccaacttacc
       61 aacacaggcg gtttcagttt gttttattgc aaaaacacaa caggcaatag cattttaaaa
      121 ctgagatgat ttacatggta atgtctacag tttaataaac atgacttcta accacattta
      181 atgtagatac agggctggaa tgaccatatg tataattacc tcactaaaaa taaagcattt
      241 acaagaaaaa ggaaaaaaaa aagaaaaaaa agaaagagga cgtgttcgcc gggtaatctg
      301 ccatctatgt gaaacacttt gaaaccaagg aaatttaaga tcttcatcaa ggcgtctgca
      361 tccaaacatt taacaaagga ttttgtttcg acaatgtagc atttacttta tgtccacttc
      421 acattactgg ccctgtgcaa aagaaataca tagaagatac attgcatgtt aacagcagaa
      481 acagtggact cagcttccca aaattaaagt ttaaaacctg tgtggaggga agtgttttgg
      541 ttaagtttgt gaagctgctg cgctcactgg aaccctgtaa accctgagga ctgaaggcgg
      601 ttagagcaca gaacaattga gtattcagtg gatgtggagg gcagattcta atcgggggtg
      661 tacctgaggg gcttgtggtg ctgcacccat cgtctggggg ttggctgtgc cgtag
//
LOCUS       KCHQ01000357             489 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39114cha ultra-conserved
            element locus uce-309, sequence.
ACCESSION   KCHQ01000357
VERSION     KCHQ01000357.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39114cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-309"
BASE COUNT          131 a          119 c          109 g          130 t
ORIGIN      
        1 aaagcaaata aataaataaa tagaaggcag gcagagggaa attatcgctt ttcacattct
       61 ggcttgtgca agtgcagttg aaaacaatgc agctgttgta tgggactgaa tgctgatggg
      121 tggataatat ttttttttag gtgtgatgag acaaaggaac aaaggatgcc ttagaggaga
      181 ggttgcctat atgcctggaa acctcttcaa agcacaccgc caaatggatc taacgcctcc
      241 ccctgccacc tctagatcat gatacttggc tgaagctatt ccgctatctt tatgatccct
      301 cctccatcta tggcgaacta tagccatgca ggggaccaca ccatcttgca gaatgtctct
      361 cctctcgcca cgttcctcaa actgacctct ctgggtttca tcattggagt cggtgtggtt
      421 ggaaacctcc tgatctccat cctgctggtt aaagacaaga gcctgcacag agcgccctac
      481 tacttcctg
//
LOCUS       KCHQ01000358             495 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39210cha ultra-conserved
            element locus uce-533, sequence.
ACCESSION   KCHQ01000358
VERSION     KCHQ01000358.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 495)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 495)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39210cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>495
                     /note="ultra-conserved element locus uce-533"
BASE COUNT          161 a           91 c           94 g          149 t
ORIGIN      
        1 ctcaatctca ataacagcat tccattatat ggcagacgac agccgtgccg agtgtgcatc
       61 ttccatgcag ccacgcattt agggtattat caaattgata gtgactcaaa ttgatttgga
      121 taatgaaggt cgctgcacct tgaaatataa tggccactta ttgtaattac catcacaatt
      181 atcaaggtca ccgcatcaaa aacaaagggg ctgacattgt gaccacagca atggagcctg
      241 atgagccttt attatttagc ctggtgatgt tgttaaatat tatttataaa ggcggagaaa
      301 aggtcaactt ttatatgatt tagtttggtg ttttacatct tagtaatttg tgtctgaata
      361 gtacactttt tagtgacaga tatgaagaag agatgccact caaatggact ttttgtgtgc
      421 agatttccta aacaaacctg tcaattagcc aagaggtcac taatatccat gtcagacatc
      481 aaacactaca aaaaa
//
LOCUS       KCHQ01000359             373 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39306cha ultra-conserved
            element locus uce-618, sequence.
ACCESSION   KCHQ01000359
VERSION     KCHQ01000359.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 373)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39306cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>373
                     /note="ultra-conserved element locus uce-618"
BASE COUNT           95 a           77 c           68 g          133 t
ORIGIN      
        1 tacatataaa ttgaacacgc agtatcacgc acctccttaa actcatctgt ttcacgactg
       61 tatcccatta tctgccttgc atacttcaac aagcatttaa tttcgccttt catattgtct
      121 tatgtttcat tatgtttcag tgttatttat taaaattcat ttagctaata acgcccacac
      181 gcgctgcccc ttttcctgca atacacctat tctaatgtgt tctgagcgac tgtgtgtcct
      241 gaggtaaaat gggaaatgtt gaaaattcac tggaatatga aaagcaatca tattttctgt
      301 atcagtaagc aggtttgtgg tagctggggg tcattcttgc tctctgctgt tgcttgggga
      361 ggcattttgt aag
//
LOCUS       KCHQ01000360             470 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39407cha ultra-conserved
            element locus uce-521, sequence.
ACCESSION   KCHQ01000360
VERSION     KCHQ01000360.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 470)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39407cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>470
                     /note="ultra-conserved element locus uce-521"
BASE COUNT          117 a          111 c          109 g          133 t
ORIGIN      
        1 tgcattcata ttcacccacc attcatcccg attcatgcca taatacaatt ggacaggtgg
       61 attgataatc taatatggct tagttttttt ttatcctatt cctctcactt ttcaaatagt
      121 ttacttggag cctgagggtg tgagccatcc tgttttctat ggccgccgaa ttacctcaga
      181 gcatgcagtg cctagctcgc tgccagagag ggaggcgagt attgttttca tgacagagat
      241 caatgggtgg gtgaatgtgc tttaattctg caggagctcc tctcccaggc taataaatgc
      301 aagcctccct gctgactggg ctgtcgtgct gagcccagcg ggggtcagcc tttttgtgtt
      361 cctgtgccca aattatggaa ccatcaatac gctccctgga accagtcaat agaagctcgc
      421 tttgtggccg aggggagacc aacttcaagg ctaatcaaaa agaaaaaaaa
//
LOCUS       KCHQ01000361             205 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39502cha ultra-conserved
            element locus uce-619, sequence.
ACCESSION   KCHQ01000361
VERSION     KCHQ01000361.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 205)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 205)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39502cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>205
                     /note="ultra-conserved element locus uce-619"
BASE COUNT           66 a           36 c           47 g           56 t
ORIGIN      
        1 ttttgtgtga gtgtttggaa acacgggcag attttaagca cacaaacatg aaaaatatca
       61 atttcacatt tggtttaacg ctttcacact ttgtgtcact gacacccaga gaggagggct
      121 gtggaagaca aaacacagct cctggataag gatcatgtta atgcctatca attaggatca
      181 aaaagggatt aactggcatg gttgc
//
LOCUS       KCHQ01000362             382 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39693cha ultra-conserved
            element locus uce-976, sequence.
ACCESSION   KCHQ01000362
VERSION     KCHQ01000362.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 382)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39693cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>382
                     /note="ultra-conserved element locus uce-976"
BASE COUNT           93 a           86 c           94 g          109 t
ORIGIN      
        1 ctctcaggat gtatcattgc tgagacacaa aaagcaaaga gcattagagg gcctgtctgc
       61 tctacactac tctgttctgg tctgttgtgt tgcgttatgg tgctagcctg gcttctagcc
      121 ctagcgtgag tgctctctcc actccaccat tgttccattt gatagcacta agtgactgat
      181 ttaggttcaa tgcctgcatg gagcagacag gccagctgtg ggttaagcag atagcattca
      241 agtgagctaa cccaattcaa acccaatcaa gccgggattt attgttgggg tctgtattta
      301 gaaatctgat agagtctgca tcagtccctt gacttgcatc aggagagacg ggccttattt
      361 cttagcggag gactataaac gg
//
LOCUS       KCHQ01000363             531 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39791cha ultra-conserved
            element locus uce-999, sequence.
ACCESSION   KCHQ01000363
VERSION     KCHQ01000363.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39791cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-999"
BASE COUNT          150 a          143 c          111 g          127 t
ORIGIN      
        1 cactacatat ttttcacagg aaagaatacc atagtaatag aaacagccaa ctcctcgcta
       61 ccactggccc agtcgtcctg ttttaggggc ggctttaaag catgtcacaa gacctcatgc
      121 atagtaaaca gtgcggcctc catggctgac tggtgagcaa tttgcctcgt agattgcctg
      181 gccccggggc cttggagcta tgtttatgta tgagccctcc tgtttcatat gtatcggccc
      241 ccggatcatt ttctacaccc cccttcccgt tttctccctt gcagaactga tggcatacac
      301 atacagacac aagcacacat aaaaacacgc acaggacaat gtgcacagaa acacacacac
      361 acacacacgc atatggacag acacataacg taaacattaa gagtgatgac ctgcacaagg
      421 ggcgacactg tcccagtaga ttacactatt gtcaatacaa atagaaattt actatacatg
      481 tgtcgcagct gctgctgctt accgtggcag ttgtgccttg cagggtgagt g
//
LOCUS       KCHQ01000364             390 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39884cha ultra-conserved
            element locus uce-1070, sequence.
ACCESSION   KCHQ01000364
VERSION     KCHQ01000364.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39884cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-1070"
BASE COUNT           85 a          112 c           71 g          122 t
ORIGIN      
        1 ctctccagca gtcaagtgtg tgtgtatctg tttgtctgcg tgtctttgtg tgcatgtgcg
       61 agatctcatt tctgtatcgt ttcggtggtc tgatgcgtgc gtgggactca agcccacagc
      121 ggagagtcaa tctgagacat ctattatgca cttcatcaat ctttttggac tcttgacatt
      181 tcactagctg aacaaattgt cagttatcaa aactcaattt cagaaatgac atgtcgaaat
      241 tcacctcccc ccaacccctc cccctctctt gctcactctt cctctctccc tctctctgcg
      301 tgtacctctt tgcatatacc tcttgtcatc acggagaatt ttccccaaca actgcacgtg
      361 aatacacaca cgggcataat cgcgcacatg
//
LOCUS       KCHQ01000365             547 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39922cha ultra-conserved
            element locus uce-635, sequence.
ACCESSION   KCHQ01000365
VERSION     KCHQ01000365.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39922cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-635"
BASE COUNT          128 a          194 c          114 g          111 t
ORIGIN      
        1 ggctgcagca gaacagactg tgggaacagc cggttagcct cctctggtcc cctgctcccc
       61 aaccagaggg gcagccatca atccagctcc ccctgcccct gcgcacacaa atgcccaacc
      121 aaacacacac tcacacaaaa agcctacaac gctcacaccc tctcccaata atcctcggaa
      181 gcaatttcat ctcgactcgg gtggcggccc attgtcgcca gccccttcaa tctttcctta
      241 ttaactctcg ctttgtcctg catccgagct tctggactca tctctcctac attccgatcg
      301 gtgcagctcc cagcactccc aggcaacctc cattcgctaa tcccactgcc tcccccaaca
      361 gccgccccac cccaaggaac tcttactgct tttttttctc caacctgccg atcacctact
      421 tacagagtaa ggtaggggca ttaactccat gggttttctg aaggcagagc gtgaaggcgg
      481 ggtgggtgaa ggaggaggcg gccacaaagt gactccagcc cagacaatta gaacaatgag
      541 ccgggcc
//
LOCUS       KCHQ01000366             400 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39932cha ultra-conserved
            element locus uce-685, sequence.
ACCESSION   KCHQ01000366
VERSION     KCHQ01000366.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39932cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>400
                     /note="ultra-conserved element locus uce-685"
BASE COUNT           89 a          114 c           94 g          103 t
ORIGIN      
        1 atgtttattt gtgtgtctgc acatgcctct ccagcgattc tctctgctcc actcacccag
       61 ctgctggctg gaggagtgat tcatgggcct gacagatgcc tggtgcagct ggatctgtcc
      121 ttgatcatcc caaaagcctg gacagcactg tcattcacca ttgcccaaat tatctctgta
      181 ttgactgcag aaccctctgt gacagcgccg taatggctaa ttacccagga tgctttgggt
      241 acttttaaac cccagagtgt tctcttgctg tcttgccatg cggctgctgc tgctgctgct
      301 accgcgtgtc gctgtgaggg ccaccgtttt ctcaagcccc acctgagcac cacagcctaa
      361 ggaaccgaga gcaaaacgct gagaaaaaaa aaaggcataa
//
LOCUS       KCHQ01000367             240 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 39995cha ultra-conserved
            element locus uce-278, sequence.
ACCESSION   KCHQ01000367
VERSION     KCHQ01000367.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 240)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 240)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="39995cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>240
                     /note="ultra-conserved element locus uce-278"
BASE COUNT           69 a           39 c           78 g           54 t
ORIGIN      
        1 tttgttttgg gaataattct ccagagcgga gaaagataag ttttaatttg tgacgtgatg
       61 gcacccctga agcaacgaga gcacagaagc agactgacag agatctgact cacggccagt
      121 agtgggagga gcagtagcag cagtagtgct tgtaggagag gaaagggcat tggacaagga
      181 cacgtgacta ggactagaaa cattggttac atcctgggtc tggctggtgg tggatgattg
//
LOCUS       KCHQ01000368             531 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 40043cha ultra-conserved
            element locus uce-1145, sequence.
ACCESSION   KCHQ01000368
VERSION     KCHQ01000368.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 531)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40043cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>531
                     /note="ultra-conserved element locus uce-1145"
BASE COUNT          170 a          101 c          117 g          143 t
ORIGIN      
        1 aaatgtgtgg aaaaaacaga atttaacata agtttaaaaa aactttctat ttcatttttc
       61 attaatgttt tgcaaatcaa acaaattacc acaacagaaa atagctaaaa tattccaaca
      121 cagatgtaac ctgctcgctg acatactgaa ttttgtctac acttgtgttc atatcctgta
      181 tctcggtcag gtacctaaag aaggggggag gaagaaaagg agaattgagc agtggctgta
      241 gtaataaatc acaggatcgc tggtgacatt catacaatac ggatacagtg ttaactcaat
      301 gagtcggaca gccctagcct gttcctccat cctgaccttg cctccctgtc gtaatcaatc
      361 atgttggcac ggcacacacg ctccttattt attattactc tggacccgca tgtacagtaa
      421 acaatgagta gaatacattg gaaagactga gagagtgggg tgctattata agagaggagg
      481 taaaggtccg gtggaataac cggggggcat atgtgtccgg ctggctggtt a
//
LOCUS       KCHQ01000369             751 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 40323cha ultra-conserved
            element locus uce-566, sequence.
ACCESSION   KCHQ01000369
VERSION     KCHQ01000369.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 751)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40323cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>751
                     /note="ultra-conserved element locus uce-566"
BASE COUNT          221 a          139 c          157 g          234 t
ORIGIN      
        1 ctcagacata aagatgatta tctgttcttt agggacagta aaagatattg ctctttaagc
       61 tttcagcgtt tttgtaggaa aatacaagct tcatgtgttt ttttcctgtc atgagaaatg
      121 agatttgaca acccgtaggt ggcaaacagc ctaaaacatt gttaaacccg atggctgtat
      181 gtacagtgct cgtattgagt cgtactgata tgcatctaaa cacaaaggca gtaacagaac
      241 tctctgctct ctggccttcg agtcctctca ctacatcaat aaatacagca aaatagcatt
      301 agcaataact tcaactatat gaccaggctc taatatgata gaattagtat cagtgtttta
      361 aggtttggcc atttaggtga aattctaagc cgggcaggga gtaatttgga cacagggaaa
      421 attgattttg accatcagca ctttctcatt ttcaaacagc gcctgcagct aaatgggtta
      481 gcctgttaag cacattacac aggtagcttc tcctttcctc cccaatgatt atgtgtccgc
      541 cttgagcaat tgatatttct tgcaaataag aaaattatca tattctatga ctggaaagag
      601 aaattagggc ctgctgcttt agagtctcag gactgaaaga gggagagcga ggaatatttt
      661 tcttttcttt tgttgttttt aagggtgggg tgtatgtatc aaatgtccta agctatattg
      721 gaatcggggc gctgtcaggc ctcatcaata a
//
LOCUS       KCHQ01000370             229 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 40419cha ultra-conserved
            element locus uce-567, sequence.
ACCESSION   KCHQ01000370
VERSION     KCHQ01000370.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 229)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 229)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40419cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>229
                     /note="ultra-conserved element locus uce-567"
BASE COUNT           70 a           42 c           53 g           64 t
ORIGIN      
        1 tcctctgatt actttgaact gtcaaaaaat ggcagaatca aatcgaaagt gctcgaggtt
       61 aggggagtga tttgttcaag aagagatcgc tagagcaatt gacacagctc ttgagacaat
      121 aattgggtta tcaaagagaa aacagttcaa gtaccacggg ggtgaaagct tatttgcatt
      181 ggattttcat acggagagac acacctcttc cttactgccg ctgcttttt
//
LOCUS       KCHQ01000371             774 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 40516cha ultra-conserved
            element locus uce-564, sequence.
ACCESSION   KCHQ01000371
VERSION     KCHQ01000371.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 774)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40516cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>774
                     /note="ultra-conserved element locus uce-564"
BASE COUNT          259 a          157 c          144 g          214 t
ORIGIN      
        1 tataagtgtg aattttagat aagggcttca gaatacaagt attgcagcag aactataaat
       61 ccccaaagga ataaaagaat attctggccg attaaacccg ataagatcac agcagactca
      121 ctaatgccac actagaagtt tctgcgagaa taatatagtt ttacttaaag aaaagtcaaa
      181 ctagaaagag aagaatttct atgttaaagc tcactttcct ctttctcatc acgcctcaac
      241 agtatgtcga atttctactc aagtcttaac ttgatttttt gtttcttttc tttcctttct
      301 tttttttttt tttttacccc atctctctct gcagccctga gctctcatcc tgctccagga
      361 ggaatagacg gaatctgatt acagacctat tttacagcag acgccggggc gcaataaagg
      421 gagagagagc acggaaacgg gactcggccc atcaattaga tctctattag cagccaatgc
      481 agacctcacc tcaggaaacg ccggggccct gaaattaaac aattcttcaa gcccgacaag
      541 ccagtcaact ctgctatatg tctgagcaag gaggagggag gaggggtgtc cttaccagaa
      601 agaactatcc cacaatatct gttataaaat cattagaaat aaacagtatg gaccatatgg
      661 gctggtttaa aagaaaggag acataaaaac ctaaacctca gcagaaggca aagactataa
      721 gcagtatttc aatagtgtat gataataata tgttattttg atataattat agat
//
LOCUS       KCHQ01000372             493 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 40614cha ultra-conserved
            element locus uce-565, sequence.
ACCESSION   KCHQ01000372
VERSION     KCHQ01000372.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40614cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-565"
BASE COUNT          153 a          131 c          103 g          106 t
ORIGIN      
        1 ttctatggct caagtgagcc aacaccaggc gggccatgcc tcatggccag cgacggtggt
       61 ggtggtggtg gtaaccatga cgatgcggcc attggcagct acaacacctc atacacatct
      121 tcatttgtgt tcacctaccc agagggagcc tgcggggtca gtgccaacca gcggaacagc
      181 agtagcgagc agtcatctga ttccctgaac tcaccttcac tgctagcact ctgactgacc
      241 gacagacaca cgcgcacaca taccaacaca aacacacatg ctcgctggaa gtagaggctg
      301 aggcaagtac atgcacagta cctatcagtc tcacagtttg gaaaaaaaaa caaaaacaaa
      361 acaacaacaa ccaatcatct gttcctgatt ggcttaaagt ttacacattc cgaaatgcat
      421 cccaattaag agccatacaa atagttgcac attgtattag atctaacctt tatgttgagc
      481 ttaaacagta aat
//
LOCUS       KCHQ01000373             320 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 40712cha ultra-conserved
            element locus uce-449, sequence.
ACCESSION   KCHQ01000373
VERSION     KCHQ01000373.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 320)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 320)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40712cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>320
                     /note="ultra-conserved element locus uce-449"
BASE COUNT           97 a           84 c           58 g           81 t
ORIGIN      
        1 gccctgcgac aggctgcctt caccgggctc cagcattctt tcaccgtctc cagcggcagc
       61 tctgacagaa ggaagctcgg agaaaaaccg gcttcagctt cacatgtaaa acacgcagca
      121 gtttcacaaa tcttttaatg atttgtgacc cctttgtgga cagcgaaatt gtgaaatcat
      181 gcacccataa cttctcactt aatctgtatt actctcatca caacagagca agccactcta
      241 tcagtaaatg ctaatctcct aattaacaag ctaattaggc aattacagct ttgcagaagg
      301 atgcctaaat gaaatatgac
//
LOCUS       KCHQ01000374             321 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 40804cha ultra-conserved
            element locus uce-563, sequence.
ACCESSION   KCHQ01000374
VERSION     KCHQ01000374.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 321)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 321)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40804cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>321
                     /note="ultra-conserved element locus uce-563"
BASE COUNT           92 a           81 c           57 g           91 t
ORIGIN      
        1 aactttaata agttccagag tcctgggctc caggttgctg ctcccaaggt gctggtctga
       61 gttagctaac atttatcaca taaacatcta acaccactcc tgctaaagca gacaaatgcc
      121 ttcctgctct gcaatccctt ccgtagccat cagaatcagg gcaacaaatc cagctttaat
      181 agttatctat ggagtccctc gcatgcaatg aacacccaca tttatttctc tgctttctcc
      241 cgatgagggt aagtggatca attagtgaag actacaagtt cagcatcttt acacatagta
      301 tcaattgtta agttgagcaa c
//
LOCUS       KCHQ01000375             477 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 40907cha ultra-conserved
            element locus uce-560, sequence.
ACCESSION   KCHQ01000375
VERSION     KCHQ01000375.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 477)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="40907cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>477
                     /note="ultra-conserved element locus uce-560"
BASE COUNT          132 a          100 c          148 g           97 t
ORIGIN      
        1 ctaattcagt gcagaggaca attatcatgt aaaaaagcaa ccgagtgaca catcgcaggc
       61 cgaggtagca tcactccttt ctgaagaaga caaactggta gattgaaggt ctcttgaatc
      121 cgggctgtcg ctgggggtag gggagctctt gtaatttgcg gaactgaatc catggagcgg
      181 gcataaggga ataagttgga aggggaagaa gacagagaac aaacctggca ggcacgttga
      241 ggccatgcca gtcctgcctg cgccacgcgg tgtggcaggg gggcagtgcc aggaaatgtg
      301 gcaagaggag gaaagatcaa acaacaaggg ctgcagatct ccaccaatct gctctgtatt
      361 aatgtcagag ccaaggagca gctgaaccag acgtgatcca caatgtgtga cagcgatgcg
      421 cgtgtgtgtg tatgtccgtg tgtgtgtgtg tctatatgac cattcgccgc aaactgg
//
LOCUS       KCHQ01000376             319 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 41006cha ultra-conserved
            element locus uce-561, sequence.
ACCESSION   KCHQ01000376
VERSION     KCHQ01000376.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 319)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 319)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41006cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>319
                     /note="ultra-conserved element locus uce-561"
BASE COUNT           89 a           79 c           71 g           80 t
ORIGIN      
        1 tggaatattc atggaggatc tgtgaggaaa agattaatgt attagaaatt aaaatggggc
       61 ccggacgtat gatcttgctc taacacttgg ccagacctgt gtcacccgcc gctagcgcct
      121 gaagtcggca catgccgctg ccaaggtgga gaggaatcat taagcaccct gccattgtgt
      181 gagcagaata atcaaacttc acccccccat tctttcccgc agcactgaca atgaataatt
      241 ctggagccat ttgcaatgtt aacggcacct atctgggcca tccatgcctt tatgataaga
      301 gctccaaata tgcatttca
//
LOCUS       KCHQ01000377             711 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 41103cha ultra-conserved
            element locus uce-444, sequence.
ACCESSION   KCHQ01000377
VERSION     KCHQ01000377.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 711)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41103cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>711
                     /note="ultra-conserved element locus uce-444"
BASE COUNT          199 a          145 c          155 g          212 t
ORIGIN      
        1 cagacctact ttacagtcat aaggaaaaaa gcggacgtct ccagtgtttt cattttcttc
       61 tgggaggagg cgtaagatca taatacctat tttcataata atacaagcag cctgtaggct
      121 acaaaataag aagaaagcca taccctgtgt atctctgcat tgcctgtcag agacagaggg
      181 gtttcaatct ctttttcatt tcatcctgat agctctgcct tttattacag agggacagga
      241 acgtttcctg aggtaaaagg agtgcacatt cccaagataa agttggaggt ttacagctat
      301 ttccagccgt aatgtattat tccgttaaag caatgatcag gtagtgttgg atgaatggga
      361 gatgttcagc accattactg cctggcacat cagtgaggca ttattacatt atcgctgctc
      421 tttagtagga gattgggtgt gtgaccgggt tctgaataca ctcatcccgc tctccacggc
      481 gtaaattgca gattggctca ttgacttcaa tgataaaatg taaaaattgc cagtaaagag
      541 aacatagact caggttactc cttagctgtt tgtcaacggc agatgtgact cagttggtgc
      601 agagcatgtt aaagagttcc atctcccaga agtcaatgtc atttatgcct gaaactgcta
      661 aagcaatagc tcatcttgtc tctggtgtgt catactacac tgcctttgtc t
//
LOCUS       KCHQ01000378             418 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 41201cha ultra-conserved
            element locus uce-447, sequence.
ACCESSION   KCHQ01000378
VERSION     KCHQ01000378.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41201cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-447"
BASE COUNT           99 a          104 c           87 g          128 t
ORIGIN      
        1 tgagaaaagt tttgcccctt gatttatgcc tctttcccgg ctgggatatg aatctgggat
       61 gatgctccag agagcagcac tccagataat gttagcccat ttaaaaagag cagatttgtg
      121 tagtctatca gggtcgccga gtattttttt ttctcctcct ccccctcctc cagcccctcc
      181 gtagtgagaa attggttgtt atcatagatc acagatactg ctcaaacctc ttatgaaaga
      241 tgaattaatt tcactaatgc tttaatgcaa agctctcatg agggaggcag actggtgata
      301 acccctgcct cgtccccgct tcctccgctg gtgatttatg ccctctttta gtagatgaaa
      361 ccgcctagat ttgccatcca tctgcagctt tgaggaatcc tattacacgg ggatcttg
//
LOCUS       KCHQ01000379             480 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 41294cha ultra-conserved
            element locus uce-446, sequence.
ACCESSION   KCHQ01000379
VERSION     KCHQ01000379.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41294cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-446"
BASE COUNT          166 a           98 c           60 g          156 t
ORIGIN      
        1 caatctgagt tatattgctc taaactttat gcaatatacc ctcagctgtc attgcttcca
       61 taatgcacat ttacatactg tctacacaaa catgcacaga tagcaacatg tacagtacac
      121 gcacaaactc cctcacacac acacttgcaa ataagaaatc tattgagagt atttctcctt
      181 gccaaggatt ttttttcctg agtcaaagat aatacaattc ctttttttct tatttcctta
      241 caatacatct ttcagttctg ccttttgcgt gcatgaaatt cattttctaa tggaaatatt
      301 tgttttgtaa atcaaatatg tattatgcac agaatgcaaa gcacaaatta aattatgtta
      361 atgaaatgaa agagatatga aatgcatatt tcatggacaa aacataaccc tgccaaacag
      421 ccatttcttg ataaaatctt taaacacaat ctcattcgga gaaagacata ttgccatggc
//
LOCUS       KCHQ01000380             241 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 41385cha ultra-conserved
            element locus uce-441, sequence.
ACCESSION   KCHQ01000380
VERSION     KCHQ01000380.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 241)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 241)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41385cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>241
                     /note="ultra-conserved element locus uce-441"
BASE COUNT           47 a           51 c           64 g           79 t
ORIGIN      
        1 agatagatgt ctgccatgcc aacatgttta ttttccttgc cgattagctt cgattaaaag
       61 cagaccatgt tgtctctcct cctatttgtg catttgtgtg tctgcctctg tgtgtgtatg
      121 taaaaggagt cctccgatcc tccctgtgcg ggtgtgtggg tgttcgtgtg agagtctccg
      181 ttatttcatc tccactaggc tgcacatgat aattaagcca tggggggctg ggagaaggaa
      241 g
//
LOCUS       KCHQ01000381             512 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 41464cha ultra-conserved
            element locus uce-443, sequence.
ACCESSION   KCHQ01000381
VERSION     KCHQ01000381.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41464cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-443"
BASE COUNT          150 a          120 c           96 g          146 t
ORIGIN      
        1 gtcgttcttt tatatgcaga aaagcgcagt gtcttatatg acatccatta acccagacac
       61 agagttactg tacttcagga cagaaactga ctttggcaga accagttgag tcactcttaa
      121 atcctctcaa aagtttccta accttgagag cccgtgcatc cccgaaaaag taataataat
      181 tctaacctga tcttcctact tattttatat ctcccctcag caacctaact tcttctcggc
      241 aacagtgcag ttattaattc atgaggcact aattagttct ttgtttaatt ttgtgttaaa
      301 cagactgacc ggaatgataa cgactcgcgc tgtagcgctt cggtcccatg ccactcctgt
      361 ttgctacaac aagggagcat cgtgcgacta gcatgatgaa cccaattccc ttctaagttg
      421 cacttcatta agtcaaaatg tgacaaggag cttagaggaa gaactggcag atctgatcat
      481 acataacaat gcaggcccag taagtttgag gg
//
LOCUS       KCHQ01000382             602 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 41558cha ultra-conserved
            element locus uce-442, sequence.
ACCESSION   KCHQ01000382
VERSION     KCHQ01000382.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 602)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41558cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>602
                     /note="ultra-conserved element locus uce-442"
BASE COUNT          171 a          143 c          124 g          164 t
ORIGIN      
        1 cttatgtctg ttcaaagtgc tctcaaagtt tctagaaaga gtggaattcc ctactgacgc
       61 aaaatagtca tatgtggtca gatcagctga tgtgcacaac ataatgggtt attctcacct
      121 gttgtcacaa aggacaaaat cataaatatg tggcgttgtt ttattcacgt atacaactta
      181 atataaagca aagtgtattt tcatgaatta tttctctaaa atgtcaatga ctattgtttg
      241 ctggtttagg agttttgctc cgccccctgt gtttgtcgta aacctggctc ctggctccaa
      301 taaacccggg ctaagagcgc cctgggctcg cctccttctc caaggcgatc aataggatct
      361 caggcgcact acaagcactc tcttacgtag acatccacca aggagagagc cgatacaaca
      421 acacggttga tctgctcaaa cacaaaaatc tacctgcttt ctgaatcatg tcgttgagcc
      481 caaagcatac aacgcctttt tcagtgacag atattttgag tccaatcgag gagacctaca
      541 agaagtttag tggcatggac ggcgcaggga acctaacctc tccactggga gcctaccgac
      601 ag
//
LOCUS       KCHQ01000383             342 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 41651cha ultra-conserved
            element locus uce-251, sequence.
ACCESSION   KCHQ01000383
VERSION     KCHQ01000383.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 342)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 342)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41651cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>342
                     /note="ultra-conserved element locus uce-251"
BASE COUNT          105 a           63 c           53 g          121 t
ORIGIN      
        1 cctagctttc atatgaacct ctattttgtc ccatagaata tggaatgatc ggagagcata
       61 cagtaaaaag tcagcggcca agatcagttc atgacacaaa ggccctgcag gagcaagctg
      121 aatctgctaa atttatggca caaactggta atacaatagt tatgtttctt tactttattt
      181 tgttaactaa acttaatttc atcatgcatg ctctctcttg tactgcacct tttaagtgga
      241 aatgttttgc attattattt tttccattct ctattgctac atatgaacta ggaagataaa
      301 tttcccattt ctctgagtat ttactttgaa tatagaacat aa
//
LOCUS       KCHQ01000384             311 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 41932cha ultra-conserved
            element locus uce-254, sequence.
ACCESSION   KCHQ01000384
VERSION     KCHQ01000384.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 311)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 311)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="41932cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>311
                     /note="ultra-conserved element locus uce-254"
BASE COUNT           77 a           86 c           48 g          100 t
ORIGIN      
        1 taatgcggtg tatcgctatc cgaaagacct gctcctatta caagccactc atctccaaca
       61 aactctccca tgactctttc tacctccata cttctatttc tatctgtctc tctaggtctc
      121 acctctctcc atttcatggc tgttttcttc ttctatttgc ttgacaagac aatggataat
      181 aaccctggaa tagcacagag accggcaaat gagagtaatc aagctgtctt gtcctggtgg
      241 cgttcaggtt cactcatcaa accctaatta tcaccctgga aaccaatgtt ccgctttaat
      301 tgttctgatg a
//
LOCUS       KCHQ01000385             291 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 42029cha ultra-conserved
            element locus uce-255, sequence.
ACCESSION   KCHQ01000385
VERSION     KCHQ01000385.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 291)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 291)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42029cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>291
                     /note="ultra-conserved element locus uce-255"
BASE COUNT           76 a           68 c           69 g           78 t
ORIGIN      
        1 cttacaaaag ccagacagga gagatcgtcc cggtcctaac tagaacggac ttgctgccct
       61 ctccacaagg acataaagtt tcattactga tgcacgcagt caaaggcaat ttagcaaaca
      121 cagtgtgcaa aagaaaacat cagcatattg caagtgttcc tgtattaggc ggaccttgca
      181 tgttgttttc caattttgat tcatttttgt gggggcaggg tgtgcgggtg atggattttt
      241 ttttctcccc cttcccagtg tcaccctgac ccaaagccaa ggggaggtag c
//
LOCUS       KCHQ01000386             728 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 42224cha ultra-conserved
            element locus uce-259, sequence.
ACCESSION   KCHQ01000386
VERSION     KCHQ01000386.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 728)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42224cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>728
                     /note="ultra-conserved element locus uce-259"
BASE COUNT          216 a          131 c          184 g          197 t
ORIGIN      
        1 aaacttgcat ttaaggaagg agaatagtga actagctatg ttgcacgacc ggttctgtat
       61 ttcaacatac agtagggcaa aatagtttgt ttttgagtgc agaggtagaa ggagtgaatg
      121 tgtaccaagg agagtaaagt aggtacaaag gagagaggaa taccatgtgt gcttgtgtgt
      181 ccatgcatat atgtgcatgt gtgtccttgt gtgtgcattg aaagatggtg gtgagagtgt
      241 tgtgtttcac agttttttgc catgatgcac tgctttatta ttctgcacaa ggggcacttc
      301 acatgcggaa tgggttctct ttgatatcga cagcagcttg agggagagag tgcactcaaa
      361 aacaggcgcg ggcgaattta ttctgggaaa aaaacagata gttgtgtact tccctggcag
      421 tggttgccgc acatgcgaag agccaaccgc tttgatgctc cagcagtgac actccacacg
      481 ctaatgaaat atggtaatta cagccacatg aaagccctcc tagacagagc tggagaaagg
      541 gtataaaaaa aaaaaacaac aaatatgact ttatccaaag atacctactg tgattaattc
      601 tcctgttcat aaacatatat tttctgctgt tcacttgcta caaagcagtg tgggccatca
      661 gttgacccag gaactggcga ggggggaaag gtctgctgat taagaaccct attgttccct
      721 ttcaatag
//
LOCUS       KCHQ01000387             392 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 42322cha ultra-conserved
            element locus uce-249, sequence.
ACCESSION   KCHQ01000387
VERSION     KCHQ01000387.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 392)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42322cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>392
                     /note="ultra-conserved element locus uce-249"
BASE COUNT          132 a           70 c           98 g           92 t
ORIGIN      
        1 aggatgcagt cagagagagc agacatgatt tcatggctaa tgattcccac actaatatca
       61 gtgtgggctg cagaggggat aaccaagttg agctgtctta gctcaaatga ttcaattagg
      121 ccagctgtcc ctatttgtca tggctcaact ggcttctaga ttacctttcc agagtgcata
      181 cgtgcctttg cattgaactt accagctcaa cagcttcaga aaagaaatgc aagaggaaaa
      241 aaaaggggag agaatagggg aaagaaagga aagagcagcg gaggggaaaa aatgaaacaa
      301 agaatgcagt aataaccaca ttatccactt aaacgctgag gccaattaca gagataaatg
      361 tgactttttg ttttgcaggg gatcctttgg tg
//
LOCUS       KCHQ01000388             405 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 42416cha ultra-conserved
            element locus uce-319, sequence.
ACCESSION   KCHQ01000388
VERSION     KCHQ01000388.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 405)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42416cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>405
                     /note="ultra-conserved element locus uce-319"
BASE COUNT           81 a           92 c          136 g           96 t
ORIGIN      
        1 tttgtccttg ggctgagagg gcacctggct cctcttcccg tccttgtgat ctctctgttc
       61 cctctctctc gtgccgctct atcccttctc tatctgtctc ttcctctctt ctctcaagct
      121 ccgatccctt catcccccct tctcgcgctc tccctctcct ctgcccaagg cgatgccgtc
      181 ctgcaggctt tgatcagggg gccagggagg agagaggaag tgggtcagaa agttgtgctg
      241 gagactgcag gagaacaagg ctggaatatc gagtaggtga ggctgggaga gggagagagg
      301 gagagatggg gtaatctagt gagaaagtga tagagtgaga gagggtgagt agtgggggaa
      361 gagaactggg agggagtagg taaagaggaa gggggggtga aatgg
//
LOCUS       KCHQ01000389             543 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 42518cha ultra-conserved
            element locus uce-318, sequence.
ACCESSION   KCHQ01000389
VERSION     KCHQ01000389.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 543)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42518cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>543
                     /note="ultra-conserved element locus uce-318"
BASE COUNT          163 a          127 c          134 g          119 t
ORIGIN      
        1 accatagttt agtgcagaag ccaggagttc ctaggtctat gtccgtcgaa gaatattgtc
       61 tgaatcacta cccctggcac taacaactcc aatgatgaag tcagcacctc tcaacatctc
      121 accccttaat ggagtcttca ctgcctttgt ccttaaccat ccatttccat taattattca
      181 aggggagaaa ggaaaaccgt ttgagtgggt aacactgatc cagtgtactc aaccaatcta
      241 tgcagtgtaa gtaataaaat accacgcact cagacgacac aataaaagag atggagacag
      301 aggagacgct tgttaaaaat gtaagtagac ggaagctacc cgaagacaac aaagggagga
      361 ggcggcggcg gctcgggagt caaaagacac agcaacgaca tcttagtgtc tgggttaatc
      421 agcaaaacag gccgatagca gctggtgttt cactgtatcc gcccggtcca cggagggcgc
      481 ctgtctaagc agaggctgag tcgatgtgat gcgccctcag tgcagctgag tgatgctaat
      541 tgg
//
LOCUS       KCHQ01000390             724 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 42706cha ultra-conserved
            element locus uce-8, sequence.
ACCESSION   KCHQ01000390
VERSION     KCHQ01000390.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 724)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42706cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>724
                     /note="ultra-conserved element locus uce-8"
BASE COUNT          224 a          138 c          142 g          220 t
ORIGIN      
        1 ctactacttg gatgaagttt cattgaagag tgagacctac tttactttgt aactgtgaga
       61 tttaaggctc tgctcctcct agtggatgat tttagctatg ttttcccctc agagctgtac
      121 acaaatgggt ttgatggcag aggtttaaac acatcacata ataaaactgt taaccacttt
      181 ttattctctt ccttgtggag ctccagcgat ggcgagtgga aagtgggaat tattggaatg
      241 tttttgatgt aacctgacag gctcaccata tagaaagtaa tagaaatggt ctaagccctg
      301 ctgttcacct agtcaatttg aatttcatga ccaatcaaat gtagacaagg tgtcatttgg
      361 tgggtaggga agagaggaga gtgaatccct ttcccaaaca gttaatccaa ctttaatcct
      421 agtcattagg aattagacat gccgagctgt ccggccgtgc ctctaaatta caatcaaacg
      481 gttaccaatt acacaaatta ttgatggtag attctctttt caactgcaaa ttaaggctat
      541 taaggaaggc tcctttttaa tgcaaaagtg actaattaac cagcggatgg gaaatctgct
      601 gcccagatat caaaaaagtt ctcagcacac attgcagaaa cacaagggaa ccaattagtt
      661 taattatcaa aacagctaat taaaattgca cagttcctaa ttagttcttt gcttttgcct
      721 ctaa
//
LOCUS       KCHQ01000391             583 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 42889cha ultra-conserved
            element locus uce-310, sequence.
ACCESSION   KCHQ01000391
VERSION     KCHQ01000391.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42889cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-310"
BASE COUNT          190 a          116 c           93 g          184 t
ORIGIN      
        1 tttaggcccg agagaaggtc gtcgccagcg tcactcagca aattctgctt tctctcgatc
       61 ttaagaactg acactatgag ataaaacgtc ttttttttta aagtgccact ttattacaaa
      121 agtataaact tgactgacat ttcatgaata gtaatcttga tataaaacat tacaatcttt
      181 tgcacttagc acttaattac acgcttctga gtacaagacc ctgtagtctg aatagcaaac
      241 acacaacatt agctgccaca tttaacttag ctgggctttc caagaacaca ccgtagcttc
      301 atggcttcaa aaacaacaaa cagaatacac tgaaatttac attgcagctg ttttgcagtt
      361 ttgtgtcaca agagaagtca ttccaaaaca caattaaaca taatagaaaa agatagattt
      421 cttgacactg atgatatatt tattattctt tctcttttgt aatgtacata cacattgcat
      481 caacatacag tataatcaca ttgtttgctg gggatatttg gtcaaatgaa atcaccgtga
      541 ctgtccagga ttttggatgc aattttgagt gcgtcatcct cgg
//
LOCUS       KCHQ01000392             335 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 42980cha ultra-conserved
            element locus uce-313, sequence.
ACCESSION   KCHQ01000392
VERSION     KCHQ01000392.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 335)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 335)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="42980cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>335
                     /note="ultra-conserved element locus uce-313"
BASE COUNT           86 a           95 c           73 g           81 t
ORIGIN      
        1 ccttttcaat aactcagact aatgttgtgc ctttgctcag accggctgtt gccctgggtg
       61 cgtgtgaaat gcttggcgtg gacaaagtaa accacggccg gtgcccatgc tccattgtcc
      121 tcaaagcctc ctaaagaggt ctcttcacag gtccagcaaa cacactctcc agactcttgg
      181 catatctctg aagatcctcc ttttgtgtga ggaaacacat tactctctca aggagaggaa
      241 caggggaaac aaggcagcac tagtgaaaag gcttaagtat ctcacccccc accccagacc
      301 acctcttctc cttgccagat gataattggg actga
//
LOCUS       KCHQ01000393             371 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 43074cha ultra-conserved
            element locus uce-312, sequence.
ACCESSION   KCHQ01000393
VERSION     KCHQ01000393.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 371)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 371)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43074cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>371
                     /note="ultra-conserved element locus uce-312"
BASE COUNT           99 a           76 c           93 g          103 t
ORIGIN      
        1 attttcaccg gagccactta atgttcgact ggctctcggc ctaagtgctg cattttggtg
       61 cggttagccc tttaaagagc tgctgcatta tggtggtgag gagcagcatt aacatccact
      121 gttccaatat atcttctacg ctctggatca gggcctgata atagcatctg ttaacatgca
      181 ctaagtacca ttatgtagca catcacttca taaataatac gattaggcga ccttggggct
      241 ttgcgacgag ccgtgtgttt aaatgttctc atcatttatt tagggtacga attaaaggaa
      301 gcgccacttc agagaaggag gaggaggagg acatggctgg catacatatc taccgagtgt
      361 gcaagagaga g
//
LOCUS       KCHQ01000394             611 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 43166cha ultra-conserved
            element locus uce-3, sequence.
ACCESSION   KCHQ01000394
VERSION     KCHQ01000394.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 611)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43166cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>611
                     /note="ultra-conserved element locus uce-3"
BASE COUNT          192 a          127 c          108 g          184 t
ORIGIN      
        1 ctaagcacac aatttggcgt ctgattcctc cattgtgtgg cggaacattg aaacaaccca
       61 taaggaaaaa tgaatgaact gaataccatg cattctttaa aaagactgct ggtagattag
      121 cctcgctgct aatcttgcct gctttcagtg gtatcaaagg tatttcccct tgttcaagca
      181 ggttaatgcg agtgtatcac aacaacacaa tccagccctc tgtctggcta ttacagatgt
      241 tttgtcgtgc cagtattaat ttttttcctc atactacaaa tttctataca cagtatgtta
      301 acaggaaatt gcataatttg cacacgaaaa cgtgtacaga ccaacatcat ttctgccatg
      361 gtataaactt ttcctcctgc ttgattgcta aagctcaagc gttgacactt gtgatgtact
      421 ctgccaagaa cattaagtat ccgaaagtga taaagcttca atttgctaga ccattagact
      481 aattactgca ataattaagt aactacttga ttagaactaa tgggtaccta attatccagg
      541 aagaaaggat caggtggtaa ttaatagagt caagctgatg tcttctgact taccaatgcc
      601 gattaccaaa c
//
LOCUS       KCHQ01000395             231 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 43358cha ultra-conserved
            element locus uce-1, sequence.
ACCESSION   KCHQ01000395
VERSION     KCHQ01000395.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 231)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 231)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43358cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>231
                     /note="ultra-conserved element locus uce-1"
BASE COUNT           57 a           61 c           59 g           54 t
ORIGIN      
        1 gttagattgg cgcattgtga aaagaggttc tcagtgtctg ggcgcttgcc agctgacatt
       61 ccacggagac aaattgagag agaggctccg gcagatttat cgggccattg gctcgcctca
      121 ggaattctct tgtaacatgg cactcctgtg aaagggataa agaaattagt gtaaaacagc
      181 ccccacgccc cctctcccac agcacccgtt cggatatcca gcgctacttg t
//
LOCUS       KCHQ01000396             600 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 43447cha ultra-conserved
            element locus uce-316, sequence.
ACCESSION   KCHQ01000396
VERSION     KCHQ01000396.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43447cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>600
                     /note="ultra-conserved element locus uce-316"
BASE COUNT          174 a          140 c          126 g          160 t
ORIGIN      
        1 tgtatctgct ctcccagtat tcttccttta tcagagtgct ctgcctggct ggagagcgga
       61 gagacagagg gctcgttgaa aacctcttca cctgctccct tcacccctcc tcctctcctc
      121 catgtgtacc tgcaacactg ggctgcactg catcatgggt gcagctgagg ccatgccaaa
      181 acccaatttg gaacgtgtcc agcacttcat tggaaagtaa tggttttcac tgaactgagt
      241 tatgaccagc tgtttgcaga cagtctgtga catactgatg gagcagaaca ccgtatgttg
      301 ctttccaaat caaatgatac aaggagtgtg acagtgtgga gaaacatctg tcattagcaa
      361 ttttcagcac gctccactaa ttctggacaa aatacgccta atgaagttac tgcaggaaac
      421 ttcaaatatt gtcagtgcaa caaggccata agaagccggt gctcaccaag gcctgtaatc
      481 tcattcattt gttgtgagaa aaatacagaa ggaggaggat aattgttttt gatcatgatg
      541 ttttaaaatg caaatcacaa acgttcttct ttaatccgag aacaaaaacc caagaaatca
//
LOCUS       KCHQ01000397             376 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 43547cha ultra-conserved
            element locus uce-1272, sequence.
ACCESSION   KCHQ01000397
VERSION     KCHQ01000397.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43547cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>376
                     /note="ultra-conserved element locus uce-1272"
BASE COUNT           84 a           96 c           72 g          124 t
ORIGIN      
        1 atgtagaata tttccaagga agaaacaggg aaacattctt ttcattagac taaccccgac
       61 cctctcattt ctagcagctg tccctgcgga tgcacaccct gcttcccttc tcttacgggg
      121 tatgatgtgt ggatgaaggc tctttcccgc gccataatga ctgtacacca agattttcaa
      181 gggcccgctc atgacaatcc cattttctgt gtaatttcat ggttgtcttc ttgaatgaag
      241 atattggctg ctctgaagca cgaggtcaga gtctccctgc tccgttttct ggattgttcc
      301 ggagtatgtt tcccttcact tgatgaaaag taattcatca tttacacccc tgaattctgc
      361 cacttttttc cctttt
//
LOCUS       KCHQ01000398             466 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 43738cha ultra-conserved
            element locus uce-1270, sequence.
ACCESSION   KCHQ01000398
VERSION     KCHQ01000398.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43738cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>466
                     /note="ultra-conserved element locus uce-1270"
BASE COUNT          132 a          105 c          107 g          122 t
ORIGIN      
        1 agcagctaaa catacttgac tggtcaaaaa gccagtaaat tacattgaca gaatgacacg
       61 tgtgattaaa agaatccatg ccgcttttac ctttctgcgc ttcacaccta cagtggcaca
      121 acgacgagag ccggcaactc ccaccccgct aattaccatt atcagtgaaa tggtagggtt
      181 tgactcatta gttccatgtg catttaatta gaggcaggct gaaattggat ttaacttatt
      241 actttttcat ggatcacttt cttgtcatca cttcaaattg gattgcagcc ccaggtaact
      301 aattatgcca gccgcaggat caggagtgga gaaataggta attaggaaca acactgtcgg
      361 accctcgctg atagtccagc agcaccaagg tgggaggagg gggaacttga agctcgtttg
      421 tggcgttgct cacgagcctg gctggttaac tacatctcat tgcaag
//
LOCUS       KCHQ01000399             373 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 43903cha ultra-conserved
            element locus uce-1276, sequence.
ACCESSION   KCHQ01000399
VERSION     KCHQ01000399.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 373)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="43903cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>373
                     /note="ultra-conserved element locus uce-1276"
BASE COUNT           90 a           87 c           76 g          120 t
ORIGIN      
        1 cttttcaaac gcaattccta ttcttctttt gaggtctttt aagtcattat aaatgttttc
       61 tctctccctc tctgtctgtc tgtctctctc tctccctttc cctagcttta gtcttcttga
      121 acaaaataag tgcagatttg ctggaaatca gtggcttttg tgtgtggctg caggagcatg
      181 gtgaaatgtt tggacactaa tacccattca tttcggtagc gccataaata aaagctgcca
      241 gctatgcggc tgccgtgaag tggtattctt tggtgcccag caggatgtcc tgttcacatt
      301 agcgcagcag ggaaaactgg ccggaacagc cagacaacta aatcaagaca ttgtcaactt
      361 ctgacaaaat tgc
//
LOCUS       KCHQ01000400             204 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 44001cha ultra-conserved
            element locus uce-1277, sequence.
ACCESSION   KCHQ01000400
VERSION     KCHQ01000400.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 204)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 204)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44001cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>204
                     /note="ultra-conserved element locus uce-1277"
BASE COUNT           53 a           52 c           62 g           37 t
ORIGIN      
        1 aaaacccaaa ccacaggcac gggggcctat tgtcatgggc gcatccatct ggatcaaggc
       61 cattagagga tatttgcact tcctctgtgg ctcctggctc tttttgacat gcggcagaag
      121 gagcaggcat cacccaccag tgcagggcca attgaggtgc agattgacca gagggacagt
      181 gaagaagggc agccagcagg gcag
//
LOCUS       KCHQ01000401             566 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 44236cha ultra-conserved
            element locus uce-1279, sequence.
ACCESSION   KCHQ01000401
VERSION     KCHQ01000401.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44236cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-1279"
BASE COUNT          152 a          129 c          115 g          170 t
ORIGIN      
        1 agcagtggta gtgctagtca gttgatattg catattaggt tgttgatgca gattatgctg
       61 caacagataa agtcaattcc aggaagcaac ctctttcacc aaagtcaagc atagctgtaa
      121 gacttctctg ctatctgaaa aataggtttg aattgcatgc aatttgtggc aggcagagca
      181 ctccaatgga ggaaggctat tagtgaaatg ccttgccact gtctctttaa atgccaataa
      241 attcccatca ttacagaatc tggcagtttt cctccctgtc tgcagcctgg gtctttatct
      301 cgctctgcct cagtctctga gcatgtagat ctggcccagt tagattgtca tacttaacaa
      361 acattaatga ttaatttcct ccactgagtc aaatggggct aaagggatga ctcgattcat
      421 cttatcgcac cacaaattag catttcccca tattctccag catcaactgt gcattaaaat
      481 tccacattta ccattctggg cactggcagc tgtggcgaaa gcgccaagga gatcttcctc
      541 ctgtgttgct ggagattctg attact
//
LOCUS       KCHQ01000402             219 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 44327cha ultra-conserved
            element locus uce-621, sequence.
ACCESSION   KCHQ01000402
VERSION     KCHQ01000402.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 219)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 219)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44327cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>219
                     /note="ultra-conserved element locus uce-621"
BASE COUNT           83 a           52 c           42 g           42 t
ORIGIN      
        1 attaattcaa ccctagtgca aagccctctg gctgggagca tcacagtaac acaggcatgt
       61 atgtctgata aatgactact tacattgatc tcagtgatgg caatgtcaac cacgctaccc
      121 acaacaatta aggcatcaaa cgtgttccat gcatcagcaa aatagttctg caagcacaag
      181 caacaaggac acacagaaaa gaagaaagag agacaacag
//
LOCUS       KCHQ01000403             625 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 44414cha ultra-conserved
            element locus uce-690, sequence.
ACCESSION   KCHQ01000403
VERSION     KCHQ01000403.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 625)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44414cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>625
                     /note="ultra-conserved element locus uce-690"
BASE COUNT          206 a          121 c          123 g          175 t
ORIGIN      
        1 tggagaataa tggatgtgaa ggcacaccaa acacggcctt taaaaatgta tgagtgcccc
       61 ccaaaacctc cctctccctc cacagaatag agctatcact ggtgcctgtt atctcccaga
      121 acccccaggt agaaaatggt aatgatacca cttaacatcg ctgcacatat ggagggaaaa
      181 tggaaatgcc aacagcacct caactataaa gcaaatcaaa ttgaaatatt aatccgctga
      241 ttaatataac attatgagag cccattctct ttgttgttaa acaacaaagg gttgcaaaat
      301 aagcaactgc ctaagaggta aggggtttaa aagagtccca cagaggtgct aaagcccctt
      361 tcaaacatca ttactctgca taatgtattc ccttccacag tgctgagatt tgatattgat
      421 gtttactcat ttatttttta attaacgttc gttgttaatg aattctttga tgagaggcat
      481 tttgtaaatc attatccttg gaagaggaaa aaagggacgc atcgctcttg ccccttatac
      541 tcgtgacaga agaaaaaatg ctaggtgtaa ggggaaaaag ttgcacatga gaagtagggt
      601 cattgtttaa agtttgtttt ttgat
//
LOCUS       KCHQ01000404             374 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 44508cha ultra-conserved
            element locus uce-691, sequence.
ACCESSION   KCHQ01000404
VERSION     KCHQ01000404.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 374)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44508cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>374
                     /note="ultra-conserved element locus uce-691"
BASE COUNT           98 a           79 c           91 g          106 t
ORIGIN      
        1 ccattataat tctatcaagt acatggagtt cttgttctct ttgatccccg acactgtaaa
       61 tcagacaatt aaccacgtac cacgttcttg tttattgtgt gctgcaaata tgctgtctac
      121 tattctgcta atgcagacat aagggtgctc cagtgttgct ccaactgcag gaggcaaaaa
      181 gtcacctcag gtcgatggca ctcagcctgt aaacagggct tcccgtaaaa tcaatgatct
      241 tcagtaggag ctatcagtct gtggaacaga aatagccgtg gctgtgttga gtctgaggca
      301 gtgaagaaca gtactgtgtg tttacatcag tgtgtgtgag tacagggggc cagtcactgg
      361 catgtctgga agta
//
LOCUS       KCHQ01000405            1017 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 44697cha ultra-conserved
            element locus uce-1190, sequence.
ACCESSION   KCHQ01000405
VERSION     KCHQ01000405.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1017)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44697cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>1017
                     /note="ultra-conserved element locus uce-1190"
BASE COUNT          295 a          234 c          233 g          255 t
ORIGIN      
        1 cccaggaagt gctaaatagg cttgctacca gagtatacag tgttagtgat gcagcctgga
       61 agcggtgttt aaagatcaaa agcttttgga aagatacttt ttatttgttt cagaagcatg
      121 catttttgaa gctgtatgaa tacaagagtt cagacccttt taatataaaa ttatggtcca
      181 atacaggcta atgcagacgc caggttgaca aaattatatt atataagttg tgaaagatac
      241 tccactctaa tgctgtaata tttcctggat attaagtaaa atgcattttg agcatcggtg
      301 aaacacaagc aagtgcacac ttggtgagct tcacaggcac actgtttatg ttgacacatg
      361 caactctcct cctcatgcaa atgcaatcta aacattaggc gaagggaagg caagcgtagc
      421 ccataaaggc tgtgagctcc aaacactttg aacagacaac tatcactaat cactcccaga
      481 gcagtgcggc gtgtaattac tctgccaaac gtttgccttt cacagcttag caccgggagc
      541 cctgaccctg cgcttccctg tctttcctca ccaccatgca tgtggaaggg gtggaccccc
      601 acccaccacc accacacaca ccctccctcc cttcccttct cttgaccgag ggggtaggcg
      661 agctgagctc cctctcaata tttagagaaa gagtggagga ggaaagagag agggagaaag
      721 acagggaggg agaggactga ggttggtgct tccggctttg tgggagccca tttaaacagg
      781 ctttgaaacc ctagccatcc ggagatcaga aatagcctta ttgactgcat gggcccagaa
      841 gtgactgagc acacagggtt cttagagttc acccttcctc gccactcaaa acaggagggg
      901 ggcattgcaa gctaggacca tctacaaagg ctacagacat aaatttttca tcaggagaaa
      961 aataatattg ttctggctat ttttagtgtc acaaggttgc gccgtcgtat aatttct
//
LOCUS       KCHQ01000406             570 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 44789cha ultra-conserved
            element locus uce-694, sequence.
ACCESSION   KCHQ01000406
VERSION     KCHQ01000406.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 570)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 570)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44789cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>570
                     /note="ultra-conserved element locus uce-694"
BASE COUNT          127 a          149 c          149 g          145 t
ORIGIN      
        1 cccaaaacac ctctgatcag cctccagtag tgggcgagaa ctatgtgtgt gagcacacgt
       61 gtgtcatggt tggtggtgag tgtgcactgc tggtgatgac tgttggagat ggaggggtga
      121 tggggggagt ggagggcggg agaggaaggg gtgtgtgtgg aaaccctgag aacttttttt
      181 tctcttggcg tagctgcact gctctccagg accacggagt gttgcccccc tgcagcttaa
      241 gcctctgtct ctttttgtcc ccagcacaac agcctgtggc attccatggc agcaaatctg
      301 gctgtgctgt cacatggggg agattagcca aactaagacc tcaatagaat gctcacttta
      361 ctcacccatt ccagcagtgg ccgccccccg cgcccaaaca ccctcgcaca cccaatttaa
      421 ccgttcctcg tctagacaga gtgcaaagcg attattattg gcattattaa gacttatatg
      481 caatgctctt ttttgtcatt gtcacattcc cagcggtaca catgagctgc caagcaatga
      541 gccctatttc ccactgtgaa ggacacttcc
//
LOCUS       KCHQ01000407             705 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 44888cha ultra-conserved
            element locus uce-695, sequence.
ACCESSION   KCHQ01000407
VERSION     KCHQ01000407.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 705)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44888cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>705
                     /note="ultra-conserved element locus uce-695"
BASE COUNT          196 a          146 c          183 g          180 t
ORIGIN      
        1 tttaagaggg cacactatgt tcggccccct gtctcttaat cctgggcgtt tgtcgcggct
       61 aattatggtg gacaagcctc tttatcgaac ctgctcctgc catcggcatt aggatgcatg
      121 agctgcgcct gttgttttaa acgctctcat taaccacaca aatcagtgct gttgacagag
      181 tgcttttgaa ttaagcgtct cgcccccacc actgcgcgcc aatgcgtgca gggcccagga
      241 caaggagcaa tttataacac cattagccac actcgccgag gttacaggca tcaaaattgt
      301 tcccgtctaa ttattcttaa tggatacagg gagggagcga cgctcaggac agctttttca
      361 ttagccctca atcaagaggg tcgggggaga gaggggtggg ccaaatgtac tgctcaggca
      421 aacgggaaat caaaaataat cgtgtttgct tttttcataa tacaacacga acgcatagat
      481 ggagggagag agagggatgg agcgagggtg agtgaggaga tgcagagaga aaaaagaggc
      541 actgctcttg acattagaag aattctgagt gttgtctagc aaaaacacat gcatattgag
      601 aagtgacagt tcatttgctt ttactgcttc gcagactaat ggcagagtaa acttgtgctg
      661 cgtaataaga tttctaagac gtggttattg gttaatgaat tcaga
//
LOCUS       KCHQ01000408             430 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 44983cha ultra-conserved
            element locus uce-1195, sequence.
ACCESSION   KCHQ01000408
VERSION     KCHQ01000408.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 430)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 430)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="44983cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>430
                     /note="ultra-conserved element locus uce-1195"
BASE COUNT           88 a          103 c          113 g          126 t
ORIGIN      
        1 aaactatttc cgcacatttt taattacgtt tcagagctcg ttggcctcgc tctgcttcta
       61 tagattggaa atagcccaca cttgtttctc taggcagcct ggtcgaacgt gcatgagaaa
      121 ttgagacatg gcctctgctg ctggctcgca gtatcgctgc tggccccaac tgtgtatatg
      181 tgatcccact ctggaatgtt tttccaacac gtaggctttt cacagataca ctagagagga
      241 ctggcatcac agtggcaagt gctgcattca gactgttgtg tgcccaaggc ttactctcac
      301 actcacgtca cacattcgag ctctacatgg gaatgggcag agcagtgtgt ttgtctacat
      361 acaccccagg tttttgagag ggtgtgggcg catgtgtgcg tgtgtgtgtg tgtgcgcgcg
      421 tgtctgtgtg
//
LOCUS       KCHQ01000409             367 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 45074cha ultra-conserved
            element locus uce-1194, sequence.
ACCESSION   KCHQ01000409
VERSION     KCHQ01000409.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 367)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45074cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>367
                     /note="ultra-conserved element locus uce-1194"
BASE COUNT           53 a          153 c           66 g           95 t
ORIGIN      
        1 gtgcagatgt ttgtgttgga gcatgtcggt tcctccagat cctcctcggc tgatctgagg
       61 cggggacccg tcccctcctc atcctcctct tcatcctcct cctgcatgac tcatccccat
      121 cgatcactca cctcctctgt ccgcctgcct gctcgttacc gtcaccttct cctgtaggac
      181 tcccccatcc ttcctcacct cctcctcctc tgtcttcctc tgctcccata ggcccttatt
      241 cattctctcc tgtccatatg gtttctgcag tcaaacagaa gagcgccttc gcccccgtcg
      301 tgcggccaca gacctccccg ccccccacct gcaccaccac caatggcagc aacctccagg
      361 gtgagca
//
LOCUS       KCHQ01000410             213 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 45165cha ultra-conserved
            element locus uce-698, sequence.
ACCESSION   KCHQ01000410
VERSION     KCHQ01000410.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 213)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 213)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45165cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>213
                     /note="ultra-conserved element locus uce-698"
BASE COUNT           52 a           39 c           57 g           65 t
ORIGIN      
        1 cctgtattgt atacagttcc tggtacacag cagcacgaga gagtttttct gagtcatttc
       61 cagtgtgaag ttatggtgtt gattagcgca gtgacaggtg ccatgattaa aatggctgat
      121 agtaatagtg cagcattcat gcattgacaa ctttgctctg catggctttg tgaggggtga
      181 tgtatgacac cattagggta acctcagggc cct
//
LOCUS       KCHQ01000411             321 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 45354cha ultra-conserved
            element locus uce-1199, sequence.
ACCESSION   KCHQ01000411
VERSION     KCHQ01000411.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 321)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 321)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45354cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>321
                     /note="ultra-conserved element locus uce-1199"
BASE COUNT           86 a           62 c           90 g           83 t
ORIGIN      
        1 gtgcagggag caggggagca gcggcgtaga ggagttagaa aagctctttg gtggctggat
       61 ggctggctgg ttcagtgcaa gtgaagatga ataatttagg gaacacaaag aaatcaatgt
      121 ggcatcttta gttaatttga tttgccgcat tagagaacaa ctggctgcct tatctaatta
      181 cgcacacata tgcttgggta attgttgcaa agtcaatagt aaacaggcta cgttcctttg
      241 aacaatttct accactgctg ctcaactttg ggccgcacgc cggctttgaa gtcctgccct
      301 gagctgcaga gtcagaggga g
//
LOCUS       KCHQ01000412             252 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 45444cha ultra-conserved
            element locus uce-1051, sequence.
ACCESSION   KCHQ01000412
VERSION     KCHQ01000412.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 252)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 252)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45444cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>252
                     /note="ultra-conserved element locus uce-1051"
BASE COUNT           68 a           62 c           64 g           58 t
ORIGIN      
        1 cctcccaaca ccagactgga ggaagacgaa tagcccccca atgggccctg agcagataaa
       61 atacacccta ccgtcttcaa caccaggtgt gacagccatc aggggtggcc catcagcagg
      121 aggtacagag aaggggaggt aagggtgagg gggcacatta ggaacatatc agcaattact
      181 ctctcggttt atttttcttc ctgctttaac gcctggatac caagttatat tcatcctggg
      241 tgttgattgt at
//
LOCUS       KCHQ01000413             460 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 45532cha ultra-conserved
            element locus uce-1057, sequence.
ACCESSION   KCHQ01000413
VERSION     KCHQ01000413.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 460)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 460)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45532cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>460
                     /note="ultra-conserved element locus uce-1057"
BASE COUNT          135 a          126 c           86 g          113 t
ORIGIN      
        1 actatgtttg taaggtcact cagagtacat ctgtatggag tgggaactca ctcgctttca
       61 ctgtcacaac cactcacaac agccatctgt aatgctgtta tgtggagcac tgtgtccctt
      121 tgtcccttac acacagacac acacacgcgc agccacacag tcgttcacag accctcacac
      181 cagcacatac gtgcgcacga acacacagac accttcaaac ccgcacacac tcacacggcg
      241 tccctgttca cacgacaaca aatgaaccaa acgcaaacac acattaacat aatgctaggt
      301 tctaattgca ggggcatgtg tttctaatga aaaagttgtt ttagggtttt attccgctcg
      361 gctgtcaaac aattcacccg tgttttgaaa tataattgtg gggaccgtaa gagtttcgaa
      421 accaaaccaa aacattgccg cgatctgggt ttctaatgtt
//
LOCUS       KCHQ01000414             439 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 45624cha ultra-conserved
            element locus uce-1054, sequence.
ACCESSION   KCHQ01000414
VERSION     KCHQ01000414.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 439)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 439)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45624cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>439
                     /note="ultra-conserved element locus uce-1054"
BASE COUNT          108 a           90 c          125 g          116 t
ORIGIN      
        1 cattactccc tgacccattt gacgatcccc tcatgtggaa tgtgcatatg ccgaatcgct
       61 gcggatctgc acagtatggg gtgaggtgaa gtacttacag aaatatgact tgacacgctt
      121 tatcaaatgg ggaaagatga agacgaaaca gctgctggtg ctgtcgtaag caatctggcc
      181 gtgattgaat aaaagtgtca ggaaaagggc cgcttgatgg tcttttgttc tcccccatcc
      241 agcttgatgt tagtttgagc tgtcaggagg gaatcacagc tgggtgattt atcaatactt
      301 ggagtgacct tgcagccaca ctgccgcgcg cgtgggtgcg tgtgtgtgtg tgcgagcgtg
      361 cacgagctcg tgtctgcgtg tggctctcat ggattaaaaa gacaaagtgg aatattttca
      421 aaatagttgg cacatgcag
//
LOCUS       KCHQ01000415             301 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 45781cha ultra-conserved
            element locus uce-1298, sequence.
ACCESSION   KCHQ01000415
VERSION     KCHQ01000415.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 301)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 301)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45781cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>301
                     /note="ultra-conserved element locus uce-1298"
BASE COUNT           95 a           62 c           70 g           74 t
ORIGIN      
        1 ttttgaagtt attatcgccc aagctccctc ttggatgtgg ttgctgggtg acgggtatct
       61 tagcacccac tctgactggg aatgatttga atggaatcca gaaatctccc ctgagtacct
      121 gtaaacacat tcgtgccttg tagaaaacaa atatattata agagagctca gcagaggaga
      181 ggagggagag agacaagctg gcaccctcag tggcagctca cactgagcgc taaacaaaac
      241 aattaccgtc atttgcaaat atgtgtgttt aggcataaac actcttgaaa taggaacaaa
      301 a
//
LOCUS       KCHQ01000416             206 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 45877cha ultra-conserved
            element locus uce-1299, sequence.
ACCESSION   KCHQ01000416
VERSION     KCHQ01000416.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 206)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 206)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45877cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>206
                     /note="ultra-conserved element locus uce-1299"
BASE COUNT           58 a           79 c           32 g           37 t
ORIGIN      
        1 cccccccacc ctttccacac agcgggcaca attacgctcc ccatcacccc accagctggc
       61 ccccgtgatc ccacacttct tactaaacgc gactccatcg gccctttccc tcttaacctc
      121 tcagcacccg ctccggggga atggtgaggc tgcacacaaa actgggaaaa aagaactcag
      181 acacttctac tacttaaaaa aaaaaa
//
LOCUS       KCHQ01000417             358 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 45967cha ultra-conserved
            element locus uce-482, sequence.
ACCESSION   KCHQ01000417
VERSION     KCHQ01000417.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 358)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="45967cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>358
                     /note="ultra-conserved element locus uce-482"
BASE COUNT          113 a           54 c           66 g          125 t
ORIGIN      
        1 atttaacacc attggacacc ctttatagat ggtccagaga ttagccaatc actgtcagat
       61 tttagtagtc agtgctgttt cctttgtgtg tttcaattct caaattcaga aatatctcac
      121 aaaagctttt ttgtaagaaa aaagctttcc atttcatatg tctttagaaa ttggggagct
      181 ggaaaaagag gatttaaggg gtcattttga taaagaagtg cacatttcaa gaatgacaat
      241 gcatgcatta ctgtattgta aattaatata atggtattaa tcattagtag gtctgcaggc
      301 attagtaaat tacatcttac caaggcatct catgctttgt ttgtgcattt gcttgaaa
//
LOCUS       KCHQ01000418             622 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 46139cha ultra-conserved
            element locus uce-1291, sequence.
ACCESSION   KCHQ01000418
VERSION     KCHQ01000418.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46139cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-1291"
BASE COUNT          224 a           93 c          166 g          139 t
ORIGIN      
        1 ctggactggg tactgggctt gctgaactac agtttttata ggagaggaga tggttctgta
       61 agatcggatg ggagaggcca tgtcactaac tgacttaaca gaagaggcag gggatccagg
      121 gatgttggtc ttgatggggg aggcagagtt gatggaccag acagacttta atggagaggc
      181 agagggcgtg ttggatgacg aactggagag ggagccaaac ccagacttgg cttggccagg
      241 gacggcgaca ggaacaggcg accacgcctg ataagatctc gttgaaaaga caggtttgtg
      301 agggtagcta gaaggctgtg ttctcggcga gcttcgatca gttgtttctt caacaataat
      361 ttaaatgaaa agcaataagg aagtaaacat aaaatgtaac ggaaaataat ttgaaataaa
      421 acataaaaac cagaaagaga aatttgagtc agtcagaaac agtatcattc acaggagcaa
      481 gacaaatttt tacgaatttt acatgaaatg taagaaaggc ccttattcaa aaacccagga
      541 tgatatgaca aatgatgatc taaaatcatg actaatgaca aaatgtgtat aataaacaat
      601 agagcatgta taggaacaaa aa
//
LOCUS       KCHQ01000419             234 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 46228cha ultra-conserved
            element locus uce-1292, sequence.
ACCESSION   KCHQ01000419
VERSION     KCHQ01000419.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 234)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 234)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46228cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>234
                     /note="ultra-conserved element locus uce-1292"
BASE COUNT           61 a           27 c           77 g           69 t
ORIGIN      
        1 tggacgcaca ctgagagctg gggctaaatc tggctcaggc tcaatcaacg tttgcacctg
       61 tcttttccaa agggaattaa acgtagtaga tagagagaaa gaaagagtaa tggtgtgtgt
      121 gagcatgtgt gtgtgcatgt gtgtgtgctt aagtgtgagt gtgtgtgtta aggttaagac
      181 ttgaaggtag agtgggagtg gagagtttgt aaggaacatg ctggttttgt catt
//
LOCUS       KCHQ01000420             520 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 46325cha ultra-conserved
            element locus uce-1293, sequence.
ACCESSION   KCHQ01000420
VERSION     KCHQ01000420.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 520)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46325cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>520
                     /note="ultra-conserved element locus uce-1293"
BASE COUNT          173 a          113 c           93 g          141 t
ORIGIN      
        1 atttaaaaat actttaagca atgctgaatc atttccacct agataatcac ttaatctttt
       61 cctttagtga tgattctcct ttttttttta actgcgatct ctgtaaaaaa taaacgaaag
      121 cttgctctca gcacctactt gatcaatttt aattgccaca gttcccaccc ctccaatata
      181 aacagaaagt tgaaagtaaa agcaagaaaa aagaaagaat gaaatgtatt cctgcatact
      241 atgatctggt aaatgttagc gcctgctgca tcgcactcca tatcacttcg ctccatatga
      301 aaaatagttt gctattttgg aaccccctgg cagccatagt ggatcaccac agacccagag
      361 ctcatttatc ttttgtcaga gatgaagcca aactaacgcc atctcctgaa gctgctaaag
      421 aatgaggagg gacgtaggga gggtaaaaat aaacccggag cccaggtagc tacacaaaga
      481 agtcactcta caagtaatgg gtggcttctg aaagtggaac
//
LOCUS       KCHQ01000421             339 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 46422cha ultra-conserved
            element locus uce-620, sequence.
ACCESSION   KCHQ01000421
VERSION     KCHQ01000421.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 339)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 339)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46422cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>339
                     /note="ultra-conserved element locus uce-620"
BASE COUNT          121 a           67 c           63 g           88 t
ORIGIN      
        1 cgtgaaaaaa caaagaaggc aaagactgag ggaaatctga agcgttctgc cactcaacat
       61 cccccattcc caaacaacag cgtctcactg ccactacaaa tacattagaa atcaattatt
      121 tatggaacag agtcagggcc tctttaatct tttcctttta tccaattaaa ttgtctaacc
      181 attctaagcc tccgtagctc acagggaatg tgcttcttta aaaaaagaga agaagaaaag
      241 attttctctt cagtccttct tttgactttc gatgtaagag agaagagaca cttctgaggg
      301 ctgaagaatg aaaggaaaga aagtgagtaa agtgtaaat
//
LOCUS       KCHQ01000422             476 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 46521cha ultra-conserved
            element locus uce-1295, sequence.
ACCESSION   KCHQ01000422
VERSION     KCHQ01000422.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46521cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-1295"
BASE COUNT          177 a           79 c          137 g           83 t
ORIGIN      
        1 atgagagagt aaaagtgtca acgttaggtg agaagaagag tggaggagga agatgttaga
       61 agaacagaag aataaaagtc tcatgcacta gaggagaaca cgcactcaca ccccacagtg
      121 gcagaagcgg tgttggcggc agtggcagta gtggtagtag tagaaaaggc tacatgtgta
      181 gggctagaaa cattggttac atcgtgctgt tgttggctgg agttggaggc ctgccgcctt
      241 agagccccct gaaaggaagt tccactctgg aacgcactca ctacatccat ctgcaaagaa
      301 tcagacagca tgacaggaga aagcccagag gaaataaaac acaacacagc cagaggagag
      361 agaaaagaga gaaaaataaa gaaaaggcac cagcaaccat agaaaaaatg tcacttggaa
      421 attggattta ggcattatag ttaaaagaga gaggaaaagg aggatagctg ggttta
//
LOCUS       KCHQ01000423             361 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 46618cha ultra-conserved
            element locus uce-1296, sequence.
ACCESSION   KCHQ01000423
VERSION     KCHQ01000423.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 361)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 361)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46618cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>361
                     /note="ultra-conserved element locus uce-1296"
BASE COUNT           81 a           99 c           75 g          106 t
ORIGIN      
        1 atatccttag tgcgtttacg cctgtgtttg cgccctgacc cactggggcc agtgcaataa
       61 ctttggactc cctcccacac tgcatctcgc tgcaatgacc actctcagtt tttatttagc
      121 tgggttgtgt gccttcccag tccagccgct tttcagattc atttccaggt aaacacagtg
      181 tggccagcca caaacctgca gccaacaggc gttgtcacag ctgtggcaga taatggcaag
      241 tccaaactcc agcccggctc tggaatgttt actgtcacca caggcaagtt ggcagcaaac
      301 attttttttt ccagcacttt ctaagaggaa gactctctcg ttattaattt tattttgatg
      361 a
//
LOCUS       KCHQ01000424             428 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 46714cha ultra-conserved
            element locus uce-953, sequence.
ACCESSION   KCHQ01000424
VERSION     KCHQ01000424.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 428)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46714cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>428
                     /note="ultra-conserved element locus uce-953"
BASE COUNT          125 a          100 c           84 g          119 t
ORIGIN      
        1 tgctgctttt attttggatc gcaaaaaagt aaataagtgt cacttttaag cgttgtataa
       61 tctaaatccc tcatccagtg tttttcagtt tttttttaga atctttgatc taaagtttct
      121 atgggcctca ctaattaaaa gatcaacatc taacaggtat gcctggtgga gacagcagcg
      181 cagacactgt agtagttaat ttcccatact actcctgtgt ggcttcaaat tgcagcaatt
      241 ggattttaat ctgtgtacca ctgattagtc atttggctcc ccagccgctg tgtaatttgt
      301 tccacaacag agagcggaac aggcacgtgc gcacacacat acagtgcaca cagttaacag
      361 agagagacac acacacacag acacacacac gcacaagcac cccggtctct ctgccgggag
      421 gtcaagaa
//
LOCUS       KCHQ01000425             835 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 46809cha ultra-conserved
            element locus uce-952, sequence.
ACCESSION   KCHQ01000425
VERSION     KCHQ01000425.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 835)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46809cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>835
                     /note="ultra-conserved element locus uce-952"
BASE COUNT          197 a          166 c          210 g          262 t
ORIGIN      
        1 ggcagcaagt tttgtgcctc cagatttggg agttttttaa tgaagtcgag cagctgcagt
       61 tttcccttca gtctggaaac gaggggcttt gtgtcccttg tcaccctgtg ttaatttggg
      121 ccctaatgta ttttataaac aaagggctgc tctctagcct gacagtcgtg acaccttgat
      181 tccagtgcag gatgcatgca gtacggggtt acaccattaa taatcaactg gcagccatca
      241 caccatttta accacgatca ttatgataaa gggcatacac ttaattacag gcctgcttaa
      301 ttatagctct gttgaagctc gtttgtttgg tcaaatgcta attataccac cacgctcttg
      361 gcaagtcctc atttcaatcc actttttgcc ggctgaacag tgtggcttat tttcatgcaa
      421 atttgatatc tggtgaatgt tttgtctctc ttctttccgc ttttctgtgc cttgtgtgag
      481 tgtgtctttg tttcggaggt gaacatctct cagacaagac ggaatcggga ataatcaaga
      541 gtaattaaac tggaagaggg ttgggaaagg gctgggttgg aggagagagt ggaggtgctc
      601 caatacagcg gagaataaaa aagcctttca tctcctctct gcagacggag ggaggggagg
      661 tgtcggggcg gctggggctg ttgatagctc tgctgtttta gaaatccacc tttagtcctg
      721 tggaagcaca caggatccag aacagggagt aatatttata tttttgtgtg gaagcgaacc
      781 ttaaactttg ttttctctga cttttttgca gctctggatg atgtgccctt tatgg
//
LOCUS       KCHQ01000426             336 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 46903cha ultra-conserved
            element locus uce-951, sequence.
ACCESSION   KCHQ01000426
VERSION     KCHQ01000426.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 336)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 336)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46903cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>336
                     /note="ultra-conserved element locus uce-951"
BASE COUNT           87 a           79 c           77 g           93 t
ORIGIN      
        1 tctgctgtat gtgtaacacg tgattttatt ttaagagatc cctctgcctt cttgggtgat
       61 gatgaagtag cagcgcatgc atataagaag tcggacagtc tctggaggct ttgaccagtc
      121 atgttttcct ctttctttag cccacaatta gaagcgatag tctcccactc ctacgatggc
      181 tccctctcct cagcagagat atatttatct gaggataatt ggccattaaa tcctcacttg
      241 acaactgtga aaatgccacc ccaagagtaa tctggctgcc agaaaatgac aacggttggc
      301 agagctgtcg acggctggga gccacatcag gaatgg
//
LOCUS       KCHQ01000427             282 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 46998cha ultra-conserved
            element locus uce-899, sequence.
ACCESSION   KCHQ01000427
VERSION     KCHQ01000427.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 282)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="46998cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>282
                     /note="ultra-conserved element locus uce-899"
BASE COUNT           76 a           63 c           47 g           96 t
ORIGIN      
        1 ttaatttgta taatgaaata tcaccctctg cagtgtgttc attagctgtg gccccacact
       61 gtagctccac agccgcacaa tgttagctac ctagaaaact gtggttaatt ttgctaatgg
      121 atattttccc actcactgtt caagaggaaa ttaatactgt aacattagct ctttaacttt
      181 tggagaaatt taaattcact tcattccttt caagctggtg ttagccactc attaatctca
      241 gcgttgtgtt gcacaatgct gcctcgaccg aaactctatt gt
//
LOCUS       KCHQ01000428             739 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 47096cha ultra-conserved
            element locus uce-957, sequence.
ACCESSION   KCHQ01000428
VERSION     KCHQ01000428.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 739)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 739)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47096cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>739
                     /note="ultra-conserved element locus uce-957"
BASE COUNT          238 a          176 c          124 g          201 t
ORIGIN      
        1 attatattga ttaatttcag atgaagtcaa gcgctggcac taatcaggct attaggaaca
       61 ttcctccatc aagattcaca ttttcccttt ctctcatgcc ataacttttt gtttgtgcga
      121 accatatgtc ccaaattaat aaagccaggc ggtgtgctga accctcctca ctctgtcact
      181 gcttgtcaca gaagaattgg cctcaaactt attctctctc tccctcgctc tctccccgta
      241 tctctctctg ttctttctgt tttcgcgcga gtgtcccagt taagaaattg cttacatccc
      301 actcagtctg gggctggatt gaaatttccc atagggtatg taccaatatg cagagagcac
      361 acttcgacag atgccatcag agaacaagca tatgaattac caggcagcct gccatctttg
      421 agttcagaca gaatggcatt aatacctgat tacgatccaa acaacaacac aacaacaaca
      481 tgaaagccaa agcaactggg agcaggtaaa ggtttcatca tttatatatt aatggattta
      541 ctaacaaaga ctctactacc ccctccaaag ttaaaatgtc atagaggctg ccaacaatca
      601 agggactttg gaaagaaaaa aaaaaaaaat aggggtaaga aatcagatgc cgtcagcaaa
      661 tcacgttcca ataaattaaa tattcgccac tgctgaccat aactaattca gaagccatga
      721 taaattcatg actacaatt
//
LOCUS       KCHQ01000429             310 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 47289cha ultra-conserved
            element locus uce-955, sequence.
ACCESSION   KCHQ01000429
VERSION     KCHQ01000429.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 310)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 310)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47289cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>310
                     /note="ultra-conserved element locus uce-955"
BASE COUNT          100 a           53 c          105 g           52 t
ORIGIN      
        1 ctgagtgtca gggacagaga gagagaaaga cggaaagaaa gaaagtaggc gatatagaca
       61 gcaaaatgag caagtgatag aagtgaagtg agagtgagag caggagagaa agaaaaggag
      121 gggcgacctg agagaaatca aacatgggct ctgtgcaaca gaggtacgtc ggcaaacgag
      181 catgttatgg cagcccgctg ggacttccct ggcagatcgt ttgtgctgtt tcccaatctg
      241 ttctgaggag cggcacagcc ccacatgggg acgtgtgaag gcgtcaagat gggattgctt
      301 aagacagatg
//
LOCUS       KCHQ01000430             484 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 47380cha ultra-conserved
            element locus uce-81, sequence.
ACCESSION   KCHQ01000430
VERSION     KCHQ01000430.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 484)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47380cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>484
                     /note="ultra-conserved element locus uce-81"
BASE COUNT          110 a          130 c          119 g          125 t
ORIGIN      
        1 acacacacac acacacactc acatgacctg cattgctctc tttccagctg taggcaaact
       61 gcagcagggg ctattaatgt ttcaaaacat agtgtatctg tgtctctgtc tctgtatttt
      121 tttttttttt caagggcaca ctgccagagg gaaaacgtgg gaggggtttg gtggagggtt
      181 gggtgttcag acacagacaa tatttccccc atctctcgtg cttcaatgct tcactgctcg
      241 ccagactcaa tcacatgtgc ggtgtgcttt catgaattaa taacgggcac tttggaggcc
      301 tggcaggaac atggtgacca cacgctgatg gaagtttaat gagcagcacg gggaccacgc
      361 cgccatggca ttggcgggtc tctcggcgca ctaggccatg tccccggccc tccccacaga
      421 gccacagtgt ttgggctctc attacctaga taaatatatc tgccctctgg atcagcccac
      481 aggc
//
LOCUS       KCHQ01000431             281 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 47469cha ultra-conserved
            element locus uce-892, sequence.
ACCESSION   KCHQ01000431
VERSION     KCHQ01000431.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 281)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 281)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47469cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>281
                     /note="ultra-conserved element locus uce-892"
BASE COUNT           72 a           60 c           77 g           72 t
ORIGIN      
        1 agagcaggga ggctgcctcc agcctgcgag ggctgtaaaa catggcagga gagaaacgtt
       61 atatttgtgt acatggggat tatcacggcc ctgccaggct actcggcttt agtatcaggc
      121 acactccgtt ttgtgcacag gctgatttag taaataagag ggcggataga tagcgcagat
      181 ggtttgaagt gtcgggtcag attatttcat ggctggatac agtagtaaag ttcattctga
      241 cggaaaagcc tgatattatt ttcacagacc ccccccccct t
//
LOCUS       KCHQ01000432             310 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 47555cha ultra-conserved
            element locus uce-592, sequence.
ACCESSION   KCHQ01000432
VERSION     KCHQ01000432.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 310)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 310)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47555cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>310
                     /note="ultra-conserved element locus uce-592"
BASE COUNT           66 a           59 c          101 g           84 t
ORIGIN      
        1 gtgtgtctgt gtatgtgttt gcgtgtgtgt gcatgtccat gtgtgtatgc gtctgggtct
       61 gtgtgcggga taatcctgga gaatctctct ctttgaaggg gaacagatgt agatttacat
      121 atgtggaggg tccccagcct gtgatgagat tagctggttg ggatctttct tcacagcaac
      181 tggaaggtgc atatttaata aatgcctgga gctaggctgg ggcgtgcagg gcttggccct
      241 cagagagcca caggacaaag gcaaacgagg cccatggcag gctggcccat atgggaacaa
      301 ggttgcttac
//
LOCUS       KCHQ01000433             217 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 47645cha ultra-conserved
            element locus uce-959, sequence.
ACCESSION   KCHQ01000433
VERSION     KCHQ01000433.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 217)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 217)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47645cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>217
                     /note="ultra-conserved element locus uce-959"
BASE COUNT           57 a           57 c           41 g           62 t
ORIGIN      
        1 tgtgcaaaat tgcactgagg cgagctgcca cagtattgag gaatagtgtc atatactggc
       61 aatttcctcc ctaggtgtca ggcatacttt accttaatat gtctgcagcg actcttaata
      121 aaacagtctt gtctatatac atatctctac cgcagcccgg cctgtgccac actgcacacg
      181 gcactcaata gcatgctgtt aaatatttac ctccgct
//
LOCUS       KCHQ01000434             575 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 47746cha ultra-conserved
            element locus uce-590, sequence.
ACCESSION   KCHQ01000434
VERSION     KCHQ01000434.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47746cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-590"
BASE COUNT          122 a          120 c          135 g          198 t
ORIGIN      
        1 ctctctccgt ttacctcaat tgagtttcca gtccttttgt tcgctcttct tatcacttgg
       61 aaaaaggtga accctcgtgt cgtttttatt ttaatctttg ctttaattgt agtttttacc
      121 cttgtggtcc ctgatggctt cgcacagtga tactctggtg gtgttctttg gggcaacagc
      181 tggtgcaaat gggggtaaac tgggttcgga tgagagggaa ataattctct tggtgtggca
      241 aattgtggat ctacatgaga aaaaggtatg gacctttttg acccgttcgt tcgttgtacg
      301 gtttcttgtg tacccagagt gtttgtggct tagtgtctac ctgtagtgga acagtatgtc
      361 tgacattcaa accaacacgg tgtgctcgtt tctcgtgcta gctaacgcta acttccatct
      421 aaacggccgt cttgctagct cacctttttt ccgcaggtgt gcgaccagat tttaacaagc
      481 aggtgaggag tgtgattcgc ctaatggaca cagcacacct ttttggtttg gcatgtcagc
      541 ttctcgatta taaaacaacg ctttattgac aatta
//
LOCUS       KCHQ01000435             306 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 47847cha ultra-conserved
            element locus uce-597, sequence.
ACCESSION   KCHQ01000435
VERSION     KCHQ01000435.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 306)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47847cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>306
                     /note="ultra-conserved element locus uce-597"
BASE COUNT           77 a           78 c           74 g           77 t
ORIGIN      
        1 accagattga tgtcattgtc tcggcacact gacctttgct gtaataccca cggcagacat
       61 cacaaactct cacatcaatt tagtccaatt ggatgtggca tgtcttggct aactcaattt
      121 gtggagaaat gcacctgtct ctgccttccc tccctataga tttactcaag gggagggggg
      181 aggaggtggt attgcaggga agagaaggga gagcgagggg agggttttgg agtggacttg
      241 gctgctgatc cactatcctt ccccttcttc acccccccaa aacactcacc cacatgcata
      301 taaaca
//
LOCUS       KCHQ01000436             343 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 47941cha ultra-conserved
            element locus uce-596, sequence.
ACCESSION   KCHQ01000436
VERSION     KCHQ01000436.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="47941cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-596"
BASE COUNT          101 a           84 c           78 g           80 t
ORIGIN      
        1 ggaatgagag ttcaaaggaa ctccccgcag cctatataaa ccaccctcaa ttggcacaaa
       61 gaggaaactc aatttgcagg gagctgcgct gtatactttt tatagaggaa cttttagtca
      121 ttaggccata tactccatct cgctcaaaga gccaggcgac gcggcaggag gccgcaacgt
      181 gcttcttcta caaaaaagca ggacagaacc ccccgactcc agagaagaaa aaattctctt
      241 aatgagagcc cagttagttc ctgtgtcttc agatggtgtc ctgtttgttc agcaaagcag
      301 ggggatctgt gttaaccctt cctcaacgaa atctgcttag aag
//
LOCUS       KCHQ01000437             654 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 48039cha ultra-conserved
            element locus uce-894, sequence.
ACCESSION   KCHQ01000437
VERSION     KCHQ01000437.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48039cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-894"
BASE COUNT          197 a          126 c          114 g          217 t
ORIGIN      
        1 ttaacctatg tagatcaatg tgcttcctta aaagagttta ataaattaaa gtgcaggggg
       61 cttttttttc ctcagtgagc agaaaaagct gatgagacag gtttagttta atctcaggca
      121 atagaagtca ttaaccattc tcccaggaat taaaatatag cttgcccttt tcttctctca
      181 cttatcatta gcatcacttt aatctccccg cgtttcacac tgctatttta atcattactt
      241 actgcctttt gacaactgaa gaacatggct tctccccgct caggcaatat cctgatttta
      301 gctgacaaaa tgtaggacat catttaaaaa tatctaaatt tcctcttcct tttttattct
      361 tctgacttcc actcttcaga ctcctgaacg tctgtctatt tatatcaaag aaagtacaaa
      421 aggcgagagg agattgagtg gacgacattc aaaatgtaat ttgagttagc tgcaagggta
      481 acgaaatgta caatacagtt tatttgtgcc tatcatgtta ttttaatgga tggcgaattg
      541 cacatattgc tctatgtggg tcatgtaggg tgttgggggt atatttgtct gcccttgaat
      601 caatgaacat ttacaacaga aaccacatat ctcccgagca gaatataaat aaag
//
LOCUS       KCHQ01000438             438 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 48119cha ultra-conserved
            element locus uce-594, sequence.
ACCESSION   KCHQ01000438
VERSION     KCHQ01000438.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 438)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48119cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>438
                     /note="ultra-conserved element locus uce-594"
BASE COUNT          135 a           93 c          115 g           95 t
ORIGIN      
        1 catttctaca gcttcatctg aaaaagataa acaacagcct cagccactgg aagaagaaga
       61 aagaaagagt tgcatggaga tgatgcgacc ctattaatgc cacattagtt gttccgtctt
      121 cccagaaaaa tgcttcggcg agatgagccg agagagcgag agggagagaa gaggtggagt
      181 gagagagaca gaaagaggga agtgaaagcg atactgtctc caggctagtt gggatgcaac
      241 ccaatttcac agcttcacga atgagtggca cagcatatgg atgcaacctt tgtgacagcc
      301 tctgtgtatc accacatatc agcgttgata ttccgagtca gattccatac tggtccaaca
      361 ttatgtcaaa caccggctcc gcatgactgc atttccaaca caacacacag acagtgtgtt
      421 tgttgggggt gtgagggg
//
LOCUS       KCHQ01000439             799 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 48154cha ultra-conserved
            element locus uce-17, sequence.
ACCESSION   KCHQ01000439
VERSION     KCHQ01000439.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48154cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-17"
BASE COUNT          208 a          177 c          177 g          237 t
ORIGIN      
        1 cccccattta ttccgcgcgc tctgagtgag ctttatcggg cctaacacat cacaacatac
       61 cccctccttt tttattttac ttagatttta ttttgcccac tcaaactttt cattttctga
      121 cagattgagg caccctattt aacagtttta ttcatctgtg cctgcaggca gggactgacg
      181 ttacagtcaa taaaaatggg agagctttgc aggcacctct tcttccccct tccctttgtg
      241 tgcaaagtgg cagccgtgaa tttaatcgag ggagaatgtt gtgattactt aatggtttcc
      301 caggcagcca tggactggag aattaaattc cgcatctgct ttccaaggcg ttaatctcct
      361 ctcctcacat tccgcctgtt atgatgtgca cacaagagat aatgtttaaa ccgactaaag
      421 cagggtaaac cagcgcaggc tgttattggc tttataatta cataattaac tttttgtttc
      481 taatcgttat ggaggtaatg gctctgctaa aacagggggc atctgctgag cagaaaaacc
      541 aaatcaaaaa tcaataatcc atagaatgtc attacagtaa gtgcttagtc ttgaatcacg
      601 agagagagac agaaagatgg tgcaaaaagg gagagcaggt ttgtctcccc tcttctccct
      661 tttcttttcc tttcctcctt ttcctgtgca gtaaatgaat ctcatttgga gatgagagtg
      721 ttatctgtgg gagaggaggc ccagcagctg tggggagcag cagggtatca ggctctgcca
      781 ggtgcatggc aggagagag
//
LOCUS       KCHQ01000440             642 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 48223cha ultra-conserved
            element locus uce-16, sequence.
ACCESSION   KCHQ01000440
VERSION     KCHQ01000440.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 642)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48223cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>642
                     /note="ultra-conserved element locus uce-16"
BASE COUNT          173 a          145 c          154 g          170 t
ORIGIN      
        1 gtcaaataca aacaaggggg ggagaaaaaa aactgcatgt cacttttaat atgttaagaa
       61 tccaggcgcg ccctcgtttg tgtgaccgcg cgtagcccct ggccacctta aaacgaagtc
      121 tccctcggag ggtaaacgag tagcgtccaa ttttgtctga gtgatatcca aatgcagaca
      181 gaaagggtcg ttttatcatg ctactatttg tcgtgacgat gcgattttca aaagcagagc
      241 ggtgtcataa agtgacatgc ctgccacaag tgctccaact gatcttttca attagcctcc
      301 catgcatgat ccgaggcgac ttccgcctat ttccagaaat taagctcaaa cttgacgtgc
      361 agctagcttt attttaaaga caaatgtcag gcaggctcat catattttcc ccctcttcta
      421 tatttggagc ttatttattg ctaaggagcc tctgctcccg gagtcaatgt accgggcggc
      481 agcgcagggg aagggagcgg agaagcacag agcagctcag gcactccggg gagtcagctc
      541 tcccatttgg cttcaggttt gcgggcttat tctgtgcttt agagagacgc tatggaacaa
      601 tttaaggata atttgcaaaa agcattcttt ttagataata ag
//
LOCUS       KCHQ01000441             209 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 48474cha ultra-conserved
            element locus uce-12, sequence.
ACCESSION   KCHQ01000441
VERSION     KCHQ01000441.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 209)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 209)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48474cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>209
                     /note="ultra-conserved element locus uce-12"
BASE COUNT           47 a           54 c           40 g           68 t
ORIGIN      
        1 gtttttctcc gttgtcttgt ctctcccttt tcttccttgg ctgcttttcc cactgcctcc
       61 cccatctgca caggccatcc aaggagtcat gtaagtatac ctttgtccct gcatgggagg
      121 aagaagaaat gatctggtat taaatttcaa taacacgttt tcccaggtcc tccagagtac
      181 aagcaatcaa gggttaaatt ggatctgta
//
LOCUS       KCHQ01000442             307 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 48534cha ultra-conserved
            element locus uce-11, sequence.
ACCESSION   KCHQ01000442
VERSION     KCHQ01000442.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 307)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 307)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48534cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>307
                     /note="ultra-conserved element locus uce-11"
BASE COUNT           81 a           61 c           59 g          106 t
ORIGIN      
        1 aggccctttg tgatttatac cgttattaca gcactctctc tctcacaata gaaatgatgc
       61 atgaatcaca tttgtactgt aagacaaatg tttctccaag ggaaagagag acattgtagc
      121 tagttaaagg gaccctcatt aagctctcgt tattggataa gtggctctca ttttctctgt
      181 gagattccag gcctgactaa ctggtcttta taactctctg aagattacag tgttgcattg
      241 ctgcagtgtt aatttgttct ttgtgatgta accagcagtt acgcatttat tttcagtgtc
      301 caaatcc
//
LOCUS       KCHQ01000443             224 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 48603cha ultra-conserved
            element locus uce-10, sequence.
ACCESSION   KCHQ01000443
VERSION     KCHQ01000443.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 224)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 224)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48603cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>224
                     /note="ultra-conserved element locus uce-10"
BASE COUNT           61 a           56 c           52 g           55 t
ORIGIN      
        1 aagctacagg agatccacgg ccgaagattg tgtggaacaa gaaggggaag aaagtcagca
       61 accagagatt tgaggtatta ggtctattgt tctgatgtaa aatgctcgac aaaattggaa
      121 tgcttcagca ctgctttggc tctgcctgca cataatccat ttcgccaagc cccgctcgct
      181 tacttttcgc cccgacttgc caccacgcat tagcaggctc taat
//
LOCUS       KCHQ01000444             247 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 48683cha ultra-conserved
            element locus uce-386, sequence.
ACCESSION   KCHQ01000444
VERSION     KCHQ01000444.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 247)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 247)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48683cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>247
                     /note="ultra-conserved element locus uce-386"
BASE COUNT           70 a           48 c           62 g           67 t
ORIGIN      
        1 tatttttgca gatgagtctt gttgttcttc cattaaaaaa agcagataaa aaaactgtat
       61 ggacccggca atcattgcca aatctgaggt tgctcaggca acctgaaaat gcttcctggg
      121 tcaaaaggtt atttggcatc tcagcctagt taagaaatgg gatcaggggt caaaaccgtc
      181 agcctcttta catctcaggg gtgctgggga ggggctgccc taatagccag attgagtttg
      241 aaggtca
//
LOCUS       KCHQ01000445             443 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 48782cha ultra-conserved
            element locus uce-387, sequence.
ACCESSION   KCHQ01000445
VERSION     KCHQ01000445.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48782cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-387"
BASE COUNT          136 a           89 c          111 g          107 t
ORIGIN      
        1 gacattttca attacactgc aaacaactta tcaatatgca tggatttccc agccaatatc
       61 agagcaaaca gagtcgtttg gagagccgag tctgtcaggg gagagaaata gggcagacat
      121 gtcaaggtca ggattttgtt aatgagggac gggccgctga ataattgaat gggctgagca
      181 gtatcgacta ttgaagcaga agcgtttaaa gcgttggcga tcgttaagga aaatcctccc
      241 agcactttat gttccatggc agtaatttat gcacgggcat ccaagcgggt gccctatggt
      301 tcacagcact gaatgcacaa agcaatgagt ggattagcca agcacactct agaaacagca
      361 gccaagcgtg caagtcattc ctgtggatga agtaatgact ctggcagtgc aattattcag
      421 ctgtgcattt taaatacaca gat
//
LOCUS       KCHQ01000446             481 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 48856cha ultra-conserved
            element locus uce-1314, sequence.
ACCESSION   KCHQ01000446
VERSION     KCHQ01000446.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48856cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-1314"
BASE COUNT          117 a          110 c          129 g          125 t
ORIGIN      
        1 gtgtgtgtgt gtgtgtgtga gtgcacgtgc ccggctcaga gagtgtatgt gcacggcaga
       61 cctgccagac cccgctgctc agtgtgatgt aaattgtgta tgtgtaaaaa gcactccata
      121 atcaggccat ccatcatcag aggctgtcag tgggctctct cagggtgata catcacgctc
      181 tcctgtcctc tgcctcagct ggggcctaca caacccgcca ggcatgctgg gaacacagcc
      241 ggagagacgt acagtacagg acgagaccta ggttgggaga ggtgttcttt ttgatgtgcc
      301 tttccaatga taatgatgcc ctactgtaaa tgcagaccta agaatgatga tgaatgtggc
      361 ttggagggta gggtatcctg tacccttaaa gaacagttta aactgcattt tatcagtgtg
      421 tttcacattt tctgcacagc gccaaatgcc tgcatatgga ggcacttaaa tgtgtcaaac
      481 a
//
LOCUS       KCHQ01000447             439 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 48961cha ultra-conserved
            element locus uce-383, sequence.
ACCESSION   KCHQ01000447
VERSION     KCHQ01000447.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 439)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 439)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="48961cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>439
                     /note="ultra-conserved element locus uce-383"
BASE COUNT          123 a           92 c           84 g          140 t
ORIGIN      
        1 cgttagatcc ctcagataac acgtgttaag atgtcaatat tgtattagaa gccaatgttc
       61 tcctatgtcc ctctatatca ttattacagt agaatggcag tagatttgat ttctattgtg
      121 gagaggagtc tatttttacc ctacagtaaa aaatgttttt ttcactggct gtagcttgtc
      181 atgtagatta tagcaccccc atttgtccct cctccctctt ccaatgggcg cagaaaggat
      241 gagtgttgtc attacagaca agcaagcaag gtgaaccttt cctagactgg ggaccttttc
      301 ctggtacaca gaatcagaac aacccctcgc tccacctcca tataatccct ggcattttgt
      361 tttgatgctc cacagcatga aaatgaggga atatggtgat gttatggcat ttgaagtcaa
      421 tatgtattat aaaatcaat
//
LOCUS       KCHQ01000448             332 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 49051cha ultra-conserved
            element locus uce-380, sequence.
ACCESSION   KCHQ01000448
VERSION     KCHQ01000448.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 332)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 332)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49051cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>332
                     /note="ultra-conserved element locus uce-380"
BASE COUNT          101 a           73 c           79 g           79 t
ORIGIN      
        1 acacaaaatg agaaaatgat caggttcaca agcagcgagg ccaccaaatt tgtcgttgtg
       61 tagaagaacc cctcattacc gcacctcatg ggcactcggc gtggcctttg aagtgctttg
      121 aggtacatca tcccatgaaa cgagcatagt taatccactt gttaatcaag tgtgctcatg
      181 agcttatgtc tgaagtggct ctttctcctc ggaagactca aagcgttcaa aggaaattgt
      241 ggcggggcgg aaagacgagg tatcgaaaat ttcagacaaa atctgagtgc agcagtgtca
      301 aaacaagcac aatatcccaa atttgttgcg cg
//
LOCUS       KCHQ01000449             566 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 49138cha ultra-conserved
            element locus uce-1071, sequence.
ACCESSION   KCHQ01000449
VERSION     KCHQ01000449.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 566)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49138cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>566
                     /note="ultra-conserved element locus uce-1071"
BASE COUNT          126 a          174 c          101 g          165 t
ORIGIN      
        1 ccccaacaga ctaatcttaa caatacatcc ctccagctaa ggagatgact tgattttctc
       61 atcaacagta actcctgggt ttttttgtcg actttttacc gacgaccttc ctctaaaatg
      121 gctcgatttg aatatccaac cagcaaacat atctcgattt aaacaaaaca aagtgttgat
      181 gagggaattg gaagtccaat cttcctgatc acggcaggtg tgtttggagt tgtacctgta
      241 ggtggggcga cgtaggtttc ctgaccccac ctacgcttct cccaaactct accgcgcctc
      301 cttgtgcctg tcttgtcttt ctccatttct ctctgagtgt gtccgacctg gcaagcttcc
      361 ttctctcttt gttccacagt gacagtcctg atggcaaatt gatttcgact gtgtgagaac
      421 agacatacag acagacacag acagctccgg atagcacagg ggcctcttcc tccccatctt
      481 tccctcctct tagcctccct cctgtccact tatctccacc tctcctcctc ctctgcctcc
      541 acatacaccc cttctccaag tggaag
//
LOCUS       KCHQ01000450             350 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 49322cha ultra-conserved
            element locus uce-875, sequence.
ACCESSION   KCHQ01000450
VERSION     KCHQ01000450.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 350)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 350)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49322cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>350
                     /note="ultra-conserved element locus uce-875"
BASE COUNT           99 a           78 c           99 g           74 t
ORIGIN      
        1 gaggggtgtg gggcgggggt ggctgactgc cgtgcctgag cgcatgctaa gagatgatgg
       61 atggcctagt cgatatgtta tgtcttaaga gcctgatttc ctgccagtcc aatcactaac
      121 cctccagagc ccagctcagc tgattggaca accagaataa tttcgcaggc tgtgaaaaca
      181 ctgctgccgt gcctgtctgt caggccctgt gacgagactc agggatttta aagagcaagg
      241 gcctccccaa gattggttat ggtgaacgaa ataataacaa taaccagcaa gactaaacaa
      301 aagagcaagc acctccggga gagagagatc gtgcagaatt attggaatga
//
LOCUS       KCHQ01000451             355 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 49360cha ultra-conserved
            element locus uce-876, sequence.
ACCESSION   KCHQ01000451
VERSION     KCHQ01000451.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 355)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 355)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49360cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>355
                     /note="ultra-conserved element locus uce-876"
BASE COUNT           90 a           82 c           70 g          113 t
ORIGIN      
        1 atctaaatac agtgtctgct ttccactgtc agtaagtcaa agagagcaac gagcagtttc
       61 cagatttgtg catcaacata ggagtccttt ttgtttttgt gcaaatctca taacactttt
      121 ctttaaaacc cggataatcc aattttgcat gccaactgca ttcctctgtt ttagctacgc
      181 agtcgaaata actgtgagaa atgtcccctt ggtctgactt ttattcctca ccttattccc
      241 aatgtcattc atttgccact gaaggtaaca agccttttcc actcggtgct ctgtaacggc
      301 agacctttaa tagccatttc ccggtgtggc gaggggagag agggggaaca tgttt
//
LOCUS       KCHQ01000452             489 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 49679cha ultra-conserved
            element locus uce-872, sequence.
ACCESSION   KCHQ01000452
VERSION     KCHQ01000452.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49679cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-872"
BASE COUNT          117 a           83 c          107 g          182 t
ORIGIN      
        1 cgacatatta aacagagtat tatttttttt atgtctgtgt gcattgtgtc tgtgtaagca
       61 tggcgtggtg taagcacaac attaggagag aatgtttatt gtaatgtgag tgtctggtgc
      121 cagctgagct gagctgcaag ctgtttggag aagcggatga ctgtttgatt gtgtgatgac
      181 aatgtgagcc ttgcatctct cttcctttcg tctgtgtctc tgaagaatgc tgacattaaa
      241 tgtttgatgt tggcatgcac gactgatgta caaataaaaa cctcaccggt gagagatgtt
      301 ttttttttct tcttgcattt tgacaataca tttgttgttt ctgttgtttc cagattcgat
      361 tcaagtttac cttttccccc tttttaaaag tttgggctgt tttatctctt tttttcttcc
      421 ctcttgaacc agaaagtcac cagaattgag gagcaaaaac tgaaaattca ctgaggttcg
      481 catatgact
//
LOCUS       KCHQ01000453             208 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 49768cha ultra-conserved
            element locus uce-350, sequence.
ACCESSION   KCHQ01000453
VERSION     KCHQ01000453.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 208)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 208)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49768cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>208
                     /note="ultra-conserved element locus uce-350"
BASE COUNT           56 a           34 c           62 g           56 t
ORIGIN      
        1 attaataaga gcagtaataa acaaaggccc aggagatgtt tgaggtgctt aataatgcat
       61 tatgttcata aaagagctgg gcctctccaa ctgatccctg tggagtagga gaccccagag
      121 ggaccaggag agagtgtgct cttaaaagac agcaactgtg tgtgtgtagg aatgtctgtg
      181 tgtccgtgtg tgtgtgtgtg tgtgtctc
//
LOCUS       KCHQ01000454             847 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 49811cha ultra-conserved
            element locus uce-87, sequence.
ACCESSION   KCHQ01000454
VERSION     KCHQ01000454.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 847)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 847)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49811cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>847
                     /note="ultra-conserved element locus uce-87"
BASE COUNT          258 a          164 c          187 g          238 t
ORIGIN      
        1 agaaatccgc ccacatgaat attcatgcag ggatgttagg tggctagctg tagaccagac
       61 tgggtaccag caaatagttg gccaggtgca ggttgtgaca ctgatttcca acctctcttc
      121 gtcttccact tctatactgt gtcactgttc acgtgtcatg acacagtgca gtgaagtgtg
      181 ccttgatcaa tcttgtgctc attgaagaag gaaaggtgaa aattatacct actgctttgt
      241 acagttgtgg aatgacatat ttaggagatt aggataactg tgtttgcaaa atggattaat
      301 tctagcagat gccaggacta acccccactt atctgtgata aggtgaccag atgtctcagc
      361 ttggcaaagg caacactctc cgagttttat tactcggcgc caaagcatcc cccgagaaat
      421 ttctctgtgc attcacagat aatctacctt cacagagaac aaggcgacag ggttttgctt
      481 ctttgtgtat ttgtccatgt aagaatttat gtggacgtgt tgcctggttg tagaaagctc
      541 aagaagatta aactaaagta aatacctttg ggcctaagtg ccagcaaggc gagggaaaaa
      601 agatagcgaa cgcaagtaga ggcttattgg aaatatcacc ttggcgtgcg tacgttacaa
      661 tgatgtttcc caatagagaa cagcaaagaa atcattttca gacatctaaa atgagctctg
      721 gtccattcgt ttctcaatag gaatcattga ctcatatttt gtacgtatgt taaagagtga
      781 gagacagcaa gagtgactta tttaatatta catcaagata aaccgcatca ttttcaaaaa
      841 acaggaa
//
LOCUS       KCHQ01000455             378 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 49878cha ultra-conserved
            element locus uce-268, sequence.
ACCESSION   KCHQ01000455
VERSION     KCHQ01000455.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 378)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49878cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>378
                     /note="ultra-conserved element locus uce-268"
BASE COUNT          118 a           68 c           91 g          101 t
ORIGIN      
        1 cagtttcctg attgttataa tatcagtcga gtaccagcgg caagagagaa atcacaatgg
       61 agccgagtgg tgacaaccaa acccaacagg caactgtatt cccgccagta tgggtttatg
      121 tttcataaag gaataaatag gatttgtgta gattgcaggg gagaaattgt tgcaatgcat
      181 cagtgtgaat gttctaacag tttcttatta ttagaattta aatgactttg gtacagtgct
      241 tctgtactcc tgatacttat caagctaatc ccactctcct ctcaaattca cactcctagc
      301 tactttaatt agcatagtgc cagtctggaa ggcaagcagg gagggaatca gagagagggg
      361 aaagaagagg ggaaggag
//
LOCUS       KCHQ01000456             646 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 49976cha ultra-conserved
            element locus uce-879, sequence.
ACCESSION   KCHQ01000456
VERSION     KCHQ01000456.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="49976cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-879"
BASE COUNT          191 a          115 c          129 g          211 t
ORIGIN      
        1 tctctctctc tctctctctc tcttgccttt cgtctttcgt ctctgggagt atgggtgcat
       61 gtcaagtgat tgttgaattg aaatattgat gtggagtatc aaagcgtggc gtagcactcc
      121 tgtgtttcca gaactaacca cgaagcgctt tgatcagata ctcctgtgat ctgacttctg
      181 aagttgttaa gagtgctgga aaacaaaatg caaacaaact tcaagtgctc ttggtattga
      241 taaaagtttt ctttgacaag tggagaagcg tgctgtctgc ctgtgtctgc ccaagactgg
      301 agattttggg gttttcgtac atgctaatgg acaagagatg agggaattat gatagttttc
      361 tacttctcat acacctagca atgtaaactg tagtacagca gcgggaatca tcacagattc
      421 ctgctgtgat atcagggatt ttaaaaacta ctgtgattct gtgatttatg ctttaatttt
      481 tatctatgcg taaaaggatt tatcatttaa tttcaagtgc aaactaagaa ggttaattaa
      541 agccttaaac gaaatccctt taagcaatta aaatgctatc atgcttataa gcaaaaatga
      601 agtcattaat tattaaccaa ctaatagaca cgttatagac cgaatc
//
LOCUS       KCHQ01000457             268 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 50083cha ultra-conserved
            element locus uce-1098, sequence.
ACCESSION   KCHQ01000457
VERSION     KCHQ01000457.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 268)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 268)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50083cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>268
                     /note="ultra-conserved element locus uce-1098"
BASE COUNT           94 a           36 c           67 g           71 t
ORIGIN      
        1 cttttttttt tttccctgaa atacggttaa tgaaagcaga ggaagggaaa tggaacagag
       61 gtgagtgaaa gaatatatta aacactgaat ggagagatag aggaaaaata ttcctcattc
      121 gcagccttca gaatgtgtta ttagggaatg atttcaacag gcccttagta gctctcatta
      181 gatggtgtat caaaccagaa caaaactcac ttctcctaac tatgtggagg aagtggattg
      241 gaaaattaaa tggggagagg agagtgag
//
LOCUS       KCHQ01000458            1005 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 50181cha ultra-conserved
            element locus uce-624, sequence.
ACCESSION   KCHQ01000458
VERSION     KCHQ01000458.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50181cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>1005
                     /note="ultra-conserved element locus uce-624"
BASE COUNT          348 a          163 c          204 g          290 t
ORIGIN      
        1 ccctgtgtgg aggggaagcg tgtgggggga gggacgacgt tttgatgagt tggtgagggt
       61 agaaaaaaat agagtctgat ctgtcattac accatcaatg tgatggaaac cacccaaaac
      121 atttgtacca atcaaataag atgtatgatt aagacaatgt ccatttcaat cttcacaaaa
      181 aaacccacac atttaaattt ccatacgcta acatttagcg tggtaaaaaa tgagggcagt
      241 gccttcctgt tttttttcct cctctgactt tttaatcaaa taatttacaa actctataaa
      301 taaatgttga gcgaggcggg ggaagaaaaa gtataaagga ggagaaaaaa tggacggtga
      361 gttcaaaaca gctcatcaaa aaacaaacat ctctatatat ctggcacgac acccagctac
      421 tgcttcatta tattaatttg tgagaggtgc agtgaaaatt acactgtatg aaaaatggct
      481 ggaaaattta aatgatacaa actcatctta ttagcggtga aacattaaaa aacaaacagg
      541 cccctccgtg tcccgctaat ttgtctttgg atgaaaggcg tttgatggat ggatcttacc
      601 ttattcataa gcgaggataa aagagatgta ttccctggta cagggtgtcc atttgattca
      661 ttactggaac aaggaaaatg aacaatgttt agtcaagatt tgcatgagaa cagtaaatat
      721 tactatttat cacacaaggt gtgcccgcat aatgaagaag aaaaatgctg tcttcttaag
      781 aaataagatc tactgtgagt tggagggaaa attggagttg aaggtttata taaacatcct
      841 tctctcacaa aacctgagaa atatgttgtg cattttctaa ttgtatgcac aagtatatca
      901 atttgatatt tttgataaat aattgtgaat agaagccagg ctgccaagaa cgtaggaatc
      961 atctatcaat cagagaaacc ttatttcctt gttggtttac ttctg
//
LOCUS       KCHQ01000459             346 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 50352cha ultra-conserved
            element locus uce-626, sequence.
ACCESSION   KCHQ01000459
VERSION     KCHQ01000459.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 346)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 346)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50352cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>346
                     /note="ultra-conserved element locus uce-626"
BASE COUNT           87 a           90 c           78 g           91 t
ORIGIN      
        1 ctaactagct gaactcctct ctgctgagct gtacctcatc agcacgcatg atgtctaccc
       61 aggtcgatac ctttgtgccc acaagcatag ttgaagtcaa tggaattttt attaggaaac
      121 aataatggga ggaggggggt gtgaggtgca gaaagagaga aagcgaggtg tagggagagg
      181 tagtacattg atttaccctt catagttcat tgcactacat ttacccagca gagtgctcaa
      241 attagtgccc tccagctctc tcccaattag tttccacaga gacgaggtgt aaagccagtc
      301 actggcctca ttacctctcc tctctccgcc tctcgctccc tctctc
//
LOCUS       KCHQ01000460             492 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 50427cha ultra-conserved
            element locus uce-188, sequence.
ACCESSION   KCHQ01000460
VERSION     KCHQ01000460.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 492)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 492)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50427cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>492
                     /note="ultra-conserved element locus uce-188"
BASE COUNT          138 a          110 c          106 g          138 t
ORIGIN      
        1 ctgctgctcc ttctccatgt tctctagaaa taggacacga gtaaccgctc tacaggaaca
       61 gcgtaacatg gccgacgttg gcagccagaa gtgcttacat ggcaatacac cactgtgtgc
      121 cctcggtcta tatggaagtg gattgaacac atgtattgac ttacagtatc ggggtataaa
      181 catagggaaa tgtttgagca aagcagtaaa ttcaagggaa attgttcctt gttaagtcta
      241 tgagcctgaa tggaggctcg cacagagtac tagcattcct gccagccatt acagcttatt
      301 acgataactc tatctttcca ggagataaaa acctagcctt gttgccattt gccagctatt
      361 actttcgcta attatactta actgcttcga gcttatctcc actcctccta caccattgag
      421 cagttatttt tttctttccc ctcaacacaa attagaggtg gagtgggagt tggaaagggg
      481 gagacagata aa
//
LOCUS       KCHQ01000461             703 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 50695cha ultra-conserved
            element locus uce-622, sequence.
ACCESSION   KCHQ01000461
VERSION     KCHQ01000461.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50695cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-622"
BASE COUNT          183 a          153 c          158 g          209 t
ORIGIN      
        1 ccatgcttaa tgaaacaata ttcccaagat ttcccaaaag ggatttttaa taagatctta
       61 attgtatttt gtggattttc tttttagcat ttcatataaa attatggtat aaatgatgga
      121 ttaagctcct ttaaatatta gttttattat tttattatca gtgtgaacct tcaccagatg
      181 ttttcctatg ggatgcacct gcgtcactat cagtaagttc catttccaca tgctcacatt
      241 gttcatttcc tcgtggggaa taaatagggg gtggttgtcc agtcgatatc tttaatcgct
      301 cgcgggctgt atcaatacct accggtttta ctgctccatc acgagccact gggaacgggt
      361 tgcccgggaa acggccgcat ggcaacagga tcagagcctg ggggttgtct gcttctaggt
      421 ctgctcccat tttacatcgc atttcctcac tagatggtgt gcaagccact ggagagtaca
      481 cttccccgca cagtgggctc cacagccagc aaaacaaacc tgggaaacta tacggcggac
      541 catttcttta cggggctcca aggaggaaaa gtgtggagat aaagcgtcgc tcgcgtcgag
      601 gttttctctt ttttttcgct aaccacacgc tttttgcaag aagaagactt gggaaaagcg
      661 gcaacaaaac acagctgtga tggacataat gattgcggtg cag
//
LOCUS       KCHQ01000462             597 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 50788cha ultra-conserved
            element locus uce-1126, sequence.
ACCESSION   KCHQ01000462
VERSION     KCHQ01000462.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 597)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 597)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50788cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>597
                     /note="ultra-conserved element locus uce-1126"
BASE COUNT          178 a          107 c          126 g          186 t
ORIGIN      
        1 ccattcattt caatgttatg tgctgaaata ttgttgtgat gcattgtcct ctattttggc
       61 ttttaagggg aaaacagaac atctaaaatt agcttcagaa aatggtgaaa gagaacaaac
      121 aaggcgatcc attagtgagg atgggttatt ggctgacttg cctcttctca tggcggccca
      181 ttaaaagtgg taatgtctgc ctgcagcagt gcctggggaa gaagaaggag gccatggaag
      241 gcatatttca catgcatcag acactggaat taaatagacc aatgttccct aaaaagactg
      301 aagtacatct ctttctgatg tgcgtcccgg gcaaaaattc attgatctta gaatgtccct
      361 tggcaattat aaaatattaa atccaagtcg cacttttcgg ctcggcttaa tttttttttc
      421 ctcgcttttc actgctttcc atttgaccaa tttagaaaaa aaagttggaa atggatggcc
      481 atgaaaaaaa ggcactgata ataaagactg tgcccctttt agatatcttt tgttatgttt
      541 ctgtattgtt tttgtggaac atctcagatc attaaatggg atgaggtccc agcaaag
//
LOCUS       KCHQ01000463             270 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 50967cha ultra-conserved
            element locus uce-187, sequence.
ACCESSION   KCHQ01000463
VERSION     KCHQ01000463.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 270)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 270)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="50967cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>270
                     /note="ultra-conserved element locus uce-187"
BASE COUNT           67 a           60 c           66 g           77 t
ORIGIN      
        1 acgaagctgg cgtttgaata gagccagtca gcttaatctg accacatgac atgtttgatt
       61 ggtcagagct ggggtgggtg ggtacaggcg gttggtgtgt gaggagcgtg gccctctcct
      121 gtggcagtgg agaacaaaca taaatcttct tcaacaatct attttccatc atacttattc
      181 acaggggaca tctcaaagtg gtctttaccc tttctgtcaa tggctgccct catccatcaa
      241 tttcatagag aattataccc cagatcgatg
//
LOCUS       KCHQ01000464             922 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 51066cha ultra-conserved
            element locus uce-180, sequence.
ACCESSION   KCHQ01000464
VERSION     KCHQ01000464.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 922)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 922)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51066cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>922
                     /note="ultra-conserved element locus uce-180"
BASE COUNT          276 a          172 c          256 g          218 t
ORIGIN      
        1 tgatggagtg cagtgagtcc tgagatgatt agaaaatgga tgttgacctc agttgtcccc
       61 attttggcca ccaccattga tcacaccacc tccttcctct ggcggcatga aaaaactctc
      121 atgattagag ttttatcgct gcaaccgtgt cccagtttga ccagaaagaa gagagaagaa
      181 agaggctgag aggcagaaag aaagagagag attaagagga atggagaaag agagagaaag
      241 agtgagtgag agagagagag ggagaagctt ttaaaaggat tttgtcggtt attgactggt
      301 tgcactcttc agctaatagc catttaaaga ttatgggcct gctggtggaa atcaaggcct
      361 ccattgtttg ccttattgca ttctggcaga tgggggctga cacaacaaca cgcagcatcc
      421 ctccgggcac gctcgccgag caccgaccct ccatcagcag atctcctatt gaactggccc
      481 taataactgg ccatgaatta ttaatccacg taccatattg aagacagaga gggaagagga
      541 aaaaacaagg gaggattgtg ggccggtttc agcgagtgtg attggcgtac aggtgccagt
      601 cgaaggaaaa aatgtccgtt caaaagagtc ccagggcggc catttctcgg aacggggagg
      661 acattccgat aactggcacg ggaagataaa atatatattc attaaatgtc agattgctga
      721 tgaaatgggt ccgatccatt agtgggtagc ggagcggccg gttaatgttt cccggttgtt
      781 cttgggttgg gtggctttta gtgttgctct gggttgctgc tggaaacaag atcactcgat
      841 ctggaaaaaa aagaaaagtt tgtaagagta agagcaggtg ttgttcaaaa taaaagggaa
      901 acactttgga aatctgactc aa
//
LOCUS       KCHQ01000465             264 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 51250cha ultra-conserved
            element locus uce-1120, sequence.
ACCESSION   KCHQ01000465
VERSION     KCHQ01000465.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 264)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 264)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51250cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>264
                     /note="ultra-conserved element locus uce-1120"
BASE COUNT           65 a           77 c           47 g           75 t
ORIGIN      
        1 gaatgaagca atattgtaac ctcaacctat atggcacttt cccactgtgg gttcagccaa
       61 tgaattatcc cctccaataa atcctgtttg gaggataatc cttttcccat cttctggaca
      121 gatactttct gtaatgaaat ggccccaggt ccttccctgt aacccagtcc catcccgaac
      181 ctctaacttt gcctgtctca ggggaaagaa ggacttacag tgtggcttca accccactca
      241 acctctgctc agcttcagtg gctt
//
LOCUS       KCHQ01000466             666 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 51606cha ultra-conserved
            element locus uce-746, sequence.
ACCESSION   KCHQ01000466
VERSION     KCHQ01000466.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 666)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51606cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>666
                     /note="ultra-conserved element locus uce-746"
BASE COUNT          223 a          156 c          116 g          171 t
ORIGIN      
        1 acacacacac acacacacat acacacacac acacataagc acatagacaa agcagcagat
       61 gaatgtacac gcacacatgc acacgctttg tgtccattag ccaaagccac tgatacacag
      121 cataatggac atggctgatg tgctggtgaa tatgggaaga tgacacagat attcctcttt
      181 gtagcactga cctgctgcag tgaaaggctg ccaagcgtga tcatgtcagg ccgcacacgc
      241 tccctcagct gctgggcgta gtgggggatc acctccttag ctgtgctcac tgcaagaaat
      301 aatgcaatgg catcaaactt tgttgtattt atcaaaaaca aaacgttact gcagcatcat
      361 gcatgcattc tttgtgtagg tattatcatg tcactccagc aataaatgtg ggatttataa
      421 ataaaataat gagcatgaga caaactattt aacaaaaatg tggacacttc ctggaatgat
      481 tcctcgcaag ctttaatgat tgattttata tcatgcaagt gcaaagaaca tgcattttat
      541 accatcataa taatatactg ctaacacagt gcctctccct ataagaaatc aaatataaaa
      601 acaaataaga gaatagcatt actttttaca gcactctctc tgcccattac catcctccct
      661 gcttca
//
LOCUS       KCHQ01000467             844 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 51839cha ultra-conserved
            element locus uce-745, sequence.
ACCESSION   KCHQ01000467
VERSION     KCHQ01000467.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 844)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 844)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="51839cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>844
                     /note="ultra-conserved element locus uce-745"
BASE COUNT          210 a          176 c          184 g          274 t
ORIGIN      
        1 cacaatgtat catcggacgt aattccatac agcgcacccg gcttcattta attttaaaat
       61 atcaaattgt ttttctccac agtcacctga tttcgtctgc caccgtctgc gtcattttcc
      121 tctctcgtct gtctaaaact ggcacttttg ttgcattccg agaggttgat aaatcaatcc
      181 atcaaaaaat tctttgcggt gaaactcaat caagaaaggt catgtcggcg ggaaaagaac
      241 agattaaatt agcattgaat tagacatgga aagtgagctc tgtcaaaacc atcactgtgc
      301 tcagcacaat tagaatatgt taattatgca tttcattaag gggcctcagc gctctttgaa
      361 tgtgagatga aatgtcactg gtgtaggcag ccgaaaaatg gaagattgcc aggcacaact
      421 ttctttgtgc aatgtgtgac accttcatta acatcaggga ttgctagtct gattagactt
      481 tttgtattag tttaagcctt taggctttca aatgctatgc cttttttttt cctccgtttt
      541 gatgtggcag ctaagaccct tctccatttc caagcagata ttgtctatgg ttcaactctt
      601 tgtttaaatt ctccgacaga atgccgtgac attgggcgta acatctcatt gtctttgtgc
      661 agatgacggc atttgctggg tctttgtttc tctgtaatct tgggtcactt tcagcgatgc
      721 gagacttgag gagtcccaaa ctgtgcgctc agattgggga tattcagggt ggcctttgtg
      781 ctgatgcaca cggtggcgac agacacggtg catggtcggt tgtaatcgcc agttttggct
      841 ttag
//
LOCUS       KCHQ01000468             632 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 52023cha ultra-conserved
            element locus uce-740, sequence.
ACCESSION   KCHQ01000468
VERSION     KCHQ01000468.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52023cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>632
                     /note="ultra-conserved element locus uce-740"
BASE COUNT          169 a          134 c          172 g          157 t
ORIGIN      
        1 cccaaagtct gcatggataa gcggcagcca ccagtatatt tttctaagaa ttataccaaa
       61 atgatgctgt aactgaatga acctatcagc gcatccgttg aatgcccccc actcgtaagg
      121 ttctgggtcg gagcggtgga tggagacagc ttgacgacga acgcgaaatg aaagatcatc
      181 caccgacaag agacgtgtag ctacagacca ggcgagccga gctgacgttc tccaaccttc
      241 cctcctgccc gccatttgtg aaggatttgg ggatttcata atttcctgtt ctttctgaaa
      301 gggggatggc agcacctggt ccacacagct gtacttcatt tagagagcaa tttgaaaaga
      361 gcgaggggga gaggagagga gcggagcagc cttgtcatta agggctccag aatggcctgc
      421 gtttgttaga cacatggcac agagttaatg ctgctgaata gggaataggc gctgttgatg
      481 ctgtcacaaa tttctcataa gtgctacgac atctgaaaaa gccactccaa gtgcagggag
      541 gggggaaatt caaattttcc ttatcaaaga gggttttttt gtaggtaatt gacagctgcg
      601 gctgggatgt aagcgtgtgt ttctgtctgt ta
//
LOCUS       KCHQ01000469             518 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 52279cha ultra-conserved
            element locus uce-1316, sequence.
ACCESSION   KCHQ01000469
VERSION     KCHQ01000469.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52279cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>518
                     /note="ultra-conserved element locus uce-1316"
BASE COUNT          118 a          164 c           71 g          165 t
ORIGIN      
        1 attcttgtct tgacatctta attctcagtt cttgtgtgtg gtcaaatcag cctactatag
       61 aaaagcaatc aagcaattat tcccaaatta tatttgccca acacacactg attggttatt
      121 cttttcttat tgagtaagct cattaattct gagcagcttg cttgttatgc ctctgccatt
      181 actcctttcc cctctcatcc cctctctctc tctgtctctc tcaccccttg ctcttcatca
      241 tgcacactca ctcccagctc tcactactcc cccccccaca cccccaacac acacactcct
      301 ctttccttct ctctccaaca gatgcaccct atcttccagc cccagcccgc tgatgttttg
      361 gagatgacat acactacaaa agccccatga tctgtggcat tgtctagtcg gccaattact
      421 attcccatct ctgattaact ttgatgtgga acctaatgag ataaggcagc ttatcaaggc
      481 agcagctgat agtggtctca tttattccca tgcctggc
//
LOCUS       KCHQ01000470             208 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 52411cha ultra-conserved
            element locus uce-1162, sequence.
ACCESSION   KCHQ01000470
VERSION     KCHQ01000470.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 208)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 208)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52411cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>208
                     /note="ultra-conserved element locus uce-1162"
BASE COUNT           35 a           70 c           60 g           43 t
ORIGIN      
        1 tgtgttgggc agcccggctc ctcggtagca gatgcgagcc ctcatgtcag aggcaggcag
       61 tggcccgacg gagtgccgct cgtgctcata cctcattgag ccatctcccc tagcagatgg
      121 cgcgctgctg cgggcgctcc tctccccgat aattaccagg cctcgccaca gatggaaatg
      181 tcagtcagcc tcacaggtcc tggttcct
//
LOCUS       KCHQ01000471             378 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 52660cha ultra-conserved
            element locus uce-181, sequence.
ACCESSION   KCHQ01000471
VERSION     KCHQ01000471.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 378)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52660cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>378
                     /note="ultra-conserved element locus uce-181"
BASE COUNT          105 a           99 c           87 g           87 t
ORIGIN      
        1 ctctctgccc ctcagcagtg gtggcagcta ccagattctg gtcaacaacg tcttttattt
       61 cacccagcgg gtggtggaca agctctggca gggcatgttc aacaaggact ccaagctggt
      121 ggtggacttc atcgtgcagc tcataggaca ggtacaaacc aaaacgcctt caaacgttcc
      181 tcaaggtcca gaatggacag attcacgatt gcctgattaa tcaggcaagc gtacagtttc
      241 ccctcctgca cctgcagagt cttactgaag gtgcaggaca agaagcctga ctgcatttac
      301 aatagagctg atgtttggct atgagtcaca ttatagcaga caaacttatc acacccagaa
      361 aaaagcgcca gcatttca
//
LOCUS       KCHQ01000472             311 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 52757cha ultra-conserved
            element locus uce-1311, sequence.
ACCESSION   KCHQ01000472
VERSION     KCHQ01000472.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 311)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 311)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52757cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>311
                     /note="ultra-conserved element locus uce-1311"
BASE COUNT           68 a           75 c           80 g           88 t
ORIGIN      
        1 ccagacccgt aaaagaggag atggtggaag aaggggccta aatttaaaca tttcctcttt
       61 gtcctgtttt gggcccattg tcatcgcatg gcgttctccc ttctgcacag gaaggagtgg
      121 atctgacatc aacgctctca ggctgacaat gccaggaagt ctgtctgact gtatgtaaat
      181 atctctatgt gtccacgctt cccttgccta cccgaggagc cgctcttctc tccatggcgt
      241 tctccctgga gcggctttaa gcacttgagt gtgtagcagt agtagtggta gtagtagcaa
      301 catggtgatt t
//
LOCUS       KCHQ01000473             205 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 52866cha ultra-conserved
            element locus uce-503, sequence.
ACCESSION   KCHQ01000473
VERSION     KCHQ01000473.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 205)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 205)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52866cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>205
                     /note="ultra-conserved element locus uce-503"
BASE COUNT           68 a           40 c           44 g           53 t
ORIGIN      
        1 aataaccaga taaaactgga ctaatggaat gtggtggagt ccagttggag tgagaaagat
       61 atactgcatt tccatacaaa ttgtttggag acacgaagtc aaggcttacc caagtctggc
      121 tttagctcag taggcaagct taatttccgt gacatctttg ctggaaaaaa gagaacatcc
      181 ctctttacaa acacacgtct aagct
//
LOCUS       KCHQ01000474             339 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 52968cha ultra-conserved
            element locus uce-133, sequence.
ACCESSION   KCHQ01000474
VERSION     KCHQ01000474.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 339)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 339)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="52968cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>339
                     /note="ultra-conserved element locus uce-133"
BASE COUNT           75 a          109 c           83 g           72 t
ORIGIN      
        1 ctccttggag agagacaatt tttcgctgcc gcgtccgagt ccaaaaataa caaagaacaa
       61 aggcggataa atgagtgagt ttttgagcac aggctagtgg gctttggcag caccggccag
      121 gcaggagggg agggagagac agggagagct agctagcggc ccgtccacac atctgtccac
      181 acagcacggg gtgggttcca gcgacaccca cagaaacagg cttaaccttc tcttcccccc
      241 accacctgtt cattactatg ggccccccca ccgagccacc accactctgc tcttctcctc
      301 tcacccgctc ccttgttctt gttctctctc tgtctgtcg
//
LOCUS       KCHQ01000475             480 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 53161cha ultra-conserved
            element locus uce-135, sequence.
ACCESSION   KCHQ01000475
VERSION     KCHQ01000475.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 480)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 480)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53161cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>480
                     /note="ultra-conserved element locus uce-135"
BASE COUNT          135 a           89 c           93 g          163 t
ORIGIN      
        1 tgtagatggc ttagcacata actgggggtg gtggattaaa taaaatgatc acagaagcaa
       61 agaaatgata caggaattac ttatcaaaat actagcccag gttttatctg cagcttaatt
      121 ttgttcagta cattctcagg gtgatgttca gattaattga actgacagct tcctttcaaa
      181 tttccggcaa ggtatttgca cggatttcag gtcttacaca aacttaatta tatggaaccc
      241 cattttatca ttctaattcc atgtagcggg ggttctattt acaaatgaca agtctgtgcc
      301 ttttattcac agctttcctt aatatattta tcaaagcggg ttcatttaca aagtgctcta
      361 tctgttgggt acaggcaggc cgacattaac gaagctttta ggtttatcag actcgcagcc
      421 tgacaagcca cccgagggtc aattgatttt ttggttctgt gatacatttt ttttctcatt
//
LOCUS       KCHQ01000476             237 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 53251cha ultra-conserved
            element locus uce-134, sequence.
ACCESSION   KCHQ01000476
VERSION     KCHQ01000476.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 237)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 237)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53251cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>237
                     /note="ultra-conserved element locus uce-134"
BASE COUNT           71 a           53 c           46 g           67 t
ORIGIN      
        1 gcctatatcc ctgcgtgtta atcactgctc ttcctggcgc acagagaaat atatgacggg
       61 tgcttacaga gaacagtgga ggacaaaaat gtgctcgctc ttggacacta cttgattaca
      121 gactaattgg tctagagtga ttaaatatct catgcttctc gctaattgca gctatttaaa
      181 gcagctatta gcttaaaatg cctgccacca acagccgttt actcataaac aaaatgt
//
LOCUS       KCHQ01000477             295 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 53350cha ultra-conserved
            element locus uce-136, sequence.
ACCESSION   KCHQ01000477
VERSION     KCHQ01000477.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 295)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 295)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53350cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>295
                     /note="ultra-conserved element locus uce-136"
BASE COUNT           69 a           84 c           67 g           75 t
ORIGIN      
        1 tcccccttca cccctggtct cctccacccc ccacctcacc ccggccctcc tctcccattg
       61 agggctgctc atgcagagga gagagaggca ccacgctgat tccctgcctt tcagctccgg
      121 agagggggat aatgctgttt ttgtaccacg catccagagg aattatgtgc gctaatttga
      181 ttaggggaag atttgattaa ctggaaaatg agggctttgc ttagactttc acacgcttaa
      241 tttatccctt gcaaagcaga cgcaacattg tgtcatgaaa ctcagaaggc atatg
//
LOCUS       KCHQ01000478             205 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 53445cha ultra-conserved
            element locus uce-139, sequence.
ACCESSION   KCHQ01000478
VERSION     KCHQ01000478.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 205)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 205)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53445cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>205
                     /note="ultra-conserved element locus uce-139"
BASE COUNT           41 a           56 c           64 g           44 t
ORIGIN      
        1 tcacccccac ttctctccag ccccctccga catcctcttt gggtcattaa gagctgagag
       61 gatggagaag ttcagacgaa taactggatc cgctcgcgga tggtctgccg gcagatcggg
      121 caggtcttga gcgcggcgct gcagtcgatg caggaggcgt gtccacactg gaagaccagc
      181 ttgatgtggt tgtcgatgca gatgg
//
LOCUS       KCHQ01000479             529 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 53495cha ultra-conserved
            element locus uce-138, sequence.
ACCESSION   KCHQ01000479
VERSION     KCHQ01000479.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53495cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-138"
BASE COUNT          171 a          108 c          107 g          143 t
ORIGIN      
        1 atgacttttc ttctgctttc aagaacatgg cgatgcggat gaattaaaca tgttaagcag
       61 gaacaggtct ttctctgaaa gccttaccct tttcatgata accccttttt agacattcag
      121 tggacttatc acagcgtata aataggacag aattcattat tcaggggagg tttcagtgaa
      181 aaattaatag ttgtccccgg aggagggtct gtggcgctcc ggaaaaggaa aacctttaaa
      241 gtgtacatgc acagggggat ctggagagcg tctgcccctc atactaaaac ctttaccatg
      301 ctacacttca cactgatatt gcaaatataa gttttctcag cactaatgac tgtgactaat
      361 accgtataca gtctgcattc atgcctaagc tctcctcaaa atatttttaa gatgaggaaa
      421 gaaaaggaaa cagaaaaggg aaaaagagtg tttgctcctg acactgacac ctcatataga
      481 ttacacattt tcagcattgc caagtaggac aaaacacaga gacttgagc
//
LOCUS       KCHQ01000480             268 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 53552cha ultra-conserved
            element locus uce-1326, sequence.
ACCESSION   KCHQ01000480
VERSION     KCHQ01000480.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 268)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 268)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53552cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>268
                     /note="ultra-conserved element locus uce-1326"
BASE COUNT           70 a           66 c           63 g           69 t
ORIGIN      
        1 tctctctttc tctctctctc tctgggacga ataattccac agttgctgag gcactgaaaa
       61 agcaatctgc ggaatacccc agggtcatgt ctgtggccgg atgatttgtg tgaaatgtca
      121 tacattaaat ataagtttaa cattcagccc ggtgcactgt aaaactgccc cgtcgttgcc
      181 acagtccgcc atttccctct gtgcagggag ggttcaggtt caggaaagcg gtcacaaagg
      241 agttggacac acaaatatgc acacagag
//
LOCUS       KCHQ01000481             359 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 53595cha ultra-conserved
            element locus uce-641, sequence.
ACCESSION   KCHQ01000481
VERSION     KCHQ01000481.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 359)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53595cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>359
                     /note="ultra-conserved element locus uce-641"
BASE COUNT          102 a          103 c           80 g           74 t
ORIGIN      
        1 tccctctctg tctgtctttg tgtctccaga cctgagatgg acgagcaacc ttaagactac
       61 cccacgctgg gctgcccttc acgataataa aaagccatta ccttgaccgc tgacacgagg
      121 ccaagtgtga gggtcagagt gatatttatt gatgaaactc tgagctccca atctgctgca
      181 ctcagtgcgc atcatacagc tgtcagcaca gacagggatc aggcagcatg atggccctcg
      241 acatggccca tctataattt atgaactaca cagaaaacaa ccaggagaca acagagaagc
      301 cccggctgcc cagggattac cctccagccc agctaaagag atctgaacga gaaccatct
//
LOCUS       KCHQ01000482             286 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 53681cha ultra-conserved
            element locus uce-1132, sequence.
ACCESSION   KCHQ01000482
VERSION     KCHQ01000482.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 286)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 286)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53681cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>286
                     /note="ultra-conserved element locus uce-1132"
BASE COUNT          103 a           58 c           72 g           53 t
ORIGIN      
        1 caaatcaaca ttcaaactac agcagcacag taaacatgca ggctagtcat gctcatcagt
       61 gactacagag aaatgaacaa gagcgacaag acttctgagg agaaacaaaa tgagtcgtta
      121 ccaccaaaca tttcatgacc agatgtccta gaggaaaagc taacaccgtc tgaagacacg
      181 acaggtaagt gagtggcatc gacaacgagt tttgagagga aagggttaag gtttggcatg
      241 gaatcatctc cagcttcagc agaggtgaaa ggatctgggc aggcag
//
LOCUS       KCHQ01000483             601 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 53767cha ultra-conserved
            element locus uce-1327, sequence.
ACCESSION   KCHQ01000483
VERSION     KCHQ01000483.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53767cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-1327"
BASE COUNT          175 a          113 c          164 g          149 t
ORIGIN      
        1 caaaagccca aacagaaaac ttggcttgag caagtcactt ttcccatggt gtgtcagtgt
       61 gtgtgtgtgc gtgtattgtg tgcatgtgtg taaattaact tcacaaaaaa actcccaaaa
      121 gatcacaatg tgtctcattt tccctcccgt attttaccct ttatgctata tctgtgtttt
      181 tctatattcc tttacaacgc aattcactgt gcttaaaaca cttacgattt atataggtag
      241 gtagcttcac gtctctctct tacacacaca cacatacaca cactgtaatg gataggagct
      301 ggctgagggc gtctgtcagg ggcgactgtt ctaatcagag cagtggggag agagataaag
      361 gagaaaataa tgagtgtggc atcaggcctt tcatagcgca acaaaaggcc acgggatcag
      421 atagacagac acaatgtgga gaggagagga agagagggag gagagaggga gagagaggga
      481 gggatgggag gaggcagggt ggggagagag ggagagagag agagagattt gtgcccacaa
      541 tggcgactgt aggtatgcta aatacctctg gttccttatc cgggaactac ctcttactct
      601 g
//
LOCUS       KCHQ01000484             234 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 53865cha ultra-conserved
            element locus uce-1096, sequence.
ACCESSION   KCHQ01000484
VERSION     KCHQ01000484.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 234)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 234)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53865cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>234
                     /note="ultra-conserved element locus uce-1096"
BASE COUNT           64 a           42 c           65 g           63 t
ORIGIN      
        1 gggctgagtg atcgattcag cagcctggag catcctagtg tgtttataca tggcttgtat
       61 ggcagctttc ataagacatt taccccatga tttgcgatga gcttatgtgt gaataattaa
      121 tggcaattaa tccttaatta cagtaattag gcaagtcaca ggaaattagg ctgcagctgg
      181 agaagcccgt gcctcggaaa gggaggactg gggctgagag aacgtgccat ttag
//
LOCUS       KCHQ01000485             458 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 53964cha ultra-conserved
            element locus uce-529, sequence.
ACCESSION   KCHQ01000485
VERSION     KCHQ01000485.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 458)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="53964cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>458
                     /note="ultra-conserved element locus uce-529"
BASE COUNT          135 a          115 c           82 g          126 t
ORIGIN      
        1 tgctgaaggt gtgacagatc cacgtatgtg cccccccccc acgcacacac acacacacac
       61 acgcacatac acacacacac acacacataa aagcatttcc ttccctctga atttctcctt
      121 gaattatatg ccatcactag tgtgtgtgat tgcggaatat taaattaaag tgggataagt
      181 ccgcaccgag gcgggctgcg tccaatccgc aactcatttc ccctgttgta gcaccgcatc
      241 actgcgctcc tctcttttca atgacaatgt gccaaatctg ggcattttga aaacactttc
      301 catatgctat tatcggatcg ctactgagca agagaaagac agaaaagaag aaaaacggaa
      361 tgttttatac caaaggtacc gagagtctac atttttattt atcttctctt tcaatggctt
      421 attatacttt atgccttttg gggatttaaa agaggtaa
//
LOCUS       KCHQ01000486             310 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 54066cha ultra-conserved
            element locus uce-417, sequence.
ACCESSION   KCHQ01000486
VERSION     KCHQ01000486.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 310)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 310)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54066cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>310
                     /note="ultra-conserved element locus uce-417"
BASE COUNT           99 a           39 c          116 g           56 t
ORIGIN      
        1 cacgtcagtc ccctttctct ccagagagta attatttctt tcagagtgaa aggttcaatt
       61 tgctataaaa gaacaagagc ctcaggtata gagggagtga ggttaggagc gtgaggaggg
      121 ggaggaagga gaatggaagt gatagggtgg cagagagaga gggagaaaag tgggggagaa
      181 aggggacgaa ggctgggagt ggaaaagaat gagagggtgg gacggggagg cggtgaggga
      241 gggaaggaaa aaagttgtaa gagaggacaa cccaaaatgt tccctctgtg tactggacac
      301 actgttctca
//
LOCUS       KCHQ01000487             466 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 54167cha ultra-conserved
            element locus uce-522, sequence.
ACCESSION   KCHQ01000487
VERSION     KCHQ01000487.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54167cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>466
                     /note="ultra-conserved element locus uce-522"
BASE COUNT          138 a          100 c           99 g          129 t
ORIGIN      
        1 ctttctccga tagtgaaaag cctaccagct ttctgccttt gggctgcttt tcctcctttg
       61 agagttggaa atgagaaatg gaaatggaaa taccaggagg tgctaaatta gctgcctgat
      121 ctgcacttat tgccgcatac aggcccctat tactttgcca atctgtgcct ctcttttagc
      181 attccgggca tggagaagct tcgagatagc agatttatca aatgggaaaa tgaatgcatg
      241 atgatcagtt aaattgaaaa tcagcgtctg catgacagcc cgacctgaca cctccgtaat
      301 tagaaagaaa aatgatggcg tccgatgcat aatagagcaa aaacaattta cactctccca
      361 taatgatccg gcgttcaaat tgaaaatttc tccgggtata aattgaattc ataaagtatg
      421 attcatggac gacacatctc ctggaggctg cctgggcata tcgatt
//
LOCUS       KCHQ01000488             451 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 54540cha ultra-conserved
            element locus uce-526, sequence.
ACCESSION   KCHQ01000488
VERSION     KCHQ01000488.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54540cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-526"
BASE COUNT          108 a          125 c          111 g          107 t
ORIGIN      
        1 cccaccctcc accacccttt acccaccttt tacttcctcc cattcagagg cacgcacgca
       61 ctcgctgtct gagttgcata gaacactgag acattccatt tgcatgcccg ccccatcaag
      121 ctggatgcac tcagactggt aataaaaggc attgaccccc ttaaccttta tgaattacaa
      181 tttgtgcctg cagcacgtcc tgtcagaggc ctcagaaaag caggcacctc agccagggtg
      241 tgtgcgtgtt gttttgcagt tgttaaggag aggggaaaag gtttttacag ctcctcgtcg
      301 gagctcctga caagcaggga ggaggcggtc tgacaggaga agcagggtag ggagggactg
      361 cagcgctgct gatggctcca tgctaatctc catttctgga tgctgcacga aaactactga
      421 cgctcctttc tttgtcaaga ccaaggatac a
//
LOCUS       KCHQ01000489             237 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 54589cha ultra-conserved
            element locus uce-1094, sequence.
ACCESSION   KCHQ01000489
VERSION     KCHQ01000489.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 237)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 237)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54589cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>237
                     /note="ultra-conserved element locus uce-1094"
BASE COUNT           67 a           51 c           54 g           65 t
ORIGIN      
        1 accacttcaa acaaatccat ctggaacagt gtgtgagaga gattcactga aagtatgggg
       61 aagttattta gctattaata acgttttttc ctcaggcatt gagagtgact ccatctgcac
      121 tttctcgcag ctatttggct gggtggaaat tgagggagac ccaaatgttg ggcagagata
      181 acatacccat catagcccag accctgcgct gtgcttcact gcattaaact cggatta
//
LOCUS       KCHQ01000490             206 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 54654cha ultra-conserved
            element locus uce-524, sequence.
ACCESSION   KCHQ01000490
VERSION     KCHQ01000490.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 206)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 206)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54654cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>206
                     /note="ultra-conserved element locus uce-524"
BASE COUNT           56 a           42 c           43 g           65 t
ORIGIN      
        1 ggctctttgt cagtaatttg caataagtgt ccgcgccaca tcttaaggga cctggaaatc
       61 attactggct gaggccctac tctgctacta attggatgcg ttgggcctta tcaactgagg
      121 attttccgag acctttgaca gataccaatt cgaaaatcat tgttcagttg tcaatttaag
      181 agaccgttaa aagagcttat tttaat
//
LOCUS       KCHQ01000491             318 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 54744cha ultra-conserved
            element locus uce-525, sequence.
ACCESSION   KCHQ01000491
VERSION     KCHQ01000491.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 318)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 318)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54744cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>318
                     /note="ultra-conserved element locus uce-525"
BASE COUNT          109 a           71 c           57 g           81 t
ORIGIN      
        1 aaatccctct gctacacaca cacacacagt cacacataca cacacttaag acattaagtc
       61 ctcaacctgg actgggcttg tgagggatat tggcatgtac acgagattga tgaaaattac
      121 ttccagagca tttatttctt ctaataccac tgaaagaaga gtgtgcactc aggagatatt
      181 tgatctgaat tagggaaact gatgaagcaa ttgattaatt ggaatttaag ccatcagtca
      241 ccagagccat cagctgcatc atttacattc caaacaatca cctgatggcc caataggaca
      301 ctgagtatta atacacag
//
LOCUS       KCHQ01000492             272 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 54947cha ultra-conserved
            element locus uce-415, sequence.
ACCESSION   KCHQ01000492
VERSION     KCHQ01000492.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 272)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 272)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="54947cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>272
                     /note="ultra-conserved element locus uce-415"
BASE COUNT           67 a           49 c           76 g           80 t
ORIGIN      
        1 cgcttggctc acgctttgct ttggagtttg gtggaataaa atggaagata ctggctccaa
       61 gctgcttggg ttactgtata gaagtagcag tcgtcagggt tgtattatag cctcttgtgt
      121 ctataatgaa gagcatctgc aacaggaaaa taatggctgt ttggattact gctactacga
      181 tgtctgcaca taattggtac aagaagtggg taggcgccag ctgagcggca attacgctga
      241 ttcttcccca gattgtaggc tgaagttgtg cg
//
LOCUS       KCHQ01000493             600 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 55137cha ultra-conserved
            element locus uce-358, sequence.
ACCESSION   KCHQ01000493
VERSION     KCHQ01000493.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 600)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55137cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>600
                     /note="ultra-conserved element locus uce-358"
BASE COUNT          172 a          137 c          114 g          177 t
ORIGIN      
        1 cacaattacc atgataaagg tgagcagggg gagaatgaat tgtgaaatta ggaacttctg
       61 tgtgcacggc aagaaaaaga aatctcccct atataaatac aatgcagacc agaaatcaca
      121 gaacaaatgc atcaaataaa tactttattc atgtggagct aatttcaccc cgccattttg
      181 atcacgtcat tccctctgga aaattgcaat taagtttgga gagataaaac atgccaacta
      241 ctctgcattt caaggcttga ttggcctatc agctagtcag tatgccgcca tggttttcat
      301 cactgttaat tgatcctttc tttaattaat ctggaaagga aagcccatat ctctatcctg
      361 tctgatcgtc ccctctgtct gtcataacac aataaaggcc ctatcctact gctggtaact
      421 ctgccttagc ctctccctct ggctctcggc caaatggact atttatggtg cacctatcta
      481 acgacaagcc tgctctatgg agttcaatgg ctgggttcat taacagtgct ttacccagcc
      541 acttctaatt tgcatgcagt gacaccttgc ttttaatatg gatgtgaagg ttagtggtag
//
LOCUS       KCHQ01000494             390 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 55230cha ultra-conserved
            element locus uce-426, sequence.
ACCESSION   KCHQ01000494
VERSION     KCHQ01000494.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55230cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-426"
BASE COUNT          103 a           89 c           73 g          125 t
ORIGIN      
        1 tctatcactt ctaattgaca ctaaatgatc tgtcagttta ttgatgaacc tttgaaacca
       61 ggttgtcaca atatatttta tccctaacaa ctttttccag acagttttac catgtctatc
      121 gctttgcctt acatgagtct taatcaagcg gcctgtaatg tgtcttaagt gtcgccaccc
      181 ccgccccccc agacaggaca cagtccaagg gcaggcaggt aggctctcag ctcctctctg
      241 ccctgcctgg ttggactcta gtactgtcaa ggctgttggt ctatgctcag acagcatgga
      301 taagacaaaa caggagtaaa caattagtta gctaattgtg ttttatgtca tcatttcctt
      361 ttatttttga aaaaatgatt gattgataag
//
LOCUS       KCHQ01000495             348 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 55415cha ultra-conserved
            element locus uce-354, sequence.
ACCESSION   KCHQ01000495
VERSION     KCHQ01000495.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 348)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55415cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>348
                     /note="ultra-conserved element locus uce-354"
BASE COUNT          109 a          109 c           47 g           83 t
ORIGIN      
        1 tgtgtgtgtg tgtgcgcgcg cgcactttcg gcggatattg ctctgtgaag caaaatggct
       61 cagagccagg gttcagtaat cacatcatct ccttttatta aatctccctg cactgcttct
      121 gtgttattaa aatctcccag cattccccac gatactcact acccctgcca ccactcactc
      181 actcactcac actcacacaa atacacacat gtatataaat atatatatac agtacagtca
      241 cacacacaga cacacacaca gacacacaca cacccgactc ggaacaaaca agaaattaga
      301 aaaaacaaca acaacatccc gtcgccttct cctcttcctc attagcat
//
LOCUS       KCHQ01000496             462 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 55493cha ultra-conserved
            element locus uce-357, sequence.
ACCESSION   KCHQ01000496
VERSION     KCHQ01000496.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 462)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 462)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55493cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>462
                     /note="ultra-conserved element locus uce-357"
BASE COUNT          133 a           94 c          123 g          112 t
ORIGIN      
        1 ctttagaatg tatttagcta gtatccagct aatgtgaaca gccacactta ctgtgctctg
       61 cttttgggat gtttggatct cagatgaagg gccatcaaag tttggtgcgt cctctgccaa
      121 gcgcagacat agctgagcat agagcgagct atacttcggc tcttctaggg ctttgtctac
      181 aatctaaacc gcagcgaggg acggggagag gaggaaaaag tcagagaggg aacactccgg
      241 tcattaaaac atgcagtgta tgagtcactc agagcagcct gccaagaaga gatgaatacg
      301 tttccattaa gcacgagtgt gcacttacca gcaagatgat tcctttaagg acgagttttg
      361 aatctacgcc cacgttcagg agctcaaggc atagcttgtc aaacttctca ggcgtgagtt
      421 tgttgagtat gctagaaaat gaaaaacaag aggggaaggg cg
//
LOCUS       KCHQ01000497             390 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 55661cha ultra-conserved
            element locus uce-351, sequence.
ACCESSION   KCHQ01000497
VERSION     KCHQ01000497.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55661cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-351"
BASE COUNT          121 a           87 c           70 g          112 t
ORIGIN      
        1 ttctagttcc accttaaatg cgttttggcc ccgcttgctc cctgtagttt aggttttttg
       61 tcctcccgca gcagctgtca ccctgcatta ctcgcagtca gctaaatgaa acattattct
      121 aaacatatgc atcgtaatca gtccggtcac acttacaaga acacgcgtta ataaggcaat
      181 caatcactct ggaacaagca agttgttctg taacagctca taaacagtgt gtaatgaaga
      241 attggaggtt agcatgacac ggcgctgatc agataatcaa tgtcaaagat gcgatgaatg
      301 tcagtaaatg cagttttcat gtcgtttcta taaaatcccc aatttacaac aagcagttca
      361 attaccctga aaatacagtc aattaaatag
//
LOCUS       KCHQ01000498             414 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 55929cha ultra-conserved
            element locus uce-413, sequence.
ACCESSION   KCHQ01000498
VERSION     KCHQ01000498.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 414)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="55929cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>414
                     /note="ultra-conserved element locus uce-413"
BASE COUNT          147 a           92 c           74 g          101 t
ORIGIN      
        1 agggaacatt tcaacaaata gagaatagca tggcactgtc acatggggag cacaaaacag
       61 caaataacag agacaaggtc tgatggtagc ccttggagca gctgtcatat taaataataa
      121 tgaaggatct attaatatgc aaaggaagca gcagccgact ggcttaacgc tgtcatgcct
      181 ctgcatattg tcaggatctt catcattaat taacatgcta gctgccccat acctgcgcca
      241 atgtcagaac attcttacaa caaacacccc aatgcctgtg ccctccgcaa ctaactcgta
      301 taattaaatt aaaatcagat taacttcaca tcagtacaca aaagactgac ttttatgact
      361 ttctctagca gcgattacaa aaaaaaggaa aataaccaga gcttatctgt tgtg
//
LOCUS       KCHQ01000499             282 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 56020cha ultra-conserved
            element locus uce-1280, sequence.
ACCESSION   KCHQ01000499
VERSION     KCHQ01000499.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 282)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56020cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>282
                     /note="ultra-conserved element locus uce-1280"
BASE COUNT           64 a           73 c           66 g           79 t
ORIGIN      
        1 cacacacaca cacacataca cacatacaca catacacata cacagctgtg gaggtggggg
       61 aagaggtgga gggggttgtc agtagttggg gcccattgtg cgagccgcca gcatggagct
      121 gtatgagctg tgatggaggg ctctggaccc ttgctgttgt cttgcctttc tctgctgatt
      181 tcatgcctct ttcatcattc actttcacac aaaacaaaca acaccgagga tgtctgctat
      241 ggaaacttgt gtctctctct ctctttctga atctttctct tc
//
LOCUS       KCHQ01000500             300 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 56109cha ultra-conserved
            element locus uce-1090, sequence.
ACCESSION   KCHQ01000500
VERSION     KCHQ01000500.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 300)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56109cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>300
                     /note="ultra-conserved element locus uce-1090"
BASE COUNT           73 a           71 c           66 g           90 t
ORIGIN      
        1 cagattgcag aagcaaaata agcccaagta aattctcttg ttgcctcagt tgtcatatgt
       61 tgtgttaaag gagtcaccat tcctcccacc ccttggggaa attaataaat ttggacgtgg
      121 gatttcacaa attctgctca ctgaactgaa gttggcagtt tgtttcgctt cggtgcataa
      181 acgccaactc ttcacattct agatctgctt gtgcacctga ggacgatctg tgcccatttt
      241 atgtgtgagt atgactaact tccacgccgc tggtgtttcg gcaagaagcc gccatctcgg
//
LOCUS       KCHQ01000501             455 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 56197cha ultra-conserved
            element locus uce-1088, sequence.
ACCESSION   KCHQ01000501
VERSION     KCHQ01000501.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 455)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 455)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56197cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>455
                     /note="ultra-conserved element locus uce-1088"
BASE COUNT          186 a           92 c           61 g          116 t
ORIGIN      
        1 atttgttttt aatatgtatc tacaacaagg gggacacagg caaaaacgac tgacaacttg
       61 atgaaaatta aaacaaaacc caaaaaaaag gggaaaaaaa gaattacatt tattatcaat
      121 gcagttttcc cacctttttt tccaataagc aacatttttt tcgtctaaag aaactttaca
      181 atataaagaa acatacgaag aaggaacctc ttattttact acacgagaca tttaggatct
      241 gaaactaccc taagatgaga tacaaagcaa ctccccaagg acagactgcc tcatattcaa
      301 tactgctttg tcatcaagag gaaaaatgag gaactgaaca gaaaaatctt tactcccctc
      361 aacaaaaaaa aaattcctct taaccctccc taacccctga atgttacagt attatacatc
      421 agcacaatag aaatacagaa atgatcaacg ttgtg
//
LOCUS       KCHQ01000502             299 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 56288cha ultra-conserved
            element locus uce-1328, sequence.
ACCESSION   KCHQ01000502
VERSION     KCHQ01000502.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 299)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 299)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56288cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>299
                     /note="ultra-conserved element locus uce-1328"
BASE COUNT           73 a           79 c           71 g           76 t
ORIGIN      
        1 acttcctgtc tgtcccaccc cctccgcccc ctccgccctc agattggacc agtcacataa
       61 ctgggtaatg tgggtattgt tctgggctgg gccggcctct tcacaggaac attggattct
      121 gtttgaagtc gtgatccggc acggccgact cacctgcaag atcaatacgc cgggttcaaa
      181 gctgccggct tcacagagaa cacactctta ttaatttata gaaacttcta gaaactttgt
      241 ctgaagggaa aaaccaactc tgtgtggtgg agagacaggg ggaattatta atatacctg
//
LOCUS       KCHQ01000503             324 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 56385cha ultra-conserved
            element locus uce-1091, sequence.
ACCESSION   KCHQ01000503
VERSION     KCHQ01000503.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 324)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 324)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56385cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>324
                     /note="ultra-conserved element locus uce-1091"
BASE COUNT           83 a           84 c           56 g          101 t
ORIGIN      
        1 accctcaaca tagctcacat tcatggtcca ccataaacca gcacacctaa gagggtccct
       61 tagaaaacac acagcaataa actgaaaagt gctaacttta caggcatttc tcaatcttaa
      121 catgagagtt gtgcagtggg caactatttt atttctcctt tcctcctatt tttgaatatt
      181 attcttttta ctgctgtagc agcacttgtg ctgaaatcca ttcccagttt tgtgacaaag
      241 cgtggccttc ttgacaaact ggagtggttt acttgcattg tcatcctggc caatttcttt
      301 tccctgctgc cgcggcccca gcag
//
LOCUS       KCHQ01000504             550 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 56481cha ultra-conserved
            element locus uce-1312, sequence.
ACCESSION   KCHQ01000504
VERSION     KCHQ01000504.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 550)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56481cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>550
                     /note="ultra-conserved element locus uce-1312"
BASE COUNT          138 a          114 c          123 g          175 t
ORIGIN      
        1 ttctaattgc cttggttgct gttaatggct ttgactgttg aatattaccc agactgagtg
       61 tgtggcgtgc gtaagtacct ttaagctgag cgctgataaa atagccacag tctgaagcca
      121 gatccttcgc cctttgattg tcttgtatgt atctttgggc cagatacata ttgtgactga
      181 aggcatgtct gtgactgtga atacattcga accactcttt gactccctta ccaagatgaa
      241 tgtatatata attacaaagt atatcacaca cactaccttg atatagagtt taatggccgt
      301 atcgtttctt tgtggagcat gtctgctggc cttaatcttc cccacagctg acatcttaat
      361 aactcagcct tcgccatcta tttccacggg agacatccgg atgttgggga aggattagtt
      421 taatgaattt gacaattagt aacagaagtt aatgactgca tggggctaag taccctgatg
      481 gacatggctg gggggactga gggcttccat tgctctgggc aatagatcct cattaatagc
      541 ttttctgcct
//
LOCUS       KCHQ01000505             333 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 56578cha ultra-conserved
            element locus uce-1286, sequence.
ACCESSION   KCHQ01000505
VERSION     KCHQ01000505.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 333)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 333)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56578cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>333
                     /note="ultra-conserved element locus uce-1286"
BASE COUNT           89 a           74 c           72 g           98 t
ORIGIN      
        1 atgtttttaa ttgcagaaat acatccttcc cctcattatg ggcagccgag aggacaagaa
       61 gcatctgcag aggatggaga gcaacattgc ggcaatgagt ggcacgctga cacagacagg
      121 tgaagattaa tatcttcatc actttctccc tccttaacat tttccctcat ttatctgtcg
      181 ccaaaatcgg ggggccccgc acgtttttaa caaatgacgc tgctgtcatt tcgctttaat
      241 ttgaaattgc ttgtttactg tcaggctcgg gctcaattaa ttacgtttcg ctgaaaagct
      301 cttaacctcg gaatattaat gaggagttgg gaa
//
LOCUS       KCHQ01000506             588 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 56674cha ultra-conserved
            element locus uce-795, sequence.
ACCESSION   KCHQ01000506
VERSION     KCHQ01000506.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 588)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56674cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>588
                     /note="ultra-conserved element locus uce-795"
BASE COUNT          190 a          112 c          104 g          182 t
ORIGIN      
        1 cctgcaacaa gaaaagccgt ttacggcgac acacaatgtg aaaagggggc cgatttaaaa
       61 aggagaagaa tgcaagcaag aacaacaaaa gtcagttata gcaaagtcta tgcctctcct
      121 ctcctatctt ccacccccta gcttagccca cataatgagc aggaaaaagc tttatatttt
      181 gttcactggg tattcacaga taatttgaag ccattgtttc tgccacagat ggttcttttt
      241 aatacaataa cggtgctctt tgtgaatagc gagcccacaa taaaaatcta aagcgtcctc
      301 ctgaataacc attttgttct ctcttgtata ggccgaacaa aagcgccagt gaggtaatgg
      361 cctgccttat tgaaagcctc agaatgggga tttgataaag atttttttcg ctcctttttc
      421 ctttttgcac aaagtacacg gcaatgtcaa aaagaaactg acacggcatg aaaaggaaaa
      481 aggctctaaa aagtgcttgc tgctgcaggt tgcgacaatt attactatta ttattattat
      541 tattattatt attattatta ttattattat tattattatt attattat
//
LOCUS       KCHQ01000507             572 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 56768cha ultra-conserved
            element locus uce-794, sequence.
ACCESSION   KCHQ01000507
VERSION     KCHQ01000507.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56768cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-794"
BASE COUNT          165 a          137 c           92 g          178 t
ORIGIN      
        1 cgttccaacg ctaacttgtc ttttagtttt tattgcatct caacataaat caatcaaagt
       61 aatgagagaa ctgtttgagc tgaagttcac ttttcacaca aagtttttga ctatctgtca
      121 ggtcacatta ttctgagtgc tgtgtgctgc gttcccggca ggctctttgt gtccagcccc
      181 ctgtgcacat cacacccatc cccagatccc tgccactctc agtaaaatca ttatttagtc
      241 cttttgtaag caagcagtgt cccagatcac aaattaatct ttcatatgtt tccaagatct
      301 agccttctgt aatcccatct gtatgagaca caacaaagca cagccagaga gagcccatga
      361 attattcatt catttctcat gaaaggcttt cgttatgtct gtcatgtttc actcttgcaa
      421 ggaaaatcca ttgatccttg ccttttctct gacaacaaga acaaacaagc gacatcacaa
      481 ggctgtacat tttctcacac tctgacaaat agatctgaca aaaatgcact ggcaataaag
      541 cattgtataa tatgcatatg tgcataatgt gt
//
LOCUS       KCHQ01000508             302 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 56861cha ultra-conserved
            element locus uce-797, sequence.
ACCESSION   KCHQ01000508
VERSION     KCHQ01000508.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 302)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 302)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56861cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>302
                     /note="ultra-conserved element locus uce-797"
BASE COUNT           70 a           85 c           57 g           90 t
ORIGIN      
        1 taattccata aaatctcata atgacctcaa acatttccaa ggtattaacc agcttaggcc
       61 agaatgtttt ttttcatata aaaggagatg ctttaggaga gctcagggat gaatgtgtaa
      121 tgagctcgaa ataacctaaa gccctttttt ctctcttttt ctcctctctg tgtcctccct
      181 ccctcctccc ctctctggct ttttttctcc tcttttggga aacatgcctt tcccagctgc
      241 acagccccca cagcgcgagg ccaggccagg agcacagctg gccagacttg gtggagccag
      301 tc
//
LOCUS       KCHQ01000509             651 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 56951cha ultra-conserved
            element locus uce-767, sequence.
ACCESSION   KCHQ01000509
VERSION     KCHQ01000509.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 651)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="56951cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>651
                     /note="ultra-conserved element locus uce-767"
BASE COUNT          202 a          124 c          135 g          190 t
ORIGIN      
        1 cagagcattt caggtctttg tgcgtttggc attgagtgga actgcatttg tcttaatgat
       61 cgtgctcctt gagctgattt ttgtttcaca ataatcaata tcaaagtcgc cactagctgc
      121 aatgcccaag aaagggggag taaacgtaga gaggcattct ttctctgcct cggccttgtc
      181 aatgtaacaa tgcttttaga gtttggccct gagcatctaa acacactctc aatcactcct
      241 gaaatcctag taggccacac ttggctgcta ttgtaactta gatacagtct caatttgtat
      301 gttgtctctc agcagacgtg gaaaaaatga atggattgat cttccgtccc agtccaacag
      361 ttacagcaca tctgttttca gacaggattt ataaaaagtg tcactgctga caaataaaca
      421 ggtacgttca caacttctgc attatattgt tatcatgcct gtatgatgtt ttcacacttc
      481 attcattgaa cacaccactg aattgtcttt gcaggccttt gacaaatgtg agagaataat
      541 tgtgctcatc agaaaaaagc aggaagtagt tattgggaac agttgatgtg aaagataagt
      601 taaaaagagt aaaaagagga acacaggatc aggaataaga aagacagtaa g
//
LOCUS       KCHQ01000510             670 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 57030cha ultra-conserved
            element locus uce-416, sequence.
ACCESSION   KCHQ01000510
VERSION     KCHQ01000510.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 670)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57030cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>670
                     /note="ultra-conserved element locus uce-416"
BASE COUNT          235 a          125 c          124 g          186 t
ORIGIN      
        1 gtactacctg tcctggcttc acagctgcat gaaccaaaag ctgttaagat cacttttgcc
       61 tgagctttga catatacaca gtctgtatat cctgtatatg ttaagtacta aatgtaaaca
      121 aaatgtgcag accacaagca accatttagc tggtgtgtgg atgtatgggg taggaaaggt
      181 ggtgggggga aaggaaaaca aaaaatacaa tacagacaat atacaaattc ccaactaagg
      241 catcgaggca taataggcat aataatcatt gaaattcatc agtcaatagc agagtgtagc
      301 taagagacta aactgacctc tgtcagcggt cacaatcctt tggtaaggat ggacccgcgt
      361 gtcatgccgt ctcactttag tagccattgc acctagattg taacaggtcc acaaggttag
      421 aaaccattca ctttgagcag gggaaaaaca gtcatctttt acagtaataa cattcacatt
      481 tttaaccatt atcattgtaa tgcttggcta atacaacaat acacagaata gcaacataat
      541 acaggttata gtacatatac acacaccaag cgtaactttt cttttttctt atttacgtgt
      601 agaaaaatgc agtagaaaaa aaataataca ccttttttgg agtttaactt ggtatttaaa
      661 aatgcataac
//
LOCUS       KCHQ01000511             464 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 57119cha ultra-conserved
            element locus uce-1097, sequence.
ACCESSION   KCHQ01000511
VERSION     KCHQ01000511.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 464)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57119cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>464
                     /note="ultra-conserved element locus uce-1097"
BASE COUNT          160 a          105 c           73 g          126 t
ORIGIN      
        1 tttataaaaa aatagcaagc gggctgattt ctgatattaa taatacaagt ggatccactt
       61 tgattaggct tctgtggaga gctgtgcata ttcagcatta caattaaagc ctctgatgtg
      121 aaataggaat gacacgctaa tgaagcgagc tagcgagcct gaaccgcgac tgtccaacag
      181 cattacggcc catctcggat gaagagtaat tatacgagga acactgaaat gtcattaaaa
      241 atcttcagta agtgatttaa cccaccattc ctcactaatg ctagatattt ctttttttct
      301 ttaccacctc ccacaacccc cacatgatca actcccaagg tttttccttt tttgaaaaaa
      361 aaaaaaaaaa aagtctttct tttccatgag gccaagtcca aacttctcct tcagaagttc
      421 cacaaacaaa aaaagggcac cagactcctt aaacacaaac atat
//
LOCUS       KCHQ01000512             539 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 57404cha ultra-conserved
            element locus uce-1092, sequence.
ACCESSION   KCHQ01000512
VERSION     KCHQ01000512.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 539)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57404cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>539
                     /note="ultra-conserved element locus uce-1092"
BASE COUNT          147 a          113 c          126 g          153 t
ORIGIN      
        1 gccgcgggtt tcgattattt ccaacttggt gcagtccctg gggggaagtt ctcggcgctt
       61 tctgaatttt attaaagcct ctacagctga ttacttggag tgaggtgcac aggttggtgc
      121 attttaggag tggagtggag gcctgacagg gtcatgttta acatgtccac aggcaatcaa
      181 ttcaccttaa cccctcctgg tactccagcc ctctccacct aagctgtcct taataaccag
      241 gcaatggcga attactgata aggcactggg gtctctgacc tatatatccc tccctgtatg
      301 tattggaaaa atccgccctg aaagaaatgt acatttataa tgcatagaaa tggtgaaatt
      361 aaacaatcac acattgcacg gctgtgaaat tcactttatt cttcagcttg ctgtacatgg
      421 aggatttgtt tggtgtttgc tgggtgaagc attgggccaa attgtctaga tggaaataaa
      481 tcaggcgcat gcaatacatg aagggttgag tgaaaatcaa caaatcctac acaaacatg
//
LOCUS       KCHQ01000513             266 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 57499cha ultra-conserved
            element locus uce-798, sequence.
ACCESSION   KCHQ01000513
VERSION     KCHQ01000513.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 266)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 266)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57499cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>266
                     /note="ultra-conserved element locus uce-798"
BASE COUNT           70 a           51 c           85 g           60 t
ORIGIN      
        1 tacctgtcta atttattagc ctcctgcccc agccctgaag ggccattagc aacacacact
       61 gacacagcac accggcctgt gtcgtaattt attgtcttat tacagggctg cagcggcatc
      121 aattaattat ccattaaagc gctgccgtcc caggatttat ggagggaact gtgggggctg
      181 tgggagatac agtaggagag gaatgaggga gagagtggga agatgtgagg atgaggagga
      241 gggtgagcag atatctgggg gaggat
//
LOCUS       KCHQ01000514             618 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 57577cha ultra-conserved
            element locus uce-28, sequence.
ACCESSION   KCHQ01000514
VERSION     KCHQ01000514.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57577cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-28"
BASE COUNT          208 a          126 c          116 g          168 t
ORIGIN      
        1 tgatgagtaa agagatggaa ttgaaaactg aatgcgaaac taagccaaga tatattcaca
       61 agatcctcta agctgcactg gtttacaggt caacagatga gagctctagc cctagactta
      121 ccaatttcac cctcatgcat actgtacggt taaagtgacg caacaagctt gcttaaatag
      181 tctacatcac aaaagcaatt tggttttagt gcaaacacaa ttggctggct tcagcttctc
      241 aataataaca agctcaccaa ggagattaca agaaggcaca tacttatgct tcctctaaca
      301 cgcaacatat ttagacaaac cgcaacatct ttcaacaaca ccacgaagcg gtgaaaacag
      361 gaaagctact acatccagat aaaatggtga agttttgccg tttgtgaatt attgaaaaat
      421 ttacacttat ccatcaacaa aataacaacg ttaaggtcaa gagttactgc tgctgagtga
      481 cctcattgaa aaaggatgaa gtatgataca ttttggtgga cacagattct ctacatacgt
      541 ggccaatgat gctgtgtttg tacgacaaaa ggtgcatttg ggcttttttt tttccctccc
      601 tctaaggagc gtttagtt
//
LOCUS       KCHQ01000515             438 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 57661cha ultra-conserved
            element locus uce-411, sequence.
ACCESSION   KCHQ01000515
VERSION     KCHQ01000515.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 438)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57661cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>438
                     /note="ultra-conserved element locus uce-411"
BASE COUNT          121 a          101 c           72 g          144 t
ORIGIN      
        1 tgatcgtatt acttccacag tcctggtttc caatgcgtct gaactttttc cctttctctt
       61 ttattttgtt tgtggtacct agcctttttt tcccctgctt aagactttaa aagccttcag
      121 ctcagtaaag cagcacaaat tatcttgcca ccttgctcag ctctgatgct ttggccgcta
      181 actttggaag gccctttact actgcatcaa aattagcatt gtcaaagcag ttaatgaata
      241 ttaatattgt atttgtcatt ggagctggcc cattgctgaa ctccaagtca tccatcaggg
      301 acaagattaa gcacacaatt atttctgact gacagggacc aaatctggaa gatttttttt
      361 ttcctccaac aatttaaaga aaaagacaca gcatcatctt aaggtacctc ccatgagacg
      421 aggcaagatt aatacact
//
LOCUS       KCHQ01000516             606 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 57756cha ultra-conserved
            element locus uce-26, sequence.
ACCESSION   KCHQ01000516
VERSION     KCHQ01000516.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57756cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>606
                     /note="ultra-conserved element locus uce-26"
BASE COUNT          176 a          107 c          164 g          159 t
ORIGIN      
        1 aactttgaca ttgctgcttg aaaaatgcct gccctttttc attgtcaagt gttacaaatt
       61 gatgaaatga gttcatcgat gttccctggt cattatctct ccagtggcac tttgttttac
      121 agacagtggg aaaagggaca gtgcagatta gaggcccagg cacagtttat caaacaaaat
      181 ctaatatcat ccataagaga ggaatctgga aatcaatact tcattactaa attgttagtg
      241 gggatgaaga gtaattgtgt gagttcagag atgtgtctcg gcggccgggg cataggaagt
      301 tcaatgtcac ccgggaagtg ataagtaaag gcactgatgg gaagaaacat ttctgtaatg
      361 gggggtgctg gaggagggca gtggcctgag cacagaacag acaatagaca ctggtttgcc
      421 attgattggc tcagctataa agatggaatg gtttaaagag ccagagagag aaagcggggg
      481 agacagaatg agaggaggga agaaaagagc accaccttct gaatttaccc ttgtcttgtc
      541 accggtttct gtgcaatgcg tgaagtcttc ttctgtggtc accgcgatca atcgtcctgt
      601 gcattt
//
LOCUS       KCHQ01000517             316 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 57851cha ultra-conserved
            element locus uce-27, sequence.
ACCESSION   KCHQ01000517
VERSION     KCHQ01000517.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 316)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 316)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="57851cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>316
                     /note="ultra-conserved element locus uce-27"
BASE COUNT           90 a           67 c           67 g           92 t
ORIGIN      
        1 ataataacat ccctgacaaa atattcataa aggtaatgat gaatgccata tttctagaga
       61 tacatcagag gcgtcttggt taaaagaaaa cagtggccgg cgtctcccac accctcaaat
      121 tatctgccgc tttcacattt cactgatagc attgatgaga gctgaggaaa atggacacac
      181 aattatgctc acttgtcgta tattaatact gcttcttgac atcttccatg gaccctgagc
      241 tgtcatctct ttgtctgctt taattgaaaa ttaatggtta gtgcgttgcc aaggcgaccg
      301 cggcagtggt ggtggg
//
LOCUS       KCHQ01000518             376 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 58212cha ultra-conserved
            element locus uce-1310, sequence.
ACCESSION   KCHQ01000518
VERSION     KCHQ01000518.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58212cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>376
                     /note="ultra-conserved element locus uce-1310"
BASE COUNT           92 a          101 c           80 g          103 t
ORIGIN      
        1 cttcttgcca actgtgtcca gtgcacgcag accccgggac acacaaaggc agtacaagca
       61 atcacacatc atggactctc ataataagct gacgctggga agtgggtgat gcagcactca
      121 gcttatgcca gtgctgataa gagcctgaaa gtattacctc ggtctggcag tccgctccaa
      181 gaaatccatc ctgagccagg tcatcaattc tgccctatct gattgctcac caatccctgg
      241 cagctccatg tcgctgtcct ggcttctgcc tttgaaattc tctctatgac ttgcactttc
      301 atgctagttc ttccacagaa aataagtgca tactgtatgt acatgtgggg tttttatgta
      361 atcttacagc tgcatg
//
LOCUS       KCHQ01000519             415 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 58303cha ultra-conserved
            element locus uce-793, sequence.
ACCESSION   KCHQ01000519
VERSION     KCHQ01000519.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58303cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-793"
BASE COUNT          123 a           68 c          110 g          114 t
ORIGIN      
        1 gactttgaag aacacatata ccttattctc tttgggcgtt tcgtaaataa tcgaagtggt
       61 ttgtggagta cgtaaacaac gttgtggttt ctgcagacac gctgtgttgc gtaagatgta
      121 atgtatattt tactctggct gggaaaggaa acataatgcg tttagtgaga tggtgaagtc
      181 agtaagcaga aaaacacatg ctgcagcaga agtaaacaat gcataatgct atattgagat
      241 gagcaaacaa tgggcacgtg ctgatttgca gtcaacaatg caatgccgca ccttaatgtg
      301 tctgggccaa acaatgcaaa agccgattat gcaaattggg gttatcgagg gcactgcaat
      361 gtaacaatgg caccaagttg attgagctgg gctgtgtgtg tgtgtgtgtg tgcac
//
LOCUS       KCHQ01000520             223 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 58400cha ultra-conserved
            element locus uce-21, sequence.
ACCESSION   KCHQ01000520
VERSION     KCHQ01000520.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 223)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 223)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58400cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>223
                     /note="ultra-conserved element locus uce-21"
BASE COUNT           67 a           33 c           41 g           82 t
ORIGIN      
        1 tatacactta ttttactaag ttgcaagtag agaatgctat aatttgcaac ccgtttttca
       61 aatccaatta aagtcaatgg taaggcgatg gcttttgtag gctttgcctt atgtacggta
      121 taaggcttat tatatccacc cctctttttt tgtgtgtgtg taagccgcga agaatgaact
      181 aaatcgggtt aacagttata ataagtttta ttatttaata aag
//
LOCUS       KCHQ01000521             339 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 58441cha ultra-conserved
            element locus uce-1081, sequence.
ACCESSION   KCHQ01000521
VERSION     KCHQ01000521.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 339)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 339)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58441cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>339
                     /note="ultra-conserved element locus uce-1081"
BASE COUNT          107 a           72 c           83 g           77 t
ORIGIN      
        1 tgaggtttgc cagctgaggc caccgataaa cattttactg taaggggaaa acacaacaga
       61 agtgagtcca gatgtcagtt cggccatttt gacgactaac tacttctaaa agcgacctta
      121 aaggataaag gaagactatg gaaacacatt cgcgctgggt aattatagtc tatctacatg
      181 aaagggggag gccactctcg ctacaaagct caggtcttta aaactgcatc tggaaacgga
      241 cccgtgcacg gtttaagtgc gtactgtggg gacgaatcca gcacggcagt cgaagtcctc
      301 tccaagatgt tgtaacatga aaaaaaatcg taccttagg
//
LOCUS       KCHQ01000522             717 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 58513cha ultra-conserved
            element locus uce-418, sequence.
ACCESSION   KCHQ01000522
VERSION     KCHQ01000522.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 717)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 717)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58513cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>717
                     /note="ultra-conserved element locus uce-418"
BASE COUNT          224 a          157 c          132 g          204 t
ORIGIN      
        1 gaaccctctc tcttaaactg tagcaggcat atattaccag gcttagagct tggcaagctc
       61 cgtatcccaa aatagatttc aacaatactc tatgaggatg cattaaataa atctctgctc
      121 agctaatccg tggaacagtt cacattttcg agagagacac tccggtagga caaaagcgcc
      181 gctctgctcg ccgcgccttc atctagggac agacatacat aaagagagat atttagagag
      241 aggggagggg attgggggga aagaaatcct ccactaatgt gacagagaat tcccccccac
      301 ccaaaaaaaa aaaaaaaatc attgtgtgct cttgcactgc aaagcagatt ctgtatcact
      361 ctatattttt tctcgagcaa gtgcaataac ttaatcttaa aggcaaaacg tggacatgag
      421 ggccatttcg aaacatgttg tagataaatg ttaatcacat tagcatttcc cagacttccg
      481 taaatctcca taaatagcat gctgaggttg atccctcttt tttgcccatt gaggcaaaat
      541 tacagttgat gaattgcttt tgccatgcat gtaggctaat gaaagctttg ctcctgggcc
      601 ttccttaaca aaggctcata atttttccac tttccactaa aataagaacc tgttccactt
      661 ttaattaata gttttaccct ctcctattca ggagtatatg catagtttca aattaat
//
LOCUS       KCHQ01000523             556 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 58611cha ultra-conserved
            element locus uce-559, sequence.
ACCESSION   KCHQ01000523
VERSION     KCHQ01000523.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 556)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 556)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58611cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>556
                     /note="ultra-conserved element locus uce-559"
BASE COUNT          159 a          135 c           91 g          171 t
ORIGIN      
        1 tgaacacagt gcatgaatgt aatggagatt caacatgcta aaaaagacac catattagta
       61 attcatacta gtaattcaca tttgatccac ttctaattca ttgatctgag gttgcaagtt
      121 cccatgagct aaaaactgag attatgtatt agaggggtat aaaaaaacag atctgcgcgc
      181 acattcccat ccaatcattc tgaaaccata accctttaaa accctgaaaa aatatggtct
      241 acatcaagct gtcgcaggaa gacagaacat ctctgcaaca attgcttcaa gagtttgctc
      301 tttcttccct acatttctcc tttttctccc tctctcgttc tttttttctg cctgactttt
      361 acaacttcct cctggttggg gctgcagctc taacccaaac aaaactccat tttttagtta
      421 ttggccctca tggcatgtaa tggagaatca agctaattat ccctacagct gttttcactt
      481 gctttttatg taagcaatac ctggctgatc cagagagcaa cagtgaggcc cttcttagcg
      541 ctccaggcct ccaggc
//
LOCUS       KCHQ01000524             628 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 58984cha ultra-conserved
            element locus uce-555, sequence.
ACCESSION   KCHQ01000524
VERSION     KCHQ01000524.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 628)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="58984cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>628
                     /note="ultra-conserved element locus uce-555"
BASE COUNT          191 a          123 c          123 g          191 t
ORIGIN      
        1 aaacaataca aagtattatt aatcattttg cttcctgcca acaaaagatt atctttttct
       61 gcatacacat gcaatctcac acagcctttc cacggtggct cattctgttt gggacaatgc
      121 tgatgatact gtcatataac aaagtcttac tttctgtctt aattttgctt gcaacttctc
      181 tctggtgagc acagatggag acgggcagtg agggcataac caggtgcgct tcctctgtag
      241 tatacagaca atagacatgc tgaagggacc agtagcacaa attgggtctt ggatagagac
      301 agacactgac tgtctctaac ctgaatcact tggtacatgg gtgggtggca gtgaacataa
      361 cgcaggatgt aaatagcctc aaaagcgaat gcagccagac tgagattgca tgaaatgagc
      421 tcttattatg atctggctat ctccgcacca taaaaagatg tccatctcaa taagtgattt
      481 catcttatat taaatgtgac actatgttca tcttgtgaag ctgctggcaa tgtcttaata
      541 tttttttcaa tgatactcat atttatactc catataagtc aagacttctg ttttaatgaa
      601 agcaatatga acatttgaag agatggac
//
LOCUS       KCHQ01000525             333 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 59079cha ultra-conserved
            element locus uce-792, sequence.
ACCESSION   KCHQ01000525
VERSION     KCHQ01000525.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 333)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 333)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59079cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>333
                     /note="ultra-conserved element locus uce-792"
BASE COUNT           86 a           68 c          120 g           59 t
ORIGIN      
        1 ctgctgtctt ctgctgcacc catctgttct gaaagtgcag gtggagccct attcactccg
       61 ctctgcatgt gtgtgtgtgt gaagaggggg gcaggaagaa aggaagggca gcgagaaaaa
      121 gggagtggag agtcgggagg gcagggatgg aagagggagg gtgggggact cttggtgatc
      181 tctcctgaag gggataatgg gagaggagcg cattgcaatg gctgccatgt agtaccctcc
      241 ctgcacaatt agccaatcag cagcgcgctc tgccagccag gaggacgcat aaaagaagaa
      301 cattgcagca gaggcacaga aggagactgc gag
//
LOCUS       KCHQ01000526             377 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 59173cha ultra-conserved
            element locus uce-553, sequence.
ACCESSION   KCHQ01000526
VERSION     KCHQ01000526.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 377)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59173cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>377
                     /note="ultra-conserved element locus uce-553"
BASE COUNT           87 a           86 c           86 g          118 t
ORIGIN      
        1 ttcctttata caattggcaa agttttgtca agaaaataaa ccggtttcca cgtgtttgtt
       61 tgtgacagcc tagatgtgag cggcggcgac ataaatcatg tcacatttat ttttcctctc
      121 aacttggaac atggtcgtct tccctgtaga attcagaact gatcattaac ctttcctgta
      181 gttccttccc ttgcctggtc acatttcctc tctatttggt tcctggcccc atatgccact
      241 ttcctatttc ctgcctgcag acagcaggga gtagctctat tatcaccttc ctagagctgt
      301 ctttgaatgt gagaggcaat tccatttcac tcagccatgg ggaggagtag gagtaggagg
      361 aggaggagga ggaggag
//
LOCUS       KCHQ01000527             236 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 59265cha ultra-conserved
            element locus uce-552, sequence.
ACCESSION   KCHQ01000527
VERSION     KCHQ01000527.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 236)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 236)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59265cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>236
                     /note="ultra-conserved element locus uce-552"
BASE COUNT           99 a           43 c           35 g           59 t
ORIGIN      
        1 tacagcaaag atcattttaa tggtcccaaa tattctgaac aactaagtgt acactcatgt
       61 aaaaggaaaa aaaaaaaaga gaagatatga caaaattcat cacatctaga attccactca
      121 atctttaatc aagacgggat tacaaattct ccaaaaaatc tgcagtttca aagggcaaaa
      181 agggtaaaac tatctcacct actgaggtct ttaaaaacct gttcaagtgt gactga
//
LOCUS       KCHQ01000528             205 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 59354cha ultra-conserved
            element locus uce-550, sequence.
ACCESSION   KCHQ01000528
VERSION     KCHQ01000528.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 205)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 205)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59354cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>205
                     /note="ultra-conserved element locus uce-550"
BASE COUNT           53 a           43 c           43 g           66 t
ORIGIN      
        1 acaatgagac agtaaaatgg gaatagaggc ctctgcatac tgctgctgtc tatatcagtc
       61 aacgatgaat attcatgaat cacagtgtca tgacatgctc tgtaattggc agcaacatta
      121 gtaatgacac tgctggtatc aagtccctgc atattcatgt ggtgggtcaa tatttcctcg
      181 tggtgctgtt tttttctctc ctcct
//
LOCUS       KCHQ01000529             421 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 59445cha ultra-conserved
            element locus uce-229, sequence.
ACCESSION   KCHQ01000529
VERSION     KCHQ01000529.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 421)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 421)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59445cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>421
                     /note="ultra-conserved element locus uce-229"
BASE COUNT          135 a           78 c           72 g          136 t
ORIGIN      
        1 accataatta atgataatct gtaacagagg aatctgagat tccagttcac agaactgttt
       61 aattaggccc agtaatgaaa gcacaggcac tacaagaata tggccggcct catgattaat
      121 gatttgtgct actgaacaca aaagtgctgc accgttaact ccaacggatg ctgctgtgtc
      181 tccctggcat ttacagaaca ccaaaataca tatggagctg tttgcatccc ctatataaaa
      241 caggataaat actatgtttt tattatatgt gcatgtactc ctgtttttta ttatttcatc
      301 ttctggatca gccaaaatat ctttcgcatc tagtggaatg actaaatttc aaaatgaact
      361 gagtataatt tttacatgaa ggcagttata attgtctgtc catgtatgtt aatatattgc
      421 a
//
LOCUS       KCHQ01000530             512 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 59536cha ultra-conserved
            element locus uce-932, sequence.
ACCESSION   KCHQ01000530
VERSION     KCHQ01000530.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 512)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59536cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>512
                     /note="ultra-conserved element locus uce-932"
BASE COUNT          156 a          102 c          110 g          144 t
ORIGIN      
        1 gcttccatct acctaattaa ctagtattcc tgcaacacac taaaataatc aataaaaaaa
       61 agatatttca tcattgctat ggtttgtatg ctcagatatc cagataatta aaacacatca
      121 catgctagct caccttagca atggcagaaa taggcttttt cagttttcaa acatgtttct
      181 tttttttctt ttttccagtg gaataattaa aaatgcctgt tttatctcag cttttagtca
      241 tagtgtggca gcactctctg ttgcatctgt gtgttgtgca gagatagagc gtctgtggag
      301 ggccaaggag cagactccag agatccatcc atctcaatct gaggctacag ctgacacctt
      361 acaaagaggt acaattaata agggcattat ccagcagtag gcaacaatag agtcctaacg
      421 cagagacacc aacctcggga ggcccagaga ggagagaaag ggagcgtgtg tgtttatggg
      481 tgggggatgg gctagccaaa gtgcttcaaa at
//
LOCUS       KCHQ01000531             615 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 59621cha ultra-conserved
            element locus uce-217, sequence.
ACCESSION   KCHQ01000531
VERSION     KCHQ01000531.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 615)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 615)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59621cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>615
                     /note="ultra-conserved element locus uce-217"
BASE COUNT          167 a          115 c          176 g          157 t
ORIGIN      
        1 aacgagacga cgctcgaatg gtccaactga gcccaaacgc gttccctgtc ccggcccggt
       61 cgatgctcta caacctggcg cagcctctcg ccgccatcaa caggtaaagg tggaggcaag
      121 aaaagaaaaa aaaaaaaatc gtatggtttc acgaatgcac gtttcatttg atcattgtga
      181 gtgttcacta tagaaagtta gaagtttgat ggcggttaga tgttgccctg ctggggccct
      241 gcagaaacag gctactgcag tgtgaagaga ggctcgaagt gtaattgagt ttacattatg
      301 tggacattgt ttaacatgta tgtacatgtg tgacagagag aatcagctta taaatggatg
      361 tgtgcgtttg tgtaattatg agtgtgtgtg cgtgtttcta gtgcaaggag tggaggatgt
      421 taagggttaa aagcaatgga ggaaatgatg tatgctgaaa ttcatgtttt ctgtgcacct
      481 tttgtctgct ttctgttgct gaagtctcgg aggggagtcg gagcagtaca gcatgtaccc
      541 cagcaacagg gtaaagcgcc gcccggcgcc ttatgaggtt gaactcgacg agggtaggcg
      601 cacagaaaac atgaa
//
LOCUS       KCHQ01000532             814 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 59708cha ultra-conserved
            element locus uce-221, sequence.
ACCESSION   KCHQ01000532
VERSION     KCHQ01000532.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 814)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 814)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59708cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>814
                     /note="ultra-conserved element locus uce-221"
BASE COUNT          214 a          194 c          162 g          244 t
ORIGIN      
        1 ttacagaacc agagagccac tcatagagca catcatggtc agagctgcag ctctgcacgt
       61 gggcctcatt tgctgctagc tgagacggcg ctgcagctca ctagccgcct gtgtacctga
      121 gccatttgtt gctcactcca tcttttaggt ctcccgagca cgcaagtgaa gccattttct
      181 ttctcattcc aaaatatttt tggtctgagc tttatgtatt cataatctat ttttcaccta
      241 ccaaccttcc ttccctccat ttggcttttt gtcatcccat gatgccttgc caatagtgct
      301 ttgctctctc cctctctctc tctccccacc ttcctctctt gctccaactc tctcccctgg
      361 agaggcagct cttctcccta cgcccagatg aaaggctatg gcggacaata aaaatgctat
      421 ttaaatgcaa gggtgtttgt gtgcgggtga gagatatttc ctgctgaaag tgagctgctg
      481 catcctgata aatagtaaat ataagggaat gtgatttaca tttatcttgc agaggcagcc
      541 aatatgaatt tcagtaaatc ctagaagatg gggatttaag gaggaaaatg actgagactg
      601 attcacatgc tgtgtgtcct acgcagttga aatgcctata aggtggagag tggtactgcc
      661 tttattaaag tataggcaca ggcatcgatc ctatctagaa tacctattac acacagacat
      721 tgtgtcacat gctcacctga gatttccagc ctcaatttga aggtgacttg cactgaagca
      781 acaataatat agtaataata ataataataa taat
//
LOCUS       KCHQ01000533             422 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 59796cha ultra-conserved
            element locus uce-1085, sequence.
ACCESSION   KCHQ01000533
VERSION     KCHQ01000533.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 422)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59796cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>422
                     /note="ultra-conserved element locus uce-1085"
BASE COUNT           94 a          105 c          136 g           87 t
ORIGIN      
        1 tggtgggttc gctgcacaga attacaagcg agggagcagg cctgctgagg caattacagc
       61 ttaatggggt catttggaag gcaattgcca ggggttaatg tagtatggag agatgaggtg
      121 agattgaagt gaaatttttg gctagaaaat gtgttcaaat gaaaagggag caggcagaca
      181 agttgtgcac tgatggggtg ggaggttgat tgggggaact ggaatgtagg ctttcgccgc
      241 cacacagata gacgcgaggc ccggccgctc gctcgctcgt acgcacgcca ccgcgggcga
      301 tcgcaggtga gcgtgtccac acaggtgctt tctcctctcc gctccttcgg ccgagcccgt
      361 gcacactcac ctggcctaac acgagcgccg ccgtcctcac gcacactccc aacgctggtt
      421 gg
//
LOCUS       KCHQ01000534             344 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 59894cha ultra-conserved
            element locus uce-222, sequence.
ACCESSION   KCHQ01000534
VERSION     KCHQ01000534.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 344)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59894cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>344
                     /note="ultra-conserved element locus uce-222"
BASE COUNT           79 a           83 c           77 g          105 t
ORIGIN      
        1 aaacgcttct taaaggtcat ccctgttctc ctctctctcc ctacagagtt ccactcactc
       61 gctgtcaggc cgtggctact cggtaagtgg cattttcatg cttcatagct ttacggcaga
      121 attacaatct ccaacgaccc gctttatggc cccggcgctc gacattttaa ttatgttaaa
      181 tagagtaatg gagaaatcat gatattagga acattaattc tggctgactg actgattaaa
      241 ttgtgggaag gtgtcctgcg ctaccttggc gaaaagagcc tcgttttatt ggcatcgatc
      301 agcgctgctc gccggtgctg caatttggct gtcagagttt tatg
//
LOCUS       KCHQ01000535             338 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 59991cha ultra-conserved
            element locus uce-225, sequence.
ACCESSION   KCHQ01000535
VERSION     KCHQ01000535.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="59991cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>338
                     /note="ultra-conserved element locus uce-225"
BASE COUNT          115 a           67 c           69 g           87 t
ORIGIN      
        1 tgttttgtat gataacaaag gacaagtgaa tgtaagtgca cagaggtcat ttttgaaggc
       61 aacagaaata aactgtgggg ttttttcttt ccgaaaattt ccttcaaagc aagcaacaac
      121 gaagggaaca ggggacaagg ggaaaaaaaa aatcttcatt gaatattcat taaccggtgc
      181 ctaggtgtat acatggctct taactactct tgtttatgac ttaaggactt gtagtactga
      241 ccttagttta acacagcagc agataccaaa ttaacctcta gcctccacag ggctagccat
      301 gccctgctaa caagcaacct gtctagacac acaagaag
//
LOCUS       KCHQ01000536             281 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 60078cha ultra-conserved
            element locus uce-224, sequence.
ACCESSION   KCHQ01000536
VERSION     KCHQ01000536.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 281)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 281)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60078cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>281
                     /note="ultra-conserved element locus uce-224"
BASE COUNT           71 a           66 c           52 g           92 t
ORIGIN      
        1 agcttataaa tcaaggggtt cagtttttcc tttttttcgt ggaaaattag gctctaacca
       61 gagggattgg caatgcatgc agaattcgat caaatttgct ttcaaacgga ctgaaaaata
      121 gagcacattt attctattcc gcctgtttag acataaacaa gaacagcgtt ttctacattt
      181 gctttcctgc ttgatttatt gccatcctcc tttccagcaa tcaatttctg tgtttcagtg
      241 gcatccccct ccgcccggcc tccacgcctg tttgggaaaa g
//
LOCUS       KCHQ01000537             493 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 60451cha ultra-conserved
            element locus uce-1228, sequence.
ACCESSION   KCHQ01000537
VERSION     KCHQ01000537.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 493)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60451cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>493
                     /note="ultra-conserved element locus uce-1228"
BASE COUNT          165 a          104 c           88 g          136 t
ORIGIN      
        1 ttcttttgct tcatcaagtt ccgctgcaca attacatgaa tttactttca ataaattacc
       61 atccttgcat acatcagtca aatcatccag ctgaggcatt cgcaaacaat atgcattatt
      121 aatttcattg tcagtgttta tttggttaac ttgtaaccga cttggacagc ccattgcctt
      181 gatgatgcat ttaaaagcat cagggtcggc tttttaaaag gaaatcaggg gatgacatgc
      241 ttccacacac cacttcgctc cctgctgagg ccacagaggg aaaaagactg aactccagtg
      301 aaagaccaat caaaaactca aaagatgcat caggagctgc caaagccaaa acaacagaat
      361 caggaagatc atccacatca cagcgattct cagtgagtgg ttgttagcac tgattgagta
      421 gatttcaatt taacaagttt ctcctgtcta caacagttaa ttgaatgaat atattgtata
      481 aaggagaaaa aca
//
LOCUS       KCHQ01000538             412 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 60540cha ultra-conserved
            element locus uce-59, sequence.
ACCESSION   KCHQ01000538
VERSION     KCHQ01000538.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60540cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-59"
BASE COUNT          107 a           96 c           97 g          112 t
ORIGIN      
        1 cttttggtcc tcgacacccc agctttaatc aggcattagg aaaagggagt gaagatgtta
       61 tgaaaatgcg gcgctggcct ttgttcagcg tctgtcatgg cattgacttc cctgacacaa
      121 tgctacaatg catgacggat caaagtaatt aaagttccaa taatttacct tcctctgttg
      181 cgtgtcaagt ctgccagacc ggctgctctc aggcccttca ttgatttcct caccactatc
      241 agagcgcgat ccttaaagac agagagacat gagggcaggg tatgtgtgtg tgtgtgtgtt
      301 ttaataactt tccatgctga tataatagca acgcttcaga tgtttaacca ttaatgatca
      361 cagacagatg acggagatag agagacgagc gcgtctgagc cctcctcgcc cg
//
LOCUS       KCHQ01000539             721 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 60718cha ultra-conserved
            element locus uce-1087, sequence.
ACCESSION   KCHQ01000539
VERSION     KCHQ01000539.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 721)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 721)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60718cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>721
                     /note="ultra-conserved element locus uce-1087"
BASE COUNT          200 a          172 c          166 g          183 t
ORIGIN      
        1 agagctgacg caccaaccaa acacaacaca ctgtgcaaat ggactcgggg agcccaaaac
       61 agcggcacat ttaagaggca tagtgggaaa aattccacca gtctgttttg cattctcagt
      121 accaacactt agaccaaagg ttttcacagc ttttgttggt tttgtatttt tctctctctc
      181 tcctttggaa gcagaagtcc tttgattctc aactctctct gtaaaaacat taaaaaagat
      241 aatccattgg atctaattga cacaaagccc tccgtccccc ctcctcccct gcctctgtcc
      301 tccgcctatg gccctcattt cttctgagaa aggccaagtg tttttgtcct gtaaatacca
      361 cggagcagag acaaaaaaga cgtctttaaa atgcagtcta caatccatta cacaaattcc
      421 ccctgcatat ccattcagta attattcatt agaaaacatt taacgtcaca gtgaatttca
      481 cactaggcag tcgaaacaca atggaggaga tttggcctat tttggggtga ggagttgggg
      541 aggggttggc tgtacagagg aagggtgaag gcgaaggacg gggaggaggg gagcagtatt
      601 tgtctgatct gagaacctct gaaacggggc cgtcttgaga caacgggaca gactaaatag
      661 tgcagtaacg gtctgtgccc cgctgctcgc tgtgacactc atttagtgtg ccccgagggc
      721 g
//
LOCUS       KCHQ01000540             526 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 60813cha ultra-conserved
            element locus uce-949, sequence.
ACCESSION   KCHQ01000540
VERSION     KCHQ01000540.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60813cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-949"
BASE COUNT          102 a          160 c          135 g          129 t
ORIGIN      
        1 ttgaactttt gcaacaagcc ctttccccta aacaaaaaca caaaatcttc cccttatctc
       61 ctttctctcc ctcctggtct tttttctccc tcctgctctc ttgtttcttt cctctgtaaa
      121 gtcagtggtc cgactctctc aaaggagccc agagccccca gcccgctcct attggttcct
      181 ccttgctctc ccacactgag tgcccatggc tcctgaagtg atgctctttg tgtggggttc
      241 aggggtcgtg cctattagtg tgaagaaagc cctgctgggt cttatcccga cccggaggag
      301 gacgcagggc tcttcacccc aacgtcggcc cggccaaccc cctcccccgg acgggacact
      361 ttcatccttt gtcaggaggt caatgagcgg acccccagag gggaaggagg gcccccacca
      421 ataatgatat gcatgacagt cattgtatga cccccatggg ggggtcatgg ttggttgagg
      481 tgggtaggac aagggagggg aggaccggcc gcgtaactaa ggatgg
//
LOCUS       KCHQ01000541             718 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 60859cha ultra-conserved
            element locus uce-1221, sequence.
ACCESSION   KCHQ01000541
VERSION     KCHQ01000541.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 718)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 718)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60859cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>718
                     /note="ultra-conserved element locus uce-1221"
BASE COUNT          205 a          142 c          139 g          232 t
ORIGIN      
        1 gcgagtctag agtgagtacc aagtggggac atgttgatta tgtatgctag gagtggttca
       61 gtcttttatt ggaaaattta cacccgtgca gtgatttata taaatcagta gtgcccacaa
      121 agcagtaaaa ctctaattgt ttcttccatt ttgaaagtct agcgtccatt aaggatgcag
      181 tgagtaataa aaaggacttt taatcaatcc tctcttgttg atgagttgat gtgtgaatgg
      241 gctatcctac ctgacagtgc taccatatgt tgatttcttt ttctaatagc caacaaagag
      301 atagagggag cttagttcat tgtaggtgaa tgcctttacc atgtaacttc atgaaaatac
      361 tgtgaagaaa gagggcaatt tgtccgaata gtttctggtc tttgaccatt attctaatgt
      421 gacaaaacac ttgcttaatg agaacatttg cctctttttg ctatagtcca cttctttgtt
      481 gccattcact gaaaactact gtcttcaagg attctgatgt tcgacaggat ccaaaccctg
      541 acaaagaact gaaatgaata caaccctctc atcgtctcaa tagtagtaac tctgacaata
      601 ttataaatta gtttcaaagc aagtgtagta gcatgtcacg ttgctctctt ttgcccacac
      661 tgcagtctct gtcatgaccc tttcattgtc agattagact ggccgacccc tcctcgac
//
LOCUS       KCHQ01000542             634 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 60930cha ultra-conserved
            element locus uce-1220, sequence.
ACCESSION   KCHQ01000542
VERSION     KCHQ01000542.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="60930cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-1220"
BASE COUNT          213 a          127 c          118 g          176 t
ORIGIN      
        1 cctcatgatt gaaaacacag ttgaagtgta cacacttgca atgtgcaaca ctaattccaa
       61 taaacccttt tcctacataa tctaaataat tttgctttaa ttataaccac cataacaatg
      121 agcctcagtg agataaataa ataacttcac tgtcctccct ggaattgtgc tgatgcggag
      181 gcctgcctag gcattataaa cctaattagc agaagattac tatgcagtgt gcaaggctgt
      241 ggtccagaaa gacatcatta ggtcttctga tggggatatg ccttcagcac attgattctt
      301 tttcgctcca agaacaatgc agattgcaga ctttataatt gggctttcag gtcacttgtg
      361 acttcacttc caccatgtgt ggctggcgat ctccattcaa acaaaagaag ccaataacaa
      421 aaagaccttc ccgctgagct caagaaataa agaggatgtt catggattat gagacgcgcc
      481 gacaagactt ggataaataa aaatcatgtg agcaataaat aatgtcggct gacataactg
      541 ctgtacagaa aaagatcata aagctttaga ttcagtcaga tattctggaa aataatgcag
      601 cattgtgtga cttaatttag cataaatgac ctta
//
LOCUS       KCHQ01000543             378 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 61024cha ultra-conserved
            element locus uce-1223, sequence.
ACCESSION   KCHQ01000543
VERSION     KCHQ01000543.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 378)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 378)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61024cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>378
                     /note="ultra-conserved element locus uce-1223"
BASE COUNT           98 a           89 c           63 g          128 t
ORIGIN      
        1 ggtatattga gtgtagtcat gaagagtcag atactgtaaa agcccattct tttttgcctt
       61 cagggggtgg gaagcaccat cacagtatca caggtatgtc ataacttctc ctgatcctgt
      121 tttcattttt ttgtacctcc tttgtttctg tatgtaacag cctcacagtt ttccactgca
      181 cagaaccccc ctccctcaca ctactggatc aatgctaatg ctatcatgaa ttacagtatt
      241 tcaagcttga atttacattt ttttacaaga gtggatgaga atttcaagca tttccatccc
      301 acctgtaggg accacagact cttttcgact catactttga agctacactc atgttatcac
      361 catattctgt gtgtacaa
//
LOCUS       KCHQ01000544             403 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 61115cha ultra-conserved
            element locus uce-50, sequence.
ACCESSION   KCHQ01000544
VERSION     KCHQ01000544.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61115cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-50"
BASE COUNT           87 a           65 c          115 g          136 t
ORIGIN      
        1 taagcaacac tgattgctgt tttaatgact tccttccagt gctcaatata ttggcagtga
       61 gcgagggtag ctgtgtgtgt gtatgtgtat gtgtgtgtgt acatgtttgc gtgtttgtga
      121 ggccaggctt atgtgagtgt gtatgtgctt gttctgcata gatctgtgtg tgtgtttgtg
      181 tgagctggca tgtgtgtgtg tgtttatcag ctcagtgcag atgggtggca gagtggctct
      241 tgcagccaaa tgattcagta tgctaatgag ttgttatctg tggtgctgca ggaacaatat
      301 actgtctttc tcacagtggg aatccagcct gctgggaaca gattacactg cacacaccgc
      361 caaggtagtt atttatattt tcacacagag tagtagaaga tac
//
LOCUS       KCHQ01000545             280 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 61200cha ultra-conserved
            element locus uce-1225, sequence.
ACCESSION   KCHQ01000545
VERSION     KCHQ01000545.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 280)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 280)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61200cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>280
                     /note="ultra-conserved element locus uce-1225"
BASE COUNT           64 a           68 c          105 g           43 t
ORIGIN      
        1 atctgcagtg gagggaaagc gagacaagat gtgctgcgtc cgtggcgcca ccggtgcgct
       61 atctggggac agagtgagcg acggcgacgc gcagacaccc cgcttttaga tggctccaac
      121 atttggggtg caaaacaggt gtcagggaag tgtcgtcacg aaccccggaa gccggaggag
      181 gtgggaacat cagagggaaa gatggcagcg aaatccgatg gtcgcggggt cgtcaccggt
      241 ttcgcccagc tgcacaacct ggacgaggtg gtggggacgg
//
LOCUS       KCHQ01000546             808 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 61299cha ultra-conserved
            element locus uce-56, sequence.
ACCESSION   KCHQ01000546
VERSION     KCHQ01000546.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 808)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 808)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61299cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>808
                     /note="ultra-conserved element locus uce-56"
BASE COUNT          223 a          213 c          155 g          217 t
ORIGIN      
        1 gatcgcattc caaagctgga ggagtttctt ttttctcttt tctcatctgt gatgcatccc
       61 tttattgtta tgctgacctg cacttttaag aaatacactc cggcaatgca ggagggaaaa
      121 catcagagaa gacttcaggt atcctgttag acagtaattt gatccagagc gataagatct
      181 gcaaatgata gagaccgtgt actcatcctg tcttttttga tggacaggct ctgcccaacc
      241 ctcctacaca ctgacaagta ggaaatatgt ttcagggaat gacactagca taccctctta
      301 cacttaatca ttgtcaatca ctctgcgcac ttggctcgtt gggtaatagg aacagatcca
      361 gcatcgcatc ccctccaatc tgtttggctc tcacacggga ggtgcatgct gttttcatgc
      421 ctgtgtggga tggcttcaag ctgttttctt atcaaaaggc ccattcagac attctctttg
      481 agaggcatcg caaacctcag atctcacagc ctccgttcaa ccacatgtct tgatttaaga
      541 ggccagaatc agatttgctg ccacgaagag ctgtcactgc taaagaatgg gatgtgattt
      601 atcatcctga accacacaca agactgataa ccagagcgct agcatttgga cgcatatgtg
      661 cacacgcacg aatgtgaggg tgcacatgta cacacacaca aaccaactcc ccacccctcc
      721 acctcacata aatacccaaa aaaacagatc aacacatgtt ctcgagctca ctcatcttct
      781 ggctcaatca ctcctatatg ctttcacg
//
LOCUS       KCHQ01000547             357 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 61393cha ultra-conserved
            element locus uce-54, sequence.
ACCESSION   KCHQ01000547
VERSION     KCHQ01000547.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 357)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61393cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>357
                     /note="ultra-conserved element locus uce-54"
BASE COUNT          108 a           73 c           63 g          113 t
ORIGIN      
        1 gcacaacagg tgatgcaaat gttaaaagct tgtctcccaa acttcaactt ctcctcacca
       61 cttttaaaat tgttctgcac cataaagcgg caacaatact caaaaatatg attcttcata
      121 aacagcgtga atttttgtga tgtggccatt ggtaaaaatc cttttgggga tttcgatatc
      181 taaaagagag aggtttatac attagcgctg tagttgcaaa acactgttga tattcaaatg
      241 attattgtgc aaaatctggt ataagcttct gtgtgagagc tcttctaagt gcctacaact
      301 attgctaatt cccctcgcca ttgtgggctg aacaaaggcc ttaatcccat ttcactt
//
LOCUS       KCHQ01000548             589 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 61532cha ultra-conserved
            element locus uce-839, sequence.
ACCESSION   KCHQ01000548
VERSION     KCHQ01000548.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 589)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 589)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61532cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>589
                     /note="ultra-conserved element locus uce-839"
BASE COUNT          141 a          119 c          182 g          147 t
ORIGIN      
        1 cccccagcac cccacagttt ggacagtttg ggggctcggc aggggtgtgt gtccatctgt
       61 gtgtggctgc atgctcgtgt gcttgactgc tcgcgtgtgc atgcaagcgt gcagcctgta
      121 tgcatgtgta tgtatgtgca tgagagaggg ggtttatgtt gagggggtgg cggtgaggag
      181 ttggagggtg ttaaaagaag gagtgctggt ggtggtgggg ggtggctctt atttggctgg
      241 gtgtaaaaaa atgcccccag gtctcctgat ggaagagaca ggtattagct ctgagacctc
      301 catagtccca gcttgccatt agtttcctct ccagctgcac caggatccgg actatgaatc
      361 tgccatggct ggtcattcat cagtttcaca gtccgcacca gcacacacac acattccaat
      421 aacaacactg tgaaatagtg agtgagtgag aaagagacac acagagagag gggatggagt
      481 gagtgagaga gtaaaagtgt gagaaaaata tcttgtcata cagagacttt tacttcagcg
      541 agtgtgtatg gccactacat actgtacctt tgactcaaat ggcgggtac
//
LOCUS       KCHQ01000549             631 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 61617cha ultra-conserved
            element locus uce-1168, sequence.
ACCESSION   KCHQ01000549
VERSION     KCHQ01000549.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 631)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61617cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>631
                     /note="ultra-conserved element locus uce-1168"
BASE COUNT          163 a          148 c          136 g          184 t
ORIGIN      
        1 gtaactaact ccatgactgc agctgtatgc cacggtggca ccatgtttgt tgctgtccat
       61 tttctatcca gtgttctttc ctgtcctcta catccctcac atctgccatc ttcgctttgt
      121 ctcttacatc cactcacgtt acagtcatat ggccttggga ttctgtgtca agcatttctc
      181 tctcctcctc ttcatcactt ccatctcacc tttttccttt gtacccaaca tccccctctc
      241 tggtcttggc cttccacgct tggaggaaca gcgtgaggcg gcatggcctc catgcggctg
      301 actgattatt gtaattcata cactttaatt agctgcacaa accattagcc acaattagac
      361 tattacataa cgttttgtgg caggagccag ccccaagact ggctttatct gctggagggg
      421 ggagagggga aaagagggag agagacagag agaggggcag gagggtaaaa tgtgtttagc
      481 taaaccatca gtgtatatgt gtatttaaac tacagacagc taattcagta tgctttaaaa
      541 gtaaaagtgt ttcttgttat gcagcatgtc aaagggaagg aagattaaat cacaggcagt
      601 agacaacaac aactaagtag gaaataggtt t
//
LOCUS       KCHQ01000550             453 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 61788cha ultra-conserved
            element locus uce-1139, sequence.
ACCESSION   KCHQ01000550
VERSION     KCHQ01000550.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 453)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61788cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>453
                     /note="ultra-conserved element locus uce-1139"
BASE COUNT          124 a           89 c          103 g          137 t
ORIGIN      
        1 ctctcctcaa tggcaaagtc aaaatggcaa agccctccaa tcacattact gtatacccag
       61 gaacatttaa atgctaatgt tataagctca catgcctaat atgataagct gacaagctta
      121 ttataagctc tgaagtttta agagttttct ccattagtta tcacaggagg cattaaattg
      181 catcactgca ctatgccaga aggtatggag ttaaattccc ctgcagaaga gattattttg
      241 cttggtttct gacagcgcta tacagtggca ggattgcaca tgatggtttg taaagagagg
      301 gaggtgcaca gagagtggag cgcaagtggt ttgagcttga tgtgtatgtg tgtgcgcacg
      361 tgtcttatct actcgtttgt tcagtatatg tggctatata gaggataggt tatccgatgg
      421 agagccacat tctctgtcat ccctcctctc cct
//
LOCUS       KCHQ01000551             369 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 61981cha ultra-conserved
            element locus uce-833, sequence.
ACCESSION   KCHQ01000551
VERSION     KCHQ01000551.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 369)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 369)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="61981cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>369
                     /note="ultra-conserved element locus uce-833"
BASE COUNT          108 a           62 c           69 g          130 t
ORIGIN      
        1 tgtgtatatt tatggtttat ttcattatat ttgcaagttt aaaagatttt aagtttgcca
       61 aaattgtggt tacaccattt cgtttcttaa aagggggaca aatagaaaaa cagctttaga
      121 agtacgattt ggaaacgttc tccatagtca aagaatgcac tgctatattt aactaattga
      181 agtgtataaa catacatgct gtgtgctaga tgttatgcct ttactgcctg tgttctgttt
      241 gtcttgttaa atgaaaatct tttaattatt taatctaatc acagtcttgt tttttcaacc
      301 actcggtgaa cccctgagac atgggacaac ccctgtagcg aggcttcagc ccatttgagg
      361 gccaagcag
//
LOCUS       KCHQ01000552             247 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 62064cha ultra-conserved
            element locus uce-1166, sequence.
ACCESSION   KCHQ01000552
VERSION     KCHQ01000552.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 247)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 247)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62064cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>247
                     /note="ultra-conserved element locus uce-1166"
BASE COUNT           53 a           56 c           56 g           82 t
ORIGIN      
        1 tcggtggttg agtgaagaag ccaggcagag taggtagtta aagagcagaa cagtgcctta
       61 ggggtactca gtgtatccgg actcacactg ggaaaagtgt atttatcaac ttaatagcag
      121 gtgtctgatt gaacatgact atgattacag taagttgttc ctccttttgg ctcctctcct
      181 cctcctcctc ttcttcctca tgtgtctcct acctgcctgt gaggttttgt tttcacatct
      241 gcttttc
//
LOCUS       KCHQ01000553             555 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 62146cha ultra-conserved
            element locus uce-1167, sequence.
ACCESSION   KCHQ01000553
VERSION     KCHQ01000553.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62146cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>555
                     /note="ultra-conserved element locus uce-1167"
BASE COUNT          151 a           95 c          142 g          167 t
ORIGIN      
        1 tttgatgcca tgaaggcagg ggtcacctgg ctcacacagt ggacctttta atgtgagaag
       61 acaattcttt gggtctgggg gagcatatgg atatgtgcga ctttttctgt ttagtccatg
      121 cttgtgtgta atatctgtgt gtgcatgcag gattatccat gaagatggct tttctgggga
      181 tgacgtgaag cagtataaga ctgtggtcta cagcaacacc atccagagct tggcagccat
      241 cctccgagcc atggactccc tgggcatcga gtttggagac aaggacagaa aagttagtct
      301 tacattcact tacagattgg caagaaagtg agatttgggg gttgaaatgt gacagtgcca
      361 acgcagaact gggttgttgg agattgtttc tctcatgctg ctataaagca caatatctgc
      421 ttgggttaag atgtctgata aagtcatcac atggactgga tgctagacaa atttgaattg
      481 aaaattgaat tgtcattttc attttttgga aatatttgac tttgtaccat cacaccaggt
      541 gataaataat agatg
//
LOCUS       KCHQ01000554             268 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 62323cha ultra-conserved
            element locus uce-1165, sequence.
ACCESSION   KCHQ01000554
VERSION     KCHQ01000554.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 268)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 268)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62323cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>268
                     /note="ultra-conserved element locus uce-1165"
BASE COUNT           71 a           78 c           67 g           52 t
ORIGIN      
        1 gtaaagaaca cgattcaccc taaggccatc tccggcaggc tgaatgatgg tgcatccttg
       61 gccctgcatg gaggacagca cacaaccctc catcacagtg ccagtggacc attacccagg
      121 gactgcaaca gccatccgca ccaagcaggc ctcctccact gccccatgaa gctaatcatg
      181 tgatttgatg caatgacaga gtaatgacac agattggtgg tgtgttcagc ttccccctgc
      241 tggagactac agaggaggtg gtgaacac
//
LOCUS       KCHQ01000555             203 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 62424cha ultra-conserved
            element locus uce-702, sequence.
ACCESSION   KCHQ01000555
VERSION     KCHQ01000555.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 203)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 203)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62424cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>203
                     /note="ultra-conserved element locus uce-702"
BASE COUNT           46 a           60 c           58 g           39 t
ORIGIN      
        1 tgatccgcct caccccgacc caggtgaaga tctggttcca gaaccaccgg tataagatga
       61 agagagcccg ggccgagaaa ggtatggaag tgacccatct cccttctccc aggcgggtgg
      121 ccgtgcccgt cttagtcagg gatggaaagc catgtcacac tcttaaagct caggacttgg
      181 cggccacttt tcaggccggg atc
//
LOCUS       KCHQ01000556             232 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 62519cha ultra-conserved
            element locus uce-1000, sequence.
ACCESSION   KCHQ01000556
VERSION     KCHQ01000556.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 232)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 232)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62519cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>232
                     /note="ultra-conserved element locus uce-1000"
BASE COUNT           70 a           43 c           58 g           61 t
ORIGIN      
        1 agagattggc tatgaaacac aaggtgtgac agtattgcaa tatgttatag tatgcaggca
       61 gagctcatca ggaaagagag gacgagcggc tttgttccaa atgtcacgat gcatatttat
      121 gggcgcactg gagtggctcc ctgtataagc accattcacc atctatcaag ctaaaacact
      181 acagtgtctc tttgacaact tggtaggata gtgttgtgtg acaaagtgat ca
//
LOCUS       KCHQ01000557             233 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 62619cha ultra-conserved
            element locus uce-700, sequence.
ACCESSION   KCHQ01000557
VERSION     KCHQ01000557.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 233)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 233)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62619cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>233
                     /note="ultra-conserved element locus uce-700"
BASE COUNT           68 a           51 c           42 g           72 t
ORIGIN      
        1 gacaagaaaa atatcatata cacttttaat gagtgtgcct gccccaagct tctgttttta
       61 atcacctttc cgtgtgacat aatttgctgc aagattgtat atgcttgagg gactttcagt
      121 tcttgtcaac tcaagagcat ttgaaccaat caatacctgt ctatcctgtg gcacactcat
      181 agttggccat taggaaagag ctgcttaaag taagctcagc caataccatt agc
//
LOCUS       KCHQ01000558             239 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 62870cha ultra-conserved
            element locus uce-707, sequence.
ACCESSION   KCHQ01000558
VERSION     KCHQ01000558.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 239)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 239)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="62870cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>239
                     /note="ultra-conserved element locus uce-707"
BASE COUNT           47 a           60 c           79 g           53 t
ORIGIN      
        1 acagctgcag gcgcaccgtc tcctggtccc agttgaggac cttaagtgcg aagtccaccc
       61 cgatggtggc tcggtagttg gggctgaagt tgtgatggac ataccgcttg atgatgctgg
      121 tcttgccgac cccgaggtcc cctatcacaa gaatcttata gagatgctcc ttctggtggt
      181 tgttctgcat ggcgagcgag gaggagggcg agagctgagc atgaatccac cgagcgggg
//
LOCUS       KCHQ01000559             276 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 63048cha ultra-conserved
            element locus uce-1006, sequence.
ACCESSION   KCHQ01000559
VERSION     KCHQ01000559.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 276)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 276)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63048cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>276
                     /note="ultra-conserved element locus uce-1006"
BASE COUNT           74 a           64 c           47 g           91 t
ORIGIN      
        1 aacaatttat ctcatgattc attgacaaaa aaaaaaagaa atcctgtgtt tttgtattta
       61 tgtctgcaac ttcatctttt tatttgttag atctatggca ttctgacaat gaacaagcgc
      121 actcagttat tggaacagct gcagtttgtc cagttgaaat gcacacctcg aggttagaga
      181 ctgtttccct ttgcctcacc atgctgcacc acctgtgtct gactctgctt gggttgtctg
      241 tcctcttgct tgcacacaca catgcacaca tacaaa
//
LOCUS       KCHQ01000560             401 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 63132cha ultra-conserved
            element locus uce-1009, sequence.
ACCESSION   KCHQ01000560
VERSION     KCHQ01000560.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63132cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-1009"
BASE COUNT          127 a           70 c           87 g          117 t
ORIGIN      
        1 gagagagaga tagagagaga gagatagaga gagagcaaac tacagcggct tcaagtattt
       61 cacattacat agaatactct gtataaatta gttaacatat actttcagat cctccatatt
      121 cagacatata ctatggcata tatacagagt acaataaatg ctcgctcatg ttgtgtcatg
      181 tgtttgtatt tttcctgtag tcagtcgttc atttgttccg ccttttttcc tgtgtagaaa
      241 aatccctgag aacgttctgg ttgacaatta ctgaaggttc cacacaatga actgtaacag
      301 tagaaagtct aatttctatg attcacatgc acagagggaa atgacactgg cctagtctgg
      361 aaataccgta caatggtggc tgcagagatg agaggggact g
//
LOCUS       KCHQ01000561             394 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 63222cha ultra-conserved
            element locus uce-1008, sequence.
ACCESSION   KCHQ01000561
VERSION     KCHQ01000561.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 394)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 394)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63222cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>394
                     /note="ultra-conserved element locus uce-1008"
BASE COUNT          129 a           83 c           70 g          112 t
ORIGIN      
        1 cttctctcca catagtttga cactccatca cactccgata tgtcctccat ttaaagaaac
       61 atgaatcttt ctaataccat cattaataaa gataacatat ataaaagagt gtgtcaggct
      121 ccatcagggc tttcatctct tctataatga ggttaatgca gagacgcagt gattacccta
      181 gcaatgcaaa tgaaggccaa atgataactt gcactattta aataaggtaa tagcgattac
      241 tctacgttat tcaaatgagg acagacgctt tgaactgagc gctttgaact cgctgctcct
      301 tctccaaaac aaatgaaaga gattgaggag gactgacttt ggactcattc ggtgtgtatc
      361 ctctaattca atgtgatgta aaccaagggc aaca
//
LOCUS       KCHQ01000562             894 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 63321cha ultra-conserved
            element locus uce-708, sequence.
ACCESSION   KCHQ01000562
VERSION     KCHQ01000562.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 894)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 894)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63321cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>894
                     /note="ultra-conserved element locus uce-708"
BASE COUNT          213 a          227 c          228 g          226 t
ORIGIN      
        1 tatgttggtt taaccttgct ggtttgatcc ttcctcatat ttccggggac atgaaccctc
       61 ccgctctccg tacgctaaca gccaccaaaa gagttgcggc gctgcggccg tgtatctcgc
      121 cacaacaggt aaactgagag aggacagtgg tagaagaatg aaggagaggg agagacatgg
      181 gaataaaaag ataaacagtt tgaccttctg tttctgccaa tttccagtgg tcgcccccct
      241 ccttagcctt ctctttccct ctttcgccct cagccctgtg tcggacgaat cctttttgga
      301 gggataaata gcactgctgc gctttgatag ccccagtccc aaacagcagc taccgataaa
      361 taaaaggaac tttctccatt tatctctgtg agaaagaagt tcctattagg gtccccatag
      421 ccacagggcc tttccctcct tcactgcaca gctttgtaga ttgcctgctt ggtttaaggt
      481 gctattgagt gctcaccagg acaattacat gccaggaccc ccctccggaa atgtccctcc
      541 cctccacttc cctcgcccgt cctgtacctc tgtgccagtg ttgcaggaga tgctatccgc
      601 gatagggccg gatgggagcg gtgtgtgcgg cgcgtcgtgt aattgcgtga gcatgtgtgt
      661 gtgtgtgagc tccccgctgg aagacgggac ggaggggggg gagtgataat ggccctctga
      721 atggtatgga ataaagtatc attgcttagt gcctggagtc agacagtgat gctaatgcaa
      781 atggttttta cctccacctc tctgtctgct gtaatgatag ccccacaaac agtatgtatg
      841 aagaaacaga gcgagggagg tatataaata aaaatagggc acacctcagc gaaa
//
LOCUS       KCHQ01000563             337 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 63411cha ultra-conserved
            element locus uce-709, sequence.
ACCESSION   KCHQ01000563
VERSION     KCHQ01000563.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 337)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 337)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63411cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>337
                     /note="ultra-conserved element locus uce-709"
BASE COUNT          116 a           98 c           52 g           71 t
ORIGIN      
        1 ctctctctct ctctcactct ctcacacaca cacacacact caccatattt tgcatagaca
       61 cacacaaata aaacacagga gtttgttaac tcacactcac gcacacactc atgacaaaca
      121 cacagcgctc ccacgtttca cacaaaccca catacacact cggtgactca cacaaacaca
      181 cacccttgcc cacccccaga cttgcgatgt gttactgtga tgatgcagag tgtggtggaa
      241 ggtgaagaat aagacaacgg aagacaggtg atgctaaaat gaacatttat aatgactgct
      301 gttgctgtcg caaaataaga atccttaaaa aaagacc
//
LOCUS       KCHQ01000564             323 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 63601cha ultra-conserved
            element locus uce-554, sequence.
ACCESSION   KCHQ01000564
VERSION     KCHQ01000564.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 323)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63601cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>323
                     /note="ultra-conserved element locus uce-554"
BASE COUNT           73 a           57 c          108 g           85 t
ORIGIN      
        1 tcagttagac ctctgtgttt gtttgactct ctctgacaac aaggtcagtg gcattgccca
       61 gtaattgtcc taacggcctg tatacctgtt gggtggaggc gagtaatgag agtttttcat
      121 tatgggcggg acgggtgagt gcgcctggca gatgctgaca ggcagcagat gtgtaaagtt
      181 gggggtgatt tgtaaagggg tcaactgcat cacagaggag atggagggcg atgtggggtg
      241 ggggtaaatt atgctgaggg gcattgtcag tcatactgcg cccctgtcac aacaaggtaa
      301 aggtcagttc aagcgctgat gtt
//
LOCUS       KCHQ01000565             231 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 63696cha ultra-conserved
            element locus uce-63, sequence.
ACCESSION   KCHQ01000565
VERSION     KCHQ01000565.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 231)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 231)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63696cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>231
                     /note="ultra-conserved element locus uce-63"
BASE COUNT           39 a           57 c           59 g           76 t
ORIGIN      
        1 tcactttctg cctttgattc tgcactgaca gttgtccttc agccctcctt taaagtctca
       61 ctttcaatcc ctaatggctg tcatgtcgct gcgctctctg gactcttact caaagtgtca
      121 ttggcataat ggtcggcagc cgttggcctc ttttgatcat ccatgctgtg tgcgagagca
      181 actggagccg aaacagtgag gtgtctgagg tgtgtgtgtg cgtgtgtgtg t
//
LOCUS       KCHQ01000566             578 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 63788cha ultra-conserved
            element locus uce-837, sequence.
ACCESSION   KCHQ01000566
VERSION     KCHQ01000566.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63788cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-837"
BASE COUNT          157 a          141 c           98 g          182 t
ORIGIN      
        1 ctcctttaag atcctctcac aattggctgc tgaagaaaac tggcgtgact ggctcggctc
       61 agtatccctg ttgatctaca ttatcatgtc tcattagagc gatgatgttt gacagatagt
      121 tatcagatgc atacgtccaa atgtatacat cactgacaag cagctttcat gttggcgatc
      181 atattgattt ttaaagcgtt actcttcctc attgtgtatg tgtgtcctaa tctgagaaat
      241 gaatgataac ctcttcatca ctctaccccc tgagtgttct tactggaagc catattgatt
      301 ttgttagtct gagagtcctt gcattgcctg gcctttacct cagggacaaa tctaattgtt
      361 tatctctgga cagacttctg cctttactcc cttctgtctc attatgtgcc aagatttgtc
      421 aagtcaagtc tctccacact ctcaaatctc gctttacaac atgtcgttcg gcagaacact
      481 acagatggct tacttatcaa cagaccctcc cacatggaat gttacaaaca tgacagcaca
      541 acacacttgc aaaaatatac acaaactgac atacaatg
//
LOCUS       KCHQ01000567             292 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 63982cha ultra-conserved
            element locus uce-909, sequence.
ACCESSION   KCHQ01000567
VERSION     KCHQ01000567.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 292)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 292)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="63982cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>292
                     /note="ultra-conserved element locus uce-909"
BASE COUNT           61 a           79 c           67 g           85 t
ORIGIN      
        1 tctccagtgc tggtgagtgt ttcttgttag gatttctggg gctcgccaca tccctcgcat
       61 cattacgggt tagtttgccc acagaaccgc taattaagag gggatttgtg taattgtgcc
      121 ttctgctgtg tcccatccgg cacatgcaat ttactgtcag ccctctgcca gcttttacac
      181 ttgtccagag aggcgtaccc catttataca cacattctgc tgcacattta ccagcagcca
      241 cagctgggga tcaatgccag tgccatggca gtgtcttaaa agacactgtg ct
//
LOCUS       KCHQ01000568             308 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 64165cha ultra-conserved
            element locus uce-906, sequence.
ACCESSION   KCHQ01000568
VERSION     KCHQ01000568.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 308)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 308)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64165cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>308
                     /note="ultra-conserved element locus uce-906"
BASE COUNT           94 a           57 c           83 g           74 t
ORIGIN      
        1 taggggggct gtggtcctct cagtgtggca catcaaactc tataaaggga atcatttatg
       61 tgccactccc tattactgaa cagcatggag acagctaatg agggccaagg caaaaggaat
      121 atatccacca ctttgctgtt agacagacac tggcagggaa agaaaaccag gagtcttcag
      181 ggaatcattg ttttcaggaa aaaaagggaa gaacaaaagg agtatgtgtg tctgcgtgtg
      241 tgtgcgtgcg tgcgtgtgta agcgctgcga ttaggtcaac atttttatca gttcaaaact
      301 gacagaac
//
LOCUS       KCHQ01000569             216 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 64300cha ultra-conserved
            element locus uce-900, sequence.
ACCESSION   KCHQ01000569
VERSION     KCHQ01000569.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 216)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 216)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64300cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>216
                     /note="ultra-conserved element locus uce-900"
BASE COUNT           51 a           60 c           59 g           46 t
ORIGIN      
        1 gttacggccc cctggatagg tcattactcg tccgtggcca agagctaaac tggagcaggg
       61 ctttttaaag aggggagcag gtgtgtttca ccataggggc tggagccggc ccaagaccaa
      121 acagccttaa cggtctttat ctccttcata atgaggccac gctctccaca cacccgaact
      181 ctgcccacat gggctaatgc tggaggtatg gagacc
//
LOCUS       KCHQ01000570             529 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 64383cha ultra-conserved
            element locus uce-901, sequence.
ACCESSION   KCHQ01000570
VERSION     KCHQ01000570.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64383cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-901"
BASE COUNT          165 a          141 c          110 g          113 t
ORIGIN      
        1 cttacatttc ataacagcca caacagtcac ccatacatag ctccacacat gaagatccat
       61 caacaaaaac ctcttaatat tttatctcca agtcgtacaa gcttacatca aggtgaggca
      121 gcgaggaaaa tgatcaatct aagctagaaa accacattca agtttaccat aaaagccatg
      181 gcagtacaat agcagactgt ataaccactg cactgcagta ctgtatacag ccaggtgctg
      241 atattcctgc cttttagagc ccacacaagg ctaaccatgc tgggtaactg atcaactaca
      301 gctgcctgca cgagccaaag gcaaacagag agagaaatag aaagcagagg gagacgaccg
      361 gcgacgaggc tggccgctcc tgtactcacc agcactggca gaacacagca gagacaccaa
      421 gagcacaatc accagcgtca ggatcttcac attcatttct gcactcccct ctggctctcc
      481 gctagtcact cgctgatata ctgtagtggt gtgtgtgtgt gtgtgtgtg
//
LOCUS       KCHQ01000571             476 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 64469cha ultra-conserved
            element locus uce-902, sequence.
ACCESSION   KCHQ01000571
VERSION     KCHQ01000571.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 476)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 476)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64469cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>476
                     /note="ultra-conserved element locus uce-902"
BASE COUNT          155 a           97 c           95 g          129 t
ORIGIN      
        1 tgggtaacac agtgaccagg tcaggtgtac agtgcatagt atgctttggc atgctgacat
       61 ccagaacata acagtggatg ttacattcag gaggaaggcc acaggttttg gaattaccag
      121 taaaaataga acaaatgact acgtgatcca taaaagtaaa accaacataa tacaaaaaga
      181 atccaaaccc tcataaattg aacactcaga ttaaggctaa ttcagtctgc tactgtacat
      241 gttttaaaaa tggcatcgac agtaacacag tttcatacgc ctgccaagta gcaaaactgc
      301 catttgggac atgtacactg atccgctcat tcttaaaaaa ataatccctc actgaaatga
      361 tgtgcacata ctgttttttt tttttctttt caatgacgtt gtgatgtggt gagtgcaggg
      421 ctgcgctccc tccacctgtg ttcacaatca ggactgatgc tgtgatgaaa atgagc
//
LOCUS       KCHQ01000572             663 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 64566cha ultra-conserved
            element locus uce-903, sequence.
ACCESSION   KCHQ01000572
VERSION     KCHQ01000572.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 663)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64566cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>663
                     /note="ultra-conserved element locus uce-903"
BASE COUNT          178 a          171 c          150 g          164 t
ORIGIN      
        1 ccccctcctc ccccccacac cggcccaatc cctctatttc agctccctcc atcttctgag
       61 tggtcatctg ttgattacac gttatattta cctctgctgt ctcactcttt cgctgcctca
      121 cacaggtcct ggctaacaca cacactcaaa gcattcaggc atacatacat aaataacata
      181 catacataaa tatttaatca aataaataaa tcactcggcc cagcagccct ttctaatcaa
      241 gtgacatcaa tcagggagaa ctatgggtaa agaggccttg tggctgacgc ctactgagcg
      301 cgcccagagc gctggagtag cgtctatttg agtccaaggg gggaaatata cgctccatgt
      361 cccattatag gagaagggct atcctttcgt cagcgcgccc attactcccc ctatcatttc
      421 cccaaatcta aaacctgttt tcaatcaaca cagccaaacg agtgcctgtc caagagaggg
      481 agagagagag aaaggagaga gagaccaaag gagagaaagc ggtagagatg gacagtgagg
      541 gtaggggtag agggagagcg atcgagggct ctttccttct ttcttccagt gattggagcg
      601 ttttgcattc tgtatgtgtg tgtgattgaa tccgtctcct aaattagggc tgtcgacttg
      661 agg
//
LOCUS       KCHQ01000573             327 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 64638cha ultra-conserved
            element locus uce-679, sequence.
ACCESSION   KCHQ01000573
VERSION     KCHQ01000573.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 327)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 327)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64638cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>327
                     /note="ultra-conserved element locus uce-679"
BASE COUNT           80 a           64 c           89 g           94 t
ORIGIN      
        1 tgaaaagctt attaaggtat aattcactgc tctgtctgtg tcatttgggc tttgtgttat
       61 cactgagatc attcccacac acacaccgac atgagtgtgc agacgccctg tgagtgagtg
      121 gcaagcaagc atgtatgtgt gtgtgtgtgt gttgggaggg gtgcttccat atgaaatgta
      181 cacgagggtg aatctcagtg gtgttaatgg ctttttaaat gtcagggaaa gtcagggaat
      241 gataaaggag agatctgtta tccactgtcc tcatgatcac cacggagcgt gctgctgctc
      301 tcacctcaac aaggagcctc agtctgt
//
LOCUS       KCHQ01000574             239 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 64726cha ultra-conserved
            element locus uce-655, sequence.
ACCESSION   KCHQ01000574
VERSION     KCHQ01000574.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 239)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 239)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64726cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>239
                     /note="ultra-conserved element locus uce-655"
BASE COUNT           91 a           28 c           68 g           52 t
ORIGIN      
        1 gaaggggatg gggggggtgt gggggggtac agcggagata aatcattaga gagcaggtta
       61 ttggaaatgc agggagataa aagagtgaag aagccagtaa ttgccttaaa gatcagacta
      121 caaagcatta ctttggattt tacaaggcca gccagcaaca aaagagcagt aatttatgag
      181 ctcagtgtaa aagaatagca taattacatt aaaaattaat gctaatgagg gctaaaatg
//
LOCUS       KCHQ01000575             366 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 64929cha ultra-conserved
            element locus uce-175, sequence.
ACCESSION   KCHQ01000575
VERSION     KCHQ01000575.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 366)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="64929cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>366
                     /note="ultra-conserved element locus uce-175"
BASE COUNT          113 a           96 c           51 g          106 t
ORIGIN      
        1 tgctcaatca ttttttccgt acaaatgatg tgaaaatggc ccattatggc aaggaacaaa
       61 gaggataggc cccatgttag agccaacccc tcattgatgc cctggtgact cggccagcca
      121 ctctcccaag gcctattcct tgattaaatg cataatccac tactccccat ccccaatgat
      181 ttagtgtgcc tttaaatcag cttgcgcaca cataaaaacc tcaaataaaa atcaccaaga
      241 aaaaccattg cactctaact gttctattaa aatgataccc agcccagcct ttcttctctg
      301 caataccgtt tattccacat gaatgcatat cttcattttt ttcataggta tgcatataaa
      361 atattt
//
LOCUS       KCHQ01000576             275 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 65021cha ultra-conserved
            element locus uce-174, sequence.
ACCESSION   KCHQ01000576
VERSION     KCHQ01000576.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 275)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65021cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>275
                     /note="ultra-conserved element locus uce-174"
BASE COUNT           54 a           76 c           76 g           69 t
ORIGIN      
        1 cttccattct catggggccg cagaggtcca gccagtccgg tagctggtgc ggtctcctcc
       61 tttgtcttcc cttccatccc agcaaagtgt agcgaaagag agcagagggg aagaagggaa
      121 gccccttacg ttcatgtgtt ttgattagca ggtaatgatc tttgatctaa tgcgctgact
      181 gggaaagtgc cgctcccatt gaaatccggt ggatgcttgg ccgacctgga gccagtgtca
      241 cttctcgtta gggcctgcag ctccatgacc tcccc
//
LOCUS       KCHQ01000577             432 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 65120cha ultra-conserved
            element locus uce-176, sequence.
ACCESSION   KCHQ01000577
VERSION     KCHQ01000577.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 432)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65120cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>432
                     /note="ultra-conserved element locus uce-176"
BASE COUNT           86 a          134 c          119 g           93 t
ORIGIN      
        1 gctggtccgg cccgccaggc tgagggtcgt ggtgtggctg gccgggcgcc aggacgtgtg
       61 cagggggcta tgccatggcg ttggccctcg caggctggca gcattgagaa gcgtaaaggc
      121 attcagtagc gtgaatgtcc ctttgtctca gagcagcgtg ccaggctagc tctaatgagg
      181 caactctttg tggcaggcct ctcaacatca agtgggctgg tggactcatt aacctgacta
      241 ctgcaaataa agcaggcagg cacaagagac gcctatgata gcacacttaa ggccccgctg
      301 aatcccccca ccgccgccat catccctcca cctcctccct ctcctctttt ccctccagtc
      361 tctcaggctt cccagggctc ctctgatagg aggaaatcag cctctggcct atttcaggtg
      421 tcccaaataa gg
//
LOCUS       KCHQ01000578             324 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 65201cha ultra-conserved
            element locus uce-171, sequence.
ACCESSION   KCHQ01000578
VERSION     KCHQ01000578.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 324)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 324)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65201cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>324
                     /note="ultra-conserved element locus uce-171"
BASE COUNT          107 a           65 c           86 g           66 t
ORIGIN      
        1 ggggggaggg ggcagggaca catttgattg atgatggtgt gaattaaaca gaaagagatg
       61 gagagaatcc ttttatcagg ccagaaacac gagtggatta aaatgtagtt gtacaacccc
      121 tctgtataat gcagcagcct ggtcgcatat cacgaggcac cagaagccaa gatgagagcc
      181 gctcgttatt attgccccct cctcgaccca ccacatgaaa ctttgctgaa gcaggaaaac
      241 agggacgaaa cacatgaaac agggctgaaa atagagttga aaagacgagt aggtccacag
      301 gaaattcatc tgatactatt ctgg
//
LOCUS       KCHQ01000579             261 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 65297cha ultra-conserved
            element locus uce-568, sequence.
ACCESSION   KCHQ01000579
VERSION     KCHQ01000579.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 261)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 261)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65297cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>261
                     /note="ultra-conserved element locus uce-568"
BASE COUNT           81 a           43 c           56 g           81 t
ORIGIN      
        1 tgtacatttt ctgaaaataa gcagtaaaac tagtctgaca gcacaatgcc gatgtcaaac
       61 aaaggctcgt cagtaatgtt ttatacaaat ccactgatat aataattata ctatccccag
      121 tctttagtgg aggttgattg ttcttgctgt gagctaacac acttaattgt agtatgcaaa
      181 tgagagcaat tacaaagctt ttaggtgaag agatgacagc tgaggttggt tttattggag
      241 gcctcatccg gttgtcatgg a
//
LOCUS       KCHQ01000580             634 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 65396cha ultra-conserved
            element locus uce-173, sequence.
ACCESSION   KCHQ01000580
VERSION     KCHQ01000580.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 634)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65396cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>634
                     /note="ultra-conserved element locus uce-173"
BASE COUNT          189 a          133 c          162 g          150 t
ORIGIN      
        1 ccactctcac aactccgcca ggctcggagt gagctagctt aactactggg ataatttccc
       61 tccagcaaat ggtcactgtg cccttgaaaa acatatttga ttattacttt ttctccccct
      121 cctctttttt ttcttttagc atcatcacag ccattttcat cacgcgctct gatgatggca
      181 cggcaaggcg cgttaagata acaccccggc accgccaggc ttttaacact taaacggtga
      241 aaagggatat tcagatttgt ccttgaacgt ttggatgggg cctgctgggc tgggacgaag
      301 ggagggaata cgggaaggag ttaaagaaat gcatacattt ttaagattca cttactttaa
      361 gaaaaagtga ggtagggagg gcatttatgc gagcacccac agtaagagat ggggaaagtg
      421 gggttgaagg gcagatggag gagttaaaga actgtacact ataaagtgtg aaggggaaat
      481 gattagtgga gagcgcacag tgaggcgggg gccttaggga gagtcgggga gcaacgggag
      541 gccaaagaca ccacacacac attcatttaa acaccatcta atctcaccta agtcttagct
      601 aaacatctta catacaaact caggcagaga aaag
//
LOCUS       KCHQ01000581             280 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 65489cha ultra-conserved
            element locus uce-172, sequence.
ACCESSION   KCHQ01000581
VERSION     KCHQ01000581.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 280)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 280)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65489cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>280
                     /note="ultra-conserved element locus uce-172"
BASE COUNT           92 a           44 c           44 g          100 t
ORIGIN      
        1 agagtttatt tgacagtatt tcagaatatc tttcagtaaa caagtttttt gttttttagc
       61 aaaatgtaat atatcagtac tgtcgcattt cataaaaata gttgttcacg tctttgaaac
      121 tacagtatca atgatacagt aaaccatatt tgtaggaata cagctgtaca aggtgaatag
      181 tacacaatta acactacaca gttatacttg atctcaatgg ggatttatga acgtgccatc
      241 cttcacaggt tccaataaag cagtttcttt tgtttctgta
//
LOCUS       KCHQ01000582             386 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 65584cha ultra-conserved
            element locus uce-569, sequence.
ACCESSION   KCHQ01000582
VERSION     KCHQ01000582.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65584cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-569"
BASE COUNT          116 a           79 c           98 g           93 t
ORIGIN      
        1 tttctgaagt ggatttgtgg ccttgtaatc ctgattaatt ttgacccgtt gtgctcattt
       61 taaacagagc attacagtaa gcgtgaacac agcaagctcc ggggcgaaac caggagctta
      121 gcggctttgg gaggcttagc tgcagatggc attttaagcc ggacttaata aattgtttcc
      181 attaaactta ccggcccaca catactggat tagaccagtg gaacaaagga aggagagagc
      241 gtgcagacga agaagagcaa aaaagcacac acacaactcc catcatgcac atctgactct
      301 gttaacatct ctctgaggcc gcatgaaagg tgaagacagg gttactgtgg tgttcaggga
      361 gatagaagct tttggacatg aatgca
//
LOCUS       KCHQ01000583             270 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 65676cha ultra-conserved
            element locus uce-777, sequence.
ACCESSION   KCHQ01000583
VERSION     KCHQ01000583.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 270)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 270)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65676cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>270
                     /note="ultra-conserved element locus uce-777"
BASE COUNT           44 a           57 c           62 g          107 t
ORIGIN      
        1 ccattttttg ttttgttttg tttccatttt tttctgtgtg cgtattcgtg tctgtctttg
       61 tgttcgtggt gtgtctcctt tctgtctgtc gtcctctctc tctcctccgg tcaatgctct
      121 gctggtgtct agctttgagc ttcgtgttgt tatttggaac actgatgacg taattctaga
      181 ggacgatgct ttcatgacag gagagaagat gtctgacatc tatgtcaggg ggtaaacaca
      241 cgattccatc gcatggctcg tacaactata
//
LOCUS       KCHQ01000584             319 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 65770cha ultra-conserved
            element locus uce-162, sequence.
ACCESSION   KCHQ01000584
VERSION     KCHQ01000584.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 319)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 319)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65770cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>319
                     /note="ultra-conserved element locus uce-162"
BASE COUNT           73 a           83 c           66 g           97 t
ORIGIN      
        1 acacacacac acacacagtg acagccacgg ccaatcgatt tgccacgctc tctctcccca
       61 atgctgacga tgcttgagtg gacgggctcc tggttgcctg gttcacagaa aagggtccct
      121 caaatgaatg tatttttacc tcttgcagga caatgtcgga tagggaagta aataattaaa
      181 ggaaagggac cctttttgac tgcatcaacc ctgccactgc tggtaagctc tactatccat
      241 tgtgactcca tttttgcccg tcctgctcag gatgaccgtt tttttttctt tttttttttt
      301 tgtcacatcg gtgtacctg
//
LOCUS       KCHQ01000585             208 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 65861cha ultra-conserved
            element locus uce-775, sequence.
ACCESSION   KCHQ01000585
VERSION     KCHQ01000585.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 208)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 208)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65861cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>208
                     /note="ultra-conserved element locus uce-775"
BASE COUNT           54 a           51 c           36 g           67 t
ORIGIN      
        1 gccttgtttt cctcatgtca gtttaattgt tcactgtcag gggcagagca gcggataaca
       61 agcttagcaa atgatgtctg ctgttgctac acattgatta atattttaca tgttattatc
      121 ctctgtccat taccacagca aattaaacta taaatcaccc cctctgctgg tgtcaccgga
      181 tcataaattg tctctcgcct agacgcac
//
LOCUS       KCHQ01000586             332 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 65966cha ultra-conserved
            element locus uce-773, sequence.
ACCESSION   KCHQ01000586
VERSION     KCHQ01000586.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 332)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 332)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="65966cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>332
                     /note="ultra-conserved element locus uce-773"
BASE COUNT           84 a           67 c           74 g          107 t
ORIGIN      
        1 ccttctcctt cttggctggc agagaacctt cctgttgtga tccgacttct ctcctttgat
       61 caaagaacag tgttaaagca ctgggagaag gaggaggtat gaaatatgaa tgaatacagc
      121 tgtgttttga tggatatgtc tcaaagtatc ccagtaagag actgctaaag gccaggaaat
      181 ctgtttgtgt tgtggaaata ggctcttcct cgcctgtttc tttaccagct tcatcttggg
      241 tagcttttca cttcatattt tagagatcct ttgttaggaa agagatcaac cccttatcca
      301 tgcatttgta ggaaactctt ctaggaggac ct
//
LOCUS       KCHQ01000587             451 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 66061cha ultra-conserved
            element locus uce-772, sequence.
ACCESSION   KCHQ01000587
VERSION     KCHQ01000587.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66061cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-772"
BASE COUNT          127 a          118 c           97 g          109 t
ORIGIN      
        1 caaagggata ctttaacatg ccattcatcc atatcaattc tcttcccccc catgaattga
       61 actaataagg ctgtgccttt gccctccagg gaggctcata atatccattg cagatatgaa
      121 aaaaagaaaa gaaaagaaag acggaggctc tggtgtttca cgttcgactt tcccttcaga
      181 ctaatcggcg cgccacagct cgttaggtcc gtgacgtgcc ggagctttac cgataagcag
      241 gggagacacg gctcaattac ccacagttac aatctttctc tctctcttcc ctcccgctgc
      301 ctgatgatga agagataaca tgtcaatatt tgatacaaac aacttcattt gcctaatggt
      361 gttcctggat aggcccatcc acaggtccgg aagggatggg agatctaaga aaaggcccgg
      421 agcaacactc ggcttagaca taccgtagcc c
//
LOCUS       KCHQ01000588             549 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 66133cha ultra-conserved
            element locus uce-678, sequence.
ACCESSION   KCHQ01000588
VERSION     KCHQ01000588.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 549)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66133cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>549
                     /note="ultra-conserved element locus uce-678"
BASE COUNT          151 a          115 c          114 g          169 t
ORIGIN      
        1 ctctttgttt ctgcgtagag atgtggagga catatttacc aagacggcag ggaggggtgg
       61 ggggtgaaga gaggaggaga ggcattagaa gcgtccacac atgagcaatt agtattccag
      121 atcctgatgg ttctaaacac aaaaaggcct caccaaatcc ccacggcgga ggtgtcagac
      181 ggaaaatgac gaaaatctgc tccttgacag ggagtcattt atattttagc ttcgttccat
      241 tatcttaacg aatccatcat cagccaatgc aatattaaca gcagaaaatc aactcattag
      301 atccaggggg atttaatcaa gattgcaatc atgtatgcgg ttcctggaga gttggcttct
      361 tctttttttt tttctttttg gtcctttcca cgtaattgcc gcatctcaga tcttaataaa
      421 ttattctcga tctgagattg atgccttttt tttcttgcct ctcacgccat gcactcactg
      481 tctccaacta taatatttac cataaacatt attatgtcat gggcacacag tttaaaatgg
      541 cctttagct
//
LOCUS       KCHQ01000589             294 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 66308cha ultra-conserved
            element locus uce-677, sequence.
ACCESSION   KCHQ01000589
VERSION     KCHQ01000589.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 294)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 294)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66308cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>294
                     /note="ultra-conserved element locus uce-677"
BASE COUNT           99 a           58 c           57 g           80 t
ORIGIN      
        1 ttattttggg ttatagacat aaattcactt gattcacctt aaaatataaa acacaaaatg
       61 tttgaatatc atttaaagta catccatcca tgcataaaac tactgcacaa agcaaactcc
      121 cttcactcag caagctgtgg ttgagtcatt cagggggttg ttagttaacc ctgagctcag
      181 aggatgatga agcaagggca taaatcacag agtgaaacaa ggcagactcc tccgattcat
      241 taatggaaat gatctgtcaa tatgctggag tcaattcaca cgtgtcagct gggc
//
LOCUS       KCHQ01000590             525 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 66403cha ultra-conserved
            element locus uce-674, sequence.
ACCESSION   KCHQ01000590
VERSION     KCHQ01000590.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66403cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-674"
BASE COUNT          130 a          141 c          130 g          124 t
ORIGIN      
        1 acacacacac acacacacac accaatagtt gcttctgtac ctgtctttgc tttttttcct
       61 tttttttatt tcagcagggt gaatttttat ctaaatgcaa agcaggtgat aggtgctcca
      121 gtttcctcta gaagtagctc ccttgtctgg gctctcttcc tgataagagt cctactttgc
      181 ctgacataaa agagcccggt atcatttccc ctgcctcccc aacaaccccc agctcgctgc
      241 cctcgccctt ccccgagctt cacaaagctg cctctatttg ctcccaattc agggcccaat
      301 tgcagataaa gttacagcaa atttgtttgg aggaagagct gctgaggcct gcggtccctg
      361 gggcaataac agccttgtct tgcaggggcc gtggggagag ctggcagcag caggagaaca
      421 gaacccaaca ccgctcagcc ccacaatggc ctgaactctc cgggagggaa agcaaaggga
      481 gaggagggga gggagagata aagaggaaca gggatggatg gattg
//
LOCUS       KCHQ01000591             494 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 66681cha ultra-conserved
            element locus uce-673, sequence.
ACCESSION   KCHQ01000591
VERSION     KCHQ01000591.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 494)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 494)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66681cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>494
                     /note="ultra-conserved element locus uce-673"
BASE COUNT          155 a          108 c          107 g          124 t
ORIGIN      
        1 ataaaagttg aaacatattc actagcatga ctgtgacatc aacgcatgga gtcaaacact
       61 catgaatatc acacaagatg accttgtttt acaatgggca gtgaaagtga gaggaagagc
      121 agcaagagat gtcagatctt gcacacaaag accactcatc acccactaga gaaacaacac
      181 acaagttcaa aacaggaggc ccagtgatta ataataactt cattaggccc aagctgctgt
      241 agcctgtcct tcagagcact tgagggaggt cttctcatat ggcttcctgc atcagatgag
      301 tgctatctat tgattatatt gtactgggcc tttttaatgg tgaaaaaagt gggctattta
      361 cagcctggct aagtctgctc ttcctgctaa tctaatcccc aagctactca tgtggtcatt
      421 ccttccaaga aagctgagag ctctgtgtaa ctttatacct gcctgcccct aaggagagag
      481 agagagagag agag
//
LOCUS       KCHQ01000592             244 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 66777cha ultra-conserved
            element locus uce-670, sequence.
ACCESSION   KCHQ01000592
VERSION     KCHQ01000592.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 244)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 244)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66777cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>244
                     /note="ultra-conserved element locus uce-670"
BASE COUNT           71 a           52 c           38 g           83 t
ORIGIN      
        1 cccgggtagc catgtaatgc cagtcactgc cctttccttc atgctgtata aaaacacaca
       61 catatatctg tgtatttgta acctgaatct tcttgtgtct gtccatgcag acaataaaaa
      121 aactgtacag taggtctagt tgcatgtaat ctgtactaat tattgacaat ggcattataa
      181 aatgcaataa aatacttatt acactgtcct tacgccgtgt ccttttttca tcttctgagg
      241 tata
//
LOCUS       KCHQ01000593             406 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 66871cha ultra-conserved
            element locus uce-671, sequence.
ACCESSION   KCHQ01000593
VERSION     KCHQ01000593.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66871cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-671"
BASE COUNT          112 a          114 c           86 g           94 t
ORIGIN      
        1 gcacacacac acacacacac actcctctgc gcacacacac acacgcagag ggagagagag
       61 agatgtttta cagagtgtct caccctgcag agaaaataag aaataaccat aactccttcc
      121 actgccagcc tgccctgcat gacccctgtt ttaagtgggt agcaggtaat tgctgaggcg
      181 gtgttaccca tcagcctaca agtccatgtg tgccttatgt gtcatctcta tttattatat
      241 tctgcacgct ccctgggcct tggtaatcaa tttcacaagg atacagggct gatatcagct
      301 gccgtgcaca ttatgaggcg agccctcctc ttatcaagtg cagaattgcc ggctagaggt
      361 catgaacaga taaacaggga tgtaacacaa ctcccccact cacctg
//
LOCUS       KCHQ01000594             437 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 66973cha ultra-conserved
            element locus uce-220, sequence.
ACCESSION   KCHQ01000594
VERSION     KCHQ01000594.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 437)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 437)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="66973cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>437
                     /note="ultra-conserved element locus uce-220"
BASE COUNT          132 a          106 c           79 g          120 t
ORIGIN      
        1 taaaagaatc aacttttaca caaatgcaaa aactttagta agatgtcatg caggctgtac
       61 tcacgaggga aaatatcatc cagttaagaa ctaaatgcac attaagcttt acctttaaag
      121 gcgatagcag ctatttctgt actcattatt caagtataaa atgattaaac cactactagg
      181 atgtcaggta agcctgtcag ccagcaagtt tcatttttat gattgtataa gccagagggt
      241 cagcaagctt ttcagtcgca acccatcaac ccaacccttg tgatggtatc tgcaagtttc
      301 tctggaggtg ggtcaaatct agcttaaaag tcggtcccct tcacatccaa tccaccgtca
      361 cattcttacc tacaggcaac ctctgctgag ccccggtcat taatcaaagc ggagtgctgt
      421 cctgacctca gcccctt
//
LOCUS       KCHQ01000595             373 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 67069cha ultra-conserved
            element locus uce-314, sequence.
ACCESSION   KCHQ01000595
VERSION     KCHQ01000595.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 373)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67069cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>373
                     /note="ultra-conserved element locus uce-314"
BASE COUNT          109 a           80 c           90 g           94 t
ORIGIN      
        1 ctctgcattt ataaatgcta caatgaaagc cacagcatct ggcatatgtg gttattgttt
       61 gattgttttc tactttctct cagtctctgt atgtctctct cccttttctc ttttcatccc
      121 tccatcggga gcccgtagaa gcaaaggatt atggatctct ggaaagcgtt cacccttggg
      181 tcagaagaca agacaaggcg aggtaatgaa agataaacag ctcgctgcaa acacctgtta
      241 acgtccgctt caaagaaaag acagggagga gggggggttt gcagggaggg aaaacaaaaa
      301 aagaagtatt tggctgccaa gcaacagccg aagggccccc cgggctgttg acagatcttt
      361 atgaaatgaa aaa
//
LOCUS       KCHQ01000596             547 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 67242cha ultra-conserved
            element locus uce-1237, sequence.
ACCESSION   KCHQ01000596
VERSION     KCHQ01000596.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 547)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67242cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>547
                     /note="ultra-conserved element locus uce-1237"
BASE COUNT          185 a          103 c          121 g          138 t
ORIGIN      
        1 tcaacaacta gcttgtttat ttttatcctc ttattagggg agctgaatcc ttaaagggtg
       61 ccaaaattat cctgcaaatt gctgacaggg aaaaatgaaa ggtctctaac ggttattata
      121 agcaatctgt ctgcattgaa gcacaatgtg actgctgcgc ttgcgatacc aacgaggtga
      181 cctcagtgag atggggagga gagacatgtt gaaagtcaga cacaccgtct ggatgggacc
      241 accaggaata tacacacacc cacgtttaca ccacatacac cctcaaaagg acaccgggaa
      301 tggaagtatt catataactg cttcacacag atatcctgta aacttttgtg tggtacattg
      361 tatgaatatt ttacaggtgt gcagaacatg ttaatcacta catcgtagtc tttcaacatt
      421 cagagtgaga ttgtgagatt aaaaagatag caaagaatga caagtataag atggacatat
      481 tgatggcagc ggagagaaga aaagagctga tactcatcaa gcaaacgtgc cagtcataac
      541 gtaaatg
//
LOCUS       KCHQ01000597             241 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 67278cha ultra-conserved
            element locus uce-658, sequence.
ACCESSION   KCHQ01000597
VERSION     KCHQ01000597.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 241)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 241)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67278cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>241
                     /note="ultra-conserved element locus uce-658"
BASE COUNT           51 a           49 c           75 g           66 t
ORIGIN      
        1 tactattaat attgttatta ttattattgt aacgtactga ggagacttac ataggtaggg
       61 tcttagtgac ttacacatga agggcttgac actgctgtgg atgtgcttat gctgcttgag
      121 gccagaagac gttgcgaacg tcttgccgca gtcagagcag gcgtgggccc gcgccccgac
      181 gtgctgtgag cggatgtgcc tctgcaggtt actggggtct gtgaacacct gctgggggaa
      241 g
//
LOCUS       KCHQ01000598             425 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 67352cha ultra-conserved
            element locus uce-659, sequence.
ACCESSION   KCHQ01000598
VERSION     KCHQ01000598.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 425)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67352cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>425
                     /note="ultra-conserved element locus uce-659"
BASE COUNT          130 a           65 c          149 g           81 t
ORIGIN      
        1 aagacacagc aagcatcagt aagtaggaga aacaggaggt ggttaggggg aaaacaagtg
       61 aatgaaaaga agatgtgggg gagaaagaaa aagtgagcag gaggtggtgg gattggtggg
      121 tggggagagg ggctgtagga gaaaagcgag aaagggagag agagagacag aggggtgagg
      181 gaggcaggga gacaggaaag acggccccct agcttcttcc tttatctcct tcctgcatgg
      241 tgagatgtgt gtcctagatg ccagtatcag tctctcctga tgaaacagat gtgctgtcag
      301 cttcaaacgg cacgctaacc tgtcatatca taatctaagt ggacataata cctgatatat
      361 atacactggc accatttact gctgcctgag aggagatggg tggaggaggt gggggaggtg
      421 agcag
//
LOCUS       KCHQ01000599             319 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 67482cha ultra-conserved
            element locus uce-121, sequence.
ACCESSION   KCHQ01000599
VERSION     KCHQ01000599.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 319)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 319)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67482cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>319
                     /note="ultra-conserved element locus uce-121"
BASE COUNT           88 a           72 c           57 g          102 t
ORIGIN      
        1 tccattatgg aatagtaaca caggggcctg tttgttcgcc aaacacaatt aacaaggttt
       61 ctgctgcgca tcaatactgc tatttgcata gggtattgat ctgaagtcct tataatcaca
      121 aaatgttaat tgcaccaatt aattctcaat ctgtttgtgc ccttgtctgg ccgccttgag
      181 ccctgaaggt cagtgtgaaa atgaactgct ctttgattct cctccaggaa aagatttttt
      241 ctcaagacaa cacagtttgc tactgcgaaa tcaaaaggcc ctaccatcct ttatcattat
      301 tatcattccc tgtgagtag
//
LOCUS       KCHQ01000600             799 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 67535cha ultra-conserved
            element locus uce-1329, sequence.
ACCESSION   KCHQ01000600
VERSION     KCHQ01000600.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 799)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67535cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>799
                     /note="ultra-conserved element locus uce-1329"
BASE COUNT          212 a          170 c          205 g          212 t
ORIGIN      
        1 cgggaagttt ttccagcgcg agggttgtgc tagtttgttt tagaacttga ttggattcta
       61 tatctgcaac atgcagaagt gtacagtgtg tgacatacta aagcaatatg cagagagatg
      121 attccgctct gacatcttgg agaggagtac gagtcaatta tgcccaagtg ttgttcttgc
      181 ttatcttcct gcggcaccaa acaaggattt agtcaaggat ttaggggtga gggggcggtg
      241 gtggggatca tggtaagcgg ttcacaacaa aacactcaaa actcctggga gcgggcactg
      301 atttaaaaat aaattacaga agacgaagcg ctaacactca agggccctcg gcagtgctgg
      361 cgtacacagg tgaagattag cctcctcgct aatcagagga acaaggcagt aatttgctct
      421 gaacacagac agtaattagg acttggtgac actggattcc cataatgcct ttgagcttga
      481 cgtggtcaaa ttttgacaga ggctatccat gcagggtcac tgtcccccca gtctcccggc
      541 cctcttcagt ggaggctcta aaaggtccct gcagttacag gggatcccta atgtacttta
      601 tgcctccctc actggctcct taccattcgg gtaattggaa tctcttactg tggcacttga
      661 gaatagaggc taaaaacact atttgaaact gctcagtagt ctgttgtaga taaacattgc
      721 tgcgtcgggg tgtggataca ctacataatg gagtaagagt taaggctctg gtaatacatg
      781 ccttcactga ctcctgtgg
//
LOCUS       KCHQ01000601             345 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 67604cha ultra-conserved
            element locus uce-168, sequence.
ACCESSION   KCHQ01000601
VERSION     KCHQ01000601.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 345)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 345)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67604cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>345
                     /note="ultra-conserved element locus uce-168"
BASE COUNT           90 a           68 c           76 g          111 t
ORIGIN      
        1 tggtgtgtgc ctgcgtgtgt gtctcgtcag gtctatggaa atgcaggatc tagccagtcc
       61 tcacagccga gtaagtggaa gcagtgaatc tcctaatggt cccaacctcg acaactccca
      121 catcaataac aattccatga cacccaatgg cactgaaggt atgtgtgcgg tgctgttcct
      181 ctttggttgc tttctgtctc ctgtgaatat tctaaaattt tagaagtgct cagtggtgat
      241 agaaaccata ctgtatcatt aaatgtgact tttattttga aagtaattca gtgtagctag
      301 cagtaaagct aagggttgtt gcatcgactt ttttaataat aattt
//
LOCUS       KCHQ01000602             463 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 67741cha ultra-conserved
            element locus uce-779, sequence.
ACCESSION   KCHQ01000602
VERSION     KCHQ01000602.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67741cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>463
                     /note="ultra-conserved element locus uce-779"
BASE COUNT          162 a           56 c          137 g          108 t
ORIGIN      
        1 atttctaccc aaaaaaaaaa aagaccctct cttatatttt tcccagccga caagttttta
       61 cgttatcata ctaatcgcgt ttgaacagct gcaatttgct ttggttgaac aaaggcattc
      121 taactaggtt ttaattaagt gttcctaatg accttaagga gattagaggt tcgccttcta
      181 atcaatacca ggcagagagg agcaaaggga ggggagagga ggggagggga ggtggctagg
      241 ggctaggata gaggtaggga ggaaaggggt ggagaggggg aaagagggaa ggagtgaaga
      301 ggaagcggaa ggagaagaat caaactgaat ggatggagga aggaaggaga aaaaggaaag
      361 gagaggaata aaactgtgaa cttgatattt gaatatttgc taaaaggaag taatggtctc
      421 tgttagttaa atgtcataat cacatctaca atttgaatgt gag
//
LOCUS       KCHQ01000603             294 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 67834cha ultra-conserved
            element locus uce-771, sequence.
ACCESSION   KCHQ01000603
VERSION     KCHQ01000603.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 294)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 294)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67834cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>294
                     /note="ultra-conserved element locus uce-771"
BASE COUNT           63 a           83 c           79 g           69 t
ORIGIN      
        1 tcctctcctc tcctctcctc tccagggaca gagctttcgt ccagagccat ttttcagcca
       61 atttatttct tgatgtggtc taacctgggg catctcccgc tggggaggct ttatgtggtg
      121 attaatgacg ggtatttagc ccaggtacct gggggagctg gagcccatct gcacaacact
      181 gacaggtaca acactgcact ccaggaccag acaggacagg ccaggcctgc agcagactgg
      241 agagtggcag acaggtgtga cgagtgtcac tgtgactccg ccaacctcag ttac
//
LOCUS       KCHQ01000604             542 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 67947cha ultra-conserved
            element locus uce-888, sequence.
ACCESSION   KCHQ01000604
VERSION     KCHQ01000604.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 542)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="67947cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>542
                     /note="ultra-conserved element locus uce-888"
BASE COUNT          176 a          121 c           91 g          154 t
ORIGIN      
        1 tgtaatccga catcggggat tacaccactg agtgactgga aacactgcat gtcaaatcca
       61 aatacctatt tgaaaaataa cagacaactc cagaaaagat aagaaattgc atttatctac
      121 cactttgcac ctcttgttaa tccaacaaca ttcctcaaac ccctgaagag taaaaatatc
      181 taatgtacta ccagtcacaa gagaactcat aggactaccg atctttctga taccctcaat
      241 ctgcactgag atggattaaa cattcaattt gttactcgcc agaccaccac ctaggttcac
      301 cacttaccat acaaatggaa aacacgctag taatctatta gcctgcctgg cctgacactg
      361 tattatgttg tatttgtatt atatttactt cagggaaatt acgattcaag tcatatttat
      421 cttcatgtgg aaatgtgtgt ctaaatggaa atcacctata gtgcgagtgt ggatgcagag
      481 caatactaat gtgatccatg aaccgtgcga tttagtcacc ctctatggat gcactatggg
      541 ct
//
LOCUS       KCHQ01000605             371 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 68030cha ultra-conserved
            element locus uce-513, sequence.
ACCESSION   KCHQ01000605
VERSION     KCHQ01000605.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 371)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 371)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68030cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>371
                     /note="ultra-conserved element locus uce-513"
BASE COUNT           90 a           84 c           85 g          112 t
ORIGIN      
        1 ttttgcattt tgttgaggca aatcctgctg aaggcatgtc tcggtctaca gtagcaggtc
       61 agtgggagat gtttgacatt ggccataagg aagagaagga agtgctgctc tgctttggtt
      121 caacaggcca aagacagaga acgagagagt agcagggaga cagagaaaga ggagaaaaag
      181 agcctctcct ctcatcctca ttatgtaaac gaggtgcatg actgttcagt gggtccctcg
      241 agagttaatt accagtggct tctcagccta attggctgaa actgaagaat ttgccatttc
      301 ttattcccat gctcactctt ccctaccccc tctctctctc ttattttgtc tttttctttc
      361 tttttccctc t
//
LOCUS       KCHQ01000606             402 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 68122cha ultra-conserved
            element locus uce-512, sequence.
ACCESSION   KCHQ01000606
VERSION     KCHQ01000606.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 402)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68122cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>402
                     /note="ultra-conserved element locus uce-512"
BASE COUNT           90 a          111 c           80 g          121 t
ORIGIN      
        1 cccttgggct ctctgtgcgc acaaactcaa tgccccttcc agtccaattc aattccctct
       61 ataagcatga caaatgtaca ttttgctgcc aatgaatgcg ttcatactca aaacaacaaa
      121 acagacgaaa agaacaaaat cccggcatgg ctgctaatag ttaaaattct taattcccct
      181 tcttctcctc tctctctccc cctttctctc tccccctttc tctctctctc tgtcccccct
      241 ctctcattaa tcggagttgg agaaatttga gctggggttg taggatatct ctgtctggca
      301 gagttagtgg ggattttagg gtggagggag caggtgatgg ctttctggag tgcactcatt
      361 tacactcctc cctttctctc gctgagcagc gtgaagaggt gg
//
LOCUS       KCHQ01000607             736 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 68219cha ultra-conserved
            element locus uce-511, sequence.
ACCESSION   KCHQ01000607
VERSION     KCHQ01000607.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 736)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 736)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68219cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>736
                     /note="ultra-conserved element locus uce-511"
BASE COUNT          215 a          103 c          200 g          218 t
ORIGIN      
        1 caaatgatgc tgcgagatca gctaacgcta ccaggatgct attgtacata taagtcacat
       61 atttaatgac gagtgtttgt ctttatggtg ggacaatagg agaatccatg ttagttaatg
      121 tcattcttct gaaagagaag aatcctcctg ttcctccaga gcaggaaggc ttcgtaaagt
      181 aaaaaaaaaa aaggaagggg gggtgaaatg attagtgcgc ttagtcagct gtgaaattga
      241 gtttatggtt ttcaagacgg tgaattcaat tcgataatgg gtattaagtt gtagagaata
      301 attaatagta attgacttct ttccatcact atgcaaatta aacacagata acaccacggg
      361 agctttttaa ggccagtcaa gtttgtaggg attaagttta tggaattttt gttggagaga
      421 ggagtggctc ctgttcgccg ttgattgctt tgttgacaga tttatcagtg ggtgaggggt
      481 tactgtctct gcaaggatta aaggaattgg gttgtcacaa actgtcaagg cattgagtta
      541 ggagcattct ggtctgtttg tcataatggg ctcaggctgt tctccaccat actgtcaaat
      601 acattcttat tgagctgcat ctgtaaatgg gagaagggag gggaaaatgc aaaataagga
      661 ttgaatggat agtgctgagg gggagatatc cggcgggact gtgtgcggga ggatttgtca
      721 agatgcagat ttggga
//
LOCUS       KCHQ01000608             359 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 68483cha ultra-conserved
            element locus uce-516, sequence.
ACCESSION   KCHQ01000608
VERSION     KCHQ01000608.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 359)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68483cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>359
                     /note="ultra-conserved element locus uce-516"
BASE COUNT          133 a           63 c           64 g           99 t
ORIGIN      
        1 agagcttcaa atgaacttcg atttataatc aatacatatg atggacatga accagatcct
       61 tgttgaaata agtggcatcc ttgaatattt tttgcttcaa atagtcatag ttttcctcat
      121 tattataaaa tgaaaaccaa atgtgtaaaa cacaaataaa taaataaaca aataaataat
      181 gcatctcata aggctacaat aagaaagtaa aatgatgttc cgaacctgga accacttagc
      241 gtggcgcaga gcagccagag cgtcaaggca tttttgcctg tccaagacgt ccgctgggtc
      301 tttcaccaaa ctcgaagtta catctaaaaa tggatttgaa gtgtcaaaat ggtgatgag
//
LOCUS       KCHQ01000609             649 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 68573cha ultra-conserved
            element locus uce-515, sequence.
ACCESSION   KCHQ01000609
VERSION     KCHQ01000609.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 649)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 649)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68573cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>649
                     /note="ultra-conserved element locus uce-515"
BASE COUNT          179 a          113 c          138 g          219 t
ORIGIN      
        1 tattatatgt ttttttttat tttttatatc tgtcattttc tttctatctc ccatatgact
       61 tcttaatcca tctgaatgca tagaagataa tgttttgggc gaaataacat aagaggaaag
      121 atagactccc aaggaccaat atctttattg cttggaggat aaacggatta tgtcagccat
      181 tttctgctgc tgacagcttt tcttattaac cgattttatt tttaatctgc caaggaagaa
      241 atgcggtttt atgtcacaat aaaacgctgg tcacatctaa tgctgccctc aaacaaacag
      301 atttcttaaa gccttgctgg gaaatttgaa ataactttaa agaggggttt tggggaaaag
      361 ggtggtggtg gtggtggtgg aaagggaggg ggggtcttca tccacaagct tgttcagctg
      421 aggagtaaaa gatttttaaa gtccttcaca gttgtattct tcttttaata tttatttctt
      481 tattttgctg atctccgtag aaaaaaaggc ttccatcatg actaaatggc ttgtgtgtgg
      541 gctgcctgct gcgtccattc atgcagctcg cattaggata atacaaagaa tgccacgcgt
      601 gcttcgctta caccataagt gtgtgtaaga cggcagctgc aaagcttca
//
LOCUS       KCHQ01000610             424 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 68614cha ultra-conserved
            element locus uce-1217, sequence.
ACCESSION   KCHQ01000610
VERSION     KCHQ01000610.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 424)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 424)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68614cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>424
                     /note="ultra-conserved element locus uce-1217"
BASE COUNT          112 a          101 c           96 g          115 t
ORIGIN      
        1 ataacttctt gttgacatgc agcagcactt ctttttctat cgaagcagca gaagtgcggt
       61 aaaacaaaac aaatcaatga aagtactctg cttcatccag acgacctgcc gtaccaaaat
      121 aacgtttctg tttttttttt ctttcttgct gccctgagtg agtgaaggcc acaagctctg
      181 tcatgtagtg tatatgctaa ctcaaaagga aggacaggtc ctagcgattc ggtcgcttgg
      241 gttgatgtga ccaggacatg gccatggcag cagtgaaagc ccggttgagc catagtgaca
      301 cgtcgtctcc atccatcttc agtctgaaac attttacgct aactgacaga gcgtggcgct
      361 tgcttaccca cctcccagag gaaatagtcc agactggtgt cttcttgaca tgcactaaag
      421 agtg
//
LOCUS       KCHQ01000611             390 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 68681cha ultra-conserved
            element locus uce-452, sequence.
ACCESSION   KCHQ01000611
VERSION     KCHQ01000611.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68681cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-452"
BASE COUNT          110 a           62 c           86 g          132 t
ORIGIN      
        1 taatagtaaa atgagcctct ttgtttggag tttttggcca tttgaaatca gttgttaggg
       61 gaatagatca atagactcat tacaattgtg ttgtaatgac tgtctatcaa acttcaggca
      121 tacctccagc aagctcaaga gctggtgata cttgaatcca tagtgctgca gaccctgggt
      181 aagtagtggc gactggaatg gatgacttga gagagagata gcgttctgtt tatcataatc
      241 attatctttg ccttatcatt atcactaagg gagtaatgct attgatcact gttgaattta
      301 ttcatcacag cctgttgagt gaaatattgt tcagctgctg tatgggtatc ttgtcatgag
      361 catattttct ataaatcatg taaaggtgac
//
LOCUS       KCHQ01000612             298 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 68776cha ultra-conserved
            element locus uce-453, sequence.
ACCESSION   KCHQ01000612
VERSION     KCHQ01000612.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 298)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 298)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68776cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>298
                     /note="ultra-conserved element locus uce-453"
BASE COUNT           67 a           74 c           88 g           69 t
ORIGIN      
        1 ggactctctg ctcccatgga cgtttgtgga cgttatccag gtgagtctca cctcggcagg
       61 tttggtcgct ggcgctgctg catgggaagg ccatttcatg cctggctaaa catgctttgt
      121 ggtccgggtc ccctaatctg gaaacaatta ctgtaggatt acccgccagc gcagcccagc
      181 gcctgcacag atttaataaa agtgtgcaca taggctgagg gcgtggctcc cccagtgtga
      241 cacaacagaa gcggcatctt cagagaatgc gtatggagag taagcaagtg attgggag
//
LOCUS       KCHQ01000613             432 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 68873cha ultra-conserved
            element locus uce-450, sequence.
ACCESSION   KCHQ01000613
VERSION     KCHQ01000613.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 432)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68873cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>432
                     /note="ultra-conserved element locus uce-450"
BASE COUNT           92 a          103 c          101 g          136 t
ORIGIN      
        1 gtaacagatc tgaatactta ttatttatta ttgcataatt tcccttcagt atctcttgtg
       61 caacattgaa aagacaggaa tgtctctgtc atttatttat tctcttctgg taatagctct
      121 gctaaggggc atccatatgg agagattgcc cacggatgtg tgtgctgtga tgccagtagg
      181 tggtcctgcc catggcttgg tgggtgagca tggtgtagtc cctgctgcca ctgccgctga
      241 catatcagag ctgtttatta agaggatgac aactctatca agccccataa gcgggccctc
      301 gtgcacagga gttcttttgt tactttcagg gagggtgtca tcaatcttgc tgccatgcta
      361 ctctcttgag ctgttgatgg caaacacgat tcctcccttt ctgcctggcc tctcccgcct
      421 cacagtctgg aa
//
LOCUS       KCHQ01000614             380 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 68970cha ultra-conserved
            element locus uce-518, sequence.
ACCESSION   KCHQ01000614
VERSION     KCHQ01000614.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 380)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="68970cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>380
                     /note="ultra-conserved element locus uce-518"
BASE COUNT          107 a           84 c           79 g          110 t
ORIGIN      
        1 cctcctgcca acagcgtgtg atttgtaaag atttggtaat atcttcagtg atttaatcaa
       61 aacaagcgat ttcatgctgc aatacaagga aacaattgtc tccagcgatg atgggtgtct
      121 ccaaaatatg taataaatat gccagttgtg cgttgacttt ctaatagagg gcaagagtgt
      181 gtgtgttttc tgctgggatg actcttggtt ctctcttgtc tttagatacc agcctgttga
      241 tatcattcaa ccaaccaatc atgtattgcc agcctcattc ggggattctg attggcacat
      301 tgtcacaggc aactctctta ccaccaccaa tgagtcccca cgtagaaaac cctcacagca
      361 tgagctggag aaacagagaa
//
LOCUS       KCHQ01000615             303 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 69139cha ultra-conserved
            element locus uce-457, sequence.
ACCESSION   KCHQ01000615
VERSION     KCHQ01000615.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 303)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 303)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69139cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>303
                     /note="ultra-conserved element locus uce-457"
BASE COUNT           72 a           72 c           78 g           81 t
ORIGIN      
        1 gtcaggagtc tctcctgctc accatattga aagtgtgtta ctgcgtgttt gagagagcgt
       61 cggtgcgtct gctgtgagtg tgtgcgaggt aagaagtgtc aaggaattca ttgtctgttc
      121 tccacctgtt attattctgg tcccaatcaa cctgctagcc agtctggagc cagtggccat
      181 ctggaaacac tgctctgttt ataaacttgg caaggatcag cactccgggg ctctgacctc
      241 ccacacaaat ctggaaacaa ttagagcaag acagtctggc tgattactgt gaaagagccc
      301 agc
//
LOCUS       KCHQ01000616             443 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 69217cha ultra-conserved
            element locus uce-454, sequence.
ACCESSION   KCHQ01000616
VERSION     KCHQ01000616.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 443)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69217cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>443
                     /note="ultra-conserved element locus uce-454"
BASE COUNT          116 a           83 c          108 g          136 t
ORIGIN      
        1 cctccagctc ttcagctaaa ccaatcccaa ctgagtcggg acgggcctct gtagattttt
       61 ggacatacag cgaacaaatg tggacatgaa agggggaaga ggagggctgt tctggaggta
      121 aagatttgtt aaccctcttg aacttgacaa gagacgggac tgaggcacag attagccctc
      181 tcaaagctgg cttttgcaaa aggttgctgt gtgaatatct gaatgttggt gtgaagtggt
      241 gtgtgagtgt gcgcatatgt ttgtgtgttt gtatgcgctt gtgctttggt gttcaaacaa
      301 gtttgcctgt ttgcacattc tatatgcaga cacatacaat cgtcatgaca gccgcacatt
      361 aaatggtacg taattacagc aatgaaacca tttaattatg ttgtaattac attttacatc
      421 tctgccatta tcgtatctgt tct
//
LOCUS       KCHQ01000617             222 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 69394cha ultra-conserved
            element locus uce-306, sequence.
ACCESSION   KCHQ01000617
VERSION     KCHQ01000617.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 222)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 222)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69394cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>222
                     /note="ultra-conserved element locus uce-306"
BASE COUNT           63 a           56 c           49 g           54 t
ORIGIN      
        1 aaatgcaagg gcatttagct cgacttgttc tgcaagaggg acttacttga catttatgtt
       61 ggcacagatg agtacattat caaagaggaa gacctttctc tccttcgact tcaggacttg
      121 tccccgctcg ccatacacag tctcaataag cgtctcacaa aggaccagtg acccctgctc
      181 caagttcagt tgctaaaagg gacacagcaa tcagatcagg gg
//
LOCUS       KCHQ01000618             288 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 69487cha ultra-conserved
            element locus uce-307, sequence.
ACCESSION   KCHQ01000618
VERSION     KCHQ01000618.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 288)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 288)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69487cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>288
                     /note="ultra-conserved element locus uce-307"
BASE COUNT          103 a           52 c           62 g           71 t
ORIGIN      
        1 gaattttctt ggagtaagga caaaaagatc ctcggcaaac agaaaaaaaa tacaaaaaaa
       61 gggggggaaa gggataaaac gggttggggg tggaaggaga aaaacgcatg aaacatgaaa
      121 ctctgcaaat ttgacttata acaagcaaaa ttacaccctg ctgtcattta aattatggct
      181 gccctctata aaggtgtctt ttaggtgcat taattgaatt cggcactatt tcccaataat
      241 aatctgtaaa gttcagccgt ccatccttca tgagatccct gccgcgta
//
LOCUS       KCHQ01000619             491 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 69574cha ultra-conserved
            element locus uce-304, sequence.
ACCESSION   KCHQ01000619
VERSION     KCHQ01000619.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 491)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69574cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>491
                     /note="ultra-conserved element locus uce-304"
BASE COUNT           57 a          169 c           98 g          167 t
ORIGIN      
        1 cctctatctc tctctatctc agttctctgc tcactgctcc tctccctcct cctgctaggg
       61 ttgcttgtct tagtggatgc ctgtctgtca gtctgtctgt cctgtcgtcc gtctgtcttg
      121 tcttgtctgt ctgtctgtct gtctgtagtg ttgtggttgc cgggacagat gcactgatgc
      181 ctgtgattcg atgctttatc tccactagct ccagtgtagg ttggaggggc ttaaagatga
      241 tcgcaggagg accttcagct ctcgagtaac tatcccgccc ccaccctttg cctttccctc
      301 accctcctcc gaggagcgcg caaaacaaac gccccgctct gtaccccccc cctccccccc
      361 gcttgcctag ctttctctct agctctggct cactctcttt ctctgttacg tctctctatc
      421 tgtctgttgc caccggtcct ctttctcgtc tgtcgttcac tctcgtcact ctgtctcact
      481 atttctctgt g
//
LOCUS       KCHQ01000620             446 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 69663cha ultra-conserved
            element locus uce-305, sequence.
ACCESSION   KCHQ01000620
VERSION     KCHQ01000620.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 446)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 446)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69663cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>446
                     /note="ultra-conserved element locus uce-305"
BASE COUNT          149 a           83 c           72 g          142 t
ORIGIN      
        1 tttctcaaag taaacaacag tataattcaa aagtcaatta gcctccaaca acactgcagt
       61 ctgcaaagtg acccaaagaa caaaaacaat catgagatgc ttggtttcat aataaagttt
      121 attctatatt acaaatagta ttttgttctt gactgcaaaa taggaatgca ttatatttac
      181 atacacaggt atacaattaa ttataacaaa gttagagaag ctcgccttat atcccccagg
      241 tttcgttttt atctctcgat aagatactct ttatctttca aatatggtct agtaaaagtc
      301 ttttctagca tgtttctgta acacctgcta taacactgag ctaggaggac atttttagtt
      361 cctacaaaac gtttaaaggt ggaaacttta tctgtgctct tggcaacaca agggtggcta
      421 ctagcagaca acctttgttg cagggg
//
LOCUS       KCHQ01000621             372 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 69758cha ultra-conserved
            element locus uce-302, sequence.
ACCESSION   KCHQ01000621
VERSION     KCHQ01000621.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 372)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 372)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69758cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>372
                     /note="ultra-conserved element locus uce-302"
BASE COUNT          107 a           64 c           94 g          107 t
ORIGIN      
        1 aaatagatta agggagggat ttttttcata tggagcatta caagggatcc acattgtcct
       61 agttaagagc tatgcagagc aggctgatag ataatggtca cctcgaggct gcctaataaa
      121 gcatgttaaa gggcttagga acacgacatt actgagtgta gtttttacaa tgcaagatgt
      181 attggcttaa tatagttact cactgatgct tacctgacta aatgcccctc acacacaatc
      241 aaggctggct gtaatcagtt atgtcgagga ggacgaacgt gttttcgagg atgcctttga
      301 agtgtttcgg gagttttttt gtaaatagcg aggacatcag tcacgctgag atgtgtgtgc
      361 gcttaaacac gg
//
LOCUS       KCHQ01000622             282 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 69952cha ultra-conserved
            element locus uce-301, sequence.
ACCESSION   KCHQ01000622
VERSION     KCHQ01000622.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 282)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="69952cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>282
                     /note="ultra-conserved element locus uce-301"
BASE COUNT           68 a           74 c           49 g           91 t
ORIGIN      
        1 tccccacgtt taacatgcca gtgagcaaat cccacaaaca tcagagatct gggatggcga
       61 gtccttcctt ataaattcta taaatgtctg gtctcttttc atggattact gtcatttgcc
      121 atccgctatt gtgagcgcct gccaggctgg cttgccattt ctgggcctgt gtttccaacc
      181 ttgatatatt tgccaaatga atatttgaag ctgtaattaa atttatccca cctctacacc
      241 ttctgtaaga cggccacctt gcacatttct cacatgccat at
//
LOCUS       KCHQ01000623             577 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 70046cha ultra-conserved
            element locus uce-265, sequence.
ACCESSION   KCHQ01000623
VERSION     KCHQ01000623.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70046cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-265"
BASE COUNT          154 a          116 c          115 g          192 t
ORIGIN      
        1 ggagtcaaca gatgagaaaa atgtctgtat tttacacaag ttatgttaat tttactgtgc
       61 agattatgat ccttggaagg agaggagaaa aaatgaattg gcagagtgtc tttcaagtgg
      121 acaaagtgat gaaaatcccc cctactttgt tgggattgca gttgtaagct ttgcaccata
      181 tgctactttc ctctttagct gggattatgc catcattatt gctgataaaa gctgtttact
      241 gccttggctc caaatcgatg ctcggggcgc tctgaaactg gcattccctc tccagaagag
      301 ttcattccat gccagctgct caggattcaa ccccctttgt ttaagatttc acagtttttg
      361 taatgtttat tttctattta gtttctaccc cccttccctc acacatgagc tttttcctgc
      421 attagcatat gtttgcaaca atttgacatt cacatttgat ttgcttacag cagattggag
      481 gtgtctcaga catgcttata caatactctt ggagctacag tgctagttaa cgctgcagag
      541 actagaaaat acaaatatta aggcctgttt tgagatg
//
LOCUS       KCHQ01000624             240 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 70419cha ultra-conserved
            element locus uce-51, sequence.
ACCESSION   KCHQ01000624
VERSION     KCHQ01000624.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 240)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 240)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70419cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>240
                     /note="ultra-conserved element locus uce-51"
BASE COUNT           57 a           62 c           79 g           42 t
ORIGIN      
        1 ccgcaagctg ccctggcagg accccgaggt caagagctac ctgatctgct gcatggtcaa
       61 catctggaac gtcaagtaca acagcatcca ctgcgtggcc agcctgctgg ccggcctggt
      121 catctaccag gaggacgtgg gcatccatgt ggtggacggg gtgctggagg acatccggct
      181 gggcatggag gtgaggacag aaacatgcat ggaaatctga gctgatgcag gatacaaagt
//
LOCUS       KCHQ01000625             229 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 70597cha ultra-conserved
            element locus uce-262, sequence.
ACCESSION   KCHQ01000625
VERSION     KCHQ01000625.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 229)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 229)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70597cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>229
                     /note="ultra-conserved element locus uce-262"
BASE COUNT           58 a           47 c           64 g           60 t
ORIGIN      
        1 gttttttatg tggtgagggg aagagcctgc gcggttgagt gttgtaaaaa ctcagctttg
       61 ccttcatcag gcaaggccaa atcacacgag gcgagggagc taagtgattg ttagtaggca
      121 agccgcgtga gcctttgatc tctcctaaat aaaagggaaa gcctcacgtc gcgcagtgct
      181 gatttcagta ccgtaacgtc acctctttga tgcatggaaa tattgtgac
//
LOCUS       KCHQ01000626             466 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 70670cha ultra-conserved
            element locus uce-1131, sequence.
ACCESSION   KCHQ01000626
VERSION     KCHQ01000626.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 466)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70670cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>466
                     /note="ultra-conserved element locus uce-1131"
BASE COUNT          133 a           94 c           88 g          151 t
ORIGIN      
        1 caacaaaaca ttgtctcttt ttgattcagg catgatttca aatgaaagct attgtttgta
       61 ttctacagag tctcgtgact ttatcttcct gcacaaaatt agattctcag acctctgcaa
      121 acaaaattgc attgttttgt tccctgttca atagatatga tccattttct gtgtcagaga
      181 atgtgttaag ggagcggagt aaatatgctc acaattttca gtgtgtagaa atttgcattg
      241 aggggaaatt atgcatgctg gctagtggaa atgaaatgta taaagtgcat gactggtaga
      301 cttgacaagt gcagctttca tccatctcaa atgaataatt ttcacttccc ttaaacatcc
      361 ttaatccaac catgttatca gcgggcatgc aggattctgc cagactttct ccttaacggc
      421 acagcaactt tcaactcgcc tgagatgctg cactgcagtt gcttac
//
LOCUS       KCHQ01000627             618 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 70759cha ultra-conserved
            element locus uce-1004, sequence.
ACCESSION   KCHQ01000627
VERSION     KCHQ01000627.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 618)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70759cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>618
                     /note="ultra-conserved element locus uce-1004"
BASE COUNT          172 a          124 c          152 g          170 t
ORIGIN      
        1 taataacctg aatagcatta ttttttcacc tctagccttt aaaataatgc atgcttggct
       61 tggtgtctgg atgaagtttg cctgcatatt tgcctggtta tcggtgtgta caagacctgc
      121 tgtgtgacct ggtttcatgc aatctccatc ttctaattag gaggctgcag aaaggctgga
      181 acgagaggag gagtgattag ttgcctttgg gtatttcata agtggctttc agtgccacat
      241 ttgcattatt tgcttggggt ctgaataaca aatcagccta cctttgcacc aaattgaggc
      301 tagcagctag accatcaata catgaaatac aaaatgaaag tgaagaaaag aaataagcaa
      361 aacgcgctaa cacaatatag gaggatgaaa tgaaatattg aaacacagga cacaataaga
      421 tggtgtaaac cgggagtcga ctgacagtgc agatattcag acgttcttcg actcttcgag
      481 tgtgttttcc ttgatgttgg tctccataat aacacacgag cgtgtccgtg atggcggctc
      541 attctgcgac cagcggacca tgtgaaccgt gcgagcccga cgtcgcagcc ccatgctgta
      601 tgtgctgtgt ggggtcag
//
LOCUS       KCHQ01000628             311 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 70881cha ultra-conserved
            element locus uce-57, sequence.
ACCESSION   KCHQ01000628
VERSION     KCHQ01000628.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 311)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 311)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70881cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>311
                     /note="ultra-conserved element locus uce-57"
BASE COUNT           80 a           66 c           68 g           97 t
ORIGIN      
        1 aacataatta ttccaggctg atggtggcgt atagtggtca caggccagtg aaatctgtga
       61 gtcataggat atgctgttac ttttccctgg taatgggaaa catgactcct ctctctcgtt
      121 tgctgttgtg attgaaggca ctgacctgtc atacatttat aataggggag caggtgtggc
      181 agtgatggac cttaatttcc tttaataaac cttttatgtg ccacactctt aatgccacac
      241 cgggccctca gaggtcctgc tcataatagg ttcattactt ttgattacta cagcctattg
      301 agacaaacaa c
//
LOCUS       KCHQ01000629             231 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 70979cha ultra-conserved
            element locus uce-630, sequence.
ACCESSION   KCHQ01000629
VERSION     KCHQ01000629.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 231)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 231)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="70979cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>231
                     /note="ultra-conserved element locus uce-630"
BASE COUNT           56 a           49 c           47 g           79 t
ORIGIN      
        1 catcctcttc tcgcttctct acccctctaa tcctcccatc ctgtttttgc ctgaatttca
       61 tctgcgatgc agacacatct ttatctctgt ctcaaacaca tgtttactct tgattataaa
      121 gagacaactg tgaatccttt aagtgacaaa gttgtgagcg gggcatgtgt ttgcttgaaa
      181 atatttgtgc atgtgttgaa gtgtgtgatt gtgacgaaaa caggatggga g
//
LOCUS       KCHQ01000630             237 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 71071cha ultra-conserved
            element locus uce-1224, sequence.
ACCESSION   KCHQ01000630
VERSION     KCHQ01000630.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 237)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 237)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71071cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>237
                     /note="ultra-conserved element locus uce-1224"
BASE COUNT           52 a           47 c           71 g           67 t
ORIGIN      
        1 agaaattaca ggcttgtctt tgacttgtgt ggcgtgaacc agagatgcat cccacagccc
       61 ttgtgtcctt cacaagcctt tattatttat aacgctcgct ctttgagcaa tgaccagtac
      121 taatgcataa ccttctgtcc ttctggctga ttcgcttcct ttgaaaccaa agattgaggc
      181 aggagaagtg ggtgtatggt ggatgaggca ggggtgtggg cgggtggagt ggggggg
//
LOCUS       KCHQ01000631             229 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 71341cha ultra-conserved
            element locus uce-1267, sequence.
ACCESSION   KCHQ01000631
VERSION     KCHQ01000631.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 229)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 229)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71341cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>229
                     /note="ultra-conserved element locus uce-1267"
BASE COUNT           98 a           44 c           43 g           44 t
ORIGIN      
        1 tgcactaaga aaagccgtgt ggaacacaat ccgaaaaaaa acacaaccaa atcatacatt
       61 tcgagaaaaa caaagaccaa agcaacacaa acgctcgttg taagtatacg ctttagtcca
      121 atgtgctgta tacctagaaa caagccacgt taataaatgg aatgctcaca gaaaaaatta
      181 aaggagaata tcacatgcaa gtttgaagaa atctggtgga cgaggtcag
//
LOCUS       KCHQ01000632             257 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 71432cha ultra-conserved
            element locus uce-1266, sequence.
ACCESSION   KCHQ01000632
VERSION     KCHQ01000632.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 257)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 257)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71432cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>257
                     /note="ultra-conserved element locus uce-1266"
BASE COUNT           59 a           48 c           58 g           92 t
ORIGIN      
        1 tcaggaaatg tagatgggtt tttaaggtct gaaagccaca gctgcttggc aagcagaagc
       61 tggctccttt tgtcttttat cttcttctgt aatgtgcaca ggtgctgctt aattcaattg
      121 gagaacgttg ccatggtttt acattaatat atttccatgt taccattacg actgttgtca
      181 tggagatgat aggacctatt tgaactgaaa gcagagatgg ttttatgggg gtattgctct
      241 ctctctctct ctctctc
//
LOCUS       KCHQ01000633             579 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 71514cha ultra-conserved
            element locus uce-1261, sequence.
ACCESSION   KCHQ01000633
VERSION     KCHQ01000633.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 579)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71514cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>579
                     /note="ultra-conserved element locus uce-1261"
BASE COUNT          162 a          145 c           99 g          173 t
ORIGIN      
        1 ctttaaagta tagatagacg tatagcatgt ttgaacaaag ccttaaacct aaataagatg
       61 acaacacagc ggatcgaaga gtcctccctc gtctcctccc accctctccc gcctctccgc
      121 cgtggatgct gatgcttgag tcaaattgat tacaccactc catctgcatc atgactggcc
      181 tcctcctgtg tttgccgcct ctgcctacag cacagagtta gtgtacaatt acatatagtt
      241 taatatatct gcctgagcac ctttaaataa gcatcacaag tccacaaggt gatttgtctt
      301 ccagccccat tactccattg tacatcttga tagccaggga tcgctcctag ctatgtttaa
      361 gcattaaata gtgtattatt atttcacata aatcaagctg agatgtgagg ggggtattca
      421 taaattttgc atttctcaca gacagtattt taaagcctct ctctctctcc ctctccctcc
      481 gctgctctga attttgagac taaagcaatt gtgctccctg cacttgatag tacattaaag
      541 ataggcatat cagggagata tattcaaaac aacatgtaa
//
LOCUS       KCHQ01000634             614 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 71608cha ultra-conserved
            element locus uce-1260, sequence.
ACCESSION   KCHQ01000634
VERSION     KCHQ01000634.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 614)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71608cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>614
                     /note="ultra-conserved element locus uce-1260"
BASE COUNT          165 a          146 c          163 g          140 t
ORIGIN      
        1 tttaggaaag tcaagtaacc tgtgaaacat agaaaatgcc ccacagctta aaatcctaca
       61 acaaaaagaa gaaggtatct aaagtccctc tcaaaatctc caacattgtt gcaatccacc
      121 ctgctatttc agctagagcg aagagcattc tagcaaggca tcatcatcag gcactcccat
      181 gtcatgtaaa tgctctatgc tttaatactc atatggagaa gggttacgat agagtagtgg
      241 cagtgagtac atctctcttg caggacgtcc ccactccgac agatcaggtg cccttcctcg
      301 tcgtccctca cactcagtgc ccgcgtccgg ctgttgctcc gctgttttcg cacccaaacc
      361 accatcagca ggtcacgaca cgaccggagg gacagggggg tttcagggac agccgcagcc
      421 atggtgtcag gcggcacagg tagacgagga gggaggagga gggtggtgtt ggtggtagtt
      481 gatgtagttg tggttgtagg tgggtttggt ggtcatgggg cgattcacgc atgacaccac
      541 gtgaaggaaa tatataacga tagggatata gtgcaaggga acaagtcaaa gatcacatgt
      601 tgtcctctgc tccc
//
LOCUS       KCHQ01000635             612 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 71708cha ultra-conserved
            element locus uce-1263, sequence.
ACCESSION   KCHQ01000635
VERSION     KCHQ01000635.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 612)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71708cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>612
                     /note="ultra-conserved element locus uce-1263"
BASE COUNT          198 a          122 c          114 g          178 t
ORIGIN      
        1 gattagaggg tgagttttaa tgacaactaa ttagccagcc tctttagcct tggcataatg
       61 atcaaacgag ctgtcatcgg gtacctgata caatgatcct ctcactcttg atatgatatt
      121 ttattcctct gcaattatgc agcccccact gcaccacatg tgtttattgc ctcaagcaca
      181 catgtcaaat taaagagcag cttatgcacc tgatattcaa ttattgcctg ctgcaccacc
      241 atgcacaatg ggaaaatgtc aaagccagca atctacagta cttcaagcag caatcggtac
      301 gatgcgatct ccgagcactc atgcatatac acagacacac agataggaat ttgaatgttg
      361 aatatgaatg ggaatatttt ctagcttgcc tatgctcagt tgacttttta ggcttccctt
      421 tgtcagtgta aagggaattt ggcagatgac agtattgctt gccagcaaga agagcttaaa
      481 gctgatgttt gcttacaatc tgaaaagaaa aaaaaaatct tgaaatatat tgtaaaaaaa
      541 aaaaagataa ttattacatg agattcagcg aagtaaatgc atttatttgg cacagctgct
      601 acattttcac tg
//
LOCUS       KCHQ01000636             513 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 71805cha ultra-conserved
            element locus uce-6, sequence.
ACCESSION   KCHQ01000636
VERSION     KCHQ01000636.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71805cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-6"
BASE COUNT          168 a           96 c          116 g          133 t
ORIGIN      
        1 accgatgatt tttatatgaa gaagtcaaat atagataaaa ggtttcacca ggacgggaat
       61 gttgcctttt tcctgctgca gtatcatagc agagctgtaa caatagtctc ttctaatgac
      121 attcccctag taacttcttg cctctacgaa tctcaggggg gaagcgctac aaaaagtgat
      181 aattacatga aatatacata gagaataaag ggagcatgtt tacataacca ggcccataaa
      241 tatctgacgg agaagacatt gttctccgac tccttttaag ctgatctccc agggatgcca
      301 ttttaatgac atgatggttt aaagagatgc tgctccatct cgttccatat ttaattaact
      361 tttgcttttc tgacgcagag gaaaaacaga ataaagaacg cgtgatagag acaaacacgc
      421 acgatagcga ggagacaata acaaatagct gggagaacag agagggaggc agggggaaca
      481 tgagctgaga ccttgtcatg cttttgtgag ctg
//
LOCUS       KCHQ01000637             421 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 71903cha ultra-conserved
            element locus uce-636, sequence.
ACCESSION   KCHQ01000637
VERSION     KCHQ01000637.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 421)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 421)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="71903cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>421
                     /note="ultra-conserved element locus uce-636"
BASE COUNT          109 a           91 c           81 g          140 t
ORIGIN      
        1 ctctgctgaa gcccaatact gttcttcatc ttgtgttgtc acaacccccc tgctaccttg
       61 attcactctt ggtcgttggc taggttttgg atttattact ttcgaggccg aacaatcagt
      121 ggaccaggct gtcaacatgc attttcacga catcatgggc aaaaaagtgt gtagttgtag
      181 ttttatttta cccttaagat caaacagagg cttgggcgac ggagtgagaa ttaaactatg
      241 atgctgtcaa attagtcaga gctcattttc cattggcttc ccattagtac ctgtagcatc
      301 atatagcaca aaggtagcct ttaacatctt aaagtgacca ctaaatgaat ttactcatct
      361 tattatttgc tctaagcatt accgttactc ttattgttat ggcttatagc ttccagaggc
      421 g
//
LOCUS       KCHQ01000638             256 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 72002cha ultra-conserved
            element locus uce-1287, sequence.
ACCESSION   KCHQ01000638
VERSION     KCHQ01000638.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 256)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 256)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72002cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>256
                     /note="ultra-conserved element locus uce-1287"
BASE COUNT           94 a           58 c           50 g           54 t
ORIGIN      
        1 taacaaagag cagacagggg gaaaaaatat ttaaaacccg aatagcgata cataaattaa
       61 ttaaaggaca aaaaaacaag tggagaatta aagttggaac atctgtcagc gacttagctt
      121 cccaacgtaa taccagtgtt agaacattta tacccttgaa gttaatgatc ccctctttaa
      181 ttgacagtca aggaaaagtg gctgcggcag catcctgccg agacgccgat aagaggcccc
      241 cttcccccct cccaaa
//
LOCUS       KCHQ01000639             796 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 72102cha ultra-conserved
            element locus uce-365, sequence.
ACCESSION   KCHQ01000639
VERSION     KCHQ01000639.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 796)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 796)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72102cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>796
                     /note="ultra-conserved element locus uce-365"
BASE COUNT          246 a          153 c          190 g          207 t
ORIGIN      
        1 atgacagtcg actcagctgg agaagcgtga taactaagaa cgttgctaac atatatgaat
       61 tagaaagttt tattttttct caagtcttca gtcctcttgc tgcttccagt cacactctat
      121 attaacattg gtccttaatt gcaaagtctc ttgtgtatgt gggttttttt ttgtattttt
      181 cttcatcatg ggacatgatc atccagtgtt tagtgcttct aagaaaaata gctggtcctt
      241 cagaagagtc tgtgtatctc tatttcttaa atggagctaa tctactaaaa ttctgccaga
      301 aaggagcctg gcctcttttg gattgactga attcaaaaac ctctccttgt gccatgtcct
      361 ccgttacctc atactgcccc gcactgaggg ggtcctgggg gggcgggtat gaggggggcg
      421 tgcacctgtt tacacctaag aaggcaggtg caaaaagagc aggaaggggg tgtaagaggg
      481 agggggacaa ggaggcggtg cagggcacaa agcgaaagag aaaaagaagg gaggtggata
      541 gcaaacagga aacattgtca gtaatctatc tgaaactgac acaacaacac aacatcaagt
      601 catgcttcca aagaaaacag gcacacagac atacaaaatg agccttcagt gctaacattc
      661 ctgcatatta aacctgagat atgatacagt atgatcatat gatgacggct gaattgggag
      721 aaatgtggaa ttcagctgca gcaatgacac aagggagact aaagatgcta ttcaatcaaa
      781 ctctgtaaca ggcaaa
//
LOCUS       KCHQ01000640             506 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 72160cha ultra-conserved
            element locus uce-480, sequence.
ACCESSION   KCHQ01000640
VERSION     KCHQ01000640.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 506)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72160cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>506
                     /note="ultra-conserved element locus uce-480"
BASE COUNT          159 a          111 c          126 g          110 t
ORIGIN      
        1 aatgacctta ttccacattc cacatgctga catttccatg caattcaatt gccatctttg
       61 ccgagaagga ggacgacagg ggataaaaga ggaagagcat tggttaaaaa caacttattt
      121 aaaaactact acacacacaa aaaaaaatgt aattccaccg agacaggcac tgtgactgac
      181 acctgtcagg gggatgataa atgactccat tttctgcctg tgctgccttc tgccactggc
      241 ggcagcggcc atttatcatc atccgctgtc agccgtggaa agcagcagtg acagtgcgag
      301 tcagcaaaca tttagcacac gcagccgcac tacacgggga aattattatt gtcagaataa
      361 taatggttta gcataattta ttacaggtcc accaaataag caggggctag gtgttattag
      421 acagatggat gggaaggctt ggcagacatc cactgaggct caggcaggca agggccctca
      481 acgagaacat gaggaggagg aggggg
//
LOCUS       KCHQ01000641             210 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 72225cha ultra-conserved
            element locus uce-4, sequence.
ACCESSION   KCHQ01000641
VERSION     KCHQ01000641.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 210)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 210)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72225cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>210
                     /note="ultra-conserved element locus uce-4"
BASE COUNT           70 a           45 c           45 g           50 t
ORIGIN      
        1 ggctgctcgc aagtaggagg gctttatgga gcagaaaaac gacaaagcta gaaaaattat
       61 tttccactcc agaaattaat gatcatgagc tcgtatttga tggagtctaa ctacattgat
      121 ccgaaatttc ctccatgcga ggaatattcg caaaataact acatccctga gcatagtcca
      181 gaatattaca gccgcgcaag ggacactggc
//
LOCUS       KCHQ01000642             746 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 72313cha ultra-conserved
            element locus uce-1137, sequence.
ACCESSION   KCHQ01000642
VERSION     KCHQ01000642.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72313cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-1137"
BASE COUNT          231 a          147 c          179 g          189 t
ORIGIN      
        1 gttttgtgtg gattaaacaa acaacgtgtt aattagtgag cattacagtt ggaggtatgt
       61 aggaagccct tttcgcctta ttttcaggct ttgtgctaag ctaagctgac cagctaatgc
      121 ctcgagtatt tcccaaatgc taaactgttc atttcacagt cttttacaga atgtctgcag
      181 gaaacattgc atgcaatcag gttcaagcaa tgtccttcaa acctttcctg tgcaagaacc
      241 aacatttcaa acaggcgacg cacacatcac acattaaagc acacaaaata aaagaagatt
      301 taagcaatga cagggtggca tgtcaggggt cggagacaaa tagttggaag cacaggtgaa
      361 agtatggctg gttgtggatt ctcttacatg ggtcaacgtg gtgcccgggg gcagagttta
      421 agagcatcat ggcagtggca gcatcaatgt cagactctgg aagaggagag aacatgcatg
      481 atggtcagtc ctaaggtgtg aaagcatggt agcagggcat ctctactagg actgggaaga
      541 cgggaccctt tcagtaatct taaacaagaa acatagtgat ccaatcaatg cttagtgaag
      601 ggatcgaata tgcagggttc accgaaacaa agcagaggat aaattccagc cactgctatt
      661 gagagtgcat ccgatctttt cagacctgac aaagtgtcta aaagcctcat agctcacttc
      721 tggggctcta aattattaat gattac
//
LOCUS       KCHQ01000643             415 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 72402cha ultra-conserved
            element locus uce-315, sequence.
ACCESSION   KCHQ01000643
VERSION     KCHQ01000643.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 415)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72402cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>415
                     /note="ultra-conserved element locus uce-315"
BASE COUNT          115 a          114 c          106 g           80 t
ORIGIN      
        1 tacccagctg gagcgaacat tttgttgcca tgacaaagcg caggccaaag ggctagctgt
       61 caacaaaaga gaggctaaag aggagaaaaa agagctgatt tcaaacagcc cagatcaaaa
      121 aatttgtcat aacaacaaag ctttggtcta aaccaacacg ctggggcccc tgtagacttg
      181 gagatttgac aaagcccagc cctcattttt ggaggcccag ctgtaaaaaa tgccatttaa
      241 tgaacctgtc tgctgaagct gtcccctgcc tgtcagaggt gtcagccagt gacaagcgct
      301 ggggaccgcc gcctccagtc acagacaggc ctgccagctg gagacttcgg ccccaatcta
      361 atcacgccac caggaaggga ccggcgctct gctcttggtc tgtcacgctc ggggc
//
LOCUS       KCHQ01000644             427 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 72497cha ultra-conserved
            element locus uce-1046, sequence.
ACCESSION   KCHQ01000644
VERSION     KCHQ01000644.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72497cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-1046"
BASE COUNT           97 a          107 c           88 g          135 t
ORIGIN      
        1 gcttgactta atccagtgct ctttgcgcct tcccaggagg gtgaggcggt ctctttgtgc
       61 ttttctgtcc catgtgaagc aaaccaaagc gggagagtga gggtcatagc tattcggcag
      121 ggtaccagat ccttcccacc ggcacatctg catgtgaaat cgccatttca cccctccaca
      181 ctccctaatt gttgctaaaa ttatttgtga aattgccttc caccaggagt gttttccacg
      241 gcaattgtca cacaatttta tatgcacggt gggcccacag agttgacaca tgcacctctt
      301 cttttctgcc atatgtgttc tttttatccg agtttaatag tagcgcatta ttttttttta
      361 acaattacct ttaagcaatt actctcgtgc gtactggagg gcaagtcaac ctgttgtcat
      421 caatagc
//
LOCUS       KCHQ01000645             590 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 72594cha ultra-conserved
            element locus uce-1041, sequence.
ACCESSION   KCHQ01000645
VERSION     KCHQ01000645.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72594cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-1041"
BASE COUNT          175 a          101 c          129 g          185 t
ORIGIN      
        1 catcttaatt gttgtaaatt ttgtacagtt tgaaaacgtg ttgatcgtct tgtttcatga
       61 gcgctattta ttattgccat gtgtctttga aaaagatgta aaagagagca ctgaatttat
      121 tcatttatgc cttctgtgta atggtatgaa ccgtgtacag tcaaatctat atgaggaaaa
      181 taaagctgaa ttgtctttgg gttaccctcg agtgcatttc tcctcagcag agccggcctg
      241 cagtgatgaa tgtgggagtt aagattttca gccgaacttt gttttcaata tatcaaaaga
      301 aaaatatctg ctgtaggtgt ttttattatt tttgccttat ctaaacgctc ttagagcgag
      361 ttaacccgca aattcattta cccattgaga gcatttacca cacacttagg cctctattca
      421 attgtggaga tccatttagt accaccaaca gacagtggtc agtcagttaa cagtgattga
      481 tgctgctttc ctctctcgct ctcggggtgg gggtgacaag aaagatgcat gaagagagag
      541 aagaaagaga gaaaaaataa aacaagtgga gaaacagatg cttggctgcg
//
LOCUS       KCHQ01000646             753 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 72691cha ultra-conserved
            element locus uce-1040, sequence.
ACCESSION   KCHQ01000646
VERSION     KCHQ01000646.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 753)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 753)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72691cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>753
                     /note="ultra-conserved element locus uce-1040"
BASE COUNT          217 a          190 c          155 g          191 t
ORIGIN      
        1 gtcagcaggc attatgagag cagggagtga ggagagcttg agagagcagt gactcatgga
       61 ggcatctcta cagtgaaaag cttggtatcc tccaacagag gaaacaggct tagtggttgg
      121 aggatagatc ttttttttcc ttgccacagt taattttcaa atctccaaca tcctatggct
      181 gtctgttttt cttcttcttc ttttctgttt ttttctgctt ttattctttt cttttaaaat
      241 gaaactggag ctggggcggt gatagtgata gatggctcag cgctctaaca ctttatccaa
      301 tccggcgcag atttcatcca ataaagaatc acttgtgcac tctcaaacta aatggaagtc
      361 aggcagcgga gagaaagggg ctgccgtgtg tttctgagct gcgaaaatca aattttctta
      421 aagctgccgc agcagtggct ggcggaaaaa gcagcaacag ccatgactgg ccagggccac
      481 gtctgcacac acaatttaat ccatcacaga gcgcctgaca ccatatcaat caacctttca
      541 tcagcatgcc ccccccaaca tcccacccca cccctccaaa aaagaaaaaa aaaacaatat
      601 ttctattcaa tcacctctga ctgaaccagg cctacaaccc actgaccaat ggggaggacc
      661 agagaactcc agctgtgaat tctcttcaca tgaacacaag cataaagtag aacacacgca
      721 cacacctgct tattctcgtg tgtgtgccca aac
//
LOCUS       KCHQ01000647             357 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 72875cha ultra-conserved
            element locus uce-1042, sequence.
ACCESSION   KCHQ01000647
VERSION     KCHQ01000647.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 357)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 357)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72875cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>357
                     /note="ultra-conserved element locus uce-1042"
BASE COUNT           97 a           72 c          100 g           88 t
ORIGIN      
        1 aggggcttcc ccctatggtg agggggatga aaagtacgat ttaatgttct ctggagagtg
       61 gcagcagaag aaaagctcaa agccctgcat gctggtttct gagtgggtca ctccagccct
      121 tgcagcgaat gggatgtccc ttaggaattt gccatagacc agcctgaaag gctggggatt
      181 aagacccttt taaggatgga aatgtaacaa aaggagcact tttatgatgt agcagcataa
      241 aatgaggggg tccattgtgt aactgattgc aaaagatctt tgaaacaggc ggctctgcac
      301 tgcatgctcg cctggcccag tgggctttaa cggcttgtac aaaatgactt gtctaca
//
LOCUS       KCHQ01000648             854 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 72971cha ultra-conserved
            element locus uce-1324, sequence.
ACCESSION   KCHQ01000648
VERSION     KCHQ01000648.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 854)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="72971cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>854
                     /note="ultra-conserved element locus uce-1324"
BASE COUNT          231 a          157 c          179 g          287 t
ORIGIN      
        1 taatttgatg gccatggaga atgggtccat cttaatattg cctttcgtct ttgatgttgt
       61 ttctcgtgtt tcgaggcaga ggaatgatga aataaagaca gagcaaatgc aaatgtataa
      121 tggaaatatt tatttctaaa atacacttta acatacttta aacttatgac tgttttttga
      181 caactttatc atttcaaggt caggaaagaa aataaaaaaa caacattatg tacatggtct
      241 tgatatttac aggtggtgtg aacgctggac atggccattg gctctgctgc tgtcccactt
      301 gaggtgcaac caaatcccac tctaaaatgc gccgcagtaa acgtgtcctg atttggagat
      361 tgtctttgag caaaaaaaaa gtcgctgact tgtcttcctg cgttttgtcc attgttattt
      421 tgttagtctg tccaggctag tagtcctgat gtgggctgtg cgtcaaactg tgccgtcgca
      481 agtcacagtt gcgccgaaac acctttccgc agcggccaca gctgtagggc ttgatgtctg
      541 tatgggtgag aaggtgagtt ttcaggttac ttctttgatt aaaggttctt ccgcatgtgg
      601 ggcatttgtg gggagactcc tgtttagatt taaagcaagc aaaggattat tccctttaat
      661 tgtatagaag gtctatcaag tgtatctttc aatcatctaa ataactgtca gttctaactt
      721 actgatttac acattatttc tatacaacct atatgtttat gtctcactta catttttgtt
      781 ttaatttaat aactgggcaa acgcagtcgt tttgtgagac ttactaacat ccccttgcat
      841 gcagtagaac gtgc
//
LOCUS       KCHQ01000649             256 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 73063cha ultra-conserved
            element locus uce-1325, sequence.
ACCESSION   KCHQ01000649
VERSION     KCHQ01000649.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 256)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 256)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73063cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>256
                     /note="ultra-conserved element locus uce-1325"
BASE COUNT           70 a           52 c           88 g           46 t
ORIGIN      
        1 cattgagagc cctccatctc tttcctgtgt gctccaaagg gcgtcgctga cgccggtcga
       61 tggggagagc agccgaggcg ctgtgtttag cataatccca gaggccattg tgagagcagc
      121 tagtgatcga ctcacagttg ccagctgaga tttcaccaaa acacagcaga acgtaaggag
      181 aaggggatga gacaggaaaa tcagaggtgg aggaggggtg agagtgggga aagagcttgg
      241 acgagagaca ggattg
//
LOCUS       KCHQ01000650             319 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 73100cha ultra-conserved
            element locus uce-1289, sequence.
ACCESSION   KCHQ01000650
VERSION     KCHQ01000650.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 319)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 319)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73100cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>319
                     /note="ultra-conserved element locus uce-1289"
BASE COUNT          100 a           53 c           81 g           85 t
ORIGIN      
        1 gaacccatta tggtgatggg ccccgatatc aattataact tcaatttcaa tttcacttac
       61 agccgcggca gcaaaatggc tccgggtggc ggagtcgagt gatgggctcg gtgccacgga
      121 gcatgacgaa tacagatcac tgcacattag gatgagcaat tatttgaaca tgtataaaaa
      181 ctatttacaa gcaatgtaat tgaccagggt cagggggaga tgcaggaaaa atggacaggt
      241 tgacaaattt ttgttcttac cgacagaaaa aaagggattt attaatttct ttgaggctgt
      301 aattgaattt ttgagaggg
//
LOCUS       KCHQ01000651             440 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 73167cha ultra-conserved
            element locus uce-1288, sequence.
ACCESSION   KCHQ01000651
VERSION     KCHQ01000651.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 440)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73167cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>440
                     /note="ultra-conserved element locus uce-1288"
BASE COUNT          126 a           82 c           89 g          143 t
ORIGIN      
        1 ccaggtccag cttatcttgt catttcaccc tcaattatta gaagtattga caaaatgttt
       61 tctcccttct ctccgtccta atgcaggccg ttaaatgcca agctccacgg gatcgatgtt
      121 gaacaaagca gccagctgca gtggcgttca atatgaagga gatatttggg acaatttgtg
      181 ggtttttatc caagtgaggc ttttttttcc attctcataa atgcaggcat aattagggta
      241 atttttgatg tagcccgctg attacagcgt ttttaccgtc aaagataatt acctgtaatt
      301 ttctaccact tttaatacta aaaggcatct ttatttgggt ttgaggtagc acagatggaa
      361 caaaagggaa aattattcgg ttattcatat acaaattgct gagaagagtg agcgctcggg
      421 atattatctg aaattacaac
//
LOCUS       KCHQ01000652             503 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 73340cha ultra-conserved
            element locus uce-1321, sequence.
ACCESSION   KCHQ01000652
VERSION     KCHQ01000652.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 503)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73340cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>503
                     /note="ultra-conserved element locus uce-1321"
BASE COUNT          132 a           94 c          106 g          171 t
ORIGIN      
        1 ggcatgacac ctctttgaaa aatgcaaaag tgaacagatg gatgtgtgcc accaaaagct
       61 ctcattgcgg cgggctaata ctacgccttt gactgcaatc cctgcttgat gttatcagtt
      121 catcttcttc tgtggtgttt ttcttttgga atgggagaaa cattttccct gtggattgga
      181 aggttttcat gagcaggcag aaggagaaaa tattgttgac attaaactgt tcttctttaa
      241 gggaattgtt gtgacaaggt ggagctccca tcactcgaaa tagcagctgt gtgctgttta
      301 caaaggggcc caaagcaatg tttgtttcca ttgaaacgct ggcaactttt tctgtctttg
      361 taatgaagaa gcttctggca ttatatgttt gctctcacat ctactgtcat cataatacaa
      421 tatttttgta gcaacagtgt tagcgttgtt acaaatttac aacttctcct gcgattatga
      481 tgttttttaa ttattaccac agc
//
LOCUS       KCHQ01000653             285 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 73434cha ultra-conserved
            element locus uce-1323, sequence.
ACCESSION   KCHQ01000653
VERSION     KCHQ01000653.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 285)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 285)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73434cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>285
                     /note="ultra-conserved element locus uce-1323"
BASE COUNT          101 a           44 c           51 g           89 t
ORIGIN      
        1 taaacaaaaa taaaacaatg aaaacagttg cataagaaaa ataaaagact tactcaaaga
       61 cagtttgtta gtgttgtcct ttcctggtaa taattttacc cctctggatt taagctctcc
      121 agagcttttc actggtcgag agcaatagaa agagttcatt agataaaaga agttacagta
      181 ttagatgtga gaagatacag tacatgtgtt tctttctctg gataatactt ggtcctatga
      241 agaacatcaa aatgtaattg ctgctggtgt gcatcctttt tcaaa
//
LOCUS       KCHQ01000654             562 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 73530cha ultra-conserved
            element locus uce-427, sequence.
ACCESSION   KCHQ01000654
VERSION     KCHQ01000654.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73530cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-427"
BASE COUNT          153 a          140 c          120 g          149 t
ORIGIN      
        1 tatgctttac aaatgctata tgtagctatc tgtgcctctg taaaataggt caatagattg
       61 tgtgtgcgtc tactctccga tcagatggtg ttctcatcca gggctattaa tgtgctgatc
      121 cactaattgg gagagcttgc tctcttaatg caatggcctt ctaaatgtgt ccgtcccagt
      181 aatttaataa tggccatttc atgctactct gacttttcaa acagcttgct cggggcagct
      241 acagggactg gttattgatt gaaactccta ggctgcccag gctaggctgt gggtgagaga
      301 gcctgttcag tctgcttccc agagtccaga tgcaaccaca gcccccccac cccccacccc
      361 tcccttttct ccacatgcta ctcataaaca cacaaacacg aagcttggac gcacaaagga
      421 acaagtgaat actccctcat aaatttgcac gttccgctga gatcctctgc gccaggcttt
      481 atcagtggag cacatatgag agctttaagt agaaaagaca taagaaactg cagtggaaag
      541 aaaatgtcac agaagtgtga aa
//
LOCUS       KCHQ01000655             279 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 73622cha ultra-conserved
            element locus uce-1282, sequence.
ACCESSION   KCHQ01000655
VERSION     KCHQ01000655.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 279)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 279)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73622cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>279
                     /note="ultra-conserved element locus uce-1282"
BASE COUNT           78 a           62 c           52 g           87 t
ORIGIN      
        1 tatggcgttg ggggactttt ccatcattaa gtgaatttac agcgatttcc ttatgtgttt
       61 tctccaaggg attgggttat gagatgcaca ttaaatatcc attaatacct cattatccca
      121 ctgataagat taccatgata atgaggcaga aattctaatt gtttcacttc ttgttgtgcc
      181 actcatttaa tcatccacct gaaagacaag tactctgcgc ccctaccttg aagactgtaa
      241 acacggacag caggatagag ctctcccacc gtcattgag
//
LOCUS       KCHQ01000656             383 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 73885cha ultra-conserved
            element locus uce-423, sequence.
ACCESSION   KCHQ01000656
VERSION     KCHQ01000656.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 383)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73885cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>383
                     /note="ultra-conserved element locus uce-423"
BASE COUNT           94 a          103 c           89 g           97 t
ORIGIN      
        1 ctgcggcctg gcccgtggat tactgtttgt taatgtttca atcagctgtg tgttgaggaa
       61 tgtggagcta tttaacctga acttccccag gtgtgccgag gcgccgctca gtctgggccc
      121 cgccgccctc ccctgccctt ggcacaaagc tatcacacaa acacaatcac acactggcca
      181 cgccggggct gcagctgtgc gcatcgcacc gcagggaaat gggaaaaaca ttgcaccagg
      241 gagacagaat aaatcttata acgaatcgcc tcgccaaagc cagtttaacc cctggagcgc
      301 caggagagac ttacactgct gatttacacg gtaacatatt ggaacaccac atttaaatgg
      361 attttttttt tttttttttt tta
//
LOCUS       KCHQ01000657             335 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 73987cha ultra-conserved
            element locus uce-422, sequence.
ACCESSION   KCHQ01000657
VERSION     KCHQ01000657.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 335)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 335)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="73987cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>335
                     /note="ultra-conserved element locus uce-422"
BASE COUNT           94 a           62 c           82 g           97 t
ORIGIN      
        1 attaggccgg cctgtttcta gttagacagt cattaaagag atcttacagc cacagcaaat
       61 ggtttcctgt cctgagtgct taactcctgt agtaggaaat gtcctaggcc gtaaagagtg
      121 aaccaaactt cgatgggagt ctttttgaca ctgctgcaat aaaatttaca aggaatccct
      181 ttttagcgtg atgcgaggca aagtgtggtc aagaggggaa aaacatgctt gaaaaagtag
      241 caggccatta aagttatcat ttgtctttgt ttatgtggac tgggaactac ggatggctga
      301 catttaaaca gcatttgatc ggctttgtcc ccggt
//
LOCUS       KCHQ01000658             886 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 74081cha ultra-conserved
            element locus uce-1285, sequence.
ACCESSION   KCHQ01000658
VERSION     KCHQ01000658.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 886)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74081cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>886
                     /note="ultra-conserved element locus uce-1285"
BASE COUNT          198 a          218 c          142 g          328 t
ORIGIN      
        1 cctcaacttt tggccacatg gtgtcatact cacatttatg tcctgcactt tattatcatt
       61 ttattttctt tctctctctg cccaggtagc agtttgtccg tacagagtat tatgttagct
      121 cacatccagc ccctaagccg ggcagtgttt ttgatttaca atcacttgct cgggacaaac
      181 ataagacagg cttccccttc ctccattatt ttactcatct cacttcacac tgtgaggtgc
      241 aaacccatac tgtatatttc atttcttttt tttccccctc cctcccctgt tttaagtctc
      301 cctggatgga gcctggcttg cggtgcacca ttttcccagc tacagtagca gtggtgctgg
      361 gccctgttca accccattat ttctgggagc caaattccca tggtcccagg aacaggcgtg
      421 ccagctctgc cttcttggct ctcttccctg gtattgtttc ctttgttaca tccagagctg
      481 catttcagcc cgttaatgtt tgcgctggga ggtccaaatt cccagtgttc agctttagaa
      541 aaggtaactt gaagttcaga atgcaaccac tttttttttt cttccgcaaa ttatgttttt
      601 ttctctttta tttcttccat ttttgttctt tgttgtgata tagtatatac agaggtaaca
      661 acaccataaa cttgttcagg ataaaattct tgcatgcaga gcaatcataa aatccctggc
      721 tgtacaaacg ctttagccag atgtcttatc ttttttttca ttattacttt agatcaattc
      781 attcattttt tatttcttta ttttttttaa ccatgcgtgg aactaacctc cccaaagaaa
      841 aggtcgtttt tcagtctgca cagtaattaa acttttcacc taatat
//
LOCUS       KCHQ01000659             575 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 74179cha ultra-conserved
            element locus uce-420, sequence.
ACCESSION   KCHQ01000659
VERSION     KCHQ01000659.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 575)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74179cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>575
                     /note="ultra-conserved element locus uce-420"
BASE COUNT          157 a          129 c          129 g          160 t
ORIGIN      
        1 gttcctctct tttgatgatg cagactcaat tctaatcaga ctccatggga agaaaaatga
       61 aatattatta agtatgatta ttctaagcaa ggctctgaga aaacgtctgt gttataatcc
      121 agggatttga ataatcaggt tgaagataat gggctgggcc ggcctgggcg taaatagaga
      181 gcatccactc atcctcccag cgctgaactt aatgaacttt taattgatgt ggttttgcaa
      241 gtccttttgt catgcaacag aaacaagcct ctctgctgat gggcctgttt tcccgactgg
      301 cttcagattg gtttacagca ggccctaagt accatgtagt tagtttcatg tgtcatataa
      361 aatctgccca ggcacaacga cgcctgcaac taaaacctta agtgcatcca caggaatcac
      421 tcaccggctt tgcacttccg tcttaaggaa ggaggagaaa ttcaatcact gccggcttga
      481 cacaccgaag acgaggcacg tgttcctgct tttacttgtc tcagagaaca ctctggcgag
      541 gcaggctggg atttctgttg gtctgaataa catcc
//
LOCUS       KCHQ01000660             405 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 74271cha ultra-conserved
            element locus uce-940, sequence.
ACCESSION   KCHQ01000660
VERSION     KCHQ01000660.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 405)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 405)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74271cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>405
                     /note="ultra-conserved element locus uce-940"
BASE COUNT           78 a          106 c           94 g          127 t
ORIGIN      
        1 tccttgtgca cggtggggtt cgtatttgtt ccaggccccc agattcacat tttgtttgca
       61 cactcacgaa acgtgtgtgt gtgcatgttg gcacgtgcat gtccacagtc atgtcactca
      121 gtgtttactg tgcagccctg ctctgtttgt gccagtagct tcatgtctgt aaggcatgct
      181 atatgaaaag tgaggttgtg gagcccagtg ccggagccag tgaattcatt tgcattcatt
      241 ccactgcctg tctctcctca gagcccattc taattaccag cagctcaggt ctgctacaac
      301 actgcgcata ctctctccct cagtgaaaaa atgggctgct ggtggtgcat tcttgtagct
      361 ttgatactac tctctcttta gcctgccagg aatctcctca tgttg
//
LOCUS       KCHQ01000661             622 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 74315cha ultra-conserved
            element locus uce-941, sequence.
ACCESSION   KCHQ01000661
VERSION     KCHQ01000661.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 622)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 622)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74315cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>622
                     /note="ultra-conserved element locus uce-941"
BASE COUNT          216 a          116 c          118 g          172 t
ORIGIN      
        1 cctatgagtt gaaaattcag aaagttaatg caccattaaa aatgaaaaaa gagagatatt
       61 gtacttgaac cctttagaca cttttcagat caaggttcca ggaaggaaag gtttccttag
      121 ttgaaactct tacaatcaat gtgaccttta tttattataa cccccatctc tcaaaaactc
      181 acatataaca tagtcaatca tctctccttc cctcaaagta aaaataaaaa aggaactgct
      241 gtctggttat tgccagtatc catctcagtc gtcagaaaag ctgcacgttt ttgctgttgt
      301 taagggctgg aaaccagaat cccatcggag ttgcacccta aggaacaaat ttaatgctag
      361 aaaaacatcc cgaccatcaa ccaaaaatga cggattgaaa ataatgtcga gctatcttgg
      421 gaatccccca ccagacaagg gaacagactg cattgttttt ctcatttatg tgatatatag
      481 aacagaaaga ggggaaaaaa tgggcgattt attggttaga taggcgtatt cttttccatg
      541 cacaaaagaa atattggata gtaatgtggg gatcaagtca catcatgaca ttgtttggag
      601 gctaggtgct caaatatgta ag
//
LOCUS       KCHQ01000662             412 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 74478cha ultra-conserved
            element locus uce-944, sequence.
ACCESSION   KCHQ01000662
VERSION     KCHQ01000662.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 412)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74478cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>412
                     /note="ultra-conserved element locus uce-944"
BASE COUNT          137 a           99 c           72 g          104 t
ORIGIN      
        1 tgtgtaagct tagtgtaatg ggcaaatggg aaagcgcatc tcctatggta cagcccatga
       61 acctagaaaa ccctgaatga aacatcagta ttaagtttgg tctatcaccc aaagctgcat
      121 taggtctctc ctcagtttgc tccttaattc catcggagta atcccacatt attgccctct
      181 aacagtaccc taaacggaga ataaaaagtt tgctcccctc tagcagtgta ttaccaggaa
      241 acaacaggcc ctctcctcat taagttatag atataaatgc tccaaagcat gaaattaccc
      301 ccgagcctcc ctctccaaat aacctggttt gcaaacaaat gatccgagca caagcagtaa
      361 aaggcagatt attaaaataa taggagggat ttaaatttgc atccacagaa ca
//
LOCUS       KCHQ01000663             240 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 74569cha ultra-conserved
            element locus uce-945, sequence.
ACCESSION   KCHQ01000663
VERSION     KCHQ01000663.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 240)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 240)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74569cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>240
                     /note="ultra-conserved element locus uce-945"
BASE COUNT           56 a           43 c           60 g           81 t
ORIGIN      
        1 tccctctaaa atgttaatta agcagggctt tgagattttt ttgctcaggg ctggccatat
       61 gggccgggca tatgttctat atatatagta caatatataa ttcatacact gctgcaggag
      121 agagtgtttg ggggcctgga gttttttggg gtttactaca aagggagtca gtatgttctg
      181 gcctccccag tggcaggtac agagcttagc ctattcatta gcttcatgtt attcactgtt
//
LOCUS       KCHQ01000664             403 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 74656cha ultra-conserved
            element locus uce-946, sequence.
ACCESSION   KCHQ01000664
VERSION     KCHQ01000664.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 403)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 403)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74656cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>403
                     /note="ultra-conserved element locus uce-946"
BASE COUNT          122 a           87 c           81 g          113 t
ORIGIN      
        1 caatttaata ttagaataaa ttacaaatgg aagagtgatg cctgggatag atttttcttg
       61 cgggaagttc agactccgcc aacattaatg tccctcgcca ccgttggagg cataaatctc
      121 tttttccctc tttttgcctt gaatcatata gggatattga attactcccc tgctccccac
      181 acatagaggc attgtgcatt acattgactg ataagctgtc accagcagtt taacttagag
      241 acattcaaag agtaatacac cagttgagga taaactaacc ccagtcccct tagagtaagc
      301 tatggcgctg tcacagtgaa aaatacgacg ggggcatttc atatagcatg cagcatctgg
      361 catctgaaaa tggaggaaaa tacctctgaa caatgcttgg ttt
//
LOCUS       KCHQ01000665             312 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 74750cha ultra-conserved
            element locus uce-580, sequence.
ACCESSION   KCHQ01000665
VERSION     KCHQ01000665.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 312)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 312)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74750cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>312
                     /note="ultra-conserved element locus uce-580"
BASE COUNT           70 a          107 c           61 g           74 t
ORIGIN      
        1 ctgtcatccc cctcaccccc agccacggta ttcctacccc ggcctcggct ctctcagtcc
       61 ctgcctctcc tccagcctgc cttcccctct actctgcctc cctcagcccc agccttctac
      121 tcagtgttca aggggagagc cagctaggaa tgctgtggct ctagacgttt tgtccaagcc
      181 ctaggtctct ttcactgagg caagattagt tcatacaaaa actcaacaat acaccactga
      241 aagccattgt tgatattcaa catttttcac atagcggagc agaatagaca atgcggcagg
      301 cgggaaagcc cg
//
LOCUS       KCHQ01000666             559 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 74847cha ultra-conserved
            element locus uce-581, sequence.
ACCESSION   KCHQ01000666
VERSION     KCHQ01000666.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 559)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="74847cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>559
                     /note="ultra-conserved element locus uce-581"
BASE COUNT          174 a          110 c          148 g          127 t
ORIGIN      
        1 gtcacagtca acctggccac tttgaaaaga aatgactcag ttcctctaat ataagataat
       61 aattgctaga agaaatcagg agggcaacag tgctccttgt tgtggtgaat gtgtgtctag
      121 cttttttttt tcctctgcac tgtgagtgac acctaccagc agacatcaac acaaaggcgg
      181 agaacagggc gatctcatcc tcagacaggt gcatagaaca caagtttttc ccaaactcga
      241 agacggagct gatcaagtcg tcacagcctg ccacagcaaa ggacacagag agagggctta
      301 ggatgaggaa gaccaaagaa caacattcac tcttgatctt tattgggaga gaggcacacg
      361 gggaggggag aggaagggga aggaatgaaa aagagcggca tgctgacagc acatgggagc
      421 gtcttaagca gaacaggcaa tgcttttact gagttttgcc tcccagacga gtcacttttg
      481 gcagttgggt ggtgttatgc aagccaaaat gaggtcacta ttgaggcttt tagttaaatc
      541 aattatcgag gatagaaag
//
LOCUS       KCHQ01000667             749 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 75024cha ultra-conserved
            element locus uce-583, sequence.
ACCESSION   KCHQ01000667
VERSION     KCHQ01000667.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75024cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-583"
BASE COUNT          191 a          177 c          158 g          223 t
ORIGIN      
        1 cacacacaca cacacacaca ctcacatact ccactttcct ttttcactta aagaaactcg
       61 cagcataaga aaacaaaatt cttcacagtg ttctggtccg ctgtgcttca gactggagta
      121 gcactagagg taatctcttc cattttaaca tattttgaga ccttcttctg acgaatgtca
      181 catgctatta cattaatcta gaatattgaa ttggaagctt ttatgcacta tgaataatat
      241 acacactgtg atattcaggc gagcttcaac ctgcagtatc agcgggcccc tcagtaaggt
      301 ttgtggagcc tactttgtgt ggggatctga ggggatcatt taccagttcc aactccatta
      361 ctattcatga gatgggtagg ctaggggcga gggattaggg actcccttgg tgcttgttgt
      421 gctgtaggct cgggctcagg cctcaggctc cgggacaggg gctgtctggc acggatggtg
      481 ggtctattat caccctggga cccttctgtc ccacagcaga acacttactg gcagcgccag
      541 ctaatggaaa cagtctctct tgttcccttt ctcttttttt ttaacctcgt caccctcctg
      601 gtatccttcc ccctgctctt taaaaaaaaa aaaaaaaaac gatggggaag tttttccctg
      661 tccctatttc aaagttgaaa tggtgtattt ctattggcat ctttaccgtg aagtgctagg
      721 atggctctat atttgcagaa aaaaagtac
//
LOCUS       KCHQ01000668             240 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 75119cha ultra-conserved
            element locus uce-584, sequence.
ACCESSION   KCHQ01000668
VERSION     KCHQ01000668.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 240)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 240)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75119cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>240
                     /note="ultra-conserved element locus uce-584"
BASE COUNT           52 a           57 c           65 g           66 t
ORIGIN      
        1 catgagatag agagcaagtc tgaccatgta gcctcgtcca cctcgccgcg gtctgacagc
       61 acacttcgct ctggcaggcc agtgtgattc caagggctta catgccccaa atcacacaag
      121 gcttttacag catcaggcag atttgatggg agctttcatg gcaacgtggc ttgtggcctg
      181 tgagatgttg ttatctgacc taaatgcttc taacaagtct gtgtgtgtgt gtgtgtgtgt
//
LOCUS       KCHQ01000669             304 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 75208cha ultra-conserved
            element locus uce-585, sequence.
ACCESSION   KCHQ01000669
VERSION     KCHQ01000669.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 304)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 304)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75208cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>304
                     /note="ultra-conserved element locus uce-585"
BASE COUNT           76 a           87 c           62 g           79 t
ORIGIN      
        1 tctctctctc tctctctctc tgcctgtctc tctctctctc tcgctctctc actctccccc
       61 agtctcaggg ctcaccatac tcaatgagcg gacagcgcaa tgtcagagcg ctctgggcaa
      121 actgcaaagg ggaaggaagg caaaaccaag tatgcgtctc tcaacctgtt tgatacatac
      181 aaaggaaaga gccttgaaac acaaaagcct gttggtgagt atcatgggtc tggcatgtcc
      241 gtgcagtcat tttcagatca cacatccagt gtaacaaagg atttccactt tgctatacag
      301 tgca
//
LOCUS       KCHQ01000670             292 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 75487cha ultra-conserved
            element locus uce-458, sequence.
ACCESSION   KCHQ01000670
VERSION     KCHQ01000670.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 292)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 292)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75487cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>292
                     /note="ultra-conserved element locus uce-458"
BASE COUNT           81 a           55 c           69 g           87 t
ORIGIN      
        1 caaaagtgcc cccttatttt attcccctct ctctttcagc gggatcctcc aatgaatggc
       61 attacagaca aagccagatc cagagtgaca caaatttatt tcggttgcag cgccatagtg
      121 tatttccaca gaaccagggg cgatttgtct ggggacaatt tggtttccat aaaggattta
      181 aatggtttct gtggagatag tggggtgaaa tttaatttgt ttctcattta ctacagcagg
      241 tatgaaaagg agaaaaattg gacggctgat gggctaaaaa ttggtgctgt cc
//
LOCUS       KCHQ01000671             376 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 75579cha ultra-conserved
            element locus uce-830, sequence.
ACCESSION   KCHQ01000671
VERSION     KCHQ01000671.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 376)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 376)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75579cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>376
                     /note="ultra-conserved element locus uce-830"
BASE COUNT           86 a          102 c           65 g          123 t
ORIGIN      
        1 cctcatccaa catttttcca ataccacctc agctgatgta tggctgttta agagtgactg
       61 tggtttgaca ttacacagcc atcctgtgag gtacctgtac tgctctcttg gtccttattc
      121 taatcttatt taacagtctc tgcctgacac gcaattcaat gcaggccccc agattggaga
      181 gtttccaaac aatcctgagc tcacccaagc ttggaattgg ttttccgtgg aacatctccc
      241 tcctcccttt gggcacttta ccaatttgac caaatttgtt ccatcactgg ttctaagtac
      301 cagaagtgtt ttctgcccac acttggactc gtttctgcaa tttgcacatt ctttgcagaa
      361 cattaacagc tttgtc
//
LOCUS       KCHQ01000672             865 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 75767cha ultra-conserved
            element locus uce-61, sequence.
ACCESSION   KCHQ01000672
VERSION     KCHQ01000672.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 865)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 865)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75767cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>865
                     /note="ultra-conserved element locus uce-61"
BASE COUNT          271 a          198 c          176 g          220 t
ORIGIN      
        1 ctctccaaat cccaaatgag aggaaattac tcatcaagtg attatgaaac tgttggcatt
       61 atagaaatca gagtgaaaga atagagtcag gaggaaagga gggagggggc tggcaatttg
      121 ttctcaatgg acagcggatg aagaggtggc aagttaaagt ctccaatctg aagggtctcc
      181 ttgtaaagct aattccagtt aatggccagg gaacaaggct ccgctaaccc actgtatctg
      241 acatccaggc tccaggtaat cagactgaca ttaatgcagc ctccaaaaga gacacctcgt
      301 catcaggaat tttcctcatt ggcaccgaaa atgccaggct gcacacctct gactgcgtgg
      361 cccccacatc tattaacctt attgatttgg agccctgctg agcccctcca gagctcccgc
      421 ccccctgctg ctggactgaa gtggatcaat cctacgccgg gggccacaac tcgataacaa
      481 cccagtgcca gagactactg tttacaacct gaaatgaata cactcataga tgctgctctg
      541 tatattcact gctcatctat ggacagtttt gcatctgaag gctttaaaag ttttaagaaa
      601 tgttagttat acctaaataa tggctggttt acaggaaact aaccactagt agttacccat
      661 gtccaggtgt gctattttag ataaaaagac aaaaatttga atagcaaaaa taagaaatta
      721 agtacagata tttgtcaaaa gagcacatca ctgtacagta tattaacctc tgctgctacg
      781 accaggcagc caaaactact ctgctcattg atttttcact gcagttaatt tacactaaca
      841 aagtgccctt cagagtaaat attct
//
LOCUS       KCHQ01000673             303 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 75849cha ultra-conserved
            element locus uce-66, sequence.
ACCESSION   KCHQ01000673
VERSION     KCHQ01000673.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 303)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 303)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75849cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>303
                     /note="ultra-conserved element locus uce-66"
BASE COUNT          101 a           64 c           93 g           45 t
ORIGIN      
        1 ctccccccgc ccctagcaac cccggccccg gcaacgaccc cgaggagtca tagcgaatct
       61 gcaggccacc aatgggagag ctgaacgaag ggacagaaag agaggaagga agagagagag
      121 ggagagagag agcatgggta gaaaaggaga gatagagagg tcaatgggga gattaacgac
      181 ccaacataaa cgtcagacaa acatagacac tgctggctat aaaactacat caatttgttg
      241 ttacagtggc ctctaatgaa aaggggccag gctttctgtc tgtgtgtgtg agagagagag
      301 aga
//
LOCUS       KCHQ01000674             444 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 75941cha ultra-conserved
            element locus uce-67, sequence.
ACCESSION   KCHQ01000674
VERSION     KCHQ01000674.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 444)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="75941cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>444
                     /note="ultra-conserved element locus uce-67"
BASE COUNT          106 a          124 c           95 g          119 t
ORIGIN      
        1 ctttttttcc tttcatctct ttcccagtaa aggcaagaga ggggcttatc ccttctgttt
       61 cctcacgact tcctctctca aattcctggc ctattacaca gctctcacat accagaaaca
      121 agatgccttt ttatactgtc aaccttttca tctgaaatgt aaattaattc ttactcagtg
      181 tgccttgacg aagatcaaag tgggcacatt aaccttcccg ggtgcccccc cacccccccc
      241 tccttggagc ctctcactgg aggacaaggg agggtgccaa aaggggcagg agagaggagg
      301 gcagggggag gagatttggc attgtttccc ccagctctcc taagggctgc cctcatctgg
      361 cacatggagc atctcagtcg cctgcacacc ttgtgtaaat gtcctccatt aaaactcttg
      421 taaataacgc tgcagaatgg gtaa
//
LOCUS       KCHQ01000675             572 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 76135cha ultra-conserved
            element locus uce-65, sequence.
ACCESSION   KCHQ01000675
VERSION     KCHQ01000675.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 572)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76135cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>572
                     /note="ultra-conserved element locus uce-65"
BASE COUNT          149 a          100 c          177 g          146 t
ORIGIN      
        1 catgttttaa aggcattgtt gtgctttgtg ttatcatcga agggaaaaca caagcgttgg
       61 atggaagcag agacaagtgt ggagctttta cagatcatct gcgctatgat aatgtctgca
      121 gggggtgagg gcgtgtgtgt gggatgaatg tgtgagcgac ttggcccatt ttttgactgt
      181 ttgatgtcaa gggtcagcgg gtgatttgtg tgcatgcaca caaactggcc cgtgcgtgag
      241 catgcatgcg gggagggagg agggtgagca ggaggccagg ggaaggagtc tttcaggtgg
      301 aataaaagca ttactgcagt ggtagaaagg tcagctgtaa acttgtatca gactagtggt
      361 gatcaccctg tgctgcagat ctctgaggta ttgagcaggc acgctctaat ggctttgata
      421 tatggactac aggactccct gaagaggtca ataccatagc actttgtctc tatgagcaat
      481 gaccctctca agctccattt agaagcttta tatctgcagg aaataggctg gaaaggcctc
      541 aggcagggca cggtgaaaga gaactaatat ga
//
LOCUS       KCHQ01000676             578 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 76237cha ultra-conserved
            element locus uce-68, sequence.
ACCESSION   KCHQ01000676
VERSION     KCHQ01000676.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 578)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76237cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>578
                     /note="ultra-conserved element locus uce-68"
BASE COUNT          141 a          130 c          148 g          159 t
ORIGIN      
        1 tatgtagctt ttctcttcca tccctccctc tttctctttc tctctgccca aggtgatacg
       61 agtccctccg ttcatccgat ctccacatct ctccctcttt ctccaccttt cattccctca
      121 cttccccttc gttccatcta cccaaattaa gaaattaatg agggataggt tctttaccaa
      181 ctgcccccgc aatgtttacc actgatgaaa ttataatgta ggccctgctg tattatttat
      241 aagccaatta ggggaagtgt tacttgattt gatggggagc cgacacacag agtacattta
      301 actaatggag accaagagag taaagggaag gaggggaggg aggacagctg aggcggacta
      361 tttcgtacga tgctctagga ttacgtggct aattgccctg ctttatctgt ctgtcacgga
      421 tagccatgca tattttagcg ttcccaaaga ctttgattgt ttgcactcgt gttggggctg
      481 taacaagtag agcagaggcc agagtggagt gtagttaaaa actggcagca ggggaggcag
      541 ggagggggcg gcggagagga ggtagaggag gggagaag
//
LOCUS       KCHQ01000677             407 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 76335cha ultra-conserved
            element locus uce-69, sequence.
ACCESSION   KCHQ01000677
VERSION     KCHQ01000677.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 407)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 407)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76335cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>407
                     /note="ultra-conserved element locus uce-69"
BASE COUNT          112 a          117 c          102 g           76 t
ORIGIN      
        1 agctgccacg atgcacaggg ctcaggggtt ggggcggaag acaaagaaca gcggaaggag
       61 tgcatgaggg gaagagacga acgggcgggg tcaaactcct ttccctgcat gggggctcct
      121 aacactttca gtataacatc aacatatcac tgtccattcg tccccttgcc ctattgccca
      181 tgtcctactt gcgtgtctcc ctacaccaac acgcctaaca gtgcaagcac acaccccaca
      241 actatgcacc atacacacac aaacactccg ggagccagcg gccacttcag ccgtaattcc
      301 gcctgacttc cgctgtctga ctggcaggag acagggaggg tgaggacaac aagctgtgaa
      361 tacgggaaga gacagaaaat cattgagaac cttgccttta tgaatct
//
LOCUS       KCHQ01000678             220 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 76423cha ultra-conserved
            element locus uce-1160, sequence.
ACCESSION   KCHQ01000678
VERSION     KCHQ01000678.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 220)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 220)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76423cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>220
                     /note="ultra-conserved element locus uce-1160"
BASE COUNT           65 a           41 c           57 g           57 t
ORIGIN      
        1 agaggtgtct cactaatgtc ttggctctgc cgggccaaca tgaccactgc aggtcttcag
       61 gtgattaaca tgttggcagg ggttcctaca tgaaaagtcc cctgtttctt tgtcttctgg
      121 tgtgtaaata ttgtgctagc ggaatatgaa agtagtgcaa ctataaggta caaaaacata
      181 gggaaaaaag atcaagagag ggtctcacat caaggaggac
//
LOCUS       KCHQ01000679             293 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 76519cha ultra-conserved
            element locus uce-840, sequence.
ACCESSION   KCHQ01000679
VERSION     KCHQ01000679.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 293)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 293)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76519cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>293
                     /note="ultra-conserved element locus uce-840"
BASE COUNT           66 a          103 c           45 g           79 t
ORIGIN      
        1 cctcttattc ctccactcct cctcctctcc tcccatcaca acagaccctt ctgcttcctc
       61 tccccagcca ctcctctcct ccacccctcc gttcctccga actggattaa aagtactttt
      121 cattacccgt gcgggagata tggcacttaa aaatcacccc attatcattt ttcacccagc
      181 aaacagcaca cactctcaca gagacataat taccacaccc tgtcatacca gggagatgga
      241 ggctgctgat ttccagccag gccgtgtgtg taactctgtg tgtaagtgtg tgt
//
LOCUS       KCHQ01000680             285 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 76799cha ultra-conserved
            element locus uce-787, sequence.
ACCESSION   KCHQ01000680
VERSION     KCHQ01000680.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 285)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 285)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76799cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>285
                     /note="ultra-conserved element locus uce-787"
BASE COUNT           92 a           62 c           59 g           72 t
ORIGIN      
        1 actgaaagag tgggcctcca ttgaaggatt tcaaaaatag gggcaatttt aatcatctcc
       61 ccattcaatc tcagttggat aaatcatatc tgagagattt gcataaatac aaaccatcaa
      121 agacttttca tcttcaaaga ggttttcaag acccaatagg ctttgtactg taatcatctg
      181 aggtcacaac cctgtgggag caaggctgct atggcaacat aaaaactaac gctgggggct
      241 tagcataata tcccccctcc ttcgcaaaca caggaagggg aggtg
//
LOCUS       KCHQ01000681             855 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 76895cha ultra-conserved
            element locus uce-844, sequence.
ACCESSION   KCHQ01000681
VERSION     KCHQ01000681.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 855)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 855)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76895cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>855
                     /note="ultra-conserved element locus uce-844"
BASE COUNT          261 a          212 c          161 g          221 t
ORIGIN      
        1 cactgtagcc aggtagagct tagtctgaaa aagagaaatg gaagtagaaa gtaatgcatc
       61 aagcagaact aaatgaaaag atgcataaat ggtagaaaaa cccaactcta tcttcaatta
      121 ttgttactac catttgcaat acaaaagaaa agtgtcttct taaaagaggg ctaaaatgat
      181 attggctggt ttaccaccca ctaaatcctt gagtaaaata cagcaaaact tggctctatc
      241 aaatcttccc cttatcatta aagtgcgtgg aatcgagtgg aaagactacc tgaagcaatt
      301 ccccccgtgc ttctatcctc agtttagaaa ttacacggct ctgagccgag actgcagtat
      361 aacatcccta ggacggcgac atacagtaag tctagtataa agtcagtttc acatcagagg
      421 atgggcaaat tacacccaat attagagtgt gagtcaatta atcacgtcct gcacagcaca
      481 gtgtaatgtg tgagtatccc cctgttgaac atgaattaca ggccggctta aagtgtgacg
      541 tggcacatca gtgctaatct gagacatcct ggcaaacctt cgcctccaag tcctccgcag
      601 cctctaagct ggttgagagg gagtcaaatg aaaaaggatc tggcagccca aattaaatgc
      661 agtgctgtca gccacagtca aatccctctt tctccctctt cttctctacc cttcacagac
      721 tctctccctc tctgaatatc cttaaatgtc tccccccctc cttctcccag cctctgagaa
      781 gtgatggatc tgtaactctg actgactctg acgccttgtt aagaacagtc tcttcctgtc
      841 acatccacca gtaaa
//
LOCUS       KCHQ01000682             734 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 76994cha ultra-conserved
            element locus uce-847, sequence.
ACCESSION   KCHQ01000682
VERSION     KCHQ01000682.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="76994cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>734
                     /note="ultra-conserved element locus uce-847"
BASE COUNT          225 a          163 c          141 g          205 t
ORIGIN      
        1 gtcccactcc ctcccaaacc taaaccttcc cagagccgtg gatgcaccac gagatgggca
       61 acacctgtaa aagagcgagt accccctcag cccaggcacc tcgaagcagc ctgcccacct
      121 gctactgagc tctctgggcc ctgcagctta aacgctcatt ttgtgcctct cagcacggga
      181 cttattgata taaatagctg tgcacaaagt gcacactctg ttttctcttg gtctgatgca
      241 gtaggtgtgt atgtgattat attcaatggc agtctctttc aggtgggaat gaaatatgag
      301 cagtttggac actgggtaaa tgacaatctc tgctagattc actgaaaatc attatagcac
      361 aattgacata tatcgaaatg gacaacatga ttctggcacc cgtcttaaac aaggattcaa
      421 tatctaatat gtagacacaa tagactctgt attaaacatt acagatactg cgatagattt
      481 aatgatgacc ttaccatttg tcttgatata gcttgtcctt cctcagtgct gaagcgtaag
      541 gtatgtcctt gaacaagaca ctctatggga ataatgaaaa aggcaaagta taaagtccat
      601 atagtgcaag ccagcgactt cttatcatgt gttaattata actgaatgca taaatagcct
      661 atttatgatc aactcagtga ggtttaattt ttatttgaat cagatacaaa caaacacaat
      721 tgcacagcat gtca
//
LOCUS       KCHQ01000683             395 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 77091cha ultra-conserved
            element locus uce-846, sequence.
ACCESSION   KCHQ01000683
VERSION     KCHQ01000683.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 395)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 395)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77091cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>395
                     /note="ultra-conserved element locus uce-846"
BASE COUNT          132 a           66 c           96 g          101 t
ORIGIN      
        1 agtgtcactc accttgttgc tcctcaaatg ctgcccacag caggtggatg gctggtttct
       61 tgggcagatg gatggtacac gctttcttgt agacatgtct gacaccgtca atgctgtagc
      121 cctctagata ttttgcatac ttcagagtga aaaagagaaa gcgagttgga agaaatgcag
      181 gagagaatag agaaaaagaa aagaggagaa agagaaaggc aagagagaca acacatttta
      241 aacctaaatt ttcagttgac agaaacagtg aatttcttca ttgacaagat cgtttttaga
      301 aattttctgt gtaaacccat cagcaccttc atggaaccaa ttagataagt ttctgtaagg
      361 tagtgggaga cgaagaagat gcaacgtagt agttg
//
LOCUS       KCHQ01000684             804 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 77186cha ultra-conserved
            element locus uce-849, sequence.
ACCESSION   KCHQ01000684
VERSION     KCHQ01000684.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 804)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77186cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>804
                     /note="ultra-conserved element locus uce-849"
BASE COUNT          206 a          205 c          167 g          226 t
ORIGIN      
        1 cccccgagag tgcccggcct gaccccaaaa attgctcaat tgactttttc catctgcagt
       61 tatgtgtggt gatggggaac catgacattt acattcactc cactccaata cgatcccttg
      121 ctcggcgcag gttttcgaca caggctatag ctcgaaacag gtcacaggat caaaagtgtc
      181 tcttgcccgg aggagccact gagtcgatcc tttccatttc tgcaccaaat ggtgttttct
      241 ctctctcttt ctctctcacc agtaacttgc tggaacacat ttagatcctg agtagaactc
      301 ctcagtgccc actcatcact ctgcgtggtg tttgaagatt actacgctca gagacatcct
      361 cactgggcat ccaggcagct tagaggccaa aatccataat cccttaccct tcatgggaat
      421 tctccatgca cttcaacatg ctgaaataca gccccgctgc tgcagccact cacggtcgag
      481 gaactactgc agccggaggc cgagatagat ggatgacatg tctcaatgaa tgtgggagaa
      541 gtggaggaag ttagatttaa aaataagtta tataccgcgg atagtttctg cccagaaatc
      601 taatctagca ggatgttttt ctcgcttggt atttttattt ctgatgtatg cggactactt
      661 cattcagccc acgtgcactg gtaactatct tatgtataca acaacagctt agaggacatt
      721 atttactgaa aatattggta ctttggtgga actcagcagc tgcacagcct ttcttcaagt
      781 cgtctcagta aagaatttcc tcca
//
LOCUS       KCHQ01000685             749 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 77319cha ultra-conserved
            element locus uce-1083, sequence.
ACCESSION   KCHQ01000685
VERSION     KCHQ01000685.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 749)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 749)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77319cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>749
                     /note="ultra-conserved element locus uce-1083"
BASE COUNT          230 a          149 c          215 g          155 t
ORIGIN      
        1 cctctgaaac agaagaaggg atccgataat taagtgtctg ccatgcgctg atgatatcac
       61 gagtgttaat gatcactata atgacagttc atgctgcacc cagttgattt acaatacacc
      121 tactgtgaag caccactgcg acaaacactg cagcaaagac acccaagcga aaatagttta
      181 gtataaagta aaaagccata agttagacct aataggcact tttagggaaa ggaattaaat
      241 gcttacttgc acaataaaat atctgcaggt agataacttt gagatgcagc gttgttggtg
      301 tacttgctgg cagacagccc tctaagttgt ttggtctctc cctccctgtt taggcgaaca
      361 cattgttgat tcagacccat catgttgagg cttgaggtca ccctgtctca ggcttggcta
      421 gttagcagca gcccacctga tggcccagag gaaatcacag cagccgcact cacaggagag
      481 ggcctgacag ccaggccccg caccagagag aggggtccag ccaggggggt ggagagagga
      541 gggtcagcat gggggaggga ggagagaaag ggagagggtt ctggaaagaa gggggggtcc
      601 ttcaaacata gcgagggatg agagacggct aaagagggcg caatggtgag tcgtgttgtg
      661 atcgctgctg cattaagaga gaaagactgg tgaagaaaat gccctcaatg atgaaagaaa
      721 gatgtaagag gagaaacagg gctgataaa
//
LOCUS       KCHQ01000686             458 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 77488cha ultra-conserved
            element locus uce-1038, sequence.
ACCESSION   KCHQ01000686
VERSION     KCHQ01000686.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 458)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 458)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77488cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>458
                     /note="ultra-conserved element locus uce-1038"
BASE COUNT          156 a          105 c          112 g           85 t
ORIGIN      
        1 catgtaggcg gggggataga gacagaaaga cagagagcgg gtcggtgctt aaagctaaca
       61 ggtaaccttt ctgtgcacct aggacaaagg cagggggaaa aagaaaatgt caaattaaga
      121 gaggccaggc agagagacgt ggctgccata tttgtgtgaa agcccagtgc tgttggcagc
      181 agagatggct gctttctgat tcatctgggg ccgtatggca aagctttgtc agtctgtgcg
      241 aggtataaat aattcagggt gagagatggc aattacaggg ccctgcacaa ccaaaatgaa
      301 tattttataa ggactaaaac tgccctggaa tgaatcacac acatggagtc acacacacat
      361 acacacacac ccccccacac acacataagt ataagtgaat gtgtgcacac atacacacgc
      421 aagcacacac atactcaaac acacacacac acacacac
//
LOCUS       KCHQ01000687             263 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 77576cha ultra-conserved
            element locus uce-1039, sequence.
ACCESSION   KCHQ01000687
VERSION     KCHQ01000687.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 263)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 263)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77576cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>263
                     /note="ultra-conserved element locus uce-1039"
BASE COUNT           61 a           49 c           85 g           68 t
ORIGIN      
        1 gcgtgcgtgc gtgcgtgtgt gtgtatctgc gtgtgtaatt acggcgagga gtgatgcatg
       61 cctggcctgt ccctccctct cggcttagaa cagcgtgtca gagagaatat gcaggattta
      121 attatagacg aattaaaatt ggtaatgaaa ttgggcatga acaaactaca aatagcagat
      181 gaaaagggag gcctgtccct gggggggtga gacgaagata gccgtgtgcc tgcctgcttg
      241 cggtgccttt ggatgtgtgt gtc
//
LOCUS       KCHQ01000688             315 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 77667cha ultra-conserved
            element locus uce-1133, sequence.
ACCESSION   KCHQ01000688
VERSION     KCHQ01000688.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77667cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>315
                     /note="ultra-conserved element locus uce-1133"
BASE COUNT           79 a           79 c           83 g           74 t
ORIGIN      
        1 gcccacatag aacacacaca ctgggacggg ttagccctcc tccactccgg cacctgctcc
       61 gctgaaggtg aaagaagtgc tcacttgagc tcattgaaaa gtagatgtga cagtaaattt
      121 ttcaggccct tgtgagatgg gagatcttgt tatagcagtc aggatggggg tcagggcagt
      181 ggctgcttga tgattgagga aaagagaagt aaattcattc tgcttcgggc actttgtcaa
      241 gtgccagtag cttactgttg agagccactc acccatcacc gtgttacggc cccagaggtc
      301 acctccaccg ccata
//
LOCUS       KCHQ01000689             558 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 77850cha ultra-conserved
            element locus uce-1135, sequence.
ACCESSION   KCHQ01000689
VERSION     KCHQ01000689.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 558)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77850cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>558
                     /note="ultra-conserved element locus uce-1135"
BASE COUNT          198 a           94 c          137 g          129 t
ORIGIN      
        1 tttttttttt gacattaaca tttcggatta gccaggcaga ccaaggtaac atgcgagcag
       61 gagaaggaaa cggtatcatc acagagatca taaaatggtg tcgtgagtag tcttttgtcc
      121 gggaccatag gagagttctg ttgctaaagg gaaggacaaa agcagaaggc gccacgggta
      181 taaggttccc ctgagcaaca atgctgaaag tttcaacttg cagcacatgg gtgtaacttt
      241 aactggaata ctgtggatca aagagtcaca aacaaagtgg gtggaaatgc tggaggagtg
      301 tctgtgctca agtgaaggac aggttcacta gagagaaagc gggagagacc atttatgaaa
      361 cacagaccag gcaatcaagg ctaattactg aaactgtgtt ttgtgaactc aaagggcaac
      421 atgattcaat caacaaaaca gatgtatatt ataattttca ctcaatttga aaaataaaat
      481 gaccttccat acgaaacatg cgggacgaca agcttaaacg agagacgaga aaatcagaac
      541 gtaattgaat ttaacagg
//
LOCUS       KCHQ01000690             404 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 77948cha ultra-conserved
            element locus uce-1134, sequence.
ACCESSION   KCHQ01000690
VERSION     KCHQ01000690.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 404)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="77948cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>404
                     /note="ultra-conserved element locus uce-1134"
BASE COUNT          119 a           72 c          101 g          112 t
ORIGIN      
        1 cttgatgagc cgcaatggat ggcagcagtg ttagaaagca cagtgggtgt caatataaag
       61 tgacggccat atttgccggt gccgctgttg taaacaaaaa gtgagagaca gacgcttcac
      121 tgaatttcgg gtcattttta tttctttaat ttacaatgtc tttgggaatg tcttataaac
      181 ccaatgtcca tcagcacatt ccgggaactt ctgggaacca gggtaaggag aaaaaacggg
      241 gggaaatcaa agtatccgtc cgttaaatcg agtgttaaat tcggggtctc ggagaatacc
      301 tggagaaaga ccgtgtctgt agtttttgtc cagttatata tatagggtca gatcctggga
      361 gctaggctaa ttcatatccg ccattattac taatgtaaaa gagc
//
LOCUS       KCHQ01000691             427 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 78039cha ultra-conserved
            element locus uce-634, sequence.
ACCESSION   KCHQ01000691
VERSION     KCHQ01000691.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 427)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 427)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78039cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>427
                     /note="ultra-conserved element locus uce-634"
BASE COUNT          180 a           77 c           63 g          107 t
ORIGIN      
        1 ttcaaagcta ttgaaatgac actaaacttt aggattcatg aatatacaaa caaatgagaa
       61 ctagtacatc tttgtaaata ttaaccaata ctgccggcag tctatacgtc taataaaaat
      121 gttacttgcc ctcaggaaca gtataatccc ttaaaaaata gacaactcaa atgataagac
      181 attaaatgaa aaatacagca cctataaata agcagaataa aaaccaaact ataaatgcaa
      241 aatagcaata aaaccaagct acagtaaatc atagtattac actactttgt gagaagatta
      301 atgtaatggt aatgcatcaa acagcttaaa gaagggtgtc agttgtgcac tagtagtgtg
      361 tgcaagtaga tacgaaatat gacccaactc attggaaaca ctgaacactc ctcagtcgca
      421 cacactt
//
LOCUS       KCHQ01000692             409 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 78131cha ultra-conserved
            element locus uce-1136, sequence.
ACCESSION   KCHQ01000692
VERSION     KCHQ01000692.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 409)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 409)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78131cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>409
                     /note="ultra-conserved element locus uce-1136"
BASE COUNT          114 a           97 c           89 g          109 t
ORIGIN      
        1 caaatgaaga atttgggagc cagaacaatg gaaagaatta ggcactttaa aatgtttgca
       61 taacgagctc cttctcgccg caatggttct cttcttttta atcacctgcg ctctccagac
      121 cacctacacc cttcttcatg atcagataca ggaccgacgg gctgatgtat gatccgatga
      181 attaatctgc tgaggctgat tgccattgct gccatgcgat tatgcacctt gattactgag
      241 cccaccccaa ggaccatgac gtgccccggt gcacatttta aaggtgcgca taaaattacg
      301 tggtgattac cccacaatag atcaatccac gagtgaatga gactgtgtgg ccatatagac
      361 cgtctcaagt aggactgtga ttattaatag gtacttgagg tgacctaat
//
LOCUS       KCHQ01000693             496 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 78217cha ultra-conserved
            element locus uce-1030, sequence.
ACCESSION   KCHQ01000693
VERSION     KCHQ01000693.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 496)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78217cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>496
                     /note="ultra-conserved element locus uce-1030"
BASE COUNT          159 a          125 c          110 g          102 t
ORIGIN      
        1 ctgatggagg gcgtttttct aaaggctttt ccccaacctt ccctgggaat aataagagag
       61 gtcagaaagt tgggtgactt cctgctgcag aaggcagggt cacagcgctg gttggcagaa
      121 gtagtcagca ctcagcggac atgacttgga acacacacac acaagcaaaa acacacagtg
      181 aagggacggc aacccatagt gcagaactgg tgtgatttac acacaccaag agcagaagct
      241 ggaaataatt cagtaaatat aatgaatgaa ggcgctacag tgattatcag cctgtttcca
      301 acgctgacct ctacccatac gcagatacgc acagatttat ggccgcaaac atccactgat
      361 atgcacatac acacacaaac actcgcgcat acacatccat aaataggcaa ctgatttaca
      421 aatgagctga cctgtgtgtt ggccttgctc tcagataggc tcacaccccc accaggatgc
      481 ataaatcaca atggac
//
LOCUS       KCHQ01000694             303 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 78408cha ultra-conserved
            element locus uce-638, sequence.
ACCESSION   KCHQ01000694
VERSION     KCHQ01000694.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 303)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 303)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78408cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>303
                     /note="ultra-conserved element locus uce-638"
BASE COUNT           61 a           81 c           93 g           68 t
ORIGIN      
        1 cctgagtatg atttgatcct ggaaggctca attaagtggt tcgtttaccc ctcgtgtgga
       61 gctggtgaat tggagccagg tcagctccgg gttgaggtgt tgttcattat ttttccgcct
      121 gtcggatccc atgagcggcc gctggagacg gtggctgctc ggcggccgag gagcaaaggg
      181 cctgccggtg gggtacgtca aacacactca aagcctctcc ccttgcctgg gggattatga
      241 tcaacaaagc atgtcccaca cctgcaccgg ccagcacaat ggaaactccg cgggccaatg
      301 gag
//
LOCUS       KCHQ01000695             715 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 78591cha ultra-conserved
            element locus uce-1034, sequence.
ACCESSION   KCHQ01000695
VERSION     KCHQ01000695.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 715)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 715)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78591cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>715
                     /note="ultra-conserved element locus uce-1034"
BASE COUNT          222 a          137 c          119 g          237 t
ORIGIN      
        1 caagtttagg tgtatgctaa tatgagcgcg tcacccagag ggaaagagaa caagatcttc
       61 actttacgat tgctcttcgt ctttgacaca ttataactga cactggctgc gccgaggata
      121 tccattatcc agtttataaa atggcttttt cccggtctcc agaatgtctt tcaaaacagt
      181 gaaaccaaaa atgtggtcac gccacacctt ccctgtgtct tcatttcttc gtccctcacc
      241 ctgtcctcca tttctgcctg tttctgtctg actctctgtg tgtgaccttg tgtttcttct
      301 gtgttagtgt gtggaaattg ggcacaccta actacagggg cttaagtata atcatgtatt
      361 tagctgcaga aatgtactga cgcactgttc ctccctggaa aaagagaact acgagcatta
      421 attgggggat attactgttg agatcaattt ccatgttttt acagcgatat tcattccctc
      481 agacctgaac aaatatttat gtctggttga aaaaaaagag aaaatgacag tatgcgagaa
      541 aaaaaaaaaa aatcaatatc aaaactattc catcattttc agatttttaa aatacttgtt
      601 tctgagataa ctgtgcaatt tttattacat attctgtaat taaaaaagag taattttatc
      661 cttttttttt aaattaattt atttaaaaga attagaacat aataaaaaca acatc
//
LOCUS       KCHQ01000696             220 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 78682cha ultra-conserved
            element locus uce-1035, sequence.
ACCESSION   KCHQ01000696
VERSION     KCHQ01000696.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 220)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 220)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78682cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>220
                     /note="ultra-conserved element locus uce-1035"
BASE COUNT           56 a           57 c           36 g           71 t
ORIGIN      
        1 gacacatcta gtccctcttt ctctttatgg taccaactag aatgtaccgt gggtaatccc
       61 aataaggctc tttacttgca aattcaagta tatgcacaca tgtaccgata agacgctccc
      121 acgcagcttt ctcacatacg tgttattgac aagctcatca catccattca gctctctgtg
      181 cttttgtccc gatctgaagt aatatctttg acttgttagg
//
LOCUS       KCHQ01000697             267 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 78773cha ultra-conserved
            element locus uce-1036, sequence.
ACCESSION   KCHQ01000697
VERSION     KCHQ01000697.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 267)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 267)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78773cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>267
                     /note="ultra-conserved element locus uce-1036"
BASE COUNT           74 a           60 c           74 g           59 t
ORIGIN      
        1 acgttaactt gagttagcat tagctggagg cctcagagtt agcatacaca tgtcaacctg
       61 gtaaataacg ctcactgtcg tctgtttcag tacacgatgg gacgtgtgat caggggacag
      121 agaaaaggtg cgggctccgt gttcaaagcc cacgtcaagc acaggaaagg tgccgctaga
      181 ctccgtcacg ttgacttcgc tgaacgccat ggttacatca aggggattgt gaaggtaaat
      241 gaagactgtg ccattgagag cacacca
//
LOCUS       KCHQ01000698             369 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 78866cha ultra-conserved
            element locus uce-1037, sequence.
ACCESSION   KCHQ01000698
VERSION     KCHQ01000698.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 369)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 369)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78866cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>369
                     /note="ultra-conserved element locus uce-1037"
BASE COUNT          108 a           67 c           85 g          109 t
ORIGIN      
        1 ctaatcttcc gtctctctga aaataacttt ttgtgctgta tgaagattgg attttacaga
       61 tcacaacggc aaggcaatgc attcactcag ctgtacttct catgagaaac gtatcgtgat
      121 ctctaataat attctgtata tggcttcagc caagcgctac ttttaaatgc gatgccgtat
      181 taatattaat atttatggac tgtggaggag cgcaagccat ctgaggggta cgggcagaac
      241 aaacttccat taattcctat ggaggggaaa gtccaaatta attcctattc acattttaat
      301 gcctttatgc taatgcaggt tcagagggaa aggatggtga acccacagga ggaggggggg
      361 ttaaagttg
//
LOCUS       KCHQ01000699             307 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 78940cha ultra-conserved
            element locus uce-1001, sequence.
ACCESSION   KCHQ01000699
VERSION     KCHQ01000699.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 307)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 307)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="78940cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>307
                     /note="ultra-conserved element locus uce-1001"
BASE COUNT           73 a           69 c           72 g           93 t
ORIGIN      
        1 gttccagtca cgcccgcttc ccggctcgcg gccaatcaat accactttcc tgttttagag
       61 gcgggtaatt atgaggtgga gagattgtgt gacctctcac ccctgctgca ttactcgcct
      121 gatattaaga taaattgcct gattttgggt aaacatatgc tgcaattcaa actgtcagca
      181 ctggtttgct cagggataat ttgtattgat ctcctggctt cttccccatt ttgcttactg
      241 acctcatgga taattagaga aaaagagaca cggggaggta aggcagggct tgcatttgaa
      301 tactttg
//
LOCUS       KCHQ01000700             795 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 79030cha ultra-conserved
            element locus uce-739, sequence.
ACCESSION   KCHQ01000700
VERSION     KCHQ01000700.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 795)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 795)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79030cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>795
                     /note="ultra-conserved element locus uce-739"
BASE COUNT          188 a          197 c          177 g          233 t
ORIGIN      
        1 tatttaatcg ggatgagcta attacattca aacacaatta ggtcaagtag ctctagacca
       61 ctgctcccac tttggctgag acctgcatgc atttacagca tacacacatc ttccttgaaa
      121 ccagcattcg gatagaaaag aatgaaagat gccctgcccc caccccaaaa atctgatcct
      181 caactatttt tttcctgcca ttgctgttgt gcacttccct ccgccggcca ccggtggtga
      241 tgtgggatgg tgttcatgtc ctctccatgg gtgcttgatt cttcctctcc tcctgacagc
      301 caactactga ggttgaggtg aagaagaagc tgtcgggctc cctgatggtg tctgtggacc
      361 agctcaatac ctcctttggg cggaaagagc gggccaacag tgtcatgagc gtcattacca
      421 acacactagt ggagggtact gccactttaa cccagctatt taacctgctc tctcattatt
      481 ctttaactag ggctgctctc attggttgat tagtttgaca tgaatttcct gcttatctgc
      541 tttgcatatc cagcagtacc agatacatac agtgcataca atttctgtct atgatttgat
      601 accattgcat gcggtatgct caagcacgca agtatgtttg attgtgatgt gtgatccgcg
      661 ctatgtcttc agagctggag gagtctcagc gcaagtgtcc gccatgctgg tataagtttt
      721 ctaacacatt cctgatctgg gagtgctccc ccacgtggat taagatcaag gagattgtga
      781 acctgattgt catgg
//
LOCUS       KCHQ01000701             315 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 79130cha ultra-conserved
            element locus uce-738, sequence.
ACCESSION   KCHQ01000701
VERSION     KCHQ01000701.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79130cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>315
                     /note="ultra-conserved element locus uce-738"
BASE COUNT           97 a           58 c           67 g           93 t
ORIGIN      
        1 accatctctg ccgtctcttt ctgtctttct gggaagctcc aggccgagaa tagagctcag
       61 agatctgcgg tttacataaa ccacaatacc ttctcagctt ggaggggggg aagaaagaca
      121 caagcatctg tttttgtttg cattttattc caaaacataa aattgaatca atcttttaat
      181 actctggatt gtataaacat gggagagaag tgcttgaata aatatcaaga atgaaaatgg
      241 atttctcgtc gacgactatt atctatgtgg tttatttatg agtaccacgg ctggtgccaa
      301 aagaggcaag acata
//
LOCUS       KCHQ01000702             424 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 79270cha ultra-conserved
            element locus uce-703, sequence.
ACCESSION   KCHQ01000702
VERSION     KCHQ01000702.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 424)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 424)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79270cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>424
                     /note="ultra-conserved element locus uce-703"
BASE COUNT          125 a           87 c           77 g          135 t
ORIGIN      
        1 cgtctttcac acaacaatac ccagcaaact tgtcagaaat gctgataaga gggccgatcc
       61 tgagcgctta cacggcatta atcaaatagc aggtctaatt aaaagcgctt taaacaaagc
      121 tttttttcta aatgttgctc aggtatggca ataatttttg atcagccaag cctggaagac
      181 aaataattag aactgccaca gcggcctgat gagtgatgtc agcatctccg agtgaccttc
      241 ccctgctaat taattttcat tccagggaaa aaagaccccg ttgttgcaca ttattaattg
      301 agttcatgaa aagatgcacc tgattaattt ttgttgataa tacttgtcat tctggccgcc
      361 gttcgtaatc attttatgag ttttcatctt agtgtttttc aaagttgatc taagtcatct
      421 ttac
//
LOCUS       KCHQ01000703             356 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 79342cha ultra-conserved
            element locus uce-732, sequence.
ACCESSION   KCHQ01000703
VERSION     KCHQ01000703.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 356)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 356)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79342cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>356
                     /note="ultra-conserved element locus uce-732"
BASE COUNT          108 a           85 c           64 g           99 t
ORIGIN      
        1 agtttccctg ctatgtgcgc ccgaggactc tcagggataa atgagccatc tgtgtaggag
       61 cctttaaagc tgagctgaga aattacagtc atcccatttc acctcatcaa ccgttgaggt
      121 gttattttcc tctaggcaag cttgtattta tataccaccc cagccactga acttatgcct
      181 ccccactttt cactcctact ggaggaaaac aaaaaagaaa tatcctggca aaaacatgat
      241 gcaccatttt atttatctca ggacgcaaca gcttgaaatg aaaactaaat ctgaaattaa
      301 tgaagcccaa tctcactgtg gcattctcct ctgtggtaat aaatgagttg gatcaa
//
LOCUS       KCHQ01000704             539 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 79437cha ultra-conserved
            element locus uce-731, sequence.
ACCESSION   KCHQ01000704
VERSION     KCHQ01000704.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 539)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 539)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79437cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>539
                     /note="ultra-conserved element locus uce-731"
BASE COUNT          170 a          160 c           87 g          122 t
ORIGIN      
        1 gtttcctaca tacacacaca gggacacaca cggacacaga ctgacacaca caaatttgtg
       61 cacacaaacc acaaacacac acacagtgtt ccctactcag agcattacag cctttcctcc
      121 ttttacactt atctgtactc atgtgtctgc aacgggcgag cctaagttac caaactcgca
      181 aattgccctg ctgtcacgca ggtccccttt aagcatgcct tttagcctcc taaaggacaa
      241 ataaagtcca tttaataact gcactaaaca ctaatagtct atgtgtggtt gacatttgtg
      301 tttggactaa aagcccccct caggccactg gtggtacaga ggcaggggcg cgcagctccc
      361 ctctgtagca ctaacaggtc tgccacagct gaaagcacaa gacaacagct cttaagacac
      421 tctctcacac actgagctat tgatccatct aaaagaacac acagtggacg ccacttgcca
      481 ctctactttc aaaacacatt tctctctctc actctcaaaa aaaaaaaaaa aagacccaa
//
LOCUS       KCHQ01000705             498 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 79622cha ultra-conserved
            element locus uce-737, sequence.
ACCESSION   KCHQ01000705
VERSION     KCHQ01000705.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 498)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79622cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>498
                     /note="ultra-conserved element locus uce-737"
BASE COUNT          150 a          100 c          141 g          107 t
ORIGIN      
        1 cagatagaag ccccaaaaaa ttatgcgcag gctaggagga gaaagtggct cacttctgtt
       61 tgctaaatta atcgcttcct aaatggctcc aggccaggca aagttaacat ttgcagtttc
      121 aaaggttttc agcgcttgca atgagccatg aaattactgc atgccgtcga aaatggcagc
      181 tgatgaaaag cccaaggagc aggtcccaca ggcagagaga gcttggaagt gaaatcttaa
      241 acacaaagtc ttatttctga ttcggatcat ggtgaaattc agaaccagaa tgtacaaacc
      301 catgtccgaa agcgggacag gttgtgagaa gacagatgac gaacagctgt ttgcggcctg
      361 gcagccccgt ccaggctccg aggaggcgag gtgagcgcag aggttgggta gaaggagcgt
      421 aatgatgatg ttgaggtgct cagctgcagc cagaatggac tgacccaaat taggtttgat
      481 taaatcacag gggtgatg
//
LOCUS       KCHQ01000706             556 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 79808cha ultra-conserved
            element locus uce-735, sequence.
ACCESSION   KCHQ01000706
VERSION     KCHQ01000706.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 556)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 556)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79808cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>556
                     /note="ultra-conserved element locus uce-735"
BASE COUNT          153 a          115 c          107 g          181 t
ORIGIN      
        1 atttcttcca cttacttttt catatgaccc accaacatat gtttttttac ccatacccat
       61 atctgcaagt tatatactaa tggaatattt ttcctacttt gttgcatttt ttcaggacgg
      121 atgatgtgac tgatggttag atatgaattc agatttactt ttctgtaaac ctacctgcaa
      181 atcaggtagg ccgtgttata attacatctt tattttactg tatttatagc agtatcagtg
      241 taactacagt ataaaagcat gcctaaggac aacagggcta atgtttagtg ctccctgaga
      301 ctgtgcagat agagacacat ggtcctatat gtccactgca gcctctttgt cagtcatctt
      361 tcatctgttg gcctgtgcct ataggcagag agtgagcagc aggcggtgta attctgttct
      421 aaagccccta gttaggcatg catatattcc tattatagtc agtgctcccg gaacaagaca
      481 acagagagca aacagaatga ccttgaaata tttatcccca accacgcttc ggagaattaa
      541 gtttggtgtc aggggc
//
LOCUS       KCHQ01000707             817 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 79897cha ultra-conserved
            element locus uce-734, sequence.
ACCESSION   KCHQ01000707
VERSION     KCHQ01000707.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 817)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 817)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79897cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>817
                     /note="ultra-conserved element locus uce-734"
BASE COUNT          198 a          194 c          147 g          278 t
ORIGIN      
        1 atgactgaac ttgaaatcac cataaaaata attcatttca gcctccctcc caaaaaaacc
       61 ccacatttta aaaaacatca gatcttgaat ttaattttaa atccagatca aatctttgca
      121 ttcagtaaaa ttagctttca aactttgagc tcttcctttg aatacgcgtt ttcctgcctg
      181 ataagcatcg ccctcagctt ttggatttct cttaatcgtt ccctgaaagg cagatttttt
      241 tttttcctcc cctctccgca ggtctgggtg gcagcatatc tcaactcgat tcactgtgac
      301 aatattgttt ggctatcatt cgctgcttta ggatgaatgg catcgatcct cttttaacaa
      361 catttgtttc ctattgtgtt cgggggcgca gcagaggagg gcagacgtgt gaaagtggct
      421 gtttgattct ctttttcatc cccatgacct cagcttttgt gtctcgtcac cctgggaatg
      481 tcacgcctca ctactctact ttaagatgtt tcagaaagtg ccctttgttt tcgctcctct
      541 ttttcttttt ttctttctct ttttctttaa agctcacaca aaattgttct tggtctcccc
      601 tcctgctata aaggatactt caggctgagg cacggttcac aagtgcaatg caatttggct
      661 tatcccaacc tttgttcggg cttctacaaa tgaccaaaca tagtgcagac ttgatctact
      721 gctgcttgaa ctcaggagtt tgggagcagc taaaaacccc attcagattc agagtcatgg
      781 tggtattttc agtgtgtgca ttcgacaggg acaaaag
//
LOCUS       KCHQ01000708             740 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 79991cha ultra-conserved
            element locus uce-287, sequence.
ACCESSION   KCHQ01000708
VERSION     KCHQ01000708.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 740)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 740)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="79991cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>740
                     /note="ultra-conserved element locus uce-287"
BASE COUNT          219 a          126 c          213 g          182 t
ORIGIN      
        1 tttctgtaca ctgtatattt actggcttgt acatacagta atgtgaactg tgagaaaact
       61 ccacttgagc tctaaggcat tgttattgcc accatttcca gcagagtatg agatatgtgc
      121 tgcctatctc cttgggacat ttgctaccag aggcaggttt gaaatagatt taagagctac
      181 aaaaaaatga aagaggacaa aaaaaaaggg aaaaggatat ggattgagat ggagaagtag
      241 caggctgatt acaaggtgtc aaaattgcca ggagcaagaa ggtgaaagca atcaggggtg
      301 agaagagtgc agcattcgtg aggggcaact aattatccat ctcatttgtg gagagaggca
      361 tttgaggcag ctctagccca ctgaatggtg acagattggt gcggaggaga ggggaggtgt
      421 tagaacaatg gagcccagct caccatcatt actgcatgct aatcagcagt gcttctgcac
      481 caccagtcgg tgctgagttc ggggagacag ggaagtcact ggcttcaggg gaccacggtc
      541 gttttcaagt agaggagaga gggagggagc tgacggacag tatagctgtt ggcactctgc
      601 caggtttatt tgagcttata ggttatccta tgcagagaag agccgatgag acatgagctg
      661 atggagtgtt tttaagtgca ctgagtggaa taatggtgta atacagtata tgcatgttca
      721 cacagtctga gctgacattc
//
LOCUS       KCHQ01000709             257 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 80085cha ultra-conserved
            element locus uce-286, sequence.
ACCESSION   KCHQ01000709
VERSION     KCHQ01000709.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 257)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 257)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80085cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>257
                     /note="ultra-conserved element locus uce-286"
BASE COUNT           77 a           59 c           57 g           64 t
ORIGIN      
        1 gtataatttg ctaggaaaca ttttaccgaa catttggtga taaaaacgcc ggcgtcggcc
       61 ccgaggctta aagcaattaa ttcaggatcc tgacataaac tctccaatcc tttgacagct
      121 tggagctgaa ataaaaatgc tagttctcct gggaacagca ggagatagct ggctcttttc
      181 tggactgttt gctcactggc cctgagagca atcttcccca gtcagaatga aatgcaagga
      241 cacaaacaat gtaccgg
//
LOCUS       KCHQ01000710             384 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 80257cha ultra-conserved
            element locus uce-701, sequence.
ACCESSION   KCHQ01000710
VERSION     KCHQ01000710.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80257cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>384
                     /note="ultra-conserved element locus uce-701"
BASE COUNT           92 a           81 c           96 g          115 t
ORIGIN      
        1 agtggagtgt tgggtgtgtt tggtgaaatg tatggagagt gtgagaggtt ttttgtgcgt
       61 gtgagcatat ttttattttg gcctgactaa tccgcatgcc tctcgctggt tcctgtccta
      121 acagggggtg tcatttgatc aagtcaataa tctgctgatt gaacctgctc gaattgagga
      181 ggaagaggtc tgtacatact ctttcccgtc cgatctgtct ctctatgttc ttcactcacc
      241 ccctcattca cccatctgta ttcagaggta tagaaaatac ccacagaaaa tccatggtta
      301 aaccaagcca atcaataggg accccctaac cactgctcat ttgtaagatg gccagtgtgg
      361 cagaagctgg atgtgggaat gagg
//
LOCUS       KCHQ01000711             697 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 80350cha ultra-conserved
            element locus uce-283, sequence.
ACCESSION   KCHQ01000711
VERSION     KCHQ01000711.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 697)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 697)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80350cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>697
                     /note="ultra-conserved element locus uce-283"
BASE COUNT          213 a          135 c          154 g          195 t
ORIGIN      
        1 atttgcagag atttgatgtg accctcgacc actgttgtag gtggccttga cattagagtc
       61 aaaatgagaa ctttaaataa ccattaccac tcagatcagc tgggtttttt tctccttctt
      121 cttctttttt tcacagcaag cactttggaa tagatgtaat gctcatatag tacgacacaa
      181 gagagagaaa aaacaggaat acaagggtct ctcagttaat gtatcatcat ctgagtgggt
      241 ttggattgga gttattagag tatttcactt cattgcatga cctcctgttc ctcctcagat
      301 catgaatcct attcattacc cagtccttct ggagtgcccg cctttataat attactcaat
      361 ttatattctg aagcgggctc ctgggagagc gatcagcgct ccgaaacagc gaccccccta
      421 taacccaatc acaatattta aagggcagca aagagctttt taatgcgcgt cgtagataac
      481 catttaaagt ggattgcttt ggtttaatat gaccttaaca ggctggcagt cacatgtgaa
      541 gaatgaataa gttaatagga gagacgacag ggagaaagaa tgaaatcaaa aagcagaata
      601 tgagagattt gtttcaatgc aagctggcct cttgacggct gctgagagga gcatgataga
      661 gaatcacaag cgtgtgaatg aaacaggaca ggcgatg
//
LOCUS       KCHQ01000712             667 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 80438cha ultra-conserved
            element locus uce-282, sequence.
ACCESSION   KCHQ01000712
VERSION     KCHQ01000712.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 667)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 667)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80438cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>667
                     /note="ultra-conserved element locus uce-282"
BASE COUNT          156 a          200 c          139 g          172 t
ORIGIN      
        1 aagaggagat tagagtggag gtgtgagctt gcagtaagat tacattttcc ctctttttaa
       61 tggataagtg cttctctttt ttttcctgtt tcactcccac tattctgctt ctgtttcaca
      121 gtgttccatc tctctctgtg ccctccgtca ccacacacac acacataaca cacacaggca
      181 taaaaaagcg cacacatgca cgtacgcgtg caaatatgca tgcgcacaca caccaaacac
      241 acacatctct cctctctccc tctgtcaccc tctccctccg tcctccctca cttgatcctt
      301 acacctacgt gctacagatg gtttcatttt ataagagata aaaccacatt tggtggaact
      361 gattaaacag agggaacaac atccccatct gccatttatt ccaatctgaa attgcttggg
      421 cagatgctga catctttgga gatgattgat tcaccccgtc tggccagaga ggagtggaga
      481 ggagagcgga gctggatcct ccccggggct gcagcttcct gccgcccggc catggcaccg
      541 cacagtgtca cttcagtggt gatggagccc ccggcccccc tcagtacccc gtctcttgtc
      601 tccagcaagc tgctgcaatc agcacaggcc ctgattggac ttgggcaggt gagcgcaata
      661 cgcttta
//
LOCUS       KCHQ01000713             640 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 80532cha ultra-conserved
            element locus uce-280, sequence.
ACCESSION   KCHQ01000713
VERSION     KCHQ01000713.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 640)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80532cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>640
                     /note="ultra-conserved element locus uce-280"
BASE COUNT          238 a           99 c          160 g          143 t
ORIGIN      
        1 cgcatgtgtg gatctttatt tcaaggtgaa agagaagtca aacactcgaa caacttatag
       61 atcaaatcag aaatatattg actggtgagg tttgaaaaaa aaaagcaaca acaaagtcaa
      121 taaataaagt cattaccaga gcttagaaca gaggcgcccg attttctctt ttatcccgca
      181 acaacaaaaa gaagaagaag acagaggagg aagaaataac aaaaaaagga gaaagaattg
      241 cacagaggct tttcttttct ttaaaatgct gcattaggtc ttttcctgca gtcagttttc
      301 atagttcaaa gctggcagtt caataaatag ctggaactgg cacatctctg ttcttgcaaa
      361 aagaaatcaa tgttaatcct attaccggca gttatcacct agcccagaaa cggtggcaag
      421 taagggaaaa aaaaaagaaa aaaaaactga gatgtcaaag cgggaagggg agagcgagcg
      481 agagaaaggg agagagagag agcgagtcac ccttcattca ctttcaaaca cagttttgat
      541 aatttacttc tgtagaagaa gaagaagaag aagaagggtg gcggggggat gggaggaggg
      601 gagtcagctt cagttactgg gagatgtgtg tgtgcgtgtg
//
LOCUS       KCHQ01000714             247 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 80616cha ultra-conserved
            element locus uce-1005, sequence.
ACCESSION   KCHQ01000714
VERSION     KCHQ01000714.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 247)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 247)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80616cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>247
                     /note="ultra-conserved element locus uce-1005"
BASE COUNT           70 a           53 c           54 g           70 t
ORIGIN      
        1 gctgagccgt gagaagaatg gggggaagga gggctgctcc tttaaatgga atctttaatt
       61 tcacaggcct cttgatatcc cgccgcagtt gcgattgtgt aacagaaaag aggaatcaag
      121 gcttttgaaa gcacattaag cagaaagcaa ttaaccaaca cacagtagtt aatttttgta
      181 ttaatacttc aacagctggt gcagattgct tcctcatttt tatctccgct ccagctgttc
      241 ttccacc
//
LOCUS       KCHQ01000715             525 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 80712cha ultra-conserved
            element locus uce-985, sequence.
ACCESSION   KCHQ01000715
VERSION     KCHQ01000715.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 525)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 525)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80712cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>525
                     /note="ultra-conserved element locus uce-985"
BASE COUNT          104 a          122 c          126 g          173 t
ORIGIN      
        1 ctgtgcaatc gtgtgtgagt gtttatggct gcaatgtttt caatatgcct ctattcatgt
       61 gaaggctgtc cagtgtcctt ggacctccaa cagaggtcag ctatcacagg tctctcttcc
      121 ttttttctcc cctccctcac ctttcctctc tctctctctc tttttctctg gctgtctcat
      181 tcaaaggcct gcggtcaccc tgcaaccatg gcaaataact gccgtcgcct ttgtaggtcg
      241 ggcgaattac acaacgtgtc atgttggtcg tgtagcaggt agcagggccc gtgggagatt
      301 tagtggcttt aattacattt ctcttgctgg ccgttgagga gaaaggaatt aaatgggact
      361 gttttcttaa tcagctcgcg ctcggtgggt aaccacccta gctttccaaa tgaaaaagtg
      421 cattgaagcg taaactctat gctgcatcca gtgatgctta cgtggtaaac aatggcttga
      481 gtgtttatgt gtgtgcagtt gtacgcagtg tgtttttgag ttttg
//
LOCUS       KCHQ01000716             590 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 80930cha ultra-conserved
            element locus uce-1193, sequence.
ACCESSION   KCHQ01000716
VERSION     KCHQ01000716.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 590)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="80930cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>590
                     /note="ultra-conserved element locus uce-1193"
BASE COUNT          170 a          122 c          124 g          174 t
ORIGIN      
        1 tttagatatt gttaagtggc tttgaatagc tcccttgatt tcacagttcc aaatgacccg
       61 cgataatcag gtcattaaaa tgagcccatt ctccacatct gacacacttc cactcccgcc
      121 tcatctgaat aacaaatcag ctctggagtg ctttctcaaa cagaaagaaa aaaaaggaaa
      181 gagagaaaac tgactttctc tttattttca ggttaacctt atctctatat tcaggagtaa
      241 agatggtaag taagctagag gggggaaaag gtcctgtcaa aagtgccagt gcctgtgtga
      301 aagtacccgg ttttcttaat tcatccctta ggaccggata agtctatcaa tctgttaaat
      361 tggaaagcca ttaggtgccc tggtttatgt gtttcaagct gttaactaga ggctgattga
      421 ttgttgttcc tttgatggga tatgctgatc taatctcact gtgtgcacgt ttgcaataaa
      481 ttacacaatt catttccccc atttagaggg ggggaaatca cacctcgagg catgcctacg
      541 ctctgcaggc aaaagagcag ggaacctatt ttatggtgcc atttagccag
//
LOCUS       KCHQ01000717             846 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 81099cha ultra-conserved
            element locus uce-1192, sequence.
ACCESSION   KCHQ01000717
VERSION     KCHQ01000717.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 846)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81099cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>846
                     /note="ultra-conserved element locus uce-1192"
BASE COUNT          237 a          204 c          154 g          251 t
ORIGIN      
        1 gtctttctct cgctctctcc atcactctcc ctctccctcc acagttcaac actgatttga
       61 ctgctagcat aattttgcag aggagactat ttgcagatgc agcagagtta tcaatccgaa
      121 cagacacaca atccgggtcc aatgtcactt ctcctcatta tgttaatggt taatacatgc
      181 aaatgaaaac attccggcaa tttgatttct ttgaagatag tttgcatatt gtcttagcca
      241 taatgatggt acactttctc cccagcttcg atttatgcaa ggctagttag ttcattttta
      301 tcagctctga gttcatttct agggctactg gaatgtgttt tccccttccc ctcactattt
      361 aactaattag gattcaggta ccataagcag atttttcacg ctattggtgt ttttcttaat
      421 taagaaacaa atgaattctc cccagcaaaa tagatggaac aacgggatag ggtgccaggg
      481 gccagatgcg gcgcttctta attagaagtc actccattgt ctgaggtttt ttaatgaagc
      541 tccaatctaa atggatatca aaaaagcttc tagtgaagaa aaaacacaca caccggccat
      601 ttaaaataat aaggaaataa agataatgaa agacaaaaga tatgtactgg cagccccggc
      661 tcacacctcc agttccgtgc atgcagtgct ctcgtcacct ttggatgagc cctattaaaa
      721 cagctcgatc cctcgccggc ccctgcctgc ctgcagccat gtctaatgtt ctgccaagcc
      781 aacagtgaaa cactctcttt tcaacttctc atcaaaggtg gaagtttcat taccccgtgg
      841 atggtt
//
LOCUS       KCHQ01000718             518 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 81189cha ultra-conserved
            element locus uce-468, sequence.
ACCESSION   KCHQ01000718
VERSION     KCHQ01000718.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 518)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81189cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>518
                     /note="ultra-conserved element locus uce-468"
BASE COUNT          131 a          122 c           98 g          167 t
ORIGIN      
        1 atctgtatgt gtctgtcccc cctccctgac cctggcctga ccctggcctg tcacaggatt
       61 gctgcccttt gtgtcatgct tctccatgct gactttggag tggagattgc aggtacaatg
      121 tggattgttc tcagtgtgtt ttcaaagatc agaataacaa tggcatttgc tcagctcact
      181 cactcacgct cattgatcac ttgccccctc tctctgcccc tctgatcaca tcagcgattc
      241 ttctcacagt ttctgacagg attttcacac caatgaaaac taaatcgtag acttttgtgc
      301 actattatcc aaattttagg aggaaacacc ttaaattcta actgatgtta gccgatgttt
      361 tcatgggtca ccagttatgt ggattttttg gaaactgatg atgaatctgc acatataaca
      421 tttaaagggg aactagttct cagagttata taaagctaat tggtagtctt ttaagcaaag
      481 aaaaatctgc tatcgtgaca catcccgtct gcatctta
//
LOCUS       KCHQ01000719             300 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 81284cha ultra-conserved
            element locus uce-705, sequence.
ACCESSION   KCHQ01000719
VERSION     KCHQ01000719.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 300)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81284cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>300
                     /note="ultra-conserved element locus uce-705"
BASE COUNT           81 a           67 c           82 g           70 t
ORIGIN      
        1 gaaagtgtct tggtctagtt tatagccctg atcaggtcaa acgaaaaata ttggaggtct
       61 gggtgaggag acaggcccgc ctggtgcaga taaatggact gatcatttct tattgagaaa
      121 caattcctaa aaggtagttt actgtgtgac tggggaagcg gcgagcggag agaagaacac
      181 gcacccactg ctccctccct gacccttcct ccactgccgg aattaaatgg atagagagaa
      241 cgcgcgtttc tgatggcact cctccgccag agagacactc catttgttat gaagtagggg
//
LOCUS       KCHQ01000720             646 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 81539cha ultra-conserved
            element locus uce-86, sequence.
ACCESSION   KCHQ01000720
VERSION     KCHQ01000720.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81539cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-86"
BASE COUNT          155 a          145 c          140 g          206 t
ORIGIN      
        1 gtatggtgtc cttgttgggt gcggagagat ggacccctct ccgtttccta gcataatcat
       61 tctgagcctc agccatgcct tcgacaactc aatcagacag ccctctacct gtaaagtggc
      121 tgggttgatt tgattgccat ttttattgga tcccggtcac ataaatcaaa ccaatgggga
      181 cggctgtaca gacgtgacca ctcgtcattc gctagtagcc ttggaaacat tgtttcgggg
      241 gccgcgtggc tgtcatcgga ggtaaatcag gggtctgaag tttctttcct ccaacacagg
      301 agcatggagt taaatcatct tgaaaattga tgtcactgtg cccaagtgtt ttcacctatc
      361 ccttggatag agtcccatca actggtgaca atgtcagcac ttttaccctt ctctccaaaa
      421 aaggatgttt cctgttctgg ggcctagagg cctgttgtgg ctgataaggg ctgttagcag
      481 ttagttttga cctttttcat tactgatttt tgtctgcttc tttatgcgca ataaaatgtt
      541 ttcctgccaa tccaaacaac tatgaagtta aagtttaact ggcaaacagg caataaacct
      601 ttagttgtaa atttgtttcc aatttctgat ttatatctca tctcag
//
LOCUS       KCHQ01000721             344 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 81627cha ultra-conserved
            element locus uce-593, sequence.
ACCESSION   KCHQ01000721
VERSION     KCHQ01000721.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 344)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 344)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81627cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>344
                     /note="ultra-conserved element locus uce-593"
BASE COUNT          100 a           86 c           66 g           92 t
ORIGIN      
        1 catttccctc cagacataca accagtggag catttaagtc gctagacgca cagccaagac
       61 tcagacaagt gaatttatgt gttaagttgg cgtccccctc cctctccctc actgtctcaa
      121 aggcccagca cagatagtga gttccattag gaatttcaac tcgaattaag gtgcttgggg
      181 aggacacatt aacacatgtg ccgcttctgt agttaaatgt cagaatggga atgaggcctg
      241 tgactttata ttccattagc cactgcctca tgtttccctg ctgtggatct aaataaataa
      301 tcaagacagc ctccaaaaca cgaatcatct tttcacaata atag
//
LOCUS       KCHQ01000722             489 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 81688cha ultra-conserved
            element locus uce-1197, sequence.
ACCESSION   KCHQ01000722
VERSION     KCHQ01000722.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81688cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-1197"
BASE COUNT          117 a          117 c          102 g          153 t
ORIGIN      
        1 cctccagctt tatcttcttt ttatagagtc tccctacctc acctgcaccc tgtaatggct
       61 gttctctata tgctgtttct gttctcattc caaatgtaca tgccagcctc agcccgccgc
      121 cggctgtttt attgggaatg tgcttttgac cccgagagct gaccctcaga tggcaagctt
      181 aacaatgacg aatcacttgg tgggatcatt tacatgcccc ctgaacccca tatttgggtc
      241 cattagagag caaatcaaat atttatgttg tttattggaa gtgcagggtt tcatctcact
      301 ctgtgattgt ttcatgcaaa ggctgggaga ccgtgctata ttaagtatac gcgcacccag
      361 gaaactaatc ttgggtccag tgtcaaaatc tgtctcgcga ccaacgacgc tttgtattca
      421 aggaaagaag taaggtttct ctgtaataaa gccgtgttta acattgtcgc tctctttgct
      481 gaaaagatg
//
LOCUS       KCHQ01000723             714 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 81715cha ultra-conserved
            element locus uce-193, sequence.
ACCESSION   KCHQ01000723
VERSION     KCHQ01000723.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 714)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81715cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>714
                     /note="ultra-conserved element locus uce-193"
BASE COUNT          215 a          137 c          184 g          178 t
ORIGIN      
        1 gtcaggactc catcagcctc acggctaaca ggaccaatgc taatgaagca agcaaaacaa
       61 gttttctcca gtgcaaagag aatctctcta agacggagga aggaaagaaa gaggtagaag
      121 cagggagaca atgagagagc aaagtggtgt gtgtatatga gtgggtgtgc acatgcatgc
      181 atgtgtgtat gtgtggatta ggtggtggtg gtgggggggg ggtttcatgc aagtctcaag
      241 gttgcagtgg gctgactctc cccctaagtc cctaatcaag gctcatcatc tgtcatcctt
      301 ttctttgctc tctctatcac caagctctgt gctgcaatca attcatcatc accctttgtg
      361 tgccattgaa cagttgacaa ctttataact tgcagctgca cgggctgact gacaggggta
      421 gaaggggagt gtgaaaaaat gaagaaagaa gaatagatga atgaatgaac aaagaagcgt
      481 agtttcaggg ggaaaaaaag ttgttttcta aaaacacaaa acgatctata ttacagcctt
      541 tattcccttt tgtcaataga gaaacagcct tgtagcaagg aagagagagt agagagatga
      601 ggagactatc cttctcactg atctgaaatc agaaagcctt cagtcattct ttatgtgctc
      661 cccacagtca ctcactgagc cagtgagcac gcacattagg gtgggcattt tgat
//
LOCUS       KCHQ01000724             280 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 81783cha ultra-conserved
            element locus uce-1196, sequence.
ACCESSION   KCHQ01000724
VERSION     KCHQ01000724.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 280)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 280)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81783cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>280
                     /note="ultra-conserved element locus uce-1196"
BASE COUNT           97 a           56 c           54 g           73 t
ORIGIN      
        1 cctgtagatg gaaaataaaa aaaaaaaaag gctgaagaaa caccaattag aaaggctctc
       61 tctcctgcac tctctcagaa aagccaggct ccgctaaagg tcagcctgaa atttgaatga
      121 cagggccaaa gtcttttact cataattttt gtgtttgcaa tagatttcgg agcaattcac
      181 agccttaaag gccttaagtg gaacagcaat taattgtaat gaataatctg acaaatctgg
      241 ttgacatatg gccgctaata ctcctccttt ctaaagggag
//
LOCUS       KCHQ01000725             540 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 81971cha ultra-conserved
            element locus uce-645, sequence.
ACCESSION   KCHQ01000725
VERSION     KCHQ01000725.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="81971cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>540
                     /note="ultra-conserved element locus uce-645"
BASE COUNT          165 a          108 c          144 g          123 t
ORIGIN      
        1 ctttcgcttc tgcctgagcg ttggagcatg ttgttgatct gaaaaacaca cgatgaacgt
       61 gtccgcgtgc gatttgcatg ggtaaaatgc aaacaatacg gcggcgatca ggcgaggcgc
      121 caggagtgcc gcggcgtctt atcctctcag tctgcaaaga gacgtggcca aggttattaa
      181 agaaggatgt agcagagcaa gatggccgct gttgtgacca gaggcggtgt ggagagataa
      241 atggttgacc cagcctggtg tcaggttagg attgatgcca ctatcagccc cactgctttc
      301 ccaatgattt tctcaaatct ctgatagagt gtgttatcta gttactggca tgagggcaac
      361 ggcctgcagg cacagagaag gtcaatctat gaggacaatc tttgttggac taaatgagaa
      421 aaaagacctc acaaaaaaag aataaaaagc agctgctagg tctctgggat aagataagcc
      481 aaattacttc tctttagtag gataggcctc gggcaaaaca tcaaaaaaag aagaaaaaaa
//
LOCUS       KCHQ01000726            1043 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 82057cha ultra-conserved
            element locus uce-644, sequence.
ACCESSION   KCHQ01000726
VERSION     KCHQ01000726.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82057cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>1043
                     /note="ultra-conserved element locus uce-644"
BASE COUNT          301 a          186 c          207 g          349 t
ORIGIN      
        1 cctgtttgta tttatttatt ttattgattt tactttgaag taggaaaatg taatagtttt
       61 gatttgctga gatattacac tccatacagg gagaccattc agccgctgtg tgtttgtatg
      121 tccgtcaggg gggtttctcc tgctcacatg taaacacaca gacatacttt catgtgaaaa
      181 agcaagccat ttatttgaag cataactcaa atgccatgga tttgttgtcc agcttactgt
      241 gcctgatgat gccatgcagt gtgtgtttgg ggggtgttat agcaccgggg gccttacgta
      301 actaactaac tggagggtag ggtttatcga atgaattgca gctgacttcc atacctcaca
      361 cagcgttggt gttgtgagcg agaccacatg agaaaagggc aaattaaaaa tcatggatac
      421 tctctgactg tcaaactgtg caggtactca ccccaggtac tcctttctct acccacatcc
      481 atttctgaat gctgttgcct gtcagaaaaa caattctgta cttctccaga acatgaactt
      541 gaaagcttga ctgtgtatat tttttattgt gtttctttct tttttttttt tgtatttgtt
      601 aactttcaaa tatgtttggg gaaaaagtca ttctgtagaa atgtcagaga cacatttttt
      661 ttaactgctg aaatgcacaa acagcatgtt tgatacacct acgccaacag ctaaagatgt
      721 gtgtatttgt gccttaggat atttttaacg tcacatttga tcagtgagta ggatactgcg
      781 ttcgtctcta tccttaattg gtcatcgaat ctcctaaaaa atgaaataag tgcacttcgg
      841 cattggcgta aggaatatca aacactgatt ttaaaagatg gtctaaggta gtgaccaaac
      901 cttgtggcct tgtcttagac tgatcttaag tgcaactttt gatcaaaaca gtatcagtta
      961 aaataatctg acaaatatgt acaaaaaatc aggatattct ggctaaatta cactattgtg
     1021 caagtatata aggataatat ttg
//
LOCUS       KCHQ01000727             374 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 82418cha ultra-conserved
            element locus uce-129, sequence.
ACCESSION   KCHQ01000727
VERSION     KCHQ01000727.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 374)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 374)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82418cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>374
                     /note="ultra-conserved element locus uce-129"
BASE COUNT          103 a           86 c           73 g          112 t
ORIGIN      
        1 atttcatttc gttggtggcg gaggaaaaga ttttttatta aactttatct cataactgtg
       61 atctggaata aatgcgggtg gacagattga agtttccagg caactgtcac tggcccccat
      121 ctctgagaca atattcagac agcaatttcc cctggtgcat tgctttaatt aaaagagcaa
      181 tttacctctg tcagcccgcc tggtgcccac aataaaaaga ggccgataga aattcggccc
      241 ttatcaatcc accatcacag tttaataaag tttccgcgtt aagatctgag tttctatggt
      301 gaattgaagt gtttgacatg gaaaccagtt cagatcctcc tcacttttcc gcctctttac
      361 ctctcggcaa acag
//
LOCUS       KCHQ01000728             963 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 82513cha ultra-conserved
            element locus uce-126, sequence.
ACCESSION   KCHQ01000728
VERSION     KCHQ01000728.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 963)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 963)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82513cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>963
                     /note="ultra-conserved element locus uce-126"
BASE COUNT          300 a          198 c          170 g          295 t
ORIGIN      
        1 gatgtaccat gcattcaaaa cttacttctt gttctggtcg tcatggccat ttgcatgaga
       61 ggacttgagc tcatcctaag caaggttgat agaagaacat catgaggacg tagatgaaac
      121 atttcaagtc gtcaaggtaa agggggtggg gtgggacaag agaaaatgca aaatatattc
      181 aattaataat aatacttcaa acttcctact gtcatgtctg gacagtgtcc ttccaccacc
      241 ccaatagctt cccatcccac tcctgttttt tttctttttt ttttttaaaa caaggctgct
      301 cagtacttaa tgcaacaaag caaagttaag ggagagtgtc caacaattag ctgagttcag
      361 gaagctttga cagtagtgag atgatctcca ccattcccct tctaataggt cgtaccaatg
      421 ccactgccac tatttgtgcc taatcatgtg accacgcgtg gcccacgacc actaaaagag
      481 atcctgtgtg gttggtgtca gtccagtgat cttcacccat tttcgttctt ggactgtaag
      541 agctcgatgc cacctctgtc acacatcttg ccctgaagca aacagggatt cacacttctt
      601 agtaatattg acgcccaaga aaataaatga ataaattaaa ataaataaat aaatccatta
      661 attcagccac gtgttacact tccattatct gtattttaca taatatatat atgtatatat
      721 gtaatatttc caacctctgg tttaaggaat taacaactga gaactcactg taaaatacaa
      781 tgatgataga cgtatctatt ttacagtcat tctactgata gctcaatatc tgtggtattg
      841 tgttgcatgc aaaatcaaga tgctgattca cattacagtt gactaaggca aagaggcaat
      901 attcatattt acacaagtaa ttattcacct gtattttgcc ttataatcat gacatggctc
      961 atg
//
LOCUS       KCHQ01000729             526 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 82608cha ultra-conserved
            element locus uce-127, sequence.
ACCESSION   KCHQ01000729
VERSION     KCHQ01000729.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 526)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82608cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>526
                     /note="ultra-conserved element locus uce-127"
BASE COUNT          117 a          141 c          127 g          141 t
ORIGIN      
        1 tttagcgtac tcagagttac gcgatgtgac gcgatggtcg gctgctcgct tgctgttcag
       61 gctcgccgtt gctggatttc agagggatgt tcacactcct tcgcagtcag gtgtgctctt
      121 cacttctacc tgtgcttcct catacgcctc ctgcaccctg tgctgctctc acagtgaaag
      181 gatggcttga tgggaccgta actttcagca ttcttatcca tccacaacta tcaccacacc
      241 agtcctctgc ctcgcctctc cacactggag aaaaaaaaaa tcaaagaggg tattaggcag
      301 cagggttatt cccgacactt tgctggaggc tggcgttaat ctgcgcgttt tggagaaacg
      361 aggttagtta agcattttaa tggccctagc cctgtgataa ttaggcctgc cctggaggga
      421 gctccagttg agccacttgg gccttgaaat ggagccaggg aagtaaagcc ctgcacgcac
      481 acaatgatcc tgaactaatt ccctgagtaa atattttctc ccgttc
//
LOCUS       KCHQ01000730             433 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 82706cha ultra-conserved
            element locus uce-124, sequence.
ACCESSION   KCHQ01000730
VERSION     KCHQ01000730.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 433)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82706cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>433
                     /note="ultra-conserved element locus uce-124"
BASE COUNT          139 a           95 c           92 g          107 t
ORIGIN      
        1 tagcaaaaca ctggcgtaac acatcatcac tctttatgag gctggggcct gcaagagaga
       61 gagggggccc acagacgatg ctaaaaagac ggtaatgaca gccattcact gcaatccaat
      121 tatgcaaaag ggagtctaaa caattccatc atcccctaaa ttagattgtc ctaacgagat
      181 aaaggcacca attaatcctg aattaatttc tacagctcat tttccccaga aaacactcta
      241 atatgcaaat gccaatgaga gacagagagg catccttctg caggggctta cagcacctct
      301 gcttgttggc ttttctctta tgaacttaga cacatattgt gaggataaaa ttgaggaata
      361 tgacacatgt agcagctcag gtgcggcact gaagtgaaag gcgaatttca ccagctttag
      421 cgtttagttc gat
//
LOCUS       KCHQ01000731             529 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 82977cha ultra-conserved
            element locus uce-120, sequence.
ACCESSION   KCHQ01000731
VERSION     KCHQ01000731.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 529)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="82977cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>529
                     /note="ultra-conserved element locus uce-120"
BASE COUNT          136 a          118 c          109 g          166 t
ORIGIN      
        1 ctttgttttt ctttctttct tgcttgcttg ctctcttttt tcccacctcc ctctttcagt
       61 gtccctgcag attcccctgc tgtcggctct cgtcacattc cccaatctgt tagccttctg
      121 ataccggggc cagacttgaa aggaagtctt aaggacgaga gcttatacac tgtgccagat
      181 tttgttaaat aactacgaga tgttggtgcc aattcatcgg taattgtccc ttctggcaca
      241 gtctgttgaa agtcctggag aagcctaagc tcaagatcac tgcaagtgtt aatcttctta
      301 tacttaaggt atcaggtttt cttttgatgt cgctaaacat gttgactcct atctcagcgc
      361 agaaggcaat ccagacatag ctacgagcga gatgggggtt tgtctgcctt cttcttccaa
      421 gaatctcatg gtttatgtgt tcctttgcta gcattcatta tgctgctgaa ataaagcaac
      481 aacaaaatga aaggagaaaa aaaaaaaaag gaaacgggaa gaaagggat
//
LOCUS       KCHQ01000732             224 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 83072cha ultra-conserved
            element locus uce-648, sequence.
ACCESSION   KCHQ01000732
VERSION     KCHQ01000732.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 224)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 224)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83072cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>224
                     /note="ultra-conserved element locus uce-648"
BASE COUNT           60 a           58 c           26 g           80 t
ORIGIN      
        1 ctttctttct cctctagtac ctttatttac gtaccctgtt aaatctaatt tgattcttct
       61 tccaaagccc ccagcctcta tctactcgta ctaatgcttc ttctttctaa tcttatttgc
      121 attcatatta tccacccagg tggtacacca ataagaggta agagtgctga actgacgttc
      181 acagaatgaa aataatacaa attcattctt gctgtcaacc catc
//
LOCUS       KCHQ01000733             507 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 83121cha ultra-conserved
            element locus uce-284, sequence.
ACCESSION   KCHQ01000733
VERSION     KCHQ01000733.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 507)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83121cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>507
                     /note="ultra-conserved element locus uce-284"
BASE COUNT          163 a           93 c          119 g          132 t
ORIGIN      
        1 catctaggat acgtccgaac cagtaaactg gtaaacaagc tggccgttag gagtggggat
       61 gatttgaatc aacaagggtg aacagatatg gatactcggc gcattagtgt taataggaat
      121 agattatgga gggatttcgt ggagtgacct tcagtgcact aattgaaata gtattccgag
      181 tcagcagtgg agtaatcaac ttaaacacag aatcataaat catcatgaat agcgctgtca
      241 caaccaagcc attagcctcg tgttttttcc cccgcaacct catgaaaata tctgccacac
      301 cgatccgtag gttaatagga acagaaatgg catttagact ctatttggat caaatgtact
      361 gtgagcttga aagtagaact ttgctaattt gcaggtaatg tgaattgatg tagtaagggt
      421 tgaagatagt tcaggcaacg agtcaacaca ataactctgg aaagacgcaa gagcttgata
      481 aagcctcgtt cacaaggctg ctttgtc
//
LOCUS       KCHQ01000734             824 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 83203cha ultra-conserved
            element locus uce-699, sequence.
ACCESSION   KCHQ01000734
VERSION     KCHQ01000734.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 824)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 824)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83203cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>824
                     /note="ultra-conserved element locus uce-699"
BASE COUNT          272 a          165 c          154 g          233 t
ORIGIN      
        1 ataactagag ggggcagtct accctcctga taactccaca gtctagtgag agttaccagc
       61 tctttaacaa ctttaacaaa gaaaccccca cagtatttta ggtggaaaat ggttccagta
      121 gactcctcta catctgactc tcattatatt atctgttaaa ggccatatag tgttacatgg
      181 aatcttaact agctcattat ttttgcaggt acagtgagtt tcctcttttt agctacaaac
      241 agctgcgtac tgaagaaaat taaagcaaca gctctcaagt gcatacacaa atgaggttgc
      301 tgacatcggt ggaaggggat atctacttca ctgagcggca gaggtgaatc aacagatttg
      361 gcttctaatc gaagactgaa aaaagacaga catatacaga cacgccaacc tgtgagagga
      421 catcagtaat gggctcacat tttcctaatc tcctttgatg gattcaggcc atgattttca
      481 tttagtccaa aagagataac caaactgtca gctgtgctgc tgctttgctt taatctccgc
      541 ctgcagccaa taatcaccct gcaacccgca accctttgtc aattgttaat cttgtattga
      601 agacatttag atgccaggat ggtattctgc atcctaggat aatccaggag ggcacagagg
      661 agaagaaaat tagattcatt attaaatttt tcattattaa aaagacaaat taattgagtt
      721 ctcaaaagaa tttgtggaat caatttaaaa ataaccatta aaatgcagat gcatataatc
      781 tacatcagat ggacagaaag attagcagag caatctatgc actt
//
LOCUS       KCHQ01000735             418 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 83393cha ultra-conserved
            element locus uce-1027, sequence.
ACCESSION   KCHQ01000735
VERSION     KCHQ01000735.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83393cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-1027"
BASE COUNT           91 a           99 c          109 g          119 t
ORIGIN      
        1 tgttattgcc agaatattgc ttttaattgc tgtcctggat tccccgctgc agtataggat
       61 gagtctgaga cgattactca aagtaatgga gcataatgat gtctcggaat ggcccctgaa
      121 gctcaggtca ggggttggac aatgtgaaca ttcagctact tagcttcctt tgcaactttg
      181 tgacaaaatc tgtttgccca acaccaatta agatgcctct ctgtgcgctc tggtcaatgg
      241 gtttgacgga gggggtcgtc caacgagttg acatgtccct gagcacgaac aagctggcct
      301 gtgtcctcgc ctcaataatt ggtgtccctt gcaacgtgcc gcttcccagg gctgtccttt
      361 gtgtccccat ggcagtccta aatgagggga gtcagggctt taatgggact cctgttag
//
LOCUS       KCHQ01000736             227 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 83576cha ultra-conserved
            element locus uce-348, sequence.
ACCESSION   KCHQ01000736
VERSION     KCHQ01000736.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 227)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 227)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83576cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>227
                     /note="ultra-conserved element locus uce-348"
BASE COUNT           68 a           52 c           51 g           56 t
ORIGIN      
        1 gccaatttat tgccgatgaa catatggcca atattttgtc tcacgtcata gcaaggggaa
       61 aacaaacacc atgcaatgtg agcgagtcag caagagcaga gccacttggc cagctatgca
      121 aacgctcttg gacaatatga gaagaggagc acttgctttc tgggtatata aagcacatca
      181 ggcttatctc tgcacgcact cctgactccg atttggagat atttcat
//
LOCUS       KCHQ01000737             469 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 83672cha ultra-conserved
            element locus uce-349, sequence.
ACCESSION   KCHQ01000737
VERSION     KCHQ01000737.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 469)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 469)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83672cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>469
                     /note="ultra-conserved element locus uce-349"
BASE COUNT          139 a          101 c           77 g          152 t
ORIGIN      
        1 gagtaaattt gtgtgtacaa tttaaagaaa ataaattacc ctggatttat cctgctgttc
       61 ctgtgtatca ataatgtaca cgcggtatat ttgtcgtgct tggggattaa agtaattcta
      121 attctcttca aaacaaaaaa agaattcata ttttgctgca tttgctcacc atcaattaaa
      181 tgaaaaaaga catcctgata cactccttca ccatccccga cacctttgct taatccactt
      241 acaatatttg agctgcttcg caaacaaatt gatatcatca attgtgatgt tggcaaatac
      301 cacagccaat ctgctcatga atgtttatct cctctaacac tcacccacct gctaagaggt
      361 gccacgcttt aatgaaattg tttggactac cggcgcccgt tgctaaggaa ctgtgtgtct
      421 cctggttttt tgcctgcaga tttctgtcat caaataatga ttagagatg
//
LOCUS       KCHQ01000738             213 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 83847cha ultra-conserved
            element locus uce-340, sequence.
ACCESSION   KCHQ01000738
VERSION     KCHQ01000738.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 213)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 213)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83847cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>213
                     /note="ultra-conserved element locus uce-340"
BASE COUNT           53 a           55 c           59 g           46 t
ORIGIN      
        1 tgtagctgtg catgcctgcg tggacctcca tgtgctgctg cagggccttc tgggtctgga
       61 agcgctttgc acacagcaga cagaacaccg ccatgtcagt ccctggagaa cgcacaagac
      121 acagacacag ttatttcagt accatacaca gacagggcct taagtgggga aactgggtca
      181 cttcaacttt gtgtgagtcc tctgagggaa aag
//
LOCUS       KCHQ01000739             384 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 83942cha ultra-conserved
            element locus uce-341, sequence.
ACCESSION   KCHQ01000739
VERSION     KCHQ01000739.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 384)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="83942cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>384
                     /note="ultra-conserved element locus uce-341"
BASE COUNT          111 a           78 c           68 g          127 t
ORIGIN      
        1 tggtcctccc caggtctgtt ttaagagcgg ctacagtgac gacgagatcg aagagccctc
       61 gcgactttaa accactccct ccacctgcct cctcctctcc cctcgccgct gaacttcacc
      121 acaaactcca accgagtgca aatcttagga actcagtgaa tgttgacctg tatttatgag
      181 ctgtattaaa agtgtattat aattaaagaa aaaagtatga gtttaaagat tttgtacatt
      241 tgtacttgaa tttatgtcta gatgtatatt ttcactaaag gttgtattgt acaaaaagcc
      301 ataaaagtac cacttgaatg catacattac atttttattt cctgtttatt ttcttttgga
      361 atgagtatgg ataatgtgta ttgg
//
LOCUS       KCHQ01000740             322 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 84034cha ultra-conserved
            element locus uce-346, sequence.
ACCESSION   KCHQ01000740
VERSION     KCHQ01000740.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 322)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 322)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84034cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>322
                     /note="ultra-conserved element locus uce-346"
BASE COUNT           57 a          114 c           84 g           67 t
ORIGIN      
        1 tgactctccg cgttcacaga tcgtgccggg tgcgagatat gccatgccta gctctttcct
       61 gcaggaccaa tttgtcagca cttatgccaa atctcgcttt caccctggca tggggactgg
      121 tcctggcacg gagcgcagcg tcccactcgg caacagcttg ctatccccgc agcaaaccga
      181 ggagcccact gttgccaccc ccccgcagcg atggtttgtc acccctgcca acaaccgact
      241 ggactttgct gcctcggcat acgacgccgc tgatttcgcc ggtaacgcgg ccaccttgct
      301 gtcctacgca gcggccggag tg
//
LOCUS       KCHQ01000741             306 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 84131cha ultra-conserved
            element locus uce-344, sequence.
ACCESSION   KCHQ01000741
VERSION     KCHQ01000741.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 306)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84131cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>306
                     /note="ultra-conserved element locus uce-344"
BASE COUNT           83 a           72 c           54 g           97 t
ORIGIN      
        1 cctccagttg ctctattaat aggttggctc gtttgttaag ctcgttcatc ataatcatct
       61 ttgccatttt aatctggttc tctgccttcc tgtgtgcaat ctttactcca tgaagcctac
      121 agagacagaa aggcgaaaaa ataaatgcct cagtcaaaaa atgcagaaga agaaagcagc
      181 atttcagaca ctcatttatg cattcgctcg ctatatttca cactgttaaa ttattgacca
      241 tttgtggcag acgttcctca gactcgggac tgtgtgagcc caaaccaacc tgtcttctat
      301 ctgttt
//
LOCUS       KCHQ01000742             489 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 84227cha ultra-conserved
            element locus uce-345, sequence.
ACCESSION   KCHQ01000742
VERSION     KCHQ01000742.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 489)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 489)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84227cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>489
                     /note="ultra-conserved element locus uce-345"
BASE COUNT          134 a          109 c           98 g          148 t
ORIGIN      
        1 aggttcattg cagtaagtgg ttgttaatca gcaatctgtc actttttaca tttttaataa
       61 gcacaatggc tcctggtgtc tctcctctct atgtctgtct atattggcac tccagtgttt
      121 tttctctcag gctaaaccag gacgtagaca ggtacacacg aagaactaaa cttttccatc
      181 ttcactcaac tactcagcct gtcatttatc aactcgcagt gtacacatgc tccacacaga
      241 caaacataca gctatttgat caatgattag cctgtaaagt aatatgttgg aagtcagcaa
      301 gatttgtcca atctcctttg tgtttttcaa cctaatctgt aaaatcccag cctgcaggga
      361 ggaatgttgc taatgaggga taaaagctta acatacgttt gcacaatgga ctggtcaagc
      421 agcggttgct aggctactgt ggccagaaga atggctagga ctcagagggt ctcaaagccc
      481 tcgttttgt
//
LOCUS       KCHQ01000743             318 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 84324cha ultra-conserved
            element locus uce-23, sequence.
ACCESSION   KCHQ01000743
VERSION     KCHQ01000743.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 318)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 318)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84324cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>318
                     /note="ultra-conserved element locus uce-23"
BASE COUNT           79 a           94 c           71 g           74 t
ORIGIN      
        1 aagaaaaaga gatctgtgaa tttccccttc ctcccctgag acctcccttg atgccaagca
       61 ttcatcatcc agcctctaat atcagttatt ctgtggctcc tctgcttaca gcagaattaa
      121 tttctgcttt aattactctc atcggcggaa tgctgatgaa ggagagggac gaggcattct
      181 gggactcagg cctcattcca ccgctttaat ttgaatgaat tccacccgga gacgctggca
      241 aacaactggc agccgagccc cgggagccac tctgggactg cgcagaagag ctgcagccat
      301 ggcccccacc aacctagc
//
LOCUS       KCHQ01000744             257 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 84500cha ultra-conserved
            element locus uce-462, sequence.
ACCESSION   KCHQ01000744
VERSION     KCHQ01000744.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 257)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 257)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84500cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>257
                     /note="ultra-conserved element locus uce-462"
BASE COUNT           70 a           52 c           65 g           70 t
ORIGIN      
        1 cgaggcaatc atttacctgc attgacaggt caaaacacct ttcattagag ttacgaggca
       61 tctcatcaag atgcggccgc gctcgcagct gtatgactgc tgtgtattgc ttaagtgtgt
      121 ttcattattc ccaaagcaac gttgatgatg gtgagggaaa ggattacacg tcagggtgag
      181 tgattgggtt tgaacagagc tgctgcatac actttgtatc aacccagggc tcaaattaca
      241 cttaggttga aaacgga
//
LOCUS       KCHQ01000745             469 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 84589cha ultra-conserved
            element locus uce-788, sequence.
ACCESSION   KCHQ01000745
VERSION     KCHQ01000745.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 469)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 469)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84589cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>469
                     /note="ultra-conserved element locus uce-788"
BASE COUNT          107 a          140 c          103 g          119 t
ORIGIN      
        1 caaacattta ttccaggtgt tttgtgttga tgatctattc ctaaagcagt ggaataaata
       61 ttatattagc tgaaacaaac actggtagtg tgtgaatcca aataaccgtc caccacagca
      121 ctccccatct gtacctcatt cccatcctct tctcgcaaac ctctccaggt ttgacctgat
      181 agctaacggt ggtgcatcac tgactctgcg gttcgagcgc gcccccttcc tgagccagga
      241 gcgcaccgtg tggctgcctt ggagccagtt ttatgctatg gacactctgg tgcttaagac
      301 agaagagaac acgatcccgg gctgtgacct gagcggcttc gtcaggcctg accctcttgt
      361 gattgcatcc cctctctcct ccttcttcag ctccaagcca ggggagaaac ccatcatacc
      421 ggagacacag gtgcagtacc actgacctct ggcagccggc taatctcct
//
LOCUS       KCHQ01000746             313 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 84681cha ultra-conserved
            element locus uce-460, sequence.
ACCESSION   KCHQ01000746
VERSION     KCHQ01000746.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 313)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 313)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84681cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>313
                     /note="ultra-conserved element locus uce-460"
BASE COUNT           74 a           94 c           89 g           56 t
ORIGIN      
        1 cttgtgtggc cagagcagcc atcgcgctga tgcaaagtga cagggacaga tgtgacatat
       61 cggttccgac acacttccat accaccagtc acaggctcgg ggtgactcac atccccctgc
      121 tctggtcctg tccccccgct gcaggacaac acaacgatgc tcgaatgaac ctcgccatcg
      181 ccctcactgc tgccaggtat ggggctgcca tagccaatta cactgaagtg gtgcacctac
      241 tgaagagggc agaccctcag acggggaagg agagggtctg cggagcgcac tgcagggatg
      301 tgatcacagg taa
//
LOCUS       KCHQ01000747             413 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 84776cha ultra-conserved
            element locus uce-38, sequence.
ACCESSION   KCHQ01000747
VERSION     KCHQ01000747.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 413)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 413)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84776cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>413
                     /note="ultra-conserved element locus uce-38"
BASE COUNT           94 a           82 c           99 g          138 t
ORIGIN      
        1 ctctagcatg cacgcccagg tgcacgccag ctccattcat gttgtgtgag cacacgcatg
       61 ggtgtattct tttgtgcgca cgtgtcattg tgcccgtaga tgtgtgtgcg tacgagtgtg
      121 agtctgtgca tgtgtgcact ggcgtgtgtc acttaatctt ttctcctttt tctttctgtt
      181 ttatatttac tacgtcaggc aacaaatgaa tcatctttat tacggagaaa tttaatttgg
      241 atgaacttaa ctgctgccgc caaggtcaga cgggcagaat gtcattttaa tccaatcaac
      301 tttaatctgt tggttataaa agagttaggc tgttgaagaa tggctgtatc tcaggccctt
      361 tattacactg gctaatgact ttgattgtga ggcgcctatc aagaggttag gag
//
LOCUS       KCHQ01000748             418 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 84870cha ultra-conserved
            element locus uce-465, sequence.
ACCESSION   KCHQ01000748
VERSION     KCHQ01000748.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 418)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84870cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>418
                     /note="ultra-conserved element locus uce-465"
BASE COUNT          105 a           89 c           86 g          138 t
ORIGIN      
        1 gcctcctcct ctggagaggc taatgcaggc cccttttttt tcctcttgca atctcaccaa
       61 atgccaagtg taactggtgc ccctattgct cctaattaat gtgtgattaa agagtgaaat
      121 aagggattct accagtgatt tgttttttca aggagtaaga aattagtccc ctttggatct
      181 tgcagaatca tttaaggatt ctccttgttc tgtttatcaa ataaaccaag taattagaga
      241 ctttagataa gtaggctaaa ttgatgcccg ccctatgtct tcccaagcta gtgttccctg
      301 atagaaacag ctgtgttgct ctggtaatgt gcagcattat acttgtccaa taacaatgcc
      361 ctttgtgttt ggtagtcgtg taattacgct ggggagcctc cttgaccttg gtaagcac
//
LOCUS       KCHQ01000749             258 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 84959cha ultra-conserved
            element locus uce-782, sequence.
ACCESSION   KCHQ01000749
VERSION     KCHQ01000749.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 258)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="84959cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>258
                     /note="ultra-conserved element locus uce-782"
BASE COUNT           66 a           61 c           79 g           52 t
ORIGIN      
        1 gctgatacag agaatgaaaa gcagcctaac tcatctacag ttagctttcc cccaggcaca
       61 aagcccttcc ccaaacagca gccagcttgg tgggtgggcc cttacttgag gcgagccgcc
      121 gggggagaag ccttgattgg agactgggga ggttggagac tgagtggctg gggagccagt
      181 ctgattgcgg tactgttgga gggaagaggg ttagctagca ctaagcttca tgcctatcac
      241 atacaaatct caaaggac
//
LOCUS       KCHQ01000750             302 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 85025cha ultra-conserved
            element locus uce-783, sequence.
ACCESSION   KCHQ01000750
VERSION     KCHQ01000750.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 302)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 302)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85025cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>302
                     /note="ultra-conserved element locus uce-783"
BASE COUNT           79 a           55 c           98 g           70 t
ORIGIN      
        1 agagaaatgc aagggtagag ggacggagga caaaatgggg aatggagcaa cgagagtatc
       61 attctcagtt acactgtttc acatggtgga gcccctcttt aaaaggccaa ttactctgta
      121 atagtcctag actgactagg tgatttctca ctgtgctgag tggaatggca gtgcaggagt
      181 ggagtcagtc cagtggagag acccaatcat cattgcactg gagtgaaggg agtcaaggga
      241 cacgcacatt tgtgagtgcg tgggtgcgtg ctttgcatgg gcgtgcgcga acagtctgtg
      301 tg
//
LOCUS       KCHQ01000751             336 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 85119cha ultra-conserved
            element locus uce-469, sequence.
ACCESSION   KCHQ01000751
VERSION     KCHQ01000751.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 336)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 336)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85119cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>336
                     /note="ultra-conserved element locus uce-469"
BASE COUNT          110 a           59 c           54 g          113 t
ORIGIN      
        1 aattacaata taaaaaaatc taaaagtcaa gaaaactgaa aaaaatgtct ggagggttgg
       61 gggacgctct tcccttatta ctagaaacag ttactcgcta tgcataacct agttaatagt
      121 taaatttgct attgcttttt tcttgtcttg ttaaaatgaa atctttagat ctttttcaat
      181 aaagtttagt cttaatagaa tgttataaac agtcgttctg gttcaatata acctgtgata
      241 agtttgtgta gttctaaaaa gccactccgt ccacaccctc cctccactta ctaccgcttt
      301 gtgatgaaac cttatgcaaa aatgtgggtc tgaaag
//
LOCUS       KCHQ01000752             325 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 85211cha ultra-conserved
            element locus uce-781, sequence.
ACCESSION   KCHQ01000752
VERSION     KCHQ01000752.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 325)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 325)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85211cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>325
                     /note="ultra-conserved element locus uce-781"
BASE COUNT           82 a           78 c           79 g           86 t
ORIGIN      
        1 aggaagggat tgttagtcgg ctgatgccag tggatgtagg tgcaggcctc agaccaggcc
       61 tgccaacaat agccacagtg ttgtttgggt agttgcgtcc aggactcttg gacattcttc
      121 ccatgtcagt ataatcacta ctgggaggta gctccattac ggattaccat atcattaata
      181 gtatccatga cttttgttca aaggctactt gtgtaatgtt gccttgtgga tgacggctaa
      241 tccgctgagc tgcagctgta ggaaagaaga ggggtagatc ccaccatcag tctctctctc
      301 tacctcacac acacacacac acaca
//
LOCUS       KCHQ01000753             771 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 85312cha ultra-conserved
            element locus uce-31, sequence.
ACCESSION   KCHQ01000753
VERSION     KCHQ01000753.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 771)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85312cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>771
                     /note="ultra-conserved element locus uce-31"
BASE COUNT          232 a          152 c          190 g          197 t
ORIGIN      
        1 acacacacac acacacacac acgtgaacat atccatagag ccaggctgaa aaaacaatta
       61 cagtttctca ttaaggcact cctaatccct ttatgcaaaa cacagttaca caagtacaca
      121 caatgaggaa aaagagagaa tgagggaggg gaggagagag gagggagagt gaagaaaaaa
      181 atgtagcgca aatgcgagga gaataattac atatatcatg aagccgtccc ttttatttcg
      241 gatgtcactt ctgatgtcac tggccggctt tggcgctaat ttgaattcag acctttatca
      301 gtcgccggca gcagattttg agtgacagcg ccaccaaacg cctctcgcca gccgtcctat
      361 tgatttctct aaatccccaa caatagcatt tgcatgcttg tttctgttat aatacagata
      421 tgccgtttcg gaaattaaag agcggcaggc agaccagagg taactaattg tgtgcctgtg
      481 taatgagtgc agtttcaatt tgatataacc cacagctttt cccctcgcag gcccgcgcta
      541 agtactttca agtctttgtg gggaaataat tgatttttgt gctttgggca cagggaaaac
      601 tattatgatc tttttgaata atggcagcgg gaggaaaggc acgttgaacg atttaaattg
      661 gtattagagg agaggaagga aggaaaggag ggcttggtga cgggtggagg actgatagct
      721 ggatttgact gacagtcggc aaatggctcc cggtttgttg attactcatt c
//
LOCUS       KCHQ01000754             620 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 85409cha ultra-conserved
            element locus uce-30, sequence.
ACCESSION   KCHQ01000754
VERSION     KCHQ01000754.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85409cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-30"
BASE COUNT          200 a          137 c          125 g          158 t
ORIGIN      
        1 ccattcacac aaagccagat gaaatcagta catgcaacat gaagtgcaaa catactgtgg
       61 acgagcagat cccagttcag caattgggac tagaatgatt tatagccaca aaggtgtcac
      121 ttagatgttt atgagctcta gtttttccaa gtcaaagcta agaaagctgc agtggtgcat
      181 ttcttagcct tctatcattc actttgtcag aaacaaaatg tccaaagtag ctcaacaaag
      241 gcaagacgga caccagcaaa aagtttattg ttctattttt aactcccaaa tagcaatttt
      301 ctggttttgt ggcggcagtg atctgtcatg tggctgggag gttgtgctgt ttgcgctgat
      361 atcaattaaa agtggattaa cgggtacata atgaccttta gcagtaaatt gtgtgtaatg
      421 ttgcaaggca ggatacagta tattccccag atgtcacacc aggcccctga cgtatgatgg
      481 agcagatgtc ttagccagtc caaatggccc tctaagacac aaacacacac atacatacac
      541 acaggctcag gcctacaagc atgcataaac atgtgttcac acacattcca aatggcacac
      601 acacacatgc ataaacacac
//
LOCUS       KCHQ01000755             315 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 85597cha ultra-conserved
            element locus uce-32, sequence.
ACCESSION   KCHQ01000755
VERSION     KCHQ01000755.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 315)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85597cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>315
                     /note="ultra-conserved element locus uce-32"
BASE COUNT           85 a           60 c           88 g           82 t
ORIGIN      
        1 tatgtatgct ctgtaagtat gtgcgtgagg gggctgggca ccaggggatg gtgggtaggg
       61 gggtgctcat gtgccagaag tgtttattgt gtcatggtga tttattgagt gagcttcatt
      121 tcactgaatg ttctcagata tttatttccc taaaggcccc acaaagatat gaacaggcct
      181 gcatccacat atgtcatcat tgcccatttt acagcgtcag gagatttctc tcaaactaag
      241 agggggaaga aaaagagaga gggagagaaa cagctagtgg cgatcagggc acctctccat
      301 caaagccctg taaac
//
LOCUS       KCHQ01000756             674 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 85684cha ultra-conserved
            element locus uce-236, sequence.
ACCESSION   KCHQ01000756
VERSION     KCHQ01000756.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 674)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85684cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>674
                     /note="ultra-conserved element locus uce-236"
BASE COUNT          165 a          162 c          161 g          186 t
ORIGIN      
        1 taaaagcatg gccgggctag gcagccattc tctctgaaag gcttcgtctc ctgttgcaaa
       61 acacttgact tttattcccc aattcttccc tcaaacagct caatctagca tctcgcgcag
      121 atctggagga gctttctccg gtcaagattc agcacgttta acttttttcc gatcggcttc
      181 accttcagcc aagtagaagt tagagatcgt gcagagcaaa taaaagcact acaaagtcct
      241 ccccatttct gatgaaacac tgtagcctgc aggcatcgct gggaaggaaa tcatctgcgt
      301 gcagctcctt ctttggagct cgtgtgtttg tgagagcagg agaaagaaag gaagtgtgtg
      361 tgtgtgtgca tgcgtgtgtg tgcgctttaa agagagtgac aacccccctt ctctctcatt
      421 agcacggtat cttggtatca gaactgccag gaagtgacag accactgtaa aagaacaggt
      481 gctgttgggt ttgagatgtg ttacagagca aacactccct catcaaaccg ggtgtctgtt
      541 ctgcactctg cctctgtctt ctgtcacata ctatccaaat cacacagagt cgccatcttg
      601 tcatatggtc atctgaatga agctcattgt cagcgaaggt attaatggca tgtgtgtgtg
      661 cgtgcgcctg tgtg
//
LOCUS       KCHQ01000757             644 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 85778cha ultra-conserved
            element locus uce-237, sequence.
ACCESSION   KCHQ01000757
VERSION     KCHQ01000757.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 644)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85778cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>644
                     /note="ultra-conserved element locus uce-237"
BASE COUNT          175 a          132 c           92 g          245 t
ORIGIN      
        1 cccttgtaat tattatttca taaatcatta agacagtaat tcacaagatt cattgctatt
       61 tctattaatt attgaaataa tttatgtaat gcatagatcc ttcttcattg attggattgt
      121 catttataat cactccttac agttattaaa atattattct tgcaccgtaa agggtttaaa
      181 tatttgcaac aattctggtc ttgatttgta tcgcttaatg caacatacac cctgggatga
      241 aactctccat tgcttatgac cttgtacctt gaatgtcttt gtgaacctct gcttctatac
      301 gtatgtacca taaacatttc ccctctttga atatatgcaa taatcctatc tacagccaca
      361 tgaatactgg ccctccatat tattgtaatg ctaacctcca gactgcatgc ctgatagtca
      421 atactttatc acagctttgc cttttttatg ggtctggtgt ctctttaaaa tgattgcccc
      481 tgttttgatc tgattaattt tgtgtgagca caaacaatta cttttcatct ttatctgctc
      541 aaggaatcac ccctttttat gggtatcatt tattacaggt ggacagctac ttgtttatta
      601 gaatttcaag cagcctatcg cagccgagat ctcccgtggt ctat
//
LOCUS       KCHQ01000758             255 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 85818cha ultra-conserved
            element locus uce-234, sequence.
ACCESSION   KCHQ01000758
VERSION     KCHQ01000758.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 255)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 255)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85818cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>255
                     /note="ultra-conserved element locus uce-234"
BASE COUNT           71 a           51 c           61 g           72 t
ORIGIN      
        1 cggtgaccca caaatcgctt acccatcaaa cagactcatt acgagccggc aagcagatga
       61 gtgtttgtga gccttgcctc tgagcggtgg ggattgtgtg tattaccgct aacacggctg
      121 aggtatttaa attttgattt tttcgtaatg ggttttgaca tgtttcattt cctctggggg
      181 aagcgctcga gacctccgaa agtaaatgtt gctaaaaagt catcaaggca gaatattaaa
      241 atgccatcaa ataag
//
LOCUS       KCHQ01000759             406 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 85879cha ultra-conserved
            element locus uce-235, sequence.
ACCESSION   KCHQ01000759
VERSION     KCHQ01000759.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 406)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 406)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="85879cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>406
                     /note="ultra-conserved element locus uce-235"
BASE COUNT          106 a           78 c           91 g          131 t
ORIGIN      
        1 ttcactgcat gtatgtgtgg cacatgtgtg ctatttttat atggggatgc tgtgaaagtg
       61 tggaattggg gacaagggag ccttgcaccg ggccgtgaca cagacttatg ttaaacctaa
      121 ttagatcatg ataatagctt tagggcccca gtgatcaatg ctagaggtct gtggagatga
      181 actttcctta agtttcatgc tgcatgctgg ttgtactcaa tttttttgtc tcacacacgc
      241 gcgcacacac actcactcac acacagacac acacatacac taaaagtggt ttaaaggcac
      301 tgtgctatat acgatagcat tatcttaaat aattttctgc atgttctctg tcagtttcat
      361 ggtttgtcat tctattgtta ctagtgaatg agtacagtgt ggttag
//
LOCUS       KCHQ01000760             583 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 86061cha ultra-conserved
            element locus uce-549, sequence.
ACCESSION   KCHQ01000760
VERSION     KCHQ01000760.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 583)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86061cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>583
                     /note="ultra-conserved element locus uce-549"
BASE COUNT          122 a          150 c          113 g          198 t
ORIGIN      
        1 ggctattctg tctttccatt cagtctcacg agtgctttcc agaccttgta atcttaatta
       61 aatatgcaac ttttgatcgc aacagggtca ctatttttgc atttaaatgt ggtcacagac
      121 ccccacccac ccattcagat gagagaaaag gcagacattt tgaatcttaa tgcaaaaaaa
      181 ggagaaaaga acaaagaccc gaattgagtc gctccttttt caatttccct tgttagcctc
      241 ctgctgcatt ccccctatag ttttttctgt ttttttttcc agatgaattt tatgatattt
      301 cccctcccct ctcctcccct cctctccctg tttctctcct ctctctcact cctcggcagt
      361 tttccccaga caggttccac agtgttttag aggggatgga tttaattgct ctgtggggat
      421 tggttggctg tgccgggctc ggctgtttaa ttagtgtacc ctgccgggat tggtttaatg
      481 cttcatgatc ttgaaattgt ctgattgttc agccctctgg ggactctccc tgcctacgta
      541 ggccagcagg tttagctaaa cattgctcca ggcttctgct gta
//
LOCUS       KCHQ01000761             261 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 86159cha ultra-conserved
            element locus uce-230, sequence.
ACCESSION   KCHQ01000761
VERSION     KCHQ01000761.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 261)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 261)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86159cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>261
                     /note="ultra-conserved element locus uce-230"
BASE COUNT           39 a           76 c           54 g           92 t
ORIGIN      
        1 ccatgtcgcc tgtctattct gtgcttgtgt ggagattatg atctttgtat ttcactttca
       61 cttgtctttc ttttctttgt tctgtctgtc tttttctccc cgctctctct ctctagttgt
      121 gtgtgagaat agagaagaac cctggtcttg gtttcagtat ctctggtggc atcagtggcc
      181 aggggaaccc cttcaaaccc tccgacatgg tacgacccga cctggcctgc cagccaatca
      241 cagcctcccc ggcttttcct c
//
LOCUS       KCHQ01000762             336 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 86247cha ultra-conserved
            element locus uce-231, sequence.
ACCESSION   KCHQ01000762
VERSION     KCHQ01000762.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 336)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 336)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86247cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>336
                     /note="ultra-conserved element locus uce-231"
BASE COUNT          103 a           43 c           65 g          125 t
ORIGIN      
        1 tctttttttt tttttggttt tgtttttgtt aacttgtaca ctgtgcaagg ttgaattatc
       61 ctgtacagac tgtaaaatgt aatattattt tgtacaactt aattgaaaga aaaacaaatc
      121 tacttgtaga tctttgtgcc ttgattatgg ctgtacctgt aaatgagctc agatgtaagt
      181 atgttttcga ctgcgctgta cagcttgatg tcaatctcta tcagcagcag aagactgcgg
      241 gtaggggact ttctctgtag agtttagttt tttctggttt ataaaaaaaa aaggaaatgc
      301 tgtttagtaa aaaataaaaa atagggaaaa aatcct
//
LOCUS       KCHQ01000763             806 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 86349cha ultra-conserved
            element locus uce-546, sequence.
ACCESSION   KCHQ01000763
VERSION     KCHQ01000763.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 806)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 806)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86349cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>806
                     /note="ultra-conserved element locus uce-546"
BASE COUNT          219 a          152 c          230 g          205 t
ORIGIN      
        1 ctatcacctt catcagcact cacagagagg gacactgact catgggaggg aaagaggcgc
       61 aatagggaat gagcaggcta gttcaaaagg cctgacgtta cagtgaaagg aggctagaga
      121 aagtcatctg ttaaggagtt tagagttatt tcaatatgaa ggaaaagaca ggatagagag
      181 catggtgctc aagcataatc agaactaaag gtgttgccat tcaaattcta aatgaaacta
      241 ctatgccatt ttacccgagg ccagtcggtg ggttgtttgt tttgcctcag ggaaaaacag
      301 cagtattcat ttctcgattg taccgtggta actctgacat ttgtagcggt gtccagtgag
      361 cagcatgagg tgtattggca gatagagagc agagggtggg gcggggggtt ggcgtggctg
      421 gtggtctgtt gggctggctg acatctctgt ctcctcctct ctcccggcag ttcatggcat
      481 caagtggact tgcagcaatg ggaacagcag ctctggcttc tcagtggagc agctagtgca
      541 acagattctg gacagccacc aaactaagcc acctccccgg actcacaact gcctctgcac
      601 aggcaccctg ggtaagggct agtgggtggg atggaggtag ttctcaagag agaactggaa
      661 aattcagcaa gagaaacaaa aaggccataa aatactgtgt gtgagaaggt ggttgaggtc
      721 tattggtatt gatttatagt gaaattgagt ttcgggatta ttggtttgtt atttttcttt
      781 actgataact gtgtcagagc catatc
//
LOCUS       KCHQ01000764             562 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 86443cha ultra-conserved
            element locus uce-547, sequence.
ACCESSION   KCHQ01000764
VERSION     KCHQ01000764.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 562)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 562)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86443cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>562
                     /note="ultra-conserved element locus uce-547"
BASE COUNT          182 a          114 c          131 g          135 t
ORIGIN      
        1 cacatcacag agccctacaa acggcaatta aaacggatgt gctacactgg ctctgtatgg
       61 gagagagaga agagagcgaa agaaaagaga aatgagaggg gacatgagtg agggagacag
      121 aaagatagaa agaaagagag gaagtatgcg agggaaaatg tacagcacca cctctccttc
      181 aaaaccatga ctgataccgt gtctattgat ctttattaca atagcagcaa gctgtaaaat
      241 gtttgatggt tttgtacaga tcttagtccc cctcattcat aattactgct acacatgtag
      301 aaccaagggc aacttcagaa ggggcgctgt ttgaaaagct gctgccagac tgtagggatg
      361 atgggaaatc tcgacggggc ctcgcggtag ctccaagccc taaggctatc attcctccta
      421 ctgaacacct gcagcaactt aagttttaca aagatcaaat tatggagctg atttcaaata
      481 agaaatgaga ccaaactcgt cccttttacc cacaaagtaa ctgctttatt ttgatttctg
      541 actttggtgc tgagactttc tg
//
LOCUS       KCHQ01000765             680 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 86543cha ultra-conserved
            element locus uce-540, sequence.
ACCESSION   KCHQ01000765
VERSION     KCHQ01000765.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 680)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 680)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86543cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>680
                     /note="ultra-conserved element locus uce-540"
BASE COUNT          177 a          173 c          177 g          153 t
ORIGIN      
        1 ccaccagcta caccggctgt cacccataca tgtaatataa atgaaatctc actttttctc
       61 tgtgatatat accatctcag aggggcagac acacacgcac acacactcac ttttgaatac
      121 agcaccatac agacagtcaa taacagaatg gggtgtgaga ttaagcctaa gcccaccttc
      181 ttttcatgtg gcagagcagc cgctgccccg agatctggca ccagatggcg ctgtgccggt
      241 cggtgccagg agataatcgg gacagatcgg gccgcattac tacccattat cttctaatta
      301 ttcttgtgtg gagcgctgat cctgccgttt gtgtaagtgg atggcacaga gagcctgtcg
      361 cccccggcag cacgaaaatc ctccccactt ccctcacccc ctctggggat agagggagag
      421 atcagccggg ggaggaaaag agggagggga gggagggagg agctggtggg taaggcagcc
      481 aacctgatag aggggagata agcctttgtg agatttaaca catcgtccaa ttttcataaa
      541 gtggcaccga tgatgtgagg ctgaggagaa tctgctgacc tttgacccct gtgttggtgt
      601 cacataaagc agcaacagct tgatctctga caaaccaccg tgagtacctc cttctcctct
      661 gatgactcta taaaagtgtg
//
LOCUS       KCHQ01000766             268 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 86643cha ultra-conserved
            element locus uce-541, sequence.
ACCESSION   KCHQ01000766
VERSION     KCHQ01000766.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 268)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 268)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86643cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>268
                     /note="ultra-conserved element locus uce-541"
BASE COUNT           73 a           58 c           58 g           79 t
ORIGIN      
        1 tttttttccc cccctcctcg ctccctctct cctctctctg cgctcctcaa ttaacagaat
       61 cgtttccttt caactaaaat gaatgttatt gaaaccaatt agcatggact ggaaaatctc
      121 tcgttaatga ggggagtgtg ggtgagtaaa caggaatgaa aagatgaaat tagagaagag
      181 gctcttcttg ttggcctgga ataatgacat gcttagtcgc ctaattgtct agtgaaaagc
      241 accgctgcga tagtaacaga ttgcggtg
//
LOCUS       KCHQ01000767             372 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 86868cha ultra-conserved
            element locus uce-322, sequence.
ACCESSION   KCHQ01000767
VERSION     KCHQ01000767.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 372)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 372)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86868cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>372
                     /note="ultra-conserved element locus uce-322"
BASE COUNT          114 a           58 c           63 g          137 t
ORIGIN      
        1 ccttactttt tggttatatg agaagcacat ggttgaaaaa aaaggttcca tctttcataa
       61 gcctgttgag tttgtgggtt atacacaaac acatatactt gtcgacatat ctgaacaccc
      121 aacagaagtt gaaatcctct tatttaattt ggatttatcc ttttcatttt tgatttcaca
      181 ttttttcact ttttttgtac atgcaacatg cactatagaa ttgaacagca tgggggaaag
      241 gataagtcca tgtatccaca gattgtaaga tctagtcaag actttgctgt gtttatgaca
      301 atgccctttg tattatatta agacagtctt atgtatgata tataaaaaga agttaattga
      361 attgctctgt gt
//
LOCUS       KCHQ01000768             556 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 86933cha ultra-conserved
            element locus uce-338, sequence.
ACCESSION   KCHQ01000768
VERSION     KCHQ01000768.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 556)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 556)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="86933cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>556
                     /note="ultra-conserved element locus uce-338"
BASE COUNT          166 a          120 c          108 g          162 t
ORIGIN      
        1 caaatgaaaa aaggaacaaa gggaggttga agagatgaga gaggagaggg acaggaatgg
       61 tcatgtgatc aagtgaagtc attcagataa cttcaatgtg agcttgagcc aacttcacca
      121 gctaagtgag cattaatcag tgagttatta acaatacgtt cagggtcaaa tcattggtgt
      181 tatgtagagt tcaaagcatt tcaattcaaa gtgagaatcg cttccgcata gctcatagca
      241 cataccacta caccatgtgt atttcaagac aattccaaca ataaggttgt ctctacctgt
      301 ccttgtacag tggggacggg agaccaaaag tatgatgagt tgaaatggga atcgtccatt
      361 atttctgtaa ttaaaaagca acacacttag aaatcacccg tccttctcct cctcttcctc
      421 cttcctacta agctcttctc tttgtttttt tactttcatg tgaaacgaga ccatgcatgg
      481 ctgcgtttca atcatcttag tttgcttcct ttccatatat cctctcctct tatcacctga
      541 cgcactgaac atgccg
//
LOCUS       KCHQ01000769             373 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 87026cha ultra-conserved
            element locus uce-337, sequence.
ACCESSION   KCHQ01000769
VERSION     KCHQ01000769.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 373)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87026cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>373
                     /note="ultra-conserved element locus uce-337"
BASE COUNT          111 a           66 c          106 g           90 t
ORIGIN      
        1 ctgtggtggg tttgagtgat aattttggct gaagcatcac cataaacact aataaaatta
       61 agtgcgtcgg agtgaggagg gggcgtggcc aggcgtccct ttgaacagac cctgtgatca
      121 gttcccctct caattagcgt attgtccact tgtcctttaa gctgggaggg agggggcagt
      181 ctccccccta gcttcccttt gaagtgatta tccctttatc tcaagcctga gcgaggaata
      241 tcttggggga caatggcaaa ttaaagccca tatggagaga agcgtgaatg tctgtttgta
      301 ggctcagaga aatataaaaa aaagaagcga tagagaaata aatagagtta ggagagagag
      361 agagagagag aga
//
LOCUS       KCHQ01000770             330 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 87113cha ultra-conserved
            element locus uce-336, sequence.
ACCESSION   KCHQ01000770
VERSION     KCHQ01000770.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 330)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 330)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87113cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>330
                     /note="ultra-conserved element locus uce-336"
BASE COUNT           92 a           83 c           65 g           90 t
ORIGIN      
        1 taaaatgctt aaaggtattt ttttcccata tgatccttgg caatggctag tttttttttt
       61 ctgtaacata gcactattta taatcagaaa ctctagtaag acatgaagct gatctcgaag
      121 gcttttctat aatccctccc ctggaagtgg tctttattgg aaggctagtt tgtgatgctg
      181 ctcccccagc agactacacc atagaacaag gcagaggcca caacagagtc atagaaggtc
      241 ttcaggagtg ccccacacac cccaaaagac ctcagacctc acacttgccc actgtggctc
      301 tttaccgggc agggagcatc taccactaga
//
LOCUS       KCHQ01000771             691 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 87211cha ultra-conserved
            element locus uce-335, sequence.
ACCESSION   KCHQ01000771
VERSION     KCHQ01000771.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 691)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 691)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87211cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>691
                     /note="ultra-conserved element locus uce-335"
BASE COUNT          179 a          163 c          174 g          175 t
ORIGIN      
        1 tcggaaaatg catgttgtac tgtcgagctt taacagcttg gatctcattc caacatgaat
       61 ctgttacatc aggtatagcc acattacatt acgattacat acatttcaaa gaatttatcc
      121 atcattttcc tccataaacc ttcgcgtcca ggatgtgagt taatttggac tcctggatcg
      181 caatctgcca accttagggc acccaaagtg cctactagat cccctatcaa aacaatcatc
      241 agctgaagga ggttatcgtt gggctgggct atctgtcacc cggccaccgg cagccagcgg
      301 gacacaaggg ccatttaatt aggcctactg ctcctctctg gtgtgaaaga ctctcaggcc
      361 cctttgattc cccactgctc tcccagcagg aagtggttgg tgataattga cacaggattt
      421 ccttgttaac cagcggcaga ctctgtggat taaagtgaca gagatctcca gaagaaagtg
      481 ggtagtagat aagggggagg ggaggaggtg cagtgggggg agtggcgggg gcagcagcta
      541 tttaccactc ttgagaaacc agggaggaaa tagcaatatc agactggtgc gcggtcctgc
      601 cgcgagatgt agctcccact tatcttagcc atttcagctt ggctgatcaa agattggctt
      661 tccttaaaat aacctgggcc caaggttgag t
//
LOCUS       KCHQ01000772             445 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 87402cha ultra-conserved
            element locus uce-333, sequence.
ACCESSION   KCHQ01000772
VERSION     KCHQ01000772.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 445)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87402cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>445
                     /note="ultra-conserved element locus uce-333"
BASE COUNT          139 a           98 c          106 g          102 t
ORIGIN      
        1 gtgacaaaat ggcctacagg cctcatctgc gcatacaaag tgttggagca cagtctgcaa
       61 tcacataaaa aaatttattc atggtgtgat aaggtttgaa ttttgtgtct cgaagccagg
      121 cgtaaatgtc ttcccattaa cagaatgtcc gtgttaatgt aactctgctc tcttatgcat
      181 gacgcaaata gtaagggatc agcggtaaac gaggccacgc attgtctgcc ccccgccctc
      241 cctctgcttg tcaggaagca agctgattgg ccgaggccta gcaaagggtg cccggggatc
      301 caaaactgca ggccgcactt agcttaccgt caaaaataaa ccaaaacaat aacagacaaa
      361 actgagaagg gggagaaaca ccgatagagt ctgaagacga cgttatcagg taaaattatt
      421 ttgaatcggt tagaaaggca tatgg
//
LOCUS       KCHQ01000773             215 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 87497cha ultra-conserved
            element locus uce-332, sequence.
ACCESSION   KCHQ01000773
VERSION     KCHQ01000773.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 215)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 215)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87497cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>215
                     /note="ultra-conserved element locus uce-332"
BASE COUNT           68 a           37 c           38 g           72 t
ORIGIN      
        1 ctgattttct tttatattta tgctggaata tttaattgta gacaaaaggt tactctgggc
       61 tctattcatc gcacacaggc agaataatct cctttaaaag gcttgacatt tcaggctttt
      121 caaaaggggc tgaaaaaatt atatccccgc ttttgttaat caatgaagta gaactccccc
      181 gaacaaaaga attaaattgc ttggttgggt taata
//
LOCUS       KCHQ01000774             238 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 87595cha ultra-conserved
            element locus uce-331, sequence.
ACCESSION   KCHQ01000774
VERSION     KCHQ01000774.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 238)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 238)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87595cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>238
                     /note="ultra-conserved element locus uce-331"
BASE COUNT           77 a           45 c           63 g           53 t
ORIGIN      
        1 gccagacact ttcttaagct aaactaaatg ggctaattaa tctgggctaa tggtgggtga
       61 cagcaaatat gctagcacaa ttatcaccct attaaagatt catattccaa cccataattg
      121 aaaatgaaaa ggtggggtga agggaggaag gtgggagtag gtccagcaga gtggaagatg
      181 agagtcattt ttctcaggta gcaggagtca ggtgccggcc ccccagactc aaaaccga
//
LOCUS       KCHQ01000775             211 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 87694cha ultra-conserved
            element locus uce-330, sequence.
ACCESSION   KCHQ01000775
VERSION     KCHQ01000775.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 211)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 211)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87694cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>211
                     /note="ultra-conserved element locus uce-330"
BASE COUNT           54 a           43 c           53 g           61 t
ORIGIN      
        1 gtcagaggcg ggggtccctg ggagaaaagg gccgcatttg gctgatcatt tatcaatgtc
       61 agccgcataa tgattctccc tgcagtcccc ctattgatga ggataattac attagctcag
      121 agtgactgat caataaagcc cagggaaaat ggtttattat agcaccaccg aaaaggcttt
      181 ctttaggagg ggactggctc tttttttttt t
//
LOCUS       KCHQ01000776             693 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 87793cha ultra-conserved
            element locus uce-1259, sequence.
ACCESSION   KCHQ01000776
VERSION     KCHQ01000776.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 693)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 693)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87793cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>693
                     /note="ultra-conserved element locus uce-1259"
BASE COUNT          193 a          161 c          151 g          188 t
ORIGIN      
        1 aaatatgtgc gctgtgatat tgatggtatt gctgctgtaa agccatctgc agcctgagag
       61 cagagagact gttactttgt aaaatgaggt gaggtctatt aaaggaagtg tattatataa
      121 atgtgtgaac tgtgttgttg tgacattatt agaggaggac catcctgtca gcgagacccg
      181 tacaacagag aacacagatt cacagtgaag cactgatggg cactttaaca aagaatgtgc
      241 acatcatgtg agagtcacac tccagcaggt catacaatac agtctcccct ctatctctct
      301 caccctcact ctctcactct ctctcccgct tgcagagtct atagaaccat ctcccgtgct
      361 tcagggcttt tcaatgtagt tattcaagca gaacacaact gtgtgcctcc atctgataga
      421 aggttaagga cctcttcact gctcacaaaa aagcccgcca cacagaggtg aggccaggct
      481 cacctcaggg aagaaatctt tctctgtcct cctcctcctt ctctttcact cttccttttc
      541 tcctggctcg gtgaaaagaa aggttcaaag gataatggct gtcttatcac tatgtaaaag
      601 gggaatggga actccagtga agtgcctggc cttttgtgac aatgaagaaa agagcaaaag
      661 tctatttcac tgtggtatat gcactggaac agt
//
LOCUS       KCHQ01000777             683 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 87873cha ultra-conserved
            element locus uce-1254, sequence.
ACCESSION   KCHQ01000777
VERSION     KCHQ01000777.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 683)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 683)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87873cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>683
                     /note="ultra-conserved element locus uce-1254"
BASE COUNT          127 a          172 c          149 g          235 t
ORIGIN      
        1 ttcacatcgt ttcttcccgc gctctcatat gcctgtccct tcctctcttt ctctctctca
       61 ctccaggctg ttgtttcttc tctcttcacg agggtcgctg ctctcgtttt gcatagtttt
      121 gcttctctgc gccgactgtc ctcacaggct gcctggctgg cctgggtgtt ggggtgataa
      181 tgactcctgt tctgtgtatg gcactggtag aattcactgt gagagctcac tatcagtgaa
      241 ttaccatagg gccataaaca gagcagagaa agaaccactt gatgatgccc gtcctggctg
      301 cctctggctc tcttctcctg tgcttgtggg tggggtgaat gtgatgtaat gactggtgcg
      361 gttgcatgag ctgagtctcg ctggatactc cgacatgtgc ttctataaca acaactgctt
      421 gcatttggat gccccagcca ttcctcttct ttgcccattt tggcactagc acatttttgc
      481 ttctgtatat atactttgag caattatgtg tagtgccaat ataggacaag acagacttcc
      541 atcgctttcg cataatcgtg gatataatct tgtctgtatt agtacatgtt ttggtgtcat
      601 gactgacctc tgaattctcc tcactgtccc ctgtatttcc ttgcgtatac gttggtcttc
      661 attacataac tgtgcaagat tat
//
LOCUS       KCHQ01000778             447 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 87901cha ultra-conserved
            element locus uce-1255, sequence.
ACCESSION   KCHQ01000778
VERSION     KCHQ01000778.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 447)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87901cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>447
                     /note="ultra-conserved element locus uce-1255"
BASE COUNT          115 a           92 c          106 g          134 t
ORIGIN      
        1 ctcgtattta ttcatttatc tatcattctt cttaattcca gtttatcttt tgggaattgt
       61 tcaaggcctt ttgtttcact gtatgttatt ccccccctcc tcctgcagta gccactgctt
      121 ttctgcttca gctgagaaaa gggaccagtc atgaaccatt taaccatggg aaagcaggag
      181 ggcccctcta aactggtatt tctgaaccaa tctaggtagt gtattcgaat tgcagagtaa
      241 caaatggaca gtggaagggg tttgtaatgg tgattagagt ctgaaattgg ttcagattta
      301 cagtgtcagt cagagatgga gagagaggaa taagcagtct aagcggtcta atggatccat
      361 cagcttgctt cggctgctca gtgggccgag tggggtcacc agccatccgc aggcaccaca
      421 aaagcacttc aattttgtta ggaaatg
//
LOCUS       KCHQ01000779             545 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 87963cha ultra-conserved
            element locus uce-1256, sequence.
ACCESSION   KCHQ01000779
VERSION     KCHQ01000779.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 545)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 545)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="87963cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>545
                     /note="ultra-conserved element locus uce-1256"
BASE COUNT          175 a           98 c          105 g          167 t
ORIGIN      
        1 aatcaatagc tgcttaaaat tcattgccag gcaatccatt tgccctttat gttgctaacc
       61 tttcacttaa atatgcacca tattaagatt tcattatata caatgaatgt cacaacagtt
      121 tgcccactat ttctcttgtt tgcatgggtt aactgcaaat cattgtgctt gtaatgtctg
      181 aaaaatgact ttcattaaca ttatgtggga aaaaaggaaa gtatatgagc ctgaatagct
      241 taataggtat taaaaggcac cacaggatat gtatgatgtt tgagatacaa aggcttttca
      301 acagactggg tgggctgcat gtgtctgacc acagttatga aaacacggcg cagcacaaat
      361 ataaagtgtg tactggtgct gcactccaca ccacagtact ttgttcatag agaaaaatca
      421 ttactgcatg tagaatcgtg tttgagagtc gatccttaaa ggaaacagct ttctaagaaa
      481 aatgtttact tgtgataaaa aatgctgtgt cttccttcag gcacagcagc ggtactttca
      541 agtag
//
LOCUS       KCHQ01000780             225 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 88055cha ultra-conserved
            element locus uce-1257, sequence.
ACCESSION   KCHQ01000780
VERSION     KCHQ01000780.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 225)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 225)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88055cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>225
                     /note="ultra-conserved element locus uce-1257"
BASE COUNT           74 a           45 c           44 g           62 t
ORIGIN      
        1 gtctccacaa tctactataa gcaggttaag taaaaaggat gatggccagg gctttcattg
       61 cttccaatta aaccttgctt gttagtttaa cctctaggta aacccatcaa acaattgatg
      121 tcaaggaaac cctgccaaca gtgggcctcg cctgaatggt cattaatttt aattgcctag
      181 atattaaaga tttagagcac aaagacgtgc aggatagaaa tgatc
//
LOCUS       KCHQ01000781             327 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 88323cha ultra-conserved
            element locus uce-1252, sequence.
ACCESSION   KCHQ01000781
VERSION     KCHQ01000781.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 327)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 327)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88323cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>327
                     /note="ultra-conserved element locus uce-1252"
BASE COUNT           55 a           90 c           60 g          122 t
ORIGIN      
        1 gtcttcctct ttttctctct aatatgcctc aacatctgtt gtcaagttca catatcctca
       61 catgtactca cacaccaccg cccacaaact ctcatgttgg tataggttgt tgtttttgag
      121 ttgtgttttc ttcttcatgc tttgcctgta cccttcttga gtaatgcagc tgctaggtca
      181 gggtctctcg tgattgctct cctccagcct tgttgctagt ctttatgtta ttctggtttg
      241 tcccttctta ccctgctgtc ttctagctgg actcaagggt aagtgcttcc ctgtagccgg
      301 cacagctcag ataatccccg ctgatta
//
LOCUS       KCHQ01000782             300 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 88409cha ultra-conserved
            element locus uce-1253, sequence.
ACCESSION   KCHQ01000782
VERSION     KCHQ01000782.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 300)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88409cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>300
                     /note="ultra-conserved element locus uce-1253"
BASE COUNT           78 a           62 c           99 g           61 t
ORIGIN      
        1 tgccctcgtg ggagctgcta caactgctca ggctatcaac aggggagcgt cccgagtcct
       61 ggcgggacga gggattctgg ggaggtggta ccccgccacc atagcccccc ggtgtgctgc
      121 tggtgcgatc tctaggagga gaaacaggtt cggacttgat gtgcaggctt tgagcagagg
      181 gcagggagag atttgaaccc tgacataagt gagagctaga gcaatttctg taggaaggaa
      241 aggaaacgca aggggttaca gaattacaga gcaagaattt aaagtgatct ttaagtcagt
//
LOCUS       KCHQ01000783             355 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 88499cha ultra-conserved
            element locus uce-1179, sequence.
ACCESSION   KCHQ01000783
VERSION     KCHQ01000783.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 355)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 355)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88499cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>355
                     /note="ultra-conserved element locus uce-1179"
BASE COUNT           78 a           91 c           94 g           92 t
ORIGIN      
        1 cacgatttcc aaacagtgct tccccaagtg caggtcgtgt cttttgttac ctttatgagg
       61 cgtaattaaa tgtgcacggc gtggcacagt gtttgagcag gaaccccagg cgtgccatta
      121 gccagatgtg gctgctcaat ccttaatgat agaggaacag aggcggagga gacgagccca
      181 ggagtccttc atcacgccat cccgaggtgt cgtgtgggcc taattgcccc atcgttttgt
      241 gcaccatacg agtccccatg acacctagct tcatgcattc attatgtagt ctcccagtgc
      301 tacttcaggc tgtggtgttc catgtataac cagaggtggg tggtacactg cagct
//
LOCUS       KCHQ01000784             245 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 88682cha ultra-conserved
            element locus uce-1175, sequence.
ACCESSION   KCHQ01000784
VERSION     KCHQ01000784.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 245)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 245)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88682cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>245
                     /note="ultra-conserved element locus uce-1175"
BASE COUNT           77 a           47 c           63 g           58 t
ORIGIN      
        1 gagagagaga gagagagaga gagttagcac gaatatggcc ctggcttctg atccataaca
       61 gtcattgcct gttacataca tttcagaatt cattcaggct atgaagataa tcgaggtagt
      121 cgacagtttc ccctgcagcc caatggattt atgatagcac tgtcaagaaa atgaggcgaa
      181 atgacacagt agctgacttt agctgcaaat aatgtgatag gccgtacagt ggtgcagcag
      241 cagct
//
LOCUS       KCHQ01000785             546 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 88773cha ultra-conserved
            element locus uce-1174, sequence.
ACCESSION   KCHQ01000785
VERSION     KCHQ01000785.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 546)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88773cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>546
                     /note="ultra-conserved element locus uce-1174"
BASE COUNT          155 a          130 c          119 g          142 t
ORIGIN      
        1 cagagagttc atggcactga aaatggctgc tttggcgcgg gctatgttat cagtggttgc
       61 tgctgtggct gctgctgcgg aggaggctgt gctgcccacg gtcctcttaa caccaatgtc
      121 cacacgtctt cgcttggtct gtctgttcag gagggagtcg ctgtcatggt ccggcatcac
      181 gggctgctgc tattgggcca tatcccacaa acccagtcct ctaggatcaa agcctttgag
      241 tacctgcggg caaaaattca cagatgcatg actcaccaaa ccgaaaaata ttttcagagt
      301 ctaaatcact cactcaggac atgtcataga acccttcagt ttcaaaacta aatttacact
      361 gaacggaaaa acttgaaagt tttgatagaa tgaaacgatc aaaaatctgt cagtctatac
      421 caataccaac aactgctcaa accgacataa tggacataaa ttgaagagtt ttgtctcaaa
      481 ccagttgaca gtcctccctc atatgtttat gcaaatgcag ggacgtccat atttagattt
      541 aggcag
//
LOCUS       KCHQ01000786             377 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 88867cha ultra-conserved
            element locus uce-1177, sequence.
ACCESSION   KCHQ01000786
VERSION     KCHQ01000786.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 377)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88867cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>377
                     /note="ultra-conserved element locus uce-1177"
BASE COUNT           77 a           86 c          112 g          102 t
ORIGIN      
        1 gagtcctttt gtttgatttg tacatgggtt ggaggggctg gctattggaa atccctgaag
       61 caggctttag gggcaggtct gattctcgtg tgaaatggga aggctctata gctctcggct
      121 gacttgactg gggctgtatg ggtgtgttgg cagggggagc gccggtcatg aatagggtct
      181 ttgactacct cagacttgcc ctgaaaggca ggacaaagac cctagggcaa cggcttagag
      241 cctcacagct gagctacaga atgcttggcc gagtcttcct ccctccttgc ctgatttaaa
      301 tactacagtg gctttcagca ttctggcggc ggagggaggc ttgcattcac cgcagcacat
      361 ttaccatcaa cttttct
//
LOCUS       KCHQ01000787             293 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 88956cha ultra-conserved
            element locus uce-1176, sequence.
ACCESSION   KCHQ01000787
VERSION     KCHQ01000787.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 293)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 293)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="88956cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>293
                     /note="ultra-conserved element locus uce-1176"
BASE COUNT          104 a           45 c           57 g           87 t
ORIGIN      
        1 ttattaatct aacaatgctt gagtactgta tttaaaatta accaatgcca gtgctgtgaa
       61 agttgtagtt gttgtcttca tatatagtca cccagcttac cttgtatgct gacataagaa
      121 aaaaaaaaaa gagttcatct atctatatgg atgtgtatga cttgcaagag taatcatata
      181 ccgaaaaata acacagaaaa gtttttttca tgtggacaaa acggacaaaa ctggtgttag
      241 cagtaatcag tagaagtgtt gaccacccag gagggaaggt tggactaacc ttt
//
LOCUS       KCHQ01000788             754 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 89052cha ultra-conserved
            element locus uce-1171, sequence.
ACCESSION   KCHQ01000788
VERSION     KCHQ01000788.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 754)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89052cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>754
                     /note="ultra-conserved element locus uce-1171"
BASE COUNT          195 a          182 c          165 g          212 t
ORIGIN      
        1 cttggttcag gcagatccac ctcgtttgac atgaggggaa taaaggctct ctcacgttca
       61 gggtcatttc ccagaaacat cgtttgtatc tgcacggctc ttcctctgtg cactcaaact
      121 tctttcatca acaggtcttg taaagtctcc agacaacatg aatgaaagat gcaattcaac
      181 ctcccttttt cccccctttt tccctttcga cctcctcaaa agtacaataa tcttcagtca
      241 ctcgtctcct cctctccatt gcgtggctgt gtgtagcacc ggagtggcgc tgattaagcc
      301 aacagagaga caaacgggag acaaagtccc agcccaccag tttagtttca catcctggac
      361 tggagctggg ccgcagcttg ccaagtggag ggcttttaaa ctgggctaaa cactaattgc
      421 tgccctattt cttttatgtt gcttctttcc catctgcgat ggtgcttcca gacctccaca
      481 gcagccagag cctcattata gcagacagtt aacaaaggct gggaaacaga agcggagaat
      541 tcacttagga tagctatcta accgccaact aggaggcctg ctcggaaaat tgaatcaatg
      601 acaggggccg gcttgtgatt aaatccttta gggatattaa gattttggaa atcttaatta
      661 ttcatctaaa tagttgcggc tcgctttgat aatggaataa atgggttgta aaaccgagaa
      721 gtgggatgtg atggccattg ttttatttta gcgc
//
LOCUS       KCHQ01000789             201 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 89145cha ultra-conserved
            element locus uce-1170, sequence.
ACCESSION   KCHQ01000789
VERSION     KCHQ01000789.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 201)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 201)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89145cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>201
                     /note="ultra-conserved element locus uce-1170"
BASE COUNT           57 a           40 c           33 g           71 t
ORIGIN      
        1 tgactcaaaa tcctccttta ataaggttca tgctgtctac aacttcatca ttttcccctg
       61 aatgataatt actttattca atcatgttca aggttttagt gaaagctagc attgattgat
      121 taacttcaat taccatgctt gcatttgcat agataaaaac tgcttttcaa tttgtgagtg
      181 gcacgcgggt ggaaaccctg c
//
LOCUS       KCHQ01000790             499 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 89239cha ultra-conserved
            element locus uce-1173, sequence.
ACCESSION   KCHQ01000790
VERSION     KCHQ01000790.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 499)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 499)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89239cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>499
                     /note="ultra-conserved element locus uce-1173"
BASE COUNT          146 a          105 c           82 g          166 t
ORIGIN      
        1 ttctgcctct gtgacagcgc tatctgacag cgttttacat ctcccctgct ctcccctcac
       61 tacactccac tgtcagacaa agaaattaat acccccagtg actgtgtttt aattaagcaa
      121 tttcatgcaa attacacatt ttagattgtc aaataatata ctgcgcaaaa ttgtaggcag
      181 gctgatctga tatgcatgga gtgttattct tccaggcact gtgcatacat agaaaatgaa
      241 caaaaatgct aatttctaat ctattatgca aacagtggag atacttacat agatttgcac
      301 gcctttctcg gataaataca gctcttgaat tctatgtata gaatgactgg gtttcttaag
      361 cagtctgcca ttgttattta tcttattttg cctttatttt aatcatacct ccttttactt
      421 tccaagcaat gtatactaat gtgctcgatc ctcacaagct ggggtctgtg cagcaggata
      481 acgtaaataa atagatatg
//
LOCUS       KCHQ01000791             355 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 89516cha ultra-conserved
            element locus uce-1075, sequence.
ACCESSION   KCHQ01000791
VERSION     KCHQ01000791.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 355)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 355)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89516cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>355
                     /note="ultra-conserved element locus uce-1075"
BASE COUNT          166 a           52 c           30 g          107 t
ORIGIN      
        1 cacctcaaaa atataacaaa aatctgatca aaattataaa aatcaattat acattccaat
       61 taaaaatata ccaataaaca gctaaataca ttgttgacct aataattaca atgcaatcaa
      121 tcacagtagc ttaaaataaa caaaataagc aaatgagcac aaaaccttta atgttttaaa
      181 aataacttca attatttata ttagtacaaa tagtttgatt tcttttcttt tttacaaaca
      241 ccagcatgaa aaggattaca ataacagtag aaaatgactg tgaaaaacat attaacatct
      301 tctttaatta aatgtctgca attaaaaatg gcattaaaga attacattgc aaaga
//
LOCUS       KCHQ01000792             368 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 89600cha ultra-conserved
            element locus uce-82, sequence.
ACCESSION   KCHQ01000792
VERSION     KCHQ01000792.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 368)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89600cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>368
                     /note="ultra-conserved element locus uce-82"
BASE COUNT          110 a           66 c           93 g           99 t
ORIGIN      
        1 agcgggccat atccttatgt gtaggaattg aggcattcct ttgagcgtga ggtgatgtcc
       61 tgcagctccc gctcttcctt cattttgatg tcttggtagg catgcatttg actggcatcc
      121 ttaaggtagg cccagtttgc tgagagaatc atgaggaagt ggatctggaa gagaagggtg
      181 aggtggatgg ccggtgagca tgtcaaagat gcaaagcaag ctacaggagt cagagctaca
      241 tcacagacat acaaaaacaa aaagtttttg gaaagactta acacacgagg gtgacaacag
      301 attactgaaa aagacttcac tgttgcattt attgtaacat tactgttaca atttttacta
      361 atactaga
//
LOCUS       KCHQ01000793             209 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 89698cha ultra-conserved
            element locus uce-1077, sequence.
ACCESSION   KCHQ01000793
VERSION     KCHQ01000793.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 209)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 209)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89698cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>209
                     /note="ultra-conserved element locus uce-1077"
BASE COUNT           44 a           59 c           34 g           72 t
ORIGIN      
        1 ctggctctca gcttcccctg tcttaacctg aagaattatg tgctcagata attagctctt
       61 ataggtacac tctccatttc tccactccac tgggcacatc atcttcctcg cctctttatt
      121 gtttggtttg ctttgtcaga tcgatgtctt gctactgcgt aaccagcact catatctcag
      181 gctgcataaa tcacaacaag gtttctgtc
//
LOCUS       KCHQ01000794             348 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 89796cha ultra-conserved
            element locus uce-84, sequence.
ACCESSION   KCHQ01000794
VERSION     KCHQ01000794.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 348)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89796cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>348
                     /note="ultra-conserved element locus uce-84"
BASE COUNT          103 a           82 c           63 g          100 t
ORIGIN      
        1 tgggttagtt tttttttcta tgtagagaat aaaggttaat aacagtcctt tcctgtgtca
       61 tatttgacat gaccagtcat cgcagtaatt acaatcatta cactccaaag gatgtctagt
      121 tatccctctt aaacacaggc cgcacaaagg aaatcaatta ttcaatcaga gctctcccat
      181 tcatccctgc ctgagttcac ttaattttgg gcctgggtga atctgccgca aataaacccc
      241 acgaccggag aagaaaagac gaacaggccc ctaatttgta ccctttcaga cggtcaatca
      301 cttttcaaag gaatgcaagc ttattcacgt cggcctgatt gtcagaat
//
LOCUS       KCHQ01000795             306 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 89966cha ultra-conserved
            element locus uce-1072, sequence.
ACCESSION   KCHQ01000795
VERSION     KCHQ01000795.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 306)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="89966cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>306
                     /note="ultra-conserved element locus uce-1072"
BASE COUNT           90 a           57 c           64 g           95 t
ORIGIN      
        1 ctgattaagc agaacattcc tggatagtta cagcccctca gtctatagtg ttttaatctt
       61 cctaaagctc attactgaac agcagcatgc attggaggga gttgcgtctt cttaggcata
      121 attccacatg gaactaatgc taaattggtc ttggttgacg gctgttgaat attaaaatgg
      181 ctgttgctgc ctcttcagac cttatttaaa ttggacagaa aagtcttttt ttcatcagac
      241 aacagtaaca gtttagcata agtgggtcga ggaaaaaaag gtgctgtttt ccacacatgc
      301 aaagat
//
LOCUS       KCHQ01000796             500 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 90061cha ultra-conserved
            element locus uce-1073, sequence.
ACCESSION   KCHQ01000796
VERSION     KCHQ01000796.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 500)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 500)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90061cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>500
                     /note="ultra-conserved element locus uce-1073"
BASE COUNT          189 a           88 c           98 g          125 t
ORIGIN      
        1 atgacctcgg gaggacatac agtaaactgg agcgtcacaa agacttcaaa caaactcatt
       61 aggagggcaa gatggctgca agcaagaaaa ccatcttggt gaaaatgaac aattaaaaaa
      121 cataaaataa aaataaaata taaacccgcg caaaaaatca cagaaaagga aaaagaactt
      181 acataaaagt atatactgac tgggcaaatg atgactacac aacatataaa gatgttgatt
      241 gttggataag ggtgcttacc ttgagattgt ctcttagacc ctagttgtgt tgtactctga
      301 ttcatgtttg ctcaaagagc caatgaggca gaacctgaaa tgtcacggct ctttcgttta
      361 atatcaaact ccttttgcat agagaggtca gaatgcataa tgtgctacat aacagcaata
      421 aacttcatta gtgctttact tgtttcaggg agccttgcat gcagactggt agaaaattaa
      481 taacagtcaa gaacactctg
//
LOCUS       KCHQ01000797             513 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 90159cha ultra-conserved
            element locus uce-88, sequence.
ACCESSION   KCHQ01000797
VERSION     KCHQ01000797.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 513)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90159cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>513
                     /note="ultra-conserved element locus uce-88"
BASE COUNT          121 a          102 c          100 g          190 t
ORIGIN      
        1 ccgaccatac tgatggtact gtagcttcat taactgatga tagcatcttc tggtggggct
       61 cctcagtgta atgggccaac tatagatggg tttgtttgtt cttgagtgag gaggaccatg
      121 cagttcctac agggacttaa cattagttcc attgagtgag tcgaccatct gcccaccatt
      181 aaccccagaa ccctccttct ctttacaggc tggacaattt gcttaatatg gcctatggcg
      241 taaagaggta attaaaaact tcacccaatg ccagatgtcc atgttgactc aatgattttt
      301 caatatcctt ttttctgttc tttttttagt ttatgtttcc ttgtattttt gcagtcactt
      361 tgcgtttgac aattcgttca aggtcagctg cattttttgt tctttgattt gtttgtttgt
      421 ttttcctcgt aagcttgagt tggttttaaa atcctaccaa ccacttaagg tgttgaaaaa
      481 agaaaacaat caatcagtct ttgttttcag tgg
//
LOCUS       KCHQ01000798             256 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 90257cha ultra-conserved
            element locus uce-89, sequence.
ACCESSION   KCHQ01000798
VERSION     KCHQ01000798.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 256)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 256)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90257cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>256
                     /note="ultra-conserved element locus uce-89"
BASE COUNT           59 a           46 c           96 g           55 t
ORIGIN      
        1 aggatggggg tgggtgccta tcggcggctg ctccttcctg aaacgtggcc acccgagcct
       61 gcctgggccc tggaagcaca tgtggaacag tttactgtaa tggaactcta aattagtggt
      121 ggtttgaagc tgcctgcagc agtagggtgt aattaactgg ctctgttgaa agagaaagag
      181 ccagaaagag aggcagggag ggagccagag ccctggaaaa ggcaaggggt gaggtgtgtg
      241 tgtgtgtgtg tgtggg
//
LOCUS       KCHQ01000799             423 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 90458cha ultra-conserved
            element locus uce-1079, sequence.
ACCESSION   KCHQ01000799
VERSION     KCHQ01000799.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 423)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 423)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90458cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>423
                     /note="ultra-conserved element locus uce-1079"
BASE COUNT          103 a           75 c          106 g          139 t
ORIGIN      
        1 tgtgcacgtg tgtatatgct gtgtgtgtgt ggggcaggac tggtgagcta ttatagctgc
       61 aacggcttgc agagatttgg aggttatctg tttttgttgg ttaattgtga agctgatagt
      121 atcgagggtc tgggccaatt cgagtgggct ttcagccaaa ttacctctgt aatcgtctgt
      181 attcaagtcc ctggatgctc tcaccaagac agagcctgga agccctgaag ttcagtggag
      241 aggggcagat ctgacctcag ctttagacag cttacactgt aattgaaatg atattttttt
      301 ccacaccatt attggattgc tgacaagatt tcacccaaaa ttccatttgt ggtcaattta
      361 tcctgtttgt ttttaattaa tgctggcagc taatgaactc agagggaatc ttagttaaat
      421 gat
//
LOCUS       KCHQ01000800             943 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 90548cha ultra-conserved
            element locus uce-936, sequence.
ACCESSION   KCHQ01000800
VERSION     KCHQ01000800.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 943)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 943)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90548cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>943
                     /note="ultra-conserved element locus uce-936"
BASE COUNT          287 a          163 c          175 g          318 t
ORIGIN      
        1 gatattgttt atgccttaga atgattgtag cattctattt tagtgaacgt gatgaaaaca
       61 ttatcataaa tattgtttgt acagtatata catatcctct gcaaacactg tggtatcctt
      121 aatcttggta gtgcctaccc ttccaacagg ggcatgtagg ggatgttatt gtttttagtt
      181 ttcattctta tgacattatt ttttttatat gatttcaatc caacaaggcc tccaaagttg
      241 gacagtgaca cagaaatcat tcctcaccat aaaagaaaaa aaggaacaac aagcattcag
      301 ttatgcttcc atgatgcatt tcctcgtaat ctgccacaat acagaggacc taaggccatt
      361 tgtaaccact gtgttgaacc ttgctgtgtg ttgtggcctg atggaggcag ctagattttt
      421 ttgtacccaa gtcaagagta cttgaagtta ctttatttaa gatattgtgg aataaaagta
      481 tcattctttt gtaggagctt tatttttcac tagtgtgtgg cacggaccta ttaaaaggat
      541 gtttttcaac gtaaatgact caaacttgtt ttatttcagt tctatcctac aaagctgctt
      601 tcattgaaag gggttgtggt agttctgtga tctgatttat tctctcaaat tagaaatcgt
      661 gtgtgcattt gtggatctga ttctcagttc agttttgagg tgtagactat tgcacaacac
      721 tgctgccaaa aacacaaatg tgaaactgtt tcaagatcct cattaagatg agcctaatcc
      781 aagctgtatt tacgtattta ccaaataaga gcatttcaat ttttaatgag atgaatcagc
      841 tgaagcagct catttaaact aaactgttgg cagcctgatt ttctctgaaa aacaaaaatc
      901 atgcagcttc caaatgcaag cagaagtaca gcagaaagga aat
//
LOCUS       KCHQ01000801             386 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 90637cha ultra-conserved
            element locus uce-110, sequence.
ACCESSION   KCHQ01000801
VERSION     KCHQ01000801.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90637cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-110"
BASE COUNT          103 a           81 c           86 g          116 t
ORIGIN      
        1 atgcttataa tctggggata tttgggggaa agtgttaatg ggcaatctgt tgtttatttt
       61 gagccgctaa caatgatctt tctgtggata aaaagcggtg tctggcggta cggttgagta
      121 atttttgagc attggctgaa acagatggcg tggagctatc agttctgccg ctcttctctc
      181 cctccctcga tccctccctc cttcttccat ttctgaggat agacacttca ctccctcgta
      241 cactgaaccg gcaccaagtg gaaacgcagg caaaggcacc acgttattga caaaatactt
      301 gagaaagaac acaaacaaaa atagagggaa ataaactgag tgttgtctct ttgcgttttg
      361 atgccattca taattttcat atatgt
//
LOCUS       KCHQ01000802             522 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 90726cha ultra-conserved
            element locus uce-1089, sequence.
ACCESSION   KCHQ01000802
VERSION     KCHQ01000802.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 522)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90726cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>522
                     /note="ultra-conserved element locus uce-1089"
BASE COUNT          167 a           98 c          105 g          152 t
ORIGIN      
        1 tgttaataac ttcctctgac aattcctcct catctttgct gatgaccaga gggacagccg
       61 tgattgtcat gtttgtaggg gaagaaagac tctaaacaat gatgtcacgt cagcctctct
      121 attaaaagac ttcatatttt gagcggcata attaatactc ttgggcacgt cgcttccaag
      181 ttggcactcc aggcaaaggg ctgccactca cctgataatt atttttggaa atggagccca
      241 aattacagtg attgacaaat gcaacaaagc agagacagcc tcaagcattc atgaagaaag
      301 aaatgagaaa atagttaagt ggttaatgca ctttcacagt ggatttaaag tttaaatcgc
      361 ttgtcctctc atgtctgcaa tgtaactttg gctagggtca aacaatttag cctgtatcct
      421 cttgaaggaa cacgctagaa ggcctttgca ggagtaatta acacttatca tttctgtggt
      481 aaaaaaaaaa aaaatggaaa agggttttat tgctatttta at
//
LOCUS       KCHQ01000803             309 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 90900cha ultra-conserved
            element locus uce-893, sequence.
ACCESSION   KCHQ01000803
VERSION     KCHQ01000803.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 309)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 309)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90900cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>309
                     /note="ultra-conserved element locus uce-893"
BASE COUNT           80 a           56 c           68 g          105 t
ORIGIN      
        1 ctgtgaggcc attgtcattt cagagagctt gtccctttat gttgcttttc ctgttagttt
       61 gaacaggaat gacagcgcag tctcagcgga cttcataaat gcattatgaa taattgagtt
      121 tgtgaagctc gagattgcag atggcactca aaagctgtca tttgtcttga cgtctcagat
      181 tgcttttact ctttaatggg cacattaccc ataaaagcac gatttactgc atctcatgga
      241 agttgtaacg atgttgcttt tttctgttta aaatggcaga ggttactttc agatgatgag
      301 tagcacaga
//
LOCUS       KCHQ01000804             654 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 90958cha ultra-conserved
            element locus uce-930, sequence.
ACCESSION   KCHQ01000804
VERSION     KCHQ01000804.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 654)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="90958cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>654
                     /note="ultra-conserved element locus uce-930"
BASE COUNT          203 a          122 c          132 g          197 t
ORIGIN      
        1 gcctagacgc gagcttcagt agtatcagaa tggatatgtt cagtgtgtag gagtgacaaa
       61 aggatccctt gcttaaagaa aaaaataaga ctttttaaac tgcagttcca aagtttctct
      121 taacccaaaa aattacagta ccaaatgatt gactcaggat tgtttttccc atattgatat
      181 gctggcaaga tattgattga tttttgttat ggacagaact gttgcagatg cttgactgag
      241 cttatattgt atacaaaaac atggagtagg aaaaaatccc acaggctccc ttgggggggc
      301 ttgtttcaag ccaaaaactc tcacgatagc aaattgcacc tcagctggat tgttttccaa
      361 atgctagcat gtactgtatg ggatgacgat ccagaaccct caaagagaat ctctcttagt
      421 ttagataggt gtaattcagt agctttaaat tctcaggtca gaacataaca tttctcattt
      481 gttaaagcag caacaagcct gggtacactt ggcttataac caaaacatgt caagctttat
      541 cggacgcatt tccttgatgt gtatagagta ccaagagaca atattactgt tacagtggac
      601 gatgtgcata tccttttagt tttgccctac aaagacagta tggttttgcc actg
//
LOCUS       KCHQ01000805             419 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 91028cha ultra-conserved
            element locus uce-933, sequence.
ACCESSION   KCHQ01000805
VERSION     KCHQ01000805.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 419)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 419)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91028cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>419
                     /note="ultra-conserved element locus uce-933"
BASE COUNT          113 a          110 c           94 g          102 t
ORIGIN      
        1 caccacctct ccatctcaca acactggatt aaattcaagg acttttagcg tcaaaggtaa
       61 ttgtaggctg ctgggctgca tgtgtgcata tggctgagag gtgtctgctg tatcagaaca
      121 actctaaagc ctctccaaca agccctgaac aaggccttca catgggctgt cacattggga
      181 gcagcgcttt agttccgctt cagtcctcct tggcattaaa aggctagaca aagcctcgcc
      241 tgcgattgcg atgccaacct gatgtggcaa tcaagaccgc gtccatgctt gcatgacaat
      301 ttccctccgg ccagtccaca ttctgtccga cttaatggcc acgtatgcag acaaggaaat
      361 aacacaacaa aagacttgaa gatgcagtct ggatatgtgt aatggcagat gcctttaca
//
LOCUS       KCHQ01000806             599 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 91129cha ultra-conserved
            element locus uce-1082, sequence.
ACCESSION   KCHQ01000806
VERSION     KCHQ01000806.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 599)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91129cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>599
                     /note="ultra-conserved element locus uce-1082"
BASE COUNT          154 a          153 c          160 g          132 t
ORIGIN      
        1 gcgagggcac acaggaagaa aaggcccggg cgtttgtgcc gagcagatta ccccactgcc
       61 ctgccaagtc cgcggcgcgc tgcatcctaa gatagaattc aaattcaaat gtgggctaaa
      121 gaaagtgcag ctgtcacccc tctggcctgc gaagccccaa ccggatcaaa gatgagctgt
      181 cctcctcccc tgcccgtgta aaaatgagct gtcctggccg tgccagtgtc tcgtccccct
      241 ggggcaccta atcctcctct cctgactcca cactgacagt ctgaataaag gcattaaacc
      301 ccgcaaaata attaccaatt aaaacggatg gagaagtcat caggtagtga ctggggggag
      361 agcaggcaga ggcggcagag agggatgaag cttcggtggg tttctctcct ccctgccaag
      421 aacaacctgt attttctcct ttatgggtta tggttttgca gttctggatg agtgagtgac
      481 cttacagagt ggtatcagac caggaacaga cttctgaaag cttcttggat gtcgaagaaa
      541 gtttgtgcga ggcatcccaa ctgtgcggaa gccagaaatc agtgccgaag ttttataag
//
LOCUS       KCHQ01000807             866 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 91322cha ultra-conserved
            element locus uce-934, sequence.
ACCESSION   KCHQ01000807
VERSION     KCHQ01000807.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 866)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91322cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>866
                     /note="ultra-conserved element locus uce-934"
BASE COUNT          256 a          169 c          144 g          297 t
ORIGIN      
        1 atttcaaatt caatacaaat atggattaaa acaatgaaat ttcacacata cagcatttgt
       61 ttctcatatc agttattgca aaatccatct gttttgacta aaataatgaa aaatagattt
      121 cttagtcaca tctctgatct gccagcgtga gcgaacaata cttttacctt ctctcagtgc
      181 tcaaactttt taaatgtcct ggaggacttc tagttcgagt cccaagccta ctgagatctc
      241 taatgaaggc tttaccttcc aggcaagcat atttctccaa atgacagtaa tttacatatg
      301 atgcatttag agaagaagag ggcaggctaa ttctatttag agattttcct ttgttttagg
      361 agtcattagc agctagctca aatctaattt ttacaatttc atcaggccat cttggaaagc
      421 ctctgtgagc tcatcagaga ggagcattta ttgctaagtg ttctctattg cattagcaca
      481 caataaagcg gccagggact gctacagacg tttatgtgga atccagttaa cactccgcca
      541 attcgttttt tattgggaca caatcaattt ttattcattt taaagccaga atgctttctt
      601 tcattgtgtg cctaccccag cttattatgg cctaaactaa ttactcagtt gttttcacaa
      661 aatgctaatg tttatgttaa agatttcctc tttgaaacgc aggtctgacg tgcatataca
      721 taatgtgaga ttttctatca catatgttct tcattatcgc acgcctccca cagtgttttt
      781 taggcctaat aattgcattt atttaatttg tagatgtctg gcagtaacaa ttaagtctga
      841 gtaatgacac acagtgtggc acattg
//
LOCUS       KCHQ01000808             234 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 91418cha ultra-conserved
            element locus uce-937, sequence.
ACCESSION   KCHQ01000808
VERSION     KCHQ01000808.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 234)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 234)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91418cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>234
                     /note="ultra-conserved element locus uce-937"
BASE COUNT           73 a           62 c           30 g           69 t
ORIGIN      
        1 acacacacac acacacacac agtgaaacgg tgaatcatcc cattttgtat tttgcagttg
       61 actgaggcca attccccata attcaataca gttgaaaaat gaaaccccgg taaatcgcta
      121 cagcgatttt acagatcccc gcttatcctc ataattcatt atttccaaac tgtaacaaca
      181 ttacatttca tttgtaatgc tccgcctgcc tcagccattt gccaattgtt atat
//
LOCUS       KCHQ01000809             312 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 91544cha ultra-conserved
            element locus uce-1201, sequence.
ACCESSION   KCHQ01000809
VERSION     KCHQ01000809.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 312)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 312)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91544cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>312
                     /note="ultra-conserved element locus uce-1201"
BASE COUNT          107 a           56 c           75 g           74 t
ORIGIN      
        1 aatattacct caagcaaggg gccaaggcca acaccggaac ctgactgagc agaaaatggt
       61 tcctgatact cacagatgag atctattata cattaaacat gcttgtaaat attcactagt
      121 ccgaccattc aaatggaaaa tatggtttag gtcaaaggtc tatgaaaatg ttgtctcctg
      181 aggaagtccc cctagaatag aggcaatgat gataacaggg agaaacaccc ataggggact
      241 cgggagaaca ttaagagttg ttttacatgt ttgactgtgg gacagcgatg ataccaggga
      301 gataaatgat gg
//
LOCUS       KCHQ01000810             213 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 91603cha ultra-conserved
            element locus uce-958, sequence.
ACCESSION   KCHQ01000810
VERSION     KCHQ01000810.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 213)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 213)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91603cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>213
                     /note="ultra-conserved element locus uce-958"
BASE COUNT           64 a           57 c           34 g           58 t
ORIGIN      
        1 gacacacaaa ccccaagcca gacacacaaa cacacgacct atatatacta tctggccttc
       61 tcatcattta tcttacagcg gcagaatcag gatagattgg ttcaattaga ctggccttta
      121 atgtaatctg tttaatccat ttctatcatc aaagccaata cctacctctc tccttggaga
      181 gtgggattag ctctccaagt gcatctcaga gcg
//
LOCUS       KCHQ01000811             264 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 91685cha ultra-conserved
            element locus uce-896, sequence.
ACCESSION   KCHQ01000811
VERSION     KCHQ01000811.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 264)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 264)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91685cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>264
                     /note="ultra-conserved element locus uce-896"
BASE COUNT           71 a           67 c           71 g           55 t
ORIGIN      
        1 cacacacacg cacgcacaca cacaggggag aggctctaat tagcggcaga aaggaataca
       61 atgagtgagt tattaagaca caggggcgga tcgcagccaa cctttgcccc ctgtcagagc
      121 acaggtcaca tgataagaga aggatatccg ccagacgacg gcgccaagcg gcctgtgccc
      181 actgaggaga tgaaataggc tcgatctcgc cggccattca gggcagacca tggtgcactg
      241 attggttttt tttttttttt ttct
//
LOCUS       KCHQ01000812             468 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 91763cha ultra-conserved
            element locus uce-202, sequence.
ACCESSION   KCHQ01000812
VERSION     KCHQ01000812.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 468)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91763cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>468
                     /note="ultra-conserved element locus uce-202"
BASE COUNT           88 a          161 c           87 g          132 t
ORIGIN      
        1 ttaccttgcg catgaccaat ccttccatct ctccctcttt ttttttcctc caccatccta
       61 tctatgcatg ctcttccctt tcttgaaacc caaccacacc taacagcaac accttgcact
      121 ctcccggcca tcccacagcc tacagcgcgg cactcacacc cccaataaat acagccctgg
      181 tcttccgttt tcccatctat ccctttttct ctgccccagt ctctttcccc tctctctccc
      241 tctctctccc tttctctctc tccctctgtc tttccctctc ccctcactcc tggctggtgc
      301 tggtgaaata tcagggcaaa cggattccag cttttttctc tggctcagag gggttgttct
      361 gtgcgatttg gccctggggt gcatttcagc gcttctgatg tgagagaggg ggcgagagag
      421 agagagagag agacagacag acagacagac ggatggacag acagacag
//
LOCUS       KCHQ01000813             256 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 91845cha ultra-conserved
            element locus uce-1108, sequence.
ACCESSION   KCHQ01000813
VERSION     KCHQ01000813.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 256)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 256)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91845cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>256
                     /note="ultra-conserved element locus uce-1108"
BASE COUNT           89 a           50 c           85 g           32 t
ORIGIN      
        1 caaacacaga gtcccccagc cttcaggaag gctcgactta ctctgatagg atgtacggat
       61 ccttttcttt gaatctgaat aaaagttaga caggccacgc atgcaaaact ctgtcaggca
      121 ggcccacatg cccacatcag cagccacaga gtcaccaaaa ggtgggagga ggaggaggag
      181 gagcaggaag aggaggagaa gaaagaagag gaggaagaag aggaggaaga gcaggaggaa
      241 gagcaggagg aggagg
//
LOCUS       KCHQ01000814             425 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 91939cha ultra-conserved
            element locus uce-163, sequence.
ACCESSION   KCHQ01000814
VERSION     KCHQ01000814.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 425)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="91939cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>425
                     /note="ultra-conserved element locus uce-163"
BASE COUNT          139 a          102 c           84 g          100 t
ORIGIN      
        1 ttttaaaatg ctgttcactg gccgtgctaa atcatactta attcaaaaac ggtccataaa
       61 gcaaagcctg cacaacggca agagaagcac agcgcctaaa gccagtgcac acttctcctg
      121 cctccattcc atgtcaccaa agcatcccat caaagcctgc ctccttcctg ttgtaaggta
      181 ggaaaaaaaa atcaatgctg caatcttttc tttttgcctc ctccaatccg taattgaaat
      241 ggaaaatcaa atgaacggca agcagataat tgttttatca atattccctg cctgccctac
      301 aagggtcagt gcagaatgat catgagtcgg ggatatgacg aggacaaaat gtgaaattga
      361 acagctagga ggcaataaat cagccttgac aactaagagt gaccagcatg tagctgcagc
      421 aggca
//
LOCUS       KCHQ01000815             262 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 92122cha ultra-conserved
            element locus uce-161, sequence.
ACCESSION   KCHQ01000815
VERSION     KCHQ01000815.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 262)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 262)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92122cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>262
                     /note="ultra-conserved element locus uce-161"
BASE COUNT           71 a           45 c           51 g           95 t
ORIGIN      
        1 cttaccttgt tatagaaagt ttaatgtcat atgcaattgt ttgaccctta tgaatattaa
       61 aggttcccat ctctgcccta ttaaaaatgc atgtggcatt gtggttgttg atcacgttta
      121 gaacgcccat gcaaattgga ctgtcttccc tgtcaaggcc taagatgaat aatgtagttg
      181 tgttgtatat tcagggacac accattgaca gtcaattaac aagtttgatt ggtgtgtgaa
      241 ctctttcttt tgaactgtta at
//
LOCUS       KCHQ01000816             446 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 92236cha ultra-conserved
            element locus uce-595, sequence.
ACCESSION   KCHQ01000816
VERSION     KCHQ01000816.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 446)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 446)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92236cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>446
                     /note="ultra-conserved element locus uce-595"
BASE COUNT          105 a           94 c          106 g          141 t
ORIGIN      
        1 gagcacgcgc ccatgcctaa cacggctgct aataggaaaa gatgtgtgga agtgtatgat
       61 ttatggttgc acgcaggcag gggtggaata atttggtgca gaacgggtac ttactgaacg
      121 gcaacaactc ggctacttat ccgtactttc tggtgataaa ttagctcttg tttaaagtag
      181 ccggagaccc atttttcatt ttgattacta cacttgatat ctctttcttt cttactctct
      241 ctttgtcagc agcggttctt agcatttttt gtgtatggtt tggtgtatgg tttatgtgtt
      301 tgtgtgtatt cagcccagcc gctggtcctt aacccctcag tgactggaca ccgcagcacc
      361 cttccatgta aaaacaaggt aacgctatta attgtgagga gacccaatat ggccagagtg
      421 acaaggcttt tctcattgac cgtgag
//
LOCUS       KCHQ01000817             253 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 92325cha ultra-conserved
            element locus uce-164, sequence.
ACCESSION   KCHQ01000817
VERSION     KCHQ01000817.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 253)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 253)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92325cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>253
                     /note="ultra-conserved element locus uce-164"
BASE COUNT           67 a           60 c           63 g           63 t
ORIGIN      
        1 ttctaacagc ccctgatgcc atacgtgcct ggaatgaaca atagtgtatt tctgcatgcg
       61 gccagtaggg ggcactgaca taatacagga ccctgccaat ctgttatgcc tggctggccc
      121 acagagatgt ttgcagtaat ttagttccac tgccaatata taaataggaa ttctgctgtt
      181 agcacaaaag agcggggagg ggggggacat actgccgaat gaatgtgaat tgctcccctg
      241 ctcccatttc aac
//
LOCUS       KCHQ01000818             295 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 92509cha ultra-conserved
            element locus uce-1101, sequence.
ACCESSION   KCHQ01000818
VERSION     KCHQ01000818.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 295)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 295)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92509cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>295
                     /note="ultra-conserved element locus uce-1101"
BASE COUNT           84 a           57 c           67 g           87 t
ORIGIN      
        1 tgtaaggcaa gaaagacgat acccatttgg ggctcattgg agcaaatcag aattgtcagc
       61 actgtgggtt tttacctttt taaacaggga agatggatag ataatcacca catgccattc
      121 tgggggccaa ttacacagct ttgtgtgaaa ttggaaaacc tgttctctca gagctctaat
      181 ggatgttctg gtcattagtt atttgagagt cttctctggc tgtaatcaaa cgtgaaacat
      241 tgcgttaagc gcccataaaa gaacagctgc ctctctaagt gaccttctgt ttaag
//
LOCUS       KCHQ01000819             281 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 92603cha ultra-conserved
            element locus uce-1102, sequence.
ACCESSION   KCHQ01000819
VERSION     KCHQ01000819.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 281)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 281)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92603cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>281
                     /note="ultra-conserved element locus uce-1102"
BASE COUNT           87 a           41 c           99 g           54 t
ORIGIN      
        1 caaggaaaag aaggggagtg ggcagtgaaa gacagggtga gagaagtggg ggagagagaa
       61 aggggagaaa gaggggggga gtcagcagcc tccagagtga tttatttgcc aaatcaggac
      121 acaatgagtc gattatgagt cctctaataa gagagagtgt ttggggaccc actaattggg
      181 catgattgag ttgcagtctg ggagccgggc gaaaagggaa cctggtcggt ggctgtcatg
      241 caatcatcag ctaatcagag ctttgaaatt aaaactgcgt g
//
LOCUS       KCHQ01000820             481 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 92732cha ultra-conserved
            element locus uce-1104, sequence.
ACCESSION   KCHQ01000820
VERSION     KCHQ01000820.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 481)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92732cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>481
                     /note="ultra-conserved element locus uce-1104"
BASE COUNT          127 a          115 c           88 g          151 t
ORIGIN      
        1 cgaccggctg gcatggccac agtaaatcct ggagactgct catgctagag acctcgggta
       61 attaataaaa tccccattac atgccttgtg cccgttgttt gctatttcaa caccccattt
      121 gtgccacgat tacagtcatt atcagtcacc gccattaatt ctctacccga tgccagaact
      181 gcatactaat aaattgggct ctaaaatttt ttttaccttt caaggagttg gtgttggagc
      241 agcgccagga agtgccactc cagattagga gtcatctggt gactcggaaa gagccctttc
      301 aattgagggc tgctgcatct ttggagatag ttcaaatttc ccctttgatt attttccttt
      361 cccctccaaa atgaatctct attaagctta aatcctgaat aaaatgaaat tagcagactg
      421 caaaacattg ctttcttttc tgactctatt cccttgtgca tgcatgcaaa ttataatgct
      481 t
//
LOCUS       KCHQ01000821             244 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 92801cha ultra-conserved
            element locus uce-1105, sequence.
ACCESSION   KCHQ01000821
VERSION     KCHQ01000821.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 244)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 244)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92801cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>244
                     /note="ultra-conserved element locus uce-1105"
BASE COUNT           66 a           42 c           74 g           62 t
ORIGIN      
        1 ggtgaagagg aagtcaattt cgtattctga acctggccga tgtagtcctc tgggatctgc
       61 ctccgcacct caggatctgt aaataattga cagataatat taattggctt tggattagtg
      121 agcaagctca gtatcacaca ttaatatttg atcagaggat gatagggacc ctggcagggg
      181 atccgaaggg gcagctgagg ctgttttgtt gattaggcca gagacgggag gagatggagg
      241 caag
//
LOCUS       KCHQ01000822             275 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 92891cha ultra-conserved
            element locus uce-1106, sequence.
ACCESSION   KCHQ01000822
VERSION     KCHQ01000822.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 275)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="92891cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>275
                     /note="ultra-conserved element locus uce-1106"
BASE COUNT           59 a           73 c           62 g           81 t
ORIGIN      
        1 ctcctctcct ctcatcgctg ttcttcccac ctcacccctc ctcacccttt ctcgcccctc
       61 cttcctgtag tctgtgtttg tgttgggaag attaagctgc tctgacaaag ctgtgtttac
      121 aaatatgcag gcagagaaac aggccaagcg acgctgaata ggaatagaat acaaattgct
      181 tttttatctc tcttagggcc agggcgagag aaaatgtgtt tgcgattgtt gctcctccgc
      241 ctgtgaagga taaagcctca gtactgggtt tgggc
//
LOCUS       KCHQ01000823             646 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 93059cha ultra-conserved
            element locus uce-764, sequence.
ACCESSION   KCHQ01000823
VERSION     KCHQ01000823.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 646)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93059cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>646
                     /note="ultra-conserved element locus uce-764"
BASE COUNT          195 a          152 c          155 g          144 t
ORIGIN      
        1 cctctgagtg ttaggtaatt ggagcgttgt acctcaagag aaaactgctg atttcatagg
       61 aagtgctaac aggacctttg tgtgccatgt ttcccttttc cagggagcca gtggggccag
      121 acagagagag ctatgggcct atagtgggaa cagacccagc catacctgag taggggcagc
      181 cacagcggta atgaacctct tcacatggcc gttcacccaa aaggaaaaga ggtggataaa
      241 gaaaggagga ctgagaaaga ggagggggtg cagcctaatt tcacagccgg agaatagcag
      301 gtgggacaaa aggtctagct tgaggagcag aggtgggggg gagctttatt agtggtattc
      361 tcctgcccca tttacaccat ctctctcctc ggcaatggag cacttatcac aagtgtaccc
      421 atccagctca ccaatagaaa caagcaaacg ctatccgtca atgtttacca ttaaggatct
      481 gtcatttgca gatccaccat atgtggcaga ttaatgggat gcaggcctct ctctgtctct
      541 ccctctctcc ctctctctcg agcacctgcc ttcacatttt ccacttctaa aattccacca
      601 gccgcttgga aaaagaaaaa aaagaaaaaa aaaaaaaaaa aaaaaa
//
LOCUS       KCHQ01000824             463 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 93163cha ultra-conserved
            element locus uce-609, sequence.
ACCESSION   KCHQ01000824
VERSION     KCHQ01000824.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 463)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93163cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>463
                     /note="ultra-conserved element locus uce-609"
BASE COUNT          149 a           84 c          127 g          103 t
ORIGIN      
        1 gtcagcgaca gagctgcgtg agcgagcaca agccacagac cctttatgtg atgcccagtt
       61 ggaccacagg gggcactgat gtgatatgtg agaaagaaac agatgagagt gaagagagag
      121 agaaagagag aaagagagtg gggaagacag gggaagggag agagacagag agggagggag
      181 aggaagagag atgcaatgag gcaaggctac agggatgaac gcaaagcgtc tctctctccc
      241 tccatttttt caatatcccc tcctcatgaa atttcatttg gattgtaaat gttcagtaat
      301 ttaccatcat aaatgtgtaa tgggcccctg aatccaatga cattgtgctg gctaatcaac
      361 tcatttgaaa atgaatatac atctattaaa gggaactcag catttcccct ttgttaagac
      421 tggcatgctg tcaaacatgg gaacacttcc tgaaaggggg ttt
//
LOCUS       KCHQ01000825             601 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 93256cha ultra-conserved
            element locus uce-608, sequence.
ACCESSION   KCHQ01000825
VERSION     KCHQ01000825.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 601)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93256cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>601
                     /note="ultra-conserved element locus uce-608"
BASE COUNT          161 a          138 c          126 g          176 t
ORIGIN      
        1 cctttagatg cgactgtcag tgaaattaaa tgtctcattt gatgatttaa agaaaaaact
       61 attttaatcc cggggggggg ggatactttt ccaacatgtg aaatgtgaaa acgtgttttt
      121 tttcaggaat gcaacccctt tgtgtggaaa cagcagacaa atatccacat cttcctcatg
      181 tcaaaatctg tcagagcatt tggagtcctt tgatattttt tttcccctct tgctcatatt
      241 gaggcggctt agaggagatc ctgaaaagac cttttgaaat ggaccagagc tggcagtctg
      301 gctatttggt aaccccctcc ttttcctcag cctgttttac agtctcatta aatcggccct
      361 ttgttttgcc actttccaag ctctgatctc tggcttagga cgagtcaaga ggccgagaca
      421 gtttgaaaaa ggctccctcc gccacaaaga ggccgcttgt tcgcaatcat tcccctcttc
      481 aacaccgccc agacaaaaaa gagagggaga gagcaacagg gtcattcact ggcgcgttat
      541 cgtgagaact taatgaaagt tttataactc ttgaaatgtt tatgaccttc ccactcagca
      601 g
//
LOCUS       KCHQ01000826             229 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 93349cha ultra-conserved
            element locus uce-760, sequence.
ACCESSION   KCHQ01000826
VERSION     KCHQ01000826.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 229)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 229)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93349cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>229
                     /note="ultra-conserved element locus uce-760"
BASE COUNT           67 a           84 c           27 g           51 t
ORIGIN      
        1 atataaaaac tcctccaccc cctgcaacac tccccctacc tccttttccc tccccaaacc
       61 cttgcagcac ttcacaatca tactcccttt tgaaagaact gaggaaaaaa tcctgccaga
      121 gcctcaatta cacaatggca gaaaaagctc cacacactga cccccagcca gctgcattca
      181 ctctctgcac atctctctcc acaggaattc taaaggcctt ttagtcagg
//
LOCUS       KCHQ01000827             273 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 93621cha ultra-conserved
            element locus uce-763, sequence.
ACCESSION   KCHQ01000827
VERSION     KCHQ01000827.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 273)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 273)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93621cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>273
                     /note="ultra-conserved element locus uce-763"
BASE COUNT           91 a           46 c           64 g           72 t
ORIGIN      
        1 gaacagcaaa ttaaagtggt aattactttt aagcccggaa aggtgaagga ttgtatggca
       61 gggagcaatg ggtcactatt gaatagagaa tagcggagca ggcagacagt gtgaaaggca
      121 gatatgcatc tcaatgaaat atggaggagc atactcaaca aaaggcgaaa tggctcctta
      181 atggccacat gccctcaaag acgtattgtc tgatagattt ggaatattat ctcctctact
      241 gcagttatct ttaaacagcc tttttatact tat
//
LOCUS       KCHQ01000828             451 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 93709cha ultra-conserved
            element locus uce-603, sequence.
ACCESSION   KCHQ01000828
VERSION     KCHQ01000828.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 451)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93709cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>451
                     /note="ultra-conserved element locus uce-603"
BASE COUNT          147 a           93 c          105 g          106 t
ORIGIN      
        1 atatatacag atttatttca cctcagtcca aagttagaaa aggcaaattc ctccccatca
       61 aatcaaaggg agacacaaca aagcaactgt gtacttcaag acttaaatct tacaagttct
      121 taatccttct gaagtccaca cgggaccttt ggtctccatg gcaacggcag ggcattcaac
      181 caagtgattg cctgcaatga atttcagata agacaaaatg gaagtgaatt gatgtgattt
      241 taatgcagaa gtgagcggtg gaggggaggt ccactcggtt catatttgaa taaagcaaac
      301 agagcagaca aaaggctgac agccgtaaat gacattgtca gtacaaaaat tatcagccag
      361 tttacaatct gtttgctcat gtagaacaaa cagaatgtgt gtggcatccc cgggctttgt
      421 gaacggcagg gccggcagcc ggcggcgaga g
//
LOCUS       KCHQ01000829             537 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 93798cha ultra-conserved
            element locus uce-602, sequence.
ACCESSION   KCHQ01000829
VERSION     KCHQ01000829.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 537)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 537)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93798cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>537
                     /note="ultra-conserved element locus uce-602"
BASE COUNT          162 a           94 c          144 g          137 t
ORIGIN      
        1 cctccttttt ttattttaag atggtaattt ctgtactagg ggtgagaacc agggagagag
       61 agagagaacg agatagacaa tacaagagtg agaggagagg gagagaggga gagcaagagg
      121 gtgagagtgt gggagaggga gaattcaagg agaatacaag ggaggaaagt aggttaattt
      181 atttcatttg caggaaggga aagaacttaa aaagaaaaaa ataaggttgg tgatagtgag
      241 aacgaaagtg taggatgctg ttttcatgaa caagcagctt aatgcacacg ggcagccaca
      301 gtaagcctgc cagaatctcc ctgtgcctga ggccatctgt gagcagaata gcaattttat
      361 tactttgtca ttaaaccaat ttcacagcag tattgtttgt taatgagcag cctcaaacga
      421 gcggaggtgt cacgtactgg aatagcagca agatttgtga ccccggctct cctctgtctc
      481 atcctggcaa cctgtacctc attcttattc ttctgctctt tctgccgtcg tcttcct
//
LOCUS       KCHQ01000830             297 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 93882cha ultra-conserved
            element locus uce-601, sequence.
ACCESSION   KCHQ01000830
VERSION     KCHQ01000830.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 297)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 297)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="93882cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>297
                     /note="ultra-conserved element locus uce-601"
BASE COUNT          106 a           49 c           37 g          105 t
ORIGIN      
        1 ctgtgaagta caggaaagta ctagttttta ttccttcata atcaaacttc acaaacagct
       61 tgaacttgta caatacctca gagagtgaaa attacaaaaa aagtgctggt aacatttaca
      121 aaaatcatcc ttacttagca acaatcagtt tattcttcca cacttttttt agtcttttgt
      181 attaaggctt aatacttctg tataaagtat atgcaagata agtcttcaca gtttttcgaa
      241 aaaagtcaca atattatgta acataatgaa gcttttacgg ctattttctt tataata
//
LOCUS       KCHQ01000831             782 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 94059cha ultra-conserved
            element locus uce-768, sequence.
ACCESSION   KCHQ01000831
VERSION     KCHQ01000831.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 782)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94059cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>782
                     /note="ultra-conserved element locus uce-768"
BASE COUNT          201 a          223 c          145 g          213 t
ORIGIN      
        1 ctccaaagtc atttagaaaa gcgctcatat tttcgacaca aaaaaggggg aacatttggt
       61 gagagagaat tcatcatcag gtgtctagag gttttcctta atagaaaagc tgagtcccac
      121 tgagtgcgct ccgtgtagcg gccagccacg catgctcagg accagcaagc cgccattcgc
      181 agcgggccat aagacattag cataatttta tataacacag gcacccgcgc tggaaattta
      241 atacatctca gcaaatacga gacaggcgtt ttgcataatt tttttctcat tctccaccta
      301 gcgtcctctc tcccttctat ctctctgtcc tcgctccatg tctctctcct gcctcgtctt
      361 cggctttcct ctctcccgct ctctctggct gccactctcc tttgccccag ccctcccccc
      421 aacacacaac cacccctctc tcctcgcccc atggtgctga tctcactagg agaggggaag
      481 ttcattacct cagctaaatc agaattagtc ccttcatttt gacggggcga acttcattag
      541 aaaggccctt ccttaatcca gcagggagaa ctgatgaatc tacatggggg caataatttg
      601 cttcacacag cacattcagc cacttcctca acactgtttc ccccttcctt ttctccgtct
      661 atctggcttt atgtacttat ggttacattt ttattagatc tgcggcaaaa aaaaacccga
      721 gaaaggaaaa cacctgcata taattaacta atggcagcag aaagggtgta aagaatgagt
      781 ta
//
LOCUS       KCHQ01000832             807 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 94150cha ultra-conserved
            element locus uce-769, sequence.
ACCESSION   KCHQ01000832
VERSION     KCHQ01000832.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 807)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 807)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94150cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>807
                     /note="ultra-conserved element locus uce-769"
BASE COUNT          229 a          181 c          181 g          216 t
ORIGIN      
        1 tttccctctc ctcaaagaga caaggtcaaa gagtcctgta caagtacttc aaactcaatt
       61 caagtatgtt gtctgagtgt ttcttttcaa cccctttgtc aaacattgcc tcattaatgc
      121 cgtttccttc ctccaagctt aaacatttgc agtcaaatgg acgattttta tggtattttt
      181 atctgtttca gcctatgtgt atgcacacag gacagggaac agcttatcag catgcatgta
      241 aactgctctt ttccccatat ctatttgcat aagatgagag agctacatgg ctgtaaccaa
      301 attattccta cactttatcc cccccttaca aaagaggagg agaatagggg aaattgttac
      361 tactctgtta gtggtgttaa cacccaacca agctcccccc tctgctccct ccatcctccc
      421 tctcctcccc tcccccctgt taccctggcc tatcagtgca gagcagtggt ctgtgaagaa
      481 attcccaata tctaaattta cacactgtat caatcttgtt taatagactg gaaagcttat
      541 agccgccgtg gcaagccggc agagagggca gcggtgataa attgtcggtg tgcaggcgac
      601 agccgcccgt gatgtataat gaaatattta tgatttatcc cagctaataa actgaaatga
      661 agtgcgtgat gtatgggaac agatgggccc tctattgatg ctgaagcgga gaggcaagag
      721 gggaagacga gacgggaaga taggtggaga gaaggaaaca ggagatgtga tgagagatgc
      781 tccagagata gtgagaaaaa atggagg
//
LOCUS       KCHQ01000833             577 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 94247cha ultra-conserved
            element locus uce-605, sequence.
ACCESSION   KCHQ01000833
VERSION     KCHQ01000833.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 577)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94247cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>577
                     /note="ultra-conserved element locus uce-605"
BASE COUNT          186 a          114 c          123 g          154 t
ORIGIN      
        1 agaccaaatg cctatgacaa taatatggat ggctgcttta aacttgaatg ttacttgcaa
       61 atgtagcttg aatgtgccga agactgggaa agaccatttc tgaagtatct gtctcattat
      121 ttaaggaaca caaaataaga aaaggtagta cttcaaatct tccacagcca ccacattatc
      181 aggaagaata aagagatgag acaaatagca gagtgatcta aaatattatc tcttcaatca
      241 tatccttttc cccagatatc ttcatttccc cctcccttct ctgtcagtta gtctggcaaa
      301 caatcccctt gttagcaaac tgttaagaca gccgcttggt acacaaattg cgctcgacca
      361 agcgaatttg ttttgcaagg gtgacctgtt taatcatctc attttctttg gcggacattt
      421 attcatctgg tttccacggt tacagagaac attaaggggc tacagtaata aggctggaga
      481 gtcaaacagg taataaaaaa attaacgcca ttttccagca gccgaggaca gtgggtgaaa
      541 tgaatcaagg gagaggggag agaagcagcg gggggag
//
LOCUS       KCHQ01000834             343 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 94340cha ultra-conserved
            element locus uce-604, sequence.
ACCESSION   KCHQ01000834
VERSION     KCHQ01000834.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 343)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94340cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>343
                     /note="ultra-conserved element locus uce-604"
BASE COUNT           72 a           92 c           79 g          100 t
ORIGIN      
        1 ctctgcgagc ctcccctgaa gttggagatg cacacatgag gtctctctgc ctgggtggtc
       61 tctctacttt agtgagctgt tgctaagcag ctaataatag tcgtgtttgc tgagtaattt
      121 ttgcccttct ggaaccaatc agatgcaaga aagtcctgca atctgacagc cccagaggcg
      181 ggatctcgag tctttttttt attttcaccc ctcctccttc tctgcctcca aatggagaga
      241 ggtctttttc tcctcttcta ttgaatctca gagttggccg tgacgcgcgg cccaggggaa
      301 gaccacatag atctcaccag aatgctacga ccatcgaggt ttc
//
LOCUS       KCHQ01000835             304 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 94434cha ultra-conserved
            element locus uce-805, sequence.
ACCESSION   KCHQ01000835
VERSION     KCHQ01000835.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 304)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 304)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94434cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>304
                     /note="ultra-conserved element locus uce-805"
BASE COUNT           87 a           52 c           62 g          103 t
ORIGIN      
        1 tttctctgac acaaagcctt ataaatctgt gtctgatttt tcacattgca cattgttttt
       61 agttaatgat tttcatctgt ttgttgttgc tgtgatagtg gggaaatgta ccatatgctc
      121 cggcaaaaga caaatgatta gcaaatgaaa ttctggacag ctgtctgact gaaagcgttt
      181 ggttgatagc attctgctac cataattagc ttaagctttg ggttaattaa ctttctacct
      241 ggatatgcat aataatagca ttctgcagaa agccaaggag cttccagtct atcagcagga
      301 aagg
//
LOCUS       KCHQ01000836             781 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 94532cha ultra-conserved
            element locus uce-804, sequence.
ACCESSION   KCHQ01000836
VERSION     KCHQ01000836.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 781)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 781)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94532cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>781
                     /note="ultra-conserved element locus uce-804"
BASE COUNT          220 a          150 c          192 g          219 t
ORIGIN      
        1 gttatagcct atagacaacc cgttctttta taaggtgctc gtggtgggaa cggttgatga
       61 gcagttgaca tttctcagta ggccgccgtg gcattagttc cttaagtgca ttctgctttt
      121 gaaagaattt taggcagtta acccacattg tataaggctg cataagatgc tggtcaattg
      181 cctcaacgtc atttgtgaca aactaatggt ttaaaatctt gatttgaaat gctgttgatg
      241 gacaccacaa aggagggagc acactgagcc tagcagcctc tgtgcttgct ggcccacagc
      301 actaaagaac agcaatggtt ctaattccaa taaagagaaa atccaaggtc acactgtgaa
      361 cttcctcccc atcagaagac cacagagact ggctgggaga gtgcataata tcctcacagc
      421 tatttttacc ctcaaattaa aatctatgac atgttgaaat gactgcagtg tgcaagaggg
      481 gtattcaaag cagacactaa tgacgcttat taatggcgtg aatgaagtct tgacaggtcg
      541 tgtgtcattc tgcaggcaat gctccactgg cataatggct aatgtaagtg gggataatta
      601 tatatattat accctgtctt atggtatttt ggcaggagta tgaggagcca ggcagttaga
      661 gaggagagtg aaagcacttg ctctttttga gacagagatg tgcacgcgtg tgtttgtgtg
      721 tgcgtgtgtg cattcacccc tttcttcagt agtggtcccg aggaggaata atagtaagac
      781 a
//
LOCUS       KCHQ01000837             401 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 94620cha ultra-conserved
            element locus uce-807, sequence.
ACCESSION   KCHQ01000837
VERSION     KCHQ01000837.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 401)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94620cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>401
                     /note="ultra-conserved element locus uce-807"
BASE COUNT          158 a           66 c           46 g          131 t
ORIGIN      
        1 acttttactt ttaaaattac atttctattt tctaggactt cagttgcact ttccttccga
       61 cttaaaaact gagtacaagc aaatggtatt tatacagtag tctacgtgat attgtacaaa
      121 aataacattt tgatttctgt gaaaacattt cattcccaaa taactcctga ttctgctgtc
      181 ctgatgactg ttcttgatgc taaattttgc caaggtataa aacaaataaa gaaaagaaaa
      241 aaacaaacaa aacaaaacaa aaaaaaatcc aaagccattt taaaagtaaa agtatacctt
      301 ggactaccaa gtgatattta aattgtaaac agatttctat aaaagaacgt gtttctttca
      361 atacctccaa aatttttata tcttagcaat ataacatgta g
//
LOCUS       KCHQ01000838             456 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 94804cha ultra-conserved
            element locus uce-801, sequence.
ACCESSION   KCHQ01000838
VERSION     KCHQ01000838.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 456)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 456)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94804cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>456
                     /note="ultra-conserved element locus uce-801"
BASE COUNT          144 a           92 c           97 g          123 t
ORIGIN      
        1 atttctgttc agtgcaatat actgtgtgaa gacttgctca gtgagtgcta taaacaagaa
       61 atattgtgcc atgaaagtag aaaaacgcac cacttttgca aaaaagatta acattccact
      121 ctatccaaat tatttaagat cttaggcttt gagaaagcag aatatgagaa cctcaaaggc
      181 tatgatgcac aacaggaaaa aagcagttga ctatatcatc ataacccttt ggcaacaaca
      241 ctgtggtggg tgattcagaa acatgtgctg ccattttatc atgccgaggg ccaagttttg
      301 gagccttaaa caccccgcca aggcttgata aatctggcct gaaaaatctc atttgcagag
      361 agttaggcat ctgcaacaat atttatcttc ttccctgtcc aagggtaatg ggttaggcag
      421 gatggatgag ggcacagtcc tcttgccttc aggtgc
//
LOCUS       KCHQ01000839             257 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 94966cha ultra-conserved
            element locus uce-802, sequence.
ACCESSION   KCHQ01000839
VERSION     KCHQ01000839.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 257)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 257)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="94966cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>257
                     /note="ultra-conserved element locus uce-802"
BASE COUNT           74 a           62 c           42 g           79 t
ORIGIN      
        1 tgaaaaatta cagtcctctt cattaactcc acatcgcagc acaacgtctt ccccctcact
       61 tcataaatgg gctttaattg agggagctgg ctccttagca gggaacctct ttcactctgt
      121 gtcgattaaa acgtcatttt acagccaaaa aagaaacacg ttcccaatca ctgcccttga
      181 attattgttc tgtagctcga ggcttgtatt ttaaagtcac tgaataattg caatcagatt
      241 attctaatca agtgctg
//
LOCUS       KCHQ01000840             249 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 95061cha ultra-conserved
            element locus uce-809, sequence.
ACCESSION   KCHQ01000840
VERSION     KCHQ01000840.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 249)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 249)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95061cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>249
                     /note="ultra-conserved element locus uce-809"
BASE COUNT           75 a           61 c           51 g           62 t
ORIGIN      
        1 agcaggtagt cctgtggtca cacactcact cacacacata cgacagacaa acattcctcc
       61 aaacggttgt tacatgccag agtcaaatta gtccatgggc tttttaagtg gcacaaaagg
      121 ttcaaattag agacaggact ttgaagccat acagtttgca ggatagtctg tagcccctca
      181 tggttttggc ctccatatca ttccctcaga aaagaacatg ttcacatcaa aggttaaccg
      241 ggccatgtg
//
LOCUS       KCHQ01000841             707 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 95151cha ultra-conserved
            element locus uce-808, sequence.
ACCESSION   KCHQ01000841
VERSION     KCHQ01000841.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 707)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95151cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>707
                     /note="ultra-conserved element locus uce-808"
BASE COUNT          211 a          156 c          121 g          219 t
ORIGIN      
        1 caacatccca tacccaccta tttttcccat tttccttcca gtcttctccc actgagcttt
       61 tgctgttgca tccatgtctt ttatcacaat tttgacccac agaaaggaat tctcacaaga
      121 tatcaaaaca aaaatctata tttaatatgg gagcaattac aaagcgaagt tggctgcaca
      181 gggccgttgt caccagagcg cgtgtttttc atcaaatagg tcattagacg atgatggatg
      241 taaacctata aagtatctaa actggacctt ttaacaaacc acgagcaaca ctatcatttc
      301 tctaatagaa cctgctgacc gtgtcattcc ctcctgccat ttgtcatttt tccttgtgaa
      361 ataatcaata tttgggcgct ttgaaataaa taatatgaaa gtcatagtaa cctacccgag
      421 gagcaacaaa aatagactta tggaacgttc agaaggcctt tatggcctca gggcagtgtc
      481 tactgcatgt ttggaatcaa tgcataacat gaactgcatt ttttacacta cagactgcag
      541 gattttaggt tgtacacttc attttcgggg tttgcatctg ctgtgttctt tttatcctca
      601 agtacagtaa gcacgttgga ttgccatagt agcaatgctt tgtagtaaag tgccataaac
      661 gttactgggc tcttaaacag tccctattca actattacaa aaacaca
//
LOCUS       KCHQ01000842             386 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 95244cha ultra-conserved
            element locus uce-388, sequence.
ACCESSION   KCHQ01000842
VERSION     KCHQ01000842.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95244cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>386
                     /note="ultra-conserved element locus uce-388"
BASE COUNT          113 a           84 c           58 g          131 t
ORIGIN      
        1 gtaacaaatg gaattcaatc agtgtccgtg cataatgatg gtcattagga gaaagaaaat
       61 aataatgaca tcctatctgc attaaacctg cagacacttt acacaatgat cctgcagcca
      121 ttattgatct ccatggagat aagcaattgt cacttttcag cattgtgcct gaatgttaaa
      181 tacagctcat tttgtttttc tacaaactat ttcagccgac actaaatttt catttaattc
      241 acttcactac ttgaaatcct tggtctcatt ccacatgatt gtaattttgg ttcattgtca
      301 cagctgcctc tcctgttccc agtatttttt cctccatttc acggtttcac agggctcata
      361 tgaaatgaac atcaaacctg aatgtg
//
LOCUS       KCHQ01000843             624 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 95340cha ultra-conserved
            element locus uce-1125, sequence.
ACCESSION   KCHQ01000843
VERSION     KCHQ01000843.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 624)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95340cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>624
                     /note="ultra-conserved element locus uce-1125"
BASE COUNT          159 a          153 c          172 g          140 t
ORIGIN      
        1 ccccaatcca gccttaataa ctctataact cacctcagcc tcagatttaa ttgcttatct
       61 gtgtgtaaac gtattaaccc tctgctgtat ctgttctgcc gccgtcccgg gggcccgaca
      121 agcctctctg actgccgtgc cttacatcca atgaatagtc cttctctgag tggtaatagg
      181 gaatcagcat cgtagcagca agcattggcg gcgtgtaaga gataaatcag attgggggtc
      241 ttgctttgcc agtttattga atctaaattg cgtgcgcgcg tggcccccgc cggccctaca
      301 cggcccatcc atctcccggc tgataatgga gcgggcccga ttccacctgg tgggagcatt
      361 attacatttc ccctctaacg agacccagct aatcctgcca agggaggagg acaggagaga
      421 cgagagagga ggagagaaga gaattggaga gggggaagag aggagtgaag gagggtgctg
      481 ggggaggagg aggagaagag aggagaaaaa gaagggagga gaaaagagat agaagaagag
      541 attgtgttcg ggaaaaaaca acatcctggc agcctgcctc ttcctcccac tctcctcgtt
      601 ctctctttct cactttcttc ctct
//
LOCUS       KCHQ01000844             643 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 95529cha ultra-conserved
            element locus uce-219, sequence.
ACCESSION   KCHQ01000844
VERSION     KCHQ01000844.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95529cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>643
                     /note="ultra-conserved element locus uce-219"
BASE COUNT          162 a          159 c          116 g          206 t
ORIGIN      
        1 cttctacaat gtgcatggaa gactgtagca tcatatacat tttgattgaa catttttgcc
       61 atctccagct atttagaatg aagataatgt tttgtttctg agttgtttca ttcagttgat
      121 ggcaaacctt tgttctgagt ctccttatta tgatcacaac tttatttgtc aagaaaatac
      181 tcctctcaga ggtgagaccg ctgtaagagg ctcttctctt gcagatattc ccctcacttg
      241 gtgagcagtg aatttggttt gtgttcatat tatttattct gctaatttgc tcgatgcaga
      301 cacaacattg acttactcca tcttatgact gaagctgctg aaagggatga gtgtgtcagt
      361 ctccattcat caagcagcca acagttcaac aatatacatt ctctgggccc ttttatcact
      421 cccaacacaa tgttttgcag ctgcacgtca gggttcaaga accaacgttg tgatgagctg
      481 gccaacccct gcgattactt ctgtcagaat gaggggatgt gcacattaac agctcttaac
      541 aaaccacgct gcaagtaggt ccttctcacc tctccagctg tattcagagc ccactcaccc
      601 ccttttgtct acaccctcac ccaaactcca tctggctcca ttt
//
LOCUS       KCHQ01000845             332 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 95705cha ultra-conserved
            element locus uce-116, sequence.
ACCESSION   KCHQ01000845
VERSION     KCHQ01000845.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 332)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 332)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95705cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>332
                     /note="ultra-conserved element locus uce-116"
BASE COUNT          107 a           73 c           63 g           89 t
ORIGIN      
        1 ctaaatccta ctcttcctct atttcaataa agaggaaggt catttgctca gcagcgagca
       61 gcaggatttt cctcaacctt gtatgttgtg tccaggtgtg ggtgactgat gcagctctgt
      121 gagacgccac tgcgggacag atctcctcct gagccaactt aacttatcag gaacatggac
      181 caaaaaaatc aggctaatta attaagaaca gtattagaag taatgggata ttataatata
      241 aattgctaca ttctggaacc aatttaatcc aattactgga acccctcatg aatataatac
      301 ctccaaaatc actccgtcag agtccaaagg ga
//
LOCUS       KCHQ01000846             272 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 95803cha ultra-conserved
            element locus uce-115, sequence.
ACCESSION   KCHQ01000846
VERSION     KCHQ01000846.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 272)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 272)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95803cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>272
                     /note="ultra-conserved element locus uce-115"
BASE COUNT           85 a           72 c           72 g           43 t
ORIGIN      
        1 ggagagtcaa tggggcccgc gagagcgtac cttctcccga tgatgaagcc gaacaccatg
       61 aacaccagga tgatggtccc cgccacggcc accaccgcga tgatgatgac ggggttctgc
      121 tcgctggaga caatcgcagc tgatgagaca gacacacaca taaacacacg gacagacatt
      181 cagaaacaca gaaatgctca gtgtgaactt cagcacatca aagactacaa tctgcaggac
      241 ataattgagc ccaatgagag gcgtggagat tg
//
LOCUS       KCHQ01000847             279 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 95897cha ultra-conserved
            element locus uce-113, sequence.
ACCESSION   KCHQ01000847
VERSION     KCHQ01000847.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 279)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 279)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95897cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>279
                     /note="ultra-conserved element locus uce-113"
BASE COUNT           51 a           91 c           69 g           68 t
ORIGIN      
        1 ctcgactcgg ggatttttca tcattagccc gcgctgcatg gcaaacgggt ggtgtggccc
       61 ctttttttcc ttacaggcgg cagtatcaca gctctgatct gtcacccttc gcttgcctta
      121 atgtgtgaaa gcaagacgtg ttgcgcctat tagcacttct tggcaaggct ggcatgctga
      181 tctctcatcc ccggggagcc cggcaatatg gtgccgcatg gtgaccgccc gccagccctg
      241 gctcccgctg tcacaacaca tcacgcatcc ccaacaacc
//
LOCUS       KCHQ01000848             826 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 95993cha ultra-conserved
            element locus uce-112, sequence.
ACCESSION   KCHQ01000848
VERSION     KCHQ01000848.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 826)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 826)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="95993cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>826
                     /note="ultra-conserved element locus uce-112"
BASE COUNT          237 a          193 c          183 g          213 t
ORIGIN      
        1 cttcctgcat gatcaatacc aaagcatttc tcaccattga ttatacaatt acagagaagt
       61 taaatctgtg acacactctc atgtcgaagc attacccaat gcagccagaa gtggaggcta
      121 agaggaggaa agaagcttcc tcttcactca ctgttttttc tttttttgaa aaacgtggtg
      181 cttaaagcga gctcagtgta gtccaggtac ttcactcaga tgattataat gccacgaggg
      241 tgcaatacat cactcttatt agccacactg gagcacaatg gtatcataat taatggtcgc
      301 agcaggattg aacgctgccc tgacatggaa aagtgggcct gcttaagctc tacaaggcat
      361 ttaaatatgc agagtgaatg gcacaaccca aaccctcctg ctctaaggac agcccacgct
      421 cattagcctg acaccttccg tggcattgat acaaggacga ccggctatac tcacacacac
      481 aacacaacac aacacacaag cacagactcc aaaaatgtgc atgcagacca cagctacaaa
      541 atttaaagtt gcatggtgct acatgaaaag aacaatcttg tccctcatca gtgcccatca
      601 cttcttttac acgtcccccc tgcattgttg tttttgtcta aaggcttagt ctaagctgaa
      661 tgcagatgga catatatgtg tcagcagcca ttatgcaaat gttcagtaat ggcgtttggt
      721 ctgtgtgtga gagtgtttgc agcgaatgtg ggtgctgtgg cagaatgtgg tgtctggtgg
      781 ctgtggtata gtgtctagca cagggaaact gcctgcgcgg cacgag
//
LOCUS       KCHQ01000849             236 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 96088cha ultra-conserved
            element locus uce-111, sequence.
ACCESSION   KCHQ01000849
VERSION     KCHQ01000849.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 236)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 236)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96088cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>236
                     /note="ultra-conserved element locus uce-111"
BASE COUNT           71 a           63 c           42 g           60 t
ORIGIN      
        1 cacacacaca gcaggagaga aggacacgga ctgctcagta tgcagccctg acattgtcca
       61 catctgatac gggacattag cccctaactc catccataca ccgctgccct tcactttata
      121 ttactttatg ttaatagaaa aatattacat acaacatcat ttgtctttgt taccacggca
      181 ccccacaact gatttaaatg catgtgttta cctctgcaga caggtgaaga cagggg
//
LOCUS       KCHQ01000850             404 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 96180cha ultra-conserved
            element locus uce-242, sequence.
ACCESSION   KCHQ01000850
VERSION     KCHQ01000850.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 404)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96180cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>404
                     /note="ultra-conserved element locus uce-242"
BASE COUNT          136 a          133 c           67 g           68 t
ORIGIN      
        1 cctctctgct ccatcttctt tttaaaaccg cccagctgat tttgtctcct ctctaccccc
       61 tttgtagata attggaacaa tcccactgat gcccaactct gcagggccct ccagccaatc
      121 agggggtggc aacccagcac tgcaggtaca gccaattaca cctcagcttc tgaccaacgc
      181 tcaaggccag atcatcgcca cagtgatcgg caatcagatc ctgcctgtca tcaacaccca
      241 gggaatcacg ctgtcaccaa tcaagcctgg acagcaggta acatacacac cgatgcacaa
      301 acacacaaac acacacacac acacgcaaca aaacacacac acagaaatac acgagacaaa
      361 atagatgaca aagacagaaa tacacacagg gacagaaaca caca
//
LOCUS       KCHQ01000851             477 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 96269cha ultra-conserved
            element locus uce-640, sequence.
ACCESSION   KCHQ01000851
VERSION     KCHQ01000851.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 477)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96269cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>477
                     /note="ultra-conserved element locus uce-640"
BASE COUNT          117 a          140 c           98 g          122 t
ORIGIN      
        1 ctctccccct ctccctctgc ctcctctgtc tgctcctcac ggctgggcac agttggggag
       61 cagctcctta ttcattcatg agagaagcac cggataaata aaaaggttca ttactgtgct
      121 aaagtgttac taatgacatg tacctgccac tgagcacctc cgaaaatcta atgtgacaca
      181 ctagaatgga aaatctattc tgccgcacca aggcctccaa tggtgctagc acatactcta
      241 tggaaatttc tctccgcttg ccctccaatt gtgtctctct aaaaccaata tttacaatcc
      301 catagccatt atgtcctact acgccctctg cgcctgctgt tgcgacctcc atattagctg
      361 aaaattggac tttgcaaact tagcagggga gaagagactc ttctcataga tgagaggggg
      421 cagcaccagg ggactcagcg tgaggctcgc ggtgcctctc aactccctgc tgcccca
//
LOCUS       KCHQ01000852             746 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 96368cha ultra-conserved
            element locus uce-119, sequence.
ACCESSION   KCHQ01000852
VERSION     KCHQ01000852.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 746)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 746)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96368cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>746
                     /note="ultra-conserved element locus uce-119"
BASE COUNT          200 a          151 c          154 g          241 t
ORIGIN      
        1 tgacacggca gacatcagag agatttttca ggaggctctc ccggcgcccc aacagctctt
       61 aattaaccac ttaggtatcc ccactcgttc ccccggccgg cactttccaa atggtaagga
      121 ggttctgtgc cacggatcta aacaccgggg gaagcgtgct atcaaaagat ctgggtaaat
      181 gaaggcttgt gtaaattatt tttaatgatt ccctcctggc acatcattat gtttgtagtt
      241 acacacaggc acttctgaga cggctcatct tcgctaaggt catcagcagg accaactgta
      301 actagctgct agtctgtaaa tggcttatta attagtgctg tggttttaca tagctgtgag
      361 ctctgatata tagtgcaggg atcgtaattg tgcggaatcg aaaatgatga tgatgatgat
      421 gacgataacc catctccagg ctatttatgc aaattgccgt ctcatattag aaaatcatta
      481 cctatccaaa cactgcaaca ctcagcctgt gtgaattaca atgatggatt ttatgataat
      541 tgcgatttaa ttttctccct ctccctctct ctcttttgtc tgtctggagt ttgaaaataa
      601 tttggtcatt gtgagtgcta ttaattctgt attagttaaa gctgaatgga tgggtttatt
      661 caatttcctc tgaattgaga tttgtaaatc atcattttgt gaaacagaag atcacttgct
      721 tttttctgac tggatataat tcagga
//
LOCUS       KCHQ01000853             761 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 96418cha ultra-conserved
            element locus uce-118, sequence.
ACCESSION   KCHQ01000853
VERSION     KCHQ01000853.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96418cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>761
                     /note="ultra-conserved element locus uce-118"
BASE COUNT          204 a          182 c          152 g          223 t
ORIGIN      
        1 ttcatatttc tgctttttct gcggcgagcc cacgtgtgaa gctttcactc aaactctatt
       61 tacattgggc tgagagggag cctcggcgga gtttagccgg cgcagttaat ctgcactgat
      121 ggtctaacag ggactgtctg cgccgtatct ccacagccga atcatacact atgaaactgt
      181 atcaaatgaa cagatggcag tgacacgaat taaaagcaca gaacaatagt ggaatataaa
      241 ccagaaatga cacccaaagt ggctgttgat ttatagccgc gccgagtttg gtactgggct
      301 tccatgtata ttagtgctac aaatctgggt ccatttagca gggagatgct catacataca
      361 tcaccgactc ctgctccaag ccaaggtcag tccttattgc atcaatcttt ccagcagagg
      421 ctactccaca cagcagcagt tttgtaactg tcgcagctgt aatggaatct tttttctcgc
      481 gcttcatctt tctcttatca catgaaatat atattcaact tctcttcttt ccctcattct
      541 ccagattctt tttattttat ctgtaaaaca ctccccggga cctcatccct tttctggggg
      601 acacactcgg aggagcacag attttaaccc cttcaggtct ccgtcgcagc gggtcacttg
      661 tgaatgtata acaatatgaa aatttaaaaa tgcattacgt aaagacagat ttgtctcatt
      721 tacaggacgc tttcagtcag gcggaggaca tttattaaaa t
//
LOCUS       KCHQ01000854             620 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 96582cha ultra-conserved
            element locus uce-19, sequence.
ACCESSION   KCHQ01000854
VERSION     KCHQ01000854.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96582cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>620
                     /note="ultra-conserved element locus uce-19"
BASE COUNT          191 a          115 c          149 g          165 t
ORIGIN      
        1 gcgcagagac agatgcatgt cagagatagc agatcccatc tcaggcagat gcctcttatc
       61 ataggcctgt ttgcataatt aggccttttg atattcaccc cctctgactg acaaaaagta
      121 taattgcagc atcaactacg acaaaaggta ggcacaaaat aaacaagtca acataaatag
      181 ggagaaaaga tgcggtgtta tttttgtcct gtgggaaaaa aagagggagg aaaaaacacc
      241 attttaaact aaatctgctg tcagtcacag tcaactggtg tgactcggtg ctcagaggct
      301 ggtcctgtga atgcctgcaa aacacagagc gtgaggcctg attgtaatta tgctggaact
      361 aatatgcttt tcaaaatgag ccattatgag ctaatgctgc actgccaaag ccctgtctgt
      421 ttttgtccct ctgtcttgga tagtttgcaa aggtatggct gatattgagg ccatgggtta
      481 tgatttcaga ggcagtctga ctaggatgag ccctacttaa ctttaggcta atgctgctta
      541 caggtgagat gagggataaa aacacctgac acctgaaaag gggaggattt ttagaaatgt
      601 ttctgataga gaaatagttg
//
LOCUS       KCHQ01000855             390 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 96674cha ultra-conserved
            element locus uce-215, sequence.
ACCESSION   KCHQ01000855
VERSION     KCHQ01000855.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 390)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96674cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>390
                     /note="ultra-conserved element locus uce-215"
BASE COUNT           93 a           65 c           67 g          165 t
ORIGIN      
        1 gagagacggt gttggagtcc agtgctgaca gtcattgatc acaaatgcag gccccccccc
       61 cattcttaca tcttaataaa tgtgcctttt gatttgagta atcaataact tatgatttct
      121 aagtaactct gtgttcggta ctatttactt tttgggttat tgatttctgc caatgtgcat
      181 attttcaaat gtacgtattt attagtttca aagtaattaa tgagatatta cctgtttatt
      241 tatttattga gatatttatt ctgattcttt atttttttga gacaggtttt tatcttccgt
      301 gctgtcttac ttctgacttt gtgccaatgt gctgctttga ggtgttacat atcgtgggtt
      361 tgtatcatta ttaaaccctc actctatatt
//
LOCUS       KCHQ01000856             703 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 96770cha ultra-conserved
            element locus uce-18, sequence.
ACCESSION   KCHQ01000856
VERSION     KCHQ01000856.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 703)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 703)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96770cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>703
                     /note="ultra-conserved element locus uce-18"
BASE COUNT          172 a          175 c          157 g          199 t
ORIGIN      
        1 ggctttgtta gcacgcctcg ccctgcactc ccgtccagtg tccactctgc accttgaacc
       61 atcgtcttga ggggctgaac tcgggagtcc gctccctccg accataatgt cccattttct
      121 gctcgtcttc accgaaggtt tttcctgcgc cgctccacga gaattctcca cgccgtcatg
      181 cagttcctcc cacctcattg cttgatcgta gtgtatatgt atggctattt ccagcaggta
      241 agggtgtggg atatagctct atgtggactt tgtcaattca tgaccaatgg cgaggtcctg
      301 cattatacac taagctgagc gggagagcag gtttgtttta ttcacaacct tgtggattca
      361 aacagattgc tcaggctggg gaattgacgc agatactatc atacaggtcc aagacatgga
      421 gagagaacag gtaggaataa actatgtata aaagcactgg taagcttcag cctcaggcaa
      481 agctacatgg gctagaatgt taccctcccc aaagccacaa tcaattcttg gcttcaccgt
      541 atccaaatgt ttatttttgc tcggctgaaa tataatgaca cgtcgttctc agatacaatt
      601 gtacccttgg ctcacattgg tattacagcg cgccttggtt agactcacct tggtttggga
      661 tgagttcatg ctgatcaaat ttaaacaagt tctaaatact gag
//
LOCUS       KCHQ01000857             370 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 96866cha ultra-conserved
            element locus uce-216, sequence.
ACCESSION   KCHQ01000857
VERSION     KCHQ01000857.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 370)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96866cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>370
                     /note="ultra-conserved element locus uce-216"
BASE COUNT           87 a          104 c           81 g           98 t
ORIGIN      
        1 gtcactgtgt ccaaccctat ttcacatcct agttaagtac acttacaaat ctgctgtgcc
       61 atggtttcta acctctcata cacaccagcg cgctcgcacg tgcacgtgta gcgtccccgc
      121 acacacacgc agcggcatca ccaggcctgt cactgccttt tatccgtcgt caaccttcag
      181 ctgtgcggtt tatccgtagt gacactatag caaagtgctt gactgctttt tgccaacaga
      241 ctgcaacact ttaactgtac ttagtcatgc atcattatgg cagactcaaa gcggtgtgtc
      301 tgggaacgcc tgcagatggc ggaggctgaa ccatttggaa aggaagcctc tgtgacaatg
      361 atgcttattg
//
LOCUS       KCHQ01000858             391 bp    DNA     linear   VRT 25-NOV-2019
DEFINITION  TLS: Chaetodon trifascialis isolate RS7173 96909cha ultra-conserved
            element locus uce-170, sequence.
ACCESSION   KCHQ01000858
VERSION     KCHQ01000858.1
DBLINK      BioProject: PRJNA484421
            BioSample: SAMN09765351
KEYWORDS    TLS; Targeted Locus Study.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
REFERENCE   1  (bases 1 to 391)
  AUTHORS   DiBattista,J.D., Alfaro,M.E., Sorenson,L., Choat,J.H., Hobbs,J.A.,
            Sinclair-Taylor,T.H., Rocha,L.A., Chang,J., Luiz,O.J., Cowman,P.F.,
            Friedman,M. and Berumen,M.L.
  TITLE     Ice ages and butterflyfishes: Phylogenomics elucidates the
            ecological and evolutionary history of reef fishes in an endemism
            hotspot
  JOURNAL   Ecol Evol 8 (22), 10989-11008 (2018)
   PUBMED   30519422
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 391)
  AUTHORS   Chang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2018) Ecology and Evolutionary Biology, UCLA, 610
            Charles E Young Dr S, Terasaki 2154, Los Angeles, CA 90095, USA
COMMENT     We identified thousands of ultra-conserved elements (UCEs) to
            examine butterflyfish diversification.  All of the UCEs from one
            fish are included in a single TLS project.
            
            ##Assembly-Data-START##
            Assembly Method       :: Trinity 2015-08-25
            Sequencing Technology :: Illumina HiSeq
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Chaetodon trifascialis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="96909cha"
                     /isolate="RS7173"
                     /specimen_voucher="CAS:237272"
                     /db_xref="taxon:109706"
                     /tissue_type="muscle or fin clip"
                     /country="Maldives: Faafu Atoll"
                     /lat_lon="3.075361 N 72.965231 E"
                     /collection_date="2014-05-12"
     misc_feature    <1..>391
                     /note="ultra-conserved element locus uce-170"
BASE COUNT           91 a           96 c           82 g          122 t
ORIGIN      
        1 atacagcgtt accactttgc tccttccaac catgcagagc agtgaataat gttccctatc
       61 ttaattaaac tggcatagtc ctttaaaaac aacacctcac ccctgattct gggcttcacg
      121 tttgctctgg agttcagcgc tgagtcccct ctcttcagaa caataaagtg aattagctct
      181 gggttaatct agttctgttg taatgacatt aaggaatttt tcaattaacc tctttgactg
      241 gctgttgcaa aggacttcac aaatgacttc ccatccagca agagctgggt gcttgtgcct
      301 tggggacacg gatgctcagg atgtggtctt atccatgtct gcatgcttgc ccccgcttga
      361 caatgcggat tagctgtgtt gctttggctc t
//
