LOCUS       DABS01000001            4359 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_18696, whole genome shotgun sequence.
ACCESSION   DABS01000001 DABS01000000
VERSION     DABS01000001.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4359)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4359)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4359
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..380)
                     /locus_tag="CPT85_00005"
     CDS             complement(<1..380)
                     /locus_tag="CPT85_00005"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27245.1"
                     /translation="MEIERSYMTEKFNIGSVQNSLIKQLENKVNNNSNQINTKTPDMP
                     NDKVELSTKKDEKKSLYKKIAIAGAAAAAIVGTAIYLKMHPDKADDVIKQGKQKIEEA
                     EKEVKKAAEEKTEKTKEEAQKAAE"
     gene            complement(448..627)
                     /locus_tag="CPT85_00010"
     CDS             complement(448..627)
                     /locus_tag="CPT85_00010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016777184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27250.1"
                     /translation="MNSHLKDGAKLSYDATKQQIKKVYKQLAVKFHPDKCKPADKEKV
                     ENIFKDIVGAYTQLK"
     assembly_gap    870..883
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1010..1840)
                     /locus_tag="CPT85_00015"
     CDS             complement(1010..1840)
                     /locus_tag="CPT85_00015"
                     /inference="COORDINATES: protein motif:HMM:PF01261.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27246.1"
                     /translation="MDTLKFVTAGQPICNGTAGYKRAFEILEELGLDGMELEFVHGVR
                     MTEANQNLVRDIVKEKNMVITAHGPYYINLNSKEDEKIEASVKRILDTARMGQSLGAF
                     SVTYHAAFYMGKSSKEVSERVHKSMEEICTVLDEEKLDIWVRPETTGKPTQWGNLEEI
                     VELSKNFKQVLPCVDFSHLHARTNGLYNTYDEFCAIFDTIGTELGDYALNNFHAHIAG
                     IEYGEKGEKKHLLLEESDMNYKDLLKAFKKFDVKGVVVCESPIMEKDAVILKEFYNSL
                     "
     gene            complement(1840..2781)
                     /locus_tag="CPT85_00020"
     CDS             complement(1840..2781)
                     /locus_tag="CPT85_00020"
                     /inference="COORDINATES: protein motif:HMM:PF02911.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27247.1"
                     /translation="MENKYKKRILFLGMPDMAIICLSKLVAEGFNIVGVVPPHFTEAT
                     YGLMCNFTKSLRLPLITYERTMDELDFIHKVRQLDADIAVVCSYNKKFPPELLKTVKG
                     GFVNCHPXXLPDYRGANPYSNVIINNEKETGITLHFMDENFDTGNIIAQKKVNIENKE
                     TMGTLFNRMNYLCAEFLSEFLQNFEQNTDVVSMPQPQGEFKKAPAIDSRNMRNFIDWD
                     KDAAYIDRFVRALNPFISAMTNFRGVFLKVYSSEISDKKVKEEPGTICHVKDTLGVAT
                     GSGVLYIKSLQFGSYMISDAKSFIEKFKPQIGEKLGK"
     assembly_gap    2451..2452
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2853..3596
                     /locus_tag="CPT85_00025"
     CDS             2853..3596
                     /locus_tag="CPT85_00025"
                     /inference="COORDINATES: protein motif:HMM:PF04536.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methanol dehydrogenase"
                     /protein_id="DAB27248.1"
                     /translation="MEYNFFMIKRILISIIFIMFLSLQCAFADSSYNFDGFISDNANV
                     LDTGAKNSINAFLWDLQKKTGADIAVVTVKSLDGKSIEQTALDVGREFKIGKKGENTG
                     AVVLVAPNERKLRIEIGYGLEGIIPDGKAGRIRDEQMLPYFRQGDYQSGIWRGTYQLA
                     DYIARAYGVTLSVNGPVPQQPSSGDDFGFLLLIIIIFFCIRFGIFPIFIPFGGGYGGG
                     FTGRGFGSGGFGGFGGGGGFGGGGASGGW"
     gene            3616..4338
                     /locus_tag="CPT85_00030"
     CDS             3616..4338
                     /locus_tag="CPT85_00030"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27249.1"
                     /translation="MTKLDKFIEQLKNIFGSRLKSVFVYGAKAGEKADNLLQDVDLMV
                     LVTDLRGEDIKKCSKPAREWMGKSCIFCSKRNALPVFMGEKEWYNSSDVYAMEYSDIK
                     ENHKILYGEDLICNINVNRDDLRLQCEAETKNLLMQFRAHYLMNAHSHIMLQKSLVPL
                     TKTLNAIFKAILRIKNIEVSKSPYENLNKIHSLFAINKSFYEKLLCHKEKHCTLNKKE
                     AIDTADTAVAELQKLLDYVNNL"
BASE COUNT         1252 a          767 c          822 g         1502 t
ORIGIN      
        1 tcttctgcag ctttttgcgc ttcttctttt gttttttctg ttttttcttc tgccgctttt
       61 tttacttctt tttcggcttc ttctattttt tgtttgccct gttttattac atcgtctgct
      121 ttatcaggat gcatttttag ataaattgca gtgcccacaa tagcagcagc tgctgctcca
      181 gctattgcaa tttttttgta taaagatttt ttctcgtctt ttttagtcga caattcaacc
      241 ttatcattag gcatatcagg tgttttggta tttatttggt tggaattgtt atttacttta
      301 ttttctaatt gttttattaa actattttga acactaccta tgttgaactt ttctgtcata
      361 taagaccttt caatttccat tgcacattat atatataaag ttaaaaagta ataaaatatt
      421 gctataagca aaaattttta tacaggctta tttaagttga gtatatgctc ccactatatc
      481 tttaaagata ttttccactt tttctttatc tgcgggtttg catttatctg gatgaaattt
      541 gacggcaagt tgtttataaa cctttttaat ctgctgcttt gttgcatcat aggagagttt
      601 tgcaccatct ttaagatggc tgttcaaaag gtctattgca agatatcgtt taagattcgg
      661 attgtctttt gacacacgaa caagtgcctt gactttaggt tttcttgcaa gtataccaat
      721 agtcaaggct gtgacaagtg caaaaatccc tcctgtttta aggtcttctt tttggcgatt
      781 tttttctgca cttttgaatt caacactatc aaaaggtaaa tcccttgttt ttaaggatga
      841 agtattttga ttattatttc tatcttttgn nnnnnnnnnn nnntcggggg tgatggatgc
      901 cgtatttaca ctgccaacca ctattttgct tccttatatc ttgatttagt ctcatgaaaa
      961 cccggaaacc taaaaaattg catggttttt ggctttttat taagatatat tacaagctgt
     1021 tataaaattc ttttaatatt acagcatctt tttccataat cgggctttcg cacacaacaa
     1081 cgcctttgac atcaaatttt ttgaatgctt ttaaaaggtc tttataattc atatcacttt
     1141 cttcaagcag aaggtgtttt ttctcgcctt tttcaccgta ttctatgcct gcaatatgtg
     1201 cgtgaaaatt attgagagca taatcgccaa gctctgtgcc aatggtatca aatattgcgc
     1261 aaaactcgtc gtacgtgttg taaaggccgt ttgtacgtgc gtgaagatga gaaaaatcaa
     1321 cacacggcaa aacctgttta aagttttttg acaattccac tatttcttca aggttccccc
     1381 attgagtggg ttttcctgtt gtttctggac ggacccagat atcgagtttt tcttcatcaa
     1441 gaacagtgca tatttcttcc attgatttat gaacacgctc agagacttct ttagatgatt
     1501 tacccatata aaaagcagcg tgataagtta cggaaaacgc accaaggctc tggcccatgc
     1561 gtgctgtatc aagtattctt ttaacgctgg cttctatttt ttcatcttct ttagagttca
     1621 agtttatata ataaggcccg tgtgcagtga ttaccatatt tttttctttt acgatatctc
     1681 gcacgaggtt ttgattggcc tctgtcattc tgacgccgtg aacaaactcc agctccatac
     1741 cgtccaagcc cagttcttcc agtatttcga aggctctttt atagccggct gttccgttgc
     1801 atatcggctg tcctgctgtt acaaacttta gtgtatccat tattttccta acttttcacc
     1861 tatttggggt ttaaactttt ctataaaact ttttgcatct gaaatcatgt aagagccgaa
     1921 ttgcaaagat tttatataaa gcacaccgct acctgttgca acccccagtg tatcttttac
     1981 gtggcagatg gtgcctggtt cttcttttac ttttttatca gagatttcag aagaataaac
     2041 ttttaagaaa acgcctctaa agtttgtcat tgcactgata aaagggttga gtgctctcac
     2101 aaaacggtct atgtatgcag catctttatc ccagtcaata aagtttctca tgttacgtga
     2161 gtctattgcg ggtgcttttt taaactcgcc ctgcggctgc ggcattgaca caacatctgt
     2221 gttttgttca aaattttgca aaaactcgct caaaaactct gcgcacaaat aattcattct
     2281 attgaataat gtacccattg tttctttatt ttcaatattt actttttttt gcgcaattat
     2341 attgcctgta tcaaagtttt catccataaa atgaagcgtg ataccggttt ctttttcgtt
     2401 attgataatt acattgctgt aaggattagc acctctatag tcgggaagaa nnaaggggtg
     2461 gcaatttaca aagccgcctt tgactgtttt caaaagttca ggcggaaatt ttttgttata
     2521 agaacaaacc acggcaatat ctgcatcaag ttgtctcacc ttgtggataa aatccagctc
     2581 atccattgtt ctttcatatg tgataagggg aaggcggagg ctttttgtga agttgcacat
     2641 tagcccgtaa gttgcctcgg taaaatgagg aggcacaaca cctacaatat taaagccttc
     2701 tgcaacaagt tttgacaggc agataatggc catgtcaggc ataccaagaa aaagaattct
     2761 ttttttgtat ttattttcca caacaaactc ctgtcagcat ttaattcgta actattatac
     2821 attatacact tgattattgc attaagtttt aaatggaata taatttcttt atgataaaaa
     2881 gaattcttat atctataatt tttataatgt ttttatcact ccagtgtgct tttgccgact
     2941 cttcttataa ttttgacggt tttatttctg acaatgcgaa tgttttggat accggtgcaa
     3001 aaaattctat aaatgctttt ttgtgggatt tgcaaaaaaa gacaggcgct gatattgcgg
     3061 ttgttactgt taaatctctt gacggtaaaa gcattgagca gaccgctctt gatgtaggca
     3121 gagagtttaa aatcgggaaa aaaggcgaaa ataccggagc agttgtactt gttgcgccaa
     3181 atgaaagaaa attacgaata gaaattggat acgggcttga gggtattatc cctgacggga
     3241 aagcaggacg aatccgagat gaacagatgc tgccgtactt taggcaggga gactatcaaa
     3301 gcggaatctg gagaggtact tatcaattag cagattacat tgcaagagca tacggtgtaa
     3361 cactttccgt taacgggcct gtgccgcagc agccatcatc cggtgatgat ttcggatttt
     3421 tattattgat tataatcata tttttctgta taagattcgg tatatttcca atatttatac
     3481 cctttggcgg aggatatggc ggtggattta caggacgagg attcggctcc ggaggctttg
     3541 gcggttttgg cggcggcgga gggttcggcg gaggcggagc ctctggagga tggtaaaaat
     3601 taaaggacag taaaaatgac aaaattagat aaatttattg aacaattaaa aaacattttt
     3661 ggctcaaggt taaaatcagt gtttgtttat ggtgctaagg caggtgaaaa agctgataac
     3721 ctgttgcaag acgtggattt gatggttctt gtaactgatt tgcgcggcga agatataaaa
     3781 aaatgttcta aaccggcgag agaatggatg ggcaagagtt gtattttttg cagcaaaagg
     3841 aatgcactgc ctgtttttat gggagaaaaa gagtggtaca actcatctga tgtgtatgcg
     3901 atggaataca gtgatataaa agaaaaccac aaaattcttt atggagaaga tttgatatgt
     3961 aatataaacg tcaacaggga tgatttacgg ctgcaatgtg aggctgaaac aaagaatctt
     4021 ttaatgcagt ttcgtgcaca ttatcttatg aatgcgcata gccacataat gctgcaaaaa
     4081 agtcttgtgc ccctgacaaa gacattaaac gcaattttta aggcaatttt gagaataaaa
     4141 aatattgaag tatcaaagtc accttatgaa aatttgaaca agatacactc gctttttgct
     4201 atcaacaaaa gtttttatga aaagctattg tgccacaaag aaaaacactg cactcttaat
     4261 aagaaagagg ccatagatac cgcagacact gccgtggcag agctacaaaa acttttggat
     4321 tacgtaaaca acttataaaa ggagaaaaat atgaaaaaa
//
LOCUS       DABS01000002            7831 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_8090, whole genome shotgun sequence.
ACCESSION   DABS01000002 DABS01000000
VERSION     DABS01000002.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7831)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7831)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7831
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(78..299)
                     /locus_tag="CPT85_00035"
     CDS             complement(78..299)
                     /locus_tag="CPT85_00035"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27239.1"
                     /translation="MDIVKNLRDVSLNEDARFFADLIKDEFGYDTCVEKIKNIEFLQR
                     YAKPLHDFNIYTTAQPTAEGMRMVAWKRR"
     gene            complement(386..1126)
                     /locus_tag="CPT85_00040"
     CDS             complement(386..1126)
                     /locus_tag="CPT85_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014968087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="DAB27244.1"
                     /translation="MDSKNYTINIAHLYPKLLNIYGDWGNVLTVKNRCEWRGIDVNID
                     SIGIGDTIDIKKYDFYFMGGGQDQQQIAVSKELQKHKASLQDAADENAVFLAICGGYQ
                     LLGHYYQPHNAEKLLGISLLDAYTEAGDKRFIGNVTAKSDFITPDTLVGFENHSGLTY
                     LKNETRPIAIVETGHGNNGKDKTEGARYKNVFGTYLHGSFLPKNPHFADYLISLALHK
                     RYKEEIDLTKLDDEFENLAHSALVNKKY"
     gene            1201..1431
                     /locus_tag="CPT85_00045"
     CDS             1201..1431
                     /locus_tag="CPT85_00045"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27240.1"
                     /translation="MKKSLKLLILLVLCLAVINNQEAQAYINPGSGSYIFQTIIGGIL
                     GIFYLFKKMFLAVIGIFKPNKKHMQNDTQSDD"
     gene            1424..3289
                     /locus_tag="CPT85_00050"
                     /pseudo
     CDS             1424..3289
                     /locus_tag="CPT85_00050"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2468..2483
                     /estimated_length=16
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3434..3505
                     /locus_tag="CPT85_00055"
     tRNA            3434..3505
                     /locus_tag="CPT85_00055"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:3466..3468,aa:Lys,seq:ctt)
     gene            3642..4157
                     /locus_tag="CPT85_00060"
     CDS             3642..4157
                     /locus_tag="CPT85_00060"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27241.1"
                     /translation="MWVDELYVFNLANHSSVLTTISQTLTTDLHAPVFFVMVHYWIKL
                     FGTQDSLLLVLPVMFSWLMIATGWFVCKKLFNTSAAVIYTLLATFNCLEIYYAKELKF
                     YSLLPLLGLLSFYFFSKITEVDTTKTFCKKDALWLALINLLIIYTFNIGIXNICVYPI
                     LDRFVLCLIQK"
     assembly_gap    4098..4099
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4451..5266
                     /locus_tag="CPT85_00065"
     CDS             4451..5266
                     /locus_tag="CPT85_00065"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27242.1"
                     /translation="MEYTRQLLXSKNTKNLLLIIWSSVSILAMCILAQLDIVPVLTRY
                     VIIFHAILIMSVSYGLSLIKNKKALFVTICLIALPFITTLVSSHSPALGRSSAHSDAA
                     AVLKNAAHIKNTDFVLMPYMGQFLYKYLPDSKYIDFQIDEILFKDNAQFSGKTFINSN
                     NLNDFARTKQSSAVVEEYLSEYLSLMKKGDRLFFVQSYLAYVIRDDIYIEVANNIDLD
                     AKNLNKTQKAVRFRILYTKMQSDILAVLRKNLKLTHIYNAQSMDLKIYEFEKF"
     assembly_gap    4476..4477
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5434..7344
                     /locus_tag="CPT85_00070"
                     /pseudo
     CDS             5434..7344
                     /locus_tag="CPT85_00070"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    5458..5503
                     /estimated_length=46
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7437..>7831
                     /locus_tag="CPT85_00075"
     CDS             7437..>7831
                     /locus_tag="CPT85_00075"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27243.1"
                     /translation="MQIQNINFANFSKLNNQNYNNKQINQQTQNQQIYATSLYNVPKA
                     TIPLNYKFNTKISFGEFFDPNRTVPHIDYEEYRAMNNYTKKRFRKRYEKFFNDPTINK
                     KELVDSKFKYMPLQTERSMDEFLKIAKMYA"
BASE COUNT         2764 a         1421 c         1205 g         2375 t
ORIGIN      
        1 taacggattg gaaaaagaat acaaaaaaaa accgcctacg aaagtaagcg gtttttttgt
       61 attcttttta attgatttta acgtcttttc cacgcaacca ttcgcatgcc ctctgccgta
      121 ggctgggcgg ttgtataaat attaaagtcg tgcaaaggtt ttgcgtagcg ctgcaaaaac
      181 tcgatgtttt tgattttttc tacgcaggta tcatagccaa actcatcttt gatgaggtcg
      241 gcaaaaaatc ttgcatcctc gtttagagat acatccctta aatttttgac gatatccata
      301 tattctcatt ttatactttt gtatgagaaa atacttcaaa agttataaaa cttatataaa
      361 attgatacaa tccttaacat gaaaattagt attttttgtt caccaaagca ctgtgagcaa
      421 ggttttcgaa ctcatcatcc agttttgtaa gatcaatttc ttctttgtat cttttgtgaa
      481 gcgcaagtga aataagatag tccgcaaaat gcgggttttt aggcaaaaat gacccgtgaa
      541 gatacgtacc aaagacgttt ttgtaccttg caccttctgt tttgtccttg ccgttgttgc
      601 catggcctgt ttctacaatt gcaatgggac gggtttcgtt tttaagatat gttaagccgc
      661 tgtggttttc aaaccccaca agagtgtccg gtgttataaa gtcactcttt gccgtaacat
      721 tgccgataaa tcttttgtca cctgcttctg tgtaagcatc aagaaggctt atgcccagaa
      781 gtttttctgc attatgaggt tgataatagt ggccaagaag ctgatatccc ccgcatatag
      841 cgagaaacac cgcgttttca tccgcagcat cctgcagcga agctttgtgt ttttgcagct
      901 cctttgacac agcaatctgc tgctggtcct gacctccgcc cataaaataa aaatcatatt
      961 ttttgatatc tatcgtatca ccaatgccga ttgaatcgat atttacatca atacctcgcc
     1021 attcgcagcg attttttaca gtcaaaacat tgccccaatc tccgtatata ttgagcaatt
     1081 tagggtaaag atgagcaata ttgattgtat aatttttact atccatgatt tcattattgc
     1141 aaaaaaataa cttttttaac atttttgccc cacagatagt gattaattat aatttatatt
     1201 atgaaaaagt cgttaaaatt acttatattg cttgttttgt gtttagctgt catcaataat
     1261 caggaagcac aggcctatat taacccggga tccggaagtt atatttttca aacaataatt
     1321 ggcgggatac tcggcatatt ttatttgttc aaaaagatgt ttttggcagt tattggtatt
     1381 tttaaaccaa acaaaaaaca tatgcaaaat gatacccaat cagatgatta gtcagacaat
     1441 gtattatctt tatccgctgc tattatgcac attgcctgtg catgctatat ttgcacagaa
     1501 tatgaaagaa gttgaatcaa aaaattatgt agactctctt ttgattgttt gcgccattac
     1561 aattgcaggt atttttggag ttaacaaact tgtgcacaac atgtttttgg ctgagttgat
     1621 attttgtacg gtatttttcc tgctgcttta ttgcaacaat atttatttat attgtgtgag
     1681 cagattttta tggaaagaaa aaaacaccta tatccttttt aagattttat atcttatttt
     1741 aagcattgca gcaggtcttg gagtttatta catttttcac actgtaaatc ttttgatttt
     1801 gtctaaggtt ttgttttatt tttccgcttt tgtaataatt acaatgcttg caaacaattt
     1861 aaacaacaca aaaacttcgg tagaaatatc attgccggag aacttgattg agagcacaaa
     1921 agacaaaaac ttgcctgata tttatcacat agtgcttgac tgccacattg gttttgacaa
     1981 agaaggttac aaagactctt atttttttga agagctcgaa aaacaaggat tttgtaacat
     2041 aacaaaattt aagagcaact acaacctcac ccacctttcc atgccatcca tactaaatat
     2101 ggaacacata cctgtgcttt tgaacaaaga caagacagat ttttaccctg agtcggttac
     2161 gttttcttat tacagcaaca acaaactatg gaaaatactt gaacaattaa actatgagat
     2221 aaacctgacc gtaaacccga tgtttaacaa aatagtgcag aattctcaaa tcaaaacaaa
     2281 taactatttt ttgaaaggca taaatgctaa tttaagattg ttgtgttttt cttctttctt
     2341 ttcatttttg ttaataccgc taaaaaaatc atttaaaatt tttgaagacc aatttgagtt
     2401 gtacaaatca ttttgcaaaa acaataaaga taaaagtggc agaatctata attttatgca
     2461 tattttannn nnnnnnnnnn nnnttgatga aaacgggcaa aaattttcca gaaaacaaag
     2521 caatgatttc aaaaattatt atagctattt aaaatacaca gataaaaaag tgctggaatt
     2581 aattaataca ataaaacaaa acatgaaacc aaactccatc atcgtaatac acggtgacca
     2641 tggattacaa aaaaccgtga attcttgctt taatacctta tgcagcattt actacccgga
     2701 caaagactat agcaatatcc cttcagaact tacgggtgtt aatttgtttc gcagtgtatt
     2761 gaacaaaatt ttgggcacaa aaattgaaga taaacctaac ttgtattttg caacagatat
     2821 aatatcaaaa aatatcatcc acgaaattga tatcaataat acacaacaac aaaattcaga
     2881 cttcaaccct tgtgactaca aaaaaatata tgatgtatta tgtaaaaaat acaaaaacaa
     2941 aaaggtggta ttgtatggag ccggaaaatt ttttgagttt ataaaagaca attttgacct
     3001 gtcaaaattt aatataattg cggtttcaga tttaaaattc aatgaatttg attctccaaa
     3061 acaccttgaa aacataggat tcaaagttat tgccccgcac aaaatacaca cccttaaacc
     3121 tgatatcgta attatttgta cagaaaaact tatcccgata atgaagtatt ttaaagaaga
     3181 gcttttcaaa aatacgggca aaaggtttaa gtacacatct tttgtaaaca gcagcaaagc
     3241 gtataaagag ctgcaaaaaa ttgaatgggc aaaagtatta tttccttgac gcaaaaccct
     3301 taaagtcgta atatgagtat acgcaagggt gagtggcact ctgccgaaca aaacgattga
     3361 gtatcgtttt gtgagaggaa ggtagcgcaa gcgctgccac tgctcgatga tttgataatt
     3421 gaatacttta attgggtgag tggcgcagtg gtagcgcagt tgactcttaa tcaattggtc
     3481 gtgggttcga atcccacctc acccaaaact taataaaaca ccgcattgtt cgaacccaga
     3541 acttatacca catgaaaaaa cacacgtgca ctaccttata ccttgtaatc ttttgtataa
     3601 tagctttaat tctgcgggcc tatcatataa cagacaaaac attgtgggtt gatgaacttt
     3661 atgtttttaa ccttgcaaac cactcaagcg ttttgacaac catctctcaa acgctcacaa
     3721 cagacctgca tgcacctgtg ttttttgtaa tggtacatta ctggattaaa ttgttcggca
     3781 cacaagacag cctattactg gttttaccgg ttatgttttc ctggctcatg attgcaacag
     3841 ggtggtttgt ctgcaaaaaa cttttcaaca cctctgctgc agtcatttat actttgcttg
     3901 ccacatttaa ttgccttgag atttattatg caaaagaatt aaaattttac tctcttttac
     3961 cattgctagg gcttttgagt ttttatttct tttccaaaat aacagaagtg gataccacaa
     4021 aaaccttttg caaaaaagat gcactctggc tggcactgat aaatcttttg attatttata
     4081 ccttcaacat aggtatannt aatatttgtg tttatccaat tcttgaccgg tttgtgcttt
     4141 gtcttataca aaaataaaac tgcggtcaaa aaatttgtca tatcgttttt atgcacattt
     4201 gtgttatatc tgccttactt ttactttcaa ataaataccc taaaaagcag taaaagcggc
     4261 atatgcacaa tcactgacct gttttatttt gatttcagct ttattcaaat tctttttcaa
     4321 aacttcttta cacccctttt ggataatctt ggcaacaatc aaataaatta caatatattt
     4381 tctactatcc agagctttaa tatagctgga tttttattct ttattcttat tcctctggca
     4441 atctctgttt ttggaatata caaggcaatt gcttcnntcc aaaaacacaa aaaaccttct
     4501 gcttataatc tggagctctg tatcaattct tgctatgtgc atacttgcac agcttgatat
     4561 tgtacctgtt ttgacaagat atgtgataat ttttcatgca atattgataa tgtctgtgag
     4621 ctacggcctg tcattaatta aaaataaaaa agccctgttt gtcacgatct gcctgattgc
     4681 tttgccattt ataacaacac ttgtatcttc tcattcacca gcactgggcc gaagctctgc
     4741 ccactctgac gctgcagctg tgctcaaaaa cgcagcacat ataaaaaaca ctgattttgt
     4801 ccttatgcct tatatgggac aatttcttta caaatatttg cctgattcaa aatacattga
     4861 tttccaaatt gacgaaatac tttttaaaga caatgctcaa ttcagcggaa aaacttttat
     4921 aaactcaaac aatctaaacg attttgcaag gacaaaacag tcttcggcgg tggttgaaga
     4981 gtatttgagc gaatacctgt ctttaatgaa aaaaggtgat agattgtttt ttgtgcagtc
     5041 ataccttgcc tatgtcataa gagatgacat atatattgaa gtggctaata acatcgattt
     5101 ggatgcaaaa aatctgaata aaacacaaaa agcagtaagg ttcagaattc tgtacacaaa
     5161 aatgcagtct gatattttag cggttttaag aaaaaattta aaattaaccc atatctacaa
     5221 cgcgcagagc atggatttaa aaatctatga gtttgaaaag ttttaaaaat tcttgtaaat
     5281 ttttttaata acaacagtaa taatatagca atttttcata ttcagcggtt ttatagcctc
     5341 atatgaaaat tctccccgta attcataaca acagtttgaa tttgctatgc gcaaaaaaat
     5401 atctcgcttc tacaataaac tccaaaagcg atgatggctc aatgcgtcca aaatcagnnn
     5461 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnntaaaaaa cctggacaac
     5521 ttgcattgcc cgctttgcgg tacaaaaatg ttttccaaaa aagaatctgc tgcagctatg
     5581 gaagaagcca aaacagtaaa aacacccgaa gacctgtgca agtatcttga aaaatacaac
     5641 gagcatataa atccagagtt taagccgatt ttaaaagatg caaaactcaa attctacaaa
     5701 aatacatttc cggatataga cagttttttg gaaagtttaa gaaaagatta ttacaaaaaa
     5761 accaatcata cgatagaaaa aacctttgaa actatcgaca attttatcaa tgatgaaagc
     5821 ctgaacgcac atgacaaaga cctgctttta aaatgcagaa aagattttta tgaagcagca
     5881 caaaacaaat cgcacaaatt tattttaaaa agattgaccg atatattaag agaaactgct
     5941 gcttttttgc agtctgaaga aaaacaccat atctatactc aaatactaaa accgctcaga
     6001 atgtctgcaa aagctgaatt cctattcgac agcagagaat tgaacaataa tgacaacaga
     6061 caaatggcat ttttgcgcaa catgttttat tattccaact cagatattca taaagtcaac
     6121 aacaaaatgg aagcccaaaa cgacagcata ttaaacatga tgctgagttg tgaaaactgt
     6181 gctatcgaaa aaaacaatat tttccgtctg aatgaccacg catcaaggct ttatttttac
     6241 aatcatattt cagaattgtc acaacatgca ctaaacggac gcatagaaag caacaaagcc
     6301 tatccgctaa aacttattgc actggtcaga gagctgtctt ttaataaaat aaaccctgat
     6361 tataatgctg aacctatcaa aaaactgtcc gaaacaacag gtgttatcaa caataaagat
     6421 tgcgactttg agcttgtctc ttataaagat atgccctgca taacttgcgg gcaaaccact
     6481 atcacgcacg aacaaaaatg tgatatttac gaaaaaatca aaaatacaac tactccctat
     6541 gagctggcag aaataataaa cgaaaacatt gacctggtaa aaagaaaata tctggaagtg
     6601 gcggatgaaa taagttttga aatagccaaa aagccctcta tcaaagacga tgagctgcta
     6661 caaaaccttc gcaaatacaa aaagcaaaaa aatgaacaac tcttgagcgg tttcataaac
     6721 tacggccacg ctgcaataaa aaaatacaac ctccacaaaa aagacaaaga gcgtatgact
     6781 gcatatttga aagcagtcaa agagttaaaa gacgacttaa aagaagattc accgtttgat
     6841 tatgaaactt attacaaggc attaaaagac actgtcggca aaatggatac acctcatgaa
     6901 aaagaaatgt ttaaggaatt aaaattgcct gccagaactg cttttttatc ccatcttcta
     6961 cttttcccca aaaaagaaac cactgaaaaa gtaggtacag cactgaaagt aatggcacag
     7021 gacctgttta aaaactctgt agcgaccacg gcaaacctta ataaaatggc agaccctcat
     7081 gacaaagcct acaggcgcaa caaaccctct gacaaagttg ttatgtgcag aagctgccag
     7141 aatgaactta acggaaaacc aatgagccta tgggctgacg cctatcctga aataaaagaa
     7201 aacatgtcaa aaaacctaag aaaagcagac gaaattatta gaaaaaacaa cataaaaggt
     7261 tacgaccttt atgcatatga agttgtacaa aacctaagaa ggctctccga aggccagatt
     7321 gatatttctt taaactccat ataactttac aaatattaat atttgctttt ttattaacaa
     7381 atttttattt attcagactt atattattac catggcaaca acacaggtaa taaaaaatgc
     7441 agattcaaaa cattaatttc gccaatttca gtaaactgaa caatcaaaat tacaacaaca
     7501 aacaaataaa ccaacaaacg cagaaccaac aaatttatgc gacatctttg tataatgtac
     7561 caaaggcaac tataccatta aactataaat tcaacaccaa aatatcattc ggcgaatttt
     7621 ttgaccccaa cagaactgta cctcatatcg attatgaaga atacagagca atgaacaatt
     7681 atactaaaaa acgattccgc aaaaggtatg aaaaattttt caatgatccg acaattaaca
     7741 aaaaagagct tgttgattcc aaatttaaat atatgccatt gcaaacagaa cgttctatgg
     7801 acgaattttt aaaaatagca aagatgtatg c
//
LOCUS       DABS01000003           15663 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_7638, whole genome shotgun sequence.
ACCESSION   DABS01000003 DABS01000000
VERSION     DABS01000003.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 15663)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 15663)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15663
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..1067)
                     /locus_tag="CPT85_00080"
     CDS             complement(<1..1067)
                     /locus_tag="CPT85_00080"
                     /inference="COORDINATES: protein motif:HMM:TIGR02669"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27229.1"
                     /translation="MRFNKVLLFLIFTIFLTATQPSNAISANQGKMVRVGISDVKFQN
                     YYYNTINITATDSFRLTDKATNSIIADFGALEDVNITIKDNCFIVKQGTTTIANGLEG
                     PITAESDNGFVTVKNLKRAGQNAYYRGTFEITKAPQKVNQFNLINVLDLQSYLKGVVP
                     NEMPVRFGLEALKAQAVLARSYVLKPRERNYHNFDVCDSVACQVYFGANTEKELSDKA
                     VDETDNIVAMSDNELVLALYSSTAGGYTESYENAFSIDMSNGVRVFPGSPRAFLKGVP
                     DDPKTPVLNTEEAARKFYTTNPETFDNKSPYFRWTKEWEKTELENILKQTLKTQSQAG
                     FVKPKFEKPEDFGSLKEIKVT"
     gene            complement(1183..1722)
                     /locus_tag="CPT85_00085"
     CDS             complement(1183..1722)
                     /locus_tag="CPT85_00085"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27230.1"
                     /translation="MFAGLGGEAGKVVQIPYAEMPQKTLLFPGKGGNGGKGSNITYHN
                     TANTPGGNGQSSYIKNGTQIYGGKGASGINPADDSTYSSKFNDDQMPVGGDGLLADVL
                     TNKKVGTGGLGGFSGNNNTINGLTETIFEDGALVSGFNKIFGAGSGGGGASAAADSTG
                     SVQLGDGGNGASGLVFIQW"
     gene            complement(1784..2938)
                     /locus_tag="CPT85_00090"
                     /pseudo
     CDS             complement(1784..2938)
                     /locus_tag="CPT85_00090"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1805..1839
                     /estimated_length=35
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3347..>3685
                     /locus_tag="CPT85_00095"
     CDS             3347..>3685
                     /locus_tag="CPT85_00095"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27231.1"
                     /translation="MSVTAWAIAFFFGVSNHGNIFFALTALAGIVCAHLGANLFDDIL
                     DYKKYLKSQKDPDNSKKLNFKKGKCKCFLNNELTVEAALKICAVLFFIAIVIGLFFTV
                     IYKLPIILIMA"
     assembly_gap    3686..3784
                     /estimated_length=99
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3937..4188
                     /locus_tag="CPT85_00100"
     CDS             3937..4188
                     /locus_tag="CPT85_00100"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27232.1"
                     /translation="MHITFIFXXXMIYALIFVGIHSHLFPLKYAIIFLSVIPALGTVK
                     RLQHYIDKEIKDEKEFLSAMNNVQKFVAIFAILCIVSFF"
     assembly_gap    3960..3966
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4165..5310)
                     /locus_tag="CPT85_00105"
     CDS             complement(4165..5310)
                     /locus_tag="CPT85_00105"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00072.22,HMM:PF01966.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator"
                     /protein_id="DAB27233.1"
                     /translation="MENFALLKEDSFEESLGEILQVNPKNEKHTILLVDDEVNNLQLL
                     RRTLRHDYNILTASNGKEALEIVEGKGSEIALIVSDQKMPEMEGTEFLKRVAGEYPDI
                     VKILLTGHLDVDAIVDSINDCHLYQYIVKPFDPEELKLTIETGIQKFDLVNNKTVILK
                     DLRELFYKTIKLIASALDAKDPYTHGHSLRVTMYSLILAKKLNLDDTTLEEIETAGLL
                     HDIGKIGIPQSILCKPGKLTDEEYEVMKSHPAQAEKMLMGIKKLTVVSNWLRTHHERW
                     DGKGYPYGLKGEEIPISGRIIALADTYDAMTSTRSYRKALSHETAMEEIKRCAGTQFD
                     PVLADLFISCSDEIRAAKDDPDTYYPKYSYLQKMIYETRYSKKAHNA"
     gene            5532..7400
                     /locus_tag="CPT85_00110"
     CDS             5532..7400
                     /locus_tag="CPT85_00110"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00571.26,HMM:PF03471.15,HMM:TIGR01297"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27234.1"
                     /translation="MSSDSYNLETKNNDEISTEESIQEKADNSKFMAVIKALIANLGI
                     ALVKLICFFFSSSSAMLAEAIHSGVDSFNSICLLVGIKRGSRPADNAHPFGYGLEANV
                     WAMFASILMLGGTFVAIYHGFEKLLHAEETNDLLVHYNAIAIALICSIMFEAWAVISA
                     SKAVLHEVGIEEKNPVKEFFRSIKYIGEIKSPTTKFVWYEDTAALTGVIVAFVALTLA
                     KFVMPSNLAYVPDAIASVIIGTILFFLAIYLLKNNVNSLTVQSAEPDVEEKIREVAST
                     IHGITGVIELKTIDLGSSGLIINMTIEVDPETQMKDADDIADMLERKIKKVIKNITHI
                     TIELQAHDAEDNWEEKFTKLIKEGEKIGTIDNHEATMLQNFFGFANTVVREIMVPRTE
                     IFMVNVEENINELADMIISSGHTRIPVYRDNVDNIIGVINAKDVLKVIKNNHVDEHFS
                     IEFLARELLIVPENKFISDLLSDFTSSKNQIAAVVDEHGGIAGIVTIEDILEEIVGEI
                     YDEFDKVETPEVVKIDEHTLNVSCKMDIEDINERFDLDIPNEDFQTIGGYVFGLLGRE
                     PELNDVIEDKNITYTILEIDGRRISRIKMCKETPFVDATEITEEHEAQQDEQPAQE"
     gene            complement(7430..7843)
                     /locus_tag="CPT85_00115"
     CDS             complement(7430..7843)
                     /locus_tag="CPT85_00115"
                     /inference="COORDINATES: protein motif:HMM:PF00534.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27235.1"
                     /translation="MFRYLSATSENIRARIEFSAPLGNLMYAGADMFLMPSAFEPCGL
                     SQLISLKYGTAPIVRATGGLDDTIVGYPMDKGDGFKFWNYSPYAMMDCIRYALNIYKD
                     KRDWAQIVQNAMNADFSWDKSAQKYVDAYNQALGR"
     gene            complement(7929..8165)
                     /locus_tag="CPT85_00120"
                     /pseudo
     CDS             complement(7929..8165)
                     /locus_tag="CPT85_00120"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    7937..7954
                     /estimated_length=18
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(8128..8404)
                     /locus_tag="CPT85_00125"
                     /pseudo
     CDS             complement(8128..8404)
                     /locus_tag="CPT85_00125"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     start; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    8136..8160
                     /estimated_length=25
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    8405..8455
                     /estimated_length=51
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<8456..8832)
                     /locus_tag="CPT85_00130"
     CDS             complement(<8456..8832)
                     /locus_tag="CPT85_00130"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase"
                     /protein_id="DAB27236.1"
                     /translation="MKIMFVSAEVAPFSKVGGLADVVGSLPKVLEKMGHEVAIFTPLH
                     GCIDQHKYGIEELENSKLTIDYSYGQYYFNLKMAKLPGTKNVNVFFLDNNKYFAPFHE
                     VYPRNIDTRYEHERFIAFSHAAI"
     gene            complement(8979..10784)
                     /locus_tag="CPT85_00135"
                     /pseudo
     CDS             complement(8979..10784)
                     /locus_tag="CPT85_00135"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    9022..9032
                     /estimated_length=11
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(10812..12623)
                     /locus_tag="CPT85_00140"
                     /pseudo
     CDS             complement(10812..12623)
                     /locus_tag="CPT85_00140"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    11145..11167
                     /estimated_length=23
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(12809..14443)
                     /locus_tag="CPT85_00145"
     CDS             complement(12809..14443)
                     /locus_tag="CPT85_00145"
                     /inference="COORDINATES: protein motif:HMM:PF13520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="DAB27237.1"
                     /translation="MSQNDVTEAGLVENFVSNLLKTKNPDDMLAQSKETGLKKTLNWV
                     DLIILGIGAVIGAGIFSMVGSAVVGTPGHPGAGPALIISMIIAAIACIFSALCYAEFA
                     SMIPVSGGVYTYTFATMGELAAWMVGWVLMLQYTIGNIAVACSWTGYLLQFLRGFEPY
                     TAHLPAALQGIAHHIMYPPLWLVNDYATAKEAYLKMGLNPADHIPHLLGFIPFSVNIP
                     AILMILLVTSILVKGISESKNMAGIMVIIKLVVIGLFIGVGAFYVKPDNWTPFMPNGI
                     GSVLISAFTIFFAYTGFDAISTAAEETKNPQKDIPIGIIGTLVLCTIVYIFVALVLTG
                     VVRWDAINIHAPIAHAMQMTGQGWVAGLISVGALTGLTSVLLVMQLAATRILFSMARD
                     NFFPSILKKVHPVYKTPHVITWVVGIAMVIGCMFLDLNLAAQLCIFSVFTSFIIVCVG
                     VLILRKTDPERHRPFKVPFSPWFPAMGIILCGGLMVVAITSMGKTALLFPLWLAIGVG
                     IYAGYGYKRNRRIERIEEKRQSNKEAREQASLSKYE"
     gene            complement(14459..15355)
                     /gene="glyQ"
                     /locus_tag="CPT85_00150"
     CDS             complement(14459..15355)
                     /gene="glyQ"
                     /locus_tag="CPT85_00150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015223503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="DAB27238.1"
                     /translation="MALTFQELILNLSKFWSDYGCIIQQPYDIEKGASTMNPATFLRS
                     LGPEPWNTAMVEPCRRPTDARYGENPNRLGHYFQYQVILKPSPDNAQELYLKSLEAMG
                     IDLSQHDVRFVEDNWESPTLGAAGVGWEVWLDGMEITQFTYFQQVGGLEIKPVALELT
                     YGLERIAMYLQNVNSVYDVMWNKELKYGEIYLQNEIEQSKYNFEVSSADKLFKMFDLY
                     QEEVENCVENKLVLPAYDYVLKCSHTFNLLDARGVISKDERINFINRVRRMAAMVAKL
                     YVEQREELGFPLLKNKTQKVTI"
BASE COUNT         4254 a         3410 c         3020 g         4710 t
ORIGIN      
        1 cttgttactt ttatttcttt taaagagcca aaatcttcgg gtttttcaaa ttttggtttt
       61 acaaaaccgg cctgtgactg ggtttttaac gtttgtttaa gaatattttc cagctctgtt
      121 ttttcccact cttttgtcca tctgaaataa ggcgacttgt tgtcaaaggt ttcaggattt
      181 gtggtataaa actttcttgc tgcttcttct gtattcagca caggggtttt gggatcatcg
      241 ggcacgcctt ttaaaaaagc tctgggtgag cccgggaaga ctcttactcc gtttgacatg
      301 tctatagaaa aagcgttttc atagctttct gtatatccgc ccgcagtaga gctatacaaa
      361 gcaagcacca gctcattatc actcattgcc acaatgttgt ctgtttcgtc cacagctttg
      421 tctgaaagct ctttctcggt attggcgcca aaatacacct gacacgcaac agaatcgcat
      481 acgtcaaaat tgtgatagtt gcgctctctt ggttttagga catagcttcg tgcaagcact
      541 gcctgtgctt tgagtgcctc aagcccgaat cttacaggca tttcgtttgg tacaacacct
      601 tttaagtaag attgcaaatc cagaacattt atcaaattaa actgattaac tttttgtggt
      661 gctttagtaa tctcaaacgt gccgcggtaa tatgcgtttt gtccggctcg tttaaggttt
      721 tttacggtca caaatccatt atcggattcc gctgttatag ggccttccag cccgttggca
      781 atggttgttg tgccctgttt tacaataaaa caattgtctt ttatcgtaat atttacatcc
      841 tcaagtgcgc caaaatccgc tattatggag ttagttgctt tatctgtcag gcgaaaactg
      901 tctgttgcag tgatgtttat cgtattgtag tagtaatttt ggaatttaac atcgcttatg
      961 ccaaccctca ccatcttgcc ctgattggca ctaattgcat ttgacggttg tgttgcggtt
     1021 aaaaagattg tgaatattaa aaataataaa actttattaa atctcaacgt gagccccctc
     1081 tttttagtat tattttataa taaaaacaaa gaaaatcggc tttttcttaa cattaaaaaa
     1141 agcctccctt aaaaaaaggg aggcaaagta ctgtattaga aattaccact ggatgaacac
     1201 aagaccggaa gcgccattgc cgccatctcc aagttgaacg gagcctgtgc tgtcagctgc
     1261 agcgcttgca cctccgccgc cggagccagc accaaaaatt ttattaaaac cactgactaa
     1321 agcaccgtct tcaaatatag tttctgtaag tccgttaatt gtgttattat ttccggaaaa
     1381 tccgcccaaa ccacctgtgc cgactttttt atttgtaagt acatctgcca gtaaaccatc
     1441 accacccaca ggcatttggt catcattaaa cttactggaa taagtggagt catcagcggg
     1501 atttataccg gaggcgcctt ttccaccata gatttgtgtg ccatttttga tatatgatga
     1561 ttgtccatta ccaccagggg tattagctgt attgtgataa gttatattac tgcctttacc
     1621 gccatttcca cctttgccgg gaaacaggag cgttttttga ggcatttctg catacgggat
     1681 ttgaactact tttcctgcct caccgccaag accggcaaac aaaggcttgt attttatagc
     1741 agctaggcca gaccctccgc taataggttc aaaatattct tcatcataat cgccttctgc
     1801 cgcannnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnt tttccaggtt gaagagctat
     1861 tgcaccactt tgtagacctt ttggacaata tattataatt catatcaaat attccgttat
     1921 aattagtcaa tgaacttacc aaattataag gataccaacg attctggtgc gagctggaac
     1981 ccaaagaacc ggatactttt ttgcctttta tgacaacagc tgaagctata tcagagctgg
     2041 ctgtgccgcc atcacatgca tacacttttg caaaaactgt tgagtagccg ggcccaacag
     2101 acctatcgct tttatttatt ctgacttttt gagccccgat gccttgcaac aatccccaaa
     2161 taacgtgctc gcctgatgac gtacaaccgg atacatagtt ttcatcattt ccgtcaccgg
     2221 attttgtaaa ccacagatgc catcccggac ctccggcacc gccgcctgca aaggcatatg
     2281 ttatatcatc agaaacattt tttacataag attctgtacc gctgacacct tcaccatccc
     2341 agctgccgtt acctccttta ccaactctta cattaagaga gacacctttg ccaataaata
     2401 catttggaac ataaacaagc ccaccgtttg aacctatacc ggcaagtcta ttcggctcac
     2461 tgccgaacat tccgccgccg ccacctccac cgcctacaac aagcattgta tacaagccgg
     2521 attgcggagt tttgtatata taatcgcctg cagtaccata attttgtatt acttgtgaat
     2581 cggtttgtat agtggcggaa ccggaaccac cgcctccgcc gccaactatt gtagcgacaa
     2641 agtttttggc atttgatgga ggattaaatt cacagccgtc gcggccttct tctgtgtcat
     2701 atattacttt gccgtctgag actactccat ttatcacata ttttgaaact agttgattat
     2761 ctttccaata acaagcaaaa gctccgtgtg gaacattcat tttggctcgg tgttttttgg
     2821 ttattacagg ggccgatgct attgcaataa cgcatattat cagcagcgtt atcaatgctt
     2881 ccaccagtga gaacccagcg attctctttt cataaatctt tttctgtgac gctttcattt
     2941 cttctccttt gcagattatt tttatgatat atctgctgtc ggacactttt gaagatatct
     3001 tgatactatt taccgtcact taccttacct tacagaaaag cttacggggc ctggtttttg
     3061 acgtcaagaa attcgtgttt acatttcttt atattttcga ttttcggtaa tatttgttta
     3121 cataaagaaa atcggctttt tcttatacag attaagccga gatggataga attagtatta
     3181 cggagtttat agaggagttt acacatgcat gaaatacgga taaaaaattt tttgctactc
     3241 atgtgcttat atgtaaacaa atattaagct ggatttttgt ggtatcttta aaagtatgaa
     3301 taaattagca ttttttatgg agtgtacacg aatttattcg cttcccatgt ctgttacggc
     3361 gtgggcaatt gcgtttttct tcggtgtttc aaaccatgga aacatatttt ttgctctcac
     3421 cgcgcttgcg ggcatagttt gtgcgcacct cggggcgaac ctttttgacg acatacttga
     3481 ttacaaaaaa tatttaaaat cacaaaaaga ccctgacaac agcaaaaaac tcaacttcaa
     3541 aaaaggcaag tgcaaatgtt ttttgaataa cgagctgaca gttgaagcag cactcaaaat
     3601 atgcgctgta ttgtttttta tcgcaatagt gatagggctg ttttttacgg taatatacaa
     3661 gctcccgatt attttgataa tggcgnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     3721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     3781 nnnngacagg agctttgtct tacaggcttt tatggctttc tttatcgttt gcttttgtta
     3841 ctgtttgtct tttgtacacg gacttttttc ttgatttcaa tcaggacaaa gcagccggca
     3901 aaaagaccat accgatttta acaggcagca aacaaaatgc atattacttt tatatttttn
     3961 nnnnnnatga tttatgcgtt gatttttgta ggaatacatt ctcatttatt ccctctcaag
     4021 tatgcaataa tctttttgtc cgtaataccg gcacttggca cagtaaaaag attgcagcat
     4081 tacattgaca aagaaatcaa agacgaaaaa gagtttttaa gcgcaatgaa caacgtgcaa
     4141 aagtttgtgg caatatttgc aattctatgc attgtgagct ttttttgagt atctggtttc
     4201 gtaaatcatt ttttgaagat agctgtattt ggggtaatag gtgtcggggt catcttttgc
     4261 cgcacgaatt tcatcagaac agctgataaa aaggtctgcc agaacagggt caaactgtgt
     4321 gccagcgcat cttttgattt cttccattgc tgtttcgtga gaaagcgcct tacgataaga
     4381 acgcgtggag gtcattgcgt catacgtgtc tgcaagggca ataatacggc ctgatattgg
     4441 aatttcttct ccttttaaac cgtaaggata gcctttgccg tcccatcttt cgtggtgggt
     4501 acgcagccag ttggatacaa cagtcagttt ttttataccc ataagcattt tttctgcctg
     4561 tgcagggtga gatttcataa cctcatactc ttcatccgtt agttttccgg gtttgcaaag
     4621 aatgctctgc ggaataccga ttttgcctat atcgtgcaaa agacccgctg tttcgatttc
     4681 ttcaagcgtt gtgtcatcaa gattcagctt tttggcaaga atcaaagaat acatagtcac
     4741 cctcaaagag tggccgtgtg tgtatgggtc tttggcgtca agcgccgagg caatgagttt
     4801 tattgtttta taaaacagct ctcttaaatc tttgagaatc acggttttgt tgtttacaag
     4861 gtcaaatttt tgaatccctg tttcgattgt aagcttgagt tcttcggggt caaatggttt
     4921 tacaatgtac tggtacagat ggcaatcgtt gatagaatct acaattgcat ccacatcaag
     4981 gtgtcctgta agcaaaattt tgacgatatc agggtattca cctgcaacac gttttaaaaa
     5041 ctccgtgccc tccatctcgg gcattttctg gtcactgacg ataagcgcaa tctcactgcc
     5101 tttaccttcc actatttcca gtgcttcttt tccgtttgag gcagtcagga tattgtaatc
     5161 atgccggaga gttctgcgaa ggagctgaag gttattcacc tcgtcatcca cgagcagaat
     5221 ggtatgtttt tcgtttttag gattcacctg aagaatctcg ccaaggcttt cttcaaagga
     5281 atcttctttt aataatgcaa aattttccat acatacacca tattactcta tatacttcga
     5341 cagattccag tcaaaacttt atagattttt tcctaaactt tacaaaagtt taaaaaaaat
     5401 ttaatacaga caattatata atattttatt gagcttgtta atacatctaa ttgaggaata
     5461 aacattgcaa agcgcctttt ttcccgttat gatatataca ttcggttaac ctaaaacaat
     5521 aaggataaaa aatgtcatct gacagttata acttggaaac taaaaacaac gacgaaatta
     5581 gcacagaaga atcaatacag gaaaaagcag ataactcaaa attcatggct gtaatcaaag
     5641 ccctgattgc aaatctcggg attgcacttg ttaaattgat ttgtttcttt ttctcttcca
     5701 gttccgcaat gctggcagaa gccatccact cgggcgtaga ttcttttaac agtatctgcc
     5761 ttcttgtggg cataaaaaga ggctcccgcc ccgctgacaa cgcacacccg tttggctacg
     5821 ggctcgaggc taacgtctgg gcaatgtttg cttcaatact tatgctgggc ggtacttttg
     5881 tggctattta ccacggtttt gaaaaacttt tgcacgcaga agaaaccaat gaccttcttg
     5941 tacattacaa tgccattgca attgctttga tatgcagcat tatgtttgaa gcttgggctg
     6001 taataagcgc atccaaggct gttttacacg aagtaggaat cgaagaaaaa aaccctgtaa
     6061 aagagttttt ccgctcaata aaatacatag gcgaaattaa aagtcccaca acaaaatttg
     6121 tgtggtacga agatacagca gccctcaccg gtgtaattgt cgcatttgta gctcttacgc
     6181 tggcaaaatt tgtaatgcct tcgaaccttg catacgtgcc ggacgcaatc gcttctgtaa
     6241 tcattggtac aatcctgttt ttccttgcta tttacctgtt gaaaaacaat gtaaacagcc
     6301 tgacagtgca gtctgccgag cctgatgtag aagaaaaaat ccgtgaggtt gcttctacaa
     6361 ttcatggcat cacaggcgta atcgagctca agacaataga tttgggttca tcaggtttga
     6421 ttattaacat gacaatcgaa gttgatcccg aaacccagat gaaagacgca gatgatattg
     6481 ctgacatgct ggagcgcaaa atcaaaaaag ttatcaaaaa tataacccat atcacaatcg
     6541 agcttcaggc acacgatgcc gaagacaact gggaagaaaa attcacaaag ctcattaaag
     6601 aaggcgaaaa aataggaaca atcgacaacc acgaagcaac tatgctccaa aatttctttg
     6661 gatttgcaaa cactgttgtg cgagaaatca tggtgcccag aacagaaatc tttatggtta
     6721 atgtcgaaga aaatatcaat gagctcgctg atatgattat cagctcaggc cacacaagaa
     6781 tccctgttta cagagacaat gtggacaata tcattggtgt tataaatgca aaagacgttt
     6841 tgaaagtaat caaaaacaat cacgtggacg agcatttttc tatagagttt cttgccagag
     6901 agcttttgat tgtgccggaa aacaaattta tttccgacct tttgagcgat tttacttcct
     6961 caaaaaatca aattgcagct gttgtggatg aacatggcgg tattgcaggt attgtaacaa
     7021 ttgaggatat tttagaagaa atcgtaggcg aaatttatga cgagtttgac aaggtcgaaa
     7081 cgcccgaggt tgttaagata gatgagcaca cgctgaatgt ttcttgcaaa atggatattg
     7141 aagatatcaa cgaaagattt gacctcgaca tcccgaatga agacttccag acaatagggg
     7201 gttatgtttt cggactgtta ggcagagagc cggagctcaa tgatgttata gaagacaaaa
     7261 atattactta tacaattttg gaaatagacg gcagaagaat aagccgtatc aaaatgtgca
     7321 aagaaacgcc ttttgttgac gcaaccgaaa tcacagaaga acacgaagct caacaagacg
     7381 aacagcccgc acaggaataa ggaacaactt cgaacccgtt atctttgaac taacgaccaa
     7441 gagcctgatt gtacgcgtct acgtattttt gtgcgctttt atcccagcta aagtcagcat
     7501 tcatggcatt ttgtacaatc tgtgcccaat cgcgtttgtc tttgtagata ttgagtgcat
     7561 atcttatgca gtccatcata gcgtaagggc tgtaattcca gaacttgaag ccgtcgcctt
     7621 tgtccatggg ataaccgaca attgtatcat ccagcccgcc tgttgccctt acaatcggag
     7681 cagtaccgta ttttagcgaa ataagctggc tcaacccgca cggctcaaaa gctgatggca
     7741 taagaaacat gtcagctccg gcatacatca gattgccaag cggcgctgaa aactctattc
     7801 ttgcgcgaat attttcgctt gtagcgctga ggtaacggaa catgtcttcg taatgctgcg
     7861 cgcctgttcc cagtataata aactgcgcgt ccagtgtttt gagctcctcg caaacagggc
     7921 caaaaagatc aaaaccnnnn nnnnnnnnnn nnnngtttgt cttctacata aggaagtccg
     7981 aattctttta gtacagcttt tttgttgtct tctttgtact ggacatgttg tgcatcataa
     8041 ttttttgcaa tacatttatc cgttgcaggg ttgtaaacgc tgtaatccac tccgtttaaa
     8101 ataccgagca gtttatgcgc attgtggtta agtgtnnnnn nnnnnnnnnn nnnnnnnnnn
     8161 aacataattt ggcgaaacaa ccaccacttt gtcagcatag tttattgcac ctttcatcca
     8221 gttgagcatg ccaaaatgct caagccccca gcagttccac acatctttgt ggtcaagctg
     8281 cgcaaaatag agcaaatcat caaaccactg cccctgatag gcaatgttgt ggatggagaa
     8341 aaagtttttt gtatctttaa aaaacggatc gtttctgtaa tttatcttca tgtaagccgg
     8401 aatcnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnntcaat
     8461 agctgcatgc gaaaacgcaa taaatctttc atgctcgtat cttgtgtcta tgtttctcgg
     8521 gtaaacttca tgaaacggag caaaatattt gttgttgtcc aaaaagaaca cgttaacatt
     8581 ttttgtaccg ggcagtttag ccattttgag gttgaaataa tactggccat agctgtaatc
     8641 aatggtcaat ttagagtttt ccagctcttc gataccgtat ttgtgctggt caatgcagcc
     8701 gtgtaaaggg gtaaaaattg ccacctcgtg ccccattttt tcaagaactt tcggcaaact
     8761 gcccacaaca tcggcaagcc ctccgacttt ggaaaacggt gcaacttcgg ctgacacaaa
     8821 cattattttc ataaactgac cccttaatac tatattttat ataaaataat tatagcatta
     8881 aaaaaagacc cctgaaaatc agaggtcgaa taagtactgt ttattaaaca tgtctttacc
     8941 attggataaa gacaatacct gatgaaccgt cgccgccttc accctgctgg tctatccagc
     9001 ctgtgccgcc tccgccgccg gnnnnnnnnn nngcctattt ctacgccatt ggcaaacatt
     9061 tcacgcgtaa gtccgttata atttgtagaa ttgtctatgt aaccgttgtc atccaaagta
     9121 gtgaaaccgc cggcaccgcc ttcttgtttt gtgacagggt tgatatttgc aagctcaccg
     9181 ctttgtgctt tggccacttc acctgcttta gagtcgtagt aggtgcttga gctgtcgtag
     9241 tttatttcag aggcaccttt tccgcctcca accgtaggat agtttttaag gtatgagtac
     9301 tctccgtcat aaccgccgta atggccgatt acaccgccgg caccgccttt acccgggaag
     9361 caaagagtgt ttttgggcaa ttgtgcaaac ggaagctgga gcacctgacc tgcagtaccg
     9421 ccaaaacctg cgtaagaacg gttccagact atagatactg caccatatcc gccattgcct
     9481 tttggatctt tgtggttacg tccttcgtct gggcatctgt taggatatgc attgttacag
     9541 gcttttttgt tttttaaacc accaccggaa ccatatccgc cggaaccaat tgggtgttcc
     9601 aaatcttcac gatcccacag cttgaattct acgagtcttg catatgtaag agcactgttt
     9661 ctgtaagggc gtccccagtt gtcagaatct ttataagcta tacctgtagc tttcccgccc
     9721 gagctgttca ttctgtatgc acccggtttt tcgtattcga atatactgcc gtaagcagtg
     9781 ctgcttgctt cgtagtggag tttaaaatca ctgctggaaa atccgttgag gtttgtaaca
     9841 cctgcaccgc cggcatgagc accgcgaatg tacggatggc tttctttgtt gccttttttt
     9901 gttacaccat atctgggata aaacccgtta ccatctctta tacaactgtc agcatttctt
     9961 gaacgttcgc cgtatcttgt atcagtacat tgccaccagc gtgttttgtc tttaccgtca
    10021 tagtttgtgc aggcacctgc accaccgcct tgtgcaccga ttgtgaaaga acggtatgca
    10081 cttgtctggc tgtcgttgcc tgtgtatgta acccacgtat caccgccgtt acttgcgtgt
    10141 ccgtcattgt cttctcttgc ccagcctggg tctacaagcg agtaagagat tttgccgttt
    10201 ttatccagtt ttatatcatt tgttatgacc atgcctgccg gagagcctgt tgttgcaggg
    10261 ggctgacatc cgccactgcc ttgagaacag cttttatgcc ttacctgttc ggaacttgtg
    10321 tggccgcccg ctccgccgga acctattgca agaattttgt ataaaccgtc aacaggtact
    10381 gtaaaattac cgctttgtgt tccacctgaa attacaaaac tttcggcgcg tcctttgccg
    10441 gctgcaccgc ctccgccgcc gccaactact gtaactacaa agtttttggc attgttcggc
    10501 gggtcaaatt tgcagccggt acgcgatgtt ccatcagggc ctgtttctgt aacggtttgt
    10561 gcatctgaca ctttgccgtt gagattatat ttgccaacga tggtatttcc tttccaatag
    10621 caagcaaatg agtttctgtt aacgttctcc atctttttac gtttttttgt aatgacaggc
    10681 acggaagcca ttacaacaat acagattaca agaagcgtta tcagcgcttc tgccagagag
    10741 aaagctttat gttttttttg atttttcttt tttgtattaa tcatattctt cctttactaa
    10801 atagctgtct attaccactg gataaacaca acgccggaag agccgtcacc gcctctgccc
    10861 atattggcat ctataaagtt ttgcatttta cccaaaaatt tggcatcgtc tgaggtataa
    10921 gtcttgcctg tagctgtgcc cccgccaccg ccggagccgg cgcctataag gttgttgaag
    10981 gtatcaacct ctctgccgtt tgcaaaaagc ggccttgata aaccgtttat agtgctgtta
    11041 tttgtataac cgtttatgtt tttgtcagag taaccacctg ctccgccttt ttgtttgtag
    11101 gtaggagcaa tatttgcaat ctcaccgctt ccacctgcag ctccnnnnnn nnnnnnnnnn
    11161 nnnnnnnctg acacattgac aacaggggcc ggtcgtccgc catcagcttt tgcataattt
    11221 tttatataag atgattcgcc ctgtttcgca gcaacagctg tgggttcgta acggtcaccc
    11281 cacaatgaat ggcgtctttt aggttcaata taaccgcccg ctccgcctcg tccggggaag
    11341 agaagcgttt ttgcaggaag tgaagcaaaa ggtgtctgct taacttctcc cgcatagccg
    11401 cctttaccgg gataaagagg gctgccttta attatgacaa taccgttgcc gccttttgcc
    11461 tgaccaaaat cccagtaact gccgcttatc tgaccttcac cgccgccgcc ggcgccgttg
    11521 aagttgtaca attcgccgca accatacata gctgtacggc cattgcattc tccttgatta
    11581 tttgttctta catatctgtt aaaattaacg ccaaattcac tttcaaaact gtccagctgc
    11641 gaaataagct gcatgtcata atagtcattc tggtgataag aagattggtt tgtgccgacg
    11701 cttctgccgt tgtatattgt gccttttggc ttggaagcat tttgtgaatt aatagagccc
    11761 ttacccggtg agccgctgta tatagtgttt aagtactcaa caacttttga accaaggccg
    11821 ctaagtgctg ttccatcata atttttgcct attgatcggc ctccgcctga tgcgttgaaa
    11881 ccaatgattg ctctttcgga aacactacga ccagctttgt agctgcagcc accacctccg
    11941 ccgtcagcac gggcaatgag gccgtttttg ttgtatacat aagactcgga accactcatg
    12001 cctgactggt aatagtctgt agaagcaccg cctccgtcac cgactttgat tgtcaggctg
    12061 tcgtcttttg tgagatacac atcggaaaca taaaccatag ccgcttgagt acctgtacaa
    12121 gctcttctca ttacgcgtac attaccaatg ggcacaacat attggtcagc gcgtcctccg
    12181 ccgccgccac cgccaacaat aagcattttg taatttcctg aaaacggaac cttataggta
    12241 tttcccccaa cgctctcaaa aacctggttg gcttcctgtg cttcatcacc tgtggcagca
    12301 ccgcctccac cgccgccaac tgttgtaaca acaaagtttt ttgcacctgc cggaggtgta
    12361 aattcacagc catatctacc ttctgtgctg tcataatatg ttttgccgat ggcagttttt
    12421 tggtcgatga ggtatctgcc gattagctgg ccgttttgcc agtaacacgc gtaagcaccg
    12481 tgtgttacac ggtctatcga acgttttttc ttggtaatta tcggcagtga agccgcgata
    12541 attatcgtga taacaagcag tgcaacaagg gcctctgcca gcgtaaaacc tctgaaaacg
    12601 ctattaagag aattcttttt cataaatttt ccaaaacaat atcttatttc tatataatag
    12661 atattttatc ggaggttttc attaaaactt gacacttctc cagcgtcctt accttatctt
    12721 atcttacaga aaagcttatg gtgactggat tttggtgtca agaaactcag ctttacattt
    12781 cttaatattt gcgtttttaa gttaatattt attcatattt tgataatgaa gcctgttctc
    12841 ttgcctcttt gtttgattgt cttttttctt caattctttc gattctgcgg tttcttttgt
    12901 aaccgtatcc tgcgtaaata cctacgccaa ttgcaagcca cagcgggaac aacaatgctg
    12961 ttttacccat gcttgtgatt gcgacaacca tcagccctcc gcaaaggatt atacccattg
    13021 ccgggaacca gggcgagaac ggaaccttga aaggtctgtg tctttcaggg tctgtttttc
    13081 tcaatatcaa aacacctaca cacacgatga tgaaagatgt gaatacgctg aatatgcaaa
    13141 gctgtgcagc aaggttcaaa tcgaggaaca tgcagccgat aaccattgca ataccaacaa
    13201 cccacgtgat tacgtgcgga gttttataaa cagggtgtac tttcttcaaa atagaaggga
    13261 agaagttgtc tcttgccata gagaacaaaa ttcttgttgc agcaagctgc ataacgagca
    13321 atacagatgt caaacctgtc aacgcaccta cggatatcaa accggcaacc cagccctgac
    13381 ctgtcatttg cattgcatgg gcaataggag cgtggatatt gattgcatcc catctgacca
    13441 cacctgttaa aacaagtgca acaaatatgt atacgatagt acaaagaaca agtgtaccga
    13501 taataccaat tggaatatct ttttgagggt ttttggtttc ttctgctgct gtagaaatag
    13561 catcaaaacc tgtgtaagca aagaagattg taaacgcgct tatcaacaca ctgccaatgc
    13621 cgtttggcat aaacggtgtc cagttgtcag gttttacata aaacgcacca acgccgatga
    13681 aaaggccgat aacaacgagt tttatgataa ccatgatacc tgccatgttt ttggattcgg
    13741 aaataccttt tacaagaatg cttgtaacaa gcaatatcat taaaattgcg ggtatattca
    13801 cagaaaaagg aataaacccg agcaagtgcg gtatgtggtc agcagggtta agacccattt
    13861 ttaaataagc ttccttagct gtagcatagt cgttaacaag ccacaaaggc ggatacatga
    13921 tatggtgtgc aattccctgc aaagcagcgg gcagatgagc tgtgtatggc tcaaaccctc
    13981 ttaagaattg caataaataa cctgtccagc tgcaagcaac agcaatatta ccgatagtgt
    14041 actggagcat aagcacccag cctaccatcc acgcagccag ctcgcccatt gtagcgaagg
    14101 tatatgtata aacaccgccc gaaacgggaa tcatagaggc aaactcggca taacacaagg
    14161 ccgaaaatat acacgcaata gcagcaatta tcatagaaat aatcaatgca gggcctgcac
    14221 cggggtgacc tggtgtgcca acaacggcag aaccaaccat agagaatatt ccggcaccaa
    14281 taactgcacc aataccaagt ataattaagt caacccaatt caaagttttt ttcaaaccag
    14341 tctcttttga ctgtgctaac atatcatcgg gattttttgt ttttaacaaa ttagaaacaa
    14401 aattctctac caatccggct tctgttacgt cgttttgact catgtaaata tccttatatt
    14461 aaattgtcac tttttgcgtt ttgtttttaa gtaaggggaa acctaactct tctctttgtt
    14521 caacatacag ttttgcaacc atggctgcca ttcttctgac tctgttaata aagtttattc
    14581 tctcatcttt cgaaataacg cctcttgcgt ctaagaggtt aaatgtatgt gaacatttta
    14641 aaacgtagtc gtaagcaggc agaaccagct tattttccac gcagttttca acttcttcct
    14701 gatacaaatc aaacattttg aacaatttat ccgcagaaga cacctcaaaa ttgtactttg
    14761 actgttcaat ttcgttttgc agataaattt cgccatactt caattctttg ttccacataa
    14821 catcgtaaac agagtttaca ttttgaagat acatagcgat tctttcaagc ccgtaagtca
    14881 gctcaagcgc aaccggcttg atttccaaac cgcccacctg ttgaaaatac gtaaactggg
    14941 tgatttccat tccatccagc catacttccc aacccacacc ggctgcaccg agggtgggag
    15001 attcccagtt gtcttcaaca aatctgacat cgtgctgcga caggtcaatg cccattgctt
    15061 ccaaactttt tagataaagc tcctgcgcat tatcaggaga cggctttaaa ataacctgat
    15121 actgaaaata atgacccagc ctgttaggat tttcgccata acgtgcgtct gtcgggcggc
    15181 ggcatggttc taccattgcg gtattccagg gttccggccc aagtgaacgc aagaatgttg
    15241 cgggattcat tgtagaagcg cctttttcta tgtcataagg ctgctgaatt atacatccgt
    15301 aatcggacca aaattttgat aagtttaaaa ttaattcttg aaaggttaaa gccattcttt
    15361 cattgattcc agtaagtctc taatctaatg cacaaagcgt tttcgcttta agctctaaca
    15421 ttataatata atagtccgta ttttacaaac gattgtaatg attacactta aaattgttac
    15481 atgtgtaatt gcaaagcagg acaaaaaacg ctgatttttt aaaaatcgga gagttttttg
    15541 tcaaaattgt ttaatttttt gtcaaaaaaa ttatataacc gcagaagggc aataatttct
    15601 tgtatatttt tttctttttt ttactttgtt tacaattctg tcgagttttt gaaaatccga
    15661 gca
//
LOCUS       DABS01000004            5606 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_7993, whole genome shotgun sequence.
ACCESSION   DABS01000004 DABS01000000
VERSION     DABS01000004.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5606)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5606)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5606
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(24..2078)
                     /locus_tag="CPT85_00155"
     CDS             complement(24..2078)
                     /locus_tag="CPT85_00155"
                     /inference="COORDINATES: protein motif:HMM:PF02806.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27225.1"
                     /translation="MILNTGINYTPSLKQNFKASLLAQMMKNSNVQQNTAPEAAPVSQ
                     NQGLPLSNPAHIPVTTPVADKYVQTMAKNSLLTALMAKTAASQNIQQQPVAQTAAVTP
                     VKTPRLEGYQNNLRSMFQNNQAVIFAMVPRTFNAKDTDGNGLIEGNEEPGYFTNMVER
                     LDELKSYGINTLHWLPINPPGKIAAKGNAGSVYAPLDYLSIDPNLDDPKDPRDVYEEA
                     KYAINECHKRGIKVMVDLPSCMSVDLYNARPDLRATDAEGKPKTPEGWEDIRMFDPWK
                     DPDKGELNQALVDYHKKFIDMCIELGIDGIRADVGRAKPPQFWDIITSYARSKDPEFG
                     FLAECYTYEDASPMKNMPADRPEEALDSGFDTYYGQYHIFHMWKASDFNKFVEESLKI
                     SHNHPKGKALIGSFATHDDKSPMANGGPDYCMMTNVLQATLPMTNPYIISGFESGDRY
                     IYPYGKKFVNNTFNQLLENPVYKDTVNSLLNNSGYEDREKLRKLVSCSDADKKVEELA
                     EDPEYKSIIDFLDHFSLTKDNIRHYVHSEFLDIFNKSRRPGGENPEIGHQFGYLMNTV
                     RPKYGEVITKGSYIPLKVDNDSRDEVIAYARCKDGKTLVTIANHDVNARQKVKVRVPG
                     MSSAQVLEDLSPRYGTGSTWEAKDNAIEIDLGPAQAHIFEIDDPELPNLVKPEMVWQQ
                     NL"
     gene            complement(2078..4573)
                     /locus_tag="CPT85_00160"
     CDS             complement(2078..4573)
                     /locus_tag="CPT85_00160"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27226.1"
                     /translation="MKTGVNINQRYIDSAQKRKMVYEDNQYRPMDLFRHVDLNGRPLK
                     PEEYYKKYDHDFVYLEKMGDKLGIPRDIKNRNEATLNKMYQVGTQGRTLLMLTAGVVT
                     PVVSSIVADSLQKPLKTFLEKQRYDKAVNELHTLDTNVESLIKSNTTNIDKVMEKLGI
                     TIDSDMDSKLKQVVKDDKHYSTQEFDKLSRFLSDEFNGTGFNEAIKDALKANATMGEP
                     HIGVTENLKGELTVLSKNIVQDFLKDIPAEKKSALPQELLNFNGISREKVAEVITNTL
                     GDVRSELNTQGITALKNNFIVAVRQELNSINFANPKVKASFLRNMDNVLDAKTDAFVQ
                     TKRRYIIPKSEILKIIKIAQTNKKLSAKLEAFQRTSIKNISESMTANNWGNVPPKYLK
                     AIGFTKGELAVIATQDSAAASAVIAKRLEQVVAEPQKYEKVLEELTKLASSAVTKEEK
                     AVLEMLGTTNKPGTLFKVKELMMKISQKELNSSMNAVLARHYNARIADVRRKYRNTID
                     SFAKPIKTLEVYKHIKNSVKDILAPNEDAYYKMIGEDINSRKNQFYPFHNMSYKDAVE
                     TVEKYLKNALVEKNDIAVWTTKFEHALPGHARGMKDSLELVRRMSIAMFGDLIPDTVS
                     KMKNPEFAAKVNVNNSVMRARYIRLENELSEAFSFESKNYDHKFRGYKYSSKWNYMTD
                     YNFFGGIVDDFVNGNTSQYNKLCALLEERLTDLSEEEFKNCRTVLNDIKNNKHRQPGY
                     DLASARNLLFQKLDFKSSNKSLCEMAGKDITDMFMQGAQDIRARNQWTKLVYGLLIGA
                     GAVSALTIALIGKKNHFNKAIYEPLDVQQGAGN"
     gene            complement(4570..5073)
                     /locus_tag="CPT85_00165"
     CDS             complement(4570..5073)
                     /locus_tag="CPT85_00165"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27227.1"
                     /translation="MGNLIQSIPVYKPVQQPVQVQKNPVTNAVNPAPFDKGPFADAPK
                     YTYQPARPLSPGTTAPKGARPLAASGTLVKENIFQSAGSTVSSYVNYFKYFYNAAFKG
                     EGNDYKVGKINDLAIRAGSLGIAGVLATSKMFPFAKGMEFVGLGTWFAAMALXHCGPE
                     FLVFLSK"
     assembly_gap    4609..4610
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5074..>5606)
                     /locus_tag="CPT85_00170"
     CDS             complement(5074..>5606)
                     /locus_tag="CPT85_00170"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27228.1"
                     /translation="LLYKKDGNTPEQINEEYARLGKKFGVKGDVNDVDQSVKPLLKKT
                     IIMARAWQYALTAFFVTLGIGMANQPAWTAESAQGFKKTVTNGILGKNVPISDRIKNA
                     KIAVYDYGIRPIGRSFLEFWKGNGTKASSVAGKSVIIATGLATLTAISLLIGKTSARG
                     HKVESSGANKINEGVQ"
BASE COUNT         1443 a         1103 c         1107 g         1951 t
ORIGIN      
        1 aattaaacta ttaaagcaaa ccattaaagg ttttgctgcc ataccatctc gggcttgaca
       61 aggtttggca attcagggtc atcaatttca aaaatatgag cctgtgcagg accgaggtca
      121 atttctattg cattgtcttt tgcctcccag gtactgcctg ttccgtatct tggagaaagg
      181 tcttcaagca cctgtgcaga actcatgccc ggcactctta ctttgacttt ttgtcttgcg
      241 ttaacgtcgt ggttagctat tgttacaaga gttttaccgt ctttgcatct tgcatatgca
      301 attacttcgt ctctgctgtc gttatcaacc ttgagcggaa tataactgcc ttttgttata
      361 acttcaccgt attttggacg tacggtattc atcaaatatc caaattgatg accgatttca
      421 ggattttcgc cgcccggtct tcttgatttg ttgaagatat caagaaactc agaatgcacg
      481 taatgtctta tgttgtcttt tgtcaaagag aaatggtcaa gaaaatcgat tatgcttttg
      541 tattcaggat cttcagccag ctcttcgact tttttatcag catcactgca ggaaacaagc
      601 ttacgcaatt tttctctgtc ttcgtagccg gagttgttga gcaaactgtt tactgtatct
      661 ttgtagacag gattttctaa aagctgattg aatgtattgt taacaaactt tttgccgtaa
      721 ggataaatat atctgtcgcc tgattcaaaa cctgaaataa tgtagggatt tgtcataggc
      781 aatgtagctt gcaaaacatt tgtcatcatg cagtaatcag ggccgccgtt tgccatgggg
      841 ctcttgtcat cgtgtgttgc aaaagaacct attaaagcct tgccttttgg atgattgtgc
      901 gaaattttta aactttcttc aacaaattta ttaaaatctg atgccttcca catgtggaaa
      961 atatgatact ggccgtaata agtatcaaat cccgaatcaa gagcttcttc aggtctgtct
     1021 gcaggcatat ttttcatagg agaagcgtct tcatatgtat agcattcggc aaggaaacca
     1081 aactcaggat ctttgcttct tgcataagaa gtgataatat cccagaattg aggcggttta
     1141 gctctgccta catcggctct gatgccatca ataccaagct caatgcacat atcaataaat
     1201 tttttgtgat aatcaaccag cgcctgattc aactctcctt tgtcagggtc tttccagggg
     1261 tcaaacattc tgatatcttc ccagccttcc ggtgttttgg gtttaccttc ggcatcagtg
     1321 gccctgaggt cgggccttgc attgtaaagg tcaacagaca tacagcttgg caggtctacc
     1381 attactttta tgcctctttt gtggcattca ttaattgcat attttgcttc ttcatagacg
     1441 tctctcgggt ctttaggatc atcaagatta gggtctatag aaagataatc taaaggagca
     1501 tatacagaac ccgcattgcc cttggctgct attttgccgg gagggttaat gggcagccag
     1561 tgaagagtat ttattccgta agacttgagc tcgtcaagac gctctaccat atttgtaaaa
     1621 taaccgggct cttcattgcc ttcaataagt ccgttgccgt cagtatcttt tgcgttaaat
     1681 gttcttggaa ccattgcaaa aattactgcc tgattgtttt gaaacattga acgaagatta
     1741 ttttgataac cctcaagacg tggagtttta acaggtgtta ccgcagctgt ttgagcaaca
     1801 ggctgttgtt gtatattttg tgatgctgct gtttttgcca tcaaagcagt gagcagactg
     1861 ttttttgcca ttgtttgtac atatttgtct gcaacaggtg ttgttacagg tatgtgagcc
     1921 ggattggata acggtaaacc ttgattttgt gaaacaggag ctgcttccgg tgcagtgttt
     1981 tgctgcacat tgctattttt catcatctgt gcaagaagcg atgctttgaa attttgtttc
     2041 agcgaaggtg tataattgat tcctgtattt aatatcatta gttacctgcc ccttgttgta
     2101 cgtccagcgg ttcgtatata gctttgttaa agtggttttt cttgccgatt agtgcaattg
     2161 tcaatgcgga aacagcgccg gcacctatta acagaccgta taccagtttt gtccattggt
     2221 ttctggctct tatgtcctgt gccccttgca taaacatgtc tgtgatgtct ttacctgcca
     2281 tttcgcacaa tgatttgtta gaagatttga aatccagttt ttggaataac agattccttg
     2341 cagaagccag atcatatccg ggttggcggt gtttgttatt cttaatgtcg tttaaaacag
     2401 ttctacagtt tttaaattct tcttctgaca aatcagtgag tctttcttct aacagagcgc
     2461 acagcttgtt gtactgtgat gtattaccgt ttacaaaatc atccactatg ccgccgaaga
     2521 aattgtaatc tgtcatatag ttccattttg agctgtattt gtaacctctg aatttatgat
     2581 catagttttt actttcaaaa ctaaatgctt cagagagttc gttttcaagt ctgatatatc
     2641 ttgctctcat aacagagttg ttaacgttca ctttagccgc aaattcagga tttttcattt
     2701 ttgatacagt atcaggaatc aaatctccaa acattgcaat agacattctt cttacaagct
     2761 caagagagtc tttcatgcct cttgcatggc cgggcagtgc gtgttcaaat tttgtagtcc
     2821 aaactgcaat gtcatttttt tcaacaagag catttttaag atacttttca acagtttcca
     2881 ctgcatcttt ataagacata ttgtggaaag gatagaattg gtttttgcga gagtttatat
     2941 cttctcctat cattttatag taagcatctt cgtttggagc gaggatatct tttacagaat
     3001 ttttgatatg tttataaacc tccagcgttt taatcggttt tgcaaaggaa tctatagtgt
     3061 ttctgtattt tcttcttaca tctgcgattc ttgcattgta atgtcttgca agtactgcat
     3121 tcatagagct gtttaattct ttttgagaga ttttcatcat cagctctttt actttaaaga
     3181 gcgtacccgg cttgtttgtt gtaccgagca tttccaaaac ggctttttct tcttttgtaa
     3241 cagcagagct ggccagtttt gtaagctctt caagcacttt ttcatatttt tggggttctg
     3301 caactacctg ctccagcctt tttgcaatta ctgcactggc cgcagcagaa tcttgtgtgg
     3361 caataactgc cagctcacct tttgtaaagc ctattgcttt gaggtatttt ggcggaacat
     3421 tgccccagtt gtttgcggtc attgattcag agatattttt aatagatgtt ctttgaaatg
     3481 cctcaagttt tgcagagagc tttttatttg tttgtgcaat tttgataatt tttaatattt
     3541 cagattttgg aataatgtag cgtctttttg tttgaacaaa cgcatctgtc tttgcatcaa
     3601 ggacgttgtc catatttctt aagaaagatg cttttacttt ggggttggca aaattgatac
     3661 tgttgagctc ttgtcttaca gcaacaataa agttgttttt aagagctgta ataccctgtg
     3721 tattaagctc agagcgcaca tcgcccagag tatttgtgat tacttctgca actttttccc
     3781 ttgatattcc gttgaaattt aacaattcct gcggaagtgc agatttcttt tcggccggaa
     3841 tatcttttaa gaaatcttga acaatatttt tagacagaac tgtcaactca cctttaaggt
     3901 tttctgtgac gccaatgtga ggttcaccca ttgtggcatt tgctttaaga gcatctttta
     3961 tcgcttcatt aaaacctgta ccgttgaatt catctgaaag gaaacgggaa agtttgtcaa
     4021 actcttgagt agaataatgt ttgtcatctt taacaacctg tttgagcttg ctatccatat
     4081 cagaatcgat tgtgatacca agcttttcca tcactttgtc aatatttgtt gtgtttgatt
     4141 tgataagact ttctacattt gtatcaaggg tatggagctc gttaactgct ttgtcatatc
     4201 tttgtttttc aaggaaagtt ttaagcggtt tttgcaaaga gtcagcaaca attgaagaga
     4261 caacaggagt aacaacgccc gcagtaagca tcaaaagtgt tctgccctgt gtgcctacct
     4321 gatacatttt gttcagggta gcttcgtttc tgtttttgat atctcttgga ataccaagct
     4381 tgtcacccat tttttcaagg taaacaaaat catggtcata ttttttgtag tattcttcag
     4441 gctttaacgg tctgccgttt aaatcaacat gcctgaaaag atccatgggt cgatactggt
     4501 tgtcttcgta aaccatttta cgtttttgag cagaatcgat ataacgctgg ttaatattaa
     4561 ctcctgtttt catttggata ggaacaccaa gaactctggg ccacaatgnn acaatgccat
     4621 agcagcaaac caggtgccga gccctacaaa ttccatgcct tttgcaaacg gaaacatttt
     4681 tgacgtagca agcacaccgg caatgcccaa agaacctgct cttattgcaa ggtcattgat
     4741 tttaccgact ttgtagtcat taccttcgcc tttaaaagca gcgttataaa aatatttgaa
     4801 ataattaaca tatgaagata ctgtgctgcc ggctgattgg aaaatatttt ctttaaccag
     4861 tgtaccggaa gcagcaagcg gtcttgcacc tttaggagct gttgtaccgg ggctcaaggg
     4921 tctagccggc tggtaagtgt attttggagc atctgcaaac ggacctttgt caaaaggcgc
     4981 aggatttaca gcatttgtta caggattttt ttgaacctgt acaggctgtt gaacaggctt
     5041 ataaacaggt atgctttgaa tcaaattgcc catctattgt acgccctcat taatcttatt
     5101 tgctccggaa gattctactt tatggcctct tgcagaagtt ttgccaatca aaagtgaaat
     5161 cgctgtcaaa gtagcaaggc ctgttgcaat aataaccgat ttgcccgcaa cagatgaagc
     5221 ttttgtgccg ttgcctttcc aaaattctag gaaactgcgg cctattggtc ttataccata
     5281 gtcataaaca gctattttgg catttttgat acggtcagat atcgggacat tcttgcccaa
     5341 aataccgttt gttactgttt tcttaaatcc ctgtgcggat tcagcagtcc atgccggctg
     5401 gttggccata ccaataccga gtgttacaaa aaaggctgtt agagcatatt gccatgctct
     5461 tgccattata attgtctttt taagaagcgg ttttacagat tggtcaacat cgttaacatc
     5521 acctttgacc ccgaattttt tacccagtct tgcatattct tcgttgattt gctcgggtgt
     5581 gttgccgtct tttttgtaaa gaaggt
//
LOCUS       DABS01000005            4501 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_17191, whole genome shotgun sequence.
ACCESSION   DABS01000005 DABS01000000
VERSION     DABS01000005.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4501)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4501)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4501
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            161..751
                     /locus_tag="CPT85_00175"
     CDS             161..751
                     /locus_tag="CPT85_00175"
                     /inference="COORDINATES: protein motif:HMM:PRK00081.3-2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="DAB27220.1"
                     /translation="MLKVGLTGNIASGKSIVQSYIEKKGIPVIDADWICHRLMDENEE
                     VIEKVKKLFEGKDIFLDDGRLGRHKIGLIVFADPEKMEALEDILHPLVEEKIKQFFEE
                     NEDEEIVVASVPLLFEENMQNLFDRTVLVCADKKVRLQRLMNRNGYPLEHALERINAQ
                     VSQEEKRNMADFIIENNNNLIELETQIEKTLERLWL"
     gene            748..1191
                     /locus_tag="CPT85_00180"
     CDS             748..1191
                     /locus_tag="CPT85_00180"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27221.1"
                     /translation="MITKLHKIPDRTIFRIIFAFLILWNIKYFFLIFQIPYTMLFVDY
                     IKQNSFYTQVFDIRQALGSVEDLKNETQIGFVSDTPEASVFDIQDSIRDFYLAQYAIA
                     PAVLKNDTDKNYVIGTYQRTPSVPEGFKTVKTINAKTYLYKRINK"
     gene            1188..1565
                     /locus_tag="CPT85_00185"
                     /pseudo
     CDS             1188..1565
                     /locus_tag="CPT85_00185"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1532..1548
                     /estimated_length=17
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1577..2503
                     /locus_tag="CPT85_00190"
     CDS             1577..2503
                     /locus_tag="CPT85_00190"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27222.1"
                     /translation="MSTNLPLWQNMFSLPHFMSHNDYPLMLPSLTAGLWNYAGGENYA
                     VNITIALFFTFGLVYLLFQALEYFKSAKIAVVVTSVFMILDIFLVNGAAQCADIPLAY
                     MFLSSIVCLFLYFRKEKFSYILLSEIFAALGAWTKNEGMMFFLIWLAVILGWMLYKKM
                     YKKAGLTLLTAVVSVCFIAWFKYLAHTPNDLVAGFFILKTYHFAFDWSRYAIILKTFV
                     SMAFTRFLLVFALALLXXXRIKQINKTPFMLSCAILLLCTAGYFGVYLFSPHDITWLV
                     QNSMDRIILQILPVFLFLFAVNLRIGKPDSRN"
     assembly_gap    2279..2286
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2570..3109
                     /locus_tag="CPT85_00195"
     CDS             2570..3109
                     /locus_tag="CPT85_00195"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27223.1"
                     /translation="MKNKIVTSLIAALVLAGGLFAFAATAPKSVDLNLAAAQKAETKA
                     VQNTAPPANAGEYICVKPLDVVANPDMYLNKKIKFTAAFDKFSTLGLDYKPALRDSQK
                     YISFLIKRDDVTDHTIPLSEMKIFIKRADAEKFIDLDSGDIIEVYGKVFSNALTDPWI
                     DTEKLIVVDKKNKDTKKKA"
     gene            3180..>4501
                     /locus_tag="CPT85_00200"
     CDS             3180..>4501
                     /locus_tag="CPT85_00200"
                     /inference="COORDINATES: protein motif:HMM:PF03065.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase"
                     /protein_id="DAB27224.1"
                     /translation="MSTNKSNDKANAAEIKDKDKKYLTIHGHFYQPPRENPWLEAIEL
                     QDSALPFHDWNERVNLECYNPNSASRIVDNKNKVLDIVNNYSLMSYNFGPTLLSWMEK
                     HAPKTYERIIKADVVSRVKFSGHGNAIAQVYNHIIMPLANRRDKETQVKWGIRDFEYR
                     FGRMPEGMWLAETAVDDETLEVLADNGIKFTILSPYQSLKYRKMGAKDWTDAGWGNID
                     PAKPYRYFIKNNPKKFVDLFFYDGAISKSVAFDNILQDGNKFVNRLKEGISNDRNYPQ
                     LINIGTDGESYGHHTKFGDMALAYVLRVKAEEAGFTITNYGEYLEKYGVHDEVDIKQA
                     SSWSCFHGVGRWKEDCGCSTGGQPSWNQRWREPLRNALDYLRDNLIALYEKQGKKFFT
                     KDPWEVRNEYINVILDRTELAIKNFCKNNLKPECNDQDKVAAMKLLEM"
BASE COUNT         1495 a          891 c          888 g         1202 t
ORIGIN      
        1 aaaataatac aggtcagaaa cgaagcccgt gcgcaaaaaa actgggccgt ggctgacaac
       61 ataagaaatt cgctcgataa aatcaatatt gttttaaaag attcaaaaga gggaactgta
      121 tttgaattaa aatagttaac ttacagaaag ttggcagagt atgttaaaag taggtctcac
      181 aggcaatatt gcctccggta aatcaattgt acaaagctac atcgaaaaaa aaggcatccc
      241 cgtaatcgac gctgattgga tttgccaccg tcttatggac gaaaacgaag aagtaatcga
      301 aaaagtaaaa aaactttttg aaggaaaaga cattttcctc gatgacggca gactgggccg
      361 tcacaaaatc ggactcattg tttttgcaga ccccgaaaaa atggaagctc tggaagacat
      421 tcttcacccg cttgtggaag aaaaaataaa acaatttttt gaagaaaacg aagacgaaga
      481 aattgtcgtt gcttcggtgc cgcttttgtt tgaagaaaac atgcaaaacc tttttgacag
      541 aacagtgctt gtttgtgcgg acaaaaaagt gcggctgcaa aggctgatga acagaaacgg
      601 ctacccctta gagcacgctt tagagcgtat caacgcgcaa gtttcacagg aagaaaaaag
      661 aaacatggcc gatttcatca tagaaaacaa caacaacctt attgaactcg aaactcaaat
      721 agaaaaaacc ctcgaaaggc tctggttatg attacaaaac tccataaaat ccctgacaga
      781 accatttttc gcataatttt tgcattttta attttatgga acattaaata tttctttttg
      841 atttttcaaa taccctacac catgcttttt gttgattaca taaagcaaaa ctctttctac
      901 acacaggttt ttgacataag acaggcctta ggctctgtgg aagatttgaa aaacgaaacc
      961 cagataggct ttgtctctga cacgcccgaa gcaagcgtct ttgacataca agactccata
     1021 cgcgactttt atcttgcgca gtatgcgatt gcacccgcgg ttttgaaaaa tgatacagac
     1081 aaaaactacg taatcggcac atatcaaaga acaccgtctg tgccagaagg ctttaaaaca
     1141 gtaaaaacaa tcaacgcaaa aacatatttg tataaaagga taaataaatg atactcgggt
     1201 ttgtatacgg atttttagtt acacttttca cgggctactt tgcggtctcc tgcatagaaa
     1261 gagaaatgga gcttcgcttc aggcttttgt tttccatacc tctggggttt ggcataagct
     1321 cgattctcta ttttttgtgc ctgtatttta atgtaaacag ctttaaaact acagctatca
     1381 tacagacaat cttgatggtt gtgctggctc ttatgtatta caacgaagaa aagccggata
     1441 tgagcaaaca caaattcaaa aagctctcga gctggtttta tcttttgaat ctttatgctg
     1501 tgttgatttt tctaaaatat tttataaaca annnnnnnnn nnnnnnnnca gaatctggaa
     1561 cataaaggcc ctgtttttga gcacaaatct accgttgtgg cagaatatgt tttctcttcc
     1621 gcattttatg tcgcacaacg attatccgct tatgctgccg tcgttgacag caggactgtg
     1681 gaattatgcc ggaggagaaa attacgcagt aaatattact atagccctgt ttttcacatt
     1741 cgggcttgtg tatcttctgt ttcaggcgct cgagtatttt aaaagcgcaa aaattgccgt
     1801 ggttgtcact tccgtgttta tgatactgga tatttttctt gtaaatggag ctgcgcaatg
     1861 cgctgacatt ccgcttgctt atatgttttt gtccagtatt gtatgtttgt ttttgtattt
     1921 cagaaaagaa aaattttcat acatcctcct ctctgaaatt tttgcagcac ttggcgcgtg
     1981 gacaaaaaat gagggtatga tgttcttttt aatctggctt gcggttattt taggctggat
     2041 gttgtacaaa aaaatgtata aaaaagccgg actcacactg ctcacagccg ttgtgtccgt
     2101 atgttttatt gcatggttta aataccttgc acacacgcca aacgaccttg tggcagggtt
     2161 ctttatcctc aaaacatacc actttgcttt tgactggagc agatatgcta tcattttaaa
     2221 aacctttgtg tctatggctt ttacaaggtt tttgcttgtg tttgcacttg ctttgcttnn
     2281 nnnnnncaga ataaaacaga taaacaaaac cccctttatg ctctcgtgtg caatcctttt
     2341 gctttgcaca gcaggatatt tcggggttta cttattttca ccgcacgata tcacgtggct
     2401 tgtgcaaaac tccatggaca gaatcattct tcaaatttta cccgtgtttt tattcctctt
     2461 tgcggttaat ttgagaatag gtaaaccgga cagccgtaat tagattacta tttagaataa
     2521 atatgttaaa attaaaaagt taaaatcaca gaaaaataag gtaaaaatca tgaaaaataa
     2581 aatagtcact tcattaatag cagcgctggt actggcaggc ggattgtttg cgtttgcggc
     2641 aacagcacca aaatctgtag acctcaacct tgcagcagca caaaaagcag aaacaaaagc
     2701 agttcaaaac acagcacctc cggcaaatgc aggtgagtat atctgtgtaa aaccgctcga
     2761 tgttgtggca aatcccgata tgtatttgaa taaaaaaatc aagttcacag cagcttttga
     2821 caagttctcc acactcgggc tggattacaa acctgctttg agagattcac aaaaatacat
     2881 ttctttctta atcaaaagag acgatgtgac agaccataca atcccgttat cggagatgaa
     2941 aatttttatc aaacgcgctg acgcagaaaa atttattgac cttgattcgg gcgacataat
     3001 cgaagtttac ggaaaagtct tttcaaacgc tttgacagac ccgtggattg atacagaaaa
     3061 actcatcgtt gtagataaga aaaacaaaga tacaaagaaa aaagcataaa tttgaaatta
     3121 actgatacat gtctgtataa tgttattcac acaaagaaga agttgcggag ttattaaaaa
     3181 tgagtacaaa taaatctaac gataaagcaa atgctgctga aatcaaagac aaagataaaa
     3241 aatacctgac catccacggg catttttatc aaccgccaag agaaaacccg tggcttgagg
     3301 caatcgagct gcaagacagc gcactgccat tccatgattg gaacgagagg gtaaatctcg
     3361 aatgctacaa cccgaattcc gcctcaagga ttgtggacaa caaaaacaaa gttttagaca
     3421 ttgtaaacaa ctactctttg atgagctaca acttcgggcc cacgcttttg tcgtggatgg
     3481 aaaaacacgc tccaaagact tacgaaagaa tcataaaagc agatgttgta agccgtgtaa
     3541 aattttcagg acacggaaac gccattgcac aggtatacaa ccacataatc atgccccttg
     3601 caaaccgccg tgacaaagaa actcaggtaa aatggggcat aagagatttt gaatacagat
     3661 ttggcagaat gccggaaggc atgtggctgg ccgaaaccgc tgttgatgat gagacactcg
     3721 aagtactcgc tgacaacgga atcaaattta ccattctgtc accgtatcag tctttgaaat
     3781 acagaaaaat gggtgcaaaa gactggactg acgcaggttg gggaaacatt gaccctgcaa
     3841 agccttacag atactttatc aaaaacaatc ctaaaaagtt tgtcgacctg ttcttctatg
     3901 acggcgcaat ctcaaaatcc gttgcgtttg acaacatact gcaagacggt aacaagtttg
     3961 ttaaccgctt aaaagaaggt atctcaaacg acagaaacta cccgcagctg ataaacatcg
     4021 gtacagacgg cgaaagctac ggacaccata caaaattcgg cgatatggcg cttgcttacg
     4081 tgctgcgcgt aaaagcagaa gaggccggat ttaccataac aaactacgga gaatatctcg
     4141 aaaaatacgg tgttcacgac gaagtagaca tcaaacaagc atcttcatgg agctgttttc
     4201 acggcgtggg cagatggaaa gaagattgcg gctgctctac aggcggccag ccaagctgga
     4261 accagagatg gagagaaccg ttaagaaacg cactcgatta cctgagagac aacctcattg
     4321 cactttacga aaaacagggc aaaaaattct ttacaaaaga cccgtgggaa gtgcgaaacg
     4381 aatacattaa cgtcatttta gacagaacag agctcgccat caaaaacttc tgcaaaaaca
     4441 acctcaaacc tgaatgcaac gatcaggata aagttgctgc gatgaagctt cttgaaatgc
     4501 a
//
LOCUS       DABS01000006            4997 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_11173, whole genome shotgun sequence.
ACCESSION   DABS01000006 DABS01000000
VERSION     DABS01000006.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4997)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4997)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4997
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..361)
                     /locus_tag="CPT85_00205"
     CDS             complement(<1..361)
                     /locus_tag="CPT85_00205"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27217.1"
                     /translation="MKKPVSALFVLLMLFYNAFIPALCKTKSEQNDYIKIEQTTRHLH
                     SRLSKKYTGYDYTINNIYKTPVTIQSVSVWDNANNKVAYLSVKRTGMRAATETMGVGI
                     ALALPTLCLSVVGAAVAV"
     gene            complement(387..3878)
                     /locus_tag="CPT85_00210"
     CDS             complement(387..3878)
                     /locus_tag="CPT85_00210"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27218.1"
                     /translation="MNCPKCNTVIGEKDLVCPNCKKVLRLQCPACGAITKNTVCEKCG
                     SVIINKCYKCGKLNSAALEKCPKCGLNVNASIGLRESVIEEFAVLTIEITNFDDIKNA
                     FKSDKIVEQFKKNLYTLIRKTAAQKKLRVQFLQDTFIIRFCKDYTFLESCKSALDFSI
                     YVAQTVTEINKKLFDAKGVELKVQMAVQKRDVYSKPSEYKAGLNINVVYSSSGRSHLF
                     NNTEVVVDSYIYQETKLEYPFQSLSAVYVKNQMVMFFELMLHQIIKPEQNKDDDFDIN
                     NVKLPKNVDYEPEEEEEEKHLINFSSLNCTFVKTRGENLLSEIQKIKSKDVTNPIISV
                     RSSLRNSSLSLVDTENIKTVFEDYNVVRFSCPAQNKYSPYGLFKQMILSYRGYGELNV
                     LLNSDLIEVLSQDSNIIDLFKMDISAKVHPEDLRYTYFESFTNFISALPDKTIFVIDD
                     FDNVDEGSLEIIKYLCENRGFRNVGFIVSCNEQYSLHRKIYKLMTSPNYFEIEIRPSS
                     NKNIVAENIKKIKDIQESFFFEKVLENTKGSRFYCRQALDYLADDNVLEEKKGKYQIA
                     QDRMIVIPKDLNELLQKRLLHLQTKENAFELFGAMLLAGERLLFKDIHMLEIKDDAKI
                     IKYLEESDFVKIIDGKEIVIKNYNLFRENFITVCDKEKLQTVSQMLLEKIYINEPVIN
                     NVKAQLLEFAKLKKEAFAQWHSLAMVASQIGDFCAYLNCTNKFLSLVDNVIDVQTDQT
                     VEQVKMDVYAELASMLYKYYPDKILKFLQMLLTNLEHQKDDARIKEVANKLVQSCLIS
                     GNYNNALEYIGKIISRTQRSSFNPSDKNFNLNYFLVNMVTLEIYFNLGRLNECIELGD
                     ELFKHVNLKTVTTHILPEGFSEKQFEDAILDAVFFICASRVIQLKPDTIEVVQEFESR
                     MHKPYSCFRLLVLIKEFFEGKDILPAMQTLVQQGLNDKYSDILFPVVQGLVSWRFGDW
                     SNFGNYLHNAKLKAAALHLHQVEYFCDLMIGYAYQNLGDTKKTRQIFYNVLDLSEQKG
                     IKNITYLSWILIAKLEFDSGNAQMAVNIVNNSILNMENDNNVSEFFAVMFKSLSAEIM
                     LKTNSNIEQALFCAEQAFDTALKYKLNIYLPQIADMLLFIYNTVMSGQQSQEVVQSLN
                     QKIEYVKNSMAQFIQPK"
     gene            4023..4910
                     /locus_tag="CPT85_00215"
     CDS             4023..4910
                     /locus_tag="CPT85_00215"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27219.1"
                     /translation="MKILGLNTGINRTKSYPTSNKPYNLSFQGIDDKFIKDLSAIKTG
                     DKITGIGLVIDTPKIRNNNTGKTEDCLITYQNDYKNGCFRLIKNDKTKIQKIAGFFKS
                     NKELYKSYENNSFSFSDELLSHIKKISPETAADIEDLSISEIVYTSLCKKQEIQRAQE
                     LGYKKIDNNKDIVCIQNFIVYKKEYNNASRYVSVPVLRSLYQNKDKNIIIKANAFGKD
                     SASPVNLYLRYGFLPLKVSLEDIEKHKIKTSKGTRIDPSYHVIMYLPKDAVLYDILKK
                     ICPKYEIDAISPKWFKRID"
BASE COUNT         1618 a          886 c          796 g         1697 t
ORIGIN      
        1 gcacagctac agcagccccc acaacagaca gacaaagcgt aggcaaagcc agtgcaatac
       61 caacgcccat agtttctgtg gcagctctca tacctgtcct ttttacggaa agataagcca
      121 ctttattatt tgcgttatcc catacactga cactttgtat tgttacaggg gttttataaa
      181 tattgtttat ggtgtagtca taacctgtgt attttttaga aagtctgcta tgcaagtgtc
      241 ttgttgtctg ctcaattttt atgtaatcgt tttgttcaga cttggtttta cacaatgcag
      301 gaataaatgc attataaaac aacattaata atacaaaaag tgcagatacc ggctttttca
      361 tcaagcccct cctttttagc tttttcttat tttggctgta taaattgagc cattgagttt
      421 tttacgtatt ctattttttg atttaggctt tgaacaactt cttgagattg ctgccctgac
      481 ataacagtat tatatataaa cagcagcata tctgcaattt gaggcagata tatgtttaac
      541 ttatatttta aagctgtatc aaatgcctgt tctgcacaga atagagcctg ttctatattt
      601 gaatttgttt taagcattat ttctgcagac aatgatttaa acatcactgc aaagaactct
      661 gatacattgt tgtcattttc catatttaaa atagagttat ttacaatgtt aactgccatt
      721 tgagcattgc ctgagtcaaa ttctaatttt gctatcaata tccagctcaa atatgtaata
      781 tttttgattc ccttttgctc tgacaaatcc agaacattgt aaaaaatctg tcttgtcttt
      841 ttggtatccc ccagattttg ataagcataa ccaatcatca aatcacagaa gtattctacc
      901 tgatgcagat gaagagcagc tgccttgagt ttggcattat gcagataatt accaaagttt
      961 gaccagtcgc caaaacgcca gctcacaagc ccctgaacaa cagggaacaa aatatcagaa
     1021 tatttgtcat ttaacccttg ctgtacgagt gtttgcattg caggtaaaat atcttttcct
     1081 tcaaaaaatt cttttatcag cacaagcagc ctgaaacaag aataaggctt atgcattcga
     1141 gactcaaact cttgtacaac ttcgattgta tccggtttga gctgtattac tctcgatgca
     1201 cagatgaaaa agacagcatc cagtatagcg tcttcaaact gtttttctga aaaaccttcg
     1261 ggcagaatat gtgtagtaac agtttttaaa ttaacatgtt taaaaagctc gtccccaagc
     1321 tcaatgcact cattgagtct gccaaggtta aagtaaattt caagagtaac catatttacg
     1381 aggaagtaat taaggttaaa gtttttgtct gaagggttaa atgaacttct ttgtgttctg
     1441 gaaatgattt ttccgatata ctcaagtgca ttattgtaat taccgcttat aaggcagctt
     1501 tgcacaagct tgttagcaac ttcctttata cgtgcatcat ctttttgatg ctcaaggttt
     1561 gttaaaagca tttgtaaaaa cttcaatatt ttatcgggat aatatttgta aagcattgat
     1621 gccagctctg catagacatc catttttacc tgctctacag tttgatctgt ttgcacatct
     1681 atcacgttat ccacaagaga aaggaatttg tttgtgcaat ttaagtaagc acaaaaatca
     1741 cctatctggc ttgccaccat tgcgagcgaa tgccattgag caaatgcctc tttttttaat
     1801 tttgcaaatt ctaaaagctg cgctttaaca ttatttataa caggttcgtt tatgtatatt
     1861 ttttcgagca gcatttgaga aacggtctgc aatttttcct tgtcgcacac tgtgataaag
     1921 ttttctctga aaagattata attttttata actatttctt taccatcaat tatttttaca
     1981 aaatcagatt cttccaaata ttttattatt ttggcatcat cttttatttc aagcatatgg
     2041 atatctttaa acaagagcct ttcaccggcc agaagcattg caccaaaaag ctcaaaggca
     2101 ttttcttttg tttgaagatg taaaagacgc ttttgcaaaa gctcgtttaa gtcttttggt
     2161 ataacaatca tgcggtcttg tgcaatttga tatttgccct ttttttcttc cagcacattg
     2221 tcgtctgcta aatagtcaag tgcctggcgg cagtagaatc ttgagccttt tgtattttct
     2281 aatacttttt caaaaaagaa agattcctgt atatctttaa tttttttgat attttccgca
     2341 actatatttt tatttgaaga cggccttatt tctatttcaa aataattagg cgatgtcatt
     2401 agtttgtata tttttcgatg aagagaatac tgctcattac acgagacaat aaaaccgaca
     2461 ttacggaaac cgcgattttc gcaaaggtat ttgattatct caagtgagcc ttcatcaaca
     2521 ttgtcaaagt catctatcac aaatattgtt ttgtcgggta atgcagagat aaaattagta
     2581 aatgactcaa aatatgtata gcgtaaatcc tcagggtgga cttttgctga tatgtccatt
     2641 ttgaataaat caataatatt agaatcctgt gataaaactt caatcaaatc tgaattcaac
     2701 aggacattga gctctccgta acctctgtag gaaagaatca tctgcttaaa cagaccgtaa
     2761 ggactgtatt tattttgcgc cgggcacgaa aacctcacaa cattataatc ttcaaaaact
     2821 gtttttatat tttcagtatc tacaagagaa agtgaagagt tgcgtaaaga tgaacgcact
     2881 gatattatag ggtttgtgac atcttttgat ttgatttttt gtatttctga aagaagattt
     2941 tcccctctgg tttttacaaa tgtgcaattg aggctcgaaa aattaataag gtgcttttct
     3001 tcttcctctt cttccggttc atagtcaaca tttttgggta attttacatt atttatatca
     3061 aaatcgtcat ctttattttg ttcaggttta attatctgat gcagcatcag ctcaaagaac
     3121 ataaccatct gatttttgac atataccgca ctcaacgact ggaaaggata ttcgagcttt
     3181 gtttcctgat aaatgtaaga atcaacaaca acctctgtat tgttaaacag atgagagcgg
     3241 ccgcttgagg aataaaccac attaatatta agccctgctt tatattctga cggttttgag
     3301 tacacatccc ttttttgtac agccatctgc acttttagct caacaccttt tgcgtcaaaa
     3361 agttttttat taatttcggt tactgtttgc gcaacgtaga tagaaaaatc cagagcagat
     3421 ttgcaagatt ctaaaaatgt ataatctttg caaaaacgta taataaaagt atcttgcaaa
     3481 aactgaacgc gcagcttttt ttgtgctgct gtttttctta ttagagtgta gagatttttt
     3541 ttaaactgct ctactatttt atcgctttta aaagcatttt tgatatcgtc aaagtttgtt
     3601 atctcgattg ttaataccgc aaactcttct atcaccgatt ctctaagtcc aatgctggca
     3661 ttcacattca acccgcattt aggacacttt tctaatgcag cggagtttaa tttgccgcat
     3721 ttatagcatt tgtttataat tacagaaccg catttttcgc aaacagtatt ttttgtaatc
     3781 gcaccgcagg cagggcattg aagccgcaaa acctttttgc agttaggaca aacaagatcc
     3841 ttttctccga ttacggtatt acacttgggg cagttcatgg ggtactttcg tgcatattaa
     3901 tacatcttac tctttataat tataatatca ggattaaaaa agtaatcatc ttaattgtgt
     3961 ataaactgac ttgaagcaaa aatttccccg caaaaaaaat catttacggg ttttaaataa
     4021 atatgaaaat tttaggatta aacacaggca taaatcgtac aaaaagctat ccaacaagca
     4081 ataagccata caacttatca ttccagggca ttgacgataa gtttataaaa gatttgtctg
     4141 caataaaaac cggcgacaaa ataacaggaa tagggcttgt aatagatact cccaaaatac
     4201 gcaacaacaa tacaggcaaa acagaagact gccttataac atatcaaaat gactacaaaa
     4261 acggatgttt tagattaata aaaaatgaca aaacaaagat acaaaaaatt gccggatttt
     4321 ttaaatcaaa taaagaatta tataaaagct atgagaacaa tagtttttca ttttctgatg
     4381 agttgttatc acatataaaa aaaatatccc ccgaaacagc tgcagatatt gaggacctgt
     4441 ctatatctga aattgtctat acatccttat gcaaaaaaca agaaattcaa agagcgcaag
     4501 agctcgggta taaaaaaatt gataacaaca aagacattgt gtgtattcaa aattttatag
     4561 tttataaaaa agaatacaat aatgcctcaa gatatgtctc tgttcctgtt ttaaggtctt
     4621 tgtatcaaaa taaggataaa aatattatta taaaagcaaa tgcctttggc aaagacagcg
     4681 cctcacctgt taatttgtat ttgagatacg gttttttacc gctcaaagtg agccttgagg
     4741 atattgaaaa acacaaaata aaaacaagca aaggtactag aattgatcct tcttatcacg
     4801 taataatgta tctgcctaaa gatgcggttt tatacgacat tttaaaaaag atatgcccta
     4861 aatatgaaat tgatgcaata tcaccaaaat ggttcaaaag aattgactag acttttataa
     4921 aatccttaaa aactctgttt gttggttcct ttttcttatt ttcccgtaca ataaaatttt
     4981 tggggtcgtg taaatca
//
LOCUS       DABS01000007            2534 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_28944, whole genome shotgun sequence.
ACCESSION   DABS01000007 DABS01000000
VERSION     DABS01000007.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            160..1326
                     /locus_tag="CPT85_00220"
     CDS             160..1326
                     /locus_tag="CPT85_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008790768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="DAB27212.1"
                     /translation="MNDIEFIETLKQKRNACDYSQSRLAQELQISRQNLNEIENGKTK
                     ASKEMKHILLHYLDYCNCTQPFTLTIDYLRVRFPTTDALEIIKNVLAMKSEYFIHEDY
                     GMFGYEEQYIYGDISVNASKDSSMGVLLELRGMGCRNLEYVLQARGIDWYYFLSSCID
                     YQGVFKRIDLAVNDMGGLLDIEILRERYYANKVWKRSRTHEAVDSGKLSGTHGDTAKT
                     FYIGSKNSSIYFCLYEKEKEQKSKGIKTDIKNRFEIRLKSGKAEQTIEQLVFSRNPEQ
                     TIASLILTQIDFPVYILWDIFLDNVTTSLPFIMTPVAVNMDKTKRWLERQVMPSLLMI
                     KEIEKQTGANYLEEIDRHTRLTEKQELKIKQMTTDIADMIEKDTAVPQGNDGIF"
     gene            1310..1489
                     /locus_tag="CPT85_00225"
     CDS             1310..1489
                     /locus_tag="CPT85_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006441073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27213.1"
                     /translation="MTVFFNFFKKSATKRLLAYRYGARKGNLTFFQNYSLNRGXXTLF
                     VSSVGARKKKFYFIS"
     assembly_gap    1429..1430
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1743..1785
                     /estimated_length=43
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<1786..1965)
                     /locus_tag="CPT85_00230"
     CDS             complement(<1786..1965)
                     /locus_tag="CPT85_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009321353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27216.1"
                     /translation="MAVREYHYQTGQVMAIKEDKSFTGTQIGYRSLLLEKGHGVSVST
                     ARCLSKVLNCFIQLSK"
     gene            2056..>2256
                     /locus_tag="CPT85_00235"
     CDS             2056..>2256
                     /locus_tag="CPT85_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008394616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA wybutosine-synthesizing protein 3-like
                     protein"
                     /protein_id="DAB27215.1"
                     /translation="MNCLEKIFTERGVCVIADIVKTRQEKTNNKRGIGNRGKTKIVVK
                     EHFSEKGKTMEELLTDVMLEKAK"
     assembly_gap    2257..2310
                     /estimated_length=54
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2368..>2534
                     /locus_tag="CPT85_00240"
     CDS             2368..>2534
                     /locus_tag="CPT85_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003019515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="resolvase"
                     /protein_id="DAB27214.1"
                     /translation="MKQQIYNTALYLRLSRDDELQGESSSITTQRSMLRLYAKEHHLN
                     VIDEYIDDGWSG"
BASE COUNT          870 a          362 c          502 g          701 t
ORIGIN      
        1 gatatgcaac gatttataag gttataagaa cttatttcac ttcacaccat attcttttta
       61 cccgacaggt ctaaaacagc atatcaatag aaaataaata taagatacaa ggtgtatgct
      121 cctatgagta tatgcctttt ttgattggag gaatgaagca tgaatgatat agaatttatt
      181 gaaacattaa agcaaaagag aaatgcctgt gattattcgc aatcacgact ggcacaggaa
      241 ttgcaaatta gcaggcagaa cttaaatgaa attgaaaacg gaaaaacaaa agccagtaaa
      301 gaaatgaaac atatactttt acattatctt gattattgta attgtacaca gcctttcact
      361 ttaacgattg actatctgcg tgttcgtttt cctaccacag acgcattgga aattataaaa
      421 aatgtactgg caatgaaaag cgaatatttt atacatgaag attacggaat gtttggttat
      481 gaagaacagt atatctatgg ggatattagt gtaaatgctt ctaaagatag ttctatgggt
      541 gttttattgg aattaagagg tatggggtgt cgaaacttgg aatatgtttt acaggcaaga
      601 gggatagact ggtattactt tttaagcagt tgtatagatt atcaaggtgt ttttaaacgc
      661 atagatttgg cggtcaatga tatgggcgga ttgctggata tagaaattct aagggaacgt
      721 tattatgcca acaaggtatg gaaacgttca agaacccatg aagcagtaga cagcggaaaa
      781 ttatcgggta cacatggaga tactgcaaaa actttttata tcggttcaaa gaatagttct
      841 atttactttt gcttgtatga aaaagaaaag gaacaaaaaa gcaaaggtat aaaaacagac
      901 attaagaacc gatttgaaat tcgtttaaaa agtggaaaag cagaacaaac gatagaacaa
      961 cttgtttttt caagaaatcc cgaacagacc atagcaagcc ttatcctcac acagatagat
     1021 tttcccgttt atattttatg ggatatattt ttagataatg taacgacttc acttccgttt
     1081 attatgacgc ctgttgctgt caatatggat aaaacaaaac gttggttaga aagacaggtc
     1141 atgccctctt tattgatgat aaaagagatt gaaaagcaaa caggagcaaa ttatctggaa
     1201 gaaatcgaca gacatacaag actaacagaa aagcaggaat taaaaattaa acaaatgaca
     1261 acagacatag cagatatgat tgagaaagat accgctgttc cacaagggaa tgacggtatt
     1321 ttttaatttc ttcaaaaaat ctgcaacaaa acggctactt gcgtacagat atggtgcgag
     1381 gaaaggaaat ctaacttttt ttcaaaacta ctcattaaat cgaggtttnn aaacattgtt
     1441 cgtgtcgagt gttggagcaa gaaagaagaa attttatttt atttcttgat tttgtattca
     1501 actaggcatt tgcagttgag tgttgatgtg aaaagaagaa aatattttca ttctcaactt
     1561 aacctttggc agttgccgtt ccctatatgg agcaaagaaa atctttcatt ccatagttgg
     1621 caataacggt gttgcatggg tagttagggt atgaaaagaa gttttttcat cagcaactta
     1681 gcagaatgac actttctttc cctatatggt acaggaaaag aaaaaagttt tgaatattgg
     1741 ttnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnctttg acaactgaat
     1801 aaagcaattc aataccttag acagacagcg agccgttgaa acagatacgc catgaccttt
     1861 ctccagcaaa agcgagcgat aacctatttg tgttcctgta aaagatttgt cctcttttat
     1921 cgccatgacc tgtcctgtct gataatgata ctcccgtaca gccacagctt gagcgttcag
     1981 agcgtcgcac gcaatgggta cggctacata agaactatgc agaggtggaa ctcctgtggg
     2041 ctatgacaaa tgccattgaa ttgtttagaa aagattttta cagaaagggg ggtatgtgtt
     2101 attgctgata ttgtaaaaac aaggcaagaa aagacaaata ataagcgtgg cattggcaac
     2161 agaggaaaaa caaagattgt tgtaaaagag catttttctg aaaagggaaa gacaatggaa
     2221 gaacttctga ctgatgttat gcttgaaaag gcaaagnnnn nnnnnnnnnn nnnnnnnnnn
     2281 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn tttacttgca agcaggtatt gtaaacatgg
     2341 gttagttata aaggaggata actgacaatg aaacaacaga tttacaatac tgcactttat
     2401 cttaggttaa gccgagatga tgaattacag ggcgaaagtt ccagcattac cacacaaaga
     2461 agtatgttgc gtctatatgc aaaagaacat catttgaatg tgattgatga gtatattgat
     2521 gacggctggt cggg
//
LOCUS       DABS01000008            2815 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_7645, whole genome shotgun sequence.
ACCESSION   DABS01000008 DABS01000000
VERSION     DABS01000008.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2815)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2815)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2815
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            105..1202
                     /locus_tag="CPT85_00245"
     CDS             105..1202
                     /locus_tag="CPT85_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019940486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase DegT"
                     /protein_id="DAB27209.1"
                     /translation="MLSSTEERIFVTKSFLPPLGEYEAYIKQVFQNGQLTNQGPLLQK
                     LQEKLSCYLDVKNLHYVTNGTIAIQLALKALDIEDGEIITTPFSYVATVSSILWERCT
                     PVFVDIEADNFTIDADKIEKAITPKTKAIIAVHVFGYACNTEKIEAIARKHNIKVIYD
                     AAHAFGSLYKNKSLLDFGDISTCSFHATKLFHTIEGGACIVKDKAISDRLELIKRFGH
                     QGDEHFCLGINAKQSEINAAMGLANFEYLNEILAKRRQAVQLYDNILCGLLQRPAKQK
                     DLQYNNAYYPVLFKNEQQLLSVFKSLNEKGIFPRRYFYPSLNKLPYINKTQDCPVSED
                     ISSRIACLPLFNDITEKQIKTICNIIRGELA"
     assembly_gap    1358..1433
                     /estimated_length=76
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <1434..2357
                     /locus_tag="CPT85_00250"
     CDS             <1434..2357
                     /locus_tag="CPT85_00250"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27210.1"
                     /translation="ICPDAQCVITTFPSKVTYAHNTFFKNDEKIYRWEQIVNNAKNVK
                     ELIIHIPEYFSDKFSTALTNKDFKFLKQIENVQINILNQNIELMPEPEKIKGLYKITN
                     NVTQTIAHDRYATQEVCDKWQIPTHFLSVHIDTSGYRSYAFEEKEKIIVLSPDEAPYK
                     EAIVKKLKQELPDFKLITVENMPFDEYMDLIAKAYFTISFGEGFDGYFLLPPLVGSIG
                     VAVYNEKFFPNEHWLELENVFANQERMIQFITKTIDSYSKDKASYENLSIKAKKWHDN
                     LYSLEDFKHNLKAFYDHIYKYRPVNNGEINK"
     gene            2369..>2815
                     /locus_tag="CPT85_00255"
     CDS             2369..>2815
                     /locus_tag="CPT85_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016279252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27211.1"
                     /translation="MQPYFFPYIGYWQLINAVDKFVIYDDVNFIMRGYINRNAILING
                     QAYKFSIPLEKPSQNKLINETKLNFSDSAKNDFLKTIELAYKKAPCYKEVYPVLNKII
                     YNKETDLTTFIKFAIKTVNQYLGINTEILLSSDIEKDNSLKGQNKII"
BASE COUNT         1069 a          409 c          426 g          835 t
ORIGIN      
        1 ataattaatt ttttttatta gtatttatat tataatacaa atgttccata tattttttat
       61 aaaaaactga atagtaaacg agcagattaa ggggagtaga cttaatgctg tcttcaactg
      121 aagagagaat atttgtaacc aaatcattct tgcctccttt aggcgaatat gaagcatata
      181 taaaacaagt ttttcaaaac ggccaattaa caaatcaagg gccgttatta caaaaactgc
      241 aggaaaaatt atcctgttat ttagacgtaa agaatctaca ctatgtaaca aatggcacaa
      301 tagctattca acttgcacta aaagcccttg atatagaaga tggagaaatt attacaactc
      361 cgttttcata tgttgcaacg gtttcttcca tattgtggga aagatgcacc cctgtttttg
      421 tagatataga agctgataat tttacaatag acgcagataa aatagagaaa gctatcaccc
      481 ccaaaacaaa agcaataatt gctgtacacg tttttggata tgcatgtaat acagaaaaaa
      541 ttgaagctat tgcacgcaaa cacaatataa aagtaatata tgatgcagct cacgcatttg
      601 gttctttata caaaaacaaa tcgttgctcg attttggtga tatttcaacc tgtagctttc
      661 atgcaacaaa gttattccat acaatagaag gcggagcttg tattgttaag gacaaagcta
      721 tatctgacag gttggagttg ataaaaagat tcggccatca gggagatgaa catttttgtt
      781 tgggtataaa tgcaaaacag tctgaaatta acgctgcaat gggattggca aatttcgaat
      841 atcttaatga aatccttgca aaaagaagac aagctgtaca gttgtatgac aacatcttgt
      901 gcggactgtt gcaaagacct gcaaaacaaa aagatttaca atacaacaac gcttattacc
      961 ctgtattatt caaaaacgaa caacaacttt taagcgtctt caaatcattg aatgaaaaag
     1021 gaatttttcc aagaagatat ttttacccca gtttgaataa actgccttat ataaataaga
     1081 cacaggattg ccctgtatca gaagatataa gttctagaat cgcttgttta ccgttgttta
     1141 acgatataac agaaaagcaa ataaaaacaa tctgcaacat cataagagga gagttagcgt
     1201 gaagatagat ttttcaaaac tcttttctta tacaaaaaat agtgactata taactgttaa
     1261 atttttaggc ataaaacttt gtgtaaaaaa taaacaaaag gtgcttgatg ctataaaaat
     1321 acaaaacagt tatgatttgt cgaatataaa aaatacannn nnnnnnnnnn nnnnnnnnnn
     1381 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnatttgtc
     1441 ctgatgcaca gtgtgttata acaacattcc catcaaaagt tacttatgcg cataatacat
     1501 tttttaaaaa cgacgaaaaa atttaccgct gggaacaaat agttaacaat gcaaaaaatg
     1561 ttaaggagct aataatacac atcccggaat atttttccga taaattcagc acagcattaa
     1621 caaacaagga ttttaagttt ttaaaacaaa ttgaaaatgt tcagataaat atattaaacc
     1681 aaaatatcga gttgatgccc gagccggaaa agattaaggg tttatataaa attaccaaca
     1741 atgttactca aaccatagcc catgacagat atgccactca ggaggtctgt gacaaatggc
     1801 aaattccgac acattttctt tctgttcaca tagatacttc aggatatagg tcctatgcat
     1861 ttgaagaaaa agagaaaatc attgttttgt ctcctgatga agcaccatat aaagaagcta
     1921 tcgtaaaaaa attaaaacag gaacttccgg attttaagct gattacagta gaaaatatgc
     1981 catttgacga gtacatggat ttgatagcca aagcttattt tactatcagc ttcggcgaag
     2041 gatttgatgg gtattttctt cttccaccct tagttggaag tattggagtt gctgtttaca
     2101 atgaaaaatt ttttcctaat gaacactggt tagagttgga aaatgttttt gccaatcagg
     2161 aaagaatgat tcaatttata acaaaaacta ttgactctta tagtaaagat aaagcttctt
     2221 acgaaaattt atccataaaa gcaaaaaaat ggcacgataa tctctacagt ttagaggact
     2281 ttaaacacaa tctaaaagca ttttatgatc atatatataa atatagacct gtcaacaatg
     2341 gagaaataaa caaatgaaaa tagggataat gcagccatat tttttccctt atataggata
     2401 ttggcaatta ataaatgcag tagataagtt tgttatatat gatgacgtaa attttataat
     2461 gcgaggttat ataaatagaa atgctatctt gattaatggc caagcttata aattttctat
     2521 accattagaa aaaccttcac aaaataaatt aattaatgaa acaaagttga atttttctga
     2581 ttcagccaaa aacgattttt taaaaacaat cgaattagct tataaaaaag ccccatgtta
     2641 taaagaagtt tacccagttc ttaataaaat aatttacaat aaagaaacag atttaactac
     2701 ttttataaaa tttgcaatca agactgtcaa tcaatatttg ggtattaata cagaaatttt
     2761 gctttcttct gatatagaga aagataattc tttaaaagga caaaataaaa ttata
//
LOCUS       DABS01000009            2882 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_19967, whole genome shotgun sequence.
ACCESSION   DABS01000009 DABS01000000
VERSION     DABS01000009.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            16..321
                     /locus_tag="CPT85_00260"
     CDS             16..321
                     /locus_tag="CPT85_00260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009350348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27208.1"
                     /translation="MGNDVWIGCDVTILDGITIGDGAIVGAGSIVTKDIPPYAIVGGA
                     PAKIIRYRFDEQTIKDLLLLKWWDLDEENIKTLPFDNVAKCIDKLKTIRKINNYDTK"
     gene            380..2097
                     /locus_tag="CPT85_00265"
                     /pseudo
     CDS             380..2097
                     /locus_tag="CPT85_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005876237.1"
                     /note="frameshifted; too many ambiguous residues; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
     assembly_gap    1522..1523
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1745..1776
                     /estimated_length=32
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2134..>2882
                     /locus_tag="CPT85_00270"
     CDS             2134..>2882
                     /locus_tag="CPT85_00270"
                     /inference="COORDINATES: protein motif:HMM:PF05045.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27207.1"
                     /translation="MKQDCKICVICHLYYQNLWPEIKNYLSNLTKFSNFDLYVTCNSS
                     NQELFDDIQNSFNTSGKVNIDIIENLGADIYPFIYELNKINLDDYDIVFKLHTKHNVE
                     YXNNCLCGKNLWRDFMLTSILSEKNIPLVIKSFKENKKIGCIGFEPLLITISNKNKEY
                     FYNKYVQELNLKKLKTYKFYGGTIFAIKAELLKCLQHKYYDTDFINNQNTKFPAICYA
                     IEDLLGYIVEAQDHIFYDLHPIQGFIIKLFS"
     assembly_gap    2443..2444
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1082 a          396 c          471 g          897 t
ORIGIN      
        1 gtagaaccag tatatatagg taatgatgta tggataggct gtgacgtaac aatacttgac
       61 ggtataacaa taggagatgg agccattgta ggagcaggat caattgttac aaaagatata
      121 ccaccttatg caatagttgg tggagctcct gcgaaaataa taagatacag atttgatgaa
      181 caaacaatta aggatttgtt attattaaaa tggtgggatc ttgatgaaga gaatataaaa
      241 accttaccat tcgataatgt agcaaagtgc atagataaac ttaaaacaat tagaaaaatt
      301 aataattatg atacaaaata aattacaatc atttaaggaa aaaattacaa cgacacagtt
      361 ttttgttaat tataaaagaa tgtggcctta tataagacca tactggttta gagcacttat
      421 ggcggtatta atttgtatac ctattggttc actggatgct atcattgcac tttctctcaa
      481 gccatatatg gatctggtta tggtagaaaa aagcatagcg tcaccttggt acatcccctt
      541 tggaatcgtc gcttttacct ctattcaagg aggcctaaat tatcttgcta catatttaaa
      601 cacctgggtt ggtggcaaaa tttcaaacgg tttaaaatat gatttgttta aaaaactact
      661 tacatttgaa acatcatttt atgataaaag gagctccggc gatgtggtgt tccagtttaa
      721 taacaatgca gatcttgctt gtacaggatt gcttgataat ctaaaagtat tcactcaaag
      781 attattctct tctgtttctc ttgtttgtgt attattttat aattcatggc agctggcctt
      841 aattgctgta gtagtattag gtgcggcatt tgcacccgtt gcgaaaataa gaaagagaat
      901 aaacgatgta atgcagaaaa cactcgtggc agatgcagct gtcatcacag catataacga
      961 agcttatgca ggcaacaaaa ctataatatc ttataacctt tctcaagatc aaaaaaataa
     1021 atttttcaat atattaaaaa gtatatttac gttgagaata aaaatggtac aaagaacatc
     1081 ctggctttct ccaatgatgc acgtaattgt atcggttggt ataggcctgg ccattggttt
     1141 tggaagtcat ttgatactta caaaacaaat aacgagcgga aattttgtat cgtttataac
     1201 agctttaatt atgctttata gtccaataaa aagtatcgga aataacttca atcaacttca
     1261 gttatcattc tttgcaatag aaagagtatt tgatgttttg gatgcagaac cagcaataaa
     1321 agacacagac aatgctgttg aattaaaaaa taattattca gaaatagagt ttaaagatgt
     1381 ggtatttgaa tacataccag atgtccctgt attaaatggc ataaacctta aaataaaaaa
     1441 aggacaaaca atagcttttg taggaaattc cggcggagga aaaactactt tagtcaatct
     1501 tatcccacgt ttttatgatg tnngaatccg gggctataat gatagacggt gttgatataa
     1561 gaaactacac actgaaatca ttaagacaaa atatcgcaat tgtatttcag gataatttcc
     1621 ttttttccgg aacaataaga gaaaatatta tgcttggtaa tgaaaacgca actgaagaag
     1681 agctgcaaca agctattaaa atggcatatt tagatgattt tattgagtca ctggaaaata
     1741 aagannnnnn nnnnnnnnnn nnnnnnnnnn nnnnnncaac gtgtggcaat cgcaagagca
     1801 tttttaaaaa atgcgcctgt tgttatactt gatgaggcaa catcagcact ggataacaaa
     1861 gctgaagctg ttgtgcaaaa agccattgat aacctcatga aggataagac tgtatttgta
     1921 attgctcata gactttcaac aattcaaaat gctgataaaa tagttgtcat aaatgaaggt
     1981 aaaattgccg aaacaggtac ccatatagaa cttttaaata ttgaaaacgg tgcatacaga
     2041 tctttatata atgcacagtt caaaaaacaa gaagacaaca aaacagcagt atgttaatat
     2101 aaagacaaat aacaaaaaaa aattaagatt taaatgaaac aagattgtaa aatttgtgtt
     2161 atttgtcatt tgtattatca aaatttatgg ccagaaataa aaaattattt atcaaattta
     2221 acgaagtttt caaattttga tctgtatgtg acttgtaact cgtctaatca agagcttttt
     2281 gatgatatac aaaattcttt taacacatcc ggcaaagtaa atatagatat tatcgagaac
     2341 ttaggtgctg atatttatcc atttatttat gagctgaata aaataaattt agacgattat
     2401 gatattgttt tcaaattaca tacaaaacac aatgtagaat atnnaaataa ttgtctctgt
     2461 ggaaaaaatc tgtggagaga ttttatgctt acctctatat taagtgaaaa aaacattccg
     2521 cttgtaatca aaagctttaa agaaaataag aaaattggtt gtataggctt tgagcccttg
     2581 ttgattacca tatctaataa aaataaagaa tatttttata acaaatacgt acaagaatta
     2641 aatttaaaaa aattaaaaac ttacaaattt tatggtggaa caatatttgc aataaaagca
     2701 gaattattaa aatgcctaca gcataaatac tacgatacag attttataaa taatcaaaat
     2761 actaaatttc ctgctatctg ctatgctatt gaagatttat taggatatat tgttgaggca
     2821 caagatcata ttttctatga tttacaccca atacaaggat ttattataaa attattttct
     2881 ca
//
LOCUS       DABS01000010            8243 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9447, whole genome shotgun sequence.
ACCESSION   DABS01000010 DABS01000000
VERSION     DABS01000010.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8243)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8243)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8243
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(55..1865)
                     /gene="rpoC"
                     /locus_tag="CPT85_00275"
                     /pseudo
     CDS             complement(55..1865)
                     /gene="rpoC"
                     /locus_tag="CPT85_00275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008497419.1"
                     /note="frameshifted; too many ambiguous residues;
                     incomplete; partial in the middle of a contig; missing
                     stop; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
     assembly_gap    1358..1393
                     /estimated_length=36
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1897..5203)
                     /gene="rpoB"
                     /locus_tag="CPT85_00280"
                     /pseudo
     CDS             complement(1897..5203)
                     /gene="rpoB"
                     /locus_tag="CPT85_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015219404.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
     assembly_gap    4468..4469
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    4676..4677
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5604..5885
                     /locus_tag="CPT85_00285"
     CDS             5604..5885
                     /locus_tag="CPT85_00285"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27204.1"
                     /translation="MGVNILDRIYKASEMSGDIKDIVVFTESFKCYGTIVKDHKDNLK
                     DILTLKDATICHHFDECSCNIESPKYEWLNINEEKIIAFSILGYMTCEN"
     gene            complement(5887..6687)
                     /locus_tag="CPT85_00290"
     CDS             complement(5887..6687)
                     /locus_tag="CPT85_00290"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00669.18,HMM:PF00700.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27205.1"
                     /translation="MPIGIYSAQTGMVQAQRTFEKAAESIASGINSYVNPADKYVATG
                     LDTTIRSAKKAIENAQTGYNFTAVADSALGNVSESLQRIRELSIQASNGIYSDSQRAV
                     IQQEINQNVEQIKQTLGQSTFNGKPTINAVTPENPNPAPVTDFMVGTDSTSIISYDPN
                     IALDSLNFDVSTPEAAAASLAQADSMLSDIGSKRGEIGAVQSSLEGAINQQMTNIMST
                     TASLSDIQDTDYISAITDLKKAQFSMELMAKVMKTVMNSERYVLDLLQ"
     gene            6892..>8243
                     /gene="murC"
                     /locus_tag="CPT85_00295"
     CDS             6892..>8243
                     /gene="murC"
                     /locus_tag="CPT85_00295"
                     /inference="COORDINATES: protein motif:HMM:TIGR01082"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="DAB27206.1"
                     /translation="MDSINNNLQTFPRFHFIAIGGIGMSGLAKYLLELGCEVSGSDIK
                     ESKYTKKVEALGAKVFIGHDANYIQPDMIVVASTAIKDNNPEKIRAKELGIEVLHRSD
                     VLKMISEGLGRKDTEKQQFIGFSGTHGKTTTSGLCSYVLEKAGYEPSYCVGGIIPDLD
                     TNAKSGNGKYFVAELDESDGTIVKYHTNLSVINNLEVDHVDFYKNGFDDLLKTFRTHI
                     DNRAEGGKVIVNKDCNGIKKLIAANPDIKFITFGIESGGVDYSARNMKFTEFGSEFDI
                     FHRGEKIISLKLTIPGKHNIYNALAVLSALNEEGVDLEKVKPHFETFSGMGRRFQKVA
                     EFDGIRIFDDYAHHPTEIKTTLDSARLCNTNRLVAIFQPHRFSRLKGLWDDFTKSFTA
                     VDKLIVVDVYSASEDAIEGINSKTFAQSFQNEDVTYVGGSMENAARKILPLLKSGDMV
                     "
BASE COUNT         2395 a         1667 c         1586 g         2555 t
ORIGIN      
        1 aatatcaccc aagttgaatg acaaaccacc cttgaacgcc atctgataac ctaaattctt
       61 gattccatcc aggaagtcgg cagccttagc cacaccacat accttaatta catcactaat
      121 aatatcacga agagatttct tagagataat tgtattgata taaccagctt caggtggaac
      181 gatttcattc acaatcacac gtcctactga agtttcgcgc attacgtcta caatgttacc
      241 attttcatca acgtctttca cgataacctt caccggagca tgaatatcta ccttaccttc
      301 attgtaagcg atcaacgctt cttccggtcc gtagaatgtc aaaccttcac cttttgcacc
      361 ggcacgcaac ttagtaatat agtacaaacc aagaaccata tcctgtgcag gtacagtaat
      421 aggcgcaccg tttgccggat tcaagatatt atgtgattga agcatcaaca tttgtgcttc
      481 aagaattgct tcattactca aaggcaagtg aacagccatc tggtcaccgt cgaagtcagc
      541 gttgaatgct gtacaaacga gcgggtgaag ctggattgct ctaccttcaa ccaatttagg
      601 ttcaaacgcc tgaataccca gtctgtgaag tgtcggggca cggttaagca ttacagggtg
      661 tccgtcgatt acttcttcca agatatccca aactacgggt tcagaacgtt ctattttctt
      721 tttagcagat ttgatgtttt gtaccaaacc gcgttcaatt aatttattaa caacaaaagg
      781 tttgaacagc tcaattgcca tttctttagg caaaccgcac tggttcaact caaggctcgg
      841 gcctacaacg ataactgaac ggcctgagta gtcaacacgt ttacccagca agttttgtct
      901 gaaacggccc tgtttacctt cgatgatatt tgataatgat tttaacggtc tgttattagg
      961 gccaacaaca gttctgcctc ttctgccgtt atcgataaga gcgtcaacag cttcttgaag
     1021 catacgtttt tcgtttctta cgatgatttc gggagcgccc atctcaagca atctcaacaa
     1081 acggttgttt ctgttaataa cacgtctgta aaggtcgttt aagtcagatg ttgcaaaacg
     1141 tccgccgtcc aattgaacca taggtctcaa gtccggagga gtaacaggca atacatccat
     1201 aatcatccag gtaggttctg tatttgaagc aattaatgat tcgattaatc ttaatctctt
     1261 aattaatttt gctctttttt gtacagagcc gcctgcttga gccaattcgc ctctgatttc
     1321 ttcaacgagt tctgtcatat tgatttcgcc gagaagtnnn nnnnnnnnnn nnnnnnnnnn
     1381 nnnnnnnnnn nnnccatgat gaagtcttcg tattcttctt ctgaaagcaa ttgatatttt
     1441 ttgaatcctg aatcagcagg gtcgattaca acatagttgt tgaaatagat aacctgttcg
     1501 agatctttta aagacatatc caaaagcaag cccagatatg aaggaatacc cttcaagaac
     1561 cagatgtgag aaacaggagc agccagtttg atgtggccca ttctgtgtct tcttactttt
     1621 gaatcagtaa cttcaacgcc gcagcgttcg cagatgatac ctttgtgtct tacgcgtttg
     1681 tacttaccgc aatagcattc ccagtccttt gtaggtccaa agattctttc gcagaacaaa
     1741 ccgtctcttt caggtttcaa tgttctatag ttgattgttt ccggttttgt aacttcaccg
     1801 tatgaccatt tcagtatacg ctccggagaa gcgatactta ttcgtatata gtcaaaataa
     1861 tctatacttg tagacaattt attatctcct tattagttat tctttaaatg atgtaggcgt
     1921 ttcaaagaag ttgatattca acaactctga atcgatgtca gataatgttc tttttgcaga
     1981 tgattttctt aaatcatcag tgtcagacat taagtcgacc tcttcgccgc cttttttagc
     2041 aacggtgata tccaaaccga ttgattgaag ttctcttacg agtactttaa acgattcagg
     2101 aataccaggt cttgggatgt tgtcgccttt aacgattgct tcgtatgctc ttgaacgtcc
     2161 gttaacatcg tctgatttga ttgttaacat ttcttgaaga gtataagcag caccgtaagc
     2221 ttctaatgcc caaacctcca tctcaccgaa tctttgaccg ccgaattgag ctttaccacc
     2281 cagaggctgt tgagttacga gtgagtatgg acctgtgctt cttgcgtgaa ttttgtcatc
     2341 tacaaggtga acaagtttca atacatatgt caaaccaact gcaaccggtc tgtcgaacgg
     2401 ctcgccggtt ctaccgtcga taagtctaac tttaccgtct tcaccgaccc agtcgattcc
     2461 cattttctta atacctttaa gaagctcttc tttggtaact ttttcactca taccaccacc
     2521 gtacatttca tcgaatgacg gagcttcgta gtactctttg ttcaagtatg ctgccatacc
     2581 gagcaagttt tcgtaagttt gacccacgtt catacgggaa ggtacaccca gcgggttcaa
     2641 tactacgtca acaggagttc cgtctggcaa gaaaggcata tcttctttag gtaatattct
     2701 tgaaacaata cctttgttac cgtggcggcc tgaaagtttg tcaccaacag atactttacg
     2761 tttttgagca atgtaaactc tgataacagt gtttgctcca ggaggcaatt catcaccttt
     2821 ttcacggtcg aatactttaa cgtcgactac gcggccgcct tcaccgtgag gaactctcaa
     2881 ggaattatct tttacatctc ttgctttttc agcaaagatt gctcttaaca gtttttcttc
     2941 aggcgggtgt tcagattcac ctttcggtgt aactttacct accagaatat cgtctgcgta
     3001 aactcttgca ccgattctta cgatacctct ttcgtctaag tgacgtaaag attcttctga
     3061 aacgttcgga acttctcttg tgatttcttc cggtccgagt ttagtttgac gagcgtctat
     3121 ttctaatttt tcgatgtgta cagaagtgaa gatatcatcg tgaacgcatc tttctgaaag
     3181 caagatagca tcctcgtagt tataaccttc ccaaggcata taagccaaaa gaacgttctt
     3241 accgagtgaa agttcaccgc agtgtgtaga agcaccgtca gcaattacat cgccagcttt
     3301 aacttcgtca ccgtctctta cgataggctt ctggttaata caagtatcct ggttacttct
     3361 tacatatttc attaattgat atctgtggag tttgttggca ttgtctctga tgtagatttc
     3421 ttcacccaca actttttcaa caacgccgtc aacatcagat acaacaacca tgccggagtc
     3481 ttttgcagct ctcttttcaa gacctgtacc aacaacagga cggtctgtga taagaagagg
     3541 tactgattga cgctgcatgt ttgaacccat caatgcacgg tttgcgtcat cgtgctcgat
     3601 gaacggaatc aatgaagtcg caacggagaa gatttgaatc ggagatacac cgatgtagtc
     3661 tactctgtta ccttctgaca ttgtaaactc tgatctgtaa cgtacaggta cgtatggata
     3721 tttgatactt ctgtcttcgt tcagctcaag gtcagcaggc gcaatacgga ggttgtcttc
     3781 ttcatctgct gtgaggtagt gtacttcgtc agttacaaca ccgtctttaa cagcaaagaa
     3841 cggagactca ataaatccgt agtcgttaac tttagcgtga gtagccaaag aaccgataag
     3901 acctgcgttc ggaccttcag gagtttcaac aggacaaata cgtccgtagt gtgaagggtg
     3961 aatgtcacga acagcaaagc cggctctttc tctaaccaaa ccaccaggtc cgagagctga
     4021 gatacgtctt ttgtgagtca actctgccaa cgggttaatc tggtccatga actgtgacaa
     4081 ctgtgatgag ccgaagaact cttttaatga agcaactaaa ggtttagtgt tcaaaaggtt
     4141 caacggggtc aaagtgtcag catcttgaag agtcattctt tctttaacaa ttctttcgat
     4201 tcttgaaaga ccgactctaa attggttttg caacaattca ccaactgaac ggattcttct
     4261 gtttccgagg tggtcgatat catctacaga accttcatca taagttaagt taattaagta
     4321 ttcgattgaa gctaccaagt cttgaacagt gattgttctt tgagtttcag gcaagttcaa
     4381 accgagtttt ttgttcagtt tataacgacc tacacgaccg atatcgtatt tcttttcatc
     4441 aaagaaacga gcttctaaga tagaacgnna gcagaagcgg ggtcaccggg tcttaatttt
     4501 ttatagattt cgattaaagc atcatcagtt gtctctgtag tgtctttgtc cagagtcttt
     4561 ttcaagaatt ctgcgtgagt gaacaaagtt tccatttcag aaacagtgat gccaagagct
     4621 ttcaacaatg ttgtagctaa gatttttctg tttttgtcaa tcttaacgta gatgtnncat
     4681 ttgcgtcagt ttcgattttt aaccatgcac ctctgttagg aataagagtt gcgttatata
     4741 aacgtttacc tgtcggagag atttcacgtt tgaaatacac acccggagaa cgaacgattt
     4801 gagaaacgat aacacgttct gcaccgttta caatgaatgt acctttgtca gtcattgtcg
     4861 ggatgtcgcc gatgtaaact tcttgttctt taatttcacc ggtgtcacgg ttaacaagtc
     4921 ttaccataac acggagttgt tttgcataag tagcgtcatg gatgcgtgct tcttcaatcg
     4981 tatactttgg attgtcaaaa gtatagtttg gaaggaagtg caattccaaa cgacctgtgt
     5041 agtctttgat aggagagaac gatagtaact cttcctttaa gccttctttt aaaaaccatt
     5101 caaaagaatt cttttgtact tcaataagat caggtaaatc atccaatctg gtattaggga
     5161 tacccatcgg tgttactctg gttgcttgat ttgttgtcga catttattta cctcgctaaa
     5221 tgtggcgtac tacattgttt cttgtgtaaa ctgttgttat taatttttcg gacacagagg
     5281 ggcttttggc cgcttctgtt tataagattt tgtaattaca atacattttt actcatatct
     5341 aaccattata taatcttatt tgctaaaaca tgcccgtcaa gaaaaacacc gtgtttttgg
     5401 gcaattcgtg aaatattttt taacaatcgt acacaaaatt gttacatttg gattcaaatg
     5461 cttgttataa ctggaaaaaa ctgtcaagtg ccgttttctc aaatatgtaa attgattttt
     5521 aaaagtttag acacaggggc aatgaaaaaa gtttcaatta ctgttcataa tttttatatt
     5581 acttaataca gaaaggagtt tttatgggcg ttaatatttt ggacagaata tacaaagcct
     5641 cggaaatgag cggggatatc aaagatattg ttgtgtttac ggaaagtttt aaatgctacg
     5701 gaacaattgt aaaagaccac aaagacaatc ttaaagacat tttgacttta aaagatgcaa
     5761 ctatctgcca tcattttgat gagtgcagct gcaatataga aagcccaaag tatgaatggc
     5821 tcaacatcaa tgaagaaaaa atcattgcgt tcagcatact gggttatatg acctgcgaga
     5881 attaaattat tgcaacaaat ctaatacata tctttcggaa ttcataacgg tcttcataac
     5941 cttggccatg agttccatgg aaaactgtgc tttttttaag tcagtgattg ctgaaatata
     6001 atccgtatct tgaatatcac tcaaagatgc tgttgtagac attatatttg tcatctgttg
     6061 attaatcgca ccttccagtg aagattggac agcaccaatt tcccctcttt ttgagccgat
     6121 atcagaaagc attgaatctg cctgtgcaag agaagctgca gctgcctccg gcgtagagac
     6181 atcaaaattc aaagaatcaa gagcaatatt agggtcatat gatataattg aggtagaatc
     6241 cgtacccacc ataaaatccg taacaggagc ggggttcgga ttttcgggtg taaccgcgtt
     6301 tattgttggt ttcccgttga atgttgattg accaagggtt tgttttatct gctcaacatt
     6361 ctgattaatt tcttgttgta tcactgctcg ctgagaatca gaatatatcc cgtttgaggc
     6421 ttgtatgctc aactctctga tacgttgaag gctttcagaa acattcccca aagctgagtc
     6481 agccactgct gtaaagttgt accctgtttg tgcattttct atcgcttttt ttgcagagcg
     6541 aatcgtagta tccaggccgg ttgcaacgta tttatccgca ggattgacat aactatttat
     6601 gcccgatgca atactttcgg ccgctttttc aaacgtccgc tgagcctgca ccatgcctgt
     6661 ctgcgcagaa tatataccta ttggcattac cacactgagt gacacttttt aattcgcttt
     6721 cttacaaaat ttttattata tacgcacaat ctgctatagt ttttagtcta tccttattat
     6781 gcccttattt aaaaattttt aagcaaaaat ttttaatttt tttacaaata ttcatcacct
     6841 gataattttg taataaaatt aattaatata agacttttta aaggtgaatt tatggacagt
     6901 attaacaata acttacaaac ttttccgaga tttcatttta ttgcaatcgg cggaattgga
     6961 atgagcgggc tggcaaaata tttgcttgag cttggttgtg aagtttcagg ctctgatata
     7021 aaagaaagca aatacacaaa aaaagtggaa gcgttaggag caaaggtttt tataggacac
     7081 gatgcaaatt atattcagcc tgatatgatt gttgttgcgt ccactgcaat aaaagataac
     7141 aaccccgaaa aaataagagc aaaagagctt ggaatcgaag ttcttcaccg ctcggacgtt
     7201 ttaaaaatga tatccgaagg ccttggacga aaagatacag aaaaacaaca gttcatcggc
     7261 ttttctggca cacacggaaa aacaacaaca agcggattgt gctcatatgt tttggagaaa
     7321 gcaggatacg aaccctctta ctgtgtagga ggaatcattc ctgaccttga cacaaatgca
     7381 aaatccggaa acggaaaata ctttgtggca gagctggatg aatcagacgg aaccattgta
     7441 aaatatcaca caaacctgag cgtaataaac aatttagaag tagaccacgt tgatttttac
     7501 aaaaacggtt ttgatgacct tttaaaaact ttccgtaccc atattgataa ccgtgctgaa
     7561 ggaggcaagg tcattgttaa caaagactgc aacggcataa aaaaattgat tgcggcaaat
     7621 cctgacatta aatttattac ttttggtatt gaaagcggtg gtgtagacta tagcgcaaga
     7681 aacatgaaat tcacagaatt cggctcggag tttgatattt ttcacagagg cgaaaaaatc
     7741 atttctttaa aacttacaat accggggaaa cataacattt acaatgcact ggctgttctt
     7801 tctgcattga atgaagaagg cgtggattta gaaaaagtta agcctcattt tgaaaccttc
     7861 tcaggtatgg gcagaagatt ccaaaaggtg gcagaatttg acggaataag aatctttgat
     7921 gactatgcac accatcccac cgaaattaaa acaacactgg acagtgcaag gttgtgcaac
     7981 acaaacaggc ttgtagcaat atttcaaccg catagatttt cccgtttaaa aggattgtgg
     8041 gacgatttta caaaaagctt tactgctgtt gataagctga ttgttgttga tgtttattcc
     8101 gcatcggaag acgcgattga gggaatcaac tcaaaaacat ttgcacagag ttttcaaaac
     8161 gaagatgtta cctatgtagg cggaagtatg gaaaatgctg caagaaaaat ccttccgctt
     8221 ctcaaatccg gagacatggt aat
//
LOCUS       DABS01000011            9275 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_19638, whole genome shotgun sequence.
ACCESSION   DABS01000011 DABS01000000
VERSION     DABS01000011.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 9275)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 9275)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9275
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..228
                     /locus_tag="CPT85_00300"
     CDS             <1..228
                     /locus_tag="CPT85_00300"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase"
                     /protein_id="DAB27186.1"
                     /translation="FYRNAINIGLLLIECDTDKINAGDELEVDIKKGVVKNITQNTEI
                     TFAPLPDVMIKLLHDGGLIEHLKKHGDFDLV"
     gene            complement(299..667)
                     /locus_tag="CPT85_00305"
     CDS             complement(299..667)
                     /locus_tag="CPT85_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015869210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="DAB27187.1"
                     /translation="MIKAKNRKEQTRKRHIRVRTKISGTAEAPRLAVYRSTKHIYAQL
                     IDDVAKVTLCSASSIDKDLREKLGHGGNVEAAKVVGEAIAQKALKAGINECVFDRGGF
                     LYHGRVSALADAAREAGLNF"
     gene            complement(765..1310)
                     /locus_tag="CPT85_00310"
     CDS             complement(765..1310)
                     /locus_tag="CPT85_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015218384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="DAB27188.1"
                     /translation="MSRIGKKPVVIPXDGVEVKIDGQVVTAKGPLGTETVELREEVTV
                     KVENNEIIVDIKDHNDRKSRALWGLSRTLVNNAVEGVKHGFTKKLEIQGVGYRANMEG
                     SNLNLVLGYSHPVLVTPPEGIKISVEANTKITVTGSNKQMVGDVAAEIRGKRPPEVYK
                     GKGVRYEGEYVRRKAGKTGKK"
     assembly_gap    1273..1274
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1386..1772)
                     /locus_tag="CPT85_00315"
     CDS             complement(1386..1772)
                     /locus_tag="CPT85_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013908081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="DAB27189.1"
                     /translation="MYTDPIADMLTRIRNANIVSHEVVEMPSSKLKVELAKVLKEEGY
                     ITDYTEKEVGKFKVLSITLKYDETHKPVISNLKRISKTGLRVYSKAKDLPQVFGGLGI
                     AIISTSKGLMTDRKARKEKLGGEVIC"
     gene            complement(1927..2133)
                     /locus_tag="CPT85_00320"
     CDS             complement(1927..2133)
                     /locus_tag="CPT85_00320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007475795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="DAB27190.1"
                     /translation="MAKKSMIAKEQRRQLLVSKGKYPRVRLHNRCSICGRPHGFHRDF
                     GLCRICLRKMAHEGLLPGVVKASW"
     gene            complement(2201..2764)
                     /locus_tag="CPT85_00325"
     CDS             complement(2201..2764)
                     /locus_tag="CPT85_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012683991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="DAB27191.1"
                     /translation="MTTLTKDLKVRYEEEVKESLKSQFGYENVNQIPKLNKIVINMGV
                     GEACHNSKLAETIVKQLTKIAGQKAVITKAKQSISSFKLREGMPVGCMVTLRGERMYD
                     FLQKLICVVLPRIRDFRGISSKSFDGRGNYTLGLKEQTLFPEISYDEVDAVFGMNISI
                     ITTAKTDEEARALLTELGMPFKKKSQA"
     gene            complement(2870..3220)
                     /locus_tag="CPT85_00330"
     CDS             complement(2870..3220)
                     /locus_tag="CPT85_00330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008538867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="DAB27192.1"
                     /translation="MRNKKKTIEQHDLHVKTGDRVILTSGKDKGKIGNVKKIIASENK
                     VIVEGANMITKAQKPNPMAGIQGGLTKIEAPVDSSKVMVYCSSCEKATRIKHDIVDGK
                     KVRVCKKCGEQLDA"
     gene            complement(3235..3603)
                     /locus_tag="CPT85_00335"
     CDS             complement(3235..3603)
                     /locus_tag="CPT85_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005539259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="DAB27193.1"
                     /translation="MIQQETRLVVADNTGAKELLCIRVMGSSNKKFAHVGDVIVATVK
                     DATPNMAVKKSDVVKAVVVRTKADIKRADGSVIRFDENAAVIINKDGNPRGTRVFGPV
                     ARELRDKNFMKIISLAPEVI"
     gene            complement(3663..3908)
                     /locus_tag="CPT85_00340"
     CDS             complement(3663..3908)
                     /locus_tag="CPT85_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011430038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="DAB27194.1"
                     /translation="MPKKEKQGVVVSNKMDKTAVVKVAEYNKHPKYHKIIETHKNYKA
                     HDAENSCGEGDVVRIIESRPISGDKRWVVAEIVEKAR"
     gene            complement(3910..4104)
                     /locus_tag="CPT85_00345"
     CDS             complement(3910..4104)
                     /locus_tag="CPT85_00345"
                     /inference="COORDINATES: protein motif:HMM:PF00831.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="DAB27195.1"
                     /translation="MKLQELKEKSIDELNALIVDTKKQLLDLRMQKSLQKLENTAQIR
                     QLKTVVAQAKTLIKEKSEVK"
     gene            complement(4145..4564)
                     /locus_tag="CPT85_00350"
     CDS             complement(4145..4564)
                     /locus_tag="CPT85_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005842109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="DAB27196.1"
                     /translation="MLMPKKTKYRKKMKGRMKGHETRGTKLEFGNYGLIACDPAWITS
                     RQIEAARRAMTRNIKRGGNVWIKIFPDKPITAKPAETRMGKGKGNPEYWVAVVKPGRV
                     LFELEFSQRDVAIESLKLAAQKLPIKVKIIEKEAAEA"
     gene            complement(4598..5338)
                     /locus_tag="CPT85_00355"
                     /pseudo
     CDS             complement(4598..5338)
                     /locus_tag="CPT85_00355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012282477.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
     assembly_gap    4995..4996
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    5205..5206
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5379..5681)
                     /locus_tag="CPT85_00360"
     CDS             complement(5379..5681)
                     /locus_tag="CPT85_00360"
                     /inference="COORDINATES: protein motif:HMM:PF00237.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="DAB27197.1"
                     /translation="MQESMAKQTNISMPARKLRRVINELRGKSALEAAKILKFMPYFA
                     ARVVEKNLVAAIANANEKFGANAEDLKISEIFADEXREVNRELKAESTEDSKELLI"
     assembly_gap    5442..5443
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5685..5966)
                     /locus_tag="CPT85_00365"
     CDS             complement(5685..5966)
                     /locus_tag="CPT85_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002753908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="DAB27198.1"
                     /translation="MARSLKKGPFVQESLQKKIAKMNEAGEKKVIKTWSRASMIVPDM
                     LGHTIAVHNGKSHVPVYVTEQMVGHKLGEFAPTRLFRGHAGQDKTAKRK"
     gene            complement(5978..6811)
                     /locus_tag="CPT85_00370"
     CDS             complement(5978..6811)
                     /locus_tag="CPT85_00370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011100715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="DAB27199.1"
                     /translation="MGKKVINPTSPGQRGMIKDDFADITTSKPEKSLLKPIRKTAGRN
                     NTGRITCRHKGGGVKRAYRVIDFKREKFGVPGVVKTIEYDPNRNVRISLVFYADGEKR
                     YILTPQNLNVGDTIVSGPNADIMTGNALPLEMIPLGTMIHNVEMIPGRGAKLVRTAGA
                     AAQLMAKEGNYVTIKLPSSEMRMIRKECLATIGVLGNAEQKNMKIGKAGRKRYMGIRP
                     TVRGVTMNPCDHPHGGGEGKTGPGGHPKTPWGKPALGYKTRKSNKHSDKYIVRGRKRN
                     K"
     gene            complement(6869..7168)
                     /locus_tag="CPT85_00375"
     CDS             complement(6869..7168)
                     /locus_tag="CPT85_00375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016502395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="DAB27202.1"
                     /translation="MKNNTERLYDIIKRPIITEKSMEATTLQQYTFEVVKDATKVEIV
                     QAVELAFPGRKVKSVNTVYMPSKAKRVGYSAGRTQSGKKAIVTIEGEPIEELIGA"
     gene            complement(7177..7812)
                     /locus_tag="CPT85_00380"
     CDS             complement(7177..7812)
                     /locus_tag="CPT85_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006716337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="DAB27200.1"
                     /translation="MTKEVSILNTKGSAVGQIALDEKVFGVEPNLHVMHLALRRQLNN
                     GRAGSACTKTRAEVSGGGRKPWKQKGTGRARAGSLRSPLFAGGGVIFGPKPRDYGFAM
                     PQKARRLALKSALSARIDNTVLVKDFSEINEPKTKLMAETLKALKVEGKILIIADVKA
                     AENAYLELSARNLPNVRIILPSNLNVKDLLEADNVIITEAAINEITERLSK"
     gene            complement(7859..8533)
                     /locus_tag="CPT85_00385"
     CDS             complement(7859..8533)
                     /locus_tag="CPT85_00385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015118715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="DAB27203.1"
                     /translation="MTTNAKSAPSSNKTRLGVIGKKLGMTQVFDEQGLAIPVTVIKVD
                     PLTVTQVKTVDSDGYNAIQVGFEPAKEKHLTKAQIGHFAKNGLDNFRHLQEFRVENSS
                     EYKVGQQIDLSILENVEKVDVTGKSVGKGFQGTVKRWNFSRGPMGHGSKNHREPGSIG
                     AGTTPSRVIKGKRMAGNMGNERVTITKLKVVQVDKDSNLLLVKGSVPGPEGKMVTVIP
                     SRVKWN"
     gene            complement(8696..9013)
                     /locus_tag="CPT85_00390"
     CDS             complement(8696..9013)
                     /locus_tag="CPT85_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010467965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="DAB27201.1"
                     /translation="MSTAQRQRIRVCLKAYDHKLIDVSAEKIVETAKRTDAKVAGPIP
                     LPTKRRLYCVLRSPHVDKKSREHYEMRIHKRIIDIYDPTQQTTEELSRMDLPAGVDIE
                     VKL"
     assembly_gap    9024..9058
                     /estimated_length=35
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         2343 a         1858 c         1544 g         3487 t
ORIGIN      
        1 ttttacagaa atgcaatcaa catagggctt ttgcttatcg aatgtgacac tgacaaaatt
       61 aatgcaggtg atgagctcga ggttgatatc aaaaaaggtg ttgttaaaaa tatcacacaa
      121 aatacagaaa ttacctttgc gccgctgccg gatgttatga taaaacttct gcacgacggc
      181 ggtttgattg aacacctaaa aaaacacggt gattttgatt tggtttaaca aatacatata
      241 aaaaaagacc ttctttcttc aagaaggtct tttaatttat ttataagaat aaacaagatt
      301 agaagtttaa gccagcttct cttgctgcat ctgccaaagc agaaactcta ccgtggtata
      361 agaaaccgcc tctgtcaaat acacattcat tgatgcctgc ttttaaagct ttttgagcaa
      421 tagcttcacc aactactttt gcagcttcaa cgtttccgcc atgacccaat ttttctctca
      481 ggtctttatc gattgaagat gctgagcaaa gtgtaacttt tgcaacgtca tcaatcaatt
      541 gagcgtagat gtgttttgta cttctgtata cagccaatct tggagcttca gctgtaccgg
      601 agatttttgt tcttacacgg atgtgtcttt ttcttgtttg ttcttttctg ttttttgctt
      661 taatcatttt tctttccttt cacccagacc ttcttactac gaaatttgat tttattcaaa
      721 tattctataa gggtctttaa tggctaattt atcttattgt gctattattt cttacctgtt
      781 ttaccggctt tacgtcttac gtattcgcct tcgtatctaa caccttttcc tttgtatact
      841 tcaggaggac gtttgcctct gatttcagca gctacatcgc caaccatttg tttgttagaa
      901 cctgtaactg tgatttttgt gttagcttca actgaaattt tgattccttc tggaggagta
      961 accaaaacag ggtgagaata acctaaaacg aggttgaggt tagaaccttc catgttagct
     1021 ctgtagccaa caccctggat ttctaatttt tttgtaaagc catgtttaac accttcaaca
     1081 gcattgttaa ccaatgttct tgacaagccc cacaaagctc ttgattttct atcgttgtga
     1141 tctttaatat caacgataat ttcgttattt tcaactttaa ctgtaacttc ctcgcggagt
     1201 tcaactgttt ctgtacccaa aggtcctttt gcagttacaa cctgaccgtc gatttttact
     1261 tcaacgccgt cgnngggaat tacaacaggt tttttaccta tacgtgacat ctttttatct
     1321 ccaatttata ttattatctt acttaatttg tttaacaatc aaagattgct cggggtttac
     1381 catacctagc aaataacttc gccgccgagt ttttcttttc ttgcttttct gtcagtcata
     1441 agacctttgc ttgtagaaat gatagcaata cctaaaccgc caaatacctg cggaaggtct
     1501 tttgctttag aatatactct caaacctgtt ttagaaattc tttttaagtt agaaataacg
     1561 ggtttgtgtg tttcatcata tttcaatgtg attgaaagaa ctttgaattt tccaacttct
     1621 ttttctgtgt aatcagtgat gtaaccttct tctttcaaaa ctttagccaa ttcaacttta
     1681 agttttgatg aaggcatttc aacaacttca tgagaaacga tattagcgtt tctgattctt
     1741 gtcagcatat ctgctatagg atctgtatac atattttatt tcctttacta cttacttgaa
     1801 ctatcattta ttacttaatc tagtgtcgtc tttttcgctt cgagccttcg aagctcaaaa
     1861 ctcacttttt caagcggttc tcatatactc gaacctgagt caggcagtat agtaaagcaa
     1921 ttggtgttac cagcttgctt taactacacc gggtaataaa ccttcatgag ccatttttct
     1981 caagcagatt ctgcaaagac cgaagtctct gtggaaaccg tgaggacggc cgcatataga
     2041 acatctgttg tgaagtctta ctctagggta tttacctttt gatacgagta attgtcttct
     2101 ttgttcttta gctatcattg attttttagc cacgattttc tcctttttta tgcaatattt
     2161 tgcattaacc ttgaatttat atcaaatctt aaccgtaaga ttaagcttgt gatttctttt
     2221 taaacggcat accgagctct gttaacaatg ctcttgcttc ttcgtctgtt tttgcagttg
     2281 tgatgataga aatgttcata ccaaatactg catcaacttc gtcgtaagag atttcaggga
     2341 acaatgtttg ttctttcaaa cctaatgtgt agttgcctct gccatcaaaa cttttagaag
     2401 agatacctct aaagtcacgg attctgggga gaactacgca gataagtttt tgtaagaaat
     2461 catacattct ttcgccgcgt aatgtaacca tacaaccaac aggcatacct tctcttaatt
     2521 tgaaggatga aattgattgt tttgctttag taattacagc tttttgacct gcaatttttg
     2581 ttaattgttt aacaattgtt tcagccagtt tagagttgtg acaagcttca ccaacaccca
     2641 tattgataac aattttgttc aatttaggga tttggttaac gttttcataa ccaaactgag
     2701 atttcaaaga ttcttttact tcttcttcat atcttacttt taagtcttta gttaatgttg
     2761 tcatttttct ttccttttcg tagaatgtac cttcatttta gtacaaacat aatatttgtg
     2821 cacaaacaag gcacccatac ttgtctaatc taaagacgcc ttaaggtaat taggcgtcta
     2881 attgttcacc gcattttttg caaacgcgta ctttcttgcc atcaacaata tcgtgtttga
     2941 ttcttgttgc tttttcgcaa gatgagcagt aaaccataac tttggaagaa tcaacaggag
     3001 cttcaatttt tgtcaagccg ccttgaatac ctgccatagg gttaggtttt tgtgcttttg
     3061 tgatcatatt agcaccttca acaattactt tgttttctga tgcaatgatt tttttaacgt
     3121 tgccgatttt acctttatct ttacctgaag ttaagataac acggtcaccg gttttaacgt
     3181 gtaaatcatg ttgttctatt gtttttttct tatttctcat tgttagtttc cttattagat
     3241 aacttccgga gctaatgaaa taatcttcat gaagttttta tctcttaact ctctggcaac
     3301 aggtccgaat acacgagtac ctctggggtt gccgtctttg ttaataataa cagctgcgtt
     3361 ttcgtcaaat ctgattacag agccgtcagc acgtttgatg tcagctttag ttctaacaac
     3421 aacagcttta acaacgtcag attttttaac agccatatta ggtgtagcgt ctttaactgt
     3481 agctacaatt acgtcaccaa cgtgagcaaa ctttttgtta gagctgccca ttacgcggat
     3541 gcaaagaagt tcttttgcac ctgtgttgtc ggctacgact aatctggttt cttgttgtat
     3601 cattgtcttt tatcctttat ttcattttta tagaaattga tttactgatt ttatataaaa
     3661 gcttatcttg ctttttctac aatctcagca acgacccatc ttttgtcacc tgaaatcggt
     3721 ctagattcga tgattcttac cacatcgcct tcaccgcaag aattttcagc atcatgtgct
     3781 ttataatttt tgtgagtttc gatgattttg tggtatttag ggtgtttgtt gtattcagct
     3841 actttaacaa cagctgtttt atccattttg ttgcttacta caacgccttg tttttctttc
     3901 ttcggcatct tactttacct ctgacttttc tttaattagt gtcttagctt gagctacaac
     3961 agtttttaat tgacgaattt gagctgtgtt ttcaagtttt tgcaaagatt tttgcattct
     4021 caaatcaagc agctgctttt ttgtgtcaac aattaacgca ttaagctcat ctattgattt
     4081 ttctttaagt tcttgtaatt tcattgttat ttcctttaat tacgattggt aattatccgc
     4141 ttaattaagc ttcagcagct tctttttcaa taattttaac tttgatagga agcttttgag
     4201 cagccaattt aagtgattcg atagctacgt ctctttgaga gaattcaagt tcaaagagta
     4261 ctctgcccgg tttaacaaca gctacccagt attcagggtt acctttacct ttacccatac
     4321 gagtttcagc aggttttgca gtaataggtt tatccgggaa gattttaatc caaacattac
     4381 cgcctctttt gatgttacga gtcatcgcac gtcttgcggc ttctatttgt cttgatgtaa
     4441 tccaggcagg atcgcaagcg ataagaccgt agttaccaaa ctcgagtttt gttcctcttg
     4501 tttcgtggcc tttcattctg cctttcattt tcttacgata tttagttttt ttgggcatta
     4561 acattttagt gtcgctccta attattattt tgtgttatta ctctgcagat tcagaagctc
     4621 ttttgcttct tcttcttccg cctaattgtt tttcttcatg gtttccggct tttttagctt
     4681 tgatgttcat atcagctttt tcgccaggca ttaagtttcc tttgaaaatc caaactttta
     4741 cgccgatttt acccatgatt gtatcagctt cagcaaaacc gtagtctaca tcagcacgaa
     4801 gtgtttgaag aggaattctt ccttctttaa cccattcgct tctggcaatt tcagcaccgc
     4861 ccaaacgacc tgataccata attttgatac cttgtacgcc tgaacgcatt gttctttgaa
     4921 cagcctgttt cattgctctt ctgaatgcga tacgtttttc taattgaaga gcgatagatt
     4981 ctgaaactaa ttgannaatt gagcatcagc atcagttctg gctacttcaa ccacgtcaat
     5041 agaaactgtt ctgttaacga gttttgctac gtcagctctt aattcttcaa taccttgacc
     5101 gcctctgcct acaacgatac cgggtttagc tgtaacaacg gtaatattaa cgttttgagc
     5161 ttttctggcg attaatattt tagaaatacc agctgcgtat aatcnncttg atatattttc
     5221 ttaatttatc gtcttcttta acgaattcgg gataatcttt tctcttagcg tgccatgtgc
     5281 tttcccaagg ttcgattata cctactctga atccttttgg atgtgtcttt tgtcccaagg
     5341 tcagcctcct taattcttac tacttgctaa tttaactgtt aaatgagaag ttcttttgag
     5401 tcttctgtag attctgcctt gagctctcgg tttacctctc tnntttcatc agcgaaaatt
     5461 tctgaaattt taaggtcttc agcatttgca ccaaattttt cattagcgtt agcaattgct
     5521 gcaaccaagt ttttttcaac aactcttgct gcgaagtatg gcataaattt taagattttt
     5581 gctgcttcta atgcagactt gcctctcaac tcgttgatta ctctgcgcaa tttacgagcc
     5641 ggcatactta tattagtttg ttttgccatt gattcttgca tagtttactt ccttttagct
     5701 gttttatctt gacctgcatg gcctctgaat aacctagtag gtgcaaattc acctaattta
     5761 tgaccaacca tttgttctgt aacataaacc ggtacgtggc ttttgccgtt gtgaacagca
     5821 attgtgtgac ccaacatgtc aggtacaatc attgatgctc ttgaccaagt tttgattact
     5881 tttttctctc cagcttcgtt cattttagcg attttcttct gaagtgattc ttgtacaaat
     5941 ggaccttttt ttagcgaacg agccattcat tatctcctta cttattacgt tttctgcctc
     6001 taacaatata cttgtcagaa tgtttattag attttctagt tttgtaacca agagccggtt
     6061 tgccccatgg agttttcggg tgtccgccgg gacctgtttt accttcacca ccaccgtgag
     6121 ggtgatcgca agggttcatt gttacaccgc ggactgtagg tctgataccc atgtatcttt
     6181 tacgacctgc tttaccgatt ttcatgtttt tctgttcagc gttacctaaa acaccgattg
     6241 tagccaaaca ttcttttctg atcattctca tttctgagct cggtaatttg atagttacgt
     6301 agttgccttc tttagccatt aactgtgcag cagcacctgc tgttctgact aatttagcac
     6361 cgcgtcccgg tatcatttcc acgttgtgta tcattgtacc taacggaatc atttccaaag
     6421 gtaatgcatt accagtcata atatctgcgt taggacctga aacaatagtg tcacctacgt
     6481 ttaagttttg aggtgttaag atatatcttt tttcaccgtc agcgtagaac actaatgata
     6541 ttcttacgtt tctgttcgga tcgtactcga tagtttttac aacaccggga acaccgaatt
     6601 tttcacgttt gaagtcaata acacggtaag ctctttttac accgccgcct ttgtgacgac
     6661 atgtgattct acctgtatta tttcttcctg ctgtttttct tataggcttc aacaaggatt
     6721 tttcaggttt tgatgtagtg atatcagcga aatcatcttt tatcatacct ctttgtccag
     6781 gtgaagttgg atttataact tttttaccca ttttcttttg ctcctgtttc ttgggattac
     6841 tgcataacca tcggcattac agccaccgtt atgctcctat taattcttca atcggttcac
     6901 cttcgatagt gacgattgct tttttacctg attgcgttct acctgcgcta tagccaactc
     6961 tttttgcttt agaaggcata tacacagtgt ttacgctttt tacttttctg cccgggaaag
     7021 ccagttcgac agcttgaaca atttcaactt tagtagcgtc ttttacaact tcaaaagtgt
     7081 attgctgtaa agtagttgct tccatagact tttcagtgat gataggtctt ttaatgatgt
     7141 cgtacagtct ttctgtattg tttttcatgc tgctcattat ttagacaacc tttcagtaat
     7201 ttcatttatt gctgcttctg taataattac gttatcagct tctaacaagt cttttacgtt
     7261 caagttagaa ggtaaaataa ttcttacgtt cggtaaattt cttgcgctca gctcgaggta
     7321 agcattttct gctgctttaa catcagcgat gattaaaatt ttaccttcaa ctttaagagc
     7381 tttaagagtt tcagccatca acttagtttt aggttcgttg atttcagaga aatctttaac
     7441 caaaactgtg ttgtcgattc tagctgacaa agctgattta agagcgagtc ttcttgcttt
     7501 ttggggcatt gcaaaaccgt agtctctggg ttttggtcca aagataacgc cgccgcctgc
     7561 aaataatggt gaacgaagag aaccagctct tgctctacct gtaccttttt gtttccaggg
     7621 ttttctgccg cctccagata cttctgctct tgttttagtg caagcactgc ctgctctgcc
     7681 gttgtttaac tggcgtctca aggcaaggtg cattacatgc aagttaggtt caacgccgaa
     7741 gactttttcg tcaagagcga tttgtcctac tgcacttcct tttgtattta gtattgaaac
     7801 ttcttttgtc atttttcttt aacctcaatt aaattgttat tctcaagatt taaggaaact
     7861 agttccattt aactcttgaa gggattactg taaccatttt tccttccggt ccgggtactg
     7921 agcctttaac caaaagcaag ttgctgtctt tatcaacctg aacaactttt aatttagtaa
     7981 tagttactct ttcatttccc atgtttccgg ccatgcgttt acctttaatt acacggctgg
     8041 gtgtagtacc tgcaccgata gaaccgggtt ctctgtggtt tttagaaccg tggcccatag
     8101 gtcctcttga gaagttccat ctcttaacgg taccttggaa acctttacct actgatttac
     8161 cagttacgtc aactttttca acgttttcaa gaattgataa atcaatttgt tgtccaactt
     8221 tatattcaga tgagttttct actctgaatt cctgcaaatg tctgaagtta tcaaggccgt
     8281 ttttagcaaa gtgaccgatt tgagcttttg ttaagtgttt ttctttagcg ggctcaaaac
     8341 caacctgaat tgcattgtaa ccatcagagt caacagtttt aacttgagta actgttaacg
     8401 ggtcaacttt gataactgtt acaggaattg ccagtccttg ttcatcaaag acttgtgtca
     8461 ttcctaattt tttaccgatt acgcctaatc ttgtcttatt tgaagaaggc gcgcttttag
     8521 cgtttgtagt catatctacc tttctccttg tgagcgctac ttgtgttact tcgggcggtt
     8581 tgtccaagac cgcctcattt gtttttacgg actgtagatc acattaaatc ttattcaatt
     8641 gttaatgtgt tattagtttc ggatttctta accctggaat cgaagaagtt ataaattata
     8701 acttaacttc gatatcaaca cctgcaggta aatccattct gcttaactct tcagttgtct
     8761 gttgagtcgg gtcatagatg tcgataattc ttttgtgaat tctcatttca taatgttctc
     8821 ttgacttttt gtcaacgtga ggtgatctta aaacgcaata caatcttctt tttgtaggaa
     8881 gaggaatagg acctgcaacc ttagcatcag ttctttttgc tgtttcaaca attttttctg
     8941 ctgatacgtc aataagttta tgatcatatg cttttaagca aactctgatt ctttgtcttt
     9001 gagctgtact catttgttat actnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnat
     9061 ggcggctttt tattagaaag cgcacattta tgcacatagc cagctagtgt attaactacc
     9121 ttatattaaa caaaattgct cgtcaacagt atttttagct ttttttgaca aatttttaaa
     9181 attttacaaa agtttataat tgtacacaaa aaaatataat attttgcata aataaaataa
     9241 ttctttataa taaatttatg aattttaaag ttgag
//
LOCUS       DABS01000012            3500 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12162, whole genome shotgun sequence.
ACCESSION   DABS01000012 DABS01000000
VERSION     DABS01000012.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3500)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3500)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3500
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            42..1013
                     /gene="gpsA"
                     /locus_tag="CPT85_00395"
     CDS             42..1013
                     /gene="gpsA"
                     /locus_tag="CPT85_00395"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: protein motif:HMM:PRK00094.1-4"
                     /note="catalyzes the NAD(P)H-dependent reduction of
                     glycerol 3-phosphate to glycerone phosphate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="DAB27181.1"
                     /translation="MKLTVLGAGCWGLTLTWLLTDNFEKVCVWGRDTDISDDLRTNKH
                     ASKPLEIQLKDKVEVTSDLEKAVKDADIIXXXSGIRDVCKKLAQIGLKDNQVLVNTSK
                     GLELPSLMRMSEVMKQELPDANIAILSGPTLAKEVLMGCPTAASVACENKPXLQEKLT
                     VPSKFRLYTNDDVVGLELGGSLKNVIAIASGFADAMKLGDNCRGALLTRGMAEITRVS
                     VALGAKPSTLYGLSGMGDLIATCSSPMSRNFTVGSMLGHGKKINDILNELGSVAEGVK
                     TSKAVCELAKKLNIEVPISSAIYEAVYTDITPQELLDKLMNRKLKGE"
     assembly_gap    261..268
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    500..501
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1020..1310)
                     /locus_tag="CPT85_00400"
     CDS             complement(1020..1310)
                     /locus_tag="CPT85_00400"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27182.1"
                     /translation="MILEYSVNEAQVQPAWLKTLYDLVEELNCKCRTYIDESYNRSFK
                     QFTRTRTIEVYGSDTMLSWLKLRMERYSHFINEFNDKAEIQANMKNEGRDTG"
     gene            complement(1475..1891)
                     /locus_tag="CPT85_00405"
     CDS             complement(1475..1891)
                     /locus_tag="CPT85_00405"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27183.1"
                     /translation="MQKTNKAAYRETTEKEISTVLAIVKDSVNKLRDSGVNEDEVVKY
                     AQQEMKSVNTILNSIEPYYKEKIEQEFTFDQTVLKYDPIKNEPVAADIYTCNNDDCDG
                     MLIKTDRAKITVKKDLRTNKYKISTEYESDELDNIN"
     gene            complement(1903..2313)
                     /locus_tag="CPT85_00410"
     CDS             complement(1903..2313)
                     /locus_tag="CPT85_00410"
                     /inference="COORDINATES: protein motif:HMM:PF12844.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27184.1"
                     /translation="MITYFDVFLYLKVMYDIKIIFGSNVRKLRNKLNLSQDQFSEKIA
                     IGPTTLSVIESGKSFTTSDTINNICTTFNIPASYLFEIDSRYITNEYGNKKEIVDDIK
                     LLLNTLDYDKLKLTVNFIQMLGENTSVVSIKSKL"
     gene            complement(2418..>3500)
                     /locus_tag="CPT85_00415"
     CDS             complement(2418..>3500)
                     /locus_tag="CPT85_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018085219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsH"
                     /protein_id="DAB27185.1"
                     /translation="CIIFIDEIDAVGRQRGAGMGGGHDEREQTLNQLLVEMDGFDENT
                     NIIVIAATNRPDILDNALLRPGRFDRQIVVHRPDILGREQILNVHAKNKPLADDVDLK
                     VLAKRTPGFTGADLQNLLNEAALLAARSNKEKIEMPDLEEAIDKVIAGPEKKSRIISD
                     EEKENTAYHEVGHALLAKLLKDTDPLHKVSIIPRGMALGVTMTLPEKDHLTLKKSQLL
                     DRITMLLGGRVAEEIIYGPDSITTGAQNDLEKVTSTARNMVTTYGMSFKMGNMAYGKS
                     EEHVFMGRDFGHSRDYSEEIAADIDREVKRIVDERYNLAKELLLGNRDMLEVISKELL
                     ERETLDEEEFVAIMKRVEDSRQPHDM"
BASE COUNT          951 a          704 c          682 g         1153 t
ORIGIN      
        1 acactagatt atatgtattg ctagtataaa aggaagagtt tatgaaactt acggtattgg
       61 gagcaggctg ctggggtctt acactgacct ggcttttgac agacaatttt gaaaaagttt
      121 gtgtatgggg tagagataca gacataagtg acgacttgcg cacaaacaaa catgcgtcaa
      181 aaccgcttga aatacagtta aaagacaaag tggaagtaac ctctgacctt gaaaaagccg
      241 taaaagacgc tgatataatc nnnnnnnnat ccggcatcag agacgtgtgc aaaaaactgg
      301 cacaaatcgg cctaaaagac aatcaggtgc ttgttaacac atctaagggg cttgagcttc
      361 cttctttgat gagaatgagc gaagtaatga aacaagaact tccggatgct aatatagcaa
      421 tactttccgg acctactctg gcaaaagaag tattgatggg ctgccccaca gcagcttctg
      481 tagcttgcga aaacaaaccn ntattgcaag aaaaattgac tgttccgtca aaatttcgac
      541 tttacacaaa tgatgatgtt gtcggcttgg agcttggcgg aagcttaaaa aacgtaatag
      601 caattgcttc cggttttgca gacgctatga aactgggcga caactgccgc ggcgcacttt
      661 tgacccgcgg gatggcggag attacacgcg taagcgttgc gcttggcgca aaaccgtcca
      721 ctttgtacgg gctttccggc atgggagatt tgattgccac ctgctcaagc cccatgtcac
      781 gcaactttac ggtaggctct atgctcggcc atggcaaaaa aattaacgac atcttaaacg
      841 agctgggctc tgttgcagaa ggtgtaaaaa cttctaaagc cgtttgtgag ctcgccaaaa
      901 agctgaatat cgaagtgccg atttcttcag cgatttatga ggcagtgtac acggatatta
      961 ccccgcaaga gcttttggac aagctgatga acagaaaact caaaggcgaa taacaggttt
     1021 tagccggtgt cgcgtccttc gtttttcatg ttggcctgaa tctcggcctt gtcattaaac
     1081 tcgttgataa aatgggagta tctttccatt ctcaatttta gccacgacag cattgtgtca
     1141 gaaccataca cctcgattgt tctcgtcctt gtgaactgct tgaagcttct gttgtatgat
     1201 tcatcaatgt atgtgcggca tttgcagttg agctcttcaa caaggtcgta gagcgttttg
     1261 agccatgccg gctgcacctg tgcttcgttt acagaatact cgagaatcat ttttcttcct
     1321 tgactttctt cttaactgat acgctattta taacatgccc gcattttgca atgcctaagc
     1381 ataattatcg gatgatggat aggttttatt ctgtcacatg ctatgtatcg gcttatggaa
     1441 gaaaaacttt aagcttttta ttacttttgt aacattagtt aatattatcc agctcgtcag
     1501 attcatattc tgtagaaatt ttatatttat ttgtgcgtaa atcttttttt acggttattt
     1561 ttgccctgtc agttttaata agcattccgt cacagtcatc attgttgcaa gtataaatat
     1621 ctgcggcaac cggttcgttt tttatggggt catattttaa aaccgtctgg tcaaatgtaa
     1681 attcttgttc aattttctct ttgtaatagg gttctattga gttgagaatt gtgtttacgc
     1741 ttttcatttc ctgttgagca tatttgacaa cttcatcttc gttcacgccg gagtcgcgga
     1801 gtttgtttac agaatctttt acaatagcaa gaacagttga aatttctttt tccgtagttt
     1861 ctctgtaagc agctttatta gttttttgca tttggttaaa cctcataact ttgatttaat
     1921 tgaaactaca gaagtatttt cccccaacat ttgaataaag ttaacagtaa gcttcaattt
     1981 atcgtaatct aacgtgttaa gcagtaattt aatatcatct actatttctt ttttatttcc
     2041 atattcatta gttatgtatc gtgaatcaat ctcaaataaa tatgacgccg gtatattaaa
     2101 tgttgtacag atattattta tagtatcaga ggttgtaaag cttttacctg attctattac
     2161 acttaaagtt gtcgggccga ttgctatttt ttcactaaac tggtcctgac ttaaatttaa
     2221 tttatttctt agttttctaa cattactgcc aaatattatt tttatatcgt acataacttt
     2281 aagatacaga aaaacatcaa aataggtaat caactactat tggaatatcc agaataactt
     2341 taagaaacaa tacttattca cacaaataaa gagcaaacta atgtttgccc tttacacaaa
     2401 gttataataa tcaattatta catatcatgc ggctgtcttg aatcttcgac gcgtttcatg
     2461 attgcaacga attcctcttc gtctaaggtt tctctttcaa gcaattcttt tgaaatcacc
     2521 tcgagcatat cgcggttgcc cagaagaagt tcttttgcaa ggttgtatct ttcatccaca
     2581 atccttttaa cttctctgtc aatatcagct gcaatttctt cggagtaatc tcttgaatgg
     2641 ccgaagtctc tgcccataaa cacgtgctct tcgctcttgc cgtaggccat gttgcccatt
     2701 ttaaatgaca taccgtaagt tgttaccatg tttcttgctg ttgaagtaac tttctcaagg
     2761 tcattttgcg cacctgttgt aatagagtca gggccgtaga taatctcttc ggcaacacgt
     2821 ccgccaagaa gcattgtaat tctatctaaa agctgggact ttttcaaagt cagatggtct
     2881 ttttcaggca gtgtcattgt aacgccaaga gccatgcccc tcgggataat agacacttta
     2941 tgaagcgggt ctgtatcttt taacagtttt gcaagcaatg cgtgacctac ttcgtggtat
     3001 gctgtatttt ctttttcttc gtcagagatg attctgcttt tcttttcagg gccagcgatt
     3061 accttgtcta ttgcttcttc aaggtcaggc atttcaattt tttctttatt gcttcttgca
     3121 gcaagcagag ctgcttcgtt taaaaggttt tgcaaatcag caccggtaaa gccgggagtt
     3181 ctttttgcaa gcacttttaa atccacatcg tcagcgagcg gtttgttttt tgcatgcacg
     3241 ttaagaatct gctcacggcc gaggatatcg ggtctgtgta caacaatctg tctgtcaaaa
     3301 cggccgggtc ttaacagtgc gttatccaga atgtcgggtc tgtttgtagc agctataaca
     3361 ataatgtttg tattttcatc aaagccgtcc atttcaacaa gaagctggtt gagagtctgt
     3421 tctctttcat catggccgcc gcccatgcct gcgcctcttt gtctgccgac agcgtcaatt
     3481 tcgtctataa atataataca
//
LOCUS       DABS01000013            5979 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_696, whole genome shotgun sequence.
ACCESSION   DABS01000013 DABS01000000
VERSION     DABS01000013.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5979)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5979)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5979
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..318)
                     /locus_tag="CPT85_00420"
     CDS             complement(<1..318)
                     /locus_tag="CPT85_00420"
                     /inference="COORDINATES: protein motif:HMM:PF04074.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="DAB27179.1"
                     /translation="MIKDNLKNAESYHKLGEGFKKGFEFLKTADMKNLENGKYQIEGD
                     DIFVSVQDYTTKPQEQGKFEAHKKYADIQFIIKGEEKLGFGDVKNFKPTTFYDEKNDI
                     IFLE"
     gene            414..1118
                     /locus_tag="CPT85_00425"
     CDS             414..1118
                     /locus_tag="CPT85_00425"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27175.1"
                     /translation="MISPVTNRPKHNVFSSFQDTAHTKNVYSSLYYKRNHRVEESDVK
                     TKAKIAAGSIAATLVPMIYFAKKQNGLKKILDIFKIKYELKEVIALSSASIAGGALTG
                     IAVDKKTNRKQKINEGVFQFMNATVPTMLVGGAMELIKDNEKYKNSKPVKVAAIVTGL
                     IAGMPLAAFISNIINDPKDKEPDRKLTLKDSIINMDDALGALVVAKIPVVDKLHLEKI
                     MPAIFAWCGYRAGESN"
     gene            complement(1122..2699)
                     /locus_tag="CPT85_00430"
     CDS             complement(1122..2699)
                     /locus_tag="CPT85_00430"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27176.1"
                     /translation="MKKVSPKHSACKGFSLAEALMALLVVSLITIATIPVITKKKRSL
                     ENIPHGQWTCEIDEDGMHSSYSQDAPTPVVNADHCEFTPPPRAKNFIIKAVGGGGGGG
                     AGYSNLLMEALYPGQSKRIDFLANNQYDIVLVGGGGGGGGGNNERGGTRAHAGGSGAA
                     VSFTFKPTYNISYSISVGGGGGGGHGDDGKHSGGDGGNGGDTNFGNIVFAGGGTGGMA
                     IQYDGTGSACIARNLQATMFNKNCRGADWRNYSECVRNTGRGCSGKYSYSDPSGSLKI
                     TNVKSVNGQDGERTSAGMKTSYYSSVISEKMLMASNSYPYSTIGNTSYNLARMKENNM
                     GMSGGGGQGKNGGGTAGVGGYAAVKSDILSGGKAGQAARLMLYPAASINERLIIKLGK
                     GGSGGKNIFTSSTRSMTQPTDGTDTVVGNLFRAPGGEAGKNQAIEPDIASASYVAGED
                     GAVSGISANEVVSYGGRSVDGETAESSNAPGTTAAGGGGGGGGAKRSTAYGTSSYNHT
                     YSGDGADGGNGKVIIKW"
     gene            complement(2824..4638)
                     /locus_tag="CPT85_00435"
     CDS             complement(2824..4638)
                     /locus_tag="CPT85_00435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003372988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="DAB27180.1"
                     /translation="MDYKALANTTTQKNNTYTLKVLDKVNTPDDVKKLTTAQMKDLSQ
                     DIRYAIMKRSNTIGGHLGPDLGIVEATIAMHYVFNSPEDKIVFDVSHQCYPHKMLTGR
                     KYGFLNPEKYSAVSGYTNPEESSHDFFNVGHTSTGVSLATGLAKARDLKGEKYNVIAL
                     VGDGSLSGGEAYEGLNNAAVLGSNFIVVVNDNEMAIAENHGGLYKNLALLRKTNGKAQ
                     NNIFTAMGFDYYYVQDGNDVDSLIKTFKKVKNTTRPTVVHIHTLKGKGLEQAVKDKET
                     YHYIAAGALDKQKAKKENQKETYNSITSEYLLKKQKQNPLVFAISPATPAATGLTKEI
                     RQKMGQNYTDTGIAEEHAVAFASGAAKNGAKPVLEVMSSFIQRTYDQLSQDLALNNSP
                     ATILVFGGGISGADMTHLGIFDIPLISNIPNIVYLSPSTKEEYIAMLDWSLSQNSHPV
                     AIRVPSGDVVSTGHADKTDYSKLNKYKIEEKGKDVAIIAAGNFMPLGRQVKQELFKTL
                     KINATLINPKFLSGVDTELLQSLEKDHKVVITLESGLLDGGFGEKISRFYSDKNMKVL
                     NYGAAKEFTDREPVEKLYEKFRLTPQLITEDISNILKK"
     gene            4812..>5602
                     /locus_tag="CPT85_00440"
     CDS             4812..>5602
                     /locus_tag="CPT85_00440"
                     /inference="COORDINATES: protein motif:HMM:PF00892.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="DAB27177.1"
                     /translation="MNRKITGAINGAVAAASYGMNPLFALPMYAAGVGVNSVLFYRYA
                     IAVVLYGFWIKLFKKDSLRITLKEFFPLLFLGLFFSASSLTLFMAFHYIEAGIACTIL
                     FVYPLFVAVIMALFFKEKVTKTTIAAILLTFAGIALLYKGKPGSSLNIHGVAIVLASA
                     LLYALYIVGVKNIKPVKHMKPDKLSFYVMLFGLLLYIVNLKFCTELQIIDRPFLWLCT
                     FGLALFPTIISLETITISIKLIGSTTTAILGALEPLTAIFFGVMF"
     assembly_gap    5603..5626
                     /estimated_length=24
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5775..>5979
                     /locus_tag="CPT85_00445"
     CDS             5775..>5979
                     /locus_tag="CPT85_00445"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27178.1"
                     /translation="MLKVGLNSFQKIGSYITKHADSAVGNVFAKDVKLGSQITTDTFQ
                     KAGISTGSKVTKPISAVVSPKLTF"
BASE COUNT         1475 a         1167 c         1255 g         2058 t
ORIGIN      
        1 ttcaagaaaa attatgtcat ttttttcatc gtaaaaagtg gtaggtttaa aattttttac
       61 atcgccaaat ccgagttttt cttcgccttt tattatgaat tggatatcag catatttttt
      121 gtgtgcttca aattttcctt gttcttgcgg tttggtggtg taatcctgta cagatacaaa
      181 aatatcgtcc ccttcaattt gatatttccc attttcaaga tttttcatgt cagcggtttt
      241 taaaaattca aacccttttt taaacccctc acccaatttg tggtaagatt ctgcgttttt
      301 taaattatcc ttaatcataa taatcgcctt tcttaatttt tttttacata agattatagc
      361 aaatttttgt tatctgtggt tttataaaaa cagtttgtta agaaaaccgg accatgatat
      421 cacctgtaac taatagacca aaacataatg tattcagttc atttcaggat acggcacata
      481 caaaaaacgt ttattcgtcg ctttattaca aaagaaacca cagagtagag gaatcagacg
      541 ttaaaaccaa agcaaaaatt gcagccggct ccatagcggc tactttagtg ccgatgattt
      601 attttgccaa aaaacaaaac ggacttaaaa agattctgga tatttttaaa ataaaatatg
      661 agctcaaaga agtaattgcc ctgagttctg caagtattgc gggcggtgca ttgacaggta
      721 ttgcggtaga taaaaaaaca aaccgtaaac aaaaaatcaa cgaaggtgtt tttcaattta
      781 tgaacgcaac agtcccgaca atgctggttg gcggtgcaat ggagctgatt aaagacaatg
      841 aaaagtataa aaattcaaaa cctgtcaagg ttgcggctat tgtcacaggt ttgattgcag
      901 gtatgccttt ggcagcgttc atttcaaata ttattaacga ccctaaagac aaagaacctg
      961 acagaaaact tacgctaaaa gattctatta tcaacatgga tgatgcactc ggggctcttg
     1021 ttgtggccaa aattcctgtt gtggataaac tccatctgga aaaaattatg cctgcaatat
     1081 ttgcctggtg tggctataga gccggagaga gcaactgatt tttaccattt gataataact
     1141 tttccgttac cgccgtctgc tccgtcaccg gaatatgtat ggttgtagct tgatgtgccg
     1201 taggcagtac ttcttttggc tccgccgccg ccacctccgc caccggctgc tgtggttccg
     1261 ggtgcattgg aggattctgc tgtttctccg tctacgcttc tgcctccgta tgaaacaact
     1321 tcatttgcac tgatgcctga tacagcaccg tcttcgcctg ctacatatga agctgatgca
     1381 atatccggtt caatggcctg gtttttgcca gcttcaccgc cgggtgctct gaacaggttg
     1441 cccacaacgg tgtctgttcc gtcagtaggt tgtgtcattg aacgggttga tgatgtaaat
     1501 atgtttttac cgcctgagcc gccttttcca agctttatta tcagtctttc attaatactt
     1561 gctgcgggat aaagcataag acgtgctgct tgccctgctt tacctccgga taagatatca
     1621 ctttttacgg ctgcataacc accaacgccg gctgtgcctc cgccgttttt accctgtccg
     1681 ccgccgccag acatacccat attgttttct ttcattcttg caagattgta tgaggtgttg
     1741 ccaatagtgg aatatggata ggagtttgat gccatgagca ttttttcgct tattacagag
     1801 ctgtagtagg atgttttcat tccggcagaa gttctttcgc cgtcttgtcc gttaactgat
     1861 tttacgtttg tgatttttaa actgccgctc gggtcggaat agctgtattt tccgctgcag
     1921 ccgcgccctg tgttacgtac acattctgaa tagtttcgcc agtcagcacc tctgcagttt
     1981 ttattgaaca tggttgcttg cagatttctt gctatacaag cagagcctgt gccgtcgtat
     2041 tgaatagcca ttccgcctgt gccgcctccg gcaaagacaa tattaccaaa gtttgtatcg
     2101 cctccgttgc cgccgtcacc gccgctatgt tttccgtcat cgccatggcc tccgccgcca
     2161 cctccgccaa cgctgatgga gtaggaaata ttgtatgttg gtttgaatgt aaagcttaca
     2221 gcagcaccgc ttccgccggc atgggcacgg gttccgcctc tttcgttgtt gcctccgccg
     2281 ccaccgccgc ctcctccgac aaggacgatg tcatactggt tgtttgccaa aaagtctatt
     2341 ctcttgcttt ggccgggata taaggcttcc attaaaaggt tgctgtatcc ggctccaccg
     2401 cccccaccgc cgccgacagc tttgataata aagtttttag cccttggcgg gggtgtaaat
     2461 tcgcaatggt cggcattgac aacaggtgtc ggtgcgtctt gcgaatatga tgagtgcatt
     2521 ccatcttcat ctatttcaca ggtccattgg ccatgcggaa tgttttcaag gcttcttttc
     2581 ttttttgtaa tcacgggaat tgttgcaatt gtgattaagc ttacaaccaa aagagccatc
     2641 aaagcttctg ccagagaaaa acctttgcag gccgaatgtt tcggagagac ctttttcata
     2701 ttatttaaat cctttaacag tacttttctt tgtttttata cttaatttta tcatatttga
     2761 gtacacattt caatattgcg catataaata ttatatgcgc aattgaggta taatttttta
     2821 tttttatttt ttcaggatat ttgagatatc ttctgttatt aattgaggtg tgaggcggaa
     2881 tttttcgtag agtttttcaa ccggctctct gtccgtaaac tctttagctg cgccgtagtt
     2941 gagtactttc atatttttgt cggagtagaa tcttgagatt ttttcgccaa agcctccgtc
     3001 taaaagcccg ctttctagcg ttataactac tttatggtct ttttcgagag attgtaaaag
     3061 ctctgtatca accccgctaa ggaatttcgg gtttattaaa gtggcattga tttttagtgt
     3121 tttaaaaagc tcctgtttga cctggcggcc tagcggcata aagtttcctg ctgctataat
     3181 tgcaacatct ttgccttttt cttctatttt gtatttgttg agttttgaat agtctgtttt
     3241 atcagcgtgg ccggttgaaa caacatcgcc tgatgggact ctgattgcaa caggatggga
     3301 gttttgtgat agagaccaat caagcattgc gatgtattct tcttttgtgg aaggagaaag
     3361 gtacacaatg tttggaatat tgcttattag aggaatatca aatataccga ggtgtgtcat
     3421 atccgcgcct gatatgcctc cgccaaagac gaggattgtg gcgggcgagt tgttcaaagc
     3481 cagatcctgt gaaagctggt cataggttct ttgtataaaa gagctcatga cttcaagaac
     3541 gggttttgcg ccgtttttag ctgcgcctga tgcaaaagca actgcgtgtt cttctgcaat
     3601 gcctgtgtca gtataatttt gtcccatttt ttgtctgatt tcttttgtga gccccgttgc
     3661 tgccggagtt gcgggagaga tagcaaacac aagcgggttt tgtttttgtt ttttgagaag
     3721 atattcagag gttattgagt tgtatgtttc tttttggttt tctttttttg ctttttgttt
     3781 gtccagagcg cctgctgcaa tgtagtggta tgtttctttg tcttttactg cctgttcaag
     3841 ccctttgcct ttcagggtgt ggatatgtac aactgtcggg cgggttgtgt ttttaacttt
     3901 tttgaatgtt ttgattagag aatcaacatc attgccgtct tgtacatagt agtagtcaaa
     3961 gcccattgcc gtgaatatgt tgttttgagc tttgccattt gtttttctta acagcgcaag
     4021 atttttatag agcccgccgt ggttttcggc aatagccatt tcattgtcgt ttaccacaac
     4081 aataaaattg ctgccgagta cagctgcgtt gtttaagcct tcataggcct cgcctccgct
     4141 tagtgagccg tcgcccacaa gggcaatcac gttgtatttt tcgcctttga ggtctcttgc
     4201 ttttgcaagt ccggttgcaa ggctcacgcc tgtagaggtg tggcctacgt taaagaaatc
     4261 gtgcgagctt tcttcgggat ttgtgtagcc tgaaactgcg gagtattttt cagggtttaa
     4321 gaatccgtat tttcttcctg ttagcatttt gtgcggatag cactggtgtg atacatcaaa
     4381 aactattttg tcctcaggtg aattaaacac ataatgcatt gcaattgttg cttctacaat
     4441 ccccagatca ggcccgaggt ggccgcctat tgtgtttgac cttttcatga ttgcgtatct
     4501 tatgtcttgg gaaagatctt tcatctgtgc tgttgtaagt tttttcacgt cgtcgggtgt
     4561 gtttacttta tccagcactt tgagggtata ggtgttattt ttttgagtag ttgtatttgc
     4621 aagggcttta taatccattg atgcagccgt taacacggta agcacggcaa gtgatgctat
     4681 aaattgtttt ttcatctttt tctccttttt tattttttta ttgtactatc tgatagctgc
     4741 tatcagtcaa gccattgtga ttaattgatt ttataattcc tttaatatag attggttgag
     4801 aggtattagc tttgaacaga aaaataacag gtgcaataaa cggtgcggta gctgccgcaa
     4861 gctacgggat gaaccctctt tttgcactgc ctatgtatgc tgcgggagtg ggcgtgaatt
     4921 ctgtattgtt ttacagatat gctattgccg ttgttttgta cgggttctgg ataaagcttt
     4981 ttaaaaaaga ttctttaagg attacgctta aggaattttt tccgcttttg tttttggggc
     5041 ttttcttttc ggcatcgtct ttgaccttgt ttatggcatt tcattatata gaagcaggaa
     5101 ttgcgtgcac aattttgttt gtttatcctt tgtttgtggc tgtaataatg gcattgtttt
     5161 ttaaagaaaa agtcacaaaa acaacaatag ctgcaatttt gttgacgttt gcagggattg
     5221 cacttcttta taaaggcaag ccggggagta gtttgaatat tcatggtgta gccatagtgc
     5281 tggcttctgc acttttgtat gcactttata ttgtcggggt gaaaaatata aagcctgtaa
     5341 agcacatgaa gcctgacaag cttagttttt atgtaatgct ttttggtttg cttttgtata
     5401 ttgtaaacct gaaattttgc acagagcttc aaataataga caggcccttt ttgtggctgt
     5461 gcacattcgg gcttgcgctt tttcccacga ttatttcgct tgagacaatc actatttcaa
     5521 taaaactgat aggctcgacc acaacagcaa tactcggcgc gcttgaacct ttgacggcga
     5581 tattttttgg tgtaatgttt ttnnnnnnnn nnnnnnnnnn nnnnnncttt taactggtgt
     5641 gatactggtc attactagaa aacgagaaaa gaaagcaaaa gtataaattt gaaactcaaa
     5701 attttaaacg gcgcaatttt cgattacaaa ctatttttat ataaatatgg ttagatttgt
     5761 atgaaagtta ttttatgtta aaggttggtt taaattcttt tcaaaaaatt ggcagttata
     5821 tcacaaaaca cgctgattct gctgttggta atgtatttgc taaagatgta aaattgggct
     5881 ctcaaataac aacagatact ttccaaaagg caggaatttc taccggttca aaagtaacaa
     5941 aacctatttc agctgtagtt tctccaaaac ttacttttg
//
LOCUS       DABS01000014            3027 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_17948, whole genome shotgun sequence.
ACCESSION   DABS01000014 DABS01000000
VERSION     DABS01000014.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3027)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     assembly_gap    166..206
                     /estimated_length=41
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<207..450)
                     /locus_tag="CPT85_00450"
     CDS             complement(<207..450)
                     /locus_tag="CPT85_00450"
                     /inference="COORDINATES: protein motif:HMM:PF12844.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="DAB27172.1"
                     /translation="MKHDILGEQIKNARLHKGISQEQLAEMLNCSSRHIMAIENENKK
                     PGYWLLYNLIRTLNIPADTIFYPERHNMPHKMDIAID"
     gene            913..1290
                     /locus_tag="CPT85_00455"
     CDS             913..1290
                     /locus_tag="CPT85_00455"
                     /inference="COORDINATES: protein motif:HMM:PF08279.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="DAB27173.1"
                     /translation="MVYCSRKEGSNVRDKLCVSERRTKILEFLVQKKQSTRCELATEF
                     NVSTDTIDRDIVYLSGIAPVYTKQGNQGGVYILPEYRSYKNYLTDEEEECLYSLIKKS
                     ANDERRIICGIITKFTKNIITYK"
     assembly_gap    1618..1624
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1681..1848
                     /locus_tag="CPT85_00460"
     CDS             1681..1848
                     /locus_tag="CPT85_00460"
                     /inference="COORDINATES: protein motif:HMM:PF12728.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27174.1"
                     /translation="MDVIYLLEEYKDVINIKDLCEILNIGKNTAYKLLKNNDIPNRRL
                     GKKYIIPXLSI"
     assembly_gap    1834..1835
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1945..3027
                     /locus_tag="CPT85_00465"
                     /pseudo
     CDS             1945..3027
                     /locus_tag="CPT85_00465"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00589.20,HMM:PF14659.4"
                     /note="too many ambiguous residues; incomplete; missing
                     stop; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2522..2542
                     /estimated_length=21
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1058 a          421 c          614 g          863 t
ORIGIN      
        1 ttatatattg caaagcatgc ggctttagcg gataaagact gtgcgttctt gtatgaacaa
       61 ggcgtaaaag attgtgtaaa gttactcaaa agattaggag tgctttagaa ggaagcgcac
      121 tgatgtgcgc ttcttcattc ggacttgatt atttcctgaa cagcgnnnnn nnnnnnnnnn
      181 nnnnnnnnnn nnnnnnnnnn nnnnnncgtc aatggcaata tccattttat gtggcatgtt
      241 gtgtcgttcg ggataaaaaa tcgtatcagc aggaatgttt agagttcgta taagattata
      301 aagcaaccag tatccgggtt ttttattttc attttctatc gccataatat ggcgtgaact
      361 acaattcaac atttctgcaa gttgttcttg tgatatccct ttatgtagtc gggcattttt
      421 tatttgttcg cctaaaatat cgtgtttcat agcactgaaa attcacctcc acatatagtt
      481 tacaatgttt tctgtgaaat taacacgatt aaatgcttcg tgatagaacg aagttataat
      541 tcagaagcag cataaagctt catcaaaaaa aacgatggtt tgatgaggct tatttgattg
      601 taaaaactcc tcaagcttag tttcttggag gggttttatt gtttgcaaaa catatgggga
      661 atgatttatt aaaaaaatca atgtgcttat tttagctgat ttaaaactcg cacgtgaaca
      721 atcaaagcgt atatacacga atacggctga cacgattgaa aaaaatcgtg tttttttagt
      781 ctttgaatgt cttatgagag caccgccaat gaggtctttt tcaaaaaaag aggaaaagga
      841 ctaagataat gaaaaaaagt ttgaaacttt cagaattatt ttttcaaact cggaaaaatt
      901 tgcggagttt gagtggtata ctgctcccga aaggagggga gcaacgtgag ggataaatta
      961 tgtgtgagcg aaagaagaac aaaaatactc gaattccttg tccagaaaaa gcaatcaact
     1021 cgatgcgaat tggcgacaga atttaatgtt tctacagata caatcgacag agatatagtt
     1081 tatctcagtg gcattgctcc tgtttatacg aaacaaggta atcaaggtgg ggtttatata
     1141 ttgcctgaat acagaagcta taaaaactat cttacagatg aagaggaaga gtgtctttac
     1201 tctctgataa agaaatctgc taatgatgag cgaagaatca tttgtggcat cattacaaag
     1261 tttacaaaaa atattattac gtataaataa aatcctttca tgtacaaaga aagcacagaa
     1321 gacaacgctg tagcataata aagagcaaac ggatacattc caatatggaa gagccttata
     1381 cttgatacgc caagacactg catagaggta gtcgagcgat aaatatcact agtaaaaatc
     1441 aaattgcaag tttgaatggt caagacgtca tattggtata atgatacttc tgcctagccg
     1501 tagaccgcgc tttaagggcg tgtatgcaag catcgggggc agtccgggca gcgccgggaa
     1561 ggtgaaaatc ctatggagca attttgcaaa ttgccgttcg tgtagcttag atattttnnn
     1621 nnnncgtata aacttattgt acactgaaaa agggttaaaa tatttaattt gtgaacgaga
     1681 atggatgtga tatatttgtt ggaagagtat aaagatgtga taaatattaa agatttgtgc
     1741 gaaattctta acatcggtaa gaatacagcg tataaattat taaaaaacaa cgatataccc
     1801 aatcgtagac tgggcaagaa atatataatt cccnnattga gtatttaaaa ggagtacaac
     1861 tttaaaaaaa tatgttgata aagtaggctg ttgatgataa aataatattg tcagcagact
     1921 accgaagtta aggaggaatg acatatgaga ggtagtctac agaaaaaggg cggaaaatat
     1981 tacgcagtat tccgtgttaa taaaaagcaa aaatggataa atctctatat tgatgcaaag
     2041 aaaggtaata agcgagaagc cgaagcggct ttgacaagat tattagcgga gtataatgaa
     2101 aatcccaata tgtttgataa aattgacttt gtgggataca taaaaaagtg gcttaaagaa
     2161 gtgattacgc aagttgatat tgttacatac gaaggatata aaaccgatac ggaaaaccat
     2221 ttaatcccgt attttgaaca aaagaattta atgctacaag atgtgaagat agcagatatt
     2281 gaaaaatatt ataattataa ggcggttacg ggaaggttag atggtaaacc tggcggatta
     2341 tcatgtagaa ctctaaaaat tcacggtaca atattaagtt tgatttttaa gaaagccatt
     2401 cgtgaagaac taataagaga taatccatgt cagtacgcaa gattgcctaa aatgcagaaa
     2461 accactgtaa aaccttcatt ttacacagtg gaacagtgta ataggttgct tgaagtttct
     2521 annnnnnnnn nnnnnnnnnn nnacgggtta aggcggagcg aacttatggg gttacggtgg
     2581 gatgcagtcg actttgagaa taataccata gtaattcagc atacggttgt tctgcaaaat
     2641 caagtggttg ccaaagattc tactaaaaat aaaacaagta atcgcgtata tcctcttttg
     2701 gatgatgtga agccattgtt agaaaaactg ttagaaaaac aaaaaaagaa taaagatttt
     2761 tttaaaaatt gttattctga tagtggatat atttttgcaa aagaagatgg tacaccgtat
     2821 tatccaagtt atcctagcca cgagttgcaa aaagttttaa agaaaaatga gcttccgcac
     2881 attagatttc atgatttgcg tcatagttgt gcatcgatgc ttattctcag agggtggaat
     2941 atgaaagata tatcagaatg gcttggacat gcggatatta gcactacaat gaacatttac
     3001 ggtcatataa gcatggaaca taagaga
//
LOCUS       DABS01000015            6928 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_20939, whole genome shotgun sequence.
ACCESSION   DABS01000015 DABS01000000
VERSION     DABS01000015.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6928)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6928)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6928
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..432)
                     /locus_tag="CPT85_00470"
     CDS             complement(<1..432)
                     /locus_tag="CPT85_00470"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="DAB27168.1"
                     /translation="MNKVQFHSDLDRLIEILPPKITKCLSHETLDDVIELVLDLGRQP
                     EIRHADGNIDYLGEDTIVDEDIKYITDRVPEFTKDNRSGIAGTLHRISAIRNRQGKVV
                     GLTCRIGRVVTGTIACIKDFVVQNKSILFLGRPGVGKTTKLR"
     gene            complement(570..1538)
                     /locus_tag="CPT85_00475"
     CDS             complement(570..1538)
                     /locus_tag="CPT85_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020064996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epimerase"
                     /protein_id="DAB27169.1"
                     /translation="MNILITGGAGFIGSTLADRLLKDGHIVTVVDNFNDYYSKELKIK
                     NIQHNLSNEKYILYEEDIRNKAAIKNILKNNNIEVVIHIAALAGVRASIERPEEFIDV
                     NVNGTKIILDSMIECNIKKLVFASSSSVYGNCEAKIFSENITNLQQISPYAKTKYQCE
                     ELIKTYFQLYNLSAVCLRLFTVFGPRQRPDLAIRKFIEQIKKDEPIIMYGDGTMSRDY
                     TYIDDVINGFVSAIEYENSLFEIINIGSGSPVNLLKLVNIIEKCLDKKAIIKQVATQK
                     GDVQKTYADIDKAKSLLNYTPQKDFQKGIRTFIDWLETSNCFYKDM"
     gene            complement(1535..2977)
                     /locus_tag="CPT85_00480"
     CDS             complement(1535..2977)
                     /locus_tag="CPT85_00480"
                     /inference="COORDINATES: protein motif:HMM:PF01501.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27170.1"
                     /translation="MDSMTKNIIPICTITDENLTFTVPALFISIMETAKQSTFCKFYC
                     FITKNVSQKDREKIIAVQEMYKNCTVELIDMGEKYLDSINRHATVTNACLCKFAIAPV
                     LTQYDKILYLDTDIIVNEDLYEIYSTDLKDNYLAGVFNIYYYFYKKYLARLLNIPDLN
                     SYINAGVMLMNTKLIRQNNLTKILEENIGKFQGSVDQHIFNKVCYGKILNIAPKYNVT
                     LKYIEMYQQPEAKIFYTQKEIDETINAPAIIHYTGIRKPWNYEDLPLAGRWYSYYLKS
                     PYKDMPLKREXKLIAPNHKNLFSQMVGYFSHFQSQIYKILNTKFNVSDNYRDYKQLFK
                     YIKKQNSFPILIMLENLDDLVENRIVLKLIEKINSKFVVLSKKNGVLFDEFNTAKVKL
                     FVFDYIHKNILKTLKFYKIVILNNIESYATAGLLNENRYNFMWLLHDKNTIEDIVSQN
                     ESIQKIFNSTKNIIYSTEIDKIISVVGDKK"
     assembly_gap    2118..2119
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3019..6843)
                     /locus_tag="CPT85_00485"
     CDS             complement(3019..6843)
                     /locus_tag="CPT85_00485"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27171.1"
                     /translation="MSLINNKFLSLTNRLQLQAQAKILQQEQQEEKKLEQQKQSETSL
                     RSDESSTQTRAQSSSISDDLLLTYRGININHIETAQQKTVVTMDTLIPMLSNPQPVNI
                     APLEVKKEPKPATVSNSVINSSSIASQYNSGVVREGHRGLKTPSKLEAITDMARGDLN
                     AVADAIKSELKAQMGSDYDEKEVQRAIDAAIEQTLKVFSDNEERRRTEAGVNDNAFIF
                     KKKGGLFGIIGTYTYNVQALTNTFLSSYNEIATELFNDSQQEKAPGAIGKGVVVGSGV
                     YTSYKENEKKTSTSMIKFKAMNDVKEMARADMSALTDTIREQLKGELGSGYNDSLVRA
                     SINEAIERTINQFAQNEGRGVENGFEYKRKSFFRSTCSYNVGNLIDSFIVNFNEINVA
                     KFKNLSPVVNKEQKSEYTNEYINKYATQMTGEMLKANIDEAVKSAAGDNNVDSQMLYI
                     KADSPQQLQSIVAQKIDNTYALYQERFGSAFNNKSELNALFEDAKNSVLNSLNDKNKC
                     NLGEISYNLQDKFFENINTNLWNKYQAENAANRQPVTRSLFSTNTISSSSAATRGISS
                     TGNVSVSTANIKFQDGIIITDPKNYPATIDITINNSDGTNSTIKVEVSPDLLVYKPLK
                     ENNDEVTVVDPFEDWNSKPLQDRINEIANNLKQTFENLPDNVLKDFISEGTNISINPS
                     GDDIYSSKNLGLYSPAINEISLTYGPGHGTGFLNGINVNTLTHEIGHSIDVQEGVYKS
                     DSATTDMSSVYNDFLNSLPSSMRDNYALKNPKEFFAEYYAYKNLGTSDHFASLMNDIK
                     QQGLYDKVKPILEKIDKEFNGILKTDEALKQAQDKEQNGNFTNSELLDKIKKDWESGK
                     IYTSDLVGNNWSDINDTWNLNMQTKDILAEYYKHYYLNEPSDLINRLNNATGNTKYGD
                     SIKKLWDEAVNGSQYSDGIKQTCEAFKNSLKDSPNIYAPNPGGIPTVDQDPNEELFDD
                     TILDNSYDDDNIDEPKVDDNPFEFPSDNNEQTDDFEPDNSNNESNDIETGTDSSDSSS
                     DGSTNDSGVPDNVIPQPDSDNTPNDNSNENTPNNSLDFPDNAIVNDDGNIVIPSIKDD
                     DTSNNNNLTDTGREDIGRPDIVTDEEKQQIKEQYEEKYGNEYEVNVLHDGTVWLKPKE
                     DKDIETEDTNNNENNIQTDNNVQPDHSIDDTSDDTSIDVDDYFNDDGSFDTDDFIDDA
                     VDSGWDHWEYDDPDDIEDIWGDIQDAEESNDWDNFWDDMYDDDDSWDSSWDESWDDSW
                     DDSYDDDNWWDT"
BASE COUNT         1837 a         1266 c         1133 g         2690 t
ORIGIN      
        1 tcttaattta gttgtttttc ctacaccggg acgtcctaaa aacagtatac ttttattctg
       61 tacgacaaaa tcctttatgc aagctattgt tcctgttaca actctcccta ttctgcaggt
      121 aagccctaca acttttccct ggcggtttct gattgcactg attctgtgta atgtgcccgc
      181 tatacctgaa cggttatctt tagtaaactc ggggactctg tcggtaatat attttatgtc
      241 ttcatcgaca atggtatctt ctcccagata atctatatta ccgtctgcat gccttatttc
      301 aggctgtctg cctaaatcca ataccagctc aattacatcg tctaatgttt cgtggctgag
      361 acatttagta atcttcggtg gtagaatttc aattaaccta tccaggtcac tgtgaaattg
      421 cactttgttc atattattta atgccctttc gatcggctga tactcggctt ttgtctcctt
      481 gttacttttc ttgtttcata cttacatgta cattataaca tttttttgca tgcacggcat
      541 tatctaaacg tactactcac gtagtaaatt tacatatctt tataaaaaca attgctggtt
      601 tctaaccagt caataaaagt ccgtattcct ttttgaaaat ctttttgcgg ggtatagttt
      661 agcagactct tggctttatc aatatcagca tatgtttttt gtacatctcc tttttgtgtg
      721 gcaacctgtt taataattgc ttttttatcc agacattttt caattatatt gacaagtttt
      781 aaaaggttaa ctggtgaacc cgagccaata tttattattt caaacaaaga attttcatat
      841 tctattgcac tgacaaatcc gtttattacg tcatcaatat atgtgtaatc tctagacatt
      901 gttccatcac catacattat tattggttca tcttttttta tttgttcaat aaattttctt
      961 attgcaagat caggtcgctg tcttggacca aatacagtaa ataacctgag gcaaacggct
     1021 gacaaattgt ataattggaa atatgttttt attagttctt cgcattgata ttttgttttt
     1081 gcgtatggtg atatttgttg caggtttgtt atgttttcgc taaaaatttt ggcttcacaa
     1141 tttccatata ccgagctgga agaagcgaat acaagctttt ttatattgca ttcaatcatg
     1201 ctgtccagta taatttttgt gccgtttaca tttacatcaa taaactcttc aggtctttct
     1261 atagaagctc tgactccagc cagtgcagct atatgaataa caacctcgat attattattt
     1321 ttcaaaatat tttttatagc agccttattc ctgatgtctt cttcatacaa aatatatttt
     1381 tcgtttgaga gattatgctg tatgtttttt atctttaatt cttttgagta ataatcgtta
     1441 aaattgtcta caaccgttac tatgtgcccg tctttaagga gtctgtcagc aagtgttgag
     1501 ccgataaatc cggcaccgcc tgtaatcagg atgttcattt tttatcacca acaacagata
     1561 tgattttatc tatttcagta ctatatatga tattttttgt actgttaaag attttttgta
     1621 ttgattcatt ttgggaaaca atatcttcaa ttgtgttttt atcatgtaat aaccacataa
     1681 agttgtagcg attttcattt aataaaccgg ctgttgcata gctttcaatg ttattgagaa
     1741 ttacaatttt ataaaacttc agtgttttca aaatattttt gtgtatatag tcaaacacaa
     1801 acaattttac tttagctgtg ttaaactcgt cgaataaaac accatttttc ttgcttaata
     1861 caacaaattt tgaatttatt ttttcaatca gttttaaaac aattctgttt tctactaaat
     1921 cgtccaggtt ttcgagcata attaatatag gaaaagagtt ttgttttttt atatatttaa
     1981 aaagttgctt ataatcacga taattatcag aaacattgaa cttggtattt aatattttat
     2041 aaatttgtga ttgaaaatga gagaaatatc caaccatttg tgagaataaa tttttatgat
     2101 ttggagctat caattttnnt tctcgtttaa gaggcatatc tttataaggt gattttagat
     2161 agtatgaata ccatctgccg gcaagcggaa gatcctcata attccagggt tttcttatac
     2221 ctgtatagtg aataattgcc ggagcattta ttgtttcgtc gatttctttt tgcgtataaa
     2281 agatttttgc ttcaggttgt tgatacattt caatatattt taaagttaca ttatactttg
     2341 gtgcaatgtt caatattttt ccgtagcata ctttgttaaa aatatgctga tcaacagagc
     2401 cttgaaactt tccaatattt tcttcaagaa tttttgtaag attgttttgt cttatgagtt
     2461 ttgtgttcat aagcattaca ccggcattaa tgtatgaatt taagtcagga atattgagta
     2521 aacgtgccaa atatttttta taaaaataat aatatatgtt gaatacacct gctaaataat
     2581 tatcttttag gtctgtagaa taaatttcgt ataaatcttc atttacaatt atatctgtat
     2641 ccagataaag gattttatcg tattgcgtta aaacaggagc tattgcaaat ttgcacaggc
     2701 aggcatttgt tactgtggca tgtctgttga tactatcaag atatttttcg cccatatcaa
     2761 taagctctac tgtacagttt ttgtacattt cttgtactgc aatgattttt tctctatcct
     2821 tttgtgaaac atttttcgtt ataaagcaat agaacttaca aaaagtagat tgcttggctg
     2881 tttccataat tgatataaat aatgcaggga cagtaaatgt cagattttca tctgttattg
     2941 tacatattgg tattatattt tttgtcatgc tatccattca gaattattgt atcattattg
     3001 gttttgttta cacaattgtt atgtatccca ccaattgtca tcgtcatacg aatcatccca
     3061 tgagtcatcc cacgattcat cccatgaact atcccaggag tcatcgtcgt catacatgtc
     3121 gtcccagaaa ttatcccagt cattggattc ttctgcgtct tgtatatcgc cccagatgtc
     3181 ttcaatgtca tctggatcat catattccca atgatcccat ccggaatcta cagcatcatc
     3241 tataaaatca tctgtatcaa atgaaccgtc atcattaaaa taatcatcta catcaatgct
     3301 tgtatcgtca cttgtatcat caattgaatg gtctggttga acattgttgt ctgtctgtat
     3361 attgttctca ttattatttg tatcttctgt ctctatgtct ttatcttctt tgggttttaa
     3421 ccaaacagta ccgtcatgca gaacgttgac ttcatattca ttaccgtatt tttcttcata
     3481 ttgttctttt atttgttgct tttcttcatc cgtaacaatg tccggccggc ctatatcttc
     3541 acgtcctgtg tcagttaaat tgttattgtt tgatgtatca tcatctttga ttgaaggaat
     3601 aacaatattg ccatcatcgt tgactatcgc gttatcaggg aaatcaagac tgttgttagg
     3661 tgtgttttca ttactgttat cattcggtgt gttatcgctg tcaggttgag ggataacgtt
     3721 atccggcaca cctgagtcgt ttgttgaacc gtctgatgaa ctgtcagatg aatctgttcc
     3781 tgtttcaatg tcattgcttt cattgttgga attatccggt tcaaagtcat ctgtttgttc
     3841 attgttatct gatggaaatt caaatggatt atcatcaact ttgggttcat cgatgttgtc
     3901 atcatcataa gaattgtcta aaattgtgtc atcaaataat tcttcattgg ggtcttgatc
     3961 gactgttgga atgcctccag ggtttggtgc gtatatattg ggagaatctt ttaatgaatt
     4021 tttgaaagct tcacaagttt gtttgatgcc atcgctgtat tgagagccgt taacagcttc
     4081 atcccacagt tttttaattg aatcgccata ttttgtgttg cctgtagcgt tgttgagcct
     4141 gttaattaaa tcgcttggct cgttaagata atagtgtttg taatattctg caagaatatc
     4201 ttttgtctgc atatttaaat tccaggtgtc attgatatca ctccagttgt taccaacaag
     4261 atcacttgtg tatatttttc cgctttccca gtcttttttg attttatcaa gcagctctga
     4321 gttagtgaaa ttaccgtttt gttctttatc ttgagcttgt tttaaagctt catcggtttt
     4381 taatattccg ttaaattctt tatcaatttt ttcaagtatc ggttttactt tgtcatacaa
     4441 tccttgttgc ttaatatcat tcattaatga cgcaaagtga tcagaggttc caagattttt
     4501 gtatgcataa tattctgcaa aaaattcttt tggatttttt aatgcataat tgtcacgcat
     4561 tgacgaaggt aatgagttta agaaatcatt gtaaacagaa gacatgtctg tcgttgcaga
     4621 atctgacttg taaacacctt cttgtacgtc aattgagtgg ccgatttcat gggttaatgt
     4681 gtttacattt ataccattta aaaatcctgt gccgtgacca gggccgtatg ttaaagatat
     4741 ctcgtttatt gctggagaat acaagcccag gttcttgctt gagtatatgt catctcctga
     4801 cggatttatc gaaatatttg tgccctcact aataaaatct ttgagtacat tgtcgggtaa
     4861 gttttcgaat gtttgtttta agttattagc aatttcgtta attctgtcct gcaaaggttt
     4921 gctgttccag tcttcaaacg ggtcaacaac tgttacctca tcattgtttt ctttaagagg
     4981 tttgtaaacc aataaatccg gagatacttc tactttaata gttgaatttg tgccatcgga
     5041 attatttatc gtaatatcaa ttgttgcagg ataattcttt ggatcagtaa tgatgatacc
     5101 gtcttgaaat ttaatattag ctgtggaaac tgaaacattg cctgttgatg atattcctct
     5161 tgttgcagca gaagatgaag aaatagtatt tgttgaaaac agacttcttg tcactggttg
     5221 acgatttgca gcgttttcag cctggtattt attccacaaa tttgtgttga tgttttcaaa
     5281 aaacttatct tgcaagttat aggaaatttc ccctaagttg catttgtttt tgtcgtttaa
     5341 agaatttagc actgagtttt tggcatcttc aaaaagagca tttaattcag acttgttgtt
     5401 aaatgcagaa ccaaatcttt cttggtataa agcatatgtg ttatctatct tttgagcaac
     5461 aattgattgg agctgttgag gtgaatctgc ctttatgtat aacatctggg aatcaacatt
     5521 attatcacct gctgctgatt ttacagcttc gtcaatattt gccttgagca tttcaccagt
     5581 catttgagtt gcatatttgt tgatatattc atttgtatat tcactctttt gctctttgtt
     5641 gacaacaggt gagaggtttt taaacttcgc cacattaatc tcattgaaat taacaatgaa
     5701 tgaatcaata agattgccta cattgtacga acatgtggat ctgaaaaagg atttgcgctt
     5761 gtactcaaaa ccattctcta caccacgtcc ctcgttttgc gcaaattgat ttatcgtcct
     5821 ttctattgcc tcatttatcg atgctcttac cagcgaatca ttatacccgg agcctaattc
     5881 gccctttagc tgctccctta tcgtatccgt taaagcagac atgtcggccc ttgccatttc
     5941 ttttacatca ttcatcgcct taaactttat catgctcgtt gaagtcttct tctcgttttc
     6001 tttgtatgac gtatatactc cgctgcctac tacaactccc ttgcctatgg caccaggagc
     6061 tttctcttgc tgcgaatcat tgaataactc tgttgctatt tcgttgtaac ttgataaaaa
     6121 tgtattcgtt aatgcctgaa cattgtatgt gtatgtgcct ataatgccaa ataatccgcc
     6181 cttcttcttg aaaataaagg cattgtcatt gactccggcc tctgtccttc ttctttcttc
     6241 attgtctgaa aaaaccttga gagtctgctc tatcgctgcg tcaatagccc tttgtacttc
     6301 tttttcatcg taatcagatc ccatctgagc ttttaactca gactttatcg catctgctac
     6361 tgcattaaga tcacctctgg ccatgtctgt aatagcttca agctttgatg gcgtttttaa
     6421 ccccctgtga ccttctctaa ccacaccact gttgtattga gacgctattg aactcgaatt
     6481 aatcactgaa ttgcttactg ttgcgggctt tggctccttc ttcacctcta atggagcaat
     6541 attaacaggc tgtgggttgg aaagcattgg aatgagcgta tccatggtca caaccgtttt
     6601 ctgctgcgct gtctctatat gatttatgtt tatgcccctg taagtcaaaa gtaaatcatc
     6661 actaatgctt gaagactgcg ctcttgtctg cgtcgatgat tcatctgaac gtaaagatgt
     6721 ctcactttgc ttctgctgct caagtttttt ctcctcctgc tgctcttgct gcaatatctt
     6781 tgcctgcgcc tgcaattgca accggtttgt cagcgataaa aacttgttat ttattaaaga
     6841 catacgcact cctcttgctt agactgttac tttgtctatc ggtttctgcg ctgctttctt
     6901 tagctttttc tcttcttttt ttacattt
//
LOCUS       DABS01000016            4238 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_24794, whole genome shotgun sequence.
ACCESSION   DABS01000016 DABS01000000
VERSION     DABS01000016.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4238)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4238)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4238
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..851)
                     /locus_tag="CPT85_00490"
     CDS             complement(<1..851)
                     /locus_tag="CPT85_00490"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27163.1"
                     /translation="MCFTAIMIDAIFMGTSGLHGIKPYHAQISPSLKTQKNTNTSMPL
                     NKFLMFDTNRAMLNRSLISFKGYYGDSQPLKKLFWISTGRNDVYEDNWTKEHLYQVGN
                     KKWVNAHPAELLKRTPEQVLQSLCTLTKPNNQYPGIPPYIPSPNFGDKWGRQANYIEI
                     NPRVVAKYDGNRVTEGLLGVMKLLPAIPTSPNSFANCIVLSQLYPAIYGDGYKDAGSL
                     YCANLHAGISQTLTCDGLYGKMGADEQVKAFNDMAHMLGFKTGFRMPLSADQLKVQGG
                     RFNWYDH"
     gene            complement(871..1641)
                     /locus_tag="CPT85_00495"
     CDS             complement(871..1641)
                     /locus_tag="CPT85_00495"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27164.1"
                     /translation="MTDNVRFNPFTGQAFSSGEIKKLDTNNDGAISSDELWSNINFVS
                     GYQEQDTEGEVQIGDNFENSDKSKEESAIKTFGKGSLSIAEGVVDPALGVLKGGGNVV
                     AGIGGAVAETAKGAVNGSKSFWSGATSLVTNNVSGIWGGVSGFFSGMWGGFTNLFRGN
                     IFKGIGSIFGGAAKLIYKPIVGIGKGIFNFAKGCFGLVGNIGKGIVNGIGKAAKGVGK
                     AVKSIGNGVVKGVKAIGKGIANVGKAIGKGIKKIFKGW"
     gene            1797..3134
                     /locus_tag="CPT85_00500"
     CDS             1797..3134
                     /locus_tag="CPT85_00500"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02310.17,HMM:PF04055.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing radical SAM
                     protein"
                     /protein_id="DAB27165.1"
                     /translation="MKIALIMVKGNVYGFKNRSFIFKYMPDSLTLGTLYGIIKHSFPE
                     IEVEIYDETVETLKKENIKADLIGISAITPCINKAYAYADYFRQQGIPVFIGGVHATL
                     NPKEVKEHCDAVVKGLADETLPQLINDFKNGALKPFYEQNPDMSYSNLVLPERKIYED
                     KSFLGSELNMVYATFGCTNRCGFCVQPYVCGGYHQRPVDDVISEIKLIEDDYIEFIDP
                     NLAKDENYLKELCQKLIPLKKRWFAPLTISVCKNEELLDLMQQSGCEEILIGFESINQ
                     DSVKGINKGFNRVDDYKECIKQLHKRKIKITGSFVLGLDSDTKESLLSTADFVKEAHI
                     DYVRYTINTPYPGTEYYEKMKSQGRIVEDDWNLYDCQNCVFEPVNMTAQELESIFKTL
                     WQQTYTLKNIFVRLSYIKNPFTFVKDVVTNYIFGRIYINMVLKEKSFIKKIFF"
     gene            3159..3446
                     /locus_tag="CPT85_00505"
     CDS             3159..3446
                     /locus_tag="CPT85_00505"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27166.1"
                     /translation="MKKFMTVALLAAMVSMSAPAAFAGTHGVDRQVTGKSIAGGLASL
                     IIWPGIGQMVNDQKTDKVVTHALLGLTGIFRFWSCYDGIANRNGGVWQNRI"
     gene            3499..>4238
                     /locus_tag="CPT85_00510"
     CDS             3499..>4238
                     /locus_tag="CPT85_00510"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27167.1"
                     /translation="MKKLLMKKILIFFIITGFLFVQCPFSFAKDELPDLPALPDFDSV
                     MAPDGIDAFAPSSTPAQVAPKETVSTTTPAPSTVQKNNVSQTTKPVSKQPSTPPSTVV
                     TQPAVIPQKPVNTANNSYYKNNLKNSYVVPKGKKFKVRLQQTISDKTPEGTRISFVSV
                     YPETSTYITIPSGTIFKGKISDSHPPYITGNGGLIVINVDQMIYKGKAYEIDAKVSVA
                     NGKHIFLNNIKGKRQYFQSIPKAMKPGN"
BASE COUNT         1305 a          836 c          779 g         1318 t
ORIGIN      
        1 tcgtgatcat accagttgaa tcttccgcct tggaccttta actgatcagc agacaaaggc
       61 atacgaaaac cggttttaaa acctaacatg tgggccatgt cattaaacgc cttaacctgt
      121 tcgtcagcac ccatttttcc gtataacccg tcacaagtca aagtttggct gattcctgca
      181 tgaagatttg cgcaatagag tgaaccggca tctttataac catcaccata aatggccgga
      241 tacaattgtg acagtacaat acagttggca aaagagtttg gtgatgttgg tattgcaggg
      301 agcagtttca ttacacccag cagcccttcg gtaactctgt tgccgtcgta ttttgcaacc
      361 acacgagggt taatttcaat ataattcgcc tgtctgcccc atttgtcgcc aaaattcggt
      421 gacgggatat aaggcggaat ccccggatac tggttattag gcttggttaa agtgcatagt
      481 gattgaagca cctgttcggg agtccttttc aaaagttctg cagggtgggc atttacccat
      541 tttttgtttc ctacctgata taaatgctct tttgtccagt tgtcttcata aacgtcattt
      601 ctgcctgttg aaatccaaaa aagttttttt aacggttgac tgtctccgta gtatccttta
      661 aacgaaatca aagacctgtt gagcatggcc ctgtttgtat caaacatcaa aaatttgttt
      721 aaaggcatgc tcgtgtttgt gttcttttgt gtttttaaag acggtgaaat ctgcgcgtga
      781 taaggtttta tcccgtgcaa tcctgacgtc cccataaaaa ttgcatcaat cataatagca
      841 gtaaaacaca aacataaatt tttttgctat ctaccatcct ttaaatattt ttttaatacc
      901 tttacctatg gccttgccca cattggcaat gcctttgcct atagctttaa cgcctttaac
      961 aactccgttg cctattgatt taaccgcttt tccaacgcct ttggctgctt ttccgatacc
     1021 gttaactatg cctttgccaa tgttgcctac aaggccaaaa catccttttg caaagttgaa
     1081 tatgccttta cctattccga ctataggttt gtaaattaac tttgcggctc caccaaatat
     1141 actgcctata cctttaaaaa tatttcctct gaaaaggttt gtaaaaccgc cccacatacc
     1201 tgagaaaaag cctgacacgc cgccccaaat accggacaca ttatttgtaa caaggctggt
     1261 tgcgccactc caaaaacttt tggaaccgtt tacagcaccc tttgctgttt ctgcaactgc
     1321 tccgccaatg cctgccacaa catttccacc gccttttaaa acacccagcg ccggatcaac
     1381 aacaccttct gctatagaaa gcgaaccttt tccaaacgtt ttaattgcgc tttcctcttt
     1441 gcttttgtcg ctgttttcaa agttgtcacc gatttggact tcaccttctg tatcttgctc
     1501 ctgatagccg gaaacaaaat ttatgttgga ccacaattca tcagaagaga ttgccccgtc
     1561 attgttggtg tcgagttttt taatttctcc ggagctgaat gcctgtccgg taaaaggatt
     1621 aaatcttacg ttgtctgtca ttgttattgc cttttccctg ttaatatctt tatcggcaat
     1681 tttttttata agtttaggct ttttatatat aaattttttt acttttctaa aaaaccttga
     1741 tataattgaa ctttagagtg aaaagtcagg ttaatataag tttacaaaag gaagttatga
     1801 aaattgcatt gataatggta aaaggtaacg tgtatggttt caaaaaccgt tcttttatct
     1861 ttaaatatat gcctgattct cttactctgg ggactttgta cgggattatc aaacactctt
     1921 ttccggaaat agaagttgaa atttatgacg agactgtaga gactctcaaa aaagaaaata
     1981 taaaggctga tttaatcggt atttctgcca tcacaccttg tataaacaaa gcttatgcct
     2041 atgcggatta ttttcgccaa cagggaatcc ctgtgtttat tggcggtgtg cacgctactt
     2101 taaatcctaa ggaggtaaaa gaacactgcg acgctgttgt aaaagggctt gctgatgaaa
     2161 cactgcctca attgataaat gattttaaaa acggagcact gaagccgttt tatgaacaaa
     2221 atcctgatat gtcctattca aacctcgttt tgcccgagcg taaaatttat gaagacaaaa
     2281 gctttttagg gagtgagcta aatatggtct atgctacatt cggctgcaca aaccgctgcg
     2341 gtttttgtgt tcaaccctac gtttgcggag gctatcacca aaggcctgtt gatgatgtaa
     2401 tttcggaaat caagcttata gaagatgatt acatagagtt tattgaccct aatctggcta
     2461 aagatgaaaa ctatcttaag gaattatgcc aaaagcttat acctcttaaa aaaagatggt
     2521 ttgcgccttt gacaatttct gtttgtaaaa acgaagaact gcttgatttg atgcagcaat
     2581 caggctgtga agaaatactt ataggttttg aatctatcaa tcaagattct gtaaaaggta
     2641 ttaataaagg ttttaataga gttgatgact ataaagaatg cataaagcag ctgcataaaa
     2701 gaaaaataaa gattacaggc agttttgttc tggggcttga ttctgataca aaagaatccc
     2761 tgttgagcac agctgatttt gtaaaagaag cacatattga ctatgtccgc tacactataa
     2821 acacaccata tcccggaact gaatattatg aaaagatgaa atctcaaggc cgtattgtag
     2881 aggatgattg gaatctatac gactgccaaa attgcgtttt tgagcctgtt aatatgactg
     2941 ctcaagagtt ggagtctatc tttaaaacac tgtggcaaca gacatatact cttaagaata
     3001 tttttgtgag actttcttat ataaaaaatc cgtttacatt tgtaaaagat gtagtcacaa
     3061 actatatttt cggacgcatt tatattaata tggtgttaaa agaaaaaagc tttattaaaa
     3121 aaattttttt ctaaatggat aagttaggag gtaattatat gaaaaaattt atgactgttg
     3181 ctttgcttgc cgctatggta tcaatgtctg cacctgctgc atttgcagga acacacggtg
     3241 ttgacagaca ggttacagga aaatctattg caggtggttt ggcttcactg attatttggc
     3301 caggtatcgg acaaatggtt aatgatcaaa aaacagataa agttgttaca cacgctttgc
     3361 tgggtttaac aggtattttt agattctggt cttgctacga cggtattgca aaccgtaacg
     3421 gcggtgtatg gcaaaacaga atataatctc gtattaatta cggattcaaa taataaaaag
     3481 tcggtttaat attaaaatat gaaaaagctt ttgatgaaga agattttgat attttttata
     3541 ataaccggct ttttgtttgt gcaatgtcca ttttcttttg ccaaagatga gttgccggat
     3601 ttgcctgctc ttccggattt tgattctgta atggctcctg acggaataga tgcatttgca
     3661 ccgtcatcca caccggcaca ggttgcccca aaagaaactg tttccacaac aacaccagca
     3721 ccttccacag tgcaaaaaaa taatgtatcg caaacaacaa aacctgtctc caagcagcca
     3781 tcgacccctc cgtcaacagt tgtgacccag ccggctgtta ttccgcaaaa acctgttaac
     3841 acagccaaca acagttatta taaaaataat ttgaaaaact cttatgttgt tccaaaaggc
     3901 aaaaagttta aagtccgtct tcagcagaca atatctgata aaacacctga aggaacaaga
     3961 ataagctttg tcagtgttta tcctgaaaca tcaacttaca ttacaatacc atcaggaaca
     4021 atatttaaag gcaaaatttc agactctcat cctccttaca ttacaggcaa cggagggttg
     4081 atagttataa acgttgacca gatgatttat aaaggcaaag cctatgaaat agatgcaaaa
     4141 gtcagtgttg caaacggcaa acatatattt ttaaacaata taaaaggtaa gagacaatac
     4201 ttccagagca tacccaaggc aatgaagccc ggtaacag
//
LOCUS       DABS01000017            6660 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_6062, whole genome shotgun sequence.
ACCESSION   DABS01000017 DABS01000000
VERSION     DABS01000017.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6660)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6660)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6660
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            10..852
                     /locus_tag="CPT85_00515"
     CDS             10..852
                     /locus_tag="CPT85_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012874770.1"
                     /note="with OppABCD is involved in the transport of
                     oligopeptides; OppF and OppD are ATP-binding proteins;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter ATP-binding protein
                     OppF"
                     /protein_id="DAB27161.1"
                     /translation="MLGLVGESGCGKSTLGKSVLKLINPEGFVFFENENVLDLDTKQL
                     KNFRKKSQMIFQNPYSSLDPRMTIYRLLREPLVVHGIRDKQEINTRIHEIISLVGLNE
                     EDLKRYPHEFSGGQRQRIAIARALILKPQFLVADEPVSALDVSIQAQIITLLKELKDK
                     LNLTILFISHDLGVVKYLSDRIAVMYLGDIVELAKADELFKDPRHPYTQALISAVPSI
                     HKKQGEEIKLTGDLPSPVNPPKACKFHTRCNFAKDICSNIKIGEPKIIKISDSHYVKC
                     HLYD"
     gene            complement(856..1332)
                     /locus_tag="CPT85_00520"
     CDS             complement(856..1332)
                     /locus_tag="CPT85_00520"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27158.1"
                     /translation="MKKILSLLTALLITGIMTAANAATTPEQVLSFFNNYVSAANSYS
                     DTITSFYAPDAKIIRVVMKPDGTTATVTADTKQYFNQMRIGANLAKINKYKNFYTERK
                     ITKQGNDYKITCKRQPSTSDYKIPAHFVIGPDASGKLKIKEEMMYTKQQKFLKYAK"
     gene            complement(1474..2322)
                     /locus_tag="CPT85_00525"
     CDS             complement(1474..2322)
                     /locus_tag="CPT85_00525"
                     /inference="COORDINATES: protein motif:HMM:PF01435.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27159.1"
                     /translation="MKKLFGILLCFVLSAAGAFAASYNTSTNWFDTKNVSHLNTIGQN
                     IIKANKMPSTVTFKVTDNVDMNASNTNTTQYVYIYSGDLKYVENDNELAAVVAHEIGH
                     LVNGHYTKSSLLNGAISSFNPTTSSEKSAATVDLLKAISSSKVSKDNQKEADITAVDL
                     MMSAKYNPLALISVVYKSDIAKNGGLLDSDLSCEERIMNIYDYANYNYPEQVKANYKT
                     DSYQQALNLIYANLKIRNADAKKLAKAKKEQEKLKKDKLKRVRNMAKSTNPWSAAYSL
                     LQVSGN"
     gene            complement(2410..6246)
                     /locus_tag="CPT85_00530"
     CDS             complement(2410..6246)
                     /locus_tag="CPT85_00530"
                     /inference="COORDINATES: protein motif:HMM:TIGR02388"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta''"
                     /protein_id="DAB27160.1"
                     /translation="MDTLIQKHNKKTMEFINQIVNKKALNNLLAQVYLEYGGSKAANL
                     ANSLKNLGYKYATLSGTTISISDLSVPPVKKELLAEAEAEIEKSTNRYLKGEITEVER
                     YTKVIDTWSETTAKLTEQVVENFDRLNPVYMMAFSGARGNLSQVSQLVGMRGLMADAQ
                     GQIIDLPIKSNFKEGLSVTEYIISSYGARKGLVDTALKTADSGYLTRRLVDVAQDVII
                     REDDCHTTKFITMTDIKDGEKVVAPLKERLLGRTIFEDIKDADGNVVVPAGTTMDRED
                     IKKIDSIELHELKVRSALTCALEYGVCRKCYGWAMTTQKMVDVGEAIGIIAAQSIGEP
                     GTQLTMRTFHTGGVFKGSGAMKHIDADIDGEIISKLKTKELRTRHGDIVQVNIQEGDL
                     ELKGAKMTRKYHIPTGAKMYVVNGMQLKKGDPICEFEPASSGDGSRLTEKATKDINSD
                     LSGEVFFEDFVADEKKDRQGNVSRTANKNGIVWVLGGDVYNLPGGSKILVKDGQKIKT
                     GEKLAETHISSEHGGEVRVGENLVVEEVKFEGKKIKKIVQGKELTIVIASIAPSNATF
                     ETTKKEQFWTVDSTGEKYIVKSPADTTVENGMIIAELIDDEYSVQSSGEIRYMGIEVD
                     ENQIITKPGSVVFIPEEVHQINKDVTLKMVENNTFVTAGTEVVKDLYTHIDGIVEIKE
                     FNDIIHEVIVRPGEIHTLESIGDLKVEEGEVVEKGTVIAGKIKAKETSIVTILESEDD
                     SLAIDDLDEDIDVTSLDDDSIANKPVQILVRPVQQFDIHPKSVSIEFESTDEAISIVP
                     VTQLQYKDGARVRNLDGATLTRTSLVLQMQGYLSHLKGMVEMINENELKVVVLETLIV
                     RREVEGTNKASLQTELLVENGQVIAPKEPVAKTQVLAINDGVASIKSDKEDLRRLLLI
                     SDNVEQTIKLKTKPVVKEGDFVRRDGVISESGETTPTSGQVVAVAKDSVTVRIGRPYL
                     ISPGTMLQVDSGSLVLRGDMLANLVFERQKTGDIVQGLPRVEELLEGRKPKDSAILAE
                     FDAVAEIEIEDDVPRLYLVNENGRTEIKYPIDSNIIVQDKQKISVGQPLTSGPLNPHD
                     VIRLNGIEAAQQYLVDEVQRVYRSQGVEIADKHVEIIVRQMTKKVKVLESGDTKLLPG
                     ELVEIQALEIENQTVEEAGGAPATYEPVLLGITKASLNTESFISAASFQETTRILTEA
                     AVDGKKDLLRGLKENVIIGRLIPAGTGYYHLTHASEEKDKEAQRRAAQKNNARKPSAI
                     LEEIEGMFGAPDFTVE"
     gene            complement(6310..>6660)
                     /gene="rpoC1"
                     /locus_tag="CPT85_00535"
     CDS             complement(6310..>6660)
                     /gene="rpoC1"
                     /locus_tag="CPT85_00535"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_927223.1"
                     /note="DNA-dependent RNA polymerase catalyzes the
                     transcription of DNA into RNA using the four
                     ribonucleoside triphosphates as substrates; in
                     cyanobacteria the beta' subunit is composed of two
                     distinct genes that produce a gamma and beta' subunit;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit gamma"
                     /protein_id="DAB27162.1"
                     /translation="GDQMAVHVPLSIEAQTEARMLMLATNNILAPATGKPIITPTQDM
                     VLGMYYLTILKNHDGNDEIKGYFYSFADAISALEAKVIDLHDKIVVRDEKGERIETTV
                     GRIIFNETVRKALA"
BASE COUNT         1833 a         1296 c         1212 g         2319 t
ORIGIN      
        1 aaaggcgaaa ttctaggctt ggtgggagag tcaggctgcg gaaaatcaac actgggcaaa
       61 tctgttttaa aactgataaa tccggaaggt tttgtttttt ttgaaaacga aaatgtgctt
      121 gatttggaca caaagcaatt gaaaaatttt agaaaaaaat cgcaaatgat ttttcaaaac
      181 ccatactcga gcctcgaccc aagaatgaca atataccgtc ttttaagaga acctcttgtt
      241 gtgcacggaa taagagacaa acaggaaata aatacgagaa tccacgaaat aatcagtctt
      301 gtgggtttaa acgaagaaga cctaaaacgc tacccgcacg agttttccgg tgggcaaaga
      361 caaagaatag caattgcaag agctttgata ttaaaaccac aattcctcgt tgcagatgag
      421 cctgtttctg cgttggatgt gagtattcaa gcgcagatta ttactctttt aaaggagtta
      481 aaagacaagc tcaatttaac tattcttttt atatctcatg accttggtgt agtaaaatat
      541 ttatctgaca gaatagctgt tatgtatctg ggtgatattg tggaacttgc caaagctgat
      601 gagctgttta aagatccaag acacccttac acacaggctc ttatatcagc ggtaccatct
      661 atccacaaaa aacaaggaga agaaataaaa ctcacaggag accttccctc acctgttaac
      721 ccgccaaagg cttgcaaatt ccataccaga tgtaattttg caaaagacat ttgctctaac
      781 ataaaaatag gagagcctaa aataattaaa atttcagact ctcactatgt taaatgtcat
      841 ttatacgatt aatgtctact ttgcatattt caaaaacttt tgttgttttg tatacatcat
      901 ttcttctttg attttgagtt taccgcttgc atccggtcca attacaaaat gtgcagggat
      961 tttataatca cttgttgatg gttgtctttt gcaggtgatt ttataatcat tgccttgttt
     1021 tgttattttt ctttctgtgt agaaattttt gtatttgtta atttttgcaa ggttagcacc
     1081 gattctcatc tggttaaaat actgttttgt atcagcagta acagtagcag tggttccatc
     1141 cggtttcata acaaccctga taatctttgc atcaggtgca taaaatgatg taattgtatc
     1201 actgtatgaa tttgcagcgc taacgtaatt gttgaaaaag gacaatacct gttccggagt
     1261 agtagctgca tttgcggcgg tcattatacc tgtaatcagc aaagctgtta ataaactcaa
     1321 tatttttttc atttataaaa atctccttct ctctttttta tttaatagta cacatattat
     1381 ataacgaaaa caccgcctta aagttcaaat aaaattgaat attttgcaaa acaaaataag
     1441 atttcaaatt aatatacagt tggcaaaatt ttgttaattt ccggaaactt gaagtaagct
     1501 gtaagcagca ctccaggggt tagtggattt tgccatattt ctaactcttt ttagtttgtc
     1561 ttttttcaat ttttcctgtt ctttttttgc ttttgcaagt tttttagcat cagcatttct
     1621 tatctttaag ttcgcataaa tgagattaag cgcctgttga taagaatctg ttttataatt
     1681 tgctttaacc tgttcaggat aattatagtt tgcgtaatca tagatgttca taattctttc
     1741 ttcgcaagac aaatcagaat ccaacaagcc tccgtttttg gcaatatcgg atttataaac
     1801 cacagaaatt aaagcaagcg ggttatattt tgcgctcatc ataagatcaa ctgctgttat
     1861 atcagcttct ttttggttat ctttgcttac cttgcttgat gagattgcct tgagcaaatc
     1921 aactgttgca gcactttttt ctgatgatgt tgtggggttg aaagaagaaa tagcaccgtt
     1981 taacagtgat gattttgtat aatgtccgtt cacaaggtgg ccgatttcgt gtgcaaccac
     2041 agcagcaagt tcattgtcat tttcaacata ttttaaatca cctgaatata tgtaaacata
     2101 ttgcgttgta ttggtattag atgcattcat atctacatta tctgtcactt taaaggtaac
     2161 ggttgaaggc attttatttg ctttgataat attttggcca attgtattta agtggctcac
     2221 atttttggta tcaaaccagt ttgttgaggt attgtaagaa gcagcaaaag caccggctgc
     2281 actcaataca aaacacaata aaattccgaa taactttttc atatttatac tcccttcttt
     2341 tgcatgtata ttataacaaa taaaaaagcg gtaccgttaa gataccgctt tttttattaa
     2401 gaatattaat tattctacag taaagtcggg agcaccgaac ataccttcaa tttcttccaa
     2461 aattgcggaa ggttttctgg cattgttctt ttgtgctgct cttctttgag cttctttatc
     2521 tttttcttcg gaagcgtgag tcaagtggta gtaacctgta ccggcaggaa ttaatctacc
     2581 gatgattacg ttttctttaa gacctcttaa caagtctttt ttaccatcta cagctgcttc
     2641 tgtaaggatt cttgtagttt cctggaagga tgctgcagag ataaagcttt ctgtgttcaa
     2701 agaagcttta gtgataccga gcaatacagg ttcgtaagta gcgggagcgc cgccggcttc
     2761 ttcaactgtt tggttttcga tttcaagagc ttgaatttca accaattcac ccggcaagag
     2821 ttttgtatcg cctgattcaa gtactttaac tttcttagtc atctgacgaa caatgatttc
     2881 aacgtgttta tcagcaattt ctacaccttg agaacggtat actctttgta cttcatctac
     2941 aaggtattgt tgagcggctt cgatcccgtt caatctgata acgtcatgcg ggttcaaagg
     3001 tccgcttgtt aacggttgac ctacgctgat tttttgtttg tcttgaacga tgatgtttga
     3061 gtcaatcggg tatttgattt ctgttctgcc gttttcgtta acgaggtaca atctcggcac
     3121 gtcgtcttcg atttcgattt cagcaacagc atcaaattcg gcaagaatag cagaatcttt
     3181 aggtttacga ccttctaaca attcttctac tctcggaaga ccctgtacga tgtcacctgt
     3241 tttttgtctt tcaaatacaa ggttggctaa catatcaccg cgcagtacga gagaacctga
     3301 atcaacttgt aacatagtac cggggctgat taagtaagga cgaccgattc ttactgttac
     3361 agaatcttta gctactgcaa caacctgacc tgatgtcgga gtagtttctc cactttcaga
     3421 gataactccg tcacgtctta caaagtcgcc ttctttaaca accggtttag ttttcagttt
     3481 gattgtttgt tctacgttat cagagataag aagtaatctt ctcaagtctt ctttgtctga
     3541 tttaatgctt gcaacaccgt cattgatagc aagtacctga gtttttgcaa caggttcttt
     3601 aggagcaata acctgtccgt tttcaacaag cagttctgtt tgcaatgaag ctttatttgt
     3661 accttcaact tcacgtctta cgattaaagt ttccaataca acaactttaa gctcgttttc
     3721 gttgatcatt tcaaccatac ctttgaggtg gctcaaataa ccttgcattt gaagaacaag
     3781 acttgttctt gtcaatgttg caccgtcgag gtttcttact cttgcaccgt ctttatactg
     3841 caattgagta acaggaacga tgctgatcgc ttcatctgtg ctttcgaatt cgatgcttac
     3901 ggatttaggg tgaatatcaa actgctgaac aggtcttaca aggatttgta caggtttgtt
     3961 agcaattgaa tcatcatcaa gagaagttac atcgatatct tcgtcgaggt catcaatagc
     4021 aaggctatca tcttctgatt cgagaatagt tacgatagaa gtttctttag ctttaatttt
     4081 gcctgcgata acagtgcctt tttcaacaac ttcgccttct tccactttta agtcgccgat
     4141 tgattcaagt gtatgaattt cgccgggtct tactattact tcgtggataa tatcgttaaa
     4201 ttctttgatt tcaacaatac cgtcaatgtg tgtataaagg tctttaacaa cctctgtacc
     4261 tgcagtaaca aaagtattat tttcaaccat ttttaaagta acgtctttat taatctggtg
     4321 aacttcttca ggaataaata ctacagagcc gggttttgtg atgatttgat tttcatctac
     4381 ttcaataccc atgtatctga tttcgcctga agattgaacg gaatattcat cgtcgattaa
     4441 ctcagcaata atcattccgt tttctacagt tgtatcagca ggagatttaa caatgtattt
     4501 ttcgcctgta gaatcaactg tccagaattg ttctttttta gtagtttcaa aagttgcgtt
     4561 tgaaggagca atagaagcaa taacaattgt caattcttta ccttgaacaa tttttttgat
     4621 ctttttgcct tcaaatttaa cttcttcaac aacgaggttt tcaccaactc ttacctcacc
     4681 gccgtgttct gatgaaatat gagtttcagc gagtttttca cctgttttga ttttctggcc
     4741 gtctttaaca aggattttag aaccgccggg aaggttgtat acgtcaccgc ccaataccca
     4801 aacaataccg tttttgtttg cagttcttga aacgttgccc tgtctgtctt tcttttcgtc
     4861 agccacaaaa tcttcaaaga atacttcacc tgacaaatca gagttgatat cctttgtagc
     4921 tttttctgtc aaacggctgc cgtcacctga tgaagcaggt tcaaattcac aaataggatc
     4981 gccttttttg agctgcatac cattaaccac atacattttt gcacctgtcg ggatatggta
     5041 ttttctagtc attttagcgc cttttaattc gaggtcgcct tcttggatgt taacctgtac
     5101 gatatcaccg tgacgtgttc tcaattcttt tgtttttaat ttagaaatga tttcaccgtc
     5161 aatatcagcg tcgatgtgct tcatggcacc tgaacctttg aatacaccac cggtgtggaa
     5221 ggttctcatt gtaagctgtg taccgggttc accgattgat tgagctgcga taataccaat
     5281 agcttcacca acatcaacca ttttttgagt agtcattgcc cagccgtagc acttgcggca
     5341 tacgccgtat tcaagagcac atgtcaaagc tgaacgcact ttgagctcgt gaagctcgat
     5401 tgaatcgatt tttttgatat cttctctgtc cattgttgta ccggcaggaa ctacaacgtt
     5461 tccgtcagca tctttaatgt cttcaaaaat tgttcttccc aaaagtcttt cttttaacgg
     5521 agcaacaacc ttttcaccgt ctttgatgtc tgtcattgtg atgaattttg tagtatgaca
     5581 gtcatcttct ctgatgatta catcttgagc aacgtcaacc agacgtcttg tcaaataacc
     5641 tgagtcagct gttttcaacg ctgtatctac aagaccttta cgtgcaccgt aagaagaaat
     5701 gatgtattcg gtaactgaca agccttcttt aaagtttgat ttaatcggca agtcgatgat
     5761 ttggccttgt gcgtctgcca tcaagccacg cataccaacc agctgtgata cctgagaaag
     5821 gttacctctg gctccagaga atgccatcat atataccgga ttcaatctgt cgaagttttc
     5881 tactacctgt tctgtcaact tagctgttgt ttcagaccag gtgtcaataa cttttgtata
     5941 tctttctacc tctgtgattt cacctttaag gtagcggttt gtagactttt cgatttctgc
     6001 ttcagcttct gccaaaagct ctttttttac aggaggtacg ctcaaatcgc tgattgagat
     6061 tgttgtacct gataatgtag catatttata accgaggttt ttcaagctgt ttgcgaggtt
     6121 agctgctttt gagccgccgt actcgaggta aacttgagcg agaaggttat tcaatgcttt
     6181 tttgttcaca atctgattta tgaactccat tgttttttta ttatgttttt gaattaatgt
     6241 atccattctt tatacttccc tttagtttgt atttgtgtac tgccaaggtt ttgatttatt
     6301 tatcctgaac taggcaagag cttttcttac tgtttcattg aagatgattc ttccaacagt
     6361 agtttcgatt ctttcgcctt tttcatctct tacaacgatt ttatcgtgaa ggtctataac
     6421 tttagcttcc aaagcagaga ttgcatcggc aaagctgtag aagtagcctt taatttcatc
     6481 gttgccgtca tgatttttca agatagtcag gtaatacata cccaaaacca tatcctgtgt
     6541 aggagtgatg ataggtttac ctgtggcagg agcgaggatg ttgttagtag ctaacattaa
     6601 cattcttgct tctgtttgag cctcaattga cagaggtacg tgaacagcca tctggtcacc
//
LOCUS       DABS01000018            3092 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12484, whole genome shotgun sequence.
ACCESSION   DABS01000018 DABS01000000
VERSION     DABS01000018.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3092)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3092)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3092
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..1278
                     /locus_tag="CPT85_00540"
     CDS             <1..1278
                     /locus_tag="CPT85_00540"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27155.1"
                     /translation="NSSLQNGVSPKSDEKFFDARFDELEGLHIEKSDIKEQHQDKNKI
                     YTERKEDSYTITETKLKDDEPFECVVKRKNGTLKSTAKQLPDGNFETIVYREDGSVYS
                     KGLYKDFYEIFLLEEKKYDRKGTLTEKTYNDEQSQIINERYKNGKLYVVDKTDARRQG
                     VLNERTVYNSDGSVYINTKYAPDCTITESIKNKRTDDPDFDDFDKEAFDGIVKNDFEQ
                     GMSGTCYFVSTVQSFLNTTKGREIIKQSVSYHKENDVSTVKFLGAKKEYKFSSSDIKE
                     AMGRLSTGDPDFAALLLGYEKYRAQSKSKVVDSGFSTEVFKALCGKEGESNIIFGGIV
                     KTIDNKVLDNMSKNLHTGNYAITVHTFAETVDTEFSEEDKKAGLINSHAYSLKNVTDS
                     EVTVINPLTQKEITISREKFMESFITFAQVKLE"
     gene            complement(1270..2058)
                     /locus_tag="CPT85_00545"
     CDS             complement(1270..2058)
                     /locus_tag="CPT85_00545"
                     /inference="COORDINATES: protein motif:HMM:PF00588.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27156.1"
                     /translation="MAQGLAGRQMIEITSVQNEKIKETVKLQQKKYRNEKGLFLIEGH
                     KPIFEAFVEKAEICTVFTTQKYLEKFEFVQDKIILVTDAVMEKISTTDSAPEAVAIAK
                     QVNITLESIKQKTRIALLENTKDAGNLGTLLRSAAAFGIEAVVLCGDTIDRYNPKVVR
                     STVGALFKVPVVKATVNDVKKQFGSHNFIATVVNGDDVKKPDTIDYSKPFVIMLGSEA
                     DGLSHEAVMTANTKTTIPMAKNTESLNLSVAGSILFYLSSQTLL"
     gene            complement(2028..>3092)
                     /locus_tag="CPT85_00550"
     CDS             complement(2028..>3092)
                     /locus_tag="CPT85_00550"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00557.22,HMM:PF16189.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27157.1"
                     /translation="YFTNCRQYKTPFSSTFKAKMLVTKQKAQIYTNEKFDTTIGKHFE
                     ILPLKDFSNGLKNANKVIFNPSTINYRDFTLIKSKAQESPKDFIKEAKAIKNSAEIEH
                     FKKNFERTDNVVNKAFMLTQTPKNLTELDLSDAVEKEYLAQGANQLSFRTILAAGANS
                     SIIHYSHPSNNVKIKDGDFVLLDCGGHFEGGYSTDITRTFVKGKATTLQKKVYTTVMK
                     MFLNAYHHRITPRTTGFTLDKIARKIHAQSGLKDFNFNHGLGHGVGINVHENPPTISC
                     GALGKRILKENMVFTIEPGLYKAGFGGVRLENTVYLTKVNGELKIQSFSHVPFQEEAI
                     DYSLLNEQEKKWLKDWQAGK"
BASE COUNT          948 a          526 c          589 g         1029 t
ORIGIN      
        1 aactcttcat tacaaaacgg agtgtctccc aaaagtgatg aaaaattttt tgatgcccga
       61 tttgacgaac tggaagggct acatatagaa aaatcagaca tcaaagaaca acatcaggat
      121 aaaaataaaa tatatacgga aagaaaagaa gattcatata caattacaga aacgaaattg
      181 aaagatgatg agccttttga atgtgttgtt aaaaggaaaa acggaacctt aaaatctaca
      241 gcaaaacagc tgccggacgg caattttgaa actattgtct atcgtgagga cggaagcgtt
      301 tattccaaag gactttataa agatttttat gagatttttc ttctggaaga aaaaaaatat
      361 gacagaaagg gcacattaac agaaaaaacc tataatgacg aacagtctca aatcataaat
      421 gaacgttata aaaacgggaa attgtatgtt gtagacaaaa cagacgcaag acgtcagggc
      481 gtgttaaatg aaaggacggt ttataattct gacggaagtg tgtatataaa cacaaaatat
      541 gctcctgact gcacgataac tgaaagtatc aaaaataaaa gaaccgatga ccctgacttt
      601 gatgactttg ataaagaggc ttttgacggg attgtaaaaa acgattttga gcaaggtatg
      661 tctggaacat gctattttgt aagtactgtt cagagctttt taaatacaac aaaaggacgt
      721 gaaattataa aacagagtgt gtcttatcac aaagagaatg atgtatctac tgttaaattt
      781 ttaggtgcca aaaaagaata caagttttct tcttctgata ttaaagaagc aatgggccgg
      841 ctttcaacag gagatcctga ttttgctgcg cttcttctgg ggtatgaaaa ataccgtgca
      901 caaagcaaga gcaaagttgt agacagcggt ttttctacag aggtttttaa agcactttgc
      961 ggaaaagaag gagaatccaa tataatattt ggcgggattg tcaaaactat agataataaa
     1021 gtgctggata atatgtcaaa aaatttgcac accggaaatt atgccataac cgtacacacc
     1081 tttgctgaga cagttgatac ggaatttagt gaagaagata aaaaagcagg tcttatcaat
     1141 tctcatgctt attctcttaa aaacgttaca gacagcgaag ttacggttat aaatccttta
     1201 acacaaaagg aaattacaat aagcagagaa aagtttatgg aatcttttat tacctttgca
     1261 caggtcaaat tagagtaatg tttgtgagct taaataaaat aaaatagaac ctgccacgct
     1321 caagtttaag gattctgtat ttttcgccat ggggattgtt gtttttgtgt ttgctgtcat
     1381 tacggcttcg tgtgaaagcc cgtcggcttc agagccgagc atgattacga aaggttttga
     1441 ataatcgatt gtgtcaggct tttttacgtc atcaccgttg acaacagttg caatgaaatt
     1501 gtgtgagcca aactgttttt ttacatcatt aacagttgct tttacaaccg gaactttaaa
     1561 aagtgcaccc actgttgagc gtacaacttt cgggttgtat ctgtctattg tgtcaccgca
     1621 cagcacaact gcctcaatcc caaaagccgc tgcagaacga agcagtgtgc caaggtttcc
     1681 cgcatctttg gtgttttcaa gcaatgcaat tcttgttttt tgcttgattg attcaagggt
     1741 tatatttacc tgttttgcta ttgcaactgc ctcaggggcg ctgtcagttg tggagatttt
     1801 ttccataaca gcatctgtga cgaggataat tttgtcttga acaaattcaa atttttccag
     1861 gtatttttgc gttgtaaaaa ctgtacaaat ttcggctttt tcaacaaatg cttcaaaaat
     1921 aggtttatgg ccttctatta aaaacaaccc tttttcattt ctgtattttt tttgttgaag
     1981 tttaacagtt tcttttattt tttcattttg aacgcttgta atttctatca tttgcctgcc
     2041 tgccaatcct tgagccattt tttttcctgc tcgtttaaaa gtgagtaatc aatggcttct
     2101 tcctgaaacg gtacgtgcga aaacgattga atttttaatt cgccattaac ttttgtcaaa
     2161 taaaccgtat tttcgagcct tactcctcca aaaccggcct tgtacagacc cggttcgatt
     2221 gtgaaaacca tgttttcttt tagtattctt tttcccaaag ctccgcagga tattgttgga
     2281 gggttttcgt gtacattaat tcccactccg tggccgagcc cgtgattgaa attaaaatct
     2341 tttaaccctg attgtgcatg gatttttctt gcaatcttat ccagtgtaaa gcctgttgtt
     2401 cttggagtta tcctgtggtg atatgcattt aaaaacattt tcatcacggt agtgtacact
     2461 tttttctgga gggttgttgc tttaccttta acaaaagttc ttgtaatgtc tgttgaatat
     2521 ccaccctcaa agtgtccccc gcaatccagc agaacaaagt ctccgtcttt tattttgaca
     2581 ttgtttgacg ggtgggaata atgtataata gaagaatttg cacccgcagc cagtattgtt
     2641 ctaaagctca actggtttgc accttgtgcg aggtattctt tttctacagc gtctgacaaa
     2701 tccagctctg taaggttttt tggggtttgt gtaagcataa atgctttgtt tacaacatta
     2761 tctgttcttt caaaattctt tttaaaatgt tctatctctg cactgttttt tatggctttt
     2821 gcctctttta taaagtcttt aggtgattct tgtgcttttg attttataag cgtaaaatca
     2881 cgataattta ttgtgctcgg attaaaaatt accttgtttg cattttttaa tccatttgaa
     2941 aaatccttta atggcagaat ttcaaagtgt tttccaatag ttgtgtcaaa tttttcatta
     3001 gtataaattt gagccttttg cttggtaaca agcatttttg ccttaaatgt ggaagaaaaa
     3061 ggcgttttgt actgccggca gtttgtaaaa ta
//
LOCUS       DABS01000019            2512 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_5359, whole genome shotgun sequence.
ACCESSION   DABS01000019 DABS01000000
VERSION     DABS01000019.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..1581
                     /locus_tag="CPT85_00555"
     CDS             <1..1581
                     /locus_tag="CPT85_00555"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27153.1"
                     /translation="IDLKQQNAKLQWLLSRKLQPLQAIESFCEWGRCFQKETDSAFKE
                     LIKNHPHDSIYGCSVDNVHKENVMRFKKVSEASHAILNSIKRDLYNNSHLSIINLSNF
                     DLKGAFRIKTHNKLDKKYNAQLIGKSKGFPLKKLYDINQIPVTEDFTTIYEYLIDLKK
                     VKAFSSKKINEYDIQKQSFLKITEKSIENSNIKLEIKNGKIILTDKISGKVLRDFITI
                     IDRKDDGDSYNFGAVKGDKPLNLVITGSKIIENANVRSKLQINALLYKTPVKIVALLE
                     NQNDFIEFNIEWNNKTKNHILQVEFGLPEPCKEVFSDDLAGYIKREFDTDYDIYKKIP
                     APRGIELPLNTAPFQKCLWLQGIGVITEGLQEYEVFKNKLRLTLLRATGTISNPKNTT
                     RGTPAGPPLPTPDLQMLGHNSARFAVCFKNNIEACESNIEKFYDTALLCNADLSDCVF
                     FETGCDSVLVNTVKLNDNGDLIVRLLNKADSSNTLKFRSALKNIGLYFTNAMEEITDE
                     YKDTNIEANSFVTILLKK"
     gene            complement(1594..1667)
                     /locus_tag="CPT85_00560"
     tRNA            complement(1594..1667)
                     /locus_tag="CPT85_00560"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(1631..1633),aa:Pro,seq:cgg)
     gene            1980..>2512
                     /locus_tag="CPT85_00565"
     CDS             1980..>2512
                     /locus_tag="CPT85_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012159649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="DAB27154.1"
                     /translation="MKRCRWVDEKSEIYKNYHDNEWGVPKFDDRYLFEFLVLESFQAG
                     LSWITVLKKREAFKKAYDNFDVNKVANYNDKKIDELLNNSEIIRSKNKIISSINNAKI
                     FIEIQKEYGSFSNYIWGFTDNKVVKNTTGIFPVSTELSDKISKDLKKRGMKYMGTVIV
                     YSYLQAIGIVDDHEKDC"
BASE COUNT          924 a          388 c          436 g          764 t
ORIGIN      
        1 attgatttaa aacaacagaa tgcaaaactt caatggctgc tttctcgaaa acttcaacca
       61 ctacaggcga ttgagtcttt ttgcgagtgg ggccgctgtt ttcaaaaaga gacagattcc
      121 gcttttaaag agctaataaa aaatcatcct cacgacagta tttatggatg tagtgttgat
      181 aatgtgcaca aagaaaatgt gatgagattt aaaaaagtct cagaggcctc tcatgcgatt
      241 ttaaacagca ttaaaagaga tttgtataat aatagtcatc tttccataat aaacctctct
      301 aactttgatt taaaaggcgc atttcgaata aaaactcata acaaattaga taaaaaatac
      361 aatgcacaat taatcggaaa atcaaaaggc tttccactga aaaaactcta tgacataaat
      421 caaatacctg tgacagaaga ttttacaaca atatatgagt atctgattga tttgaaaaag
      481 gtaaaagctt tttcttctaa aaaaataaat gaatatgata ttcaaaaaca atccttctta
      541 aaaataaccg aaaaatctat tgaaaacagt aatattaaac ttgaaattaa aaacggaaaa
      601 atcattctca cagacaaaat atccggtaaa gttttgagag attttattac aattattgat
      661 agaaaagatg atggagacag ttataatttt ggtgcagtta aaggtgataa acctctaaac
      721 cttgtgataa caggttctaa aattatagaa aatgcaaatg tgcgctcaaa attgcaaata
      781 aatgctcttc tttacaaaac accggtgaaa atagttgctc tgcttgagaa tcaaaacgat
      841 tttattgaat tcaatattga gtggaacaat aaaactaaaa accatatttt gcaggtggaa
      901 tttggattgc cagagccttg taaagaggtc ttttctgatg atttggctgg ttatataaaa
      961 agagaatttg atacggatta tgatatttat aaaaaaattc cggccccaag aggtattgaa
     1021 cttcctttaa atactgcacc ttttcaaaaa tgtttatggc ttcagggcat aggagttata
     1081 acagaggggc tgcaagaata tgaggtgttt aaaaacaaat tgcggttaac gcttcttcgt
     1141 gcaacaggta caatctcaaa tccgaaaaac actaccagag gtacaccggc cggtccgcca
     1201 cttcctacac ctgatttaca aatgctcggg cataatagtg caaggtttgc agtttgtttt
     1261 aaaaataata ttgaagcgtg cgagtcgaat atagaaaaat tttatgatac ggctttattg
     1321 tgcaatgctg atttgagtga ctgtgtattt tttgagacag gatgtgattc ggtcttggtt
     1381 aataccgtta aattaaatga taatggggat ttaattgtaa ggcttttgaa taaagctgac
     1441 agttcgaata cgttaaaatt ccgttcagct ttaaaaaaca tcggtcttta ttttacaaac
     1501 gcaatggaag aaattacaga cgaatataaa gatacaaata ttgaagcaaa ttcgtttgtt
     1561 acgattttat tgaaaaaata atgaaataaa gaatcgggat gacaagattc gaacttgcga
     1621 cccccgcgac ccgaacacgg tgcgctacca aactgcgcta catcccgact ttttattaac
     1681 ttttcaattg tagcgcacct acggtgctac ctctcacaaa acgtgacatt tagtcacctt
     1741 ttgttcggca gagtcaaact gcgctacatc ccgactttta ttaagttttc aaattttatc
     1801 gagcgcagtt tggtatattt ctatacggca cacagaaact tcgtttctga cttagcctac
     1861 ctccatttgt aacgatactc aatcgttcca aacggagtcc ttgctacatc ccgactttta
     1921 ttaagttttc aaattataat ataattttag cataaaatat ttaattacaa gaggtgatta
     1981 tgaaaagatg ccgctgggta gatgaaaaat ctgaaattta taaaaactac catgacaatg
     2041 aatggggagt accaaaattt gatgacagat atctgtttga attccttgtg ctggaatctt
     2101 ttcaagcagg attgtcctgg attactgtac taaaaaaaag agaagctttc aaaaaggctt
     2161 acgacaattt tgatgtaaat aaagtcgcta attacaatga taaaaaaatt gatgagttat
     2221 taaataattc tgaaattata agaagtaaaa ataaaataat ttcttcaata aacaatgcaa
     2281 aaatctttat tgaaatacaa aaagaatatg gaagtttttc aaactatatc tggggtttta
     2341 ctgacaataa ggttgtaaaa aatactacgg gaatatttcc tgtcagcaca gaattgtctg
     2401 ataaaatttc caaagattta aaaaaacgag gaatgaaata tatgggtact gtgattgtgt
     2461 attcgtacct tcaagcaatc gggattgttg atgatcatga aaaagattgc tt
//
LOCUS       DABS01000020           14886 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_7428, whole genome shotgun sequence.
ACCESSION   DABS01000020 DABS01000000
VERSION     DABS01000020.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 14886)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 14886)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14886
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            27..461
                     /locus_tag="CPT85_00570"
     CDS             27..461
                     /locus_tag="CPT85_00570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006790177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27152.1"
                     /translation="MISKNTQGTTVKVVSGFMKPIAGPITSPFGYRMHPIFKRQIYHS
                     GIDIGGINGGKIRASNSGKVLYAGWYGGYGKVVIIDHGVINGQPITTLYAHMSGYVVS
                     PGQNVLKGQVVGYEGSTGYSTGPHCHFEVRVNGKPQNPLNYI"
     gene            479..1519
                     /locus_tag="CPT85_00575"
     CDS             479..1519
                     /locus_tag="CPT85_00575"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27137.1"
                     /translation="MKNKLFITLAIIMAMSAGLSVSYAAETLDVPQNTGIEQNADNDK
                     KQDSVKSDEQKQEDEKISDKNKADDKXANDSDKEDKPRKFFSKAEKKQKKKESAYEDG
                     PSTDVLVDSETIEYFPERHEFEAVGNAKVTFPSENSTLLADKIIFNHDTNFIKGYGDV
                     VLIKEGQKVNGDYIQVNLNEDNAMMTHPVLNHMAIKIRAKNATVNDAQTEALDGIVTF
                     NDKTSYQFVSRPIMGFDKPMMDEVIPKNFYFKEKYDNKWRLKAKTIIIDSYKDRDIAT
                     LKNADIYIKDTKLGSAGKMKLYTDKEQQYIETNMLELGSLRNLGAFISXYCTANAKRF
                     YIKNRPCCYIQK"
     assembly_gap    689..690
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1452..1453
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1527..2519
                     /locus_tag="CPT85_00580"
                     /pseudo
     CDS             1527..2519
                     /locus_tag="CPT85_00580"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2399..2439
                     /estimated_length=41
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2588..3451
                     /locus_tag="CPT85_00585"
     CDS             2588..3451
                     /locus_tag="CPT85_00585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015171338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit beta"
                     /protein_id="DAB27138.1"
                     /translation="MTLKDWFETRKEEQQAARPIDPKIDDNIGKLWVKCFNCNAQLPR
                     KELEHHMMVCPECGYHFRINARTRIEQVFDVGTFNEYYENISPSDPLEFFDTESYKDR
                     QAKAKEKTNLNDAVITGTGKVEGEEIACAIMDFEYMGGSMGSVVGEKVTRIIELALEK
                     KLPVVTITASGGARMQESALSLMQMAKTSCAVAKLNEAKLLYINILTDPTYGGVTASF
                     GTIGDIIIAEQGARIGFAGRRVIEQTIRQKLPADFQTAEYLMKHGQLDMICKRSELKE
                     TLAKILRLHRH"
     gene            3484..4437
                     /locus_tag="CPT85_00590"
     CDS             3484..4437
                     /locus_tag="CPT85_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005981110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="DAB27139.1"
                     /translation="MKLDFEKPITKIEQKIEELKKMSEESGMDLSKEIEVFEQQSHEY
                     KKELYENLKPVQKLQIARHPNRPNFLDYINLMTTDFVEMHGDREGTDDRAIIGGVAKI
                     GDKPVMIVGTVKGKSTKENLEYNFGMPQPEGYRKALRLFEHANRFGLPIVTLIDTPGA
                     YPGIKAEEHGQGIAIAVNLKEMAKLDVPVIAVITGEGCSGGALGLAVANKVLVLEHAY
                     YTVISPEGCASILWRDAAKASDAADALKITGPDLLKFNIIDGVVKEPLGGAHYDYEAM
                     GEELKKEILNALDEYKNMSAQQLKDDRYNKFRRMGVFGTAQ"
     gene            4434..5345
                     /gene="prmA"
                     /locus_tag="CPT85_00595"
     CDS             4434..5345
                     /gene="prmA"
                     /locus_tag="CPT85_00595"
                     /inference="COORDINATES: protein motif:HMM:PF06325.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="DAB27140.1"
                     /translation="MKDYFEISVKINPAVIEIVTEIFFDRFECEGVVQAEEKYKDLEL
                     IETTNNVAKGYVLCEEEDFSPSEIQKIFTHAKEELKKEGFTDEELGEWTISAKKIINQ
                     DWSQKWKEHWKPTKASEHVIICPSWEECTRKKDDILITLDPGSAFGTGTHATTQLCIQ
                     AIEKYLKKGDEVADIGTGSGILAITAIKFGASHAVAIDNDPLVIDVAKDNAQMNNVFN
                     KIDFSHATADMLSEQYDFVCANILHNVLAEIMGDLKNIMKPASYMVLSGILDEKKQVV
                     LDAVEKHGLKVIEILHQEQWTAIIVQK"
     gene            5388..6947
                     /locus_tag="CPT85_00600"
     CDS             5388..6947
                     /locus_tag="CPT85_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014062918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase"
                     /protein_id="DAB27141.1"
                     /translation="MVSQVITATVVGIDSYKILVEVDLVQSIPSVVIVGLPDTAVSEA
                     KERVRTAIKNSGFVFPNQKVIINLAPADIKKEGTNYDLPIAIGILARDGIVDEEKIKD
                     TAFLGELSLDGSLRAVNGILPITAGLRELGIKQVVVPQDNAKEAALIPDIKVLSAKNL
                     AQVAAHFGTEEHYADNSGEKELEVCEVYIDDYLNEYTTTHYEYDFKDIKGQLKAKKAL
                     EIAAAGGHNILMTGPPGSGKTLLSKSFASILPPLELEEAIELTKIYSVSGLLQPDNPL
                     VNKRPFRVVHHTASAVGIIGGGSNPKPGEITLAHKGVLFLDEIVEFPRSVLEVLRQPL
                     XGEVVISRAQTSVKFPADFMLLGAMNPCPCGYLGDSQKQCTCSEFQIQRYRSRLSGPL
                     LDRIDIQIDVPRLSSDELLNKNFKSECSADIRKRVIKARQIQVERYKNHPILTNSQLN
                     AELIKVFCKLDDQSENLLKNAISRFNLSGRSYDRILKLARTIADLENSANIESAHVAQ
                     ALQYRNFVDNA"
     assembly_gap    6390..6391
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(6952..7776)
                     /locus_tag="CPT85_00605"
     CDS             complement(6952..7776)
                     /locus_tag="CPT85_00605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013908005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="DAB27142.1"
                     /translation="MTTIKAVKLNNFEIGGDKLSILAGPCAIENKDVLFKVAENLKKI
                     TQELDINYVFKSSFDKANRSSINSFRGPGMEKGLELLAQVKKEFDLPIVTDIHTPDQA
                     APVAEVADILQIPAFLCRQTDLLVAAAKTGKIVNIKKGQFLAPAQMKPLAKKVSDSGN
                     DRILFTDRGTSFGYNNLVVDMRGIPIMQEMGIPVVFDATHSVQLPGGAGECSSGERKY
                     VSTLAKAAMAAGAKALFFEVHPDPDHALCDGPNMLSIEMAKETFKICKDIFELVKE"
     gene            7896..8966
                     /locus_tag="CPT85_00610"
     CDS             7896..8966
                     /locus_tag="CPT85_00610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017325003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pili twitching motility protein PilT"
                     /protein_id="DAB27143.1"
                     /translation="MLIEELLEDAVGKGASDIHISANLPPVFRIDGKLIRTNMEALTA
                     ENVETLVFPILNNEQRRKLEQEWELDLSYGIHGLGRFRVNVYKNNGTYAAAFRTINTQ
                     VPSFETLGLPPVVKKITERPRGLILVTGPTGSGKSTTLASMIDHINETRNEHILTIED
                     PVEFVHKSKKSVVHQRELGQDTRSFANALKSALREDPDIILVGEMRDLDTISLAITAA
                     ETGHLVMGTLHTSSASQTIDRIIDVFPQGQQQQIRIMLSNSLCAVFSQTLLPKLSENG
                     EKKGRVMAQEIMVVNGAIANLIREGKTSQMYSAIQTGAQHGMQTLETALANLYKKGLI
                     SAEDALVKSSRPDELKRLINIA"
     gene            complement(8953..9627)
                     /locus_tag="CPT85_00615"
     CDS             complement(8953..9627)
                     /locus_tag="CPT85_00615"
                     /inference="COORDINATES: protein motif:HMM:PF00413.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27144.1"
                     /translation="MVKRALGEWEKISGGKVKFKIVQTLNESQVNLDWKRVDRKALGH
                     CYFHFDNAGRLYSAEVQIGLSDGILHQQYQDENEVYHTILHEIGHALGLGHSPYDSDI
                     MYTPHKYGVVSLSNRDALSLQWLYRLPLGISVTELAQKHGIASNDIDYIIASISNAGK
                     SKEFENVKNSIRIPKKDLMSEQDKLAEMKKYNLGLQNIQIPSNVQEYIKKNIVLNKDK
                     KSPKQY"
     assembly_gap    9719..9720
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(9888..11165)
                     /gene="rseP"
                     /locus_tag="CPT85_00620"
     CDS             complement(9888..11165)
                     /gene="rseP"
                     /locus_tag="CPT85_00620"
                     /inference="COORDINATES: protein motif:HMM:TIGR00054"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="DAB27145.1"
                     /translation="MNIIIMILLISFLILVHELGHLLTALALGFKVTRFGFGLPVGPT
                     LFKAKIKDIEVVVHALLLGGYVSFPDDEENTELPKDSKEFFHNQPIWKRAIVLSAGVA
                     ANMLCAIALVMVTAAVTHKLPTDRAIVYVKNINQAQGASVNDSGLQKGDIILKINGSN
                     IIQPFQTNIYAKASKKFDGYVSTKAYYANLKKLQDKNPDIKDAYSPITKGEKINLIAA
                     TDEAPMHLSAAALMGIEKIKNDDIKLNSEQKELRNSLEGKSEYNANGLVSLSDLAKAL
                     SDTRKPMVFTVKRKVNGKDEILTLKPIYSNEEGLIGIERDGERVLIHTDSPAKIVTGS
                     LQYTWINTKYTLIGLEKLLTGQIPVKELRGIVAATKMGGDMIEQTGILNGILLTAIIS
                     INLAVMNLLPIPALXRWRAFDVFDYRKIQRQTA"
     assembly_gap    9947..9948
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            11265..11930
                     /locus_tag="CPT85_00625"
     CDS             11265..11930
                     /locus_tag="CPT85_00625"
                     /inference="COORDINATES: protein motif:HMM:PF00156.25"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27146.1"
                     /translation="MFGMFRQLLNLLYKRRCYICKSTRDNAILCNDCLKKIRFLPTKP
                     VKIINNADVYSMTIYTGIIMKMIRGLKYHRKKDLAYYHAKLMYDYWKELHEDEEEYII
                     VPVPMHKTREKQRGYNHMNLIAQEFAKLSGYEINTNLIYRTKNTTPQYALSKEERESN
                     LKNAFGINTKNIKLLRGKKILILDDIITTGTTISEMVSTLRSADYHVVKAFTASCSEF
                     NIN"
     gene            complement(11931..12566)
                     /gene="ruvA"
                     /locus_tag="CPT85_00630"
     CDS             complement(11931..12566)
                     /gene="ruvA"
                     /locus_tag="CPT85_00630"
                     /inference="COORDINATES: protein motif:HMM:TIGR00084"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="DAB27147.1"
                     /translation="MYDYIKGKLVSKQPASSKGAAIVVDNNNMGYLIHTTNRNIALAK
                     EEGSDIKVYTSLIHREDAMILCGFLNREDRDIFNILLSVSGVGMKVALVLLDEFSGYD
                     LISAVIRGDFKELSRAKGVGSKLAQKIILELKDKLINWQKSSPVDVSDISSTQREMSE
                     ESLSEAQAVLLSLGYSVAEAKGAIKMACQSVTKSDSSEEILKEALRYLAME"
     gene            complement(12539..13468)
                     /gene="bioB"
                     /locus_tag="CPT85_00635"
     CDS             complement(12539..13468)
                     /gene="bioB"
                     /locus_tag="CPT85_00635"
                     /inference="COORDINATES: protein motif:HMM:TIGR00433"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="DAB27148.1"
                     /translation="MDIQELLRLYNLPLDELLNISSMYVKDEVEFCSLINARNGKCSQ
                     NCKYCAQSSHYNTQIETFPLVETDKVKSAAQDAVKNKASRFAIVTSGKTPDESDFDKM
                     LEMIKEINKFDELQSCASIGILNEQQAQKLAQAGLKRFHHNINTAESYYGEVCTTHTF
                     EERLNTCKLVKKYNMELCCGVILGMGETVEQRAQMALTLAEIQPDSIPINILMPIPNT
                     PFENYLDKIDEENVLRTLAIFKIANPRSILRFCGGRMRLSKENQQKALKTCVEGIMVG
                     NYLTTIGAKPQDDIDMVTQLGKKIKCTITSKAN"
     gene            complement(13550..14053)
                     /locus_tag="CPT85_00640"
     CDS             complement(13550..14053)
                     /locus_tag="CPT85_00640"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27149.1"
                     /translation="MYTNGQTTAIIKKGDVDMPVGSVNYSNNAVNFGRKPHVSSETKR
                     TAAYVAAGVATGAAVAAGVVYRKNIGSMFSKIADKFATFFKQKTGKMKGLPAPGDVKP
                     SVTQAMQGTVDKVKVKQGFKGFMYRVGNGIKKGFNKVVDFFKTLGGKIKNIFKSNKKN
                     LSSTQVK"
     gene            complement(14166..14363)
                     /locus_tag="CPT85_00645"
     CDS             complement(14166..14363)
                     /locus_tag="CPT85_00645"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27150.1"
                     /translation="MTDGNPSLDGTTQVMFQDGKEISSFNQIYGAGAGGGGGALSVDE
                     NGSIAIGNGGDGSSGLVFIQW"
     gene            complement(14350..>14637)
                     /locus_tag="CPT85_00650"
     CDS             complement(14350..>14637)
                     /locus_tag="CPT85_00650"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27151.1"
                     /translation="GGGGGGQGAGDIRRRMLTSGQYQNNEVTMGLDGQPSYIKNGAHI
                     LQGSGAAKIIPKQEDTYSNAYNDDGMPVGQNGQLSDILTNKKTGTGGXDRW"
     assembly_gap    14364..14365
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    14638..14728
                     /estimated_length=91
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         4569 a         3094 c         2996 g         4083 t
ORIGIN      
        1 cccgccagtc tgaagcactg ggcaaaatga ttagcaaaaa cacccagggt acaaccgtaa
       61 aagtagtttc gggctttatg aaacccatcg caggcccgat aacatcacct ttcggttaca
      121 gaatgcaccc tatctttaaa agacagatat atcattcagg gattgatatc gggggtatca
      181 acggcggaaa aatccgggca tcaaactccg gaaaagtact atacgccgga tggtacggtg
      241 gatatggcaa agttgttatc atagaccacg gtgttatcaa cggacagcct attaccacat
      301 tgtacgcgca catgtcagga tatgtggtca gccccgggca aaatgtgctc aaaggtcagg
      361 ttgtgggcta cgaaggctcc accggataca gcacagggcc gcattgccac tttgaagtaa
      421 gggttaacgg aaaaccacaa aacccgctta attacattta aacaatatag gtgctttagt
      481 gaaaaacaaa ctttttataa cgttagctat aataatggca atgagcgcag ggctcagtgt
      541 ttcttatgcg gcagaaacac tggatgtgcc tcaaaatacc ggaatagagc aaaatgctga
      601 caatgacaaa aagcaagact ctgttaaatc tgacgaacaa aaacaggaag acgaaaaaat
      661 ttccgataaa aacaaagctg acgacaaann agcaaacgac tccgacaaag aagacaaacc
      721 aagaaagttt ttctctaaag cagaaaaaaa acaaaagaaa aaagaatcag cttacgaaga
      781 cggcccttca acagacgtgc ttgtagacag tgaaacaata gaatacttcc ccgaacgcca
      841 cgagtttgaa gctgttggca atgccaaagt tacattcccg agcgaaaact ccactcttct
      901 tgcagacaaa attatcttca accacgacac aaactttatc aaaggttatg gcgatgttgt
      961 actcatcaaa gaaggtcaaa aagtaaacgg tgactatatt caggtaaacc ttaacgaaga
     1021 caacgcaatg atgacgcacc ctgtgctgaa ccatatggcc atcaagataa gagcaaaaaa
     1081 tgcaacggta aatgatgctc aaacagaggc acttgacggt attgtaacct ttaatgacaa
     1141 aacaagttat cagtttgtat cccgcccgat tatgggattt gataaaccaa tgatggacga
     1201 agttatccca aaaaacttct atttcaaaga aaaatacgac aacaaatggc gtcttaaagc
     1261 aaaaaccatc atcattgact cttacaaaga cagagacatt gcaacactca aaaacgcaga
     1321 tatttatatt aaagacacaa aactgggttc tgcgggaaag atgaaactgt atacagacaa
     1381 agaacagcag tatatcgaaa caaatatgct ggagttgggc tctttaagaa acctgggtgc
     1441 gtttatttct cnntattgta ctgcaaacgc caaacgcttc tacattaaaa atcggccctg
     1501 ctgttacata caaaagtgac ttcggggtgg gtgcaatagg tcgtttcttg acagacaaaa
     1561 acagaacaga cttcggttgg tcaagctcta aaagcaaatt tgttgttcga ggcgagcagg
     1621 aattcacaga caatttaaaa ctcgaatacg gcataaattc ttatatgaac aacggctttt
     1681 taggcggaag aatgccaaaa tacggattcc agtttgtaca taacaaaaac tatgagctca
     1741 aagatctggg tgtgaatttt accaacaaat atattgccgg ttttgcaaga gactggggcg
     1801 acagatcttt ttccacaaca aaatttgcat ggcaaacaat gagcagcaaa ccatttttta
     1861 cctataaaaa tccggaacaa aaatttgcac tggattttgg tttgaacgca cagacccacg
     1921 ttgctttata cggaacaggc gataccatgg gtattgtcag agccggcccg tatttaagaa
     1981 cacaatataa atcatggcag caatacattg gatatttcca gggaggtcag gcaggagatt
     2041 ctccatttta ctttgataaa aacttctacg gaaagtcaaa cgtggtgctt ggtgaatctt
     2101 tgcgtctgtg caaatatttg acagtgatgt acacagcaac aatcgtgtta tccaacgaca
     2161 cacccgatga cagaatgctc caggaaaaca gattctactt tgcaataggg cctgatgacg
     2221 taaaattcct catcggatac gatgcataca gacaaaacgc atctatgggg ttgatgatga
     2281 atgttggtgc tgaaaactcc gatgttgaat tcaaacgcct tatcttaaac gacccgaccg
     2341 caatcggcca tgtagaaaaa acagaaaaac aaaaaatggc tgacaaaaag aaaaaagann
     2401 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnng ggattacaac cccggcttta
     2461 acatgatgcc cggcggtgca atgttacagc cttctttaat cagacctccg gggatgtaat
     2521 taaaaaacac atttgtagta taataaatga gaataatttg actatttgac aaggggaata
     2581 aatataaatg actctaaaag attggttcga aaccagaaaa gaagaacaac aggccgcccg
     2641 tccgatagac cctaaaatcg acgacaacat tggcaaactc tgggtaaaat gtttcaactg
     2701 caacgcgcag ctccccagaa aagaacttga acatcacatg atggtatgcc ccgagtgcgg
     2761 ataccacttt agaataaatg caagaacaag aatagaacag gtctttgacg ttggaacatt
     2821 taacgaatac tacgaaaata tttcaccgtc cgatccgctg gaattctttg atacagaatc
     2881 atataaggac agacaggcaa aagcaaaaga aaaaacaaac ctcaacgatg ctgtaataac
     2941 aggtacaggc aaagttgaag gcgaagaaat tgcctgcgca atcatggatt ttgaatacat
     3001 gggcggttct atgggcagcg ttgtgggcga aaaagttacc cgcataattg agcttgcact
     3061 ggaaaagaag cttcccgttg tgacaataac agcatcaggc ggtgcaagaa tgcaagaaag
     3121 cgcgctttct ctaatgcaga tggcaaaaac aagctgtgct gttgcaaaat tgaatgaggc
     3181 aaaacttctt tatattaata tcctgacaga cccgacctac ggcggtgtaa cagccagctt
     3241 cggcacaatc ggcgatatta ttattgcaga acagggtgcc cgtatcggct ttgcgggaag
     3301 acgtgtaatc gagcagacaa tcagacaaaa actccctgcg gatttccaga cagcagaata
     3361 tcttatgaaa cacggccagc ttgatatgat ttgcaaaaga agcgagctaa aagaaactct
     3421 ggcaaaaatc ttaagattac acagacacta atatttaaag acactttcag gacagttggt
     3481 attatgaaat tagattttga aaaacctata acaaaaattg aacaaaaaat agaagaacta
     3541 aaaaaaatga gtgaagaatc aggtatggac ttgtcaaaag agattgaagt ttttgaacaa
     3601 cagtctcacg aatacaaaaa ggaactgtac gaaaacctaa aacccgtaca gaaattgcag
     3661 attgcaagac atcctaaccg tccgaacttt ctggactaca tcaatctgat gacaacagat
     3721 tttgtagaaa tgcacggcga cagagagggc acggacgaca gagcaatcat cggaggcgtt
     3781 gccaaaattg gtgacaaacc tgttatgatt gtgggcacgg ttaaaggcaa atccacaaaa
     3841 gaaaacctcg aatacaactt cggtatgccg cagccggaag gatacagaaa agcattgaga
     3901 ctttttgaac atgccaacag attcggcctg ccgatcgtaa ctttgattga cacccctggc
     3961 gcataccccg gtatcaaagc agaagaacac ggtcagggca ttgctattgc ggtgaacctt
     4021 aaagaaatgg ccaaacttga tgttccagtc attgccgtaa tcacaggcga aggctgctca
     4081 ggcggagcat tgggccttgc tgttgcaaac aaggtgcttg tgcttgaaca cgcctattac
     4141 actgtaattt cacccgaggg ctgtgcctct atcctgtgga gagacgctgc aaaagcttct
     4201 gacgcggcag atgcactcaa aattacaggc cctgatttgt taaaattcaa tatcattgac
     4261 ggcgttgtaa aagaaccttt aggcggtgcg cattacgatt acgaagcaat gggcgaagaa
     4321 ctcaaaaagg aaatattaaa tgcactcgat gagtacaaaa acatgtccgc tcaacagcta
     4381 aaagacgacc gctacaacaa gttcagaaga atgggcgtat ttggaactgc acaatgaaag
     4441 actacttcga aatttcagta aaaatcaacc cggctgtcat tgaaattgtg acagaaattt
     4501 tctttgaccg ctttgaatgt gaaggggttg tacaagcaga agaaaaatac aaagaccttg
     4561 agctcatcga aacaacaaac aacgtggcaa aaggatatgt attgtgtgaa gaagaggatt
     4621 tttctccgtc agaaatccaa aaaatcttta ctcacgcaaa agaagaactg aaaaaagaag
     4681 gttttacaga cgaagaactg ggagaatgga caatctccgc aaaaaaaatc atcaatcagg
     4741 actggtcgca aaaatggaaa gaacactgga aaccgaccaa agcctctgaa cacgtcatta
     4801 tctgcccgtc gtgggaagaa tgtacgcgca aaaaagacga tatcctgatt accctggatc
     4861 ccggctctgc ctttgggaca ggcacgcatg ccactacaca gctgtgtatt caagcaattg
     4921 aaaaatacct gaaaaaaggg gatgaagtcg ctgatatcgg tacaggttcg ggcattctgg
     4981 ctatcactgc aataaaattc ggcgcatcac acgcagtggc cattgacaac gaccctcttg
     5041 taatagatgt tgcaaaagac aacgcgcaga tgaacaatgt gttcaacaaa atagattttt
     5101 cgcatgcaac tgctgatatg ctcagcgagc agtacgattt tgtgtgtgca aacattttgc
     5161 acaacgtgct tgctgaaatc atgggtgatt taaaaaacat tatgaaaccc gcttcataca
     5221 tggttctaag cggtattctt gatgagaaaa aacaggttgt gcttgatgct gtagaaaaac
     5281 acggactcaa ggtaattgaa atccttcatc aggagcaatg gactgcaata atagtgcaaa
     5341 agtagttaca tatatgtaaa accgattttt tatgctaata ttggcttatg gtttcacagg
     5401 taattacggc tactgtcgtc ggtattgatt cttataaaat ccttgtagaa gtagaccttg
     5461 tacaatccat accctctgtg gtgattgtag ggctgccaga tactgctgtt tccgaggcaa
     5521 aagaacgcgt gcgcacagcc attaaaaact ccggttttgt gttcccaaac cagaaagtta
     5581 taataaacct tgcacctgct gacataaaaa aggaaggcac caactacgat ttgccgattg
     5641 ctatcggaat acttgcacgt gacggtattg tggacgaaga aaaaatcaaa gatacagcct
     5701 ttttagggga gctttcttta gacggttctt tacgtgcggt gaacggaata cttccaatta
     5761 ctgcaggctt gcgagagctt ggcataaaac aggttgttgt accgcaagac aacgcaaaag
     5821 aagctgctct gattcctgat attaaggtgc ttagtgcaaa aaaccttgct caagtagcag
     5881 ctcattttgg cacggaagag cattatgcag acaattccgg tgaaaaagaa ctagaggtgt
     5941 gtgaagttta tattgatgac tacctgaacg aatacacaac cacacattac gaatatgatt
     6001 ttaaagatat taaaggccag ctaaaagcaa aaaaagcact ggaaattgca gctgccggag
     6061 gccacaacat actaatgaca ggcccgcccg gctcaggtaa aactctgttg tccaaaagtt
     6121 ttgcatcaat attgcctcct cttgagctgg aagaagcaat tgagctgaca aaaatataca
     6181 gcgtatcagg tcttttgcag cctgacaacc cgcttgttaa caaacggccg tttcgtgtag
     6241 tgcaccacac agcctctgct gtaggaataa taggcggcgg ctccaacccg aaacccggtg
     6301 aaatcaccct tgcccacaaa ggggtgttgt ttcttgatga aatagtggag tttccaagaa
     6361 gcgtactcga agtactgcgc caaccgttgn ncggggaggt agtaatttcg cgcgcacaaa
     6421 caagtgttaa atttcctgcc gattttatgc ttctgggggc aatgaatcct tgcccttgcg
     6481 ggtatcttgg cgattctcaa aaacagtgca cctgttccga attccagatt caaagatacc
     6541 gctcacgcct ctcgggcccg cttttggacc gaatcgacat tcagatagat gtaccaagat
     6601 tgagctctga tgagctttta aacaaaaatt ttaaatccga atgctcggct gacataagaa
     6661 aaagggtgat aaaagcaaga caaattcagg tagaaagata caaaaaccac cctattttga
     6721 ccaactcgca gctcaatgca gagctaataa aagttttttg caaacttgat gaccagagcg
     6781 aaaaccttct aaaaaacgct atttcacgtt ttaacctttc aggccgttca tatgacagaa
     6841 tcctaaaact cgcaagaaca atcgccgacc tggaaaacag tgcaaatatt gaaagcgccc
     6901 atgttgcaca ggcgcttcaa tacagaaatt ttgtcgataa tgcttagata attattcttt
     6961 tacaagctca aaaatatctt tgcaaatttt aaatgtttct tttgccatct caatagagag
     7021 catgtttggc ccgtcgcaaa gagcatggtc agggtctggg tgtacttcaa aaaacagagc
     7081 cttagcgcct gctgccatgg cagctttagc cagtgtagaa acgtattttc tctcgcctga
     7141 tgagcactcg ccggcgccac cggggagctg aacgctgtgt gttgcgtcaa acactacagg
     7201 aatacccatt tcctgcatta taggaattcc tctcatatcc acaacaaggt tgttgtagcc
     7261 aaagcttgta cctctgtctg taaaaaggat tctgtcattg ccggagtcgg aaactttctt
     7321 tgcaagcggt ttcatctgtg cgggtgcaag aaactggcct tttttgatat taacaatttt
     7381 gcctgttttt gcagctgcaa cgagcaaatc tgtctgtctg cacaaaaatg ccggaatctg
     7441 caaaatatcc gcaacctctg ccacgggtgc tgcctgatcg ggtgtgtgga tatcagttac
     7501 gataggaagg tcaaactctt ttttgacctg agcaagaagc tcgaggcctt tttccatgcc
     7561 gggacctcta aaagaattga tagagcttct gtttgcttta tcaaacgaag atttaaaaac
     7621 atagtttata tcaagctcct gcgtgatttt tttgaggttt tcagcaacct taaaaagtac
     7681 atctttgttt tcaattgcgc aaggacctgc aaggatagac agcttgtcac cgcctatttc
     7741 aaaattattc agcttaaccg cttttatagt agtcataaca ctctccacat aacttttgac
     7801 aataatgtaa ctaaattgta aaatttagtt aagtaaaata attatacatc aaagtaatca
     7861 cattagtaat tggaaaaaaa tagtaggagc aaaacatgtt aatagaagaa ttgttggaag
     7921 acgctgtagg taaaggcgca agtgatattc atatttcagc taacctgccg ccggttttcc
     7981 gtatagacgg taaattaatc agaacaaaca tggaagctct tacagccgag aatgttgaga
     8041 cacttgtatt cccgattttg aacaacgaac agagaagaaa actcgaacag gaatgggagc
     8101 tcgacctttc ttacggtatc cacgggcttg gccgtttccg tgtaaacgtt tacaaaaaca
     8161 acggcacata tgctgccgca ttcagaacaa tcaacacaca ggttccttct ttcgaaacat
     8221 taggccttcc gcctgttgtt aaaaagatta cagaacgccc cagaggcctt atccttgtaa
     8281 cagggcctac aggttcgggt aaatctacaa ctctggcttc tatgattgac cacatcaatg
     8341 aaacaagaaa cgagcacatc ctcactatcg aagaccctgt tgagtttgtg cacaagtcta
     8401 aaaaaagtgt tgttcaccaa agagaactcg gacaggacac ccgttctttt gcaaacgctc
     8461 ttaaatcagc tttgcgtgaa gaccctgata tcatcctcgt aggtgagatg cgtgaccttg
     8521 atacaatctc gctcgctatc acagctgcag aaacaggcca ccttgttatg ggtactttgc
     8581 acacgtcttc tgccagccag actattgacc gtatcatcga tgtattcccg caaggtcagc
     8641 agcagcagat tcgtatcatg ctttccaact cgctttgtgc ggtattttca cagacacttt
     8701 tgccaaaact gtctgaaaat ggcgagaaaa aaggccgtgt aatggcacag gaaatcatgg
     8761 ttgtaaacgg tgcgattgcc aacctgataa gagaaggtaa aacatcacaa atgtactctg
     8821 caatccagac aggtgcacag cacggcatgc agactcttga gacagcttta gccaaccttt
     8881 acaaaaaagg tcttatctct gctgaagacg ctcttgtcaa atcaagccgt ccggatgaat
     8941 taaaacgtct tatcaatatt gcttaggcga ttttttatcc ttgtttagaa caatattctt
     9001 tttaatgtac tcctgtacat tagaggggat ttggatgttt tgcagcccga gattgtattt
     9061 tttcatctcg gcaagtttat cctgctctga catcaggtct tttttgggga ttctgattga
     9121 atttttgacg ttttcaaact cttttgattt gccagcattg gaaatgcttg caattatgta
     9181 atctatgtca ttggacgcta tgccgtgttt ttgcgccagc tctgtcacac taattccaag
     9241 aggcagcctg taaagccact gcaaggacag ggcatccctg tttgacaggc tcacaacacc
     9301 gtatttgtga ggagtgtaca tgatatcact atcatacgga ctgtgcccga gcccgagtgc
     9361 gtggccgatt tcatgcaaga ttgtgtgata gacctcgttt tcatcctgat actgctggtg
     9421 caaaataccg tcagaaaggc ctatttgcac ctcggcagag tagagtcttc ctgcattgtc
     9481 aaaatgaaaa tagcaatgcc ccagagcctt tctatccaca cgcttccagt cgaggttcac
     9541 ctgtgattca ttcagggttt gcacaatttt aaacttaacc ttgccgccgg aaattttttc
     9601 ccactcgcca agcgcacgct ttaccatggc ctgatatctg taatcatcat tgcttctttg
     9661 tgcgtaccac cgaaacggtg ctatatagaa cctgagcgga aaacaatgct cgggccatnn
     9721 tcaatttatt atcttttaaa ttgtcctgaa gataagttaa aagttccata atttgatttt
     9781 aaatttgttt ggtaacaatt gcaaatatgt cgttaaaaat cagcaccatc ataaggatta
     9841 tcaacagcaa gaagaagaag ttactgattt ttgccataac tttttcatca agcggtttgc
     9901 ctttgaattt ttctataatc aaaaacatca aatgcccgcc atcgagnnag agccggtatg
     9961 ggaagaaggt tcataacggc aaggtttatg ctgatgattg cagtaagcag gattccattt
    10021 aaaatacctg tctgttcaat catatccccg cccatttttg ttgcagcaac aataccgcgc
    10081 agctctttta cgggaatttg gccagtgagg agtttttcca gcccgattag agtgtatttt
    10141 gtgtttatcc aggtgtattg aagcgagcct gtgacaattt ttgcgggaga gtctgtgtga
    10201 ataagcactc tttctccgtc tctctcgatt cctataaggc cttcttcgtt agaatagatt
    10261 ggttttagag taagtatttc atccttgccg ttaacttttc tttttactgt aaacaccatt
    10321 ggttttcttg tatcagaaag ggcttttgca aggtcagaaa gcgatacaag cccgtttgcg
    10381 ttatattcgc ttttaccttc gaggctgttt ctcaactctt tttgttcgct gtttaatttt
    10441 atgtcgtcat ttttaatttt ttctatgccc ataagagccg ctgccgaaag gtgcatgggt
    10501 gcttcatccg ttgcggcaat gaggttgatt ttttcgcctt ttgttatggg agaatacgca
    10561 tcttttatgt cagggttttt gtcttgcaat tttttgaggt tggcatagta agcttttgta
    10621 gacacatagc cgtcgaattt tttactggct tttgcataga tatttgtctg aaacggctgg
    10681 ataatatttg agccgttgat tttgaggata atatcgcctt tttgcaatcc cgaatcattg
    10741 acagacgcgc cctgtgcctg attaatattt tttacataaa caattgccct gtctgtcggc
    10801 agtttgtgag taacagccgc tgtgaccata accagtgcta ttgcacacag catgttggct
    10861 gccacacctg ctgacaggac tattgcgcgt ttccaaatag gctggttgtg gaaaaactct
    10921 tttgaatctt taggaagctc tgtattttct tcatcatctg gaaaagaaac gtaaccgcct
    10981 aaaagaagag catgcacaac aacttctata tctttgattt ttgccttaaa caacgtaggg
    11041 cccacaggca ggccaaagcc gaatcttgta accttaaatc ccagtgccag tgcggtcaaa
    11101 aggtgcccga gttcgtgcac aaggattaag aagcttatca gcaaaatcat gattattata
    11161 ttcataaatt cctctttcga atatgtaaac tttctgtaat ttatacgttt attttagcat
    11221 ataatcatat aaagcaggtt gtttcgtatt ataataatta tcatatgttt ggaatgttta
    11281 gacaattact caacctgtta tataaaaggc gctgttacat ttgcaaaagc acacgggata
    11341 atgcaatttt gtgcaatgat tgtcttaaaa aaatacgttt tttgcccaca aaacctgtaa
    11401 aaattatcaa caatgccgat gtatacagca tgacaattta cacaggcatt ataatgaaaa
    11461 tgatacgggg attgaaatat catagaaaaa aagaccttgc ctattatcac gcaaagctga
    11521 tgtatgacta ctggaaagaa ctccacgagg atgaagaaga atacattatt gtgcccgtgc
    11581 caatgcacaa aacaagagaa aagcagcgcg gttacaacca tatgaatttg attgcacagg
    11641 agtttgcaaa actgagcggg tatgaaataa acacaaacct gatttaccgc acaaaaaata
    11701 caacgcctca atatgccttg agcaaagaag aacgcgaatc taaccttaag aatgcatttg
    11761 gcataaacac aaaaaatata aaactgctca gaggcaaaaa aatactcatc cttgatgaca
    11821 tcataacaac cggcacaaca atttccgaaa tggttagcac attaagaagc gctgattatc
    11881 acgttgtaaa agctttcact gcaagctgca gcgagttcaa cataaactag ctattccata
    11941 gcaagataac gcagtgcttc tttcagaatt tcttctgaag aatcagactt tgtcacactc
    12001 tgacaggcca tttttatagc gccttttgcc tctgcaacag aataccccaa agacaagagc
    12061 acagcctgtg cttcagatag tgattcctca ctcatttctc tctgcgttga agaaatatcc
    12121 gaaacatcaa caggggagct tttttgccag ttaattagtt tgtctttaag ttcgagaata
    12181 attttttgtg caagctttga ccccacacct tttgctctgg aaagctcttt aaaatcacct
    12241 cttattactg cggaaattaa atcatatccg gaaaactcat cgagcagaac aagtgcaacc
    12301 ttcataccca caccagacac acttaaaagt atgttgaaaa tatcacggtc ttctctgttc
    12361 aaaaatccgc acagtatcat tgcgtcttct ctgtgaatca aagaagtata aacttttatg
    12421 tcagagcctt cctcttttgc cagtgcaatg ttcctgtttg ttgtatgaat caggtatccc
    12481 atgttgttgt tgtccacaac aattgcagcg ccctttgagc ttgcaggttg tttggatact
    12541 aatttgcctt tgatgtaatc gtacatttta ttttctttcc gagttgtgta accatatcaa
    12601 tgtcatcttg cggctttgca ccgattgtgg tcaggtaatt ccccaccata atgccttcta
    12661 cgcatgtttt tagcgctttt tgctgatttt ctttgctaag gcgcattcta cccccgcaaa
    12721 aacgcagtat ggagcgcgga ttggcaattt taaatattgc aagcgttctc aaaacgtttt
    12781 cttcatctat tttgtccaaa taattttcaa aaggagtatt tggtatcggc ataagtatgt
    12841 ttattggtat tgaatcgggc tgtatctcag ccagcgtaag cgccatctgc gcacgctgtt
    12901 ctacggtttc tcccatacca aggataacac cgcagcacag ttccatgtta tattttttta
    12961 ccagtttaca ggtgttgagt cgttcttcaa aagtatgggt tgtacaaacc tcgccatagt
    13021 atgactctgc cgtgtttatg ttgtgatgaa accttttaag ccctgcttgt gcaagttttt
    13081 gcgcctgttg ttcgttcaaa atacctatcg aagcacagct ttgaagctcg tcaaatttgt
    13141 ttatctcttt tatcatttcg agcattttgt caaaatcact ctcatcagga gtttttcctg
    13201 acgttacaat agcaaatctt gatgctttgt ttttaacagc gtcttgcgca gctgatttga
    13261 ccttgtctgt ctcaacaaga ggaaaagtct ctatctgtgt attgtaatga gagctttgtg
    13321 cacaatattt gcaattttgt gagcatttgc cgtttcttgc attgataagc gaacagaatt
    13381 ccacctcgtc ttttacatac atcgaagata tgttcaaaag ttcatcgagc ggaaggttat
    13441 atagtcttaa aagttcttga atatccatag tgacataata taacaaacag cggacttttt
    13501 aaatttgagt ccgctgtttg tttttcatac ttcgattttt cgggttttgt tacttaacct
    13561 gtgtggaaga aagatttttt ttattacttt tgaaaatatt tttgattttt ccgcccaaag
    13621 ttttgaagaa atctacaact ttgttaaagc cttttttgat accgttgccg actctgtaca
    13681 taaaaccttt aaaaccttgt ttaactttaa ctttatctac agtgccttgc atagcttgtg
    13741 ttacagatgg ttttacatca ccgggagcgg gaaggccttt cattttacct gttttttgtt
    13801 taaagaatgt tgcaaatttg tctgcaattt tagaaaacat tgaaccaatg ttttttctgt
    13861 acacaactcc tgctgctaca gctgctccag tagcaacacc tgctgcaaca taagctgctg
    13921 tgcgttttgt ttcgctgctt acatgaggtt ttctaccgaa gtttaccgca ttgtttgaat
    13981 aatttactga gcccaccggc atatcgacat ctcctttttt gattattgct gttgtttgtc
    14041 cgtttgtgta catgctaata cacgtcaaaa aaatcttttg ctacatgaaa ttaaaaatct
    14101 taatatttgt ttacaaaaaa aagctctgat aaaatcagag ccgaataagt actgttttag
    14161 aaaaactacc attgtataaa aacaagaccg gaagaaccat caccgccatt accaatagct
    14221 atacttccgt tttcatcaac cgaaagcgca ccgcccccac cgcctgcacc ggctccgtag
    14281 atttgattaa agctgctgat ttctttgccg tcttggaaca ttacctgtgt tgtgccgtcg
    14341 agagaaggat taccatctgt catnnccgcc tgttcctgtt tttttattcg tgagaatatc
    14401 cgacagctgc ccgttttgac cgacaggcat tccgtcgtcg ttataggcat ttgaatatgt
    14461 gtcttcttgt tttggaataa tttttgctgc gcctgacccc tgcaaaatgt gggctccgtt
    14521 tttaatgtag gaaggctgac catctaaccc catggtaact tcattgtttt gatattggcc
    14581 cgaagtcaac atccttcttc taatatcacc ggcaccctgg ccgccgcctc cgccgccnnn
    14641 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
    14701 nnnnnnnnnn nnnnnnnnnn nnnnnnnntt gaatattttg ctacaagatt atccccgttc
    14761 caatagcacg cataaacccc gtgcggaaga ttaaatttag cgcgatgttt ttttgtaatt
    14821 acaggaacag aagctattgt tattacgcaa actaccaaaa gcgtgattaa tgcttctgca
    14881 agagaa
//
LOCUS       DABS01000021           31801 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_14601, whole genome shotgun sequence.
ACCESSION   DABS01000021 DABS01000000
VERSION     DABS01000021.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 31801)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 31801)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31801
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..287
                     /locus_tag="CPT85_00655"
     CDS             <1..287
                     /locus_tag="CPT85_00655"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27082.1"
                     /translation="GLFKLYDDFVVNNNLCYQHCVDIVCCAMMKNHTAGEIAKARIAF
                     NEKQYLFFENIAPITMAFVEPLTPPKILEKSAKFKEDAIKKKKPMKKAMN"
     gene            complement(574..1062)
                     /locus_tag="CPT85_00660"
     CDS             complement(574..1062)
                     /locus_tag="CPT85_00660"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27083.1"
                     /translation="MCLITSAFTIKGGVSYTVETARTEAFSNIPLSINISDYASYFSD
                     YNYIANKNVMNKNKVKIRDRYITFFSDKTYAIYYKKNKSVQFYYDINGKLDFISFSIN
                     KKYPIKVLKYDRNGILDSISLFISNNESFVFDLNKKLIAHWKGNNCYNEKGELVMTRE
                     AK"
     gene            1187..1405
                     /locus_tag="CPT85_00665"
     CDS             1187..1405
                     /locus_tag="CPT85_00665"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27084.1"
                     /translation="MANVKRELEKSGTQFGDSIKLLKDTWAKQTKDINSFVSALKDQN
                     GKVDFKNLLSGGLYNTKKQISFFFASHY"
     gene            complement(1379..1909)
                     /locus_tag="CPT85_00670"
     CDS             complement(1379..1909)
                     /locus_tag="CPT85_00670"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27085.1"
                     /translation="MLKKLVFVFLLMQLFSFPVYSLTITGGIEYTVDMAREESFNNIS
                     TTIDIQQFKKYLIDPNYEKHKLLIAQNKLRYKNIRILVFSDGVYVIDNLLNQKETFYY
                     YPNGSLVQVEILLKKGYPEKSVIYDNKGVLTSVSYCISSKEQFVFDLNKKLIAHWKGN
                     NCYNEKGELVMTREEK"
     gene            complement(1973..2527)
                     /locus_tag="CPT85_00675"
     CDS             complement(1973..2527)
                     /locus_tag="CPT85_00675"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27086.1"
                     /translation="MLMYTYIMRKILVIMICFLVTFAFSSLHINAYTIKGGISYTVSK
                     ARQIAFENVNYKIDIYKYKEFFIDKNFAINQKVMLKDKKKYKNRYLTKFSKGEYAIRY
                     KNQPSHAYYYDSSGKLCYIDIDLNSSYPKQRVTYNINGILDSVTLDTSSNEQFIFDTN
                     KQLIAHWIGNNCYDDKGVLIDTRH"
     gene            complement(2674..3219)
                     /locus_tag="CPT85_00680"
     CDS             complement(2674..3219)
                     /locus_tag="CPT85_00680"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27087.1"
                     /translation="MSVKVMQKGLILILMIISMTIKPVFALKLTGGLSYTVETARTEA
                     FSNVPLNINISDYASYFSDPNYIANKKAMNKKKSYFRDRYLTVFSSGEYGVIYKNNKS
                     ISYYYDKNGKLESISFLINKSYPIKIVKYDKNGKLDSTALAVSSSESYVFDTNKKFIS
                     HWKGNNCYNENGELIITREKK"
     gene            complement(3221..3751)
                     /locus_tag="CPT85_00685"
     CDS             complement(3221..3751)
                     /locus_tag="CPT85_00685"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27088.1"
                     /translation="MKKFSYLLILVLLCNPVFAYTLKAGVVYTVEAVRCLAFEGVKKS
                     IDISKYAPYLKDYDFEDNKKAVAKKKFNFRNKKIQIFSDGSYSVLLKKAPNPYFIYNS
                     KGKLEVIIFCVDTNNYPKKSISYDINGNFRSVAYEINKQEQYVFDTNKKLIAHWIGHN
                     CYNENGILIMTRNEEY"
     gene            3788..4729
                     /locus_tag="CPT85_00690"
     CDS             3788..4729
                     /locus_tag="CPT85_00690"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27089.1"
                     /translation="MEYIKYNEHFDQSNLEKILANVKKEFEKSGKQFNDVFKSFKDTW
                     NEQTKEINSFVSGLKNENGKIDFKNLLSGGLYNTKKQISSKYDSLRSGIDADPNLSQA
                     QKDYYKKRYNMFEEEEQKEAYENSITGKATKKLSNEFSDGLSDMISGYKSFSDVIKDM
                     TGSLTDFMIKQFTEAISSLLFNEATSALFNNLLGAGLNMATGGASSALGFIGKLFRHH
                     SGGIVPSGANYSLPGTQEQLALLKGGERVLSPSENVNYENSQAASPVIVNSFNIKAWD
                     SKDVKKYLLENRQLLNQITFEGIKNNNAHLRHIVQNA"
     gene            4713..5120
                     /locus_tag="CPT85_00695"
     CDS             4713..5120
                     /locus_tag="CPT85_00695"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27090.1"
                     /translation="MFKMHKCIERNVMNKKIELLLNDIGRPYEMFNQDGTYQGCFYPV
                     QFLYPHKPRYKLRSKNDDKNYLYGLSKIKKHCIEIPPAELQAGDIIATRFRDELHVAI
                     YYQYGKIIHVFKEHTLQIGRLKMFKEYKCYRVI"
     gene            5122..7542
                     /locus_tag="CPT85_00700"
     CDS             5122..7542
                     /locus_tag="CPT85_00700"
                     /inference="COORDINATES: protein motif:HMM:PF13550.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27091.1"
                     /translation="MILSSVITVTASIVSGLLGFTGTIAATVCTTLGYLGAIAIYGGA
                     ALSMSKKKAKGLNSATYDGLLQTQTDQNLPLPLLYGTCKLAGNRIWQDENAQTHVKRI
                     VAFAEGEICEFSDIKLNDIPAGQIAGISINHYYGTSDQIVDGIVGGANQSERAQKVGS
                     LRNVAYLAISVPRSAKVDINYNLTAVVKGRKIRVYKNKYEYEIKYSENPAWVMFDFLS
                     CYNGLGLCINESGNISETLISELFDLESFIESAAYCDELIEYKHTNENGEEIIDMVPR
                     FTFNMIFDSQTSARTLIDEIYRSCRGGLFIKDGRLQFKIDKAEPVSRIFTAEDIIKGS
                     ETFQTIPKEEHYDILKCTYVSPDHEWQKVEATAEIPEYRDGVPIEHSVNIYSCTSFNQ
                     ASRLAWYYVNAKRIQPYFGSFQTDYKGYDLEVGDVISFDSLLMGLEKYKVKVVSVTDN
                     GAGIFTIEWRTYDERLYTDELGSKEPKVLVSTLTDVAKYPDDVQNFNVVQSNNLFNFV
                     WQPNANNTDKYEIRMGDTWETASVIKSSITENKYTMEIPTNGLFKFWIKAFNGYNYSK
                     NATLDVINVDSVPSLNEIVKINILEDIAGTLDENLRVYHNTIKLKEIDEKWHTLEENW
                     STMSGYYQQGGRWGTNTLANQGVYISQVYDIGDDLESIVSFDYKFTSADTQNDVLIEW
                     AYSSDGETFTDWIIANTGKFTFRYCKFRATLRAVNNVQTVLTDLNVAIDVPDKDLDME
                     LEITDSEGLRIEYSFIRPPSIVATVNDNNDAYVVITEKTNTYAYIVAYTNSGELTTCK
                     LSLRAKGY"
     gene            7562..9562
                     /locus_tag="CPT85_00705"
     CDS             7562..9562
                     /locus_tag="CPT85_00705"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27092.1"
                     /translation="MANSNYAWTDNPTVSGVSQCDTDVLNDCLMHLKYNHRTSGGGFS
                     LFDTKITDHVLSGDEALGWVIQGGVVTMTYPDAVNVIKEEYSNGVECTDGDVTYMLSP
                     TGRRIADISQYEAVDRLYETKGHAPYYVYDAVNQQFYLPKTKLLQQFTTNTDLVNTVN
                     EAGLPNITGTFGGTRDVAVAPTGAFYRNGWTPAPGAGSDTYAIAFDASRSNSLYGKSD
                     TVQPPSVNMLIYYKVGEVVVNSDLALIDAQEMIEDALQEVDTKINDGLSSLANASDAL
                     RQTQVTNCILEAPNNIKIDINENGYLVLKSGSTLIIPAGLDDEGNKKFEHKTLESDVV
                     FTNTDAITGNLKDFMPIVWYSNDASTAHSIGGVCVSQMFAGETAPTNAQDMYWYDTAN
                     NLIKFSGDTGASWEFAMASFPICQVDVIFESASVKYFNYPKAIFSHCGFIGSAYWLDK
                     EVKYLAPNGKSETGTLNNIEGVTQDVQIHIITDEESNNTASKCMAWVSSNSISWWGNA
                     SIKTSYTKPSVTGYTRYFDSNENYWKKADLSTTFTNTNLCPFATFNINTQNQILSMQP
                     YEIMQVAIGNNSVFWPDYTAGITISAFPYTAEYDGWLTASVIGDQGTGQNGYLQINGN
                     TVVHSYGLDYTTSQWVIPVSRGDVITAHQVGSVTIFPCKGGR"
     gene            9562..10110
                     /locus_tag="CPT85_00710"
     CDS             9562..10110
                     /locus_tag="CPT85_00710"
                     /inference="COORDINATES: protein motif:HMM:PF14301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27093.1"
                     /translation="MIKYAKIVNNKTGLCEVGIGTNEEFYASQGMTKMEVEQSEVDSL
                     WYLSDKCPVKSEEQKLEEAKEAKIQEITLAKEAAFKAGIYFNGAHYDCDDRAQDRTGN
                     RLLLLNAMPVVTLEWLDYDYKPQLFSAQDFQTLCAAIFERIQFIEFKTGQLLQAVENA
                     SDIEEVNAIVIDFEQKDNDEEV"
     gene            10115..10936
                     /locus_tag="CPT85_00715"
     CDS             10115..10936
                     /locus_tag="CPT85_00715"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27094.1"
                     /translation="MSFNFNVQGITTVDNTQTGSSTVIDTISPQNIKGLCYWIDGEIN
                     TRKGQDRSYKGMQNLVGGDYISKVPSGMQESMNGTPVFGDKWCTLGGTGFMPNFASTE
                     QTIELCVEFNAKPYTFSNIIYVLHVPGDMEIWFGDNQDTIVRRLTFHLFESGAVSLDV
                     NKEMAANYNQRLYAAVRFKTGNPPEAELFINGISTGVPVTGKNTTLSSSGYNCGICGL
                     GNTSTSSVVPTESNKTPNGAFYGSTTKLYTLRRWTRCLSNEEILQNYKLDYSRFN"
     gene            10945..11238
                     /locus_tag="CPT85_00720"
     CDS             10945..11238
                     /locus_tag="CPT85_00720"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27095.1"
                     /translation="MANLGIIEIYGNEGWVDAEVKMAEKYEGFAFEAGKQYTLQVIGN
                     NKICITDGTTPEEEEGFEKSKDPFAYTHAASTKLFVKCKYQRPFTSIHVNIAD"
     gene            11249..11455
                     /locus_tag="CPT85_00725"
     CDS             11249..11455
                     /locus_tag="CPT85_00725"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27096.1"
                     /translation="MNKILETILRYLGQSSTYKGLFSVLAAFGVVLKPEMADAIIACA
                     LGIIGLINVIIDDHKHTDNKGAEA"
     gene            11455..11694
                     /locus_tag="CPT85_00730"
     CDS             11455..11694
                     /locus_tag="CPT85_00730"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27097.1"
                     /translation="MYSALITSLSNLFARLFEWKTTKTQHQSETEIIKDKKDYKKATN
                     IAEKIIDIAQQYKADMTFAHRLKFVRLVQAFKKYN"
     gene            11706..11972
                     /locus_tag="CPT85_00735"
     CDS             11706..11972
                     /locus_tag="CPT85_00735"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27098.1"
                     /translation="MDKIIEYAPIILVLVMFLIQYKIFVTPAQITELKSNLIEYIAEH
                     YVSEKTYRDNNISLENRVDRIDKNVNDVKTLLISIVQWHGNPNN"
     gene            11995..12459
                     /locus_tag="CPT85_00740"
     CDS             11995..12459
                     /locus_tag="CPT85_00740"
                     /inference="COORDINATES: protein motif:HMM:PF05838.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27099.1"
                     /translation="MDELLNFKKALGFVLKWEGGYVNNPHDKGGATNKGITQNTYNTW
                     LKSLSLAPRDVKNITQKEVEQIYYKNYWRKAGCHNMSPKFALLAFDTAVNMGVARVNQ
                     FMKAAGWKYPEKFIEARRAKYHEFAKYGNQKIFLQGWLNRLNALQDELKKIS"
     gene            12548..14191
                     /locus_tag="CPT85_00745"
     CDS             12548..14191
                     /locus_tag="CPT85_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014546218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride transporter"
                     /protein_id="DAB27100.1"
                     /translation="MQIYYDMCFENPIETVIAFDNGSLKHALNKIETLSKKYYLLGYI
                     RYEAKDVFLNKPVKTAQPPTPLPILYFEAYENFKPYHRDENACALFESKPCISFDEYK
                     KAIETIKDHIAQGNTYEVNYTCDWLVTTKAKNDKEVYDTLLKQXYNAYIKNSYETLLS
                     FSPELFFKLEGRKIITKPMKGTIKRGKTKQEDEKNIEFLKNDIKNRAENVMIVDLLRN
                     DLGKIAKTGTVKVPSLFDIETHKTLHQMTSTITAELRDDISFYDIFEAIFPCGSITGA
                     PKISTMEIIDLIETGKRNIYCGAIGFISPEKCVFSVPIRILQKTNEQTFFTYRTGGAI
                     VWDSDVVDEWEETITKASFLNQEFKIVETLKAHNKEFLFAKEHFNRMENSAQALGFKF
                     NKEIYSLKPEKDGLVRVLLSKNGDYKIQYNPLLEPATDIALISPIKTDXXXHKTTLRP
                     WYEKSFEKIKTREIYDEIFFNEKDELTEGARTNILLQINGRLYTPPLKCGLLNGIMRQ
                     TMIDEGTVQEKILYKKDLLNAEKILCINSVRGIKEVRLK"
     assembly_gap    12983..12984
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    13870..13876
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            14188..14766
                     /locus_tag="CPT85_00750"
     CDS             14188..14766
                     /locus_tag="CPT85_00750"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007545675.1"
                     /note="TrpG; with TrpE catalyzes the formation of
                     anthranilate and glutamate from chorismate and glutamine;
                     TrpG provides the glutamine amidotransferase activity;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate/aminodeoxychorismate synthase
                     component II"
                     /protein_id="DAB27101.1"
                     /translation="MILIDNYDSFTYNIVQYLQELGVTPRVFKNDEVTIEELKNIDFN
                     SVIISPGPGNPCDKSSTGVCEDIVKEFYTTKKILGVCLGHQLIASHFGARIVKDPEPY
                     HGKTSKIYIKRESKLFKDIPNGFEATRYHSLKAVDLPHCIIPLAYTDDKILMALKHRD
                     YEVYGVQFHPEAILTQYGHRLFENFLNIVLDT"
     gene            14811..15707
                     /locus_tag="CPT85_00755"
     CDS             14811..15707
                     /locus_tag="CPT85_00755"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27102.1"
                     /translation="MFDFTLFLNPVILAIIALFAGVVVYFIXFISKVKYINSSLVHLT
                     NVLKGFKKGNIVYRFKELDDIFSNNPFISNYWIEFKNTLVFNEGISLKGTAADTSSIQ
                     CTVDAGYFFNEETLVNSKLNYKFISAVPTILTGLGPLFTFLHISIAFSKVNFATQEAT
                     IASVSSLLASMKIAAMISVVAVGTSIIFMIIERILYKNMCKTPLNAFRLEMNKLFDSI
                     TSEKFLVDLLRESKLQNSALNQAFNTLPVQMKEAFDKSFKESLVPYLDNLIFSVNKLQ
                     ENIKKKGSQGILDDLFGSNDEE"
     assembly_gap    14892..14893
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            15714..16391
                     /locus_tag="CPT85_00760"
     CDS             15714..16391
                     /locus_tag="CPT85_00760"
                     /inference="COORDINATES: protein motif:HMM:PF00691.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27103.1"
                     /translation="MKYARYRQDNQNTGDDNVFWVTMSDLLLGLVVVFLVLFVFAITG
                     FTQNKVNEHEKQYEVTEKIAQELQKNNINVDVDKFSGRXXLFELNSWELSPKGRAYMS
                     KFVPVYFNTIMKDPDVRKNISQIIIEGHTDSQAFAGAKSVEDKYFKNMDLSLKRASSV
                     ARYIVYANYSGKEKYENELFKLLSVEGKGPSEPVIVNGKEDYAKSRRVELKLMFKDKS
                     ILDSIKK"
     assembly_gap    15962..15963
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            16467..16676
                     /locus_tag="CPT85_00765"
     CDS             16467..16676
                     /locus_tag="CPT85_00765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012531522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27104.1"
                     /translation="MGRIVIDRDVCKGCYLCVKACSKGLLKKSTEPNLHGDFPVEFDN
                     KDNACIGCAMCAMNCPDVAIREVYR"
     gene            16676..17757
                     /locus_tag="CPT85_00770"
                     /pseudo
     CDS             16676..17757
                     /locus_tag="CPT85_00770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004103988.1"
                     /note="catalyzes the coenzyme A-dependent oxidation of
                     3-methyl-2-oxobutanoate coupled to the reduction of
                     ferredoxin producing S-(2-methylpropanoyl)-CoA;
                     frameshifted; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate dehydrogenase subunit
                     VorB"
     assembly_gap    17560..17561
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            17757..18515
                     /locus_tag="CPT85_00775"
     CDS             17757..18515
                     /locus_tag="CPT85_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005984240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27105.1"
                     /translation="METLVYKRPESLLKDGHFTFCPGCGHGVVLRIIAELIDEFNLQK
                     DTIAISSVGCSIFLEKFFNLDVAGASHGRSPCVATGIKRCKPDKFVFTYQGDGDAATI
                     GFNETIHTACRGEHITTIMINNTNFGMTGGQASATTLVGQVTTTTPAGRKPELTGYPL
                     HAAEIVAKCDGTAYCARVAITDTKNIRKAKEALKKAFEMQIKGLGYAFVEVLAACPTN
                     WHLKPAESVEHIENVIQTVHPLGVFKDITAKEQV"
     gene            18515..19081
                     /locus_tag="CPT85_00780"
     CDS             18515..19081
                     /locus_tag="CPT85_00780"
                     /inference="COORDINATES: protein motif:HMM:TIGR02175"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     gamma"
                     /protein_id="DAB27106.1"
                     /translation="MQDMSVIISGFGGQGALFAGILLCHSAVFEGKHTTWFPAYGAEM
                     RGGAVNCAVNISDKEVPSPIIDKADAVIALNDASQEKFESKVKPGGFMIVNSSLCHLK
                     PKRTDIKYINIPFNELAQKLTQPTFINVMALGAFIEKTKILKLESIKEVMKEMAKTVS
                     AKKAALLPNNLESVEYGANIIKNQLVTV"
     gene            19074..>19883
                     /locus_tag="CPT85_00785"
     CDS             19074..>19883
                     /locus_tag="CPT85_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001254365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="DAB27107.1"
                     /translation="MYNQIMKETIEFIQKQIKDFVPEIGIILGSGLGDFADNLEGVRI
                     KYSDIPGFETSTVAGHKGQLVFAKVQGKNAVIMQGRYHYYEGYHISRIVYPVKVMKKL
                     GVKTLIITNAAGSVNKEYKAGDLMVIKDHINLMGVNPLIGENDSTLGDRFPDMSEIYR
                     KSLCDIAQAKGKELGLTVQKGVYAAMSGPSYETPAEINMLRIMGADAVGMSTVPEALV
                     ANYCTMEVLGISCITNSAAGVHPTRLSHAEVVETAAKVKESFKKLLNTVIAV"
     assembly_gap    19884..19919
                     /estimated_length=36
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <19920..21012
                     /locus_tag="CPT85_00790"
     CDS             <19920..21012
                     /locus_tag="CPT85_00790"
                     /inference="COORDINATES: protein motif:HMM:PRK09585.3-2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="DAB27117.1"
                     /translation="MSGTSLDGIDAALVHIDDDFNFEFIQGHSICYPDEVRKKLLEMA
                     NNNATTSDVCNLDFVVGRLFAQCANELMQKAGLCAEDVDYIASHGQTVFHIPQEIETG
                     GIKTRSTLQIGNISVISQLTGVTXRSKDIAAGGQGAPLVPFADELIFKKDKNRAIQNI
                     GGIGNVTVLSKDCDTFAFDTGPGNMLIDYCVQKFFNMPYDKGGEIALKGKFDEDWLQS
                     LMDELYYSMQPPKSTGRELFNNDYAQKILKNAPENKFDIIATITALTAKTIFDAYRHF
                     VLPKTSIQEIVLGGGGAYNKALIKYLNSYFNNTVIIKTHKDFGIDDKFKEAIAFAMLG
                     FCTLNKKCNNLELCTGAQKRVIMGLISYS"
     assembly_gap    20296..20297
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            21026..21919
                     /gene="murQ"
                     /locus_tag="CPT85_00795"
     CDS             21026..21919
                     /gene="murQ"
                     /locus_tag="CPT85_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017413759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="DAB27108.1"
                     /translation="MKYDDAATEHINRDTFNIDIVGTHDILTMINNEDMKVALAVKKS
                     IPQIAKGVDIIVRNFLQGGRLFYVGAGTSGRLGVLDASECPPTFNVAPDMVQGVIAGG
                     IRALKEAVEGAEDSEEMALQDFEDCDICDTDTIVGISASGNPRYVIKFLQVAKLRKCK
                     TIVVTSNPQARMKDYADCFICVETGAEAISGSTRMKAGTAQKMVLNMLSTASMVKIGK
                     TYHNLMIDVTPTNEKLKRRAVTIVTEICGCKEATARNVLEANGYKTKHAVLYILYGLD
                     YEEADKLLKQHHGVLRRIFEG"
     gene            complement(21928..22521)
                     /gene="fliN"
                     /locus_tag="CPT85_00800"
     CDS             complement(21928..22521)
                     /gene="fliN"
                     /locus_tag="CPT85_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013390515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="DAB27109.1"
                     /translation="MSDDNMQNDDFNKNEIPSADDDISGLNPAMNMPLDDDMPTAGDG
                     GMDFQTQQQLNENAVDYDFNEMQGIPANASQEEVHLNEAETAADDGPVTVRPVEFTPF
                     DSYTPTNTDTNKNLELLMDIKLELTVELGRCQLPVKKVLELTRGSIIELDKVAGESVE
                     LFANGKHVANGEVVVIEDNFGLRITSITDPEERIKSL"
     gene            complement(22534..23550)
                     /gene="fliM"
                     /locus_tag="CPT85_00805"
     CDS             complement(22534..23550)
                     /gene="fliM"
                     /locus_tag="CPT85_00805"
                     /inference="COORDINATES: protein motif:HMM:TIGR01397"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="DAB27110.1"
                     /translation="MSGFQSANNNNTDMFPQDYADKDIFINGIDETDEHKKGYKLYNF
                     RRPDKFSKDHLRGLQDIHKEFSRQLALVLTAYLRMHLEVDVVSVDQLTYDEFMRSVPS
                     PISIAIFELNPLPGQVLLGISFEVLSSIVDRMLGGVGTVEAKPRELTDVEESLLKKMI
                     ERTIQTLADAWSHIIPVESHLIGLDNNYSGIQVATAGEIVALITLEVHISGKHYGLIS
                     LCFPYPVLENILSQLTTQHIFQTKGIIATSEERQKMIEKLDTSLVDINVLFGQTDISL
                     KEFLDLKEGDVLKLDNAATEDLIIKVNGERKFYARPGRIKDKICVKVTDRYDYYVDAL
                     KRYF"
     gene            complement(23570..24193)
                     /locus_tag="CPT85_00810"
     CDS             complement(23570..24193)
                     /locus_tag="CPT85_00810"
                     /inference="COORDINATES: protein motif:HMM:PF03748.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27111.1"
                     /translation="MEIKMAKPTQAKEPETKDKEPQSGGNSILINVITTTIVCIIFIG
                     VNYFLQSNLLTTQLKSVTTEQAAEDDSEQLDKPEKGIVLDLGDFTMNLSDVDPRRYLK
                     ANVAVEITNPEPETQAEEPKKSGGHGGHGEAAAPDPKAAIVAEMEQYKPAIRDAVITV
                     LTSKTSDELASTAGKELAKQQIAEAVNGIFDGEREVIRVSFGQFIMQ"
     gene            complement(24197..24541)
                     /locus_tag="CPT85_00815"
     CDS             complement(24197..24541)
                     /locus_tag="CPT85_00815"
                     /inference="COORDINATES: protein motif:HMM:PF00691.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27112.1"
                     /translation="MLFDPGSAIIKPQAKATLDKISLSLAKFQNPVLIEGHTDSMPIR
                     NEKFPSNWELSTARATNIIKYLTEAHSFPPGRLSAVGYGEYMPVDDNKTPQGRAKNRR
                     VDIIVLSTQKNN"
     assembly_gap    24567..24596
                     /estimated_length=30
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<24597..24960)
                     /locus_tag="CPT85_00820"
     CDS             complement(<24597..24960)
                     /locus_tag="CPT85_00820"
                     /inference="COORDINATES: protein motif:HMM:PF13677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27113.1"
                     /translation="MKNDYYSNSNDYINRWVISYADFVTMLLALFMVMFATSSMGDLK
                     VKDVNKSIQKVFVSKPAQSTDIKQNTTDNQQDAQGETTPQSKLDNAGKTILDGGDGIL
                     DAKQIAQQIEKDINMTTSV"
     gene            complement(24961..25761)
                     /locus_tag="CPT85_00825"
     CDS             complement(24961..25761)
                     /locus_tag="CPT85_00825"
                     /inference="COORDINATES: protein motif:HMM:PF01618.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility protein A"
                     /protein_id="DAB27114.1"
                     /translation="MNFSAIIALVAAVLLILASHRADGESMVSLLQPSAFMIVLGGTF
                     CAAVVNFKPSTLMTALRSSVDVFLEKQPSQIKVIDEIIYLAHQAKMKGLFYLNNLVDD
                     IQDPFLKRGVQLSIDFNNPQMIYDILKAEISYDEEEELINSRVFEALGGYAPTFGIVG
                     AVFGLIQIMGYIQQPDILAQGIAVAFVSTLYGVGFANLLFLPVAGKLKMNTRERILLK
                     EVVLQGIVSIQMEESPMVIEEKLVAYLKYHNKTHSIENRKQTGLYGLR"
     gene            complement(25999..27786)
                     /gene="typA"
                     /locus_tag="CPT85_00830"
     CDS             complement(25999..27786)
                     /gene="typA"
                     /locus_tag="CPT85_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_924466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="DAB27115.1"
                     /translation="MDSNKLRNIAIIAHVDHGKTTLVDCMLKQCGVFRQNEVVQERIL
                     DSNDLERERGITILAKNVSVHYNGYKINIVDTPGHADFGGEVERVLGMVDGALLIVDA
                     AEGPMPQTRFVLQKALELGIRVIVVINKIDKPAADPDETLNKVFDLFTELTDDEYLID
                     FPVVYASSLHGFAKKELEDESTDIIPLLDCIIENVKSPVADASKDLQFHVTTLDYNEY
                     VGRIAIGRIVNGSMKSQEQVSHIQTDGTISKGKIIKLFGFEDLGRVEIKEASAGDIVG
                     IAGFPDIQIGETIASLDNPQALPLIKIDEPTLQMNFSVNNSPFAGQEGKFVTSRQLRK
                     RLYQELEKNVSLRVEDTDSTDIFKVSGRGELHLSILIETMRREGFEFQVSKPEVIYKT
                     INEETYEPYEDLLIDVPEECAGSCIEKLAGRKGEMLEMQAVGSRSKMRFLIPSRGLIG
                     FRGEFIRMTRGEGIMNHTFAEYKPYAGDINRQRMGSLIAHEEGEAVPYALAQFEDRGV
                     FFVTPKTRVYRGMIVGECNRAQDIAVNVCKTKKLTNMRTATADVMVTLQAPRNMSLEE
                     CLEYISDDELVEVTPQNIRMRKYDLVKLR"
     gene            complement(27896..30712)
                     /locus_tag="CPT85_00835"
     CDS             complement(27896..30712)
                     /locus_tag="CPT85_00835"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27116.1"
                     /translation="MESRTRCXXXKQYDEAMAEYATVSMLDAKNKQIHDILKDSMVLV
                     KGNNENAVDPSIREAGEKRLETDLLTVLKSLYGNDEAKINAQLQAVSDGAVGYKDGKL
                     IYNEFSKNNKSYALLNTAQKFLDKVDANYEKVKGQYSVEDYKNKMASAYEQAYGRKNA
                     AQLAKAFENDQEAVVGKVRTGVEYAGMGVMVAGMFICTPMALAGGLTASFGGIGVEAL
                     NEATRKQGLSEEAKQKITQELMTNAALFAVGGVAGKMGSSAKAALLAQKCPTLMACIA
                     DIGVDATMSMLGDMVLTGEIDIEGEGLSQVMSILAGHIRAGKFGKSAISRQDLSPSKN
                     PAFNRALEEMKRTDPEVYKDYELLRNKNMLPDNIANMFMNPKNGKINENLKKDISKMA
                     DCVRKGIDPKDAFVPKMKNLEQASKMKKQGEVFSLEGTNDLYIMDETGPVKLDMDRDT
                     YYSLFPPLQQYCTNQGALGDCYFISAVLDASMNNPKAKVEFLKMFRQDGNDIIFENKF
                     SDNPDLDNFPAEIRFKNAQKRTYTGQKGLAGSIGMQIAEQAYGYKLAINILASEMEYN
                     NVPKEQREKMYKELQKVFENPDYKPSKELNEMLADIMKNDYEDKDKYKNITADTPNLV
                     EKFREYAIGNGGNPTSTIMDFFGLDSSSVRIENISSAQRIEDVLKAHKSDPNVIMTAS
                     TDFKTKMPSELKMLFGINDDGKNILVSNHAYRIESYDVDKKTVSVVNPWDTTKTVELT
                     FEQFAKYFDSVAFVDLSKKTASTLSSEMKSKAQELNIPIKAKSGRFYSSEEFIEKYAE
                     KLEKEKHLSRPKTEIIGADYDYKKEKVFWENEAAAELLHKIDNVWVRKAVLHALVSNC
                     EVNSPEFKKLIKNLEAIIKNSDIEVLTMLDILDVKHSDFEFMIEKAVEIIPKLKQKGS
                     DYDIETILLNISKENYDEMKKLWE"
     gene            complement(30682..31584)
                     /locus_tag="CPT85_00840"
                     /pseudo
     CDS             complement(30682..31584)
                     /locus_tag="CPT85_00840"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    30685..30691
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    31564..31577
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT        10074 a         5978 c         6029 g         9616 t
ORIGIN      
        1 aagggctgtt taagctttat gatgactttg tagttaacaa caatctttgc tatcagcatt
       61 gtgttgatat tgtgtgttgt gcaatgatga aaaatcacac agcaggagaa atcgcaaagg
      121 ccagaattgc ttttaatgag aaacagtatt tgttttttga aaacatagca cctataacaa
      181 tggcttttgt tgagccgttg actccaccta aaattttgga aaaaagtgca aaatttaaag
      241 aggatgcaat aaaaaaaaag aagccgatga agaaagcaat gaattagatt ggataagcat
      301 ttacaccacg gcgacatgta ttcttggctg gagtgatagt gatttttggg cagctacgcc
      361 aaggaaatat tttgctgttt tatacaaata cagtgagatg aagcattttt tgcaagctcc
      421 gtctgcgcct caggcactgg ttggcaagca ggcaattaat gctttatcag aattggcgtc
      481 acgaattagg taacatactc aactctttca tattacatac tccttttctg cctccgtttt
      541 taggagcggg ggcatttttt tgattttgga atattatttt gcttcgcgag tcattactag
      601 ttcgcctttt tcgttgtagc agttattgcc tttccagtga gcgattaatt ttttgtttaa
      661 atcaaaaaca aaactttcat tatttgaaat aaataaactt attgaatcca atattccatt
      721 tctatcatat ttcaacactt ttatcggata ttttttatta atagaaaaac taataaaatc
      781 taatttccca ttaatatcat agtaaaattg cacagattta ttttttttat aataaatcgc
      841 ataagtttta tcagaaaaaa aagtaatata tcggtctcta atcttgacct tgtttttatt
      901 cataacattt ttatttgcta tgtaattgta atcagaaaaa taagatgcat aatcactaat
      961 atttatactc aatggtatat ttgaaaaggc ttcagttcgt gctgtttcta ctgtgtaact
     1021 tacacctcct tttattgtaa aggcagatgt aataaggcac ataagtataa aattaataat
     1081 tattactagt tttttcacaa caaaattata acatatagaa aggtacacac aaaatgacga
     1141 aaagtattta tacagaaata catgaaaata gtaatttcga aaaattttgg ccaatgttaa
     1201 gagagaattg gaaaaatcag gtacacagtt tggcgactct attaaactat tgaaagacac
     1261 ctgggctaag cagactaagg atatcaactc ttttgtttcc gctttaaaag accaaaacgg
     1321 aaaagttgat tttaaaaatc tgctctctgg tgggttgtac aacacaaaaa agcagatttc
     1381 atttttcttc gcgagtcatt actagttcgc ctttttcgtt gtagcagtta ttgcctttcc
     1441 agtgggcaat aagctttttg ttaaggtcaa atacaaattg ttctttcgat gaaatacaat
     1501 aggaaacact agttaaaaca cctttattat catagataac acttttctca ggataacctt
     1561 tttttagcaa tatctcaact tgaactaaac taccattagg atagtaataa aaagtttctt
     1621 tttgatttaa taaattatca atgacatata caccatcaga aaaaaccaaa atacggatat
     1681 ttttataacg aagtttgttt tgtgctatta aaagtttatg tttttcataa ttaggatcta
     1741 ttaaatattt tttaaattgc tgaatatcta tagtagtact tatattatta aatgattctt
     1801 cccgtgccat atcaactgta tattctattc caccagttat agttaaagaa tatacaggaa
     1861 aactaaataa ctgcattagt aaaaaaacga atactaactt tttaagcata acaaattata
     1921 acattagaaa ggaaatatat gaccaatgga atttcgaaaa taatgcttca aattaatgcc
     1981 gagtatctat caaaactccc ttgtcatcat agcagttatt tcctatccaa tgggcgatta
     2041 gttgtttatt cgtatcaaat ataaattgtt cattggaaga tgtatccaat gttacactat
     2101 ctaagattcc attaatatta tatgtaactc tttgtttagg ataagaggaa ttaagatcaa
     2161 tatctatata acataatttt ccagatgaat cataataata agcatgactt ggttgatttt
     2221 tgtatcttat tgcatattca ccttttgaaa acttagttag atatctattt ttatatttct
     2281 ttttatcttt aagcataact ttttgattga tagcaaaatt cttatcgata aaaaattcct
     2341 tgtatttata aatgtcaatt ttataattta cattttcaaa agcaatttgt cttgctttag
     2401 acacggtata tgatattcca cctttgattg tataagcatt aatatgcaaa ctactaaatg
     2461 cgaaggtaac aagaaaacaa atcattataa ctaatatttt tctcattata taagtataca
     2521 tcaacataga aaggaaaacc catgacatca acattaaaag ataatatcaa ttttgaccaa
     2581 tcaaatctcg aaaaaatttt gggaaatgtt aagaaaaaat ttgaatttta gacatcttct
     2641 ctccgataat ttgagtaata gaaaaaaccg atttcatttt ttttcgcgag taattataag
     2701 ttctccattt tcgttataac aattattgcc tttccagtga gatatgaatt ttttatttgt
     2761 atcaaaaaca taactttcac tactagatac agctaatgct gttgaatcta attttccatt
     2821 tttgtcatat tttacaatct ttattggata acttttatta attaaaaaac ttatagactc
     2881 caatttccca tttttatcgt aataataaga gatacttttg ttatttttat aaataacacc
     2941 atactcacca ctagaaaaaa ccgttaaata tctatctcta aagtacgatt tttttttatt
     3001 catagccttc ttatttgcta tgtaattggg atcagaaaaa taagatgcat aatcactaat
     3061 atttatattc aatggcacat ttgaaaatgc ttcagttctt gctgtttcta ctgtgtaaga
     3121 taatccacct gtaagtttca gtgcaaaaac aggttttatt gtcattgaaa ttatcatcaa
     3181 tattaaaatt aaaccttttt gcataacttt tacactcaaa ctaatactct tcatttctag
     3241 tcattattaa aataccattt tcgttatagc aattatggcc tatccaatgt gctataagct
     3301 ttttattagt atcaaagaca tactgttctt gtttattaat ttcgtacgca actgaccgaa
     3361 aatttccatt aatatcatag gatattgact ttttaggata attattagta tctacacaaa
     3421 aaatgattac ctccaatttt ccttttgaat tgtagataaa ataaggattg ggagcttttt
     3481 tcaataatac agaataactc ccatccgaaa agatttgaat ttttttatta cgaaaattaa
     3541 atttcttttt tgccaccgcc tttttattgt cttcaaaatc ataatctttt aaatatggtg
     3601 catatttaga tatatcaata ctttttttta caccttcaaa agctaaacat cgaacagcct
     3661 ctacagtata gaccacacct gcttttaatg tataagcaaa gactggattg catagtaaca
     3721 ctaaaattaa taaataacta aactttttca tttttttagt ataacacatt taatagaaag
     3781 gaattttatg gaatacatta agtataatga gcattttgac caatcaaatc tcgaaaaaat
     3841 cttggcaaat gttaagaaag aatttgaaaa atctggaaag cagtttaatg atgttttcaa
     3901 atcttttaaa gacacttgga acgagcaaac aaaagaaatc aactcctttg tttcagggtt
     3961 aaaaaatgaa aacggaaaaa ttgatttcaa aaatcttctc tccggtgggt tgtacaacac
     4021 aaaaaaacaa atctccagca aatatgatag tttgcgcagc ggtattgatg cagaccctaa
     4081 tttatctcag gctcagaagg attattacaa aaaaagatat aatatgtttg aggaagaaga
     4141 acaaaaagaa gcttatgaaa acagtataac tggcaaggct acaaaaaaat tatcaaacga
     4201 attttctgac gggctatctg acatgatttc aggttacaaa agtttttccg atgtcatcaa
     4261 agacatgaca ggaagtctca cagattttat gattaaacaa ttcaccgagg ctatcagcag
     4321 tctcttgttc aacgaggcga catctgcttt attcaacaat ctgcttggtg caggtttgaa
     4381 catggccacc ggaggagcca gcagtgcttt aggttttata ggcaagttat tcagacatca
     4441 ctcagggggt attgtgccat caggagctaa ctattctctg cccggtactc aagaacagct
     4501 cgcattgtta aaaggaggag agagagtatt gagtccttca gaaaatgtta attacgaaaa
     4561 ctcacaagct gcttcgcctg tgattgtaaa ctctttcaac atcaaagctt gggactctaa
     4621 ggatgtaaaa aaatatttat tagaaaacag acaattatta aaccaaatca cttttgaagg
     4681 aataaaaaac aacaatgcac acttaagaca cattgttcaa aatgcataag tgtatagaaa
     4741 ggaatgttat gaacaagaaa attgagcttt tgctaaatga tattggccgt ccttatgaaa
     4801 tgtttaatca ggatggcaca tatcagggct gtttttatcc ggtacaattt ttgtaccctc
     4861 ataaaccaag atacaaatta cgaagtaaaa atgacgataa aaattattta tatggtttgt
     4921 caaaaattaa aaagcattgt atcgaaatac cccctgccga attacaggca ggggatatta
     4981 ttgcaacaag atttcgcgat gagttgcatg ttgcaattta ttatcaatac ggaaaaatta
     5041 ttcatgtgtt taaagaacac actcttcaaa taggtcgatt gaagatgttt aaagaataca
     5101 aatgttatag ggtaatttaa aatgattctt tcttctgtta ttacagttac agcaagtatt
     5161 gtcagcggat tattaggctt tacgggaact attgccgcta cagtttgcac aacgcttggt
     5221 tatcttggtg caattgctat ttatggcggt gctgcgttga gcatgagtaa gaaaaaagcg
     5281 aaaggtctca actctgcaac atacgatggt cttttgcaaa cccagacgga tcagaatttg
     5341 cctttgccac ttttatacgg aacctgcaag cttgccggta accgtatttg gcaagatgaa
     5401 aacgcacaga ctcatgttaa aagaatcgtt gcttttgcag aaggcgagat atgtgagttt
     5461 tcggacatca aactcaatga cattcccgcg gggcaaattg ccggtattag cataaaccac
     5521 tattatggta catctgacca gatagtagat ggtatagtgg gcggtgcaaa tcaaagtgag
     5581 cgggctcaaa aggttggttc attaagaaat gtagcttatc ttgctatttc ggtaccaaga
     5641 agtgcaaagg ttgacataaa ctacaacctt actgccgttg ttaagggccg taagataagg
     5701 gtttacaaaa acaaatacga atatgagata aaatattccg aaaatcctgc ctgggttatg
     5761 tttgattttt taagctgtta caacgggcta gggctttgca taaatgagtc tggcaacata
     5821 agtgagactc ttatttcaga gctttttgac cttgagagct ttatcgagtc agcagcatat
     5881 tgtgacgagt tgattgaata caagcacact aatgaaaatg gtgaagaaat tatcgacatg
     5941 gttcctcgtt ttacgttcaa tatgatcttt gactctcaaa cctcggcgag aactcttatt
     6001 gatgaaattt atcgctcttg cagaggaggt ttattcataa aagacggaag gctgcagttt
     6061 aaaattgaca aagcagaacc tgtaagcaga atatttactg cagaagacat tataaaaggt
     6121 tccgagactt ttcaaactat tccaaaagaa gagcattatg acattttaaa atgcacatat
     6181 gtttctccgg atcatgaatg gcaaaaggtt gaagcaacag cggaaattcc agaatacaga
     6241 gatggtgtgc caattgaaca cagtgtcaat atttacagct gtacaagctt taatcaggct
     6301 tcgaggcttg cgtggtatta tgtcaatgca aagaggattc agccttattt tggcagtttc
     6361 caaactgatt acaagggtta cgaccttgaa gttggtgatg taataagctt tgacagctta
     6421 ttgatgggcc tggaaaaata caaggtaaaa gttgtcagtg taacagacaa cggagccgga
     6481 attttcacta tcgagtggag aacctatgac gaaaggctct atacagatga gcttggcagc
     6541 aaagagccta aagtgcttgt cagcacatta acagacgtag caaaataccc tgatgacgta
     6601 caaaacttta acgttgttca gtcaaacaat ttattcaatt ttgtatggca gccaaatgcc
     6661 aacaatactg acaagtacga aatcaggatg ggtgatacgt gggaaactgc ttctgtcata
     6721 aaaagcagca ttaccgaaaa caaatacaca atggaaatac ctacaaacgg tcttttcaag
     6781 ttctggatta aagcctttaa cggttataac tattctaaga atgcaacgct tgatgtaata
     6841 aatgtggaca gtgttccaag ccttaatgaa attgttaaga ttaacattct ggaagacatt
     6901 gccggcacat tagacgaaaa tctcagggta tatcacaaca ccatcaagct caaagaaatt
     6961 gatgaaaaat ggcatacact tgaagaaaac tggtcaacaa tgtctggtta ttatcaacaa
     7021 ggcggcagat ggggcacaaa cactcttgca aatcagggtg tatacataag ccaggtgtat
     7081 gacataggtg atgatttaga gagcattgta tcttttgatt acaaattcac ctctgcagac
     7141 actcaaaatg atgtgctcat agaatgggct tattcgtctg acggagagac attcacggat
     7201 tggattattg caaataccgg taaatttact ttccgttatt gcaagttcag agcaacacta
     7261 agggcagtta acaatgtaca aactgtattg actgatttga atgtggctat tgatgtccct
     7321 gacaaagatc ttgatatgga gcttgaaatc acagattctg aagggctgcg tattgaatac
     7381 agtttcatac gtccaccatc tattgttgct acggtaaatg ataacaacga cgcatatgtt
     7441 gtaattacag aaaaaacaaa tacttacgcc tatatagttg catatacaaa ctcgggtgaa
     7501 ttaacaacct gcaagttaag tttgcgtgca aaaggctatt aggacaacca aaggaggaaa
     7561 aatggcaaat tcaaattatg cctggacgga taaccctacc gtttcaggcg tttctcaatg
     7621 cgatacggat gtattaaacg attgcttaat gcatttgaag tacaaccacc gcacaagcgg
     7681 tggaggattc agtctttttg acacaaaaat cactgaccat gttttgtcag gtgatgaagc
     7741 tcttggatgg gtaattcaag gcggtgttgt tacaatgaca tatcctgatg cggttaatgt
     7801 cattaaagaa gaatattcca acggggtaga atgtacggac ggagatgtaa cttacatgtt
     7861 atctccaaca ggcagaagaa tcgccgatat ttcacaatat gaagctgtag acagacttta
     7921 tgagacaaaa ggacacgcac cttattatgt ttatgatgct gttaaccaac agttctatct
     7981 acctaaaaca aaactattgc aacaatttac aacaaataca gatctggtaa atacggttaa
     8041 tgaagcaggt cttcctaata ttaccggtac attcggcggt accagagatg ttgcagtcgc
     8101 tccaacaggc gccttttaca gaaacggatg gactccagct cccggagccg gttcagatac
     8161 atacgcaatt gcatttgatg cttcccgctc aaattcgtta tacggtaaat cagacacagt
     8221 acaaccacct tctgttaata tgctgattta ttacaaagtt ggtgaagtcg ttgttaattc
     8281 agatctcgct ttgattgatg ctcaagaaat gattgaagac gcacttcaag aagtagacac
     8341 aaaaatcaat gacggattaa gttcccttgc aaatgcttcc gatgcacttc gccaaacaca
     8401 ggttacaaat tgtattttgg aagcgcctaa caacataaaa atagatatta atgaaaacgg
     8461 ttatcttgtt ttaaaatcag gaagcacact tattattccg gcaggtcttg acgatgaagg
     8521 caataaaaag tttgaacaca agacattaga gagtgatgtt gtatttacaa atacagatgc
     8581 tataaccggc aatttaaaag attttatgcc tattgtatgg tacagcaatg atgcaagcac
     8641 agctcacagc attggcgggg tttgtgtatc gcaaatgttt gcaggagaga ctgctcctac
     8701 aaacgcacaa gacatgtact ggtatgatac agcaaacaat ctcattaaat tttcaggtga
     8761 cacaggtgct agctgggaat ttgcaatggc aagttttcct atttgtcagg tagatgtgat
     8821 atttgaatca gcttctgtga aatattttaa ttatccaaaa gccatattca gccattgtgg
     8881 ttttataggc agtgcttact ggctggataa agaagtaaag tatcttgcgc caaacggcaa
     8941 aagtgaaacc ggcaccttaa acaatatcga aggtgttaca caagatgtac aaatccatat
     9001 tattactgat gaagaatcca acaacactgc aagcaaatgc atggcctggg tatcatccaa
     9061 ttctataagc tggtggggca atgcttctat aaagacctct tacacaaaac caagtgttac
     9121 aggatacaca agatactttg acagtaatga aaattactgg aaaaaggcag accttagcac
     9181 aacatttaca aatacaaact tgtgcccgtt tgcaacattc aatataaaca cacaaaacca
     9241 gatattatct atgcagcctt atgaaataat gcaagttgca ataggtaata acagtgtttt
     9301 ttggcctgat tatacagctg gtataactat ttccgcattt ccgtacactg cagaatatga
     9361 cggctggcta acagctagcg ttatcggtga ccaaggaacg gggcaaaatg gctatttgca
     9421 aataaacggt aacactgtgg tacattcata tggccttgat tatacaacat cacaatgggt
     9481 tatacctgta tcacgaggcg atgtaataac agcacatcag gtcggttcag taactatatt
     9541 cccctgtaaa ggaggcagat aatgattaaa tatgcaaaaa ttgtaaataa caaaaccggg
     9601 ctctgtgaag taggaatagg cactaacgaa gaattttatg cctctcaagg aatgacaaaa
     9661 atggaggtag aacaatctga agtcgactct ttatggtatt tgagcgacaa atgtcctgtt
     9721 aaatctgaag agcaaaaact tgaagaagct aaagaggcta aaatccagga gattactttg
     9781 gccaaagaag ctgcttttaa ggcaggtatt tattttaacg gtgcccatta tgactgtgat
     9841 gacagagcac aagacagaac cggcaacagg cttttgttgt tgaatgccat gcctgtagtc
     9901 actctggaat ggctggatta tgattacaaa cctcaattgt ttagtgcgca agatttccaa
     9961 acgctttgtg cagcgatatt tgagcgtatt cagtttatag agtttaaaac aggtcagctc
    10021 ttgcaagcag tagaaaacgc ctctgatatt gaagaggtta atgctatagt catcgatttt
    10081 gagcaaaaag ataacgacga ggaggtttag actaatgtca tttaatttta atgtacaggg
    10141 tattacaact gttgataata cacaaacagg cagctctact gtcatagata caatatcacc
    10201 acaaaatatt aaaggattgt gctattggat agacggagaa ataaatacaa gaaaaggtca
    10261 ggacagaagc tataagggca tgcaaaacct tgttggcgga gattatattt ctaaagtccc
    10321 ttccggaatg caagaatcaa tgaatgggac acctgttttt ggagataaat ggtgtactct
    10381 tggcggtact ggctttatgc caaattttgc ttcaaccgaa caaacaatag aactgtgtgt
    10441 tgagtttaac gccaagccgt atacttttag caatattata tatgttttgc atgtaccagg
    10501 cgatatggaa atatggtttg gtgacaacca agacacaatc gtcagaagat taactttcca
    10561 tttatttgaa tcaggtgcag tgtctttgga tgttaataaa gaaatggcag caaattacaa
    10621 tcaacgactt tacgctgccg ttagattcaa aacaggcaac cctccagagg cagaattatt
    10681 tattaacgga atatcaacag gagtacctgt cacaggcaaa aatacgacac tttcttcaag
    10741 cggatataat tgcggaattt gtggacttgg aaacacatca acatccagcg ttgttcctac
    10801 agaaagcaac aaaacgccta acggagcatt ttacggttct acaacaaagc tatatacgct
    10861 aagacgctgg acaagatgtt taagtaacga agaaatttta caaaattaca aattagatta
    10921 cagcagattt aactaggagg aaaaatggca aatttgggaa ttattgaaat ttacggcaac
    10981 gaaggatggg tagatgccga agtaaaaatg gcggaaaaat acgaaggctt tgcatttgaa
    11041 gccggcaaac agtatacctt acaagttata ggcaacaaca agatttgtat cacagacgga
    11101 acaacaccgg aagaagaaga ggggtttgaa aaaagcaaag atccgtttgc ttacacacat
    11161 gctgcaagca caaaactgtt tgtaaaatgc aaataccaaa gacccttcac aagcatacac
    11221 gttaacattg cagattagag gtggaattat gaacaaaatt cttgaaacta tcttaagata
    11281 tctgggacag tcctctacgt ataaagggct gttttccgta cttgcagcgt ttggtgtggt
    11341 attaaaaccc gagatggcag acgctattat tgcgtgtgca ctgggtatta ttggtttgat
    11401 taacgtaata atagatgacc acaagcatac agataacaag ggggcggagg cataatgtac
    11461 tccgctctta tcacttcttt aagcaatttg tttgcaaggc tttttgaatg gaaaacaaca
    11521 aaaacgcagc accaatcaga gactgaaatt attaaagaca aaaaagatta taaaaaagcc
    11581 acaaacattg cagaaaaaat tattgatata gcacagcagt acaaagcgga catgacattt
    11641 gcgcacaggc tcaagtttgt ccgccttgta caggcgttta aaaaatacaa ctagcaggaa
    11701 acacaatgga taagattata gaatacgcac caataatact cgtactggtt atgtttttaa
    11761 tccagtacaa aatatttgtc acaccggcac agattacaga gctcaagtct aatttaatcg
    11821 aatatattgc agagcattat gtatcggaaa aaacctacag agacaataac ataagcttgg
    11881 aaaaccgtgt ggataggata gacaaaaatg taaatgatgt aaaaactctt ttgataagca
    11941 ttgtccaatg gcacggaaac cccaataatt aatctttata tcaggggcag gaaaatggat
    12001 gaattactca attttaaaaa agcacttggg tttgtactta agtgggaagg cggttatgtc
    12061 aacaatccgc acgataaagg cggagcaaca aacaaaggaa ttacacaaaa tacatacaat
    12121 acctggctca agagcctttc tcttgcgccg cgtgatgtca aaaacattac tcaaaaagag
    12181 gttgagcaga tatattacaa aaactattgg agaaaagcgg gatgtcacaa catgtcccca
    12241 aaatttgcgc tactggcttt tgacacagct gtcaatatgg gtgtagcaag ggtaaatcag
    12301 tttatgaaag cagcaggctg gaaataccct gaaaaattta ttgaagcccg acgcgcaaaa
    12361 taccacgagt ttgcaaaata cggcaatcaa aaaatatttc ttcaaggctg gctcaaccgg
    12421 cttaatgcac ttcaagacga attaaaaaaa atttcataac tcatatctta actacttgat
    12481 gcatgtactc tcactgccct gttcgttttt ttcgaacagg gcttttttta tgctgtaaaa
    12541 taattttatg caaatatact atgacatgtg ttttgaaaat ccgattgaaa ccgttatcgc
    12601 atttgataac ggctcattaa aacacgcatt aaacaaaatt gaaacacttt caaaaaaata
    12661 ttatcttctc ggatacattc gctatgaggc caaagatgtt ttcttaaaca agccggtcaa
    12721 aacagcacaa ccccctactc ctttacctat tttatatttt gaagcctatg aaaactttaa
    12781 accatatcac agagacgaaa acgcctgtgc attgtttgaa tcaaaaccct gcataagttt
    12841 tgatgaatac aaaaaagcaa tcgaaacaat aaaagaccat attgcacagg gcaatacata
    12901 tgaggtaaat tacacctgtg actggcttgt cacaacaaaa gcaaaaaacg ataaagaggt
    12961 ttacgacact ctgctaaagc agnnctataa cgcatacata aaaaacagtt acgaaaccct
    13021 gctttctttt tcacccgagc tgttttttaa gctggaaggc agaaaaataa taacaaagcc
    13081 aatgaaaggc acaatcaaac gaggaaaaac aaaacaagag gatgaaaaaa acatagaatt
    13141 tttaaaaaac gatataaaaa accgtgctga aaacgtcatg attgttgacc ttttaagaaa
    13201 tgaccttgga aaaatcgcaa aaacaggcac cgtcaaagta ccttccctgt ttgacataga
    13261 aacccacaaa acccttcatc aaatgacatc cacaatcaca gcagagctta gagacgacat
    13321 ttctttttat gatatttttg aagcaatctt cccctgcggg tcaattaccg gtgcaccaaa
    13381 aatcagcacc atggaaatta tcgacctcat agaaacaggc aagagaaata tctactgcgg
    13441 agcaataggt tttatcagcc ctgaaaaatg tgttttcagt gtgccaataa gaatactgca
    13501 aaaaacaaat gaacaaacct tcttcaccta tcgtacagga ggcgcaattg tatgggattc
    13561 tgacgtggta gatgaatggg aagaaacaat cacaaaagcc tcttttttga atcaggagtt
    13621 taaaattgtc gaaaccctga aagctcacaa caaggagttt ttgtttgcca aagaacactt
    13681 taacagaatg gaaaattcag cacaggctct gggttttaag tttaataaag aaatatacag
    13741 ccttaaacct gaaaaagacg gacttgtaag ggttttgctc tctaaaaacg gagattacaa
    13801 aatacaatac aatccgcttt tagaacctgc cacagatatc gcgctcataa gcccgataaa
    13861 aacagacagn nnnnnncaca aaacaactct tcgtccctgg tacgaaaaga gttttgaaaa
    13921 aatcaaaaca cgggaaatat acgacgaaat cttttttaac gaaaaagacg aactcacaga
    13981 aggagcaagg acaaacatac tgcttcaaat caacggcaga ttatacacac cgcccttaaa
    14041 atgcggactt ttaaacggaa taatgagaca aacaatgatt gacgaaggca ctgtgcaaga
    14101 aaaaatctta tacaaaaagg accttttaaa cgcagaaaaa atcctttgca taaactctgt
    14161 aagaggaata aaagaggtgc ggttaaaatg atattgatag acaattacga ctcttttacc
    14221 tacaacatcg tacagtatct acaagaactc ggcgtgacac cacgcgtttt taaaaacgat
    14281 gaagtgacta ttgaagagtt aaaaaatatt gattttaatt ccgtgattat ttcacccgga
    14341 cccgggaacc cttgcgacaa aagctctaca ggggtttgtg aggatatagt aaaagaattt
    14401 tacacaacaa aaaaaatact gggtgtatgc ctcggtcatc agcttatagc atctcatttc
    14461 ggggcacgga tagtaaaaga ccccgagcca tatcatggca agacatcaaa aatttatatt
    14521 aagcgtgagt ccaagctgtt taaagatatt ccaaacggtt ttgaagcaac acgctatcat
    14581 tcgctcaagg ccgttgattt gcctcattgc attataccgc ttgcttatac ggatgataaa
    14641 atccttatgg cgctaaagca cagagattat gaggtctacg gtgttcagtt tcaccccgag
    14701 gcaatattga cacaatacgg ccacaggctg tttgagaatt ttttaaatat tgtacttgat
    14761 acctaaaaaa tggtataaat atagatatat tggaattata aggaattgaa atgtttgatt
    14821 ttacattgtt tttaaaccct gtcatactgg caattatagc tttatttgca ggtgtggttg
    14881 tttactttat tnnctttatt tctaaagtaa aatacataaa ttcttcgctt gtgcatctta
    14941 ctaatgtgct taaggggttt aaaaaaggga atattgtata cagatttaaa gaactggatg
    15001 atatattctc caacaatcct tttatctcaa actactggat tgagtttaaa aacacccttg
    15061 tattcaacga gggcatatcc ctaaaaggca cagcagcaga cacttcatct attcaatgca
    15121 cagttgatgc gggatatttc tttaatgaag aaacactcgt taacagcaag ctcaattaca
    15181 aatttatttc ggctgtacct acaattttga cgggtcttgg gccgttgttt acgtttttgc
    15241 acatttcaat agctttttca aaagtcaatt ttgctacgca ggaagccact attgcttctg
    15301 tgtcttcgct gcttgcttcg atgaaaatcg cagcaatgat ttctgtagtt gcagtcggca
    15361 cttctatcat ctttatgatt attgaaagaa ttttgtacaa aaacatgtgc aaaacgccgc
    15421 taaacgcttt tcgtcttgag atgaataagc tttttgacag cataacttct gaaaaattcc
    15481 ttgtagacct cttgagagaa tcaaaacttc aaaacagtgc gctgaatcag gcttttaata
    15541 cactgcctgt acagatgaaa gaagcctttg acaaaagttt taaggaaagt cttgtgccgt
    15601 atctggacaa tcttattttt tcagttaaca aattgcagga aaatattaag aaaaaaggtt
    15661 cacaaggcat actggatgac ctttttggaa gcaatgatga agagtagcac gctatgaaat
    15721 acgcaagata ccgacaggac aatcaaaaca ccggtgatga caacgttttt tgggtaacaa
    15781 tgagtgacct tttgctaggg cttgtggttg tgtttcttgt gctgtttgtg tttgctatta
    15841 caggctttac acagaacaaa gtcaacgagc atgaaaagca gtatgaagta actgaaaaaa
    15901 ttgcgcagga actgcaaaaa aataatataa atgttgatgt ggacaagttt tccggccgca
    15961 tnnaactctt tgagctcaac agctgggagc tttcgccaaa aggcagagca tacatgtcaa
    16021 aatttgtacc tgtgtatttt aacaccatta tgaaagaccc tgatgtaaga aaaaatattt
    16081 cgcaaattat aattgaaggc catacggatt cacaggcatt tgcaggggca aaatccgttg
    16141 aagacaagta ttttaaaaac atggatttga gtcttaaaag ggcttcgtca gtggcacgct
    16201 acattgttta tgcaaattat tccggcaaag aaaaatacga aaacgaactt tttaagcttc
    16261 tgtctgtcga aggcaaaggc ccgtctgagc ctgttattgt taacggaaaa gaagattacg
    16321 caaaaagccg ccgtgttgaa ttaaagctga tgttcaagga taaaagtatt cttgactcga
    16381 taaaaaaata aacacagaaa ttcttgtatt ttcgcctacg cgtggtacaa ttttaatagg
    16441 aaactatagt taaaatcgag aaatttatgg gcaggattgt aatagataga gatgtgtgta
    16501 agggctgtta cctttgtgta aaagcatgct ctaaaggttt gctgaaaaaa agcaccgagc
    16561 ctaatcttca tggagatttt cctgtcgaat ttgataacaa agacaacgct tgcataggtt
    16621 gtgcaatgtg tgcaatgaat tgtccggatg tggcaatcag agaggtttac agatagtggc
    16681 taaagtattg gttaaaggaa acgaagctat cgcacaggcc gctattaatg caggctgtca
    16741 gtgctatttt ggctatccga ttacacccca gagtgaaatc ggagaataca tgggaaaaca
    16801 tcttccaaag cttggcagag tgtttattac tgcagaaagc gagctggctt ccatcaacat
    16861 ggtaatcggt gccggaacaa caggcacaaa agcaatgact tcatcgtctt cttgcggaat
    16921 tgcgcttatg caagaatcaa tctctgcaat gtgctgtgcg caagttccag gagttattgt
    16981 cagcgtaatg cgaggaggcc cggggcttgg caacattgca cctgctcaag cagactattt
    17041 tcaagcttta aaaggcggcg gaaacggaga ttacaagaca cttgttcttt ctccttctac
    17101 tgtgcaggaa gcaattgacc ttacttacaa ggcttttcat cttgctttaa aatacagaaa
    17161 ccctgttatg ctcttagctg acgggatttt gggccagatg atggaacctg ccgagtttgg
    17221 tgaatatcca tacaaagacc ctgatgtcag cgagtgggcg ctttcaggtg cagacaaccg
    17281 ccctgcaagg aatattgttt ctcttcacat gcctgaaggc gcaatggaag aacttacaaa
    17341 cagaattttt gaaaaatacg aacttgccgc aaaaaatgac acaatgtacg agtcatacaa
    17401 actggaagac gcaaaacttg ttttaacagc ctttggcaca gtgggaagag ttgcaaaagc
    17461 tgctgtagac agagcaagag aacagggtat gaaagtcggt cttttccgtc cgattacttt
    17521 atgtccattc cctgacaaag ctcttaacga aacagcacan nagcagatat gattctggat
    17581 ttggaattga acaaagggca gatgctcctg gatgtgcgtt ctgctgtatt tggcgcgtgc
    17641 cctgtagaat ttttcggcag aacagcaggc ggtttgctaa catctgatat gatttattca
    17701 aaaatcacgg aattatacaa aaaattggaa aacaaaacgg aagcaggggt cagataatgg
    17761 aaactttagt atacaaaaga cccgaatcac ttttaaaaga cggacatttt acattctgcc
    17821 ccggctgcgg tcacggcgtg gtactaagaa tcattgccga gcttattgac gagttcaatt
    17881 tgcaaaaaga cactattgca atttcgtctg taggctgttc tatctttttg gaaaaattct
    17941 ttaaccttga tgttgctgga gcttctcacg ggcgttctcc ctgtgttgca acaggtataa
    18001 aaagatgtaa acctgataaa tttgtattca catatcaagg tgacggagac gctgcgacaa
    18061 taggttttaa cgaaactatc cacacagctt gccgcggtga acatatcacc acaataatga
    18121 taaacaacac aaactttgga atgacaggcg gtcaggccag tgcaaccact cttgtcggtc
    18181 aggttacaac cactactccg gcaggcagaa aaccggaatt gacaggctac cctctccatg
    18241 ctgcggaaat cgttgcaaaa tgcgatggta cagcttattg cgcaagggtt gcaatcacag
    18301 atacaaaaaa tattagaaaa gctaaagaag ctttgaaaaa agcgtttgaa atgcagataa
    18361 aaggtttagg ctatgctttt gtggaagttt tggcagcatg ccccacaaac tggcacttaa
    18421 aacccgctga atctgttgag catatagaaa atgtaatcca gaccgttcat cctctgggcg
    18481 tgtttaagga tattacggct aaggagcaag tataatgcag gacatgagtg taataatatc
    18541 aggctttggc ggacagggtg cattgtttgc aggaattttg ctgtgccaca gcgcagtttt
    18601 tgaaggcaag cacacaacgt ggttccccgc atacggcgca gaaatgagag gcggcgctgt
    18661 aaattgtgcc gtgaatatct cggacaaaga ggttccctcc cccatcattg acaaggctga
    18721 cgctgttatt gccctcaatg acgcgtcaca ggaaaagttt gaaagcaaag ttaaaccggg
    18781 cggttttatg atagtcaatt cttctttgtg ccatttaaaa ccaaaaagaa ctgatatcaa
    18841 atacataaac attccattta acgagctggc tcaaaagctt acgcagccga cttttataaa
    18901 tgtaatggca cttggtgctt ttattgaaaa gacaaagatt ttaaaactcg aatctataaa
    18961 agaagtaatg aaagaaatgg ccaaaaccgt ttctgccaaa aaagctgcgc ttttgcccaa
    19021 taaccttgag tctgttgagt atggcgctaa cattatcaag aatcaattag ttactgtata
    19081 atcaaattat gaaagaaaca atcgaattta tccaaaaaca aataaaagat tttgtgcccg
    19141 agattggtat aatccttggc tcgggactcg gtgattttgc agacaatctt gaaggcgtca
    19201 ggataaaata ctctgatatt ccggggtttg agacatccac agttgccgga cacaaagggc
    19261 agcttgtatt tgcaaaggtt cagggtaaaa atgccgtaat aatgcaggga agataccact
    19321 attatgaggg ctatcacatc agccgtattg tttaccccgt aaaagtgatg aaaaagctcg
    19381 gggtaaaaac gcttataata accaatgcag ccggcagtgt aaacaaagaa tacaaagcag
    19441 gggatttgat ggtaatcaaa gaccacatta atttgatggg cgtaaacccg cttatcggtg
    19501 aaaacgactc aacacttggc gacagattcc ctgatatgag cgagatttac agaaagtctc
    19561 tttgcgatat cgcacaggca aaaggcaaag agctcggctt gaccgtacaa aaaggtgttt
    19621 atgctgcaat gagcggcccg agttatgaaa caccggcaga aataaacatg ctgcgcatta
    19681 tgggcgctga tgctgtgggt atgtctactg tgccagaggc tcttgttgcc aattactgta
    19741 ccatggaagt acttggaatc agctgcatta caaactctgc tgcaggtgta caccccacaa
    19801 gactttcaca tgcagaggtt gtggaaacag ctgcaaaggt aaaagaatcc tttaaaaagc
    19861 ttttaaacac agtgattgca gttnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnng
    19921 atgtccggca catcattaga cggcatagac gctgctcttg tgcatattga tgacgatttc
    19981 aactttgaat ttattcaggg gcattcaatt tgctatcccg atgaggtaag aaaaaaactc
    20041 cttgaaatgg caaataacaa tgcaacgact tcggatgttt gcaatcttga ttttgttgtg
    20101 ggaaggttgt tcgctcaatg tgccaatgag cttatgcaaa aagcagggct ttgtgctgag
    20161 gatgtagact acattgcctc gcacggccag acggtttttc atatcccgca agaaatcgaa
    20221 accggcggta taaaaacaag aagcacgctg caaataggaa atatctctgt tatctcgcaa
    20281 ttgaccgggg ttacannccg ttcaaaagac attgccgcag gtgggcaggg agcgcctctt
    20341 gtgccttttg cggatgagtt gatttttaaa aaagataaaa accgtgccat ccaaaatatc
    20401 ggcgggatag gaaatgttac agtactttca aaagactgtg acaccttcgc atttgacaca
    20461 ggcccgggga atatgctcat tgattactgt gtgcaaaagt tttttaatat gccgtatgac
    20521 aaaggcggtg aaattgcact aaagggcaag tttgatgaag attggctcca atcacttatg
    20581 gacgagctat attactctat gcagccccca aagtccacgg gcagagagct ttttaacaat
    20641 gattatgcac aaaaaattct caaaaacgcg cctgaaaaca agtttgacat aatagccaca
    20701 attaccgcac tcactgcaaa aacgattttt gacgcataca gacattttgt actgccaaaa
    20761 acttcgattc aggaaattgt tttaggagga ggaggggcat acaacaaggc gttaattaaa
    20821 tatttaaaca gttattttaa caacaccgtt ataatcaaga cacacaaaga ttttggcata
    20881 gacgacaagt ttaaagaggc aatagccttt gctatgctgg gtttttgtac acttaacaaa
    20941 aaatgtaaca atcttgagct ctgtacagga gcgcaaaaaa gagttatcat ggggttaatc
    21001 tcttatagct aagtacgggt aaaaaatgaa atacgacgat gcagcaaccg aacacatcaa
    21061 tcgtgatact tttaatatag atatagtcgg aacacatgat atcctcacaa tgattaacaa
    21121 tgaggatatg aaagttgctc tggctgtaaa aaaatctatt ccgcagattg ccaaaggtgt
    21181 tgatattatt gtacgaaact ttttgcaagg aggaaggctt ttttacgtcg gtgcaggaac
    21241 aagcggcagg ctgggtgttt tagacgcatc agagtgcccg ccaacgttta atgttgcgcc
    21301 tgatatggtt caaggcgtca tagccggcgg cataagagcc cttaaagaag ctgtagaagg
    21361 agccgaagac tctgaagaga tggcactaca ggattttgaa gactgtgata tatgcgacac
    21421 agacactatt gtaggcattt cagcttccgg caatcccaga tatgttatca aatttttgca
    21481 ggtggcaaag cttagaaaat gcaaaaccat tgttgtcaca tcaaacccgc aggcaagaat
    21541 gaaagattac gcagactgtt ttatctgtgt agaaacagga gctgaagcta tatcaggttc
    21601 tacaaggatg aaagccggca cagcacaaaa aatggtgcta aatatgctct ccacagcttc
    21661 gatggtaaaa ataggcaaaa cttatcacaa cctgatgatt gatgttaccc ctacaaacga
    21721 aaaactaaaa cgaagagctg tcaccatagt aactgaaatc tgcggctgta aagaagcaac
    21781 tgcaagaaat gtgctggaag caaacggtta caaaacaaaa cacgcagtgt tatatattct
    21841 atacgggctt gattatgaag aagcagacaa attgctcaag cagcaccatg gcgtgttgag
    21901 aagaattttt gaaggttaac ctttatatta aaggcttttt attctctctt cagggtctgt
    21961 aatgcttgtg atacgaagcc cgaagttgtc ttctataaca acaacctcgc cgtttgcaac
    22021 gtgttttccg tttgcaaaaa gctctaccga ctcaccggct actttatcta attcaatgat
    22081 agagcctctt gtaagctcca atactttttt aacaggcagc tggcatctgc caagctcaac
    22141 tgtcaattcc agcttgatat ccatcaaaag ctcaaggttt ttgttggtat cagtatttgt
    22201 cggtgtatag ctgtcaaatg gtgtaaattc aacaggacgg accgttacag ggccgtcatc
    22261 agctgctgtt tcagcctcat taagatgtac ttcttcttgc gaagcattgg caggtatgcc
    22321 ttgcatttca ttaaagtcat aatccacagc attttcgtta agctgttgtt gtgtttgaaa
    22381 atccataccg ccatcaccag ctgtaggcat atcatcatct aacggcatat tcattgcagg
    22441 atttaagccg ctgatatcat cgtctgctga tggaatttcg tttttattaa aatcatcatt
    22501 ttgcatatta tcgtctgaca tgaaaaatcc tttctaaaaa taccgtttga gtgcgtccac
    22561 gtagtagtca tacctgtctg tgactttgac acagatttta tcttttattc gtcccggacg
    22621 ggcataaaat tttctttcgc cattgacttt gataatcaaa tcctctgtag ctgcattatc
    22681 taattttaat acatcgccct cttttaaatc aagaaactct ttgagcgaaa tatctgtttg
    22741 accgaaaaga acattgatat caacaagaga agtatcgagt ttttcaatca ttttctggcg
    22801 ttcttcgctg gttgcaataa taccttttgt ctggaatatg tgctgggttg tcaactgaga
    22861 aagtatattt tccaaaacag gataagggaa acacaagctt atcaaaccgt aatgtttacc
    22921 cgagatgtga acctctaatg taataagagc aacaatttca ccggctgttg caacctgaat
    22981 tccggaataa ttgttatcca gaccaatgag gtgagattca acaggaataa tatgagacca
    23041 tgcgtcagca agggtttgga ttgtgcgttc aatcatcttt ttaagcagag attcttcaac
    23101 atccgtgagt tctcttggct tggcctcaac cgtaccaaca ccgcccagca ttctgtctac
    23161 aatacttgat aatacttcaa agcttatacc gaggagcacc tggcccggca gaggattgag
    23221 ctcaaaaatt gcaatagaga tagggcttgg cacagaacgc ataaactcgt cataagtaag
    23281 ctggtcaaca gacacaacat caacttcaag gtgcattctc aaatatgctg tcaaaacaag
    23341 cgcaagctgt cttgaaaact ctttgtggat atcctgcaaa cctcttaagt ggtcttttga
    23401 gaatttgtca ggacgtctga agttatagag tttgtagcct tttttgtgtt cgtcggtttc
    23461 atcgattccg ttgataaaga tgtctttatc cgcgtaatct tgcgggaaca tatctgtatt
    23521 attattgtta gctgattgaa aaccggacat ttacctctcc cgtcgggtgt tattgcatga
    23581 taaactggcc aaagcttacc ctgattactt ctctttctcc gtcaaaaata ccgttaaccg
    23641 cctctgcaat ctgctgtttt gcaagttctt tacctgcagt ggaagcaagc tcgtcagagg
    23701 ttttgcttgt caaaacagta ataacagcgt ctctgattgc cggtttatac tgttccattt
    23761 ctgccacaat tgctgctttg gggtctggtg cggcagcttc gccatgaccg ccgtgaccgc
    23821 ccgatttttt aggttcttct gcctgtgttt cgggctccgg atttgttatt tctactgcaa
    23881 catttgcttt gagatatctt ctcgggtcaa cgtcgctcaa gttcattgta aaatccccga
    23941 ggtccagcac aatacctttt tcgggtttat caagctgttc ggaatcatcc tctgcagctt
    24001 gttctgtagt aacagatttt aactgggttg ttaaaagatt tgattgaagg aaataattaa
    24061 caccgataaa aataatacac acaattgttg ttgtgattac gttaatcagt atggaatttc
    24121 ctccgctttg cggttcttta tcctttgttt caggttcttt tgcctgtgta ggtttagcca
    24181 tttttatctc caacctttag ttattctttt gtgtgcttaa tactattata tccactctac
    24241 ggttttttgc acgcccttga ggtgttttgt tgtcatctac gggcatatac tcaccgtatc
    24301 ccactgctga cagcctgccc ggagggaagc tgtgcgcttc tgttaaatat tttatgatat
    24361 ttgtggctct cgctgttgaa agctcccagt ttgacgggaa tttttcgttt cttatcggca
    24421 tagaatccgt gtgcccctcg attaatacag ggttttgaaa ctttgccagc gaaagcgata
    24481 ttttatccag agtagctttt gcctgtggtt ttattatagc agatccgggg tcaaaaagca
    24541 tagtatcatt taatcttatt acaacgnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnttac
    24601 agacgttgtc atgttgatat ctttttctat ctgctgcgca atttgttttg catccagtat
    24661 accgtctcca ccgtccagga tagtttttcc ggcattatca agtttgcttt gaggggttgt
    24721 ttcaccctgt gcatcctgct ggttatccgt ggtattttgt ttaatatctg ttgattgtgc
    24781 gggctttgaa acaaacactt tttgtataga cttgttaaca tccttaactt ttaaatcacc
    24841 catggagctt gttgcaaaca ttaccataaa cagcgcaagc agcattgtga caaaatccgc
    24901 gtaggaaata acccagcggt ttatatagtc attggagttt gagtagtagt cgtttttcat
    24961 ttatcttagt ccgtacagcc ccgtttgttt tctattttct attgaatgag tcttgttgtg
    25021 atatttgagg taggcaacga gtttttcttc aataaccatt ggtgattctt ccatctggat
    25081 agacacaata ccctgcagca ctacttcttt taacagaatt ctttctcttg tgttcatttt
    25141 taacttgcct gcaaccggca agaacaagag gtttgcaaac cctacaccgt aaagtgtgga
    25201 aacaaacgca accgcaatgc cctgtgcaag gatatcgggc tgctggatgt aacccattat
    25261 ctggataagg ccaaacacag cacccacaat accaaaggta ggagcataac cgccaagtgc
    25321 ctcaaacaca cgcgagttaa tgagttcttc ctcctcatcg tatgatattt ctgctttcaa
    25381 aatatcgtaa atcatctgcg ggttgttaaa gtctatggag agctgaaccc ctctttttaa
    25441 gaacggatcc tggatatcgt ccacaagatt attcaaataa aaaagcccct tcatttttgc
    25501 ctgatgggca aggtagataa tttcgtcaat aacttttatc tgtgaaggtt gtttttctaa
    25561 aaacacatcc acagaagacc ttaaagccgt cattagcgta gacggtttaa agttgactac
    25621 agctgcacag aatgtcccgc ccagcactat cataaaagcc gaaggctgaa gcaatgacac
    25681 catggactct ccatcagccc tgtgtgaagc cagtattaat aaaacagctg cgacaagcgc
    25741 tattattgcc gaaaaattca aaacctacct cttggatata ctatccccaa ttgttcccaa
    25801 atttaatcca gtgtcgtcat tgtcgactcg acttctcgag tcgtcactga ctcacctttt
    25861 ccaatgacac tcaaaaattt tgctcacgtt cgttatcgca aaattttctc ggacagtcta
    25921 tatattacta tgattccaca ttttgaggta taagagtata caccgaatag aggattttac
    25981 agcactgccg caagagagtt atcttaattt aacaaggtcg tattttctca tacgaatgtt
    26041 ttgcggagta acttcaacaa gctcatcatc agagatgtac tcaagacatt cctctaaaga
    26101 catatttctg ggcgcctgaa gggtaaccat aacatctgct gttgctgttc tcatattggt
    26161 aagttttttt gttttgcaaa cgtttactgc aatatcttga gctctgttgc attcacctac
    26221 aatcatacct ctgtacactc tggtttttgg agtaacaaag aacacgcctc tgtcttcaaa
    26281 ctgggctagt gcgtatggta cagcctcgcc ttcttcgtgg gcaataagag agcccattct
    26341 ctgacggttg atatcgcctg catagggttt atattctgca aaggtgtggt tcatgatacc
    26401 ttcgcccctt gtcattctga taaattcacc cctaaaaccg atgaggcctc ttgaaggaat
    26461 taaaaatctc atttttgaac gtgagccgac agcctgcatt tcgagcattt cgccttttct
    26521 gcctgcgagt ttttcgatac agctgcctgc acattcttcc ggaacatcga ttagaaggtc
    26581 ttcgtacggc tcataagttt cttcattaat tgttttgtag ataacttccg gttttgacac
    26641 ctgaaactcg aaaccttctc ttctcattgt ttcaatcaaa atactcaggt gaagctcgcc
    26701 cctgcctgaa actttgaaaa tatcagtaga gtcagtatct tcaacacgga gagaaacgtt
    26761 tttttcaagc tcttgataga gtcgttttct caactggcgg gaagtcacaa acttgccttc
    26821 ctgacctgca aacgggctgt tgttaacgga aaaattcatt tgcaatgtgg gctcatcgat
    26881 tttaatcaac ggaagagcct gcggattgtc aaggctggca attgtttcgc caatttggat
    26941 atcagggaat cctgcaatac caacaatatc gcctgcggag gcttctttaa tttccacacg
    27001 gccaaggtct tcgaagccga aaagtttaat aattttgcct ttagaaattg tgccgtctgt
    27061 ttgtatgtgg cttacctgct cctgtgattt catagagccg ttaacgattc tgccgattgc
    27121 gatacggccc acatactcgt tgtaatcaag agttgttacg tggaattgca aatcctttga
    27181 agcgtctgct acaggagatt ttacattttc gataatgcaa tcaagaagag gaattatatc
    27241 tgtggattca tcttcaagtt cttttttagc aaaaccgtga aggctgcttg catacacaac
    27301 agggaaatca atcagatatt catcgtcagt caattccgta aacaggtcaa atactttgtt
    27361 gagggtttcg tcaggatctg ctgcgggttt gtcaattttg ttgataacaa caataactct
    27421 gataccgagc tccagcgctt tttgcagcac aaatcttgtc tgcggcatag ggccttctgc
    27481 tgcgtcgaca atcaaaagtg caccgtcaac cataccgagt acacgctcaa cctcaccgcc
    27541 aaaatctgcg tggccagggg tgtctacgat gttaattttg tagccgttat agtgaacgga
    27601 aacgtttttg gcaaggatag tgatgcctct ttctctttcg aggtcattac tgtccaggat
    27661 acgttcctgc acaacttcgt tttgtctgaa aacgccgcac tgtttgagca tacagtcaac
    27721 aagcgttgtt ttgccgtggt caacgtgagc gatgatagct atatttctta atttattact
    27781 gtccatttta taccttattt tctgttatta atgtttgtgt aaccttaaca aaatcatata
    27841 acagacagat tttaaagtaa atttttagca ataaatcata aacgattgtg aagaattatt
    27901 cccataattt tttcatttcg tcatagtttt ctttggaaat atttagtagt attgtttcga
    27961 tatcatagtc agaacctttt tgtttaagtt ttggtatgat ttcaacagct ttttcaatca
    28021 tgaattcaaa atcagagtgt tttacatcaa gaatatccaa catagtcaat acttctatat
    28081 cagaattttt tattattgct tcaagatttt ttatcaattt tttaaattcc ggagaattca
    28141 cttcacagtt actgactaaa gcatgaagaa ctgcttttct aacccaaaca ttgtctattt
    28201 tatgcaacaa ttctgctgca gcttcgtttt cccaaaaaac tttttctttt ttgtaatcat
    28261 aatctgcacc gattatttct gtttttggtc ggctgagatg tttttctttt tcaagttttt
    28321 cagcgtattt ttctataaat tcttccgatg aataaaatct tccgctttta gcttttatag
    28381 ggatattgag ttcctgcgct ttacttttca tttcagaaga caaagtactt gctgtttttt
    28441 tgctcaaatc cacaaatgct acactatcga agtattttgc aaattgctca aatgtcagct
    28501 ctactgtttt tgtagtatcc cacggattta caactgaaac agtttttttg tctacatcat
    28561 atgattcaat cctgtaagcg tggttactga caagaatatt tttcccgtca tcatttatac
    28621 caaaaagcat ttttaattcg ctcggcattt ttgttttaaa atctgtgctc gcagtcatta
    28681 ttacatttgg gtcagattta tgtgctttta aaacatcttc aattctttga gcagaagaaa
    28741 tattttctat tctcacagaa gagctgtcaa gtccaaagaa gtccattatg gtggacgtgg
    28801 gatttccgcc attgccaata gcatattctc taaatttttc aacaagattt ggcgtgtccg
    28861 cagttatatt tttgtatttg tctttgtctt catagtcgtt tttcataata tccgcaagca
    28921 tttcgtttaa ttctttagac ggcttatagt caggattttc aaagactttt tgaagttctt
    28981 tatacatttt ttctctttgt tcttttggaa cattgttata ttccatttct gaagcaagta
    29041 tatttattgc cagtttgtat ccgtaggctt gttcagcaat ttgcattcct attgagcctg
    29101 ccagaccttt ttgaccggta taagtgcgtt tttgtgcatt tttaaaccgt atttcagcag
    29161 gaaaattgtc aagatctggg ttgtctgaaa atttattttc aaaaattata tcgttaccat
    29221 cttggcggaa cattttcagg aattcaactt ttgctttcgg gttattcatt gaagcgtcta
    29281 aaactgcgct gataaaataa caatctccaa gtgcgccctg atttgtacaa tattgctgca
    29341 gtggagggaa caatgaataa taagtatctc tatccatatc aagttttact ggccctgtct
    29401 catccattat atacaaatca tttgtgcctt caagagaaaa aacttcacct tgttttttca
    29461 tttttgaagc ttgctcaaga ttcttcattt taggaacaaa ggcgtctttg gggtcaattc
    29521 cttttctgac acagtcagcc attttgctta tatctttttt caggttttca ttaattttac
    29581 cgtttttagg gttcataaac atattcgcaa tgttatctgg cagcatgttc ttatttcgaa
    29641 gcaattcgta atccttataa acctcagggt cggttctttt catttcttca agagcgcgat
    29701 tgaaagcagg atttttgctc ggacttaaat cctgacgaga tatagcactt ttgccgaatt
    29761 tgcctgctct aatgtgccct gcgagaatag acattacctg tgacaagccc tcgccttcaa
    29821 tatcaatttc gcctgtcaaa accatatcgc caagcatact catagtcgca tccacaccta
    29881 tatctgcaat acaagccatc aatgtggggc atttttgggc cagcaaagca gcttttgcgc
    29941 tggaacccat cttgccggca actccaccta cggcaaataa tgctgcattt gtcatcaatt
    30001 cttgtgtaat cttttgtttg gcttcctcag aaaggccttg ttttcttgtt gcttcgttaa
    30061 gcgcttcaac accaatcccc ccaaatgaag cggtcaagcc tcctgcaagg gccataggcg
    30121 tacaaataaa catgcctgca accataacac ccatgcctgc atattcaaca cctgtacgca
    30181 ctttaccaac tacagcttcc tggtcatttt caaatgcttt tgcaagctgt gctgcattct
    30241 tacgtccgta tgcctgttca taagcagaag ccattttgtt tttataatct tcaacagaat
    30301 actggccttt cactttttca taatttgcat caactttatc aagaaacttt tgtgctgtat
    30361 tcaaaagagc ataacttttg ttgttcttgc taaattcatt atatataagc tttccatctt
    30421 tatatcccac tgctccgtca gaaacagcct gcaattgcgc attaattttt gcttcgtcgt
    30481 taccgtataa agattttagg actgtcaaaa ggtctgtttc cagtcgtttt tctccggctt
    30541 cacggatact tggatctact gcattttcat tatttccttt aacaagaacc atagaatctt
    30601 taagaatatc gtgaatctgt ttattttttg catcaagcat cgacacagta gcatattcag
    30661 ccattgcttc gtcgtattgt tttannnnnn nacaccgcgt tctgctttcc aaacatcttc
    30721 aaaagacata agctcttttg ccgaggttgt tttcataagt gctctgatag aattaggatt
    30781 ttcactaaat tcaacggaag atgaatctgt acccctgctt tgtatcagcc tccgtccttc
    30841 ttcgacaagt ttgtcaacct gggcggtaag ttttggataa tcttcattat tcgtatattt
    30901 tattttatca ataagagcat taagttcttc aggagtgtat tgagcaaaac gttcttcaag
    30961 acaggctctt tcttcgtctg tgaggtctct gcctcctgtc aacatatcta ttgcactaga
    31021 aatcttggtt ttccagtatt cttcttttgt cagcgtaccg tcttgagctt tttgaagcaa
    31081 gtctgcagtt gttttttctg cataaattac acggcataca ctgctcaaag acatttcagc
    31141 atcaaaatat tctttaacag agttgtaagc tttgctgata cagccctgct catcagcttg
    31201 agtcataacg acttcaattg caccgtttat attctcacgt atactcgcta tcgcattatc
    31261 ttgagattct tttacagcct gttcttgtgc attatttggc ggaagttttg ttgttttggt
    31321 gtgatttgaa gcggtgctgc ggcttgcagt tctggaacag tattgcactt tttctacaga
    31381 taaagacctg tcaagaccca gcccccagct ggcgtcatca gtatctacaa gaggtatttc
    31441 attgaatgag tattgtacaa atttagaatc tttggcattg atatcagtaa acagttttat
    31501 ttcttttgtt atattctgtt ttaatttgga agaaaaaggg tttatattta ttttttgttc
    31561 tttnnnnnnn nnnnnnnaag ccacaaagaa acatcagcaa gcgtttttgg attagacgca
    31621 ataagtttgt tttttgtatc tttagggaga tttaaattct ctatataaac ttttactaaa
    31681 tcactgaatc cgcctgacat aattgttttc cttttcctgc taaattctta atcgacagat
    31741 tttagaaaaa ccttaagctt aataagctaa aacaccttcc aatcgttaca aaagttaaac
    31801 a
//
LOCUS       DABS01000022            5948 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_18804, whole genome shotgun sequence.
ACCESSION   DABS01000022 DABS01000000
VERSION     DABS01000022.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5948)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5948)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5948
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            8..889
                     /locus_tag="CPT85_00845"
                     /pseudo
     CDS             8..889
                     /locus_tag="CPT85_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003349436.1"
                     /note="too many ambiguous residues; incomplete; partial in
                     the middle of a contig; missing start; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
     assembly_gap    491..503
                     /estimated_length=13
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1013..4840
                     /locus_tag="CPT85_00850"
     CDS             1013..4840
                     /locus_tag="CPT85_00850"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB27000.1"
                     /translation="MNIKSLNSTYNLKATNPLNKKNNHNQNPSFSGCVLTQDTAGNNI
                     YKIFVPNAPQGTKVEYVTMTKNKDGVYKAHSKPQTRYLPTGYQPLILTDKDINLDKNS
                     TLGYKITVPGSPLYRESCAADMDSGYYIANAPSDPNLSSPKVIEHIFVDAFNVKDDKA
                     LHSKRNHFNIMGGTINSVNEKIPALAEAGITDVLGNPLIGQDNKSSQGYWTTNPYQIT
                     RNLGTITDFKNLMVNLFRHDMRWIADGAFVNEGIEGIHIEDIANFGTQSPXPFVNYFE
                     TKDLDSLTAKFGIYSKNSNVNKHIHIQLVNAPYKINFVKDGDKYIEKDVKRVSYDSTK
                     PTYIQVFDDRLASEEQMNGTDIFDIYANKTTGDDFEITNYMGSVQPIHRKVTPKEVED
                     NYKKYKEARHYDKNIEFKNSLSRWTNFEFDISNKNSGISLWVGNADISKKRFVLPEQS
                     VLDQLKDKSRKPLIEAAPYQVQDDTVQVGKFWTNEVSRTLAEEAAREIGQKVNEGSSY
                     KDAIDILIKEQKLPQKAKIVYEKDDNGISALDNILEKDFFDENERNYKLKPFKMPESI
                     TDGLMAFPMDAIEFAPDLAGALSYPHIKNLAVTEDTVGLSRYDMYKMGDVYYNQMPER
                     YRAQYKKMDNVIANDMSVKTKDIINKLSEKLNIKMLDAKGELTQEGKEIYALIAADIA
                     KFLVISALAPKIQFKENDKFLEYDPDELRKISQNSLNLQYEISPEELAAALTNKIKKG
                     VNSISAEKQADFVNHLEKRLRSVNSDSINVARLIMEKTESGLNWRIDAAKDVAAPELV
                     EDARFDDNANKQAVMKFWNKFNEGTFEYNPKRYSIGELTNWPSSIFSEFKQKTGFTTI
                     SDYEYFYSSIPGLFGVNSEGVHTGSLSEVVQDKLFSKSGNVGYMDSGNEESVNYAHRF
                     VGNHDKPRVLHLLALDMLLFLNNKNEAMSKALVEGFHNTERYQALDDNFKASIYEVIT
                     KVLEKGKYLKNGKEVIADSENFGVRPFDFNIDLVIEQTKEKNAGFKHYAQNNPAEIKK
                     LKADVLQTILXKPALEKYRAIWFTMNALPGAPTNYAGDEFGMTGWETACKNEKQENRN
                     PIRWDRLDDNDYKFIKEYKSKIDDISKIRKKEAASALSNGSTIKLEDQPVQGERSAVA
                     LYRYNDKTDAVCVLHNAGFGGDRNLAGYDLHLNSIKLGGLPNGLIEGTIYRDALNPES
                     KYKVTNPYEIKKIDDNGNIQEDINLGNAGIILLREKDFKGKELSFKGRIENANVKLAN
                     TKFNIAAPSYKRI"
     assembly_gap    1816..1817
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    4134..4135
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4882..5141
                     /gene="ffs"
                     /locus_tag="CPT85_00855"
     ncRNA           4882..5141
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="CPT85_00855"
                     /product="signal recognition particle sRNA large type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01854"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01854"
     assembly_gap    5050..5051
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    5352..5378
                     /estimated_length=27
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    5652..5756
                     /estimated_length=105
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5836..>5948)
                     /locus_tag="CPT85_00860"
     CDS             complement(5836..>5948)
                     /locus_tag="CPT85_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004362650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="DAB27001.1"
                     /translation="LKKRGMKYMGTVIVYSYLQAIGIVDDHEKDCFKYSK"
BASE COUNT         2142 a          958 c         1058 g         1639 t
ORIGIN      
        1 atttgagcaa ggctcttggt ttaaccttat aaagccaacg gctgatgaaa ttaaacaggt
       61 tgccgctgca ttaaatattg actctgactt cttaagagat tcattagaca gtgaagaacg
      121 ttcacgtatt gagcttgatg atgacaaact cctcatcatc acaaatattc ctatgatgga
      181 agatgaaaac agttttgata cattgcctct gggtgttatt ttaactcccg aaaatattgt
      241 aacagtatct ttaaaagaaa acagaatcat atctttcttt aaccaggata caaccaaact
      301 ttttgacaca tctaacagaa cgagattttt atttcagata ctgtttcgtt ctacaaaatt
      361 ttacctgaga taccttgagc acatcaacag acatactgac aaaatagagg ttgaattaag
      421 acgtacaatg aaaaacaaag cattgtttca acttttagac gtgcaaaaat ctctggtata
      481 ctttactact nnnnnnnnnn nnngggtttt agaaaaactc agcaggttca aaaaatttgc
      541 agggttttca aactttatgg aatacaacga agaaatcgaa gacctgatgg aggacgttat
      601 cattgaaaac aaacaggctg ttgaaatggt agaaatgcac cgaaacatcc tcgagagcat
      661 gatggatgct tttgcatcaa ttatttccaa caatctgaac atagtaatga aatttttaac
      721 atctgtcaca attatactag ctattcctac aatggtttcc agcttctggg gcatgaacgt
      781 tgatgtacct atggctcatt ttcattatgc atttcttggt atattaatgt tctccttaat
      841 tcttgccgga atcatagcaa ctatattagc caaaaaggga ctgttctgat tttcattttt
      901 cggttttctt taagttaatg taacaatgtt aaaaattttc agggcatgat tagcaaattt
      961 ttttctgttt aatcttaata cttatagtca atgtgttatg tgaggtaaaa ctgtgaatat
     1021 caaaagtttg aattcaactt acaatttaaa agcaactaat ccgttaaata agaagaacaa
     1081 ccataatcaa aacccgagtt tttcaggttg tgttttgaca caggacactg cggggaacaa
     1141 tatttacaaa atttttgtac caaatgctcc acaaggtaca aaagttgaat acgtaaccat
     1201 gacaaaaaat aaagacggag tatacaaagc acattcaaaa cctcaaacaa gatatttgcc
     1261 aacaggctac caaccattga tattgacaga taaagatata aacctcgata aaaactcaac
     1321 acttggctat aaaataaccg taccgggaag tccactttac agagaaagct gtgctgcgga
     1381 tatggacagc ggatactata ttgcaaatgc tccatctgac cccaatttat cttcaccaaa
     1441 ggtcatagaa cacatttttg ttgacgcatt taatgttaaa gatgacaaag cattgcactc
     1501 taaacgtaac cactttaata ttatgggcgg aacaataaac tctgttaacg aaaagattcc
     1561 tgctcttgca gaagctggaa ttacagatgt tttaggcaat ccgcttattg gtcaggacaa
     1621 caaatccagc cagggatatt ggacaacaaa tccatatcaa attaccagaa acctcggcac
     1681 cattactgat tttaaaaatc ttatggttaa cttgttcaga catgatatga gatggattgc
     1741 ggatggtgca tttgttaacg aaggcattga gggtattcac attgaagata ttgcaaactt
     1801 cggcacacag agcccnnccc cgtttgtcaa ttattttgag acaaaagatc ttgattcgct
     1861 gactgctaaa tttggtatct actcaaaaaa tagcaatgtt aacaaacata ttcacattca
     1921 gcttgtcaac gcaccataca aaataaactt tgtaaaagac ggtgataaat acatagaaaa
     1981 agatgtaaaa cgagtttctt acgattcaac caagcccact tatattcaag tttttgatga
     2041 cagacttgcc tctgaagaac agatgaacgg cactgatatt tttgatattt atgccaacaa
     2101 aacaacaggc gatgattttg aaataacaaa ctacatgggc tctgtacaac caatacacag
     2161 aaaagtaaca cccaaagagg tcgaagataa ttacaaaaaa tataaagaag caagacatta
     2221 cgataaaaac atcgagttta aaaacagtct ttcaagatgg actaatttcg aatttgatat
     2281 ttcaaacaaa aatagcggaa tttctttgtg ggtaggaaac gcagatattt cgaaaaaacg
     2341 ttttgttttg ccggaacaaa gtgtacttga ccagttaaaa gacaaatcaa gaaagcctct
     2401 tattgaagct gctccatatc aagttcaaga tgatactgtc caggtaggca aattctggac
     2461 aaatgaagtt tcaagaacac ttgctgaaga agctgccaga gaaattggac aaaaagtaaa
     2521 tgaaggcagc tcatataaag atgcgattga tattttgatt aaagaacaaa agttgccaca
     2581 aaaagcaaaa attgtatacg aaaaagatga taacggaatc agcgcacttg ataacatttt
     2641 agaaaaagat ttctttgatg aaaatgaaag aaactataaa ctaaaaccat tcaaaatgcc
     2701 ggaatcaatc acagacggtt tgatggcatt tcctatggat gcaatagaat ttgcacctga
     2761 tctagcagga gcattgtcgt atccgcatat caaaaatctt gccgtaactg aagatacagt
     2821 tgggctttcc agatacgata tgtacaaaat gggcgatgta tattacaatc aaatgcctga
     2881 aagatacaga gcacagtata aaaaaatgga taatgtcatt gcaaatgaca tgagcgtaaa
     2941 aacaaaagat ataatcaaca aattaagtga aaaactcaat ataaaaatgc tggatgcaaa
     3001 aggagaatta acacaggaag gcaaagaaat ctatgcactt attgctgcgg atattgctaa
     3061 atttttagtt atttcagcac ttgcaccaaa aattcaattt aaagaaaacg acaagttttt
     3121 ggaatatgac cctgatgaat taagaaaaat aagtcaaaac tctttaaatc ttcaatatga
     3181 aatttcaccg gaagagctag ctgccgcttt gacaaacaaa atcaaaaaag gcgtaaattc
     3241 tatatctgcc gaaaaacagg ccgactttgt aaaccatctt gaaaaaagac ttcgcagcgt
     3301 caactcagat tctataaatg ttgcaagact tatcatggaa aaaacagaat caggtttgaa
     3361 ctggagaatt gatgcggcaa aagatgttgc ggctccagag ctggttgaag atgcaagatt
     3421 tgatgataat gcaaacaaac aggcagtaat gaaattctgg aacaaattca atgaaggaac
     3481 atttgagtac aatccaaaac gttattctat aggagaactc acaaattggc cttctagcat
     3541 tttttcagaa ttcaaacaaa aaacaggatt tacaacaatt tcagactacg aatacttcta
     3601 ttcctccata cccggattgt ttggcgttaa cagtgaaggt gttcacacag gttccttaag
     3661 tgaagttgtt caagacaagc tgtttagcaa aagcggtaat gtaggatata tggactcagg
     3721 caatgaagaa agtgtaaact atgctcacag gtttgtcggc aaccacgaca agccaagagt
     3781 attacatttg cttgctttag atatgttatt attcctaaat aataaaaatg aagcaatgtc
     3841 aaaagcactt gttgaaggat tccataatac agaaagatac caggctttgg atgataattt
     3901 taaagcctca atatacgaag tgatcaccaa ggtgcttgaa aaaggtaaat atctcaaaaa
     3961 cggaaaagaa gtcattgcag actctgaaaa ctttggagta agaccttttg actttaatat
     4021 tgatcttgtt atagaacaga caaaagaaaa aaatgcaggg ttcaaacatt atgcacaaaa
     4081 taatcctgca gaaataaaga aactaaaagc tgatgtattg cagactatac taannaaacc
     4141 agctctggaa aaataccgag caatatggtt tacaatgaac gcattaccag gtgcaccaac
     4201 caattatgcc ggtgatgaat ttggcatgac cggatgggaa acagcttgta aaaatgaaaa
     4261 acaagaaaac agaaacccca ttcgctggga cagactcgat gataatgatt acaaatttat
     4321 caaagaatac aaaagcaaaa ttgatgatat tagcaaaata agaaaaaaag aagcagcatc
     4381 agctctctcc aacggttcaa caatcaaatt ggaagaccag ccggtacaag gagaaagaag
     4441 cgccgttgct ttatacagat acaatgacaa aactgatgct gtttgtgttt tacacaatgc
     4501 cggatttggc ggtgatagaa accttgccgg atacgattta cacctcaatt caataaaact
     4561 cggaggtttg ccaaacggtt tgattgaagg aacaatttat cgtgatgcgt taaatccaga
     4621 aagcaagtat aaagttacaa atccgtacga aattaaaaaa atcgatgaca acggaaatat
     4681 acaagaagat ataaatcttg gcaatgccgg aataatatta ctgcgtgaaa aagattttaa
     4741 aggcaaagaa ctttctttta aaggaagaat cgaaaacgcc aatgtaaaac ttgcaaatac
     4801 aaagtttaat attgcagcac cttcttataa aagaatttaa aataattgcc tgaaaacatt
     4861 gtttaagtta atataatata gccgtgctcc acggggactt ggcggatctc tcgacccgaa
     4921 cgcttacgcg gggtgcagag cctgctgtga ggcttgtgga aaaaggagga atcgtatatt
     4981 tgtttatgat tgctcaagat ctttcggcaa aagcaatcga accgtgtcag atcaggaatg
     5041 aagcagcacn ntaagattca acttttgggt gaaagttttt tgagagggag ataaatatat
     5101 tgaggaattt gattttcatt tgacgatagg cagtggcacg gcttttattt tttatttttt
     5161 tgttttcttt ttgtttaata aatctttatt aagaatgtaa aaaaaatttt tagccagttg
     5221 tactaggaag catggtcaat tgtaaaactt attttacaaa aatcgtgttg ttttcaaact
     5281 tttatctttg tatgattatt tcactgggaa tagaaagagg tgatggcaaa ttccggggat
     5341 gataagaatc annnnnnnnn nnnnnnnnnn nnnnnnnntg aaaaagaatt aagtatgaat
     5401 taggttttgg ctactagccg ttgggaagag agaaattagg ggatgagaaa aagacaataa
     5461 agttctgtcg gatttttatg acagaacttt tttacatgtt aaaagttttt taaaaaatta
     5521 aaaaaaagta cttatttttt tttatgtctg tattaaaata aatatatcga acattaaaat
     5581 aaatcgggac gtagcaagga ctccgtttga aacgattgag tatcgttgca aatggaggta
     5641 ggctaagtca gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     5701 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnngtcg
     5761 caggttcaaa tcctgtcgtt ccgaccattt attaaaaatc ggagctcatt ttgggctccg
     5821 atttttttat ttaattcatt tggaatattt aaagcaatct ttttcatgat catcaacaat
     5881 cccgattgct tgaaggtacg aatacacaat cacagtaccc atatatttca ttcctcgttt
     5941 ttttaaat
//
LOCUS       DABS01000023            4805 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_30937, whole genome shotgun sequence.
ACCESSION   DABS01000023 DABS01000000
VERSION     DABS01000023.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4805)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4805)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4805
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            133..663
                     /locus_tag="CPT85_00865"
     CDS             133..663
                     /locus_tag="CPT85_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014969051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="DAB26996.1"
                     /translation="MNELFLETERLRLFKIDENNFAQLCLMHKDEDVMYAWEYIFSDE
                     EVKNWISKNIEFYEKYNLGYFLALDKNKNQVVGQIGLMPDIINGQRFLETGYILKKEF
                     WHNGYAYEGAKALIEYAFDVLQEKQVIAEIRPTNTASQKVAKKLGMKVIGDFVKIVHG
                     KEMLHLIYSIEKAKLS"
     gene            complement(650..1556)
                     /locus_tag="CPT85_00870"
                     /pseudo
     CDS             complement(650..1556)
                     /locus_tag="CPT85_00870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019245482.1"
                     /note="frameshifted; too many ambiguous residues; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dehydratase"
     assembly_gap    1107..1126
                     /estimated_length=20
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1344..1345
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1556..2857)
                     /locus_tag="CPT85_00875"
     CDS             complement(1556..2857)
                     /locus_tag="CPT85_00875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020771200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="DAB26999.1"
                     /translation="MRLCVVGTGYVGLVAGTCFAEMGNNVICVDKDTDKLKKLEKGII
                     PIFEPGLENLILENVKEKRLTFTADLDFAVKNSDVCFIAVGTPQKEDGSADLGAVFTV
                     AKSIADSMNEYKVIVNKSTVPVGTCEQIEQTIKENTSYDCDIVSNPEFLKQGAAVQDF
                     LKPDRVILGAKNERALKIMREIYDPFIRTGIPVIEMDIKSAEMTKYAANAFLALKISY
                     ANEIANICEAIGANSEMVRRGMCADNRIGSKFLFAGLGYGGSCFPKDVKALISVAKAN
                     GYSAEILNATDNINLRQRYIFINKIIKRYNGNLKDKKFALWGLAFKPETNDMREAPSI
                     NIVKELVMQGAKICAFDPKAMDTAKGILKDKITCEDSAYDAIVGADALILATEWNEFK
                     NPDFDRIKKELKEPVIFDGRNQYDPILLKEKGIEYHCIGAK"
     gene            2806..4605
                     /locus_tag="CPT85_00880"
     CDS             2806..4605
                     /locus_tag="CPT85_00880"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00581.18,HMM:PF07992.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26997.1"
                     /translation="MYLQLNRHNLYQLHKVSLIPPHFFIILTRNCCFYCRIFVCCIIK
                     INKEDFNMKILIIGGGACGASAAARLRRLDDNAEILILEKTHEISIANCGLPYYCSDI
                     IDSEEKMHVSSVQKFKNLLNVDIKMGANVTAINRIDKTVTVNDSEVLSYDKLVLTPGA
                     EPFVPDIQGINNPKIHTLRMLKDGNAIKEIVKNTNAKNAVVIGGGFIGVEMAENFKHL
                     KDVNTTLVELSSHILPPVDKETAAFAQNEMRKNGVNLVLSDGVKAFDNDYVVLNSGRK
                     LPYDIAVLAIGVKPQTSLARECGLVIGKSGGVKVNEHMQTSDPDIYAGGDSVEVTDFV
                     TNADVLIPLAGPANRQGRIIADNIAGYKSVYKKTIGSAVVKVFDLTIANAGNSEENLI
                     KRNIPYWKTFTYGFSHASYYPGATRTMYKLLFNAQGDILGVQAAGYEGVEKRVDVIAT
                     SMRNSLKVWDLIDSELCYAPPYSSAKDPVNILGMHADNILKGFVKPAYFEDIKDSVLV
                     DVRPAADYANETIDGALNIPTPELRSRCDELPKDKKVILFCNTGFQSYVASRILLQRG
                     FNNVYSLTAGIELYKELVKNQKALAAETAATVV"
     gene            complement(4606..>4805)
                     /locus_tag="CPT85_00885"
     CDS             complement(4606..>4805)
                     /locus_tag="CPT85_00885"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="DAB26998.1"
                     /translation="KLARKFLPQLQSKKLGIIAAHFNLNTDGMHRGLKDCTVTNLCYE
                     KFLDILNPDKPKQGSLLENLF"
BASE COUNT         1429 a          869 c          931 g         1554 t
ORIGIN      
        1 aacgtgacat ttagtcacct tttcgtcggc agagtatccc gcgctattta gtttgtacat
       61 tatattatta aacgctcaaa accaaaaatc aagtgtatag atttttaaaa caaatttctt
      121 tataataatc agatgaacga actgtttttg gaaactgaac gtctgcgcct ttttaagatt
      181 gacgaaaata attttgcaca attatgcctt atgcataagg atgaagatgt tatgtatgca
      241 tgggagtata ttttttctga tgaagaagta aaaaattgga taagtaaaaa cattgaattt
      301 tacgaaaaat ataaccttgg ctattttctt gcgttagaca aaaataaaaa tcaggttgtg
      361 ggccaaattg ggcttatgcc tgatataata aacggtcaaa ggtttttgga aaccggatat
      421 attctgaaaa aagaattttg gcataacggc tatgcttatg aaggtgcaaa agctttgatt
      481 gaatatgctt ttgatgtttt acaagaaaaa caggtaattg ccgaaataag accaacaaac
      541 actgcatcac aaaaagttgc aaaaaaatta ggtatgaaag taataggcga ttttgtaaaa
      601 atcgtacacg gaaaagaaat gctgcattta atttacagca tagaaaaagc taaactgtct
      661 taaaataatc gatggttttt ttgaggccgt ctataatatc cacttctggt tcccagccaa
      721 gctctttttg tgcaacggaa atatccggtt ttcttttgat ggggtcatcg cctggcagtg
      781 gtaaaaaaac gattttagat tgcgaaccgg ttagctctat tattttttga gccagatcaa
      841 gcacagtcct ttcagaaggg tttccaagat ttaccggacc gcaaaaaccg cttttgttgt
      901 tcatcatcct tatcattcct tcgacaagat cgtctacata acaaaaactt cttgtctggg
      961 tgccgtctcc gtaaattgtt atatcttcat tgctcaaagc ctgcataata cagttagaaa
     1021 caactctgcc gtctttagga tccatgttgg gtccatatgt gttgaatatt ctgataatcc
     1081 ttgtctcaat gccgtattgc ctgtggnnnn nnnnnnnnnn nnnnnncata acaacttctt
     1141 atgccgatgg ggtttacatt gccccagtat gtttcatttt gcgggtgtac aagagggttt
     1201 ccgtatactt cggatgtaga ggcctgcaag atggttgcat tatgtttttt tgcaagctcg
     1261 agcatattta atattccaag cacggaagtc ttcattgttt tgacagcatc atactgataa
     1321 tgcggcgggc ttgccggaca agcnntgtag atctggtcgc attctatatc aacagggttg
     1381 ataatgtcgt gctcttttaa tgtaaaattg gggtgctcaa gcaaatcagc aatatgtttt
     1441 tttaaaccgg taaaaaaatt atcaagacaa attactttgt ttccttcttt taaaagcctt
     1501 ctgcaaagat gattgcctat aaatcctgct ccgccggtta ccaaaattct tttcattact
     1561 ttgcccctat acagtgatat tctatgcctt tttcttttaa caaaatcggg tcatactgat
     1621 ttctgccgtc aaaaataaca ggttctttca gttctttttt tattctgtca aaatcaggat
     1681 ttttaaattc attccactct gttgccagaa taagagcatc tgcaccaaca atggcatcat
     1741 aagcagagtc ttcacacgtg attttatctt ttaaaattcc ctttgccgta tccatagctt
     1801 tggggtcaaa tgcacaaatc tttgcacctt gcataacaag ctctttcact atgttaatag
     1861 agggcgcttc tctcatatcg tttgtttcgg gtttgaaagc aagaccccat agtgcaaatt
     1921 ttttgtcttt caaattaccg ttgtaccttt ttataatttt gttaataaaa atatatctct
     1981 gacgcaagtt tatgttgtct gtggcattca aaatttctgc actgtatccg tttgcttttg
     2041 ctactgatat caaagccttt acatcttttg ggaagcaaga gcctccgtat ccgagccctg
     2101 caaacaaaaa cttggagccg atacggttgt ctgcacacat accccttctc accatttcgg
     2161 aatttgctcc gatggcttca caaatgtttg caatttcatt tgcataagat atttttaatg
     2221 caagaaaagc gtttgcagca tattttgtca tttcagcaga ttttatgtcc atttcaataa
     2281 caggtattcc tgttctaata aaagggtcat agatttctcg cattatttta agagcacgtt
     2341 cattctttgc tccgagaatg actctatccg gttttaaaaa gtcctgtaca gctgcgccct
     2401 gttttaaaaa ttcagggttt gacacaatat cgcaatcgta ggatgtattt tctttgatag
     2461 tttgttctat ttgttcacaa gttccgaccg gtactgtgga tttgtttacg attactttgt
     2521 attcgttcat agaatccgcg atgctttttg ctacagtaaa cactgcgccc aaatctgcag
     2581 agccgtcttc tttttgtggt gtgcctactg caataaaaca tacatcgctg ttttttacag
     2641 caaaatctaa atcagctgta aaagtgagtc ttttttcttt tacgttttcc aaaataagat
     2701 tttcaagacc cggttcaaat atcggaataa tgcctttttc aagtttctta agtttgtctg
     2761 tgtctttgtc aacgcatatt acattgtttc ccatttctgc aaaacatgta cctgcaacta
     2821 aaccgacata acctgtacca actacacaaa gtctcattaa ttcctccaca tttttttata
     2881 attttaacac gaaattgttg tttttattgc cggatttttg tatgctgtat tatcaagata
     2941 aataaagagg attttaatat gaagatttta attataggtg gaggtgcttg cggtgcaagc
     3001 gctgcggcaa gactaagaag gctggatgat aatgcggaga ttttgattct tgaaaaaact
     3061 catgaaattt ctattgcaaa ttgcggtctg ccttattatt gctctgacat aatagacagt
     3121 gaagaaaaaa tgcatgtttc aagcgtgcaa aaatttaaaa accttttaaa tgttgatata
     3181 aaaatgggtg ccaacgtaac tgctatcaat cgtattgata aaacagttac agttaatgat
     3241 tcagaggttt taagttatga caagctggtg cttacgccgg gcgctgaacc gtttgtgccg
     3301 gatatacaag ggataaataa ccctaaaata catacactta gaatgctaaa agacggcaat
     3361 gccataaaag agattgtaaa aaatacaaat gcaaaaaatg cagttgtgat tggcggcggt
     3421 tttattgggg ttgagatggc tgaaaacttt aaacatctca aagacgtaaa cactacactg
     3481 gttgagcttt cctctcatat ccttccacct gttgataaag agacagcagc atttgctcaa
     3541 aatgaaatga gaaaaaacgg agttaatctt gttctgtctg acggagtaaa agcttttgat
     3601 aatgattatg tagtattgaa ttccggcaga aagttacctt atgatatcgc agtgcttgca
     3661 attggtgtaa aaccacaaac ctcacttgcc cgcgaatgcg gacttgttat cggtaaatcg
     3721 ggaggtgtga aggttaacga acacatgcaa acatcagacc ctgatatcta tgcaggcggt
     3781 gacagcgttg aggtaaccga ttttgttact aatgcggatg tgcttattcc tttggccggt
     3841 ccggcaaaca gacaggggcg tattattgcg gacaatattg caggatataa atctgtgtac
     3901 aaaaaaacaa taggctctgc tgttgtaaaa gtttttgacc ttactattgc aaatgcaggt
     3961 aatagcgagg aaaatctcat taaacgcaat atcccttact ggaaaacttt tacatacgga
     4021 ttttcacatg caagttacta tccgggtgca acaaggacta tgtataaatt gttgtttaat
     4081 gcacagggcg atatcctggg agtgcaagct gccggatacg aaggggtgga aaaacgtgtg
     4141 gatgtaatag ctacatcaat gaggaattct ttgaaggtat gggatttgat agattccgag
     4201 ttatgctatg ctcctcctta ttcttcagca aaggaccctg taaatatact gggtatgcat
     4261 gctgataata ttttaaaggg ttttgtaaaa ccggcctatt ttgaagatat caaggactct
     4321 gtgctcgtgg atgtgcgccc tgcagcagat tatgcaaacg aaacaataga tggtgctttg
     4381 aatataccta caccggagct tcggtcaaga tgtgacgagc ttccgaaaga taaaaaagtt
     4441 attctgtttt gcaacaccgg ttttcaaagc tatgttgctt ccagaattct tttgcagcgt
     4501 ggatttaaca atgtatacag cttgacagca ggcatagaac tctacaaaga gcttgtgaaa
     4561 aatcaaaagg cgctggcggc cgaaactgca gcaactgttg tttaattaaa aaaggttttc
     4621 aagcagtgag ccctgtttgg gcttatcggg atttaatata tcaagaaatt tttcataaca
     4681 gaggtttgtt actgtacagt ctttcagacc tctgtgcatt ccgtctgtgt ttaaattgaa
     4741 atgcgctgca atgataccaa gctttttgct ttgaagctgg ggtaaaaatt ttctagccag
     4801 tttta
//
LOCUS       DABS01000024            6673 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_2371, whole genome shotgun sequence.
ACCESSION   DABS01000024 DABS01000000
VERSION     DABS01000024.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6673)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6673)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6673
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..414
                     /locus_tag="CPT85_00890"
     CDS             <1..414
                     /locus_tag="CPT85_00890"
                     /inference="COORDINATES: protein motif:HMM:PF01323.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26985.1"
                     /translation="SNIKVVHHNLPLDMECNPKLKQQMHEGSCLMAKYAIAAGRQGKY
                     WDMNNMLFDKEFSGEDSILQNAAQIKGLNIEKLKKDAHGPEVAKELQKEIEEATQFGI
                     DGTPAFRINQETRIGIMPYEEFKAKLINAGAIERK"
     gene            421..954
                     /locus_tag="CPT85_00895"
     CDS             421..954
                     /locus_tag="CPT85_00895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014487290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26986.1"
                     /translation="MEKILLHACCAVCMAYPIEVLKENYEPVVFFCNPNIYPEEEYLR
                     RRDELIKYCEEKGFEYIIDNYEPEKWYAFVQGYEREPEKGLRCNKCFEYRLNKTAQKA
                     KELGINFFTTTLSVSPHKVSKNIFEQGKNAAKSYGVEFVEKDFKKQNGFLKTMEIAKK
                     NNFYRQQYCGCEFSIRK"
     gene            1003..1995
                     /locus_tag="CPT85_00900"
     CDS             1003..1995
                     /locus_tag="CPT85_00900"
                     /inference="COORDINATES: protein motif:HMM:PF00480.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="DAB26987.1"
                     /translation="MPNYAIGIDLGGTKILTGLVNKGNGEVLYSIKQKTGKEKDAETI
                     VEKLKLSIKELLETSHFDIAQIDSIGIGAPGQVDRDKGILVSAPNLNCENLNLKAIME
                     REFYIPTFIGNDVEIATLGEMKFGAGKDYNDFVCIFVGTGIGSGIACDGKVRHGATGT
                     AGEIGHIIVDAGGRPCGCGANGCLEAYASRTAIEARIMGALKKGRPSVITEFMRDDKA
                     ISSKMIRKALEHKDELITQILFEASDYLSNGLATIINFYNPELIVMGGGLIDAVDEFY
                     ERTITKAKAKALPIPASKIQFKKAKLGDFSGVVGACFLQDSQKTRTPEKSGALN"
     gene            complement(2006..2203)
                     /locus_tag="CPT85_00905"
     CDS             complement(2006..2203)
                     /locus_tag="CPT85_00905"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26988.1"
                     /translation="MGXKLVAGGGIATATGTTTSAVASATQGDTQAAVKTATDGLNSL
                     SSGFNTYNTEMDKIKNSQKTA"
     gene            complement(2188..3396)
                     /locus_tag="CPT85_00910"
     CDS             complement(2188..3396)
                     /locus_tag="CPT85_00910"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26989.1"
                     /translation="MGGNPFSITSTDLLKKKQGVQGQDGVEQKQSTQETRKAKEKDNL
                     QQTNVLQASNGGSMATTDGVFENYDGFQRTTVAPIAQNKEEEEASSLLDATGAATNKA
                     KAKKSDCEDYSKAASDDEKSIQTSVKKEKTESKKMQQKVNQNTQQQDALKSENDTLKD
                     DVDTLNDEIAELMAEDGQDYTPQEAPEAQPVAMPQAGGNAESEAAVMVSADNGDGANS
                     GMSTNITAGSDAAGGGNNIFAMNSLPTPGQQSAAPTSTTAVAAQNSGQTQNAQAGKGQ
                     QAQQSAGKSASNAAGGSLNAFGSSLVSAKGKNADKINEKLAQLGEKNSTISSNNSSIN
                     AFTSSSLKTANSYKSFLTSSISQTNAKKSSNASNTNAAKAAQTVGQTTSLTGGVATAV
                     GGAMLVWGXN"
     assembly_gap    2196..2197
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3499..5286)
                     /locus_tag="CPT85_00915"
     CDS             complement(3499..5286)
                     /locus_tag="CPT85_00915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012415058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="DAB26990.1"
                     /translation="MKLKDTSAQNSFDYAYLTKRMYKYIKPYMFRIVLGFLIALPVGA
                     LDGVIAYALKPYMDEVLIKKNMLLACIIPFGIVAFAALQGVLRYLNDYLTNWTGQKVT
                     NDVKLGLFKKLVQMDAKFYDDNSSGIILTRYLSDPETASKGILDNIKALMSSGIGAFA
                     LIGVMLYNSWELALVGVVVLCVAFLPAALIRKRIKSASNKTMKIGGNIMTDFNETTQG
                     NKIVSAYNLEEYQYKKFHQEIKDGFDVNMSLVKRVAWMSPIMYTIASIGIAFVMAFGT
                     YLVLSGRMTSGSLLSFVTSLLLLYKPVKTLGNTLTNIQTIFVSLCRTLELFDIEPEIK
                     DNENSVEISQVKEGVSLENVCFEYVKDTPVLKNINLSARVGETVAIVGNSGGGKTTIA
                     NLIPRFYDVTSGAIKIDNTDIRNIKISSLRQHISVVFQDNFLFSGTIKENLLMGNFKA
                     TDEDIERVVKAAHLDEFLSEMPDGIDTEIGERGTTLSGGQRQRVAIARAMLKDSPIVI
                     LDEATSALDNKSEAIVQKALDNLMQNKTVFVIAHRLSTIKNANKIAVINEGELVELGS
                     HDELLCRDNGFYKRLYEMQFASKDAALAE"
     gene            5373..>6673
                     /locus_tag="CPT85_00920"
     CDS             5373..>6673
                     /locus_tag="CPT85_00920"
                     /inference="COORDINATES: protein motif:HMM:PF00488.19"
                     /note="MutS2; MutS-II; involved in blocking homologous and
                     homeologous recombination; has ATPase activity stimulated
                     by recombination intermediates; inhibits DNA strand
                     exchange; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="DAB26991.1"
                     /translation="MNKTLKTIEFDKVLEILSGFAVSKLGKKRCLEVLPLVDSDEIKL
                     AQTLTTQAQNAYRLSASSIPVSGLEDITDALSLLKNKITLCVEDVKNIYGILCDARKF
                     SSFLHKYAENEDKLFEFTHKLFVFADLEQKIQDIFDSGFNVKESASIELKSLYQAQRD
                     TNENLKHTISDLMKNSEFTSYLQDNVYTLRDNRVVFQVKAESKNKVQGIVHDISQSGQ
                     TYFIEPKQVVGLNNKLRELEISIEAEIQKIIKELSSEIAQYYEEIKSSFEALIELDFI
                     FAKAKYSTAIDACEPEILEKPVIELKSMKNPVLLSILDKVVENDFSIGEHYKSIIITG
                     SNAGGKTVVLKTVGLSIAMSAAGLHIPCFSARVYPFKKLFAEIGDDQNIIQSLSTFSS
                     HVKNIKEILDNADSETFILIDEIAAGTDPKEGASLAKAIME"
BASE COUNT         2036 a         1179 c         1273 g         2183 t
ORIGIN      
        1 tctaatataa aagttgtgca tcacaacctg cctttggata tggagtgcaa tccaaagctc
       61 aaacaacaaa tgcacgaagg ttcttgcctt atggctaaat atgcaatagc tgcaggtcgt
      121 cagggtaaat actgggatat gaataatatg ctttttgata aagaatttag tggagaagat
      181 tccatattgc aaaatgcagc tcaaattaag gggcttaata tcgaaaaact caaaaaagat
      241 gcacacggcc ctgaagttgc aaaagagctg caaaaagaaa ttgaagaagc aactcagttt
      301 ggtattgacg gcactcctgc ttttaggata aatcaggaaa ccagaattgg tataatgcct
      361 tatgaagaat ttaaagcaaa attgataaat gcgggtgcaa tagaaagaaa ataaaaataa
      421 atggaaaaaa ttcttttaca tgcctgctgt gcagtatgta tggcttatcc catagaagtt
      481 ttaaaagaaa actacgaacc cgtagttttc ttttgcaatc ctaatattta tcccgaagag
      541 gaatatttgc gaagacggga tgaacttata aaatactgcg aagaaaaggg ttttgaatat
      601 ataattgata actatgaacc ggaaaagtgg tatgcttttg tacagggata tgaaagagaa
      661 cccgaaaaag gtctgcgctg caataagtgt tttgagtata gattaaataa aacagcacaa
      721 aaagcaaaag aacttggtat caattttttt acaacaacat tgagtgttag cccgcataaa
      781 gtttcaaaaa atatttttga acaaggcaaa aatgctgcaa aatcgtatgg tgttgaattt
      841 gtagaaaaag attttaaaaa acaaaacggt tttttaaaaa caatggaaat tgctaaaaag
      901 aataacttct atcgtcaaca atactgcgga tgcgagttta gcataagaaa ataatatgct
      961 ataattttaa atacagtgag acaaacggag ccaatttaat atatgccaaa ttatgcgata
     1021 ggaattgact taggcggaac taagatttta acaggacttg ttaataaagg taacggtgaa
     1081 gtactttatt caataaaaca aaaaacaggc aaggaaaaag atgcggaaac tattgttgaa
     1141 aagttaaaac tttccataaa agagctttta gaaacttctc attttgatat tgcgcagata
     1201 gattctattg gaataggtgc acccggtcag gtggacagag ataagggaat actggtttct
     1261 gctcctaacc tgaattgcga aaatttaaac ctcaaagcca taatggaacg agaattttac
     1321 ataccgactt ttattggcaa tgacgtagaa atagcaactc ttggagaaat gaaatttggc
     1381 gccggtaaag attataatga ttttgtctgt atttttgttg gtaccggtat aggctccggt
     1441 atcgcgtgcg atggaaaagt gcgtcacggc gctacaggca cagcaggtga aattggccat
     1501 attattgttg atgccggagg ccgtccatgt ggatgcggtg ccaacggctg ccttgaggca
     1561 tatgcttcac gtactgctat tgaggccaga attatgggtg cgctaaaaaa aggacgtccc
     1621 tctgtgataa cggaatttat gcgtgatgac aaagctatta gctccaaaat gattagaaaa
     1681 gcacttgaac ataaggatga gcttattacg cagattctgt ttgaggcatc tgattacttg
     1741 tctaacggac ttgcaacaat tataaatttt tataatcccg aacttatagt tatgggtggt
     1801 ggtctgatag atgccgtgga cgaattttat gaacgtacaa taacaaaagc aaaggctaaa
     1861 gctttgccca tcccagcatc aaaaattcag tttaagaaag ccaaactcgg tgatttctcc
     1921 ggtgttgtag gagcttgttt tttacaggat tctcaaaaaa caagaacacc tgaaaaatca
     1981 ggtgctctta attaattatt ttatattaag ctgttttttg actgtttttt attttatcca
     2041 tttctgtatt gtatgtatta aatcctgaag acaatgaatt taaaccgtct gtagctgttt
     2101 tcacagcggc ttgagtatca ccctgtgttg ctgaagctac ggctgatgtg gttgtgcctg
     2161 tagctgttgc aattccaccg cctgctacta attttnnccc catacgagca ttgcaccgcc
     2221 aacagctgtt gctactccgc ctgttaagct ggttgtttgg ccaactgtct gagctgcttt
     2281 tgctgcattt gtgtttgaag cattgcttga tttcttagca tttgtttgtg agatagaact
     2341 tgttaagaat gatttatatg aattagctgt tttcaagctc gaggaagtaa atgcgtttat
     2401 acttgaatta ttagaactta ttgttgaatt cttttcacct aattgagcaa gtttttcatt
     2461 gattttgtct gcattttttc cttttgccga aaccagagaa gatccaaaag cattgagtga
     2521 accgcctgct gcatttgatg cggatttgcc tgcggattgt tgagcttgtt gaccttttcc
     2581 ggcctgagca ttttgtgtct gtcctgaatt ttgtgctgct actgctgttg ttgatgttgg
     2641 tgctgcactt tgttggcccg gagtcggtaa tgaattcatt gcaaaaatat tattgcctcc
     2701 gcctgctgcg tcgctgccgg ctgtaatatt tgttgacatg cctgaatttg cgccgtctcc
     2761 gttatcagct gataccataa cagctgcttc agattctgca tttccaccgg cttgaggcat
     2821 tgccaccggt tgagcttccg gagcttcttg cggagtatag tcttggccgt cttctgccat
     2881 aagctctgcg atttcatcat ttaaagtatc aacgtcatct tttagggtat cgttttctga
     2941 tttaagagca tcttgttgct gtgtattctg gttgactttt tgctgcattt ttttagattc
     3001 tgttttttct ttttttacag acgtttgtat tgatttttca tcgtctgagg cagcttttga
     3061 atagtcttcg cagtcagatt ttttagcttt tgctttattt gttgctgctc ctgttgcatc
     3121 taaaaggctt gatgcttctt cttcttcttt gttctgtgca attggtgcaa ctgttgttct
     3181 ttgaaatccg tcatagtttt cgaacacgcc atctgttgtg gccatagaac cgccatttga
     3241 tgcttgcaag acattggttt gctgcagatt gtctttttct ttggctttac gggtttcctg
     3301 ggtgctttgc ttttgctcaa caccatcttg gccttgtaca ccttgttttt tctttaataa
     3361 atccgttgaa gtaatactga atggattacc gcccataacg cacacccttg tttctttttt
     3421 atttacacat ctatataaat aaaaacaaat gatatacgca atattcaaag aatatataaa
     3481 atgttacaat tcttaatgtt actcagcaag tgctgcatct tttgatgcaa actgcatttc
     3541 gtacaagcgt ttgtaaaatc cgttatctct gcataagagt tcatcatgtg aacccagctc
     3601 tacaagctct ccttcattaa taactgcgat tttattagca tttttaattg ttgaaagcct
     3661 atgcgcaatg acaaaaaccg ttttgttttg cataagatta tccagagctt tttgtacaat
     3721 tgcttcagat ttgttgtcca gagcagatgt ggcttcgtca aggattacta tcggagagtc
     3781 tttgagcatt gctcttgcta ttgccacacg ttgtctctgg ccgcctgaga gcgttgtgcc
     3841 tctttctcct atttccgtat caattccgtc aggcatttcg cttaaaaatt catcaagatg
     3901 tgctgctttt acaacacgtt ctatgtcttc atcagttgct ttgaaattgc ccataagaag
     3961 attttcttta attgtgccgg aaaacaggaa gttatcctgg aaaactactg atatatgctg
     4021 tctaagcgag ctgattttta tatttcttat atctgtatta tctattttta ttgcacctga
     4081 tgttacatca taaaagcggg gaataaggtt tgcaatggtg gttttcccgc ctccggaatt
     4141 ccctacaatc gcaactgttt ctccaacacg tgcagataag tttatatttt ttaatacagg
     4201 tgtatcctta acatattcaa aacatacgtt ctctaaagaa acaccttctt taacctgtga
     4261 aatttcaacg gaattttcat tatctttgat ttccggttct atatcaaaga gctccagcgt
     4321 tctgcaaagt gaaacgaaaa ttgtttgaat atttgtcaga gtattgccca gtgtttttac
     4381 aggtttgtat aacaataaca atgacgtaac aaacgaaagc aagctgccgc ttgtcattct
     4441 gccggaaagt acaagatatg taccaaacgc cattacaaaa gctatcccta tggatgcgat
     4501 tgtatacatg attggcgaca tccacgcaac tctttttaca agggacatgt taacatcaaa
     4561 cccgtctttg atttcttgat gaaatttttt atattgatat tcttcaagat tataggctga
     4621 aacaattttg ttgccctgtg ttgtttcgtt aaaatcggtc attatattgc ctccgatttt
     4681 cattgttttg ttagaggcgg acttgattct ttttctaatc aaagctgcag gcaaaaacgc
     4741 aacgcaaagt accacaacac ctactaatgc caattcccaa gagttgtata acataacacc
     4801 aatcaaagca aatgcgccta taccggaact cataagagcc ttgatattgt ccaatattcc
     4861 ttttgatgca gtttccgggt cagaaagata ccttgtcaaa ataatacccg atgagttgtc
     4921 atcataaaat tttgcatcca tttgaacaag ctttttaaat aatccaagtt ttacatcgtt
     4981 tgtaactttt tggcccgtcc agtttgtgag gtaatcgtta agatatctta aaacgccctg
     5041 taaagcggca aatgctacaa ttccaaaagg aatgatgcag gcaagaagca tatttttttt
     5101 gattaaaact tcgtccatat aaggtttaag tgcataagca atgacaccat ccagtgcgcc
     5161 tacaggcaat gctatcaaaa atcccaaaac aattctaaac atgtatggct tgatgtattt
     5221 atacattctt ttggtcaaat atgcataatc aaaagaattc tgcgccgagg tgtcttttaa
     5281 cttcatatag ttctatcctt ataaattccg atactctctt ttaaaataat atcgtaaaca
     5341 acaaaagtaa tccaccatga tataattgtg ctgtgaataa aacgttaaaa acaattgaat
     5401 ttgataaggt attggaaatt ttaagcgggt ttgctgttag caaactcgga aaaaaacggt
     5461 gtcttgaggt tttgcctctt gttgattcgg atgaaataaa attggcacag acccttacta
     5521 cacaagctca aaatgcgtac aggcttagtg cttcttcaat acccgtgtca gggctcgagg
     5581 atatcacaga tgctttgagt cttttaaaaa acaaaattac cttgtgtgtt gaagatgtaa
     5641 aaaatattta cggcatttta tgcgatgctc gcaagttttc atcatttttg cataaatatg
     5701 ctgaaaatga ggacaaactt tttgagttta ctcataaact gtttgttttt gcagatttag
     5761 aacaaaaaat acaggatata tttgattcgg gttttaacgt caaggagtct gcttcaattg
     5821 agttaaaatc gctttatcag gcgcaaagag atacaaatga aaatttgaaa catacaattt
     5881 cagatttgat gaaaaattct gaatttacct cttatcttca agacaatgtt tataccttac
     5941 gtgacaaccg tgttgttttt caggttaagg ctgaatctaa aaacaaagtt caaggtattg
     6001 ttcacgacat atctcaatca ggccaaactt attttattga accaaaacag gttgtcgggc
     6061 taaataataa attacgtgaa ttggaaattt ctatcgaagc tgaaatccaa aaaataataa
     6121 aagagttgtc atcagaaata gcgcaatatt acgaagagat aaaatcttca tttgaggcat
     6181 taatagaatt agactttatt tttgcaaaag caaaatactc cactgcaatt gatgcctgtg
     6241 agcctgaaat attagaaaaa cctgttattg agctaaaatc tatgaaaaat ccggttttgt
     6301 tgtcaatttt agataaagtt gtggaaaatg atttttctat aggagaacac tataaatcaa
     6361 ttatcattac aggttcaaat gcaggtggaa aaactgttgt gttaaaaaca gtaggccttt
     6421 ccattgctat gagtgcggca ggtttgcata ttccttgttt cagtgccagg gtttatcctt
     6481 ttaaaaaact ttttgcagaa atcggggatg accaaaatat tattcaaagt ttatcaactt
     6541 tttcttcgca tgttaaaaat ataaaagaaa ttctcgataa tgcggactct gaaacattta
     6601 ttttgataga tgaaatagct gccggtactg accccaagga gggcgccagc cttgccaaag
     6661 ctataatgga aaa
//
LOCUS       DABS01000025            4355 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_29357, whole genome shotgun sequence.
ACCESSION   DABS01000025 DABS01000000
VERSION     DABS01000025.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4355)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4355)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4355
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            229..1140
                     /locus_tag="CPT85_00925"
     CDS             229..1140
                     /locus_tag="CPT85_00925"
                     /inference="COORDINATES: protein motif:HMM:PF00669.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin FliC"
                     /protein_id="DAB26954.1"
                     /translation="MAIIVNTNMSALKTQKNLNNASNSLQTALERMSTGLKINKAADD
                     AAGLYVATNLNTQISGSKVAKNNISTGNNVLSTLEGDLDVILDNLNRIRDLSVQAANS
                     IYDESAMGAMKDEIDQRLQEIDRISLASNFNGLQLLAGEGQLAENGLRLQVGANADSA
                     ANAISLDETFFAKTDSTTLGTSYTGQLPNGTTLDASDGLSGNLDAAFANASSAAQYID
                     IIDAAIDDISSKKSTIGATMNRLDAALTSLTTVIENNTAAKSTIMDADIAEESAEYTK
                     QQILQQTSSALLVQANQLPSLALNLIQ"
     gene            complement(1241..2161)
                     /locus_tag="CPT85_00930"
     CDS             complement(1241..2161)
                     /locus_tag="CPT85_00930"
                     /inference="COORDINATES: protein motif:HMM:PF00480.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26955.1"
                     /translation="MKKEQKALGIDIGGTKILYGIVDQNGNIVSDIQKKPTPKTAGEI
                     YETLKNIIALNYDKIDAVGLSSAGAVNIENTRVLSSTPNLPSGYKDIDFSSLSDKKVF
                     VENDANCAVVAEYKIGAAQGYNTVLMATIGTGIGGGVVSEGKLFRGSTGNALEIGHMR
                     IFADNRQKCTCGRFDCWESYASGTGLKNCAKEGVKTYKEFSTSILKDKNPDDITTYDI
                     TDGVKNDDAFCKRVFEQWQCYLFVGLVSLTNVFNPDCIVISGGMCNFIDIKKLEENIN
                     KESVVTDVKVKVAMTENNAGMIGAGVLALQ"
     gene            complement(2165..2869)
                     /locus_tag="CPT85_00935"
     CDS             complement(2165..2869)
                     /locus_tag="CPT85_00935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019908029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="DAB26956.1"
                     /translation="MDNIVAQIKNKVIVSVQAMPSEPLYKEDCMTAMMQSVVKGGAAA
                     LRVAGTRDVINAKKLFKIPVIGITKPEVIPPNWREIVYITPTIKDAKDLILAGADIVA
                     FDGTSRPRGENNLKQIIKFIKINKKIAMADIATLQEGINARLLGADIVSTTLSGYTVE
                     SPETSEEPDFELLKGLVQSVDCPVILEGRIWTPQQVDKAFELGAHAVVIGSAITRPQL
                     ITKRFVNRKDKIAKNG"
     gene            complement(3216..4064)
                     /gene="speB"
                     /locus_tag="CPT85_00940"
     CDS             complement(3216..4064)
                     /gene="speB"
                     /locus_tag="CPT85_00940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006307013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="DAB26957.1"
                     /translation="MPASETLGPFLSRNWIGSVDSYDNADIVMIGLPFDGTCSYRPGS
                     RFAPERLRIASWGLEDYSPVYDKHLDDVNFYDAGELEFPLGNTEKTLDVIEKNARIVF
                     QDGKKYLGIGGEHLVTYPALKACYQKYPDLAVIHFDAHTDLREDYLGEKLSHASVMRL
                     IGETIGFENIKQIGIRSGLQEEFDLMKKYNTLVKNSADLEQIKHKKIFLTIDVDVLDP
                     AFMPGTGTPEPDGLMYRELAEWIKYLKDFDIVGADIVELAPDYDKSEVSTAVVTKIVR
                     DVLMIL"
     gene            complement(4089..4340)
                     /locus_tag="CPT85_00945"
     CDS             complement(4089..4340)
                     /locus_tag="CPT85_00945"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26958.1"
                     /translation="MQLIGNYMQFRSYFQDIYNYPYLINLDKISIVPYADNKRILIAD
                     VTVILYSAKNEQQKAAAAAASQHDQGDEKIEGTGVNVGS"
BASE COUNT         1331 a          872 c          760 g         1392 t
ORIGIN      
        1 gctttttatt ttgctttaat ttcatacttt agttttaaaa acttctaact ttttaagaat
       61 taagtattca aattcaaacc tgtattatat gtatgtgaag aacaggatag atagaaaatt
      121 cacagtctaa ataggcgatt agctattaga taggtagatt agttaaagag aattacagtc
      181 tattaaaatt tacaggatgt aaatagggta tgccgaaagg agaatcgtat ggcaattatc
      241 gttaacacaa acatgtctgc gttgaaaacg caaaaaaact tgaacaatgc ttcaaactct
      301 ttgcaaacag cattggaaag aatgtcaaca ggtttgaaaa tcaacaaagc agcagacgac
      361 gcagcaggtc tttatgttgc aacaaacctg aacactcaaa tcagtggttc aaaagtagcc
      421 aaaaataaca tttcaacagg taacaacgta ctttctacat tagaaggtga cttagacgtt
      481 atcctggaca acctcaaccg tatcagagac ttgtcagtac aagccgcaaa cagtatctat
      541 gacgaaagcg ctatgggtgc gatgaaagac gaaatcgatc aacgtttaca agaaatcgac
      601 agaatttcgc ttgcatctaa ctttaacggc ttgcagctgt tagccggtga aggtcaactt
      661 gcagaaaatg gtttgagact tcaagtaggt gcaaatgctg attctgcagc aaacgcaatc
      721 tctcttgatg aaactttctt tgcaaaaact gactcaacta cacttggtac atcttataca
      781 ggtcagcttc ctaatggtac aacattggat gctagcgatg gcctttctgg aaaccttgat
      841 gcagcatttg caaatgcaag tagtgcagct cagtacattg atattattga cgcagcaatc
      901 gatgacattt cttctaaaaa gtctacaatc ggtgcgacaa tgaacagact tgacgcagct
      961 ttgacttctt taacaacagt tattgaaaac aacacagctg caaaatcaac aattatggat
     1021 gctgacattg cggaagaatc agctgaatat acaaaacagc aaattcttca acaaacatca
     1081 tcagctttgt tggttcaagc aaaccaatta ccttcattag ctttgaactt gattcaatag
     1141 ttaatttaac attacaaaca atagataaat ttacaataat aggtgatggc aacttgcccg
     1201 ggacaattag ctccgggctt tttctttttt actaccgttt ttattgaagg gcaagtactc
     1261 ccgcgcctat cattccggca ttattttcgg tcatagccac tttaactttc acatctgtta
     1321 caacagattc tttattgata ttttcttcaa gtttttttat atcaataaaa ttgcacatac
     1381 cgccagatat tactatacaa tcggggttga aaacatttgt caatgaaaca agacctacaa
     1441 aaaggtagca ttgccactgt tcaaaaaccc ttttgcaaaa agcatcatcg tttttaacac
     1501 cgtctgtaat atcatatgtt gtgatatcgt cgggattttt atcttttaaa atgcttgttg
     1561 aaaactcctt gtatgttttg acaccttctt ttgcacaatt tttcagccct gtaccggacg
     1621 cataagattc ccagcagtcg aatctgccac aggtgcattt ttgtctgtta tctgcaaaaa
     1681 tacgcatatg gcctatttcc agagcattac cggttgaacc tctaaaaagc tttccttcag
     1741 acacaactcc gccgccaatg cctgttccga ttgtggccat aagcactgta ttgtaacctt
     1801 gagctgctcc tattttgtat tctgccacca ctgcacagtt tgcatcattt tcgacaaaaa
     1861 cttttttatc tgaaagtgaa gaaaaatcaa tgtccttgta gcctgaaggc aaattgggcg
     1921 ttgagcttaa cacgcgtgtg ttttcaatat ttactgctcc tgcggaagac aaaccaactg
     1981 cgtcaatttt gtcataattt agggcaataa tattctttaa agtttcgtag atttcacccg
     2041 ctgttttggg cgttggtttt ttttgtatat cagagactat attgccgttt tggtcaacaa
     2101 taccgtacag aattttagtc ccgcctatat caatgccgag tgctttttgt tcttttttca
     2161 tatactatcc gttttttgcg attttatctt ttctgttaac aaatcttttt gttatgagct
     2221 ggggccttgt aattgcggaa cctataacta cagcgtgggc accgagctca aaagccttgt
     2281 ctacctgttg aggagtccat attctgcctt caagtatgac agggcaatca actgattgta
     2341 cgagcccttt taacaattca aaatcaggtt cttcagaagt ttccggcgat tctaccgtat
     2401 acccggacaa cgtagtagaa acaatgtcag ctcccagcag ccttgcattt ataccttctt
     2461 gcagagtagc aatatcagcc attgcaattt ttttgtttat ttttataaat ttgattatct
     2521 gtttcaggtt attttcgcct ctgggtctgg atgttccatc aaatgccaca atatcagcac
     2581 ctgccagtat caaatctttg gcatctttta ttgtcggggt aatgtaaact atttccctcc
     2641 aatttggcgg tatgacttcc ggttttgtta tacctattac gggtatttta aacaattttt
     2701 ttgcattaat tacgtccctt gttcccgcca cacgaagcgc agcagcaccg ccttttacaa
     2761 ccgattgcat catcgctgtc atacaatctt ctttgtacaa aggttcagat ggcattgcct
     2821 gaacagagac tattactttg ttttttattt gagcaactat attatccata aatttaatta
     2881 taatgctact tttaggtatg ggcaaattgt tttcaacgat ttatcctgaa tataattgta
     2941 actatttgtt aactttagac tgttgtgcct aaagttttga ctttaaattg ccgataagta
     3001 aactgtaagt cgtaaatgaa aaagggagta ttaatcatgg caggttttga aaaatttaaa
     3061 aatgcattaa aaaaagcaga agaagaaaga catgaagagc ttcaacaaga cataagaaaa
     3121 gttcgtaatg ttatagaaaa agttctttcc atggcaatgg aaaacacagc caatgtagca
     3181 agaacacgct atagcgggct ggaaatgttt taagattata aaatcattaa aacatcgcgt
     3241 acaatttttg taacaaccgc agtagaaacc tcgctcttgt cataatcagg ggcgagttct
     3301 actatatcag caccaacaat atcaaaatct ttaagatatt ttatccactc agcaagctct
     3361 ctgtacatca agccgtcagg ttccggagta cctgtgcccg gcataaatgc aggatccagc
     3421 acatccacat caattgttaa aaagattttt ttgtgtttta tctgctctaa atcagcagag
     3481 tttttaacaa gtgtgttgta cttcttcatt aaatcaaatt cttcttgcaa accggaacga
     3541 ataccaatct gttttatatt ttcaaagcct attgtctcac cgattagtct cataacagat
     3601 gcgtgagaaa gtttttcacc cagataatct tctctcaaat ctgtatgtgc atcaaaatga
     3661 ataaccgcta aatcaggata cttttgataa caagctttta atgcaggata agtaacaaga
     3721 tgttctccgc ctatgccaag gtatttttta ccatcttgaa aaacaattct tgcatttttt
     3781 tcaataacat caagcgtttt ttctgtgtta cccaaaggaa actcgagttc acccgcatca
     3841 tagaaattga catcatcaag atgtttgtca tacacaggag aatagtcctc taacccccag
     3901 cttgcaatgc gcagtctttc cggtgcaaaa cggctgcccg gtctgtaaga acaggttccg
     3961 tcaaaaggaa ggcctatcat tacaatatct gcattatcat aactgtcaac agagcctatc
     4021 cagttacggc tcaaaaatgg tcctagagtt tcacttgccg gcattaatta atcccttatt
     4081 ttaattgtct atgagccaac gtttacgcct gtaccttcga ttttttcatc gccctggtca
     4141 tgctgtgatg cagctgcggc tgcggctttt tgttgttcgt tcttagcaga atataaaatc
     4201 actgtaacat cggcaattaa tattcttttg ttgtctgcat aagggacaat actgatttta
     4261 tcaaggttaa tcaagtatgg atagttgtaa atgtcctgaa aatatgaacg gaattgcata
     4321 taatttccga ttaattgcat ttgcactgca caaac
//
LOCUS       DABS01000026            3315 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_609, whole genome shotgun sequence.
ACCESSION   DABS01000026 DABS01000000
VERSION     DABS01000026.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3315)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3315)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3315
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(45..>208)
                     /locus_tag="CPT85_00950"
     CDS             complement(45..>208)
                     /locus_tag="CPT85_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009342453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="DAB26950.1"
                     /translation="YIASQEVIFGASGQILTIRHDSMDRQCYMAGVKLAIKYIAQHNE
                     FIYGLEKIM"
     assembly_gap    209..262
                     /estimated_length=54
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<263..817)
                     /gene="dapB"
                     /locus_tag="CPT85_00955"
     CDS             complement(<263..817)
                     /gene="dapB"
                     /locus_tag="CPT85_00955"
                     /inference="COORDINATES: protein motif:HMM:TIGR00036"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="DAB26951.1"
                     /translation="MVRVGVVGAMGKMGQEVVKAVCNDDTLELVCAVDVNQIDMEVCP
                     PKSVRIIGNLKSAIEMHKPDVMVDFTQPKYVFENAKTCLENGVRPVIGTTGLSDEQIE
                     ELNALSQAKGLGCLIAPNFSTGAILMMMFAKQAAKYFDNAEIIELHHNQKKDAPSGTA
                     IKTALMMSESGNMTFETGNCEETET"
     gene            965..1825
                     /locus_tag="CPT85_00960"
     CDS             965..1825
                     /locus_tag="CPT85_00960"
                     /inference="COORDINATES: protein motif:HMM:PF02878.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26952.1"
                     /translation="MINKQPHSELEKSLFESVDSKTPDYIKKNKLVDLGNKNEXTKEN
                     LEPYNEQTNPNGLNLKDWFKGYAKEAEVSTAGIRGPQNILYPHDTRFPINLIGIMLAT
                     EAKALVAKELYPDNEIIKLAGCEVRYNSQEFLELIARIQAAHGIKTLVPVDRKTIPIW
                     MASFLAFKLDLLGGEYITSSHGISVKNATKDLNSQGSQYLPEESMLFVDKIKYIFDEV
                     EKNGYYDIKIAANDNPLISQAEMKSLNDGVELYKQYLLDGVAKDANLNLIKNSDDKIV
                     IENVXPHTVH"
     assembly_gap    1082..1083
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1805..1806
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1822..3231
                     /locus_tag="CPT85_00965"
     CDS             1822..3231
                     /locus_tag="CPT85_00965"
                     /inference="COORDINATES: protein motif:HMM:PF02880.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26953.1"
                     /translation="MSRILKELGIEDKYVWMNKEEDPFFHSIGKYDTDPKGNKTFYDY
                     SVDATVLSKDKDGKPYFPVIKSLHYDEKLKNCPIGTAVLITDPDHDRLTVCQIESDDK
                     IQYLKSLGIDYVALDKGRILTVFTANQSFLMIMDFWMQQLKNEGLFENHPRFMIKTTA
                     SARSWDEWAKKNNIKVVNVPVGFKEIANVMKKVEKQIMDNPDKEVVVTDVLGNNINLG
                     VNPKLIFGGEESGGMIIGSEELIKSLSGRAAIAMREKSATEAIIVASALAAYLKKQGS
                     SMSEYLDNVFKNNEIISKFDIREDISYYNESEPDIEKLKQAKVAGEAQRTKNDVFYLT
                     MAVAKKAGKMTLEQIREILADTFKDLNFDNLTDVKFVGDGTYLEFDDKFIEIRPSGTD
                     AKTKAYGAGASKEEIKKFAQKMGNYSGDLTDLYKKYVDMNLYDNAKDLSLKDYAVFTN
                     KDANNDKFVIPDYSKTLQF"
BASE COUNT         1106 a          589 c          611 g          951 t
ORIGIN      
        1 atttaaaaaa atatcttctc gccctgtttt ttggatgggt ttagttacat aattttttca
       61 agcccgtaaa taaattcatt gtgttgcgca atgtatttga ttgcaagctt tacaccggcc
      121 atgtaacatt gtctgtccat agaatcatgg cggatagtaa gaatttgtcc ggatgctccg
      181 aaaataactt cctgagatgc gatataacnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      241 nnnnnnnnnn nnnnnnnnnn nntgtttcag tttcttcaca gttgcctgtt tcaaatgtca
      301 tgttgcctga ttctgacatc ataagagctg tcttaatagc tgttccagag ggagcatctt
      361 tcttttgatt atggtgcagc tcaataattt cagcgttgtc aaagtatttg gcagcctgtt
      421 tcgcaaacat catcataaga attgctccgg tcgaaaaatt tggagcaatc aaacatccca
      481 aacctttggc ctgcgacaat gcgttcagtt cttctatctg ttcatcagaa agccctgttg
      541 taccgattac cggacgtact ccgttttcca ggcatgtttt agcattttca aaaacatact
      601 ttggctgggt aaagtcgacc attacatcag gtttgtgcat ttctattgca gattttaaat
      661 ttcctattat tctgacagat tttggcgggc aaacttccat atcaatttga tttacatcaa
      721 cagcacaaac aagctcaagt gtgtcatcat tgcatacggc ttttactact tcttggccca
      781 tttttcccat tgcacctaca acaccgactc ttaccatttt tataatcctt tcattgttat
      841 tattttataa cctatcatta atgttagtat ttttatatta accacataaa ttaatataca
      901 tctttttata atttttgtat aatagataag ttattaaacg gataaatagc ggagagccga
      961 aattatgatt aataagcaac cacacagtga actggaaaaa tccctttttg aatctgttga
     1021 ttcaaaaaca cctgattata taaaaaagaa taaacttgtc gaccttggga ataaaaacga
     1081 anngactaaa gaaaatctgg aaccgtataa tgaacaaaca aacccgaatg gcctgaacct
     1141 gaaagactgg tttaaaggtt atgcaaaaga ggctgaagta tccacagcag gcataagagg
     1201 gcctcaaaat attctttatc cgcatgatac ccgcttcccc atcaatttga ttggtattat
     1261 gctggcaaca gaagctaaag cactggtggc taaagagctt tatccggata atgaaattat
     1321 aaaactcgca ggatgtgaag tccgctacaa ttcacaggag tttttggaat tgattgcccg
     1381 tatacaggcc gcacacggta tcaaaacact tgtgcctgtt gatagaaaaa caattcctat
     1441 ctggatggca tcattccttg ctttcaagct ggatttgctt ggcggtgaat atattacctc
     1501 aagccatggt atctctgtaa aaaatgcaac gaaagacctg aattcacaag gaagccagta
     1561 tttgccggaa gaatcaatgc tctttgttga taaaattaaa tatatttttg acgaagttga
     1621 aaaaaacgga tattacgata tcaaaattgc agccaatgac aatccgctta tttctcaggc
     1681 agaaatgaag tcactcaatg acggtgtaga attgtataaa caatatctgc ttgacggcgt
     1741 tgccaaagat gcaaatctta atttgataaa aaattctgat gacaaaattg ttatcgaaaa
     1801 cgtanntccg catacggtac attgagcaga atactcaaag aactgggtat cgaagataaa
     1861 tacgtgtgga tgaataaaga ggaagatccg tttttccatt cgataggaaa atatgataca
     1921 gaccctaaag ggaataaaac cttctatgac tactctgttg atgcaacagt actttctaaa
     1981 gataaagacg gtaaacctta ttttcctgta ataaaatcat tgcattatga tgaaaaactc
     2041 aaaaactgcc cgataggcac ggctgtactc atcacagacc ctgatcatga ccgattgact
     2101 gtgtgccaga ttgaatctga tgataagatt caatatctca agtctcttgg catagactat
     2161 gttgcattag acaagggcag aattcttaca gtatttactg caaatcaatc cttccttatg
     2221 attatggatt tttggatgca gcaattgaaa aacgaaggcc tgtttgaaaa ccaccccaga
     2281 ttcatgataa aaacaacggc ctctgctcgc tcgtgggatg aatgggcaaa gaaaaacaat
     2341 atcaaggttg ttaatgtgcc tgttggcttt aaggaaattg caaacgtaat gaaaaaagtc
     2401 gaaaagcaga ttatggacaa cccggataaa gaagttgtag taacagatgt tctcggcaat
     2461 aatattaacc tgggcgtaaa ccccaaactc atctttggag gcgaagaatc cggcggtatg
     2521 attatcggtt cggaagagtt gattaaatct ctttccggca gagctgcaat tgcaatgaga
     2581 gaaaaaagtg caacagaagc aattattgtt gcatcagctc ttgctgctta tcttaagaaa
     2641 cagggctcgt ctatgtccga gtatcttgac aatgtgttca aaaacaatga aattatctca
     2701 aaatttgata taagagaaga tatttcttat tacaacgaat cagagccaga tattgaaaag
     2761 ctcaaacagg caaaagtcgc cggtgaagct caaagaacaa aaaatgatgt attttatctg
     2821 acaatggctg tggctaaaaa ggctggcaaa atgacccttg aacaaataag agagatactt
     2881 gccgatacat tcaaagacct gaattttgac aatcttacag atgtaaaatt tgtgggcgac
     2941 ggaacatatc tggaatttga tgataaattt atagaaatac gaccttccgg aacagatgcc
     3001 aaaacaaagg cctacggagc aggtgccagc aaagaagaaa ttaaaaaatt cgcacaaaaa
     3061 atgggcaatt actcgggtga tttaacagat ttgtataaaa aatacgttga tatgaacctt
     3121 tatgacaatg ccaaggatct ttcattaaag gattatgcag tatttacaaa caaagatgca
     3181 aataacgaca aattcgttat acccgattat tccaaaacat tgcagtttta atttcataaa
     3241 aaacattgta taattgcaca tagtgaaata tgtgcaagga gtttagctgt gaattttgag
     3301 atagaaaaag cgttt
//
LOCUS       DABS01000027            2754 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_35841, whole genome shotgun sequence.
ACCESSION   DABS01000027 DABS01000000
VERSION     DABS01000027.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2754)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2754)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2754
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(379..783)
                     /locus_tag="CPT85_00970"
     CDS             complement(379..783)
                     /locus_tag="CPT85_00970"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26851.1"
                     /translation="MRITGYKTYKPAFCAGKAHVYSDFDGTYCPARHVSLHNPELNRD
                     MPEYCSRMKNLFDTAKDNLHFHITSGRTFGEFDAVFWLLKIRDFRLPLPETYIAKNGS
                     DVYLKTGSDENFYNKGIFPFSYKVTDKQKEKX"
     assembly_gap    382..383
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            992..1747
                     /locus_tag="CPT85_00975"
     CDS             992..1747
                     /locus_tag="CPT85_00975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004509218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="DAB26854.1"
                     /translation="MTTVLENINLTVNEGENWVVLGANGSGKSTLMKLFSHDIYPNTQ
                     YEFKKEIFGKDRWDIFELKKNLGIITNDLQNKFLNYGPKTSGMEIVLSGLYSSLGIFQ
                     HHNFTDEQISKAGEVLKYLDIEKLSNKKLCEMSTGEQRRCIIGRSLIHSPRAFILDEP
                     TTGLDIKAQKSFLNLLQKLSQNTSVILITHNIDEIFPQITHAALMYNKTIYKQGKKED
                     ILTSQNLSEIFETEISLKQSDGKYYIAHTKESV"
     gene            1744..2223
                     /locus_tag="CPT85_00980"
     CDS             1744..2223
                     /locus_tag="CPT85_00980"
                     /inference="COORDINATES: protein motif:HMM:PF14853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26852.1"
                     /translation="MTDYKTFLDEGIAEIHKGNFEKGIEKINQSIDLKNDWEIPYFYR
                     AVAYHSLEKYDEAMLDYSKSIQLNEKMTDAYYNRARISLTRKDIQNPDIKKAVEDLEK
                     ALELDEKFLDALYAIAAAHKKLGNYQTALNYLDKLIKIEPDAINAKALKKLIQQKYL"
     gene            2274..>2754
                     /locus_tag="CPT85_00985"
     CDS             2274..>2754
                     /locus_tag="CPT85_00985"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26853.1"
                     /translation="MQLKQITKFLTCSLLTVIVLLQSGCAALNFRHEYDKGMRFYNEK
                     KYNEAIISFNNALNYKPDSYSTLCLLGTSYAYNKDTKMAEKTFQDAIRLFPDQWNAYV
                     FLADIKRSQRDYQVAMDYYETAVTLESMGGKEKLYYKKLLKEIKDEQAAYALKDPIAQ
                     "
BASE COUNT          979 a          479 c          477 g          817 t
ORIGIN      
        1 gaacttttat attattttct tttaaataat tttttagctc gtccataaaa ttgtcataaa
       61 tccaatttct ttcagagcaa ggtccgtagt caggagaaaa tataagatgc gtttttagat
      121 taccatcgtt tcttgaccca attttgtaat ctgcaacagg ttcttcgtgc gcaataaatt
      181 ttatagaacc gccatcggtt tcataaggca gttttttcca ttcatctgaa ttgagcttgc
      241 ctttggaaaa aagtgatttt tcgccgtaat ttgcaacact gttttctgta tcagcttcaa
      301 taagatttat gcaatatttg tttgaaagat ttctaataaa tgatttgata tttgcgccat
      361 cccagttagt cagttttttt annctttttc tttttgcttg tccgtgactt tataggagaa
      421 agggaatatt cccttgttat aaaaattctc atcggaaccg gtttttaagt aaacgtcact
      481 gccgttttta gcaatatatg tttcaggaag aggaagccta aaatctctta tttttaacaa
      541 ccagaacacc gcatcaaact caccgaacgt tcttcctgat gtgatatgaa aatgcaaatt
      601 atcttttgca gtgtcgaaca aatttttcat tctgctgcaa tattcaggca tatcccggtt
      661 taattcagga ttgtgcagcg agacatgtct tgcgggacag taggttccgt caaagtccga
      721 atagacatgt gcttttccgg cacagaatgc aggtttataa gttttgtatc cggtaattct
      781 catagaaaat tacaatctct cttgttaata cctttatatt taaaggctgt caaaaatttt
      841 tttgctatta tttaaagaat ttgttacaaa ttataaccgg ttttattcta taattactta
      901 ggtacaacaa atataacagt ggaaatttaa cttgaacagc gcaaaaacac atcaaattat
      961 agattttaaa aatatacatg ttaactatgg aatgacaact gttctggaga atattaacct
     1021 gactgtaaat gagggagaaa actgggttgt tcttggagcc aatggcagcg gcaaatctac
     1081 gttaatgaaa ctcttctcgc acgacatcta tccaaacaca cagtatgagt ttaagaaaga
     1141 aatatttggc aaagacaggt gggatatttt cgaattaaaa aagaatctcg gaataattac
     1201 aaatgatttg caaaacaaat tcttgaacta cggccccaaa acaagcggta tggaaattgt
     1261 tttaagcggt ttgtacagct ctcttggtat ttttcagcac cataatttta ctgatgaaca
     1321 gatatctaaa gcaggcgaag tgttgaaata tctggacatt gaaaaacttt ctaacaaaaa
     1381 gctgtgtgaa atgagcacag gtgagcagcg cagatgtatt ataggccgtt ctttgataca
     1441 tagtccgcgg gcttttattc ttgatgaacc aacaacagga ctcgatataa aggcacaaaa
     1501 aagttttttg aatctgctgc aaaaactttc tcaaaacaca tcggtaatac ttattaccca
     1561 caatattgat gaaatatttc cccagattac acacgctgct ttgatgtaca ataagacaat
     1621 atacaaacag ggcaaaaagg aagatatcct gacttcacaa aacctgtctg aaatatttga
     1681 aactgaaatt agtttaaaac aatctgacgg aaaatattac attgcacaca caaaggagtc
     1741 tgtatgacag attataaaac atttctggat gaaggcatag ccgaaataca caaaggaaac
     1801 tttgaaaaag gtattgaaaa gataaaccaa tccattgatt taaaaaatga ctgggaaatc
     1861 ccttattttt acagggctgt ggcataccac tcgctggaaa agtatgatga ggcaatgctc
     1921 gattattcaa aatcaataca gctcaacgaa aaaatgacag atgcatacta caaccgtgca
     1981 agaataagcc ttacaagaaa agatatacaa aacccggata taaaaaaagc tgtagaagat
     2041 cttgaaaaag ctcttgagct ggatgaaaaa tttcttgatg cactttatgc aatagcagct
     2101 gctcacaaaa aactgggcaa ttatcaaaca gcgctcaatt atctggacaa attaataaag
     2161 atagagccag atgcaatcaa cgcaaaagcg ctaaaaaaac ttatacagca aaaatacttg
     2221 taaaatattg cccgatacat ctcctgtcat tataattaat atcaggggac ataatgcagt
     2281 taaaacaaat tacaaaattt ttaacctgtt cattgcttac tgtaatagta ctattacaga
     2341 gcggttgtgc ggctttgaat tttcgtcacg aatacgacaa aggtatgcgc ttttacaacg
     2401 aaaaaaaata caacgaagcc attataagtt ttaacaatgc tcttaactac aagcctgatt
     2461 cttacagcac actttgcctg cttggaacaa gttatgctta taacaaagac acaaaaatgg
     2521 cagaaaaaac ttttcaagat gcaataagac ttttccctga ccagtggaat gcgtatgttt
     2581 ttcttgcaga tataaaaaga agccagagag actatcaagt agctatggac tactatgaaa
     2641 cagctgttac tctggaatct atgggaggca aagaaaaact gtattataaa aaactgctga
     2701 aagaaataaa ggatgaacag gcagcctatg cattaaaaga cccgatagca cagc
//
LOCUS       DABS01000028            5878 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12108, whole genome shotgun sequence.
ACCESSION   DABS01000028 DABS01000000
VERSION     DABS01000028.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5878)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5878)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5878
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            116..1579
                     /locus_tag="CPT85_00990"
     CDS             116..1579
                     /locus_tag="CPT85_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018249226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit A"
                     /protein_id="DAB26846.1"
                     /translation="MEELLKKTSSEQRKALLNKEISAQELVNAHYARIEKVDSTLGAY
                     NSLCKEQALETAKNVDEKIAKGEPLPPLAGIPLALKDNINLKDTKTTASSKILENFVS
                     PYDATVSTKLKENLIPILGKVNLDEFAMGSSTENSAFKITRNPWDTNKVPGGSSGGSA
                     AAVAGYEATLALGSDTGGSIRLPASFCGIVGMKPTYGRVSRYGLIAFASSLDQIGPFA
                     RNVEDTALLLEAISGHDHHDSTSLDIPVPAFSKALNKDIKGSKVGVIKELLAEGVSPD
                     VKNAVENAIKMYKELGAEIVEISLPLLEYSIGVYYILATAEASSNLARFDGVKYGHRT
                     KEPKNLLEMYTKTRAEGFGDEVKRRIMLGTYALSAGYYDAYYKKAQQLRRLIKEDFDR
                     AFEKVDILVSPTCPNTAFEIGSKIEDPLSMYLTDIGTISANLAGIPGMSLPCGYDSDG
                     MPIGLQILAPALQEEKLFNMAYNFEQAAKDIQRQPNL"
     gene            1606..2463
                     /locus_tag="CPT85_00995"
     CDS             1606..2463
                     /locus_tag="CPT85_00995"
                     /inference="COORDINATES: protein motif:HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26847.1"
                     /translation="MKKLLTNIGLTLSLSLILAAGAANSAFAYSTEGAMYYNEGLDLY
                     SRGEYAKALQSFKTAVAKDPDFIDAYYNMGALYEYLKSYNSAIASYSKIYQLDPNDKE
                     TVLKLSELYFKLGNYERALFYITKINENDDLYGKAQSLKNQIVVASQKAAAKNALANN
                     NSANETNKTIVDKFSGPTGLAIDSKGILYVASYTDNSIYKVMPNGQSQLFSKSPLLGG
                     PIGLAFDSMDNLYVANYAKSNILKINKAGQVYTFMNKITNPYYLIIKGNYMYITEQGN
                     NTVIKYKLY"
     gene            complement(2536..3735)
                     /gene="nifS"
                     /locus_tag="CPT85_01000"
     CDS             complement(2536..3735)
                     /gene="nifS"
                     /locus_tag="CPT85_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016865869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase NifS"
                     /protein_id="DAB26848.1"
                     /translation="MSEKTVYLDNNATTMVDPQVFEAMKPYFCDLYGNPSSMHEFGGQ
                     VMHAVDKAREQVKDFLGARDAKEIIFTASGSEGDNMAIRGVLEANKNKKHIITTKIEH
                     PAVLNVYKYLEKQGYDVTYLDVDSKGNLDLNQLAESITDETALVSIMYANNETGVILP
                     VEKAAKIVKAKNPKIKFHSDAVQAAGKIPLDVKNTDIDLLTIAGHKIHAPKGIGALYI
                     KTGTLLPAFVIGGHQERGKRAGTENVPYIVGLGKACELAQKSLDYEMTEVKRLRDKLE
                     NGILDSIYNAKVNGSTSNRVPNTTNIGFQYIEGELILLHLSNLGICASSGSACTSGSL
                     EPSHVLKSMGVPFEALHGSIRFSLSRFTTDDEIEYTLKVLPDVIFKLNKISPYQRELK
                     ELAEKHK"
     gene            complement(3738..4559)
                     /gene="nifU"
                     /locus_tag="CPT85_01005"
     CDS             complement(3738..4559)
                     /gene="nifU"
                     /locus_tag="CPT85_01005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011368834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein NifU"
                     /protein_id="DAB26849.1"
                     /translation="MWDYTDKVMDHYKNPRNVGEIENPSAIGEAGSLVCGDALKLYLK
                     VDDNGVITDAKFQTFGCGSAVASSSVLTEMLKGMTIEEASKITNQQIADALGGLPPQK
                     MHCSVMGHEALESAIANYKGEDSATHCDEKIICTCYHVTENALREAIEDNNLTDLEDV
                     MNYTKAGGACGQCHVAIQKIIDEIRNKKEKIDIKNMSVTQLVLKINNVIEKYISNELR
                     KDGGDIELIDVKDNKVFVALKGMCKSCKFSSNTLKNFVEASLKEHISPDIEVVEV"
     assembly_gap    4949..4950
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5073..5825)
                     /locus_tag="CPT85_01010"
     CDS             complement(5073..5825)
                     /locus_tag="CPT85_01010"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26850.1"
                     /translation="MGLAASQARLLLLTARKSDLEYRAQQITNAEMILAMQTETVARE
                     YSIKISNQTIKYIDANSQDQTTTDLSASALLGIAGGAYKLQLKAGVDENGNPIWNDWT
                     PKYEQKETGNWIDGNGNVIDQDAYDVLSEADKAKCTKEMKDTSKIVNDKTGPEILEGI
                     NNGSMRIVDANGEAISLSSTTGFTQTYYTDDDARAEAEYNTKTASIQVKEKRLQNDLQ
                     QVETQQKACDTEIDSVKKVMEKNIERTFKVFS"
BASE COUNT         1814 a         1116 c         1029 g         1917 t
ORIGIN      
        1 ttaatgtaac aatatcggta agtaacaaca ctaactcatt tttagactat aattatttat
       61 atagaattta ataaattttt tgaaatagta aagacagagg aataaataaa gaagtatgga
      121 agaattgctt aaaaagacgt catcagagca aagaaaagct cttttaaata aggaaatttc
      181 agctcaagaa cttgttaatg cacattacgc aagaattgaa aaagttgatt caacacttgg
      241 agcatacaat tcattgtgca aagagcaagc tcttgaaaca gcaaaaaatg ttgatgaaaa
      301 aatagctaaa ggtgaaccgc tgcctcctct agcaggtatc cctcttgcat taaaagacaa
      361 catcaacctt aaagatacaa aaactacagc gtcgagcaaa attttggaaa attttgtatc
      421 accttatgac gcaacagttt ctacaaagtt aaaagaaaat ttaattccga ttcttggtaa
      481 agtgaacctt gatgaatttg caatggggtc ttctactgaa aactcggcat ttaaaattac
      541 cagaaacccc tgggatacaa ataaagttcc aggaggaagc tccggtggtt cagcagcagc
      601 tgttgcaggt tatgaggcaa cacttgctct tggttctgat acaggcggaa gtattcgtct
      661 tcctgcaagt ttttgcggaa ttgtcggtat gaaacctact tacggaagag tttcaagata
      721 cggtcttatt gcttttgctt catcattaga ccagattggc ccttttgcaa gaaatgttga
      781 agacactgct cttttactcg aagcaataag cggacacgac catcacgatt ccacatcttt
      841 ggatattcct gttcctgctt tttcaaaggc gttgaataaa gatattaaag gctccaaagt
      901 cggtgtcata aaagagcttc tggcagaagg tgtttcaccc gatgtaaaaa atgccgttga
      961 aaatgcaata aaaatgtaca aagagcttgg tgctgagatt gtagaaatat cactgccgct
     1021 tcttgagtat tcaataggcg tatattacat cctggctact gcagaagcca gctcaaacct
     1081 tgcacgattc gacggtgtaa aatatggtca caggacaaaa gagccaaaaa accttcttga
     1141 aatgtataca aaaacaagag cagaaggttt tggagacgaa gtaaaaagaa gaataatgct
     1201 tggtacatat gctcttagtg cgggttatta tgatgcttat tacaaaaaag cacagcagtt
     1261 aagacgatta atcaaagaag attttgacag agcctttgaa aaggtagaca ttcttgtttc
     1321 acctacctgc ccgaatactg cttttgaaat aggttctaaa attgaagatc cgttaagcat
     1381 gtacttaaca gatatcggta caatcagtgc aaaccttgcg ggtatacccg gaatgagcct
     1441 tccttgtggt tatgactctg acggaatgcc aatcggcttg cagatacttg cacctgcact
     1501 tcaggaagaa aaattattca acatggctta taattttgag caggcagcaa aagatataca
     1561 aagacagcca aatctgtaat taaaataata gaaattggag aaaagatgaa aaaattatta
     1621 acaaacatcg ggttaacatt aagtttatct ctcattctcg ccgcaggtgc tgcaaacagc
     1681 gcgtttgcat attctacgga aggcgcaatg tattacaatg aaggtctaga cctttattca
     1741 agaggcgagt acgctaaagc actccaatct tttaaaacag cggttgcaaa agaccctgat
     1801 tttattgatg catattacaa catgggtgca ttgtacgaat atttaaaaag ctacaactct
     1861 gcaattgctt cttactcaaa aatatatcaa cttgacccta atgacaaaga aacagttctt
     1921 aagttatccg aactctattt caagctcggt aactacgaaa gagcattgtt ttacataact
     1981 aaaattaatg aaaatgatga cctctatggc aaggctcaaa gccttaaaaa ccaaatagtt
     2041 gtcgcgtcac aaaaagcagc agcaaaaaat gcccttgcaa acaacaattc tgctaacgaa
     2101 acaaataaaa ctatagtaga taaattctca ggtcctaccg gtcttgctat agactcaaaa
     2161 ggtattttgt atgttgcaag ctacacagat aacagcattt acaaggtgat gccaaacgga
     2221 caatctcaac tgttttcaaa aagcccgctg cttggcggcc ccataggtct tgcttttgac
     2281 tctatggaca acctctatgt tgcaaactat gcaaaaagta atattttaaa aattaacaaa
     2341 gccggtcagg tatacacatt tatgaataaa attacaaacc cgtattacct cattataaaa
     2401 ggcaattata tgtatattac agaacagggc aataacactg ttatcaaata taaattatac
     2461 taaaattcaa taaaaaatcc cggtttataa agaccgggat tttttttaat tcgaaaagcg
     2521 tcatttactc gataattact tgtgtttttc tgcaagctct ttaagctctc tttgataagg
     2581 agaaatctta tttagcttga aaataacatc aggcaaaact tttagagtgt attcaatttc
     2641 atcgtcagtc gtaaatctgc ttaagctgaa tcttatgctt ccgtgaagtg cttcaaaagg
     2701 cacacccata gattttagca catggcttgg ctcaaggctt cctgatgtac aagcacttcc
     2761 ggagctagca caaataccca aattactcag gtgaagaaga ataagctctc cttcaatgta
     2821 ttgaaaacca atattcgtag tattaggcac cctgtttgag gttgaaccgt ttactttggc
     2881 attataaata gaatccaaaa ttccattttc aagtttgtca cggagccttt taacctctgt
     2941 catttcatag tccaaagatt tttgtgcgag ttcacaggct ttaccgagcc caactatata
     3001 aggcacattt tcagtaccgg ctctttttcc gcgttcttga tggccgccaa tgacaaaagc
     3061 aggcagtaat gtacctgttt tgatataaag agcgccaata ccttttggag cgtgtatttt
     3121 gtgaccggct atagtaagaa ggtctatatc cgtatttttt acatccaaag gtattttgcc
     3181 agccgcctgg actgcatctg aatgaaattt aatttttgga tttttggcct taacaatctt
     3241 tgcggctttt tcaacaggca aaattacccc tgtttcgtta ttggcataca ttatacttac
     3301 cagtgcagtt tcgtctgtta tagattcggc cagctggttc aagtcgagat ttcctttaga
     3361 atcaacatca agataggtaa catcatagcc ttgtttttcc aaatatttgt aaacattgag
     3421 aaccgccgga tgttctattt ttgttgtaat tatgtgcttt ttatttttgt tagcctccag
     3481 cacacctcta attgccatat tatcgccttc agagccagat gcagtaaaga taatttcttt
     3541 tgcatctctt gcgccgagaa aatctttaac ctgttctctt gccttgtcta cagcgtgcat
     3601 aacctgaccg ccaaattcgt gcatactgga agggttgccg tataagtcgc aaaaatatgg
     3661 tttcattgcc tcaaatactt gagggtcaac cattgtggtt gcgttgttat caagataaac
     3721 tgttttttca gacattttta cacctccact acttcaatat ctggagaaat gtgctccttt
     3781 aatgaagctt ctacaaagtt tttgagcgta tttgacgaga atttacaaga cttgcacatc
     3841 ccttttaaag caacaaaaac tttattgtct tttacatcaa tcagttcaat atctccgccg
     3901 tcttttctaa gttcattgga aatatatttt tcaatgacgt tattgatttt caaaacaagt
     3961 tgtgtaacag acatgttttt aatatcaatt ttttcttttt tatttctgat ttcatcaatt
     4021 attttttgaa tcgcaacatg gcactgaccg caagcgccgc ctgctttggt gtaattcatt
     4081 acatcttcaa gatcagtaag attgttgtct tcgatagctt ctctcagagc attttctgta
     4141 acgtggtaac aggtacaaat gattttttca tcacagtgag ttgcagaatc ttctccttta
     4201 taattggcta tcgcagactc aagcgcctca tgccccataa cagaacagtg cattttttgc
     4261 ggaggcagcc cgcctaatgc atctgcgatt tgctggtttg ttattttcga tgcttcttct
     4321 attgtcatac cctttaacat ttcagttaaa acacttgatg aggctacagc agagccgcaa
     4381 ccaaatgttt gaaattttgc atcggtaata actccgttgt catcgacttt taaatacaat
     4441 tttaaagcat cgccgcaaac aagagaacca gcctcaccaa tggcggaagg gttttctatc
     4501 tcgccgacat ttctcggatt tttatagtga tccatcactt tatctgtata atcccacatg
     4561 atttatttcc tttatataag atactcattt acaccaatat tttagcgcaa aggacatgat
     4621 tattaaacag aagaaagtat atatcgattt gtaaactttt tttacaatac atagtaaaat
     4681 attaaagttt tgccaatcaa atccgatata taaaacacag ggaatgaaat gtaatgaagg
     4741 agtaaattat ggaaaactac tggcctagtg cgtacagttt taagcttgaa ttaaaaattc
     4801 ttcttgaaat tattaaacaa cagattgata cagtacttgc aaagattgaa aaagcagatg
     4861 caatgacaag ataatatgaa aaagataagt gtgtaaaaaa aaccgtccgc gtaagtaaag
     4921 gacggttttt tatttagggt cgcgcatcnn cctataaaca ctgtatttgt caaaatatag
     4981 ctctaaagag ccctgtcttt aaaccaataa gtccgctttg aaaatatcaa aacggactta
     5041 aatcttttag ggtcgcgcat caaaactatt tattaagaaa atactttgaa tgttctttca
     5101 atgttctttt ccataacttt tttaacagaa tcaatctcag tatcacaagc tttttgctgt
     5161 gtttctacct gttgcaaatc attttgcaat cttttttctt ttacttggat agatgctgtc
     5221 tttgtattgt actcagcttc tgctcttgca tcatcgtctg tataatatgt ctgtgtaaat
     5281 ccggttgttg agctcaatga gattgcttcg ccgtttgcat ctactattct cattgatcca
     5341 ttgttgatac cttctaaaat ttccggacct gttttgtcat ttactatttt tgaagtatct
     5401 ttcatttctt ttgtgcattt tgctttgtct gcttctgaca atacatcata tgcatcctga
     5461 tctattacat tgccgtttcc gtctatccag ttgcctgttt ctttttgttc gtattttggt
     5521 gtccagtcat tccagatagg gttgccgttt tcgtctacgc ctgcttttaa ttgaagtttg
     5581 tatgcaccgc ctgctattcc caaaagtgct gatgctgaca aatctgttgt tgtttggtct
     5641 tggctgtttg cgtctatgta tttgattgtt tggttgctaa tttttattga atattctctt
     5701 gctactgttt ctgtttgcat tgcgagaatc atttctgcgt ttgttatttg ttgagctctg
     5761 tattcaaggt ctgattttct tgctgttaat aataacaatc ttgcttgtga tgctgctaaa
     5821 cccattttcg ttgctccttg cttacttact ttttcttact tacatttata taaaaaca
//
LOCUS       DABS01000029           11317 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_4128, whole genome shotgun sequence.
ACCESSION   DABS01000029 DABS01000000
VERSION     DABS01000029.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 11317)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 11317)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11317
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..544)
                     /locus_tag="CPT85_01015"
     CDS             complement(<1..544)
                     /locus_tag="CPT85_01015"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26836.1"
                     /translation="MGEIALINSVSQKDVKNTGNVNNKVLNSKNSTVSIHGDKILQNK
                     DVSLSSSDMFAVLSDDSQRIADNANNLKEMGVSALQSVAVTVSNKAVNIISSASNECF
                     KYDGELNKILEDSSLSPDEKKSKISLIKSKKESVIKEAEKKVSLLEKISDKLSQMAPA
                     FLQLKYMQVDTTELTKPLMSL"
     gene            complement(621..1250)
                     /locus_tag="CPT85_01020"
     CDS             complement(621..1250)
                     /locus_tag="CPT85_01020"
                     /inference="COORDINATES: protein motif:HMM:PF00300.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="DAB26837.1"
                     /translation="MLFKRKCKITFIAHGATLYTEENRICDKESHPPLNEQGQEEAER
                     IAKWIIHRSPRVDKIYTGASLSCVQTAQYVAKEYGQDFEIRPELRNQEYGEWKGLSYT
                     EIEERYPDQLQKYHDLTSSYAPEGGETLLEFDERVDATINNLIEENLTRRIIVVTHSN
                     FIRAAIRNALDIPVENQNRVFIPTGSASQVKYYKGWNILMYSGHIPLFL"
     gene            complement(1379..2533)
                     /locus_tag="CPT85_01025"
     CDS             complement(1379..2533)
                     /locus_tag="CPT85_01025"
                     /inference="COORDINATES: protein motif:HMM:PF00395.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26838.1"
                     /translation="MKKLLTKALMLAAILGFTSAATFAKDYADLPKDHWAYKQIQILT
                     DFNVVVGYPDGNYRPEQNVTRAEFATMVIKAFEQQKAEIKQPAKFTDVSEKDWFYGMV
                     QRALMFDLLKGYPDGHFDPYGNVSRGHVISTTVNALTTETISNQKAKEILENSYSDYD
                     QIPDWLIIAAGKAEILGMVVKAPGEETVINAERPATRAELAAFLVKMLEQAKLNPNAK
                     LKEAMSPRTGEGIIIPTTTLEGYIATIPAGTVIPIMVLNKSITSQKSKAGEQFLSKLP
                     KNLITKEKYLLLVENDALNGKIASVKVGRLFIRNGEVTMETHTITTDKNQTAAFCGDA
                     LGGYRPEGFWKTLYLKVVKGHRVQIKEGDILNLKLNKPVRIDLTNGMILE"
     gene            complement(2633..3346)
                     /locus_tag="CPT85_01030"
     CDS             complement(2633..3346)
                     /locus_tag="CPT85_01030"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26839.1"
                     /translation="MTEDIQILKEIEKAAALCEKQYTREDIFCVLNTPSTDCPDIDVE
                     KQICILKLDTINSQQEADLLVFHQTNHHGLIREACSQKINEFMKKADICVFFQTKEIH
                     DTLLKAANDINPNICRAIIEILPYVNDKNYLLDKLYKRFDEVFEELEKLKRSNWYTKK
                     LFNLYWCLEALHALNPPYDKRIENVLSKTSKFKDYTIREKTAMVLSALVYSSEVLNNI
                     KSALKTDDNFYVRRYSRDF"
     gene            3451..3654
                     /locus_tag="CPT85_01035"
                     /pseudo
     CDS             3451..3654
                     /locus_tag="CPT85_01035"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    3465..3478
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    3665..3677
                     /estimated_length=13
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3716..4297
                     /locus_tag="CPT85_01040"
     CDS             3716..4297
                     /locus_tag="CPT85_01040"
                     /inference="COORDINATES: protein motif:HMM:PF04028.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26840.1"
                     /translation="MFYNCKNINFPKEKPAIFALWHAHQCALYANEDRGNLNVMISKS
                     LDGDIIAAATEHMGIKVVRGSHKRSGAAASLALIEKLEQGECAAITIDGPRGPFGVVK
                     DGVINIAKLTQVPIIPMVWYSPSKWLLKFNTWDNFRFPLLGVKTIAVYGDPIYVPSDC
                     SKEEAESYRLKVENALKDLYKYAQDNFDELVKS"
     gene            4408..5451
                     /locus_tag="CPT85_01045"
     CDS             4408..5451
                     /locus_tag="CPT85_01045"
                     /inference="COORDINATES: protein motif:HMM:PF01380.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26841.1"
                     /translation="MTSIMKKEIFEEPGVVKNLIQNYVTPNDKINIDLPQKVDNIVIV
                     ASGSSYNCAAIAAPLFIEYANIPCECEYSSEFILQKKHFITPDSLYIFVSQSGETSDT
                     LNALKMIKQEGVKTMCITNAKDSAMWKLCDYKILSDAGEEKSIASTKALTAQILCSML
                     VLLKLKHKNNSDISGYLNTLRRLPAYLERIKSDEEKIEETAKTVATYNNISILGNKNY
                     YPIAKEGALKIKETCYLNVMAYPFGEFMHGHVAVLNQKSIVIAIIDEENAQFAVRNLK
                     KIKEEYNPQIVCITSVQEVQAGDINIYIKTKRKMKAIFGSLMTLQLIACKMAAILDKN
                     PDSPKGLKKVVKD"
     gene            complement(5448..6803)
                     /locus_tag="CPT85_01050"
     CDS             complement(5448..6803)
                     /locus_tag="CPT85_01050"
                     /inference="COORDINATES: protein motif:HMM:PF04107.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26842.1"
                     /translation="MLNAKINTQENLITDESQLTNIFYNGAKDECVLSQKRTGVEFEK
                     LPVKKDTFKYAPYQDVAKFLLAYKEEKDGIYENGAILGLSNNDGTVTLEPGSQTELSL
                     NPSSDLNSVKRFIDVYNKKTSQIAEQFGIYWLGYGIQPVSTYKNIHIIPKKRYEYMTK
                     YLPTVAKKPLVMMRETSGIQASFDYKDEADAMRKFAFALKLSPIVSAAFANSPVRNGR
                     LTKYKSNRAASWLDTDNDRCGLVSAKVFNSHFGFEDYAKILLDVPMIFIERTINGVKT
                     AIRVENITFKEFIKHGWQGFRAEEQDWETHLSLYFPDVRLKTYIEIRNHDNQRSPLIC
                     AVPALWKGLIYNNDAMSAVEDMLCNLTYFDYEYLRRKTPQYGIDMKIKHHFVADIVYE
                     IAKISAASLKLDGNNEEHLIDPLLELLAQKKTPADILIGKWENEWRADVSRLVQYSRL
                     S"
     gene            complement(6797..>7642)
                     /locus_tag="CPT85_01055"
     CDS             complement(6797..>7642)
                     /locus_tag="CPT85_01055"
                     /inference="COORDINATES: protein motif:HMM:PF02955.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26843.1"
                     /translation="TEGNVAKTLCWQAYEKDGDIFYKKDEPKKYVIEHFDVVFFRPDP
                     PVDIDYINACSVFDYVDTERTVVINNPIAVKNFNEKFHLNYFPEFAPENIVTASAEEI
                     KAFVREHKKAIIKPLNQCFGGGVYYLDTEERNINTIIKNLTNNGKTMVMVQRYLEGAV
                     HGDKRILIVGEHVFEECIRKLPGKDDFKFSEHSDKYFETTHLTAEEKEMAQKVAKHLN
                     AVELYMVGLDVADGKIMEINVTSPCYFIREINSHNNERFQDVLMEKLINLIELKQGKI
                     PATVC"
     assembly_gap    7643..7669
                     /estimated_length=27
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7888..8247
                     /locus_tag="CPT85_01060"
                     /pseudo
     CDS             7888..8247
                     /locus_tag="CPT85_01060"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
     assembly_gap    8104..8129
                     /estimated_length=26
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(8289..8744)
                     /locus_tag="CPT85_01065"
     CDS             complement(8289..8744)
                     /locus_tag="CPT85_01065"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26844.1"
                     /translation="MRINAFNTVNTHLSFSSKKENDSTYWLIKNPESAQDKLEKHFAL
                     DFIKRFPNWEQNENLVHRLKQDTIKSRAQGKLHSKWHEFDTFPGVSALAFSALTILSL
                     LVLLKNKNLNKSEKILFKTAAVLSPIFAIDNLMYIFTGSNLFDKRKSNK"
     gene            complement(9047..>11317)
                     /locus_tag="CPT85_01070"
     CDS             complement(9047..>11317)
                     /locus_tag="CPT85_01070"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26845.1"
                     /translation="KEINTAYKKLKDLYSYDSISDERKEYLKNLIEENGYLPFPYIKA
                     IEELSHAEILYGLEIKWKHNSVFDEEKGEFKFDNDKISPAQRADYKNGDWLKKEQHNV
                     KLINLAGLGDGNKTQETGKLIDWLRQVLILPSGMPDKGVLGTTVYLIPFHPREFGCAY
                     LPVSTEVSPHIEDKRITEKLGLDTKQQVQLFVKLAQLAGHCVIYDVLPQTGRFSKMVL
                     ANPSIARWYDIKELIEKIEKEADSAYEKLKTEFEPEDVEIVRDIYKATLKKGSNDLSE
                     HYQVIYDKFEELISPKKKEFSDEMMKKENQIKIHNRAKELIAGVNDFKQNKNIEEDDI
                     KKQGETIQLLIQEGLWPAPGGAWCSCGTPVFDRMSDTGDYPMFRHFDFKCEDVTHFAN
                     LDCQTPYYFVFLETGEYNKPVIDVYINYLKKLQKDYNFDGFRVDHIDHIVDEVSEKDG
                     VPISYRAPREVLGRANKELKADVAHFATLAEYMLWDRYYKEYHDDMAFDVLWGNDIIS
                     QFSKTPQAIVEDNQELERFNIADSDSKFGNLSILKSYNNQDGEFRAIDQYPGQLGERG
                     ALFKWFKYKFLPGGKNAQRPVMFIDGDESFTKTGMESVIGAEVSMPREKDYKFFNKFN
                     AVNKFALQNELTREGEAEIITQDDDGFVSWMVSKDPLKESLLIVANYNSPTEKVTETH
                     EDGYSNSYIKPGETVYNKQVQMPCDYMIVSEYIYKESGKIGESEFEEVKFEKPESELH
                     FGELKPAEFKIYKIVK"
BASE COUNT         3382 a         2077 c         1988 g         3790 t
ORIGIN      
        1 tcaatgacat caggggttta gtcagctctg tggtatccac ttgcatatat tttagctgta
       61 aaaaagcagg tgccatttgt gaaagtttat ctgaaatttt ttctaataaa ctgacttttt
      121 tttctgcttc ttttatgact gattcttttt tggatttaat caaactgatt ttgctctttt
      181 tttcatcagg tgataaggag ctgtcttcaa gaattttgtt taattcacca tcgtatttaa
      241 aacattcatt gcttgcagag ctgattatat tgacagcttt gttagaaaca gtaactgcca
      301 ctgactgtaa tgcggaaacg cccatttctt ttaagttgtt ggcattatct gcaattcttt
      361 gagaatcatc actaagcact gcaaacatat ccgaagaaga taaagaaaca tctttgtttt
      421 ggagaatttt gtctccatgg attgatactg tagaattttt agagtttaaa accttgttat
      481 taacattacc ggtatttttt acatcttttt gtgaaacaga attaattaat gcaatttctc
      541 ccaaagaaaa atcctcccgt attgtcttta tatatattta aaaacattta cggaaggatt
      601 attgcatatt ttaataaaac ttataaaaac aaaggaatgt gacctgaata catcaaaata
      661 ttccatcctt tataatattt tacctgactt gcactacctg ttggaataaa tactctgttt
      721 tggttttcta caggaatatc aagagcattt ctaatagcag ctctgataaa gtttgagtgc
      781 gttacaacaa taattcttct tgtaagattt tcttcaatca aattgttgat tgtagcatcc
      841 actctttcat caaactcgag caaagtttct ccgccttccg gtgcatagct agaggtaaga
      901 tcatgatatt tttgcagctg atcaggataa cgttcttcta tttctgtgta gctcaggcct
      961 ttccattcgc catattcctg attacgcagc tcaggtctga tttcaaagtc ctgtccgtat
     1021 tcttttgcca catattgagc tgtctgcaca cagcttaaag aggcacctgt ataaattttg
     1081 tccacacgcg gagaacgatg aattatccat tttgcaatgc gctcagcctc ttcctgacct
     1141 tgttcattca acggcggatg tgattcttta tcacatatac gattttcttc cgtatataag
     1201 gttgcaccgt gtgcaataaa ggttatttta cattttcttt taaaaagcat agcgtctctc
     1261 cgttgttgtg tattttatta atcggacaaa aatacaaaaa ctttaatacc aaattcacaa
     1321 ataaattaaa agaccgagat tattaaaatc ccggtcttat tttatttgta agctgaaatt
     1381 attccagaat cataccgttt gtaaggtcaa ttctcacagg tttattgagt ttcaaattca
     1441 gaatatcgcc ttcttttatt tggactctgt ggccttttac aactttgaga taaagagttt
     1501 tccaaaagcc ttcgggtctg taaccgccca gagcatcacc gcaaaaagca gctgtctggt
     1561 ttttgtcagt agtgatagtg tgtgtttcca ttgtcacttc accgtttctg ataaagagtc
     1621 tgcccacttt gacactggct attttgccgt taagagcatc attttctaca agaagaagat
     1681 atttttcttt tgtaataagg tttttaggta attttgaaag gaactgttca ccggcttttg
     1741 atttttggct ggtgattgat ttgttcaaaa ccataatagg aatcactgtg ccggcaggaa
     1801 tagtagcaat atagccttcc agcgtagttg taggtattat gataccttca ccggttctgg
     1861 ggctcatagc ttctttgagt tttgcatttg gatttaattt tgcctgttca agcattttta
     1921 ccaaaaatgc tgcaagctct gctcttgttg ccggtctttc agcattgata acagtttctt
     1981 ctcccggagc tttaacaacc ataccgagaa tttctgcttt acctgcagct attattaacc
     2041 aatcaggaat ttggtcataa tcagaatagc tgttttcgag gatttctttt gctttctgat
     2101 tagagattgt ttctgtagtc aaagcgttaa cagtagtaga aattacatgg cctctggaaa
     2161 cgtttccgta agggtcaaaa tgtccgtcag gataaccttt taaaaggtca aacataagag
     2221 ctctttggac cattccgtag aaccagtctt tttcagatac gtcagtaaat tttgcaggtt
     2281 gtttgatttc tgctttttgt tgttcaaaag ctttaattac cattgttgca aattctgctc
     2341 ttgtaacatt ttgttcaggt ctgtagtttc cgtcagggta acctactacc acattaaaat
     2401 cagtcaaaat ctgaatttgc ttgtatgccc agtggtcttt tggcaaatcg gcatagtctt
     2461 ttgcaaaagt agcagcagac gtaaagccta atattgctgc gagcatcaaa gctttagtta
     2521 aaagtttttt cataaccgtc tccttaattc taaacaccgt gtgctattag ctagattcta
     2581 ccagcgaaac agccatgttg caagaaaacg ttatataaat ttaccaataa gattaaaaat
     2641 cacggctgta gcgtcttacg taaaaattgt catctgtttt gagtgcagat tttatgttgt
     2701 tcaagacctc ggaagaataa accaaagcgg aaagtaccat tgctgttttt tcacgtatag
     2761 tatagtcttt gaatttagat gtttttgaaa gcacattttc aatacgttta tcgtaaggcg
     2821 ggttaagagc atgcaaagct tcaaggcacc agtacaaatt aaagagtttt ttagtatacc
     2881 agttacttct ttttagtttt tccaattcct caaacacttc atcaaagcgt ttgtagagtt
     2941 tatcaagaag atagttttta tcattgacat aaggcaagat ttctatgatt gcacggcaga
     3001 tattcgggtt aatatcattt gctgctttta aaagtgtgtc gtggatttct tttgtctgaa
     3061 aaaacacaca aatatcagct tttttcataa actcattaat tttttgcgag catgcctctc
     3121 ttatcaatcc gtggtggttt gtctgatgga aaacaagcaa atcggcctct tgctgcgagt
     3181 tgattgtatc aagttttaaa atacaaatct gtttttccac atcaatgtcc gggcaatctg
     3241 ttgatggggt attgagcaca caaaaaatat cttctcttgt gtattgtttt tcacaaagag
     3301 cagcagcttt ttcaatctct tttaaaattt gaatatcttc tgtcatagtc accaatatac
     3361 cataagcggg ggttaaaaaa agagagtgca taaattaaat tgtgaatgag agaaagaaag
     3421 gaataaaaag tgagagaaat tgttgattta atgaaagagc tgctnnnnnn nnnnnnnnac
     3481 aatggtgggc ttgagcggtt tcaaaagaaa acccaaacca atgctgaaaa gaccaaaaaa
     3541 gaaagaaaac aaggaactaa aactatccga tttgatgaga agagcttaaa tatagcttac
     3601 aagagcaaat gtgcaaaaat ttttttttgt tataatataa ccctatgggt ataaagatag
     3661 acaannnnnn nnnnnnnttt cgtttttaac aaagcatttt tatgcttttg aaagcctgtt
     3721 ttataactgt aaaaacatta attttccaaa agaaaaacct gcaatttttg cactgtggca
     3781 cgcacatcaa tgtgctcttt atgcaaacga ggacaggggc aaccttaatg taatgatatc
     3841 aaaatctctt gatggagata ttatcgcagc tgcaacagaa catatgggga taaaagtagt
     3901 aagaggttct cacaaacgtt ccggagctgc agcctcactg gctttgatag aaaaacttga
     3961 gcagggagaa tgtgcagcaa taactatcga cggcccgaga ggtccctttg gcgttgtaaa
     4021 agacggggtt atcaatattg caaagctcac acaggttcct attataccaa tggtgtggta
     4081 ttcaccttca aaatggcttt taaaattcaa cacatgggat aatttccgtt ttcctttgct
     4141 tggtgtaaaa acaattgctg tttacggcga ccctatttat gttccttccg attgctcaaa
     4201 agaagaagcg gaatcataca ggctcaaagt tgaaaatgca ctcaaagatt tatacaaata
     4261 cgctcaggac aattttgatg agcttgtaaa aagttagttt tatatatctt aacaattttg
     4321 ttattattat taaacttttt ttaaaataaa ccgataacat taataagtaa tgtgtttttt
     4381 gtgtgtttag aaaatagagg gtgtattatg acatcaataa tgaaaaaaga gatatttgaa
     4441 gaaccgggtg ttgtgaaaaa tctcatacaa aactacgtca cacctaatga caaaatcaat
     4501 attgatttgc ctcaaaaagt tgacaatatt gtcattgtgg caagcggttc ttcatacaac
     4561 tgcgcggcaa tagcagcccc tttatttatt gagtacgcaa atatcccgtg cgaatgcgag
     4621 tattcaagcg agtttatttt acaaaaaaaa cattttatta ctcctgactc gctctacatt
     4681 tttgtatcac aatccggaga aacatccgac acattaaacg cattaaaaat gataaagcaa
     4741 gaaggcgtaa aaacaatgtg tatcacaaat gcaaaagatt ctgctatgtg gaagctatgt
     4801 gattacaaaa ttctctccga cgccggagaa gaaaaaagta ttgcatcaac aaaagcactg
     4861 accgcacaaa ttttatgctc aatgcttgta ctcttaaaac ttaaacataa aaacaacagt
     4921 gatatttcag gatacctcaa cactctaaga aggctgccgg catatcttga gcgtataaaa
     4981 agcgacgaag aaaaaataga agaaactgct aaaaccgtag ccacgtacaa caacatctct
     5041 attcttggca acaaaaacta ttatccgata gcaaaagaag gagctctgaa aatcaaagag
     5101 acttgttatt taaatgtaat ggcgtaccct tttggtgaat ttatgcacgg acatgttgct
     5161 gttttaaacc agaagtctat tgttattgcc attattgatg aagaaaatgc gcaatttgct
     5221 gtgagaaacc tgaaaaaaat caaagaagag tacaatcctc aaattgtctg cataacatct
     5281 gtacaggaag tacaagcagg agacataaat atttacatca aaacaaaaag aaaaatgaaa
     5341 gcaattttcg gttctctgat gacattgcag ttaatagcct gtaaaatggc agctattctt
     5401 gacaaaaacc cagattcacc caaaggatta aaaaaagttg tcaaagacta gctgagtctt
     5461 gagtattgaa cgagtctgga gacatcagcg cgccattcgt tttcccactt acctatcaaa
     5521 atatcagcag gagttttttt ctgcgctaaa agctcaagca aggggtctat aagatgctct
     5581 tcgttattgc catcaagttt taatgatgct gccgagattt ttgcaatttc atagacaata
     5641 tcagccacaa aatggtgttt gattttcata tcaattccgt attgaggagt tttgcgtctc
     5701 aggtattcat agtcaaaata ggtgagattg cacagcatat cttctactgc tgacattgcg
     5761 tcattgttat aaataagccc tttccacaat gcaggaaccg cacaaattaa aggtgagcgc
     5821 tggttgtcgt ggtttcttat ttcaatatag gttttcaatc ttacgtcagg aaaataaaga
     5881 ctaaggtggg tttcccagtc ctgttcctct gctctaaaac cttgccaccc gtgttttatg
     5941 aattctttaa aggttatgtt ttcaaccctt attgcagttt ttacgccgtt aatcgtacgt
     6001 tctataaaaa tcatgggcac atctaaaaga atcttggcat aatcctcaaa tccgaaatgt
     6061 gaattaaaaa ccttggcact aacaagcccg cagcggtcat tatccgtatc gagccagctg
     6121 gctgcacggt ttgatttgta ttttgtcagg cgtccgtttc ttaccggaga gtttgcaaaa
     6181 gcagcactga caataggcga gagcttaaga gcaaaagcaa attttctcat cgcgtccgct
     6241 tcatccttat aatcaaaact tgcctgaata cccgaagtct ctctcatcat aacaagtggc
     6301 tttttggcga ctgtgggtag gtattttgtc atatattcat atcttttttt ggggataata
     6361 tgaatatttt tgtaagttga aacaggttga ataccgtaac ctaaccagta tatgccaaat
     6421 tgctcggcaa tttgtgatgt ttttttgtta taaacatcaa taaacctttt gaccgaatta
     6481 aggtcagacg acggattcaa gctcaactct gtctgcgagc ccggctcgag cgtaacggtg
     6541 ccgtcattat ttgaaagtcc cagtatagcg ccgttttcat aaataccgtc tttctcttct
     6601 ttatatgcaa gcaaaaactt tgcaacatct tgataagggg catacttaaa agtatctttt
     6661 tttacaggga gtttttcaaa ctctacaccg gtacgttttt gagacagcac acactcatct
     6721 tttgcaccgt tgtaaaagat atttgtaagt tgagactcat cggttataag attttcttgt
     6781 gtattaattt ttgcatttag catacagttg cagggatttt tccttgtttt agttcaataa
     6841 gatttataag tttttccatc aaaacatcct gaaaacgctc attgttgtga gagttaattt
     6901 cacggataaa gtagcagggg cttgttacat ttatttccat tattttgccg tctgcaacgt
     6961 ccaaccctac catataaagc tctacagcgt tgagatgttt tgcaactttt tgagccattt
     7021 ctttttcttc ggccgtgaga tgtgttgttt caaaatattt atcagaatgt tcgctaaatt
     7081 taaaatcatc cttgccggga agcttgcgaa tacactcttc aaaaacgtgt tcccccacaa
     7141 taagaatacg tttatctccg tgcacagcgc cttccagata tctttgcacc attaccatgg
     7201 ttttgccgtt attagtaaga tttttgatta tggtgttgat atttctttct tctgtatcaa
     7261 ggtagtagac tccgcctcca aaacactggt ttagcggttt tataatagcc tttttatgtt
     7321 ctctgacaaa agcttttatt tcttctgccg aggctgtaac aatattttcc ggcgcaaatt
     7381 cagggaagta gttaaggtgg aatttttcat tgaaattttt aaccgcaata gggttgttaa
     7441 taacaaccgt tctttctgta tccacgtagt caaaaacact gcaagcattg atataatcaa
     7501 tatcaacagg cggatcggga cggaaaaaga ccacatcaaa gtgttctatt acatattttt
     7561 taggttcatc ttttttataa aaaatatcgc cgtctttttc gtatgcttgc cagcagagag
     7621 tttttgcaac attgccctct gtnnnnnnnn nnnnnnnnnn nnnnnnnnna cggtctaaaa
     7681 attcctttat aatccaaaaa ttagtgacta aatcattaaa ctcaaaatat ttaagctcaa
     7741 ggtcatctat gacgaataaa attgtttgct gtagtgatgt catatttcct ccatctaaac
     7801 tatagcaatt aaagtaaaaa ttacaatgat atgatatgat taaccggtaa ggcgagttta
     7861 caatttttaa gaaaaggaga aagaataatg aaaattttac acgcgatgat aagggtaaaa
     7921 gatatatata aatctatgaa attttataca gagcttctag gcctgaaaaa aacacacgaa
     7981 attaagctgg atgattccat tctgcacttt ttaaaaggtg aagactcaga ctttgaaata
     8041 gaattgactc aaaactttga aaaccctgct gacggctaca caaacggcag tgccttcggc
     8101 catnnnnnnn nnnnnnnnnn nnnnnnnnnc aaagcctttg gcggagagta tttatacgaa
     8161 ccttatgtta tggaagcagc acaatcaaaa atagctttca tcaaagaccc tgacggaaat
     8221 gagattgaaa ttatccaaaa gttataaaaa taaaaaaaca ggcagagaat agtctcttgc
     8281 ctgttttttt atttgtttga ttttctttta tcaaataaat tactgcctgt aaaaatatac
     8341 atcaagttat caattgcaaa aataggagag agtacggctg ctgttttaaa aagtattttt
     8401 tcacttttat ttaaattttt atttttcagc agcacaagca acgataaaat agttaatgca
     8461 ctaaatgcta atgctgatac tcctggaaaa gtatcaaact catgccattt tgaatgcagt
     8521 tttccctgag ctctagattt tattgtgtct tgttttagac gatgcactaa attttcattt
     8581 tgctcccaat ttggaaatcg ttttataaaa tccaaagcaa agtgtttttc caatttatcc
     8641 tgagcagatt caggattttt aataagccaa tatgtagagt cattttcttt tttggaagaa
     8701 aatgaaagat gtgtatttac tgtattaaat gcatttattc tcattatagg cctcttattt
     8761 ttttattata tcagcaaata cgaggcttct ataaaaataa aaaggaccgg acaagctgcc
     8821 ggtctttttt agatttggaa atcgtccaaa tctcctccca aaaattttgt tttcttcaat
     8881 ttctcaacaa ttaatgaatt tcaatatatt tattaaacca tcgagaaggt tatttgtgaa
     8941 gcattttagg gcatgtataa acgtaacagt ttttttacaa tcatgataac ccgcttctca
     9001 tcatggtttt catgattttt gcccgtgtaa cattttttaa tatttattat tttacaattt
     9061 tatatatttt aaattcagca ggcttgagtt ctccaaagtg taactctgac tcgggttttt
     9121 cgaatttcac ttcttcaaac tccgattcgc ctattttgcc ggattcttta taaatatatt
     9181 ctgaaacaat catgtagtcg catggcattt gaacctgttt gttatagaca gtttcgcccg
     9241 gttttatgta agaatttgaa tatccgtctt catgagtttc tgtaactttt tctgtcggag
     9301 agttatagtt tgcaacaatg agcaaagact cttttaacgg gtcttttgaa accatccagc
     9361 tcacaaaacc atcgtcatcc tgtgtaatga tttcagcttc gccttcacgc gtaagctcgt
     9421 tttgcagggc aaatttattg actgcattga atttgttaaa gaatttataa tccttttctc
     9481 ttggcataga tacttctgca cctatgacgc tttccatacc tgtcttagta aaagactcat
     9541 ccccgtcaat aaacataacc ggacgctgag catttttgcc tccggggagg aatttgtatt
     9601 taaaccattt aaataaagca cctctctcgc cgagttgacc gggatactga tcaattgcac
     9661 ggaactcacc gtcttgattg ttgtagcttt ttaaaatgga cagattgccg aatttggagt
     9721 cagaatccgc tatattaaac ctttccagct cctgattgtc ttctacaata gcctgtggag
     9781 ttttagagaa ttgagaaata atatcattac cccacaaaac atcaaaagcc atatcatcat
     9841 gatactcttt gtagtatctg tcccacagca tatattctgc cagtgttgca aagtgggcaa
     9901 catcagcttt cagctctttg tttgcacggc ccagcacttc tctgggtgca cggtagctta
     9961 ttggtacacc gtctttttct gacacttcgt ctacaatgtg gtcaatatgg tcaaccctaa
    10021 aaccgtcaaa gttatagtct ttttgcagtt ttttaagata gttgatataa acatcaatta
    10081 caggtttgtt atactcacct gtttcaagga aaacaaagta ataaggcgtc tggcagtcaa
    10141 ggtttgcaaa gtgggtcaca tcctcgcatt taaaatcaaa atgcctgaac attggataat
    10201 cacctgtgtc tgacattctg tcaaaaaccg gtgttccgca agagcaccac gccccgcccg
    10261 gagcaggcca taggccttct tgtatcaaaa gctgaatagt ttcgccctgt ttttttatat
    10321 cgtcttcttc aatgtttttg ttctgtttaa agtcattaac ccctgcaata agctcttttg
    10381 cacggttgtg tatttttatc tggttttctt ttttcatcat ttcatctgag aattcttttt
    10441 tctttggaga aataagctcc tcaaatttgt cgtagataac ctgatagtgt tccgaaaggt
    10501 catttgagcc ttttttgagt gttgctttat aaatatctct tactatttca acatcctcgg
    10561 gttcaaactc tgttttcagc ttttcatatg cagaatctgc ctctttttct attttttcaa
    10621 taagctcttt tatgtcatac cagcgtgcaa tagaggggtt agcaagcacc attttggaaa
    10681 atcttcctgt ttgaggaagc acatcataaa taacacagtg gcctgccagc tgtgcaagtt
    10741 ttacaaacag ctgcacctgt tgttttgtat caagaccaag tttttcagtt attcttttat
    10801 cttcaatatg cgggcttact tctgtactta cgggaaggta agcacagccg aattctctgg
    10861 ggtgaaacgg tataagataa accgttgtgc caagcacacc tttgtccggc attcctgatg
    10921 gaagaataag aacctgacga agccagtcta tgagttttcc tgtctcttga gttttgttgc
    10981 cgtcgcccag acctgcaagg tttatgagtt ttacgttatg ctgctctttt ttgagccagt
    11041 cgccgttttt gtaatcagcc ctttgtgccg gagaaatttt atcattatca aatttgaatt
    11101 ctcctttttc ttcatcaaaa acgctgttgt gtttccattt tatttccagc ccgtagagaa
    11161 tctctgcgtg cgagagctct tcaattgctt ttatgtaagg aaaaggaagg tatccgtttt
    11221 cttcaatgag gtttttaaga tattctttcc gttcatccga aattgaatca tagctgtaca
    11281 aatcttttaa ttttttataa gccgtgttaa tctcttt
//
LOCUS       DABS01000030           12445 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_14593, whole genome shotgun sequence.
ACCESSION   DABS01000030 DABS01000000
VERSION     DABS01000030.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 12445)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 12445)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12445
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            161..2625
                     /locus_tag="CPT85_01075"
                     /pseudo
     CDS             161..2625
                     /locus_tag="CPT85_01075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017712666.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpC"
     assembly_gap    777..783
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2766..2790
                     /estimated_length=25
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<2791..3271)
                     /locus_tag="CPT85_01080"
     CDS             complement(<2791..3271)
                     /locus_tag="CPT85_01080"
                     /inference="COORDINATES: protein motif:HMM:PF01596.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26745.1"
                     /translation="MDAVALKISDELELTQHKFWNISHQTAEFISMLIKISAPKNVLE
                     IGTSNGYSALWIADALKSAGKNGHLTTIEFYEKRQSIARENIEKCALXDFVTFKQGRA
                     LEILANLDFVPDMVFIDANKSEYIQYFDLLKDKLPKGGIILADNVVSHAAKVADFLEE
                     "
     assembly_gap    2998..2999
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3273..4529)
                     /locus_tag="CPT85_01085"
     CDS             complement(3273..4529)
                     /locus_tag="CPT85_01085"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26746.1"
                     /translation="MPSNPKRNPSGKVVSTYPANKKLSQLPDVVLFDSNFALLKVIKT
                     KDGKLTVTDTKNIPFIVKTGLFPQDMLVPPGLIIPEDMQIMMGDLKIALQNSSVNEIF
                     KGSAEIKQAKEDTKIIPVPYMAGKTLLVTTLDSKLINVIPTDSTVPKFTLKLDNLPKF
                     VQPVCDDKYILVAAAGKTYIDVADVAQEVLAKKIDLSFQPTEIILNKDKDKAFVAVGD
                     DQSVFLIDLKTMALQEKIKIKGYPKNIALSDDNKYLVYMDKNTGDIYTLALDGTYLNK
                     YVYNASNVSKIAMKGNCIYLLSRTENELQVIDTEIKDIIYKQPLAQKPVDMQLIDNKL
                     YILCASNELDVFRLDDYVLENQVRFPAQGFSKKLVHVPNTNILLITNVSDKRYFVYDY
                     EKNIILQTVKTSVFINDLQLLNKRLK"
     gene            complement(4513..4701)
                     /locus_tag="CPT85_01090"
     CDS             complement(4513..4701)
                     /locus_tag="CPT85_01090"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26747.1"
                     /translation="MKINIKTITAFLLVYFLTAMSSYATKLPAYILQTIKTDLPKADI
                     RFDGLVTLPXPSGFALKP"
     assembly_gap    4540..4541
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4851..5540)
                     /locus_tag="CPT85_01095"
     CDS             complement(4851..5540)
                     /locus_tag="CPT85_01095"
                     /inference="COORDINATES: protein motif:HMM:PF01556.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26748.1"
                     /translation="MGGFSGSSTVDPTAPQRGHDLRLDIELEFEEAAFGVEKEIKIDH
                     LEMCKDCYGTGAEPGTKPSICPECNGKGRVAHVTRTILGSIQQVTVCPKCGGTGQVIG
                     SPCKKCHGEGRLEVEKAIKVKIPAGVDNNAKIRVAKEGDAGKNGGSSGDLYIVMHVKP
                     HKEFKRDGFNVYSELYISLPQAVLGDNVMVNTIHGEKELVVPSGIEYGKILTXAYLFS
                     VILKKEATILY"
     assembly_gap    4904..4905
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5570..5824)
                     /locus_tag="CPT85_01100"
     CDS             complement(5570..5824)
                     /locus_tag="CPT85_01100"
                     /inference="COORDINATES: protein motif:HMM:PF00226.29"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26749.1"
                     /translation="MANYYEILGVSKEATQAEIKSAFRKKARELHPDVNKAPDAEEKF
                     KELGKAYETLSNEEKRSLYDRYGEEGLXTLPARLILDLAI"
     assembly_gap    5609..5610
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5833..6405)
                     /locus_tag="CPT85_01105"
     CDS             complement(5833..6405)
                     /locus_tag="CPT85_01105"
                     /inference="COORDINATES: protein motif:HMM:PRK14140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="DAB26750.1"
                     /translation="MGNENKENENIEELVCENNPFADSSNKETEEKTEEAKVCEDAIS
                     SLKDEIDKINNQYIRLAADFDNYRKRQMQERESLLKYGAEETLKKMIEALDNIDRAKK
                     SVENIDDVNTVKESYELVFKQIYDVLAKLGLEVIETKDKEFDPNWHEAVMQTPTAEYP
                     ENTIIAELQKGYKLGDKVLRPSLVNVAVSE"
     gene            complement(7080..7349)
                     /locus_tag="CPT85_01110"
     CDS             complement(7080..7349)
                     /locus_tag="CPT85_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013402841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding protein"
                     /protein_id="DAB26751.1"
                     /translation="MYQDEKLICEDCGAEFIFTAGEQEFYAEKGLVNKPKRCPECRKN
                     RRQNNRKKLYDVVCSKCGCETKVPFKPIMGKEVYCKDCFKSMQGN"
     gene            complement(7508..8053)
                     /locus_tag="CPT85_01115"
     CDS             complement(7508..8053)
                     /locus_tag="CPT85_01115"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26752.1"
                     /translation="MYAIFTMRKLQLTQRINNLQYRLMELSQRLQDLSVYAGNVADGV
                     ITPGEFMSSPASIFGANLNFFNNSVPKSLYEASRASQMYNANIMNLNAASGGQYGMAV
                     DPSNPNSIYANQYFIFNAFFKQALDAAGKAEAAKVKRLESDITAQKLMIETQLKAAET
                     ELQKVEDAESKNIERTAPKYA"
     gene            complement(8159..8770)
                     /gene="clpP"
                     /locus_tag="CPT85_01120"
     CDS             complement(8159..8770)
                     /gene="clpP"
                     /locus_tag="CPT85_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018703830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase, proteolytic
                     subunit ClpP"
                     /protein_id="DAB26753.1"
                     /translation="MSDFDYNRVLSYVPMVIESSSRGEKSFDIFSRLLRERIVFLGEE
                     IDDEMANVIVAQLLLLDSENPEKDIMLYINSPGGVITAGMAIYDTMQHIRADVSTICI
                     GEAASMGSFLLSSGAKGKRLSLPSSRIMIHQPLGGAQGQATDIEIEAKEILRMKNMLN
                     GILANNCSQPIEKIKEDTERDYYMSAQEAVEYGLIDKVITRVS"
     gene            complement(8836..9516)
                     /locus_tag="CPT85_01125"
     CDS             complement(8836..9516)
                     /locus_tag="CPT85_01125"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26754.1"
                     /translation="MDDIQRKKLRAVGALAVLVIAILTIFFLFLNAREKKNTALILRM
                     FYSDMSQTFQFSMNSNGAPGEWGWHGGYKNADLIDSYIAHYLRISEKCIKKTGTCMPD
                     VDYKTLNGKSANINLSKLPSVRLNNGIAFAVESIGSCKKTNSPCALVYVDINGVEEPN
                     TFGKDLFVFMIVNSNSVPFIPYNVHLSQDDIVHHTKYGCSKKSEIAMYCSALIHSKGW
                     VIDKNYPW"
     gene            9651..9983
                     /locus_tag="CPT85_01130"
     CDS             9651..9983
                     /locus_tag="CPT85_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017752406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="DAB26755.1"
                     /translation="MNIMQMMKQAQQMQKKLQDAQTELANTEFTAMAGNGAVTVVCDG
                     QGKFKKITLSKSALNPENPESVDSDSVEMLEDLISTAMKQATAQASSEMESKMKSLTG
                     GINIPGLF"
     gene            9983..10579
                     /locus_tag="CPT85_01135"
     CDS             9983..10579
                     /locus_tag="CPT85_01135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006039621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="DAB26756.1"
                     /translation="MQYTKPLANLIDYFQRLPGIGPKSAQRIAFYLLKMPLHDVEKFA
                     KAMITAKETIHYCDICFNMSATNPCEICSATNRDNSVICVCAETKDLIAIENTNEYKG
                     KYHVLQGLISPIDGIGAEDIRIKELLHRIANNDIKEVIIALNPSVEGEATSLYLTKLL
                     KPFNIKISRIAFGLPIGSDIEYADEITLAKAIECRREI"
     gene            complement(10591..>12202)
                     /locus_tag="CPT85_01140"
     CDS             complement(10591..>12202)
                     /locus_tag="CPT85_01140"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02465.16,HMM:PF07195.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26757.1"
                     /translation="KKQTTLNTLKSEYSAVQTATQKLTDSLYGAGSDIFSKVNVSASD
                     TSVVTATVTQYATPSSLDLEVFSLATATKKQSYEHDALRTSSNKLSELGVTTSGNFEI
                     NGATINVTPDMTIDSLIYQINNSSQANVKASLSKGHLVIESRDNGAKEIEITGTDLVD
                     GTHNFAELLGLQDTSTSRSTDKLDGLTSGSVTLADLGVTKDSAVFKINEAEITITSDM
                     TVDDFISAVSSSSAGVTAALDDGRLVFENKAGNTEPITFGGDNVTDTKSLSQLLGLDD
                     RMSFGSNAEYSIDGIRKTASSNILSSDDTGILGLSLELLTTTDGEPVTLDIERDYDSE
                     APLTALQEFVDAFNKLIKDTDTNTDGENGGILTGENNLVTIRNNLRSMITSPIDNPGV
                     YRSLADIGITTGAPGLDVSADTTQLVIDKDKFIEAFEKSPASVKALLVGDNTGGTTVT
                     GIMQEVQEKLKPALDAKGGYFTARSESLSSQISNLSDKIDKKQEYVYTYQERLTKQFN
                     YMDQMIAQMNAQFSQMQQQLASIGVEVG"
     assembly_gap    12203..12218
                     /estimated_length=16
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         4032 a         2298 c         2141 g         3918 t
ORIGIN      
        1 gtattgaaaa aggttacggc tattatccag caaaaaaact gctggaagca ataaatttaa
       61 gttgaaactt tgcccatgtg tgaggtaaaa taaagacaaa caggtttaac ccgttgaata
      121 atacaaaggg ttacctataa aatatggaca ggagttagta atgtttgaac gttttacaga
      181 aaaagcgata aaagtaatca tgctcgcaca agaagaagcg agaagattag gacataactt
      241 tgtcggcaca gagcaggttc tgcttggttt aatcggcgaa ggtacaggcg ttgcgtcaaa
      301 aacattaaaa tcaatgggaa ttacccttaa agacgcaaga gctgaggttg aaaaaattat
      361 cggtagaggt tctggttttg ttgcggtaga aatacctttt acgccaagag ccaaaagagt
      421 ccttgaattg tcatgggatg aagcaagaca gctagggcat aattacattg gcacagagca
      481 ccttttgctt ggacttataa gagaaggtga aggtgtagca gcaagagttc tcgaaaacct
      541 cggggtagac ttaaataaat taagaagcaa tattattaaa atgcttggcg aatcaaaacc
      601 tgcagcacaa acagctactg ccggtacagc ttccggcgga aaaacaaaaa caccgtcatt
      661 agatgaattc ggtacggatt tgacattagc agcacaagag caaagactcg accctgttgt
      721 tggtagagaa aaagaaattg aacgtgttat tcaaattctc gcaagaagaa ctaaaannnn
      781 nnngaaccgg gtgtaggtaa aacagctgtt gcagaaggtc ttgctatcag aatagttaac
      841 tcggacgttc cggatattct tgaaggcaag aaaattatcc agcttgatat ggggcttctt
      901 gttgcaggta caaaatacag aggtgagttt gaagaacgtc ttaaaaagat tatggacgaa
      961 atcagacagg caggaaatgt tatcctcgta attgatgaaa tgcacactct tataggtgca
     1021 ggtgctgcag aaggcgctat tgatgcggca aatattttga aacccgcatt atcaagaggc
     1081 gaaatacagg ttatcggtgc aacaacactt gatgaataca gaaaatatgt tgaaaaagac
     1141 gccgctcttg aaagaagatt ccaacctgtt ttaatcgatg aacccactat agatgagtct
     1201 attgaaatta tcagaggttt aaaatctaaa tacgaagaac accacagatt aaaaatatct
     1261 gatgaggcaa taattgcagc ggtttcattg tctgacaaat atattacaga cagattcctt
     1321 cctgacaagg ctatcgatat cattgatgaa gccagctcaa aggtccgtct gaatgtcagc
     1381 tctcttcctc cggaaggaaa agaaatcgaa aaagagctga aaagcatcat caaacaaaaa
     1441 gaagatgcta tcagaaatca agagtttgag catgcttcaa accttagaga taaagaagct
     1501 gatttaaaag aaaaaatcag agaaatgtct caacaatgga aagaagcaca tgatgctaac
     1561 aaacctgttg taacacctga acatgtagca gaagtagtca gcacaatgac gggtataccg
     1621 acaacaaaaa ttactgagaa agaatcagaa agactgttaa aacttgaaga aacactgcat
     1681 aacagagtaa ttggccaaga tcaggctgta gtttctctgt ctaaagcaat cagacgcgcc
     1741 agagttggcc tcaaggctcc taacagacct atcggaagct ttatctttgc aggtccgaca
     1801 ggtgttggta aaacagaact tgctaaagca ttggcagaag ctgtattcgg ttctgaagac
     1861 aacatgataa gagtcgatat gtcagaattt atggaaaaac actccacatc caagcttatc
     1921 ggttctccac cgggttatgt cggatatgat gatggcggac atcttactga aactatccgt
     1981 aagaaaccat attctgttat tctgtttgac gaaatagaaa aagcacaccc tgatgtattc
     2041 aacatcatgc ttcaaatcct tgacgacggt cgtttgacag acgccaaagg cagacacatc
     2101 aacttcaaaa acacaatcat tattatgaca tcaaacgttg gtgcaagtat gattacaaca
     2161 acatccaaat tgggcttctc tgtttctaac gacgagtcta aagataaata cgaacacctt
     2221 aaagacactg ttatggaaga aatgaaaaaa tctttcagac ctgaattcct taacagaata
     2281 gatgatatca ttgtattctc acaccttagc aaacctgaaa tcagagaaat cgttgaactt
     2341 atgtttaaag atttggttaa acgtattcaa tctcacgact tcactattga ggtttctgat
     2401 gaggttaagg attatctggc agatgaagga tactctgaag cctacggtgc cagaccgtta
     2461 agacgtgtaa ttcaaaagaa aattgaagat acacttgctg aagaaatact taacggaaaa
     2521 tacgtagcag gcgatgtaat ttctgccaaa ctcgaagata aaaagattgt ctttgaaaag
     2581 gttggagaat cagccaaaaa agaagaggcg gaatctgcta aatagttaaa caaagctaaa
     2641 tacaaaaaag aggcaaatca taatttgtct ctttttttta ttaactatta aaaaactatt
     2701 atattttaat tctctgtcaa ttttaaggcc atcagcagcc ccgctgggag gtctaaaact
     2761 tgagannnnn nnnnnnnnnn nnnnnnnnnn tttcttcaag gaaatcagca accttagcag
     2821 cgtgagagac aacattatct gccagaataa taccaccctt tggcaactta tcctttaaca
     2881 ggtcaaagta ctggatatat tcagacttat tggcatcaat aaataccata tccggaacaa
     2941 aatccaagtt agcaaggatt tccaaagccc tgccctgttt aaaggtgaca aaatcgcnna
     3001 gggcgcattt ttcaatattt tctcttgcta tagattgtct tttttcataa aactcgatag
     3061 ttgttaaatg tccgttttta cccgcacttt taagagcatc cgcaatccaa agtgcagaat
     3121 atccgtttga tgtaccaatc tcaagcacat ttttaggcgc tgatattttt atcagcatgc
     3181 ttataaattc ggctgtttga tgtgatatat tccaaaattt gtgttgagta agctccaact
     3241 cgtctgaaat ttttagcgca actgcatcca ttttatttta accttttatt caataattgt
     3301 agatcattta tgaatacgga tgttttcact gtttgcaaaa taatattttt ttcataatcg
     3361 tatacaaagt atcttttatc tgaaacattt gttataagaa gaatattggt gtttggcaca
     3421 tgcacaagtt ttttagaaaa gccttgagca gggaatctga cctgattttc caacacataa
     3481 tcatcgagcc tgaatacatc caattcattt gaagcacata aaatataaag tttattgtca
     3541 atgagctgca tatcgacagg tttttgtgcc agcggctgtt tgtaaattat atccttaatt
     3601 tctgtgtcta taacctgcaa ttcattttca gtccttgata aaaggtaaat acagttccct
     3661 ttcattgcaa tttttgaaac attagatgca ttatacacat acttgtttaa atatgtaccg
     3721 tcaagcgcga gggtgtatat gtcaccggta tttttgtcca tataaacaag gtatttattg
     3781 tcgtcactga gtgcaatatt tttaggataa cctttaatct taattttttc ttgcaaggcc
     3841 attgttttta aatctataag aaaaacagat tgatcatcac caacagcaac aaaagcctta
     3901 tccttgtctt tgttcaggat aatttcagta ggttgaaaag ataaatcaat tttttttgcc
     3961 agtacctcct gtgcaacatc agcaacatca atataggttt tgcctgctgc tgcaacaaga
     4021 atgtatttat catcgcatac aggctgcaca aactttggca gattatcaag cttcaacgtg
     4081 aattttggta ctgtagaatc agtgggaatt acgttaataa gcttggaatc gagagttgtg
     4141 acaagaagtg ttttgcctgc catataagga acaggaataa tttttgtatc ttcttttgct
     4201 tgtttgattt ctgcagaacc tttgaaaatc tcgtttacag aagaattttg aagtgcaatt
     4261 tttaaatcac ccatcataat ctgcatatct tcaggtatta ttagcccggg aggaacaagc
     4321 atatcctgtg ggaataaacc tgtttttact atgaacggaa tattttttgt atcagtaaca
     4381 gttaatttgc cgtcttttgt tttgatgact ttcaaaagtg caaagtttga atcaaacagc
     4441 acaacatctg gcagttgaga aagcttttta ttagccggat aagtgcttac taccttgcct
     4501 gagggatttc ttttagggtt tgagggcaaa accggaaggn ncaggaagtg tcaccaaacc
     4561 atcaaatcgg atatcggctt ttggcaaatc tgttttaata gtttgcaata tataagcggg
     4621 aagttttgtt gcatatgaag acattgcagt taaaaaatat actaataaga atgctgttat
     4681 agtttttata tttatcttca tcatatcttc ccgttgttgt tagctgtgaa ttgcgctttt
     4741 aaatttgtct atcagttttt cattaggttt tttattttca gataattcaa aaagcttttt
     4801 gtaaaggcgt ctttcctctt catttagtga ttttggagct ttgtacttaa tcaatacaag
     4861 atggtcgcct cttttttcag gatgaccgag aaaaggtatg cctnngttaa tattttacca
     4921 tactctatac ctgatggaac aaccagttct ttttcaccat ggatagtatt aaccattaca
     4981 ttatcaccaa gcaccgcttg aggaaggctg atataaagtt cggaatagac attaaacccg
     5041 tcacgtttaa attctttgtg aggttttaca tgcattacta tgtacaaatc tccgcttgaa
     5101 ccgccgtttt tgccggcatc accttctttt gcaacgcgta tttttgcatt attgtccaca
     5161 cctgcaggta tttttacctt gatagctttt tctacttcta atctgccttc tccatggcat
     5221 tttttacaag gagaaccgat tacctgacct gttccgccgc attttggaca aacagtaacc
     5281 tgctgtatac tgccaagaat agtgcgcgta acatgggcaa ctcttccttt accattacac
     5341 tcaggacata ttgaaggctt agtacctggt tctgctccag taccatagca gtctttacac
     5401 atttcaagat ggtctatttt aatttctttt tcaacaccaa aagctgcttc ctcaaactct
     5461 aattctatat caagtcttag gtcatgccct ctttgcggag cagtagggtc aactgtggaa
     5521 gaaccagaaa aaccacccat accgccaaag aaagactcaa atatgtcgtt tatattgcca
     5581 aatccaaaat caaacgggcc ggtagagtnn agagaccttc ttctccgtaa cgatcgtaca
     5641 aagaacgctt ctcttcattt gagagagtct catatgcttt gcccagttct ttaaattttt
     5701 cttcggcatc cggagctttg tttacatccg gatgcaattc tcttgctttt tttctgaatg
     5761 cactttttat ttcggcttgt gtagcttctt tgcttacacc cagtatctca taataatttg
     5821 ccataatccc cactattcac taactgcaac attaacaagc gacggtctta aaactttatc
     5881 accgagttta taaccttttt gcaattcagc aattatagta ttttccggat attctgctgt
     5941 cggagtctgc ataactgcct catgccagtt ggggtcgaat tccttgtctt ttgtctcaat
     6001 tacttccaat cccagtttgg ccaatacgtc ataaatctgt ttgaaaacaa gttcataact
     6061 ttcttttaca gtattaacat catcgatatt ttcaactgat tttttagcac ggtcaatatt
     6121 atcaagagcc tcaatcattt tcttcaacgt ttcttctgca ccgtatttta acaatgattc
     6181 gcgttcttgc atttgtcttt ttctataatt atcaaaatca gcagccagac gaatatattg
     6241 attatttatt ttatcaattt cgtcttttaa agaagatata gcatcttcac agacttttgc
     6301 ttcttctgtt ttttcttcag tttctttatt tgatgaatca gcaaatggat tattttcgca
     6361 aactaattct tcaatatttt cgttttcttt attttcattc cccataataa agccctttat
     6421 aagtttacaa tactataatt ataagttatc aagccattta ctcaaggaaa tttaattatt
     6481 tcttaacttt tcataagtta atgacgcaat ggagccattt ttagtttcaa ttgtaaagaa
     6541 atgtaatgaa aaacataaaa tttgaatttg aagatttcaa attgttttta tataagtacg
     6601 aggtatataa aaaatatcta agaagtaaat aattgaagaa ggagtaaatc tatgaacgta
     6661 tcagcaatcg gaaatttatt tggagtacaa caaggacctg aaaaaattga tcgcaaaccg
     6721 gcagcagaaa cagctggctc tttagcattc ggcacagcag aaacagctgg ttctcttgca
     6781 aacaacgcag gtggctcatt ctgcgcaatg gcttaggcaa agttttcaac atagagaatc
     6841 gactactata caatcggggt ggaaatgaac gaaataagaa tagctaacta tacattaatg
     6901 acaattttgt tattagttat gtcaacattc tatacatcaa taaacgcaat ggcacaatca
     6961 aacatgatag aaaacacaaa aaaaccgatg acaactggat ttatccggta aaagcaaaag
     7021 taataaagag aaaaaaagaa gcaccatagt ggtgcttctt tttttaatac ttaaaattat
     7081 taattgcctt gcatagattt aaaacaatct ttgcagtaga cttcttttcc cataataggt
     7141 ttaaaaggga ctttagtctc gcaaccgcat tttgaacaaa caacatcata aagttttttt
     7201 ctgttatttt gtcttctgtt ttttctacac tcgggacaac gttttggttt atttaccaat
     7261 cctttttccg cgtaaaattc ctgctcacct gcagtaaaaa taaattctgc accgcaatct
     7321 tcacagatga gtttttcgtc ttgatacatt ttgcctgtct ccttgtttta attggtaaat
     7381 aaatacctgc cttattagat ttatacattt tataactttt tttacaatta atcaataaaa
     7441 aaccctcttt taaatagagg gtttttaaat tcatttcaca cacacgagga atattataat
     7501 ttatttatta tgcatattta ggagctgttc gttctatatt tttgctttca gcatcttcaa
     7561 ctttttgaag ttcggtttca gctgccttca attgcgtttc tatcatcagt ttttgtgcag
     7621 tgatatctga ttcaagtctt tttaccttcg ctgcttctgc cttgcctgct gcgtcaagtg
     7681 cctgcttgaa gaatgcatta aagataaagt attggttagc atagattgag ttagggttag
     7741 aaggatcaac ggccataccg tattgaccgc ctgaggctgc attaagattc attatatttg
     7801 cattgtacat ttgagatgca cgtgatgctt cgtataatga tttcggaaca ctattgttaa
     7861 agaagttcaa attagctccg aaaatgctag ccggagagct cataaactca ccgggagtaa
     7921 taaccccatc agcgacatta cctgcataaa cagagagatc ttgtagtctt tgcgacaact
     7981 ccatcaatct gtattgaagg ttgttgatac gctgagtcaa ttgtagcttt cgcattgtaa
     8041 atattgcgta cactgtttaa tctcctacca taaccaattt attttatcta accttacata
     8101 tatataaaaa cattttggaa attaaaattg cgtatctttt attaattatt aagaaatatt
     8161 acgaaactct tgtaattact ttatcaatta agccgtattc cacagcttcc tgtgctgaca
     8221 tatagtaatc tctttcagta tcttccttaa ttttttcaat gggttgtgag caattattag
     8281 ccagaatacc attaagcatg tttttcatgc gaagtatttc ttttgcttca atttctatat
     8341 cagtagcctg gccttgagct ccgcctaaag gttggtgaat cataattctg gagcttggaa
     8401 gagaaagacg tttgccttta gcacctgaag aaagcaagaa agagcccata ctagcagctt
     8461 cacctataca gattgtgctg acgtccgctc tgatatgctg cattgtgtca taaattgcca
     8521 taccggcagt aataacacca cctgggctgt ttatatagag catgatgtct ttttcagggt
     8581 tttctgaatc aagtaaaagc aactgagcaa ctattacatt cgccatttca tcatcaattt
     8641 cttctccgag aaatacgatt ctttctctta aaagacgtga aaaaatatca aaggattttt
     8701 cacctcttga agaagattca ataaccattg gaacatagct caaaactcta ttataatcaa
     8761 aatccgacat tatctctcct ttataaattt cttaataaat tatacgcaca caacagccaa
     8821 ttttcaacct caaggctacc atggataatt tttatcaatt acccagcctt tggagtgtat
     8881 tagagcactg caatacattg ctatttctga ctttttgctg cagccgtatt ttgtatggtg
     8941 gactatatca tcctgcgata aatgaacatt gtaaggaata aacggaacag agttagaatt
     9001 aacaatcata aagacaaaca aatctttacc aaaagtattt ggttcttcaa ctccatttat
     9061 atcaacatac accagcgcac aaggtgaatt tgtttttttg catgatccga tagactccac
     9121 tgcaaaagct ataccattat taagcctcac agatggtaat tttgaaagat tgatgttcgc
     9181 tgatttgccg tttaaagtct tataatcaac atcaggcatg caagtgcctg tttttttaat
     9241 gcatttttct gatattcgca aataatgtgc tatataagaa tcaatgagat ctgcattttt
     9301 gtaaccgcca tgccaacccc attctccggg tgcaccattt gaattcatcg aaaattggaa
     9361 agtttgtgac atatcagaat aaaacattct taaaattaaa gctgtatttt tcttttccct
     9421 ggcattaagg aaaagaaaga aaatcgttaa tattgcgatt acaagaaccg caagagctcc
     9481 aactgcacgt aatttttttc tttgtatatc atccataggt ttataatacc atattttcac
     9541 taattctaca catttgaaaa gaaatgaaaa ttcgtaaaat aaaattgcat aaaaaatatt
     9601 ctttatctat aattattgta aggataaatg aacaagggga tgagaataat atgaacataa
     9661 tgcaaatgat gaaacaagct caacaaatgc aaaaaaaatt acaagatgca caaactgaac
     9721 ttgcaaatac agaatttact gcaatggcag gtaacggagc tgtaactgtc gtttgtgacg
     9781 gtcagggaaa atttaagaaa attacacttt ctaaatctgc tttaaatcct gaaaatccgg
     9841 aatctgttga ttctgattca gtagaaatgt tagaggattt gatttctaca gcaatgaaac
     9901 aagccactgc tcaagcaagc tctgaaatgg aatcaaaaat gaaatcacta actggtggta
     9961 ttaacatacc cggattattt taatgcaata cactaaacca ctggcaaatt taattgacta
    10021 tttccaaaga ttaccgggaa taggaccaaa atcagcacaa agaatcgcat tttatttatt
    10081 aaaaatgcct cttcatgatg tagaaaaatt tgctaaagct atgataacag ctaaagaaac
    10141 catacattat tgcgacatat gttttaatat gtcagccaca aatccctgtg aaatttgcag
    10201 tgcaacaaac agagataatt ctgtaatttg tgtttgtgcg gaaacaaaag atttaatagc
    10261 tattgaaaac acaaatgaat acaaaggaaa atatcatgtt ttgcaaggcc tcatctcacc
    10321 aatagatgga ataggagcag aagacataag gattaaagag cttctccaca gaatagcaaa
    10381 taatgacata aaagaagtca ttatcgcgct taatccttct gtagaaggcg aagcaacaag
    10441 tttatatcta acgaaattat taaaaccgtt taatataaaa attagcagaa tagcttttgg
    10501 tcttccaatc ggctctgata ttgaatatgc agacgaaatt acacttgcaa aagcaattga
    10561 gtgcagaaga gaaatttaac aatttaattt ctaaccgact tcaacgccaa tagatgcaag
    10621 ctgctgctgc atttgagaga attgagcatt catttgagca atcatttggt ccatatagtt
    10681 aaactgtttt gtcaatcttt cctgatatgt ataaacatat tcttgttttt tatcaatttt
    10741 atcagaaagg tttgaaatct gagagctcaa cgattccgat ctggctgtaa aatatccgcc
    10801 tttggcatca agagcaggtt tcaatttttc ttgtacttcc tgcataatac cagtaacagt
    10861 agtaccgcct gtattgtcac ctaccagcag cgctttaaca gacgccggcg atttttcaaa
    10921 agcttcaata aatttatctt tatcaataac aagttgtgta gtatcagcac ttacatcgag
    10981 ccccggtgca cctgttgtaa tacctatatc agccagagaa cgatatacac ccggattatc
    11041 aatcggagat gtaatcattg atctcaagtt atttctgata gttacaaggt tgttttcacc
    11101 agttaatata ccgccgtttt ctccgtctgt atttgtatcc gtatctttaa ttagtttatt
    11161 aaaggcgtca acaaactcct gcaacgctgt taacggagcc tctgaatcat aatcacgttc
    11221 tatatccaaa gtaacaggct caccgtctgt tgttgtcaac aactcaagtg acaaacctaa
    11281 aataccagtg tcatcacttg aaagaatatt tgaagaagcg gtttttctga ttccgtcaat
    11341 agaatattct gcatttgaac caaatgacat acgatcatcc aaacctaaaa gctgagacaa
    11401 tgattttgta tcagtaacat tatccccacc aaaggtaata ggttcagtgt tacctgcttt
    11461 attttcaaat acaagtcttc cgtcgtcaag agcagccgta acacctgctg aagaagagct
    11521 tacagcagaa ataaaatcat ctactgtcat atcagaagta attgtaattt cagcttcgtt
    11581 aattttaaat acagcagaat ctttcgttac acccaaatct gccaacgtta cagagccgct
    11641 tgttaatcca tccagcttat ctgtacttct gcttgtagat gtgtcttgaa gacctaataa
    11701 ctctgcaaaa ttgtgtgtac cgtcaaccaa atcagttccg gtaatttcaa tttcttttgc
    11761 accattgtca cggctttcaa ttacaaggtg accttttgac aaagacgctt taacgtttgc
    11821 ctgagatgaa ttgtttattt gataaataag agagtcgatt gtcatatccg gagttacgtt
    11881 aatagtcgca ccgttaattt caaagtttcc acttgttgta accccaagtt cagatagttt
    11941 gtttgaagag gttctcaatg cgtcgtgttc atatgattgt tttttagttg cagtagcaag
    12001 actaaaaact tccaaatcca aagaagacgg tgttgcatat tgagtaacag tagctgttac
    12061 aacactggta tcagaagccg aaacattaac ttttgaaaat atatcagagc ctgcaccgta
    12121 caaagaatcg gtaagttttt gcgtagcagt ttgaacagca ctgtattcag acttaagtgt
    12181 gtttaaagta gtttgttttt ttnnnnnnnn nnnnnnnntc ctgctcaatc ttaacaagag
    12241 ctgttatcca ttcatcaatc ggtaaacccg aacctacacc tgaaaatgat attgacataa
    12301 tttttcacct caaacacatt ttaaaagatt atcggctttt agaaatcata catttagctt
    12361 atttaaataa taacacgttt tttcactgtt ttcaacccgg taaaccccac tatccacgag
    12421 caattctgct acacaatagg attaa
//
LOCUS       DABS01000031            7213 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_19767, whole genome shotgun sequence.
ACCESSION   DABS01000031 DABS01000000
VERSION     DABS01000031.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7213)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7213)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7213
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(131..709)
                     /gene="cobO"
                     /locus_tag="CPT85_01145"
     CDS             complement(131..709)
                     /gene="cobO"
                     /locus_tag="CPT85_01145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018085045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="DAB26743.1"
                     /translation="MNEIRISIYRTEDTTLLEHGYIQIYTGDGKGKTTASLGLALRAL
                     GHGWKVLVIQFTKGDSGTTYGEIASAGKFLKNLEVHQFGMDRVVYKHNVCMEDYKEAK
                     KGWELAKQAIQSGEYQLVILDELNICVAMNMIKVSEVKDVLLNKPESLEIVLTGRYAH
                     PELVALAHLVTEMKPIKHYFDMGVMARQGIEY"
     gene            complement(1156..1824)
                     /locus_tag="CPT85_01150"
     CDS             complement(1156..1824)
                     /locus_tag="CPT85_01150"
                     /inference="COORDINATES: protein motif:HMM:PF00132.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26736.1"
                     /translation="MLNGLXXGLKAQSYILENNEESYGINSKKNLAQATKILKDRVND
                     KLLADGVTIIDPDTTYISPETEIAADTIIYPCTYIEGKNKIGKDCKIGPFARLRGDVE
                     LGEGVKIGNFVEIKKTKIKDHTNVCHLSYIGDSSLGSNVNIGAGTITANYNHITKEKF
                     NTVIDDNASTGSNSVIVAPAHIGENAAVGAGSVISKDIEANALGLTRAPLKILKGWFD
                     RIKK"
     gene            complement(1775..2455)
                     /locus_tag="CPT85_01155"
     CDS             complement(1775..2455)
                     /locus_tag="CPT85_01155"
                     /inference="COORDINATES: protein motif:HMM:PF00483.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26737.1"
                     /translation="MTNTINSQIKSIILAAGKGTRMKSETPKVLHKIFNKELLGYVID
                     AVNGTGMAKENYVIVGHCADEVENYVTKNYDNAKCRLQSPQLGTGHAAFQAYEDLKGF
                     EGQVLILCGDTPLLTAETLNKFISAHTQSQSALTVMSAIFEDPTNYGRIVRDENGNLK
                     AIVEEKDASDAQKKIKEINTGVYLLDWPKVHEAFLNLDSNNAQNEYYLTDIVKWTIXG
                     FEGAVLYS"
     assembly_gap    1806..1807
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2516..2517
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2687..4411
                     /locus_tag="CPT85_01160"
     CDS             2687..4411
                     /locus_tag="CPT85_01160"
                     /inference="COORDINATES: protein motif:HMM:PF03065.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein"
                     /protein_id="DAB26738.1"
                     /translation="MTVGQFVFMLHSHLPYYRKAGMWPFGEENLYECMAETYVPLLNA
                     ISELYDDEGIKAKLTVGITPILAEQLNDEHLQNGFIEYLDARITAISKDLERYPDPEV
                     AHSQHLKYLAKYYFDWFNHIKDSFINKYNKDLISAFKKYQDLGCIEITTSGATHGFSP
                     LLATDSNLNAQFKIGSDTTKRLFGKKAKGCWLPECAYRQGYEYIGKDGQKKWRPAIEV
                     TLQNNDIEYFFTESHVIEGGNSIGNRRVIGVYGNIEYIPLPEREPTGYDTYSAYWLPD
                     AQVAVMGRNDRAGFQVWSAADGYPGDGCYREFHKKDDKSGGHYWRITSSTTDLGDKML
                     YDPVLAMSQVNLNSDHYTTLIYHLLNDYKLSHDGKEGLVMVSFDTELFGHWWFEGVEF
                     IKQVIRKFNNYLPQVERMTAGEYLKAHPPTEAIQIPESSWGQGGHFYVWQNHLTEWMW
                     PIIHGCEKRIIDIASKYEKIPEDKLLHRALNQLARENLLLQSSDWPFLITTWQAKDYA
                     TDRFREHVERFETIADMIESGNIDENALSEIESIDNCFPVIDYRAYLPIEEGKIPQQE
                     EKLKPLYQ"
     assembly_gap    4462..4463
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4467..5093)
                     /locus_tag="CPT85_01165"
     CDS             complement(4467..5093)
                     /locus_tag="CPT85_01165"
                     /inference="COORDINATES: protein motif:HMM:PF00881.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="DAB26739.1"
                     /translation="MKNFKRLMVSLCVLAGIIGAANGAFAKVVLDDIKLPEPVITGGM
                     PLMEALKNRHSSTKFTKQEIPIQTLSNLLWAANGINRPDGKKTTPSALNAQVITIYAS
                     LPDGLYKYNPQMHTLEAFSKEDIRPIVGTKAPLILLYTANLARQSKYLASVDCGFIGQ
                     NVYLYSAANNLNTIFLYGVNSSALNYKLDLNLGEEVLFAQVVGFAPEK"
     gene            complement(5095..5799)
                     /locus_tag="CPT85_01170"
     CDS             complement(5095..5799)
                     /locus_tag="CPT85_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007951782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="DAB26744.1"
                     /translation="MEEKRYKGVIFDFNGTLFWDSKMHLEAWREYSKTLRGNAFTDEE
                     MREYMFGRTNEDIVKYLIGRQPEKELVLKCQTEKEAVYRQMCADDKENFKLAKGAVEF
                     LNYLCENNIPHTIATMSEEVNVKFFIKEFGLEKWFDISKIVYDNGKIKGKPEPDIYEI
                     AAKNLGLEPQECIVVEDAVSGIESARRAGIGKIVAIESMETRELYSKLPAVNDIIADF
                     DEFNRDWLSKKRDKVS"
     gene            complement(5805..6317)
                     /locus_tag="CPT85_01175"
     CDS             complement(5805..6317)
                     /locus_tag="CPT85_01175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012282579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="DAB26740.1"
                     /translation="MENTIDTIYDRRSVRKYLDKPVNPDLVDEILRAGMFAPSGCNKQ
                     PWHFVVFDEKQLVLEIESMHPYASALATAPVCIMVCGDTQKEMAKGFYQVDCSAAIEN
                     MLLAARALGLDTCWMGVYPWEEVMEKFSKRFDLPSHVKPFALISLGYAQSRQERPKRY
                     DSSRIHYNKW"
     gene            complement(6417..6605)
                     /locus_tag="CPT85_01180"
     CDS             complement(6417..6605)
                     /locus_tag="CPT85_01180"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26741.1"
                     /translation="MLEEDITKDDLSKIQTTIVNLHSLSCLLYDYSEYNYPSTHMPEV
                     SFAAEIMKEKCREIMNLL"
     gene            6671..6898
                     /locus_tag="CPT85_01185"
     CDS             6671..6898
                     /locus_tag="CPT85_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015908802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="DAB26742.1"
                     /translation="MTNSTILIVQKXQKNIKKFREIKGLTQDKLSEATGISADYISEI
                     ERGKKNPSLKRLILIAEALEVDIRELFTPQD"
     assembly_gap    6705..6706
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         2147 a         1461 c         1290 g         2307 t
ORIGIN      
        1 aaataattgc cttttttgtt taattgagct taatatttct taataaacaa aggcaaaaaa
       61 aagggagctt ttttcaaacc tcccatattt ccccatttct ccgtatattt acgtacgatt
      121 tctcgatacg ttaatattcg ataccttgtc ttgccataac acccatatca aagtagtgtt
      181 taatcggctt catttctgtt accaggtgag ctaaagctac aagctcgggg tgagcatatc
      241 ttcctgttaa cacaatttcc aagctttcag gcttgtttaa taaaacgtct tttacctcgg
      301 aaactttaat catattcatt gctacgcaaa tgtttaattc atcgaggata accagctggt
      361 attcaccgct ttgaatagcc tgttttgcca attcccagcc ttttttagct tctttgtagt
      421 cttccatgca cacattgtgt ttgtaaacaa ctctgtccat accaaactgg tgcacttcaa
      481 gatttttcaa gaacttaccg gcagaagcaa tttcaccgta agttgtaccg gagtcacctt
      541 ttgtaaactg gataacaaga actttccagc catgacctaa agcacgcaaa gccaaaccta
      601 atgatgctgt tgttttacct tttccatcgc cagtgtaaat ttgaatataa ccgtgctcta
      661 acaaagttgt gtcctccgtt cgataaattg agattcttat ctcattcatc attataaata
      721 tttttttact gttctgcttc gattaaatgg agtagatact ctatctattt tgtttcggaa
      781 ttagggtaaa atttacactt attgcgcaaa aaacaaatta acacaatact tgtttgtccc
      841 ctaaaatttt tatatcaatt attatttgat taacatccga actcgccgaa cttgtataac
      901 catattaaaa caaatttttc aaacttgggc aatttttgtt ttgtccatgc tttttatttt
      961 acaattttac tctcgtagca ggggccaaaa tactggctaa ttgccgattt caagtagtgt
     1021 caaaaaactt ttacatttaa ttttttatca attcttaaaa aagacttgaa accatggaaa
     1081 acattgtatt caatcttttt ttataaaaat aattgtggtt aaaattttgt aattattttt
     1141 tgttttttgc aaatcctact tttttattct gtcaaaccag ccctttaaaa tttttaaagg
     1201 tgctctggtg agcccaagcg cgtttgcttc aatatccttg ctgattacag aaccggcacc
     1261 aacagctgcg ttctcgccga tgtgagcggg cgctacgatt acggaatttg atcctgtaga
     1321 ggcattgtca tcaatcacgg tattgaattt ttcttttgtg atgtggttgt agtttgctgt
     1381 gattgtgcct gctcctatgt ttacgttgct gccaagagag ctgtcaccga tataacttaa
     1441 atggcagacg tttgtgtggt ctttgatttt tgtcttttta atttctacaa aattaccgat
     1501 tttaacccct tcaccaagct caacatctcc tctaagacgt gcaaacggac cgattttgca
     1561 gtcttttcct attttgtttt ttccttcaat ataagtgcat ggataaatta ttgtatccgc
     1621 tgcaatttcc gtctcgggag aaatataagt tgtgtcaggg tctataattg ttacaccgtc
     1681 agctaacaat ttgtcgttta ccctgtcttt caaaatcttt gttgcctgtg caagattctt
     1741 tttagagtta attccgtaag actcttcatt gttttcaaga atataagact gcgccttcaa
     1801 accctnnaat agtccattta acaatatctg tcaaatagta ctcattctgc gcgttgttgg
     1861 aatccagatt caaaaacgct tcatgcactt ttggccaatc gagcaaataa acacccgtgt
     1921 ttatttcttt aatctttttc tgcgcgtcag aagcatcttt ttcttcaaca atagctttta
     1981 aattgccgtt ttcgtccctg acaatacgac cgtagtttgt agggtcttca aaaattgcag
     2041 acataacagt caatgcagat tggctttgtg tgtgcgcact gataaattta ttaagggttt
     2101 ctgctgtaag taatggcgtg tcaccgcaaa gaatcagcac ctgcccttca aaacctttta
     2161 aatcttcata agcctgaaaa gctgcatggc ctgtgccaag ctggggagat tgcagcctgc
     2221 attttgcgtt gtcataattt tttgttacat aattttcaac ttcatcagcg cagtgtccta
     2281 cgataacata attttcttta gccataccgg tgccgttaac agcgtctatt acataaccaa
     2341 gcagttcttt gttaaaaatt ttgtgcagca cttttggtgt ttcagatttc attcttgtcc
     2401 ctttgcccgc tgccagtata attgacttaa tctgtgaatt tattgtattt gtcatattaa
     2461 tattccttta taaatatata tttctttaat tattctatat caaagcaaaa taatgnnttt
     2521 ttgtaaatat agctccatag aattaattct atggggttat attttatcga taattgtgat
     2581 ataactatgt ataatcaggg gaagattata taaaaacagt ctgaaccaat atttatataa
     2641 cgagatagat agcgtcaagg cgcaaattaa gagaaaagga gaatttatga cagtaggtca
     2701 attcgtattc atgttacact cccacctccc ctactacaga aaagccggaa tgtggccttt
     2761 cggggaagag aacctgtatg aatgcatggc agaaacatat gttcctttgt tgaatgcaat
     2821 ttccgagttg tacgatgatg aaggcataaa agcaaaatta acagtaggta tcactcctat
     2881 tttggctgaa cagttaaacg atgaacatct tcaaaacggt tttatcgaat acttagacgc
     2941 tcgtatcact gcaatttcaa aggatttaga aagatatccc gatcctgaag ttgcacactc
     3001 acagcattta aaatatcttg caaaatatta ctttgactgg ttcaaccaca tcaaagattc
     3061 ctttattaat aaatataata aagaccttat cagcgcattt aagaaatatc aggacttagg
     3121 ctgtattgaa atcacaacat caggtgcaac tcacggattt tcaccgctgc ttgctactga
     3181 ttcaaacctc aatgcgcaat tcaaaatcgg ttctgataca acaaaaagat tgttcggcaa
     3241 aaaagcaaaa ggctgctggc tgccagaatg tgcttacaga cagggctatg aatacatcgg
     3301 caaagacggc cagaaaaaat ggagaccggc tatcgaagtt actctgcaaa acaatgatat
     3361 cgagtacttc tttacagaat ctcacgtaat cgaaggcgga aactcaatcg gcaacagacg
     3421 tgtaatcggt gtttacggaa acattgaata cattcctctg cctgaaagag aacccacagg
     3481 atacgataca tattctgctt actggctgcc cgatgcacag gttgcagtaa tgggaagaaa
     3541 cgacagagca gggttccagg tttggtcagc tgctgacggc tatccgggag acggctgcta
     3601 cagagaattc cacaaaaaag atgacaaatc aggcggacac tactggagaa ttacatcttc
     3661 tacaacagac ctgggcgaca aaatgctcta tgaccctgtg ctggctatgt ctcaggttaa
     3721 cctgaactct gaccactata caacacttat ttaccacctg ttgaatgatt acaaactttc
     3781 acacgatggt aaagaaggtc ttgtaatggt ttcattcgac acagaacttt ttggccactg
     3841 gtggtttgaa ggtgttgaat ttattaaaca ggtcataaga aaattcaata actacctccc
     3901 gcaggtagaa agaatgacag caggcgaata cttaaaagct catccgccga cagaagctat
     3961 ccagattcct gaatcttctt ggggacaggg cggtcacttc tatgtatggc aaaaccatct
     4021 tacagaatgg atgtggccaa ttatccacgg ttgtgaaaaa cgtataattg acattgcttc
     4081 aaaatacgaa aaaattccgg aagataaact tctgcataga gcactcaatc agctggcaag
     4141 agaaaacctc ctgcttcaaa gctctgactg gccgttctta atcacaacat ggcaggcaaa
     4201 agactatgca acagacagat tcagagaaca cgttgaaaga tttgaaacaa tcgctgatat
     4261 gattgaatca ggcaatatcg atgaaaacgc attgtctgaa atcgaatcaa tcgataactg
     4321 cttccctgta atcgattaca gagcatatct tcctattgaa gaaggcaaaa tcccacagca
     4381 ggaagaaaaa ttgaaacctt tatatcaata atatctgttg ataaataaag caaaaaatac
     4441 ctccgataaa tttatcggag gnntatttat ttttcaggag caaatccaac aacctgtgca
     4501 aaaagaactt cttctccaag gtttaaatca agcttgtaat ttaaagcact gctgttgacc
     4561 ccgtataaga aaatagtgtt caaattgttt gctgcactgt aaagatatac attctgcccg
     4621 ataaaaccgc agtcaacaga agcaagatac ttgctctgtc ttgcaagatt tgctgtatac
     4681 aaaagaatca aaggtgcttt tgtgccaaca atcggtctta tgtcctcttt gctaaatgct
     4741 tctaaagtgt gcatttgcgg gttgtatttg tacaatccgt caggcaaaga cgcataaatc
     4801 gtgataacct gtgcattcaa agcactgggc gtggtttttt tcccgtcagg cctgtttatg
     4861 ccgttagcgg cccataaaag atttgacaag gtctgaatgg gaatctcctg ttttgtaaac
     4921 tttgtgctgg agtgcctgtt tttcaatgct tccatcaagg gcattcctcc ggtaataacg
     4981 ggctcgggca gttttatgtc atctaaaaca acttttgcaa atgctccgtt tgctgcacca
     5041 atgatgcctg ctaaaacaca taatgaaacc attaatcttt tgaaattttt catcctaact
     5101 taccttatct ctcttttttg ataaccaatc tctgttaaat tcgtcaaagt ctgcgataat
     5161 atcatttacc gcaggcagct tgctgtatag ctctcttgtt tccatagatt ctatagcaac
     5221 aattttgcct atgcccgcac gtcttgcaga ttcaatgcct gatacagcat cttccacaac
     5281 aatgcattcc tgtggctcaa gcccgagatt ttttgctgca atttcgtaaa tatcaggctc
     5341 gggtttgcct ttgatttttc cgttgtcgta aacaattttt gaaatatcaa accacttttc
     5401 aagcccaaat tcttttataa agaatttgac attaacttct tctgacattg ttgcaatcgt
     5461 gtgcgggatg ttgttttcgc acaggtagtt taaaaattct acagcacctt ttgcgagctt
     5521 aaagttttct ttgtcatcag cacacatttg acggtaaaca gcttcttttt ctgtctggca
     5581 ttttaacaca agctcttttt caggctgtct tccgataaga tattttacaa tgtcctcgtt
     5641 ggtgcggcca aacatgtatt ctctcatttc ctcatctgta aaagcattgc ctctaagagt
     5701 ttttgagtac tctctccacg cctcaaggtg catctttgaa tcccagaaaa gcgtgccgtt
     5761 aaaatcaaat attacgcctt tgtatctttt ttcttccatt gttattacca tttgttgtag
     5821 tgtattctgc tagagtcata tcttttgggg cgttcttgtc tgctttgagc ataacccagc
     5881 gatatcaatg caaacggttt tacatgagac ggcaggtcaa accgttttga aaatttctcc
     5941 ataacctctt cccacggata cactcccatc cagcaggtat ccaagcccag tgccctggcc
     6001 gcaagcagca tgttttctat tgctgctgaa caatcaacct gataaaaacc ttttgccatt
     6061 tctttttgcg tatcaccgca taccataatg catacaggcg ctgtagcaag tgcagatgca
     6121 taagggtgca ttgattcaat ttcgagcacc agctgttttt cgtcaaaaac tacaaaatgc
     6181 catggctgtt tgttacaccc tgagggtgca aacattcccg ctcttaaaat ttcgtctaca
     6241 agatcagggt taacgggttt gtccagatat tttcttacac ttcttctgtc ataaatagta
     6301 tcaatcgtat tttccataca aatcactccg ctcaaccgtt tttttattga atttacagac
     6361 cgattatatc acacaatccc cctgttcgat attaccgact tgggggtttt tacaattcag
     6421 agcagattca taatctcgcg gcatttttct ttcattattt cagcagcaaa ggatacttcg
     6481 ggcatgtgtg ttgagggata attgtattca gaatagtcat acagcagaca actgagtgaa
     6541 tgaagattga cgatggtggt ttggattttt gataagtcat cttttgtgat atcttcttcg
     6601 agcatataga tttccctttc cgtgctattt gcctgtgtat taatttaaag tataacatta
     6661 aaattaaact atgacaaata gcacgatttt gattgtacaa aaatnncaaa aaaatataaa
     6721 aaaatttaga gaaataaaag gcttgactca agataaattg agtgaggcaa ccgggatatc
     6781 ggcagactat atttcagaga ttgaacgcgg taagaaaaac ccgagtttaa aaagattgat
     6841 attaatcgca gaggctctag aggtagatat aagagaactc ttcacccctc aagattaaaa
     6901 caaaccagcg aaggcgcagc cgagcctaat ataaaaacca agcagggcgc agcccgcgca
     6961 aaaacaacaa gaatctcttc aaaacagggg gttcgggggc agtatgcccc tgatggcgaa
     7021 gtctgtttat tagagatttt taagcaatga aatgaaaatt tacgcctcct tgtgaggtga
     7081 aattttcgtt tcagggcttt aaaagctctt ttgagccagc gttctttttc ttttctttgg
     7141 ttcgtttctt ttctttttaa tcgcaaaaaa agaaaagaaa tgaacagagc gttcgaaaga
     7201 atgcgataaa aaa
//
LOCUS       DABS01000032            4670 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_21657, whole genome shotgun sequence.
ACCESSION   DABS01000032 DABS01000000
VERSION     DABS01000032.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4670)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4670)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4670
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..1110
                     /locus_tag="CPT85_01190"
     CDS             <1..1110
                     /locus_tag="CPT85_01190"
                     /inference="COORDINATES: protein motif:HMM:PF11335.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26713.1"
                     /translation="PEASSVEGKRNKIITFFKVWGIIVTGCALLMAIACLNPKHIDFG
                     VFFTIFLPPVVILVLVPLFFVRSLYAISAKKKILPKLLSFWGQFNYVPPLNLYTALYD
                     CIKNKTGIGGLLNEIFQDKRSDISIDHNIMSRLLRYENVSFDDKITGRYEDINLELAE
                     FHTYYTTRDSKGNKSKHITFKGVCFSAVMNKSFKGMTAISTTSLDKRRLDRGNRLLIE
                     GDVDLGDLFDAGKKFLKSGFDKQKLIQKTQEFEAAQEAAESAPKCQDVMLEDPEFRDM
                     FSVYSNDQVEARYILTTAFMERFKKMEKSFNGGIKAIFIDNKIYILVDDRKNWFEIPF
                     FKSATDINNYKEFINDFTKLLAIIETLKLNENIGL"
     gene            1175..1510
                     /locus_tag="CPT85_01195"
                     /pseudo
     CDS             1175..1510
                     /locus_tag="CPT85_01195"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1426..1441
                     /estimated_length=16
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1548..2540
                     /locus_tag="CPT85_01200"
     CDS             1548..2540
                     /locus_tag="CPT85_01200"
                     /inference="COORDINATES: protein motif:HMM:PF01075.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26714.1"
                     /translation="MKKPKKILMVNFGGIGDEILFLPAISSLKKEFPDAEITLALEPR
                     SKSVKDLSNLINDVMCVDIKGKGAKHKYWELLKFAMKAREGKFDMVFSSGANQLIPLL
                     LFSTGIKQRYGYKSGILSSLLLTRAVELNKNQYASFMYHELVTPVTDKKTLYPEIDAG
                     DIEKEPGSVLIHPGVSKMSVVKNMVKTWSPEIWAELVKKVLAKGKKVYLIGGPDDKEC
                     IEKIVEIIGDTPNFENLYGTTKNIMDLARLTKRSETLICSDSAPMHIGVGVGTRTLAL
                     FGPTDEKKLIPDNEKFVAIKNNCDCRPCLWDKRQTTCDELKCLKIDLDEVANLV"
     gene            complement(2747..3160)
                     /locus_tag="CPT85_01205"
     CDS             complement(2747..3160)
                     /locus_tag="CPT85_01205"
                     /inference="COORDINATES: protein motif:HMM:PF07963.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26715.1"
                     /translation="MNKKSGFTLAEVLVTLMIIGVIAAMTIPSLMQSTAQQEFRAAYK
                     KATSMINQAVTLNYALDGRDATDYNGTAFFDLLTQRLNVMSSDQTNTELYTADGMWFK
                     TYAEQRGAMGAPNSDCNAXXQKATFVQLLKLTLTV"
     assembly_gap    2797..2798
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3340..>4670
                     /gene="gidA"
                     /locus_tag="CPT85_01210"
     CDS             3340..>4670
                     /gene="gidA"
                     /locus_tag="CPT85_01210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009631222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="DAB26716.1"
                     /translation="MFKFDLIIVGSGHAGCEAAISAAKLGLKTLLMTLNLDNIALMPC
                     NPAVGGPAKSCLVREIDALGGVMGIVTDATYIQMKTLNSSRGPAVRALRAQSDKKEYM
                     TFMRHLIESNQNISLKQAMATELIVENDTVKGVKDEFGLEYLAPAVVLTTGTSLEGKC
                     YVGLQYVNAGRMGERAATGLSASLLKNGLELKRLKTGTPARVDSRTIDYSKMTIQPGD
                     DELRFFSFEPNRPVRKQYPCYLTRTTEKTHEIIKNNLDKSPLYAGLIHGIGPRYCPSI
                     EDKVVRFAHNPSHHIFIEPEGKDTYEIYVQGFSTSLPAHVQVEMLKSLPGLENVHIIK
                     PAYAVEYDAVPALQLSHSLMTKKIKGLFCAGQINGTSGYEEAAAQGLVAGINAYNYLN
                     NKEMLELSRSNSYIGTLIDDLVTKDIQEPYRMLTSRSEYRLLLRQDNADERL"
BASE COUNT         1513 a          863 c          921 g         1355 t
ORIGIN      
        1 cccgaggctt cttctgttga gggcaaaagg aataaaatca ttacattttt taaagtatgg
       61 ggcattattg tcacaggttg tgcacttttg atggctatag cttgtttaaa ccccaaacac
      121 attgattttg gcgtattttt cactatattc ttgccgccgg tagttattct ggttcttgtg
      181 ccgttgtttt ttgtaagaag cctttatgca atcagtgcaa agaaaaagat tctgccaaaa
      241 ctgctctctt tctggggaca gtttaattat gtacctccac tcaaccttta tacagctctt
      301 tatgactgta ttaaaaacaa aacaggtatt ggcggtctgc tgaacgaaat atttcaggac
      361 aaaaggtcgg atatttctat tgaccacaac ataatgtctc gtcttttgcg ctacgaaaat
      421 gtttcctttg acgataaaat tacaggccgt tatgaggata ttaatctcga gctggcagag
      481 tttcatacct attacacaac aagagacagc aagggcaaca aaagcaaaca cataactttt
      541 aagggtgtat gttttagtgc tgttatgaac aaaagtttta aaggtatgac cgctatttca
      601 acaaccagcc tggacaaaag aagactcgat agaggcaata gattactgat agaaggcgat
      661 gttgatcttg gtgacttgtt tgatgcaggt aaaaagtttt tgaaatcagg ttttgacaaa
      721 caaaaactta tccaaaaaac acaggagttt gaagctgccc aggaagctgc tgaatctgcc
      781 cctaagtgtc aggatgtaat gcttgaagac cccgagttta gagatatgtt cagtgtctac
      841 tcaaatgacc aggtcgaagc cagatatatc ctgacaacag cgtttatgga aagatttaaa
      901 aagatggaaa agtctttcaa tggcgggata aaagcaattt ttatcgacaa caagatttat
      961 attcttgttg atgacagaaa aaactggttc gaaattccgt ttttcaaatc agcaactgat
     1021 ataaacaact acaaagagtt tatcaacgat tttacaaaac tgcttgctat catcgaaaca
     1081 ctcaaactta atgagaatat cggtctttaa taagtcgttg cagtaagttg aaaattataa
     1141 tataatttcg gtatacacaa ttttaggtga acaaatggca aaacataacg atacaattcc
     1201 tatagaagta tgtattttaa cagtagacca cgatataaaa gggactgtgc acgtttctaa
     1261 atataccaac acaaaccggg aattgactga ccttttaaat gataaggaaa gaagattcct
     1321 cgctgttacc aatgttgaaa tatacccgag aaactcaaac cagcctccaa gaagatacaa
     1381 cttcttagaa attcatatgg attacgtttt gatggttcat ccgtcnnnnn nnnnnnnnnn
     1441 naaagcacag gaagacattg caagattcag agagttaaga aataaattga gccagacaaa
     1501 accgttttag gcctatcggc ttaattttgt gaatttggta tgaaaaaatg aaaaagccga
     1561 aaaaaatatt aatggttaac tttggcggca ttggggatga aatcctgttt ttgcctgcta
     1621 tttccagctt aaaaaaggaa tttcctgacg ctgaaataac ccttgccctg gagccaagaa
     1681 gcaagtctgt aaaagatttg tctaacctta tcaatgacgt tatgtgcgtt gatataaaag
     1741 gtaaaggcgc taaacataaa tattgggagc tgttaaagtt cgccatgaag gcgcgtgagg
     1801 gcaaatttga tatggtgttt tcatcaggtg caaatcagct catcccgctt ttattgtttt
     1861 caacaggtat aaaacagcgc tacggctaca aaagcggaat attgagcagc ttgcttttga
     1921 ctcgcgcagt tgagctcaat aaaaatcaat acgcgtcttt tatgtaccat gagcttgtta
     1981 ctcctgttac ggataaaaaa acgctgtatc cggaaattga tgcaggcgat attgaaaaag
     2041 agcccggctc tgtgcttatt caccccggtg tgagcaagat gagcgttgtg aaaaatatgg
     2101 taaaaacctg gtctccggaa atctgggcag agcttgtaaa aaaagtcctt gcaaaaggta
     2161 aaaaagttta tttaataggc ggccccgatg acaaagaatg tattgaaaaa attgttgaaa
     2221 taatcggtga tacgcctaac tttgaaaatc tttacggcac aacaaagaat ataatggacc
     2281 ttgcgcgtct tacaaaacgc tctgaaacgc ttatctgttc agactcggct cctatgcaca
     2341 ttggtgttgg cgttggtaca agaacccttg ctcttttcgg cccgacagat gaaaaaaaac
     2401 ttatccctga taacgaaaaa tttgttgcaa taaaaaacaa ctgcgactgc cgtccgtgcc
     2461 tttgggacaa acgtcaaaca acatgtgacg agctaaagtg tctcaaaatc gatttggacg
     2521 aagttgctaa tcttgtttag tttttaatta ataaaaaaat ttaattaata aaaaaaagaa
     2581 cctcacattt gtgaggttct tttttagttt aagtttcaat caaactattt ttggtataaa
     2641 accataccca ttgtttcgtt agcaggtaat gctttttgag ggtaaatagc gattgtgaaa
     2701 aggtcaaaga ttcttgttgt agaagtagtg tatctgttag gacctttcat accgttaacg
     2761 tcaacttcaa caactgaaca aatgttgcct tctgttnntt agcgttacaa tctgaattag
     2821 gtgcacccat tgcgcctctt tgttctgcat aagttttgaa ccacataccg tcagcagtat
     2881 aaagttcagt gttagtttgg tcagaagaca taacgtttaa tctttgtgtt aacagatcaa
     2941 agaatgctgt accgttatag tcagtagcat ctctaccgtc taacgcgtag ttcaaagtaa
     3001 ctgcctggtt gatcatagaa gttgcttttt tgtaagcagc tctaaattct tgttgagcgg
     3061 tagattgcat caatgaagga attgtcatag ctgcgattac accgataatc atcaatgtaa
     3121 ctaaaacttc cgctaaagta aaacctgatt ttttgttcat aagatcctct ttctttctta
     3181 tttaaaaagc cttatttcat ttaacactaa tttgtattat acctattaac tatatatcat
     3241 tcattataaa aatgcaatac attaacaagg ttaattacta tatgcccaca accataggtt
     3301 gttaaacatg ttttaaattt tttggtttat aatttacata tgtttaaatt tgacttaatt
     3361 atagttggtt ccggccatgc cggatgtgaa gccgccataa gcgctgcaaa actggggctt
     3421 aagacccttt tgatgacact aaatctggat aatattgcgc tgatgccatg caaccctgct
     3481 gttggtgggc cagcaaagtc atgccttgta agagaaattg acgcattagg cggggtaatg
     3541 ggtatagtaa cagatgccac atatatccag atgaaaacac taaattcctc cagaggtccg
     3601 gcagtacgtg cgctaagagc gcagtcggac aaaaaagaat acatgacttt catgagacat
     3661 ttgattgaaa gtaatcaaaa tatttcccta aaacaggcaa tggcaacaga gcttattgtt
     3721 gaaaacgata cagtaaaagg tgttaaagac gaatttggcc tagagtattt ggctcctgct
     3781 gttgttttga caacaggcac atcgttagag ggtaaatgct acgtaggtct tcaatatgtc
     3841 aatgccggta gaatgggcga acgcgctgca acaggcctct ctgcttctct tcttaaaaat
     3901 ggacttgaat tgaagcgtct taaaacaggc acccctgcaa gagtggattc tcgcacaatt
     3961 gattattcaa aaatgacgat acagcccgga gatgatgagc taagattttt ctcatttgaa
     4021 ccaaatcgtc ccgtaagaaa acaatacccg tgctatctca caagaacaac tgaaaaaacg
     4081 catgagataa taaaaaataa ccttgataaa tctccattgt atgccggact catccacgga
     4141 ataggcccga ggtattgtcc ttctattgag gataaggtgg tgagatttgc tcataacccg
     4201 tcacaccata tttttataga acccgaaggc aaagatactt acgaaatcta tgtacagggc
     4261 ttttcaacaa gtctgcccgc acatgttcag gtagaaatgc tcaaatctct tcccggcctt
     4321 gaaaatgttc atatcatcaa acctgcttat gcagtagaat acgacgctgt gcctgcgtta
     4381 cagctttcgc attctttgat gacaaaaaaa atcaaaggac ttttctgcgc aggccagatt
     4441 aacggtacaa gcggttacga agaagctgct gcacaggggc ttgttgcagg cataaatgcc
     4501 tataattatt taaataataa agaaatgctc gagctttcaa gaagcaactc ctacatcggc
     4561 acattgattg atgaccttgt gacaaaagat attcaagagc cttacagaat gcttacctcg
     4621 cgttcggaat acaggctgct tctgcgtcag gataacgcag atgaaagact
//
LOCUS       DABS01000033            3256 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15973, whole genome shotgun sequence.
ACCESSION   DABS01000033 DABS01000000
VERSION     DABS01000033.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3256)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3256)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3256
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..107)
                     /locus_tag="CPT85_01215"
     CDS             complement(<1..107)
                     /locus_tag="CPT85_01215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012002524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="DAB26660.1"
                     /translation="MSVESILESIEKLTLLEAAELVKAMEEKFGVSAAAP"
     gene            complement(138..659)
                     /locus_tag="CPT85_01220"
     CDS             complement(138..659)
                     /locus_tag="CPT85_01220"
                     /inference="COORDINATES: protein motif:HMM:PRK00099.1-3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="DAB26661.1"
                     /translation="MATKAFKEQKIAHIKESAQKAKVAIVTNYKGLSVEEITNLRRAL
                     QKAGADYTVTKNTLAKIAMKGTDFEVLADSMKESTAIAFGFEDEVSAAKVVAKFIKET
                     KKAEVICGALDGQLLDAKQVEALAKTPSKEELYAKMLGCVNSPATGIVGSVNAVMSSL
                     VRAIDAVAKKKTA"
     gene            complement(921..2114)
                     /locus_tag="CPT85_01225"
     CDS             complement(921..2114)
                     /locus_tag="CPT85_01225"
                     /inference="COORDINATES: protein motif:HMM:PF07690.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26662.1"
                     /translation="MNENNTNCNAMQEENKKAVAWLTLGHGMADSYSGFINPILPFIV
                     ANIGTTLAAATCALSASQLFSSMMQPVFGFIADKWRKRFFIFWGIILASIFFSLTGLV
                     QNIWQLALCLILGGVGVGFYHPQATGFVVRYSGKNLAKYMSIFIAAGTIGYSVGPIIS
                     SSITQFFGVTKLPLAASWGILFALAVFLFVPKISHQPVPKDTTSFKTAVTDIFKNKTV
                     RILIMVSALKSLVTSSFSVLLPFYWKSLGYSAFQIGIAVFLFLTVGAFGTYISSKYEK
                     LIGYKNVFYTSLIVPFILTLVFVSLMKLSPVLSFILFILTGFVTMLSVSINMVMAQKT
                     MPQYKSMISGFIAGFSWGIVGVMLPLIGFVAQNVGIIKVLVVIAFIPFVLSYFVRFLP
                     DAQSE"
     gene            complement(2181..3125)
                     /locus_tag="CPT85_01230"
     CDS             complement(2181..3125)
                     /locus_tag="CPT85_01230"
                     /inference="COORDINATES: protein motif:HMM:PF01808.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26663.1"
                     /translation="MNDNYEKFFNAEPLALKYGENPHQKAFIYINNDNAQFENLSDVE
                     LSYNNLLDINCAALIAAEFYDVNAAVIVKHNTPCGAALGKTLNEAYLKAFDTDPVSTF
                     GATIAFSKTVDKEIAKHASSVFLDAVIAPDFDPDALEILKKNEALRIIKLITPYKTIR
                     TMQEQEVHITPFGTLVQETDNKELDKDTFKVVSKTKPDAEMIEDMVFAWKIAKHVKTN
                     AVVVAKDFKTLSIVGGQTSRIDAVETALDRACEGAKKAVIACDGFIPAIDSIQAAAQC
                     RIGGIIQTGGTHKDKDVVDAANKYEIAMITTGIRHFKH"
BASE COUNT          980 a          644 c          552 g         1080 t
ORIGIN      
        1 ggagcagcag cagatacgcc gaatttttct tccatagctt ttactaattc agctgcttct
       61 aacaaagtta atttttcaat tgattctaaa atagattcta cactcatgat tttctccttt
      121 tattattttt gtgtatttta tgctgttttc tttttagcta cagcgtcgat agctcttaca
      181 aggctgctca ttacagcgtt gacagaacca acaatacctg tagcaggtga atttacgcag
      241 ccaagcattt ttgcgtaaag ttcttcttta gacggagttt tagctaatgc ttcaacttgt
      301 tttgcatcga gcaattggcc gtctaatgcg ccgcagataa cttctgcttt ttttgtttct
      361 ttgatgaatt ttgcaacaac ttttgctgca gaaacttcat cttcaaaacc gaatgctata
      421 gcagttgatt ctttcataga atcagccaga acttcaaaat cagttccttt catagctatt
      481 ttggctaatg tattttttgt aactgtataa tcagcacctg ctttttgaag agctcttctc
      541 aagttagtga tttcttcaac agataaacct ttatagttag ttacaattgc tactttagcc
      601 ttttgtgcac tttctttaat atgtgcaatt ttttgttctt taaaggcttt tgttgccatg
      661 ttttgctcct tttatattta tgtttatcga ccttttttta tttatttgca tacaaaaaat
      721 gattttgcat acaaccgcaa aatcattaca tcaattataa attaacctat atttggaaaa
      781 ttatccttga atttatgacc tcgatgagct ttttgtttta aggagtcttc actccgctca
      841 ttgtctgcgg ttcgtataaa caatattatt taaaacatga ttagaaatca accatggcaa
      901 ttaatatatt gtaataattc ttattcgctt tgagcgtcgg gcaaaaatct cacaaagtaa
      961 gaaagcacaa atggaatgaa tgcaattaca acaagcactt taataatacc cacattctgt
     1021 gctacaaaac cgattaacgg cagcattaca ccgacaatcc cccagctgaa acctgcaata
     1081 aagcccgaaa tcatactctt gtactgcggc attgtttttt gagccattac catgtttatg
     1141 gaaacggaca acattgtcac aaagcctgtc agaataaaca aaataaaaga taaaacgggc
     1201 gaaagcttca taaggctaac aaatacaagc gttaaaataa aaggtacaat caaagatgtg
     1261 taaaacacgt ttttgtagcc tattaatttt tcatatttgc tgctgatata agtaccaaaa
     1321 gcaccaaccg tcaggaataa aaatactgct ataccaatct gaaaagcact gtagccgagg
     1381 cttttccagt aaaaaggtaa cagcacacta aaacttgatg ttacaagcga ttttaaggcc
     1441 gaaaccatta ttaaaattct tactgttttg ttcttaaaaa tatcagttac cgctgtttta
     1501 aaagatgttg tgtcttttgg taccggctgg tggcttattt taggcacaaa caaaaatacg
     1561 gcaagagcaa ataaaatccc ccagcttgca gccaaaggca gctttgttac tccgaaaaac
     1621 tgtgttattg aagaggatat aataggccct acagagtatc ctattgtgcc tgcggcaata
     1681 aaaatactca tgtactttgc cagattttta ccgctgtacc ttacaacaaa ccccgttgcc
     1741 tgcgggtggt aaaaacctac acccacaccg cctaaaataa gacataacgc gagctgccat
     1801 atattttgaa caagccctgt aagtgagaaa aatatcgatg ccagaataat gccccagaaa
     1861 ataaaaaatc tttttctcca cttgtcagca ataaacccga atacaggctg catcatagaa
     1921 gaaaaaagtt gcgaagcact aagcgcacag gttgcagctg caagcgttgt acctatattt
     1981 gcaacaataa aaggcaaaat aggattgata aaacctgaat aactgtcagc cataccgtgc
     2041 cccagcgtaa gccaggcaac tgcttttttg ttttcctcct gcattgcatt acaatttgtg
     2101 ttattttcgt tcatttaatt tcctttaata atgttaggca caacttactt ttatcagaaa
     2161 cataattttt atacaacctg ctagtgttta aaatgtctta tgcctgtagt aatcattgct
     2221 atttcatatt tgttggcagc atcaacaaca tctttgtctt tgtgagtgcc tcctgtttga
     2281 ataattccgc cgattctgca ttgagcagct gcttgtatac tgtctattgc aggaataaat
     2341 ccatcacatg cgattacagc ttttttggca ccttcacagg ctctgtccag agctgtttct
     2401 acagcatcaa ttctgcttgt ttgtcctccg acgatagaca gagttttaaa atcttttgca
     2461 acaacaacag catttgtttt tacgtgtttt gctattttcc acgcaaatac catgtcctca
     2521 atcatttctg cgtcgggctt ggttttagaa acaactttga acgtgtcttt gtcaagctct
     2581 ttgttgtcag tttcctgcac aagcgtaccg aacggagtaa tgtggacttc ctgttcttgc
     2641 attgtgcgta tggttttgta aggagtgatg agttttatta ttctcaacgc ttcgtttttc
     2701 ttaagaattt caagtgcgtc agggtcaaag tcaggtgcaa ttaccgcatc aagaaaaacg
     2761 gatgacgcgt gttttgcaat ttctttgtcc actgttttag aaaaagcaat tgttgctccg
     2821 aatgtgctca cagggtcagt gtcaaatgct tttaaataag cctcgtttaa agtcttgcca
     2881 agtgctgcgc cgcagggagt gttgtgttta acaataacag ctgcattaac atcgtaaaat
     2941 tccgcagcaa ttaatgccgc acagttaatg tctaacaaat tgttgtaaga aagctcaaca
     3001 tctgaaaggt tctcaaattg agcattgtcg ttatttatat atataaaagc cttttggtga
     3061 gggttttctc cgtatttcaa ggccaggggt tctgcattaa agaatttttc gtagttatcg
     3121 ttcataataa atccctttta ttttctgatt cataaatcaa tttatcacaa aagacacccc
     3181 ctgtctgtcg tcgtgtcgtc gagtaacaaa atttataatg attgacccct aattaaaaaa
     3241 tgttaaaaat agtata
//
LOCUS       DABS01000034            3366 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_30666, whole genome shotgun sequence.
ACCESSION   DABS01000034 DABS01000000
VERSION     DABS01000034.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3366)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3366)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3366
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..763
                     /locus_tag="CPT85_01235"
     CDS             <1..763
                     /locus_tag="CPT85_01235"
                     /inference="COORDINATES: protein motif:HMM:PF13524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26656.1"
                     /translation="SLVHGYIPGGTDLDFWKKQDVEKDLDITFFGSIDDPDAMIQKLK
                     DTMPDLVFKLMMNFCDVALANPDLSLWHISQIFNKQADIVLDMEQYHLISKSISYIIT
                     YKQRIKMIQALKDFNVTIFGEGPWEKFAQGKIKVVSGGDVNDTVNLMNRSKITLNSHP
                     FHLAGGIHDRVLNASAVETMLLCGREKTVNAEFGDTIAYCNPVTYEDIAQKADYFLTH
                     EDERQQKALEASKIVKTKHKWSDRAQSIMDIIDIR"
     gene            complement(747..1370)
                     /locus_tag="CPT85_01240"
     CDS             complement(747..1370)
                     /locus_tag="CPT85_01240"
                     /inference="COORDINATES: protein motif:HMM:PF01081.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26657.1"
                     /translation="MRIMNPIEAIYKNKIVAVIRAQEPEEAVEKAQAMIQGGIKVFEI
                     TVEKGQILPAVEQLSHNKDLTIMAGGIITSKRAQEAILKGAKVIVSPVFQINMLKFCT
                     GSKVPHIATVSTPNEAYNAWKSGIPIIKIFPAKSMGEVEYIEDVLRPMPFLNLMPAGG
                     ISIDDFTCYLKAGAVAVGMGRCLYKDAGLKEITERSKYVVNRLNECL"
     gene            complement(1371..2297)
                     /locus_tag="CPT85_01245"
     CDS             complement(1371..2297)
                     /locus_tag="CPT85_01245"
                     /inference="COORDINATES: protein motif:HMM:TIGR00159"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00159 family protein"
                     /protein_id="DAB26658.1"
                     /translation="MLGEIKDILVNQLKFLHLTFNWVNVVEVLIIAAFLLLVYQKFIK
                     GTQSEKLVKGIFILLFAWLFSEILIKFNLLILGVFLRTMVSVIMFGAVIIFQPEIRKF
                     LGYLGQSNFFHAHFNKKNLKEEQKVNVIKELIESVKYLSKTRTGALMVLEREEDVNSY
                     SDVGIQLDAVLSTELILTIFHPNTPLHDGAVVISGDTIKSAGVLLPLTEDPKLSWKYG
                     TRHRAAIGMSEVSDSACLVVSEETGDVSIALDGTLRKYEDITKLKKDLEILLGYEDED
                     IVEENKTVFNFIKIKTKKQASQQDKKNDKMSK"
     gene            complement(2307..3365)
                     /gene="lysA"
                     /locus_tag="CPT85_01250"
     CDS             complement(2307..3365)
                     /gene="lysA"
                     /locus_tag="CPT85_01250"
                     /inference="COORDINATES: protein motif:HMM:TIGR01048"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="DAB26659.1"
                     /translation="MVSGGEIYTAYTAGADMKKCLFNGNNKSFDELQMAMELAVGLVS
                     VDNFLELALLNDVAKSNGKSVDILLRVTPGIECHTHEYIQTGHLDSKFGFDLTQVDDA
                     IELLQEQYNNLNLVGLHAHIGSQIFETSIYYDEVEVLLKEIARIQEKFGIKLTHINLG
                     GGLGIKYTEADCPPSVAEIAQKIITSVKENSAKYNVEEPEIHIEPGRSIIGTSGVTLY
                     TVGSSKQVPHGKKYIAVDGGMADNPRPSLYQAVYTAEVANRPDAEAVETVTIAGRFCE
                     SGDILIKDVKMPELEEGDILCFYDTGAYGYSMSSNYNRVLKPAAVLVNNSQSDIIIDR
                     ENYEHLVSLDVIPERLKK"
BASE COUNT          976 a          666 c          574 g         1150 t
ORIGIN      
        1 ttctttggta cacggttata ttcccggagg tacggatctt gatttttgga aaaaacagga
       61 tgttgaaaaa gaccttgata taactttctt tggctcaatt gatgatccgg atgcaatgat
      121 tcaaaagctt aaagacacaa tgcccgatct tgtttttaaa ctgatgatga atttttgtga
      181 tgttgctctg gccaatcctg atctgtcttt gtggcatatt tctcaaattt ttaacaaaca
      241 ggctgatatt gttttggata tggagcagta ccatttaatc tctaaaagca tatcttatat
      301 cattacttac aaacaaagaa taaaaatgat acaggctctt aaagatttta atgttactat
      361 ttttggcgaa ggaccgtggg aaaaatttgc tcaaggaaaa ataaaagttg tatcaggcgg
      421 tgatgtaaac gataccgtca accttatgaa tcgctccaaa attacactca actctcatcc
      481 tttccatctt gcaggcggta tacacgacag agtgctcaat gcttctgctg ttgagacaat
      541 gctgctgtgt ggcagagaaa aaactgtgaa tgcagagttt ggcgatacta ttgcatattg
      601 caatcctgta acatatgagg atattgcaca aaaagccgat tacttcctta ctcatgagga
      661 tgaaagacaa caaaaagcac ttgaggcttc caaaatagtt aaaaccaaac acaaatggtc
      721 ggacagagct caaagcatta tggatattat agacattcgt tgagcctgtt aacaacgtat
      781 ttagaacgtt ctgtaatttc cttcagacca gcgtctttat acaaacaacg gcccattccg
      841 acagctactg cgcctgcttt taaataacag gtaaaatcat cgatagaaat ccctccggca
      901 ggcataaggt ttaaaaatgg cataggtctt aaaacgtctt ctatatattc cacttctccc
      961 attgattttg cagggaaaat tttaataatc ggtattcctg atttccaggc attgtaagcc
     1021 tcattgggag ttgatactgt agctatatgc gggactttac ttcctgtgca aaatttcagc
     1081 atattgattt ggaaaacagg tgatacgata acctttgcgc cttttaaaat agcttcttgt
     1141 gcacgttttg aggtaattat ccccccagcc attattgtca aatctttgtt atgcgataac
     1201 tgctcgaccg caggcaaaat ttgccctttt tccacagtta tttcaaacac cttaatgccg
     1261 ccttgaatca ttgcttgtgc tttttcaaca gcttcttcgg gctcctgtgc tcttatgact
     1321 gcaactattt tgtttttata aatcgcttca atagggttca taattctcaa ctattttgac
     1381 attttgtcgt ttttcttatc ctgttgcgac gcctgttttt ttgtttttat ttttataaaa
     1441 ttaaatactg ttttgttttc ttcaacaata tcttcatctt catatccaag cagaatttct
     1501 aaatcttttt ttaattttgt aatatcttca tattttctca aagtaccatc aagcgcaatt
     1561 gaaacgtcac ctgtttcttc tgatacaaca aggcaagctg aatcagacac ttcactcatt
     1621 ccaatagctg ctctgtgtct tgtgccgtat ttccagctga gttttggatc ttctgttaat
     1681 gggagcaaaa cccctgcaga ttttattgta tcgcctgaaa taacgactgc tccgtcgtgc
     1741 aatggtgtgt tcgggtgaaa aatagttaaa ataagctctg ttgataaaac ggcatcaagc
     1801 tgaataccaa catcagagta actgttaaca tcttcttctc tttccagtac catcaatgca
     1861 ccggttcttg ttttggaaag atattttacg gattcaataa gttcttttat tacgttaact
     1921 ttttgctctt ctttcagatt ctttttattg aaatgagcat gaaagaaatt tgattgcccc
     1981 aaatatccta aaaattttct tatctcgggc tggaatatga taaccgcacc aaacataata
     2041 acgcttacca ttgttcttaa aaatacaccg agaataagaa gattaaattt aatgagtatt
     2101 tcggagaata accaggcaaa aagaagtata aaaataccct ttaccagttt ttctgactgc
     2161 gttcctttga taaatttttg ataaacaagc aataaaaatg ccgcaataat aaggacttct
     2221 acaacattta cccagttaaa ggtcaaatgc agaaatttta gctgattaac cagtatatcc
     2281 tttatctctc ctagcacttt ttatccttat tttttcagtc tttctggaat tacatctaat
     2341 gaaaccagat gctcataatt ttctctatct ataataatat cagattgtga gttatttaca
     2401 agtactgctg ccggttttaa tacacggttg taattgctgg acattgaata tccatatgca
     2461 cctgtatcat agaaacacag aatatctcct tcttcgagtt ccggcatttt tacatctttt
     2521 attaaaatat cgccagattc acagaatctt cctgctatcg taacagtttc tacagcttca
     2581 gcatcaggtc tgtttgcaac ttctgccgta taaacagcct gataaaggct gggtctgggg
     2641 ttgtctgcca taccaccgtc tacagctata tattttttac catgaggcac ctgttttgag
     2701 ctgcctacag tgtatagtgt tactcctgat gtgcctatta tgcttctgcc cggttctatg
     2761 tggatttcag gctcttctac attgtatttt gcagagtttt cttttactga tgtaataatt
     2821 ttttgtgcaa tttcagccac ggaaggagga cagtctgcct ctgtatattt aattccaagc
     2881 ccgccgccaa ggtttatatg tgtgagcttt ataccaaatt tttcttgtat acgggcaatt
     2941 tctttcaaca acacctcaac ttcatcataa tatatggatg tttcaaaaat ttgtgacccg
     3001 atatgtgcgt gaagtccaac aagatttaaa ttgttatatt gctcttgtaa aagttcgatt
     3061 gcgtcatcaa cctgtgtcag atcaaaaccg aattttgaat caagatgtcc tgtttgtatg
     3121 tattcgtgcg tgtggcattc aatacccggt gttactctta agagaatatc cactgattta
     3181 ccgtttgatt ttgccacatc atttaaaaga gcaagttcca aaaagttgtc aacagaaact
     3241 aagccaacgg caagctccat tgccatttgc aattcatcaa atgatttgtt gtttccgttg
     3301 aacaaacatt ttttcatatc tgcgccggct gtgtatgctg tgtagatttc gcctccggaa
     3361 accaaa
//
LOCUS       DABS01000035           21044 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_1489, whole genome shotgun sequence.
ACCESSION   DABS01000035 DABS01000000
VERSION     DABS01000035.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 21044)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 21044)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21044
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(1..57)
                     /locus_tag="CPT85_01255"
     tRNA            complement(1..57)
                     /locus_tag="CPT85_01255"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(28..30),aa:Pro,seq:tgg)
     gene            261..719
                     /locus_tag="CPT85_01260"
     CDS             261..719
                     /locus_tag="CPT85_01260"
                     /inference="COORDINATES: protein motif:HMM:PF09858.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26504.1"
                     /translation="MVVKKVFFILLAVYSLFFILGGFSAPILAYFKIYDLSGAISYLF
                     SGSCHQMPDRSFWIMGYPMAICSRCLGIYTGSFFTCVTKAIRDGNIKNSVLIFILLLA
                     ATDIVLNFFFAVNTGIYCRFVAGIFIGILFVEYIERLVCFVINKNKKRKG"
     gene            722..1348
                     /locus_tag="CPT85_01265"
     CDS             722..1348
                     /locus_tag="CPT85_01265"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26505.1"
                     /translation="MKLKKIVSTCLIALLVFFSMPVSTTGAANIQSKETLLEFLKNTD
                     KIEARMEYPSMLLASNVKGKVNAVKLPSMTPLVIRATENISTRDIVSGSVVNFAVVSE
                     VKDKNGRVLIKAGAPVTAQITFAKKRSFVGIAGDLTVSDFHVTAVDGTYVPLVGNVSQ
                     KGDDKIVLTVVLSVLICPFFLFMKGEDARIPVGTTKPAYTATDVYITP"
     gene            complement(1383..1805)
                     /locus_tag="CPT85_01270"
     CDS             complement(1383..1805)
                     /locus_tag="CPT85_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017751352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26506.1"
                     /translation="MEKKMNKFSKSLIKILCVSVIFSAAYTGIAPFIPTQGSAANAQE
                     EEKYYKTVRARHILVDSEDEAWALKSRITEGESFEELAKMYSKCPSKEKGGDLGYFVR
                     GQMVPEFENAAFATPIGGVSDPVKTRFGWHLIKVVRKM"
     gene            complement(1928..2779)
                     /locus_tag="CPT85_01275"
     CDS             complement(1928..2779)
                     /locus_tag="CPT85_01275"
                     /inference="COORDINATES: protein motif:HMM:PF01551.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26507.1"
                     /translation="MSKKFDYVFYNKYMKLLCVNNVSFKKPLNAVKTGLTALLVCTPA
                     SVGDSFCKVTTKTFEPKAKVVLTKSLTQGLEVIEDINCRGGATHSFSETAVKKLKSII
                     ASLDNKTYVFPIDTALHPYIPSTGQFGSIRPAGRAHLGVDIYPRLYGRKPKTPVAVVS
                     ATDGIVVSVKKSPEYDPKNLIANNIKILGTDGKIYSYDHLGRPEDYKNAKYTPLKKLG
                     EVVHSGDTLGTVGKTGETDVWHLHLGVEDLDEKAKQLKNPQWQKLFKHHSVYATPRGX
                     XPVRQAK"
     assembly_gap    1951..1952
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2847..4349
                     /gene="rfaE1"
                     /locus_tag="CPT85_01280"
     CDS             2847..4349
                     /gene="rfaE1"
                     /locus_tag="CPT85_01280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005876252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="DAB26508.1"
                     /translation="MLGAKIINGFKNLNILCIGDIMLDKFLYGEVERISPEAPVPIFK
                     VTKEKSMLGGTGNVIANLAALGVQTMFIGAAGNDESSVMLEHFLDKTGCNYSLIKPDN
                     YPTTTKIRMIASNNHLLRADKESFLNADDSVLKELSEMLEKVVDKADIVLVSDYKKGL
                     LTLQSTQMIIQTCKKHGKKVLLDPKERDFSKYAGADIVKPNLKEFELVSGKKFDTSSA
                     TFKQEIKQEALAVMKQYNIHSLLITLSKDGMIFISSDSTKEPVHIPAEAKEVFDVSGA
                     GDTSLAVLGASIAAGLCIEDAMKLANLASGIVVGKLGTACVSPTELKNALINNNSSGK
                     LSQALKIIGFDEAAEIAQDLKIQGKVTGFTNGCFDVMHLGHIHSFAGAKKECDVLFVG
                     INSDISERKIKGEKFPLQNEKTRAYVAASLEFVDYVVLFDEESALELVKKIKPDVIAK
                     EGLKLENWPEAQYVLSYGGKVVELDRVEDYSVTAVLDKIDNIKSDGVLNV"
     gene            4342..4891
                     /gene="gmhA"
                     /locus_tag="CPT85_01285"
                     /pseudo
     CDS             4342..4891
                     /gene="gmhA"
                     /locus_tag="CPT85_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011116371.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
     assembly_gap    4488..4490
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5520..5831)
                     /locus_tag="CPT85_01290"
     CDS             complement(5520..5831)
                     /locus_tag="CPT85_01290"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26509.1"
                     /translation="MXXSKKQNLTDFFKGSIEYLKQAPLNKDSQKRTNNDLTIIKNAF
                     DKFVTPEQKIQQIEILEKAQRNFKQFKNGLGVITSVGASIIACNMIXPEILQQIIIKK
                     N"
     assembly_gap    5560..5561
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5752..6222)
                     /locus_tag="CPT85_01295"
     CDS             complement(5752..6222)
                     /locus_tag="CPT85_01295"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26510.1"
                     /translation="MPKASGFQNLIEKVWGQYGDDVGKSLIHLGAVGWFFSAVAQIGM
                     IATNKDIEKKEKKFLIPQEIADGVINVGLYYSICQAIKYIGDSLAENSVIMTQTTEKT
                     IRDINREVPSTVGNFVDGVVSELKRNKIIEXIKKTKFNRFFQRLNRILKTSTAE"
     assembly_gap    5825..5826
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(6209..6721)
                     /locus_tag="CPT85_01300"
     CDS             complement(6209..6721)
                     /locus_tag="CPT85_01300"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26511.1"
                     /translation="MGKHINSPEQRLIQGATALAMQPLIDFNNKAADDDTRAVSVART
                     IGKIIAGTIVGVGVRYASIYAAKQFSRYTLKEGPKYLTQINRKSKRDILLPKFDCEKT
                     PIKKQDFLDKYDKSVKTLGTIIATFAMIFTNFLIDAPLTRIITKKLTSRVKAKIEDDK
                     MPLEVKDAKG"
     assembly_gap    6733..6734
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(6869..7516)
                     /locus_tag="CPT85_01305"
     CDS             complement(6869..7516)
                     /locus_tag="CPT85_01305"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26512.1"
                     /translation="MRVGAITASYTHKIKKQNQKQQSFKADVQIGRIYIDSFGEKNQL
                     KYNEVCALNSLLKYAQTAYKNVGTDNNLVILYPYLEKDEKTKQQYADIEVCFMNKNAE
                     EARRAILNNKHRLYKEYGDSVKKDLQALADRDETAMKSLTVPYKWSFIRGRGRDWGEP
                     LQNVPTKKDLDFSINCIVKDKLSCYIFDTEKELVVIEPPKPKSYDNDIYMPIGGW"
     gene            complement(7621..7989)
                     /gene="crcB"
                     /locus_tag="CPT85_01310"
     CDS             complement(7621..7989)
                     /gene="crcB"
                     /locus_tag="CPT85_01310"
                     /inference="COORDINATES: protein motif:HMM:TIGR00494"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="DAB26513.1"
                     /translation="MLNILAVFLGGGIGAACRYLITMISNRFFGIAHWGTFSANIIGC
                     FLIGYIFGYTLEKAQGFPPALKLFLTVGFLGGLTTFSTFSCESFCFLRDGKILHCALY
                     MLASFAIGLCATFAGFMLAK"
     gene            complement(7990..8883)
                     /locus_tag="CPT85_01315"
     CDS             complement(7990..8883)
                     /locus_tag="CPT85_01315"
                     /inference="COORDINATES: protein motif:HMM:PF13641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="DAB26514.1"
                     /translation="MAKDISIILVNYKTKDLAKQCIESIYEKTHDVNFDIYVVDNGSD
                     DGIEELLKQEFPGIKFLQSNENKGFGAGNNIALRVFDAKYAFLLNTDTILINNAVKIL
                     FDFMEANPKTGACGGNLYDEQGQNIHSYGNIFDLTDLFLKTFNLRYFFPKRHRKMKDG
                     GCNSKNELKSVDFITGADLMLRKEALDKAGLFDERFFMYSEEAELQYRIKKSGYDIFI
                     NPEAKILHLHNKSPKKREKMYFEFLKSKYLLFRLCYGSKSNLWFIKMLLYISCINKIF
                     SHREAICSLFDFIRKDKIEVN"
     gene            9054..10961
                     /locus_tag="CPT85_01320"
     CDS             9054..10961
                     /locus_tag="CPT85_01320"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26515.1"
                     /translation="MKINRINNLNSVYYSKNNAKSEHSGSVKYESNSNVLSHQLNSLA
                     YANKYMTALSFKGALDSEEKNFKLNLNFDELKRRTSPDNFAAYTLIDESNDAYKKLSQ
                     GDKTALKHLVKAAKILEEVYLMQDNPHNIEFKNYLEEQTLKGNEQARLTLQLFNAQKG
                     INAKDIEGGSVNLARGIEPKLQRGFYPEDLTEDEFHNILILMIKKNKISEVKKILNQR
                     TMVERDGKYLKATDYTDYFKEQFVNAATELELAALTSSNDDFNRYLILQANALMMNNP
                     YMDALADKKWAKLQDTPLEFTITRESYDDRMTPSVNKNKKLSAMLKKLGITPYAKDNI
                     GVRVGIVNKEGTEYLLKIKDYMPLMADNMPFKEEYEQNITQNDNKQTMVDVEMVDMTG
                     QLGAYRGAISLASNLPNNDKLSVISGGGKRNVYHIQMREAKYADNITKKLDAILNKSQ
                     HKYFDTQALHDFTILHENVHSLGPKNGTEKLGIYKNTIEENKADMGALVMLDVLTKNG
                     FYTPLQQKKLLVSYFSAYVQKGPDFSNAHRLRNIMQNNFFIKEGALSVDDNGIMTVNF
                     EKVTPAANKMLKQIIRLQLDGTQKDAQEYIKQNAVWSDELDKIAHNIKQADSTLNARI
                     VSPLADKLAVQ"
     gene            11061..11777
                     /locus_tag="CPT85_01325"
     CDS             11061..11777
                     /locus_tag="CPT85_01325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004264974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="DAB26516.1"
                     /translation="MLLGVNIDHIXIATLRNARGGLEPNLIQAAILCEKAGADGITVH
                     LREDRRHTRDNDVIELKDILKTRLNLEMALTDEMQKIALDVKPENVCLVPEKRQEVTT
                     EGGLDVASRVEFVTDFVKPLVDAGIIVSLFIDADKEQVEAAAKTGAQFIELHTGRYSE
                     AWGTPLEDKELNHLKEGAALAAKLGLKVNAGHGLTYENVHRMHEIPELIELNIGHNII
                     ARAVFDGLEKAVKDMKDLIV"
     assembly_gap    11091..11092
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            11871..12062
                     /gene="rpmB"
                     /locus_tag="CPT85_01330"
     CDS             11871..12062
                     /gene="rpmB"
                     /locus_tag="CPT85_01330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013538464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="DAB26517.1"
                     /translation="MAKQCAVCGKTRLKAAKISFSHKQHVHRQEVNLQSVKVNQNGTV
                     KRIDVCTSCIRAGKVQRAV"
     gene            complement(12115..12303)
                     /locus_tag="CPT85_01335"
     CDS             complement(12115..12303)
                     /locus_tag="CPT85_01335"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26518.1"
                     /translation="MAPSESNYTNTENQAPKAKKADNSETKAQLMKIQEEMKKEQMQE
                     AKKAMEEGMKKDLKSFEA"
     assembly_gap    12314..12320
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            12610..13296
                     /gene="atpB"
                     /locus_tag="CPT85_01340"
     CDS             12610..13296
                     /gene="atpB"
                     /locus_tag="CPT85_01340"
                     /inference="COORDINATES: protein motif:HMM:TIGR01131"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit A"
                     /protein_id="DAB26519.1"
                     /translation="MSEGHWIAHLGQFNVNVDTVVTMWITMGILIVFAFLATRKMSII
                     PTKLQAVAEGILGAFVGLTDSMIGKNGRKHIPLLATLFLFILTANLLGQLPWRLYHLK
                     TGELASPTNDINMTAAMAIMVLIYYVYQGVKVKGLKYFLHEFSAVGIIMALIELLEMV
                     VRPFSLALRLFANILAGELLIVTFVGLCAYLLPLPFMLFEVFVAFVQALVFMLLSTAY
                     IAMAAQEEEH"
     gene            13339..13584
                     /gene="atpE"
                     /locus_tag="CPT85_01345"
     CDS             13339..13584
                     /gene="atpE"
                     /locus_tag="CPT85_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015708845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit C"
                     /protein_id="DAB26520.1"
                     /translation="MAVEQVAVEVASMAKLGAGIAIGFGAIGAGIGLGIATKGLLDAV
                     SRQPEIAGKALIYFIIGAGLAEACAIYALFIALQLLG"
     gene            13609..14085
                     /locus_tag="CPT85_01350"
     CDS             13609..14085
                     /locus_tag="CPT85_01350"
                     /inference="COORDINATES: protein motif:HMM:PF00430.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26521.1"
                     /translation="MEINATILVSAISFIVFIFIMNKILYKPVLEIMEKRQNYIDANK
                     NEADEHHKKAQQLLVDKDARVAEAQRTSRDIVASKADAIKEEKSKVLNDTKDSVTSYF
                     SEQKQNLAHQKDEAAANMKYDVADLANRLTTKLMGEGIAFEPVGEQEVEEVMKKNA"
     gene            14078..14581
                     /locus_tag="CPT85_01355"
     CDS             14078..14581
                     /locus_tag="CPT85_01355"
                     /inference="COORDINATES: protein motif:HMM:PF00430.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26522.1"
                     /translation="MLDFSFSNILHSNVINFAIMIALFAFIAYKLKVGQKIEDMTASI
                     KSKVEESDAIKEEAKKDFQNIADSLEHIEDELKAIVDKAEQTAKSFEQKAREDLDKSV
                     ALLKQNIEKQIETEQNHIKGELLNNVASSSIEIAQRQIKTALDKDKQLHRKYIEDFIN
                     SIDKADV"
     gene            14594..>14995
                     /gene="atpH"
                     /locus_tag="CPT85_01360"
     CDS             14594..>14995
                     /gene="atpH"
                     /locus_tag="CPT85_01360"
                     /inference="COORDINATES: protein motif:HMM:PF00213.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="DAB26523.1"
                     /translation="MTSKTIDNKLIPLAKRYSDALSEVAKSKNELDNVKNDLQTVCEA
                     MDSVAELANFLAHPVIPLTEKKEMVKSVFEGKINNDVLNLIFILLEKNKINLLGAILY
                     CFEESMDEANNILKVGVVSAVEVDEDLKQRLK"
     assembly_gap    14996..15020
                     /estimated_length=25
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            15028..15150
                     /locus_tag="CPT85_01365"
     CDS             15028..15150
                     /locus_tag="CPT85_01365"
                     /inference="COORDINATES: protein motif:HMM:PF00213.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26524.1"
                     /translation="MKFEFDINPEIIAGLVLKIQDKTIDGSMAAKLEGFKKVLR"
     gene            15178..16695
                     /locus_tag="CPT85_01370"
     CDS             15178..16695
                     /locus_tag="CPT85_01370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006909873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="DAB26525.1"
                     /translation="MATIRPDEITSIIKAKIENYASEMEVSNIGSVLEVGDGIARVYG
                     LRNAMSNELVEFEDGKGTLGITLNLEEDNVGVVILGEYQHIKEGMTVKTTGRIASVPV
                     GDGLIGRIVNPTGKPVDGKGDIHYEKTRPVERVAPGIVSRKSVHQPLQTGLTAIDALT
                     PIGRGQRELIIGDRQTGKTAIAIDTIINQKGQDVICVYVAIGQKTSTVAQLAKKLEDF
                     GAMDYTIIVSATADESAPLQFIAPFAGVAIAEEFMEQGKHVLIVYDDLTKHAQAYRAM
                     SLLLRRPPGREAYPGDVFYLHSRLLERACKLSDKLGGGSITALPIIETQAGDVSAYIP
                     TNVISITDGQIFLETGLFNSGIRPAINAGISVSRVGGAAQTKATKQVGGKLRLDLAQF
                     RELEAFAQFASDLDKATQDQLKRGQKLTEVLKQPQYSPLSVAKQVSILFAANEGILDD
                     IDNKNIQKFKKEWFEYFDANMSDLAQRLNDGAALSDEDKKALKENLETFKSSLFN"
     gene            16634..17644
                     /gene="atpG"
                     /locus_tag="CPT85_01375"
     CDS             16634..17644
                     /gene="atpG"
                     /locus_tag="CPT85_01375"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="DAB26526.1"
                     /translation="MKTKKLSKKTWKLSNHLYLIKGKSMPNLLDIKDRISSIQNTKKI
                     TKAMKMVAAAKVKKSQIKVISARPFSRALGEAFAKVLASTEGFSSNGLKIERAIDNYP
                     VLMQKREQKTAGILVVTSNKGLAGAYNANVIRFTLKRIQEYKEKGIDSKLFIVGTKGV
                     ASLKRRAQEQGFEIVQAYTKISQEPSSSNAIVIAEDMAQAFVDNKIDSIEIITTRFKN
                     MMSYKVEDWKILPVDDVEKALGDKHTESHSIDPLMAFEPDSDHILQKIVPMFITNIIY
                     QALLEAVASELAARMTAMSSATNNADEMIRLLTIDYNKARQAAITQEISEVVSGADAL
                     KN"
     gene            17691..18536
                     /locus_tag="CPT85_01380"
     CDS             17691..18536
                     /locus_tag="CPT85_01380"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011877431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-NADP reductase"
                     /protein_id="DAB26527.1"
                     /translation="MGYKILRKKELCANQYELTIHAPYITKNAQAGQFIILRVSKDGE
                     RVPLTIADYDREKGELTIVFMAVGYTTKQLATLEVGDELVDIVGPLGQPTHIEKYGTV
                     VCLAGGYGAAPCYLIAKAFKEAGNKVYMIMGARTKDLIFWQDKMKDACTELFITTDDG
                     SLGTKGFVTGVMEDIMNKEKVDYAIAVGPMPMMRAVAELTRGKGIKTEASMNPIMVDG
                     TGMCGACRVTVGGEVKFACVDGPDFDAHQIDFDEVINRTKIYKDYEKKRSENCNLYKQ
                     AESLK"
     assembly_gap    18771..18875
                     /estimated_length=105
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<18876..19909)
                     /locus_tag="CPT85_01385"
     CDS             complement(<18876..19909)
                     /locus_tag="CPT85_01385"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26528.1"
                     /translation="MADTTTIQIRPTETGWILSKKGKDGKDVTLEIADKDKNGLLDIG
                     TDVEIGKNQNIFTDEEIQASSDYIFSVKNGKAPVDGFDEKSQELEEEIAAKYNEQQRE
                     QRLQQALHGNTDYKGATKSAKRNNLWSKINMGMMIGAGALNTVMPFLFRPWQYNGGNL
                     WDMQGVLFSSMTNLMSSANTIMMAQYANKANQYIQSPQTSGNYKTLNPSNISVQDFMN
                     SVEIYNKQQQEQAEKYKQEKEAAQVKQEAERTAAFAKSIYTKANEEGAVIDDSNKAKL
                     NDIYKTYKKPEEYTQEEKEIMQTIGAYPQIPYNAVAKDDEESGKLTKELASQIDNLLK
                     LYETESESNNL"
     gene            complement(20007..21029)
                     /locus_tag="CPT85_01390"
     CDS             complement(20007..21029)
                     /locus_tag="CPT85_01390"
                     /inference="COORDINATES: protein motif:HMM:PF02518.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26529.1"
                     /translation="MEYTDLKTASQTHHITKTTINTARSKIILALCVSALFIIFVVGL
                     YTYYLYINIRQLIKGIMALSKGNYKRKVRLLTSVFTPHETVFLAQEFNKMADEINNTY
                     RQLKHSNRELKKLDEFRSNLIDTVSHEFRTPLTSIKGYTSRLLRQDIELDEETIQKSL
                     KIIKNQSERLSRMVEDLLVIPDIEGAKLNLILQEVNLEDSLNDAILSTKHKAQREIIV
                     NIPDNIPEVIADTDRLEQVFINLVENAYKYSYENTAIQINVNIEKNHAIVKISNSYDY
                     IPHDKLQKLFGKFTRIDDKTTRTTRGTGLGLFIVKGLVLAMNGAIELESTKDNVFSVI
                     IKLPLA"
BASE COUNT         6561 a         3637 c         4004 g         6692 t
ORIGIN      
        1 aggattcgaa cctgcgaccc cctcgtccca agcgaggtgc gctaccaagc tgcgctacat
       61 cccgaaatca tggtttaacg caatttgcgc tatatccgaa ggttttaatt ctgcaaataa
      121 caattgccta tttaattttc aaattgctaa tcaaatttgt aactttgagt ttatcaacaa
      181 caagtgttac agtcaagaga tattctttat acaactgtat acaaaatatt gctttttatt
      241 gccgaggagg ttattatact ttggtggtta aaaaagtttt tttcatatta ttggctgttt
      301 acagcttgtt ttttatttta gggggctttt ctgcacccat tttggcatat tttaaaattt
      361 atgatttgtc cggtgctatt tcttatttat tttccgggtc atgccatcaa atgccggata
      421 ggtccttttg gataatgggt taccctatgg ctatttgtag cagatgtttg ggtatatata
      481 cgggttcttt ttttacctgt gtaacaaaag ctatccgtga tggaaatatt aaaaattctg
      541 ttttaatttt tattttgctg cttgccgcaa cagatattgt tttaaacttc ttttttgctg
      601 ttaatacggg tatttactgc agatttgttg ctggtatttt tattggtata ttatttgttg
      661 aatatattga acgtctggtt tgctttgtta taaacaaaaa taagaaaaga aagggatgat
      721 tatgaagttg aaaaaaattg tgagcacatg tttaattgca cttcttgtgt ttttttctat
      781 gccagttagc acaacaggtg ctgcaaatat ccaatcaaaa gaaactttac tcgagttttt
      841 gaaaaacact gacaaaattg aagcaaggat ggaataccca tctatgctac ttgcttctaa
      901 tgtaaaagga aaggttaatg cagtaaaact gccttcaatg acaccattag ttattagagc
      961 aacagaaaat atttctacaa gagatattgt aagtggttct gttgttaatt ttgcagttgt
     1021 ttcagaagta aaagataaaa atggcagggt tcttattaaa gctggtgcac ctgttacagc
     1081 acaaattaca tttgctaaaa aacgttcatt cgtaggtata gcaggagatt taacagtctc
     1141 tgatttccat gttaccgctg tagacggaac atatgtgccc cttgtgggca atgtcagcca
     1201 aaaaggggac gataaaattg tgttgacagt tgttttaagc gtgcttattt gtccgttctt
     1261 tctttttatg aaaggcgaag acgcacgtat cccggtggga acaacaaaac ctgcttatac
     1321 tgcaacagat gtttatataa caccttaagg aaaaataaaa aggagaagat tatcttctcc
     1381 ttttacattt ttctcactac ttttatcaaa tgccagccga atcttgtttt tacagggtca
     1441 gagactcctc cgataggtgt tgcaaatgcc gcattttcaa attcgggaac catttgccct
     1501 cttacaaagt atcctaaatc gccgcctttt tctttggaag gacattttga atacattttt
     1561 gcaagctctt caaagctttc accttctgtg attcttgatt tcaatgccca cgcttcgtct
     1621 tcggaatcaa ccagtatgtg gcgtgcacgc actgttttat aatatttttc ctcttcttga
     1681 gcatttgcgg cactgccctg tgttggtata aaaggcgcaa taccggtata agcagctgaa
     1741 aatatcactg atacacaaag aatttttatt aaagattttg aaaacttatt catttttttc
     1801 tccattcgtt tttcaaattt taataaaaat tgtaattaaa cacaatacgt aatcaggcta
     1861 atttataatt tatctatata atcaaccttg gggcctttat cggttttgta ttgattcaat
     1921 atttttgcta tttcgcctgc cttacaggaa nntgtcctcg tggtgttgca taaacagagt
     1981 gatgtttaaa taatttttgc cattgtggat tttttagttg ttttgctttt tcgtccaaat
     2041 cttcaacccc tagatgcaga tgccagacat ctgtttctcc tgtttttccg acagtgccaa
     2101 gggtgtcgcc ggagtgcaca acttcgccaa gtttttttag cggagtgtat tttgcatttt
     2161 tatagtcctc agggcggccc agatgatcgt atgagtatat ttttccatcg gttcctaaaa
     2221 tttttatatt gttggcaatt aaatttttcg ggtcatattc aggtgatttt tttacactta
     2281 caactatgcc gtcagtcgca gaaacaacag caacgggtgt tttaggtttt cttccgtaca
     2341 ggcggggata tatgtctact cccagatggg ctctgccagc agggcgtatg gaaccaaact
     2401 ggcctgttga tggaatatac ggatgcaatg ctgtgtcgat agggaaaaca tatgttttat
     2461 tatcgagaga agctattatg gattttagct ttttaacagc agtttcacta aagctgtgtg
     2521 ttgctccccc gcggcaattt atatcttcga ttacttccag tccttgagtt aaagattttg
     2581 tcaaaacaac tttggctttt ggttcaaatg tttttgtcgt aactttacaa aatgaatctc
     2641 ccacacttgc cggggtgcac actagaagcg ctgtcagacc tgtttttacg gcattcaacg
     2701 gttttttaaa agagacatta ttaacacaaa gcagtttcat atatttattg taaaacacgt
     2761 agtcaaattt ttttgacata ttttttatta aaattacaaa aaaatcatga tattattaaa
     2821 tcaacacaca aatcagagag aacgatatgc ttggcgctaa aataattaac gggtttaaaa
     2881 atctcaatat tctttgtatt ggtgatatta tgctggataa attcctttac ggagaggttg
     2941 agcgtatttc gccagaggcg ccggtgccta tatttaaagt tacaaaagaa aaatcaatgc
     3001 ttggcggaac aggtaacgtt attgctaacc ttgcagcttt gggtgttcaa acaatgttta
     3061 tcggtgcagc aggaaacgat gagtcttctg ttatgctgga gcacttcctt gacaaaacag
     3121 gctgcaatta ttctcttatc aagcctgata actaccccac cactacaaaa ataagaatga
     3181 ttgcaagcaa taatcatctt ttgagggctg ataaagaatc atttttaaat gcggatgact
     3241 ctgtattaaa agaactttcc gaaatgcttg aaaaagttgt ggacaaagca gatatcgtgc
     3301 tggtttctga ttataaaaag ggtttgctaa cactgcaatc aacacaaatg attatacaaa
     3361 cctgtaaaaa acatggcaaa aaagtcttgc tcgacccgaa agaaagagat ttttcaaaat
     3421 atgcaggtgc tgatattgtc aaacctaacc ttaaagagtt tgagcttgtt agcggcaaaa
     3481 aatttgatac ttcttctgca actttcaaac aagaaataaa acaagaggct ctggctgtta
     3541 tgaaacagta taatattcac agccttttga ttacacttag caaagacgga atgattttca
     3601 tttcttcaga cagcacaaaa gagcctgtcc atattccggc agaggcaaaa gaggtttttg
     3661 atgtttccgg cgcgggtgat acttctctgg ctgttttagg tgcatcaatc gctgccggtt
     3721 tgtgcattga agatgcaatg aagcttgcaa atcttgcttc gggaattgtt gttggtaagt
     3781 tgggcactgc gtgtgtcagc ccgactgaac ttaaaaatgc gctaataaat aacaattctt
     3841 ccggaaaatt gtcgcaagct ttaaaaataa taggctttga tgaggctgct gaaattgcac
     3901 aagatttgaa aattcaaggg aaagtcaccg gttttactaa cggctgcttt gatgtcatgc
     3961 atcttgggca tattcattct tttgccggcg caaaaaaaga atgcgatgtt ctttttgttg
     4021 gcatcaattc tgatatatca gagcgcaaaa ttaaaggtga aaaatttcct ttacaaaatg
     4081 aaaaaacaag ggcttatgtt gcagcctcgc tggaatttgt agattatgtg gtactttttg
     4141 atgaagagtc tgctctagag cttgttaaaa agataaaacc cgatgtgatt gcaaaagagg
     4201 ggttaaagct ggaaaactgg cccgaagcac aatatgtgct ttcatatggc ggcaaagttg
     4261 ttgagcttga cagggtagag gattattctg ttactgctgt actggataag atagataata
     4321 taaaatctga cggagtttta aatgtataac atagataaag attttgaaac tataagtgaa
     4381 aattttcaaa aaataaaaaa acttacacct gtaattgaaa aggtaagcaa ggcgtgtgtg
     4441 gaagctatga aaaacggtgc aaaggtaatg ttttgcggaa acggcggnnn ctgctgattc
     4501 tcaacacctt gcagcagagc ttgttggtcg ttacaaaatg aacagacctg cactcaattc
     4561 cattgctctg actactgata cttcaatatt aactgctgtc ggcaatgatt ttggctatga
     4621 cactattttt gaaagacagg ttgaaggtct cggaaaaaaa ggcgatgtcc tcattggact
     4681 ttcgacaagc ggcaacagca aaaacgtgct tcttgcaatg caaaaggcaa aatccatggg
     4741 gataacaaca gttgcaatga caggtgaaaa aggcggaaaa atgaaagaac aggcagactt
     4801 tgctattaat gttccgtctg atacaacaaa tcatattcag gaaatgcata tagctgtagg
     4861 ccatattatt tgcggaatta ttgaaaaaga gcttgctcca aaagtcaaag ccctgttttt
     4921 agaccgtgac ggcacaataa atgaagatta cggctatacc tatgaaacag ataaacttga
     4981 ttttattgac gggatatttg atgtgtgtct ggaggctcaa atccgcgggt ataagatttt
     5041 tgtaattaca aatcagtcag gtgttgagcg cgggtattat tctttggaac agatgaatgc
     5101 ctttaactcg catatgaaaa acgaatttgc aaaaaaaggc atcgaaatta cagattttta
     5161 ttgctgtcct tatcttgagc acgaagatag aaagcctttg ccaggcatgt ttttgaaagc
     5221 aaaagaacgt tataatatag atatggcagc atctttggct gttggtgaca aagaaagaga
     5281 cgttgaagct gctctcagcg ccggtgtggg taaatgttat ctttacactc acgaagatga
     5341 tgctgtaacc aaaggcattg ccgttaaaaa gcttacagat ataaaatttt agattttaaa
     5401 aacgctaaat gcaggtgata cagtgtgtgt atacccatac atattatctg agttatcaca
     5461 ataggttttt agctcaggtt gaatggcttt tttctttttg agcagatatc gttctttcat
     5521 caattttttt tgataataat ttgctgtaat atttctggcn ntatcatatt gcacgcaata
     5581 atagatgcgc caacgcttgt tataacgccc agtccgtttt tgaattgttt aaagtttctt
     5641 tgtgcttttt ccagtatttc tatctgttga attttttgtt caggcgtaac aaatttgtca
     5701 aaggcatttt ttattatagt taaatcgttg ttagtgcgtt tctgtgaatc tttattcagc
     5761 ggtgcttgtt ttaagtattc tattgagcct ttgaaaaaat cggttaaatt ttgttttttt
     5821 gatgnnctca attattttgt ttcgtttaag ctcactaaca acaccatcca caaaattgcc
     5881 tactgtagaa ggtacttctc tgttaatatc tcttattgtc ttttccgttg tctgcgtcat
     5941 aattacgctg ttttcggcaa gactgtcgcc aatgtatttt attgcctggc agatggaata
     6001 atacagcccg acattaatta caccgtccgc aatctcttga ggtatgagga attttttttc
     6061 ttttttttca atatctttgt ttgttgcaat cataccaatc tgtgcaacag cagagaaaaa
     6121 ccaccctacc gctccgagat ggataaggga tttgccaaca tcatccccgt attggcccca
     6181 gactttttct attaaatttt gaaaaccgct agcctttggc atctttcacc tccaaaggca
     6241 ttttgtcatc ttctattttt gcttttacac gagatgttag tttttttgtt attatccttg
     6301 ttaaaggtgc atcgataaga aaattggtaa aaatcattgc gaatgttgct ataattgtgc
     6361 ccagcgtttt tacggatttg tcgtatttat caagaaaatc ttgctttttt attggcgttt
     6421 tttcgcaatc aaattttggc agaagaatat ctcttttact ttttcggttt atttgagtaa
     6481 ggtatttggg cccttctttt aaggtataac gcgaaaactg ttttgctgca taaatagaag
     6541 cgtatcttac accgactccg acaattgttc cggcaataat tttccctatg gttcttgcaa
     6601 cggaaacagc tcttgtgtca tcatctgcag ctttgttgtt aaagtctatt aaaggctgca
     6661 ttgccagtgc tgtcgcacct tgaatcagtc tttgttccgg agagtttata tgtttgccca
     6721 caaactcgga ganncttttc tgtgttcggc ttgattacaa tagacattga aagacaaaaa
     6781 gacctttccc ttatacctgt ttatataagt aaggcatgga aaattttttg ctagtattaa
     6841 tgtctaatat taagcaaatt taatattact accatccgcc tataggcata taaatatcat
     6901 tatcatagct tttaggtttt ggtggttcta tcactaccaa ttctttttct gtatcaaata
     6961 tgtagcagct cagtttgtcc tttacgatac aattaatcga aaaatccaga tctttttttg
     7021 taggaacatt ttgtagcggc tcaccccagt ctcttcctct gcctcttata aaagaccatt
     7081 tgtatggaac agtaaggctt ttcattgcag tttcatctct gtctgcaagt gcttgcaagt
     7141 cttttttaac ggaatctccg tattctttgt aaagtctatg tttattattg agtatagctc
     7201 ttcttgcttc ttcagcattc ttattcataa agcagacctc tatatcggca tactgctgtt
     7261 tggttttttc atctttttca agataagggt ataatattac taaattgttg tctgttccca
     7321 catttttata tgctgtttgg gcatatttta ataaggagtt gagtgcacaa acttcattat
     7381 atttcagttg atttttttcg ccaaaagaat caatgtatat tcttccaatt tgtacatccg
     7441 ctttaaaaga ctgttgcttt tggttttgtt tttttatttt gtgtgtgtaa gatgcagtaa
     7501 ttgcgccgac tctcatataa tctaagacct catgttttaa cctgtcttaa atataacata
     7561 atagatatca tttgatatca ggttacatat atggctatat attttgttac acttgtaaaa
     7621 ctactttgca agcataaacc ctgcaaatgt tgcacacagg cctattgcaa aacttgccag
     7681 catataaagc gcacagtgca gaatctttcc gtctcttaaa aaacaaaacg attcacaact
     7741 aaacgtacta aacgttgtca acccgccaag aaaaccgact gtcaaaaaca actttaatgc
     7801 cggagggaac ccttgtgctt tttcaagtgt atagccaaaa atatacccta ttaaaaaaca
     7861 accgataata ttagcgctga aagttcccca gtgtgcaata ccaaaaaatc tgtttgatat
     7921 cattgtaatc agatatctgc aagcagcacc aatgcctccg cctaaaaata ctgccagaat
     7981 atttaacatt taatttacct caattttgtc ttttcttata aaatcaaata agctgcaaat
     8041 agcttctctg tgcgaaaata ttttgtttat acacgaaata tataaaagca tttttataaa
     8101 ccataaatta cttttgctgc cgtagcatag tcgaaataat aaatatttac tctttaaaaa
     8161 ttcaaaatac attttttcac gttttttagg tgatttgtta tgcaagtgta ggatttttgc
     8221 ttcggggtta ataaaaatat cgtagcctga ttttttgatt ctgtattgca gttcagcttc
     8281 ttctgaatac ataaaaaatc tttcatcaaa aagtcctgct ttatcaagag cttcttttcg
     8341 aagcatcaga tcagctcctg taataaaatc tacacttttt aattcattct ttgaattaca
     8401 tccgccatct ttcatttttc tatgacgttt tggaaaaaag tatcgtaaat tgaatgtttt
     8461 taaaaataaa tccgtcaaat caaaaatatt tccatatgag tgaatatttt gtccttgttc
     8521 atcatacagg ttgccgccac aggctcctgt ttttggattt gcttccataa aatcaaagag
     8581 aattttaaca gcattgttga ttaaaattgt atctgtattg agcaaaaatg catattttgc
     8641 atcaaacacc ctcaaggcga tattgtttcc tgctccaaaa cctttgtttt cattgctttg
     8701 cagaaatttt atcccgggaa attcctgttt taaaagttct tctattccat cgtcagagcc
     8761 gttgtcaaca acgtagatat caaaatttac gtcatgagtt ttttcgtaaa ttgactcaat
     8821 acactgtttt gctaaatctt ttgtcttgta attaacaaga atgattgata tgtcttttgc
     8881 cataatgctc taaattttgt accacaccat caaaataata tcacaaatgt gaaaattaag
     8941 ttttgtataa attttaaacc atatttttac atgaccggca aaaaaaatgt tattagtgtt
     9001 ttatagcatt caaagcttac tttttgccag atgtttatta atagggagaa gagatgaaaa
     9061 ttaacagaat aaataacctt aattccgtat attactcaaa aaataatgca aagtccgaac
     9121 actccggctc tgtgaaatat gaatcaaact caaatgtatt gtctcaccag ctaaattctc
     9181 ttgcatatgc caataaatat atgacagctt tgagtttcaa aggggctttg gattcggaag
     9241 agaaaaattt caaactaaac ctcaactttg atgagctaaa aagaagaacc tctcctgaca
     9301 actttgctgc ttacactctt atagatgaat ccaacgatgc atacaaaaag ctttctcaag
     9361 gcgataagac agctcttaaa catcttgtta aagcagctaa aatactggaa gaagtctatt
     9421 tgatgcagga taatccccat aacattgagt ttaaaaatta tctggaagaa caaacactaa
     9481 aaggcaatga gcaggcaagg cttactttac aattgtttaa cgcacaaaaa ggaattaatg
     9541 caaaagatat tgaaggcggc agcgtaaacc ttgcacgtgg gattgaaccc aagctgcagc
     9601 gcggttttta cccagaagat ttaacagaag acgaatttca caatatcctg attttaatga
     9661 ttaaaaaaaa taaaatatca gaggtgaaaa aaatactaaa ccagagaaca atggtggaaa
     9721 gagacggcaa atatcttaaa gcaacggatt atacagacta ttttaaagag cagtttgtca
     9781 atgccgcaac agagcttgag cttgccgcac tcacttcgtc aaacgatgat ttcaaccgct
     9841 atttgatttt gcaagccaat gctctaatga tgaacaatcc ttatatggat gctcttgcgg
     9901 ataaaaaatg ggcaaaactc caggatacac cattggaatt tacaataaca agagaatcct
     9961 atgatgatag aatgacccct tctgtgaata aaaacaaaaa gctttcggca atgctcaaaa
    10021 aacttggaat tactccatat gccaaagaca acatcggtgt tcgcgtaggt attgttaata
    10081 aagaaggcac ggagtatttg ttaaaaataa aggattatat gcctttaatg gctgataata
    10141 tgccttttaa agaggaatat gaacaaaata tcactcaaaa cgataataaa caaacaatgg
    10201 tagatgttga gatggtcgat atgaccggtc aactgggcgc atatcgcggg gctatttcac
    10261 tggcatcaaa tctgccaaac aatgacaaac tgtccgtgat atcaggcggt ggaaagcgta
    10321 atgtctatca tatccaaatg cgagaagcaa aatatgctga taatataaca aaaaaactgg
    10381 atgccattct taataaaagt cagcataaat attttgacac acaggctttg cacgatttta
    10441 ccattttgca tgaaaatgtt cactcactgg ggcccaaaaa cggaaccgaa aaacttggta
    10501 tttacaaaaa tacaatagaa gaaaataaag cagatatggg cgcacttgtt atgctcgatg
    10561 tactgacaaa aaatggtttt tatacccccc tgcaacaaaa gaaactactg gtttcttatt
    10621 tcagtgcata tgtccaaaaa ggacctgact ttagcaatgc tcacaggctc agaaacataa
    10681 tgcagaacaa tttctttatt aaagaaggtg ccctcagtgt tgacgacaat ggcataatga
    10741 cagtaaattt tgaaaaagtt acacctgctg caaataaaat gctgaaacag ataatcagac
    10801 tccagctgga cggtactcaa aaagatgcac aggagtatat taaacaaaac gctgtatggt
    10861 ctgatgagct cgacaaaata gcgcataata taaaacaggc agatagtact ttaaacgcaa
    10921 ggattgtttc tccacttgcc gataagctgg ctgttcaata aaactttata ttatctttat
    10981 aaaaaaacct taatttaaag tggattttgc gctatacttg gcgtgttaaa aagaacacat
    11041 atgaacacag agggaaaaac atgttattag gcgtaaatat agaccatata nntatagcga
    11101 cattgagaaa tgcaagaggc ggtttggaac cgaacttgat tcaggctgct atactttgcg
    11161 aaaaagccgg tgctgacggc ataaccgtac atttaagaga ggatagacgc cacacccgcg
    11221 acaatgatgt tattgagtta aaagatattc tcaaaacaag attgaacctt gaaatggcgc
    11281 tgactgacga aatgcaaaaa attgctcttg acgttaaacc tgaaaacgtt tgtcttgttc
    11341 ctgaaaaacg tcaggaagtt acaacagaag gcgggcttga tgttgcgtcg agagtggagt
    11401 ttgtaacaga ttttgtaaaa ccgcttgtgg atgcaggaat aattgtaagc ctctttattg
    11461 atgctgataa agaacaggtg gaagctgctg caaaaacagg agctcaattt attgagcttc
    11521 ataccggaag atactctgaa gcctggggta caccattaga ggacaaagag cttaaccatc
    11581 tcaaagaagg ggctgctctg gccgcaaaac tcgggttgaa agttaatgcc ggccacgggc
    11641 tgacatatga aaatgtccat agaatgcacg aaattccgga acttatagag cttaatatcg
    11701 gtcataatat tatagccaga gcagtgttcg acggtttgga aaaagctgta aaagatatga
    11761 aagatttgat tgtttaagat ttttgttaag aattttcaat ccgtacttga tattacactg
    11821 tgtttacagt agggtaaaat aagaaactaa tctttgaaag gaatatagaa atggcaaaac
    11881 aatgcgcagt atgcggcaaa acaagactta aagcagctaa aatttctttt tcacataaac
    11941 aacatgtgca cagacaagaa gttaaccttc aatctgtaaa agttaaccaa aacggcactg
    12001 taaaaagaat tgacgtttgc acatcttgca tcagagcagg taaagtgcaa agagctgtat
    12061 aagcttaaaa gaaaactaaa aagaagcctc ttattaatta agaggcttct ttttttatgc
    12121 ttcgaatgat tttaagtctt ttttcatacc ttcttccatt gcttttttag cttcttgcat
    12181 ctgctctttt ttcatttctt cctggatctt cattaattga gcttttgttt cggaattgtc
    12241 tgcttttttt gcttttggtg cttgattctc ggtatttgta taattgctct cagatggtgc
    12301 cataggtata tctnnnnnnn agggccttgt gtgggggctg tttcaggatt cagtattttt
    12361 tgttgtgcaa ttggatctat aggcatatct tttctccttc gtttctaaca ctaatgtgta
    12421 tatcggtttt gtaagggtaa atcttaatag ctttttaaat aaaatttaca attgttaata
    12481 aatttcacct atctgtccga tagcccgatt tctttttgta ctatcataaa attataaaat
    12541 tgtttgtaat tttcattgca aagtgatata ttacaagaag aaatcacgga tagaaagagg
    12601 atacatactg tgtcagaagg tcattggatt gcacatctag gtcagtttaa cgtaaacgtg
    12661 gatacagttg ttacgatgtg gataacaatg ggaatcctta ttgtttttgc ctttctcgca
    12721 acacgtaaaa tgtctattat tccgacaaaa ctccaggcag tagcagaagg aatactgggc
    12781 gcttttgttg gcttgaccga ttctatgata ggtaaaaacg ggcgcaaaca catacctctt
    12841 cttgcaactt tattcctgtt tattttaaca gccaaccttc tgggccagct gccgtggcgt
    12901 ttgtatcatt taaaaaccgg tgagcttgct tctccgacaa atgatatcaa tatgacagcc
    12961 gcaatggcca taatggtttt gatatattac gtttatcagg gcgtaaaagt taaagggctc
    13021 aagtactttt tacacgagtt cagcgcggta ggtataataa tggcgttgat tgagctttta
    13081 gaaatggttg taagaccttt ctcactggct ctccgtcttt ttgccaacat actggcaggc
    13141 gagcttttga tagttacttt tgtcggactt tgtgcttatc ttttacctct tccgtttatg
    13201 ctttttgagg tatttgttgc atttgtccag gctcttgtat ttatgctgct gtccacggct
    13261 tacatagcaa tggctgcgca ggaagaagaa cattaattat aaaataacca gaattagtaa
    13321 ataaaaaagg agaaaattat ggcagtagaa caagtagcag ttgaagttgc atcaatggct
    13381 aaattaggtg caggtattgc aatcggtttt ggtgcaatcg gtgccggaat aggtttgggt
    13441 attgcaacaa aaggtctttt ggatgctgta tcaagacagc ctgaaattgc aggtaaagca
    13501 ttgatttact tcattatcgg tgcaggtctt gcagaagctt gtgctatcta tgcattattc
    13561 atagctttgc aattacttgg ttagtagtaa aaaataagaa tttgtattat ggaaattaac
    13621 gcaactatat tagtatcagc aatcagtttt atcgtattca tttttataat gaacaaaatt
    13681 ttgtacaaac ccgtgcttga aatcatggaa aaaagacaaa attatattga cgcaaataaa
    13741 aatgaagctg atgaacatca taaaaaagca caacaacttc tggtagacaa agacgccaga
    13801 gtcgctgaag cacaaagaac ttcgcgtgat atagttgcgt caaaagccga tgcaatcaaa
    13861 gaagaaaaat ctaaagtact aaatgacaca aaagacagtg tcaccagcta ctttagcgaa
    13921 caaaaacaaa accttgctca ccagaaggat gaagcagcag ctaatatgaa atacgatgtt
    13981 gcagatcttg caaaccgtct caccacaaaa cttatgggag aaggcattgc attcgaacct
    14041 gtaggtgaac aggaagtgga agaggtaatg aagaaaaatg cttgatttta gcttctctaa
    14101 catattacat tcaaacgtta ttaactttgc tataatgatt gctttgtttg cttttattgc
    14161 atacaaattg aaagtagggc aaaaaataga agatatgaca gcttctataa aaagcaaagt
    14221 ggaagagtct gatgcaatca aagaagaggc taaaaaagat tttcaaaaca ttgctgattc
    14281 acttgaacac atagaagacg aattaaaagc tattgtcgat aaagctgaac aaacggcaaa
    14341 atcttttgaa caaaaagcaa gagaagacct cgataaatct gtagctttgc ttaaacaaaa
    14401 tattgaaaag caaattgaaa cagaacaaaa ccacataaaa ggcgagcttc ttaacaatgt
    14461 tgcttcctct tcaatagaaa ttgctcaaag acagattaaa acagcactgg acaaagacaa
    14521 acagctgcac agaaagtata tagaagactt tattaacagc attgataaag cagatgtata
    14581 acggataaga aaaatgacgt caaaaaccat agataacaaa ttaataccac ttgcaaaaag
    14641 atactctgat gctttgagcg aagtagcaaa aagcaaaaat gagcttgata acgtcaaaaa
    14701 tgacttgcag accgtgtgtg aggcaatgga ctctgttgcc gaacttgcaa attttcttgc
    14761 tcatccagtt attccgctta cggaaaaaaa ggagatggta aagtctgtat tcgaaggtaa
    14821 aatcaataac gacgtattaa accttatctt tatactgctt gaaaaaaata aaataaatct
    14881 tctcggcgcg attctttatt gttttgaaga atcaatggac gaagctaata atatactcaa
    14941 agttggtgtt gtatctgctg ttgaggtgga tgaagactta aaacaaagat tgaaannnnn
    15001 nnnnnnnnnn nnnnnnnnnn aaagtctgtg aagtttgagt ttgatataaa tcccgaaatc
    15061 attgcagggc ttgtgttaaa aattcaagac aaaaccatag acggttcaat ggctgcaaaa
    15121 ctcgaaggat ttaaaaaagt attaagatag aaagtacaat caataaagga aagtaaaatg
    15181 gcaacaataa gaccggatga aattacttct ataatcaaag ccaaaattga aaattacgct
    15241 tccgaaatgg aagtttcaaa tattggctct gtactggaag tcggtgatgg tattgcccgt
    15301 gtctacggct tgcgcaatgc aatgtcaaac gagcttgtcg aatttgaaga cggcaaaggc
    15361 acactgggta ttactcttaa ccttgaagaa gacaatgtag gtgttgttat ccttggtgaa
    15421 tatcagcata ttaaagaagg tatgactgta aaaactactg gcagaatcgc ttctgtaccg
    15481 gtaggtgatg gtcttatcgg aagaatcgtt aacccgacag gtaaaccagt tgacggcaaa
    15541 ggcgatatcc actacgaaaa aacaagacct gtagaaagag ttgctccggg tattgtttct
    15601 agaaaatctg ttcaccagcc gctgcaaact ggtttgactg cgattgatgc tctgacacct
    15661 atcggacgtg gtcagcgtga gttgattatc ggcgacagac aaacaggtaa aactgctatt
    15721 gcaatcgata caatcatcaa ccagaagggc caggatgtca tttgtgttta cgttgcaatc
    15781 ggacaaaaaa cttctaccgt tgcacaactt gccaaaaaac tggaagactt tggtgcaatg
    15841 gattacacaa tcattgtttc agctacagct gatgagtctg ctcctttgca gtttattgca
    15901 ccgtttgcgg gtgtagcaat tgctgaagaa tttatggaac agggcaaaca cgttcttatt
    15961 gtttacgatg atttgacaaa acacgcacag gcttatcgtg caatgagctt gctgttgaga
    16021 agaccaccgg gacgtgaagc ttaccccggg gatgtattct acctccactc aagacttctt
    16081 gaaagagctt gcaaattgag cgacaaatta ggcggcggtt ctattactgc attgcctatc
    16141 atcgaaactc aagccggtga cgtttcagct tatattccga caaacgtaat ttctattacg
    16201 gacggtcaaa tattcttaga aacaggcttg tttaactccg gtatcagacc tgcaatcaac
    16261 gccggtatat ctgtatctcg tgtaggcggt gccgctcaaa ctaaagctac aaaacaggtc
    16321 ggcggtaaat tgagacttga ccttgctcag tttagagaat tggaagcttt tgcccagttt
    16381 gcttctgacc ttgacaaggc tactcaagac cagttgaaaa gaggtcaaaa attaacagaa
    16441 gtgttaaaac agcctcaata ttcacctttg agcgttgcta aacaggtaag catcctgttt
    16501 gctgcaaacg aaggtatact cgatgatatc gataacaaga atattcaaaa attcaaaaaa
    16561 gaatggtttg aatactttga tgccaatatg tctgatcttg ctcaaagact caacgatggt
    16621 gctgctttga gtgatgaaga caaaaaagct ctcaaagaaa acctggaaac tttcaaatca
    16681 tctttattta attaaaggaa aatccatgcc aaatttatta gacataaaag acagaatctc
    16741 aagtatacaa aatacaaaaa aaatcactaa agctatgaaa atggttgcgg ctgcaaaggt
    16801 gaaaaaatca cagattaaag taatctctgc ccgtccgttt tcaagggctc ttggtgaagc
    16861 atttgcaaag gtgcttgcca gtactgaagg gttctcgtct aacggtctaa aaattgaaag
    16921 agcaatagac aactatcctg tacttatgca aaaaagagaa caaaaaaccg caggtatcct
    16981 tgttgttact tcaaataaag ggcttgccgg tgcttataac gcaaacgtta taaggttcac
    17041 tttaaagagg atacaggaat ataaagaaaa aggcatagat tctaaactct ttattgtcgg
    17101 tacaaaaggt gttgcttctt taaaaagaag agcacaggaa cagggctttg agatagtgca
    17161 ggcttataca aaaatttctc aggagccttc ttcttcaaac gctattgtaa ttgcagaaga
    17221 tatggctcag gcctttgttg acaacaaaat tgacagtata gaaattatta ctacccgctt
    17281 taaaaatatg atgtcataca aggttgagga ttggaaaatt cttcctgttg atgatgttga
    17341 aaaagcactg ggtgataaac atacggaatc acactcaata gacccgctta tggcatttga
    17401 gccagattct gaccacattt tgcaaaaaat tgttcccatg tttattacaa acattatcta
    17461 tcaagcgttg ttggaagcgg ttgcaagcga gcttgctgca agaatgactg ccatgtcttc
    17521 tgctacaaac aatgctgatg aaatgataag actgctcaca atcgattaca acaaggctcg
    17581 tcaggctgct attacacagg aaatttcaga ggttgtatca ggtgcagatg ccttgaaaaa
    17641 ctagtacaaa ttggtataca atacactagg tacattacag gtaatgaatt atgggttata
    17701 aaattttaag aaaaaaagag ttatgcgcaa atcagtatga attaacaatt catgcacctt
    17761 atattacaaa aaatgctcaa gcagggcagt ttataattct aagggtttca aaagacggtg
    17821 aaagagtgcc tttgacgata gctgactatg acagagaaaa aggcgaactc actattgttt
    17881 ttatggctgt tggttataca acaaaacagc ttgctacgct cgaagtcggc gatgaacttg
    17941 ttgatatcgt cggtcctttg ggacagccca ctcatattga aaagtatggc actgttgtct
    18001 gtctggcagg cggctacggt gcagctccgt gctacttgat tgcaaaagct tttaaagagg
    18061 ccggaaacaa agtttatatg attatgggtg caagaacaaa agatttaatt ttctggcagg
    18121 ataaaatgaa agatgcctgc acagagcttt ttataacaac tgatgacgga agccttggaa
    18181 caaagggctt tgtaacaggt gttatggaag atattatgaa taaagaaaaa gttgattatg
    18241 caattgctgt tggcccgatg cctatgatga gagctgttgc agaattaaca agaggaaaag
    18301 gtatcaaaac agaagccagc atgaacccga ttatggtaga cggtacgggt atgtgcggtg
    18361 cgtgccgtgt tactgttggc ggggaagtta aatttgcctg tgtggacgga ccagattttg
    18421 atgctcatca aatcgatttt gacgaagtta ttaatcgtac caaaatatac aaagactatg
    18481 aaaaaaaacg cagcgaaaac tgcaatttat acaaacaggc agaatcactt aaataatcag
    18541 gagaacgtag aatggcttta atacctattt gtccgttaat gagtgcgggt aacgatatag
    18601 aaatagtttg tgcacaggaa aaatgtgcat ggtatcttaa aaactacaaa acttgttctg
    18661 tatatctatt ggcacacaat gccgcgctgg acataaaaca aaaacagtca caaatgacat
    18721 ccaaataaca aaaaagagct ttttaaagct ctttttttta aatatttttt nnnnnnnnnn
    18781 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
    18841 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnagatt gttagattcg ctttcagttt
    18901 catacagttt taaaagattg tctatttgtg aagccagctc ttttgttaat tttcccgact
    18961 cctcatcatc ttttgctact gcattgtaag gaatttgcgg ataagctcct attgtttgca
    19021 ttatttcttt ttcttcttgc gtgtattctt caggtttttt gtacgttttg taaatatcgt
    19081 ttaattttgc tttgtttgaa tcgtcaataa cagcgccttc ttcatttgct tttgtataaa
    19141 ttgattttgc aaatgcagct gttctttcag cttcttgttt aacttgagca gcttcttttt
    19201 cctgtttgta tttttcggct tgctcttgtt gttgtttgtt atatatttca accgaattca
    19261 taaaatcttg taccgaaata tttgacggat ttaatgtttt ataatttccg cttgtttgtg
    19321 gcgattgtat gtactgattt gctttatttg catattgagc catcattatt gtgttggcag
    19381 agctcatgag gtttgtcata cttgaaaaga gcactccttg catatcccag aggttgcctc
    19441 cgttgtattg ccaaggtctg aaaagaaatg gcataactgt attgagcgcg cctgctccta
    19501 tcatcatacc catatttatt tttgaccaca gattatttct ctttgcgctt tttgttgcac
    19561 ccttgtaatc tgtgttgccg tgcaatgctt gttgaagacg ctgttcacgt tgttgttcgt
    19621 tatattttgc tgcaatttct tcttcaagtt cctgactttt ttcatcgaag ccgtcaacag
    19681 gagctttacc gtttttgaca ctaaatatgt aatcagagct tgcctgtatt tcttcatcgg
    19741 taaagatgtt ttggtttttg cctatttcaa catctgtacc aatatcaagc aatccgtttt
    19801 tatccttgtc tgcaatttct agtgtgacat cttttccgtc tttgcctttt ttggataaaa
    19861 tccagcctgt ctctgttggt ctaatctgta tagtggtagt atctgccatt gtttcctcaa
    19921 tgattattac tctctatata tttataaagt atatacagag taaataattg catgttttta
    19981 acacaattgt taacaactgt taacaattat gccagaggaa gttttatgat tacactaaaa
    20041 acattgtctt tggtagattc aagctcaatt gctccattca ttgcaagcac cagacctttt
    20101 acaataaaca agcccagccc tgttcctcgt gttgttcttg tggttttgtc atcaatcctt
    20161 gtgaatttgc caaagagttt ttggagctta tcgtgcggaa tatagtcata agagtttgat
    20221 atttttacaa tggcgtgatt tttttctata tttacattta tctgtattgc agtattttca
    20281 taggaatatt tgtatgcgtt ttcaacaagg ttgataaata cctgctccag tctgtctgtg
    20341 tcagctatta cctccggtat attgtcgggt atattaacaa taatctcgcg ttgagcttta
    20401 tgttttgttg aaagtattgc atcgtttaga gaatcttcga gattaacttc ttgcagaatt
    20461 aaattgagtt ttgccccttc tatgtcggga atgacaagga gatcttccac cattctgctt
    20521 aaacgttcgg attgattttt gatgattttt aatgattttt ggatagtttc ttcatccagt
    20581 tcaatgtctt gtctcaatag ccttgaagtg taacctttaa tgcttgttaa aggggtgcga
    20641 aactcgtggc ttacggtgtc aataaggtta gagcggaatt catccagttt tttaagttct
    20701 ctgttagaat gttttagctg cctgtaggtg ttgttgattt cgtcagccat tttgttgaat
    20761 tcttgagcaa ggaacacagt ttcatgaggt gtaaaaacac ttgttaatag tcttactttt
    20821 cttttgtagt ttccttttga tagggccatt atccctttta tcaactgtct aatgtttatg
    20881 taaaggtaat atgtgtaaag cccgacaacg aatatgataa ataatgctga tacacaaaga
    20941 gcgagtataa tttttgagcg agcggtgttg attgttgttt ttgtaatatg gtgtgtttgt
    21001 gacgctgttt tcagatcagt atattccaat accacaaata gtaa
//
LOCUS       DABS01000036            9831 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_3046, whole genome shotgun sequence.
ACCESSION   DABS01000036 DABS01000000
VERSION     DABS01000036.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 9831)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 9831)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9831
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..350)
                     /locus_tag="CPT85_01395"
     CDS             complement(<1..350)
                     /locus_tag="CPT85_01395"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26492.1"
                     /translation="MLINKLTSTFGDHSNLIPLFTKDVVNSTGMTAFSYDAGGKIEAK
                     DRFIDEFGTQAIWMGGLPFFKMAFDKSIYKLAKLSPDVDVRLLKDKEQLNAAQKYAET
                     LKNTNVAETLNDVV"
     gene            911..1927
                     /locus_tag="CPT85_01400"
     CDS             911..1927
                     /locus_tag="CPT85_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011940522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="DAB26503.1"
                     /translation="MKVYMDSDIDKNKILNKKVAVIGYGSQGYGQSTNLKDSGVDVVI
                     GARVGGASAKKAQAEGLKVMSIEDAVKWADLIQILIPDEVQAKVYEEQIKPNLRAGQY
                     LMFAHGFNIHFKKIVPPADVNVLMVAPKGPGHTVRSEYVAGKGVPSLIAVYQDPSGDS
                     KEVALAYASAIGAGRAGIYETSFKEETETDLFGEQAVLCGGLSALITAGFEVLVEAGY
                     SPYMAYFECLHEMKLIVDLVNQGGISDMRYSISNTAEWGDLTIGPRIITSAVKEEMKQ
                     VLKEIQEGKFAKEWLDEYNSGMKKFRSLEQKGEEHQIEVVGRELRSKFAWKDNDKIIN
                     RDKN"
     gene            2162..3196
                     /locus_tag="CPT85_01405"
     CDS             2162..3196
                     /locus_tag="CPT85_01405"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26493.1"
                     /translation="MGMAASQARYLSLTARKTNVEYEGQQVNQERTALANQSAGLFNQ
                     MLALEVPTPPSASDYSKTQYVFTDNQTTQKYTIDSIYKNPTPDENGDYKYTVSAYKNT
                     TDILANRSSIVSQGQGTNRYTIAEDPSNPGTYTIQIGNNTAKTLIAPKQYTALTSKFQ
                     EADQKTNGGQDNITDDTYYFKFVDGNTEYYIPAASGEETFEQLMERGLASGSLPMYSA
                     QSTAKSEYVTYNDAVMELAGDGTGRFKSITFTNENGNQVRCDLTQQTVQDDDAYDAAM
                     ETYTAKKSIYEKAVADINAQTTIIQQQDKTLELHLDQLDTEQQAIQTEMDAVKKVIDK
                     NIEETFKTFA"
     assembly_gap    3526..3599
                     /estimated_length=74
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <3600..4425
                     /locus_tag="CPT85_01410"
     CDS             <3600..4425
                     /locus_tag="CPT85_01410"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26494.1"
                     /translation="PTQTDYYSDNYTYSDSSATADGKVTISNIAENEGSDPPTYTVDI
                     SYNVDAMQYQAQNNQQVYTTKNDDGTYELHFKDGTSKTIKKVEGNLSETLVNEMNKAG
                     GTTENHVDDEYYTYTNTANNATYYINATASKFDPEKTNTQQTVNLYSQIKTTESVSEQ
                     LKNVTMTKTSDGTYTKMTWTDENGVVQNRNLSAGRDYDSDAYDQAMQQYNIDKANYDK
                     EIADINAKTEELQQTDRTLELRLKQLDTEQEALQTELDSVKKVIDKNVDNIFKTFQ"
     gene            4456..5286
                     /locus_tag="CPT85_01415"
     CDS             4456..5286
                     /locus_tag="CPT85_01415"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26495.1"
                     /translation="MSYKNDGYLVIANKFGKASSDAKAQLFETYDRLRDLTVSGSSLD
                     GAGFGTAGSFLWQIARLISPSAFMPVLGGNTSMNIPGTSYWSPISGGNSILDSGSAAF
                     GVTGLGNYPGFPSGAAPIAWGFGMDTSYDTSGTITGGASSLYSASSIGGSVGLNAAAY
                     GAGVATGFGVPGTSWVLPTAGVVSGFAGVVQAMAPYMGSFGLGATVLGNLLQGTSSAG
                     LAAYQNISGSILSNADTILSNKVRNIETVVKMLDTQGDIVKKMLKDSIEGDSKQVQNM
                     "
     gene            5300..5524
                     /locus_tag="CPT85_01420"
     CDS             5300..5524
                     /locus_tag="CPT85_01420"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26496.1"
                     /translation="MNQRTYIRAVNTAILDRCFILSVLKKIVTFYYNSFVFHPNIFKN
                     YEKVPNNTTEHKNCLAFLKAVDSANINFIY"
     gene            5614..5886
                     /locus_tag="CPT85_01425"
     CDS             5614..5886
                     /locus_tag="CPT85_01425"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26497.1"
                     /translation="MFQDALMTNLQKIVNFFGYLVSYFKRHNPLLEFGNQIMAMVKDY
                     LTMNRKLKMAKYRVNYQMYKLNQMEQLIAENNEHVFLRGNKLNLQR"
     gene            5913..6236
                     /locus_tag="CPT85_01430"
     CDS             5913..6236
                     /locus_tag="CPT85_01430"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26498.1"
                     /translation="MGMATSQLRLMYLNAYRLDLEYKIQLITEAKMNLSKTCTDLLNV
                     GTDLDADDPMVKKLEARKERLNVMEKKLDMQMQQYQNKLKMIDTEYSSCENLLQKNID
                     RSFKY"
     gene            complement(6266..6961)
                     /locus_tag="CPT85_01435"
     CDS             complement(6266..6961)
                     /locus_tag="CPT85_01435"
                     /inference="COORDINATES: protein motif:HMM:PF00089.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26499.1"
                     /translation="MRKFVVTALSLAVMMGTSVQMGYCGILDGNRYDEDTTISQIYEK
                     MSPAIVLIEADVKEGISSGTGCIIDPKGIILTSSHVVTEAPSIQVTISTGEVFKGEIL
                     SVMGKDNDLALIKINAKKPLPVIELGDSEKVKVGQKVLAIGNPFGFNGTLTTGIVSRI
                     DYTKNKIQTDAAINPGNSGGPIINIHGEVIGISQSIYNPDNNISNIGIGFAVPINEAK
                     NFIKLSMSNSKTX"
     assembly_gap    6269..6270
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7161..8582
                     /locus_tag="CPT85_01440"
     CDS             7161..8582
                     /locus_tag="CPT85_01440"
                     /inference="COORDINATES: protein motif:HMM:PF01565.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcD"
                     /protein_id="DAB26500.1"
                     /translation="MITQEKAVIKEFAQFDESIIKAVQKIAGKDNVISDIEGLYAYSF
                     DCAHIPFSKEYPRLVVFPQNTQQVSDIVKLANKNRIPIIERGAASNHAGGCSPVRGGI
                     ILHFSKMNQILEINNSDLTCKVQPGVVVGDLQKEALKKGLFFPPDPSNLAVSTIGGGI
                     ALSSGGPRAFKYGTFKDYVLDLEVVLADGTILRTGAPTVKNVTGYNLTQLIVGSEGTL
                     AVITEATLRLIPAPETTNVLLAYFESIEKAVDAVSAIINNHLTPSVVDLIDKKTVQTI
                     ENFYPTGLLCDKEAVLLIEIDGDSASVAHQQEKIIELCRNNGAQNIDCAKDEKHRQKI
                     WTARRSAFGACAQLAPNVITEDVVVPRSKIAALSKGILDISRKYNLITMVMGHIGDGN
                     IHPNFALDLRDKKQKENFEKAKAELFRLAVKLGGTLSGEHGIGCQKANFLPIALDKTA
                     LNIMIQLKRVFDPNYILNPDKML"
     gene            8620..8934
                     /locus_tag="CPT85_01445"
     CDS             8620..8934
                     /locus_tag="CPT85_01445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013703812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="DAB26501.1"
                     /translation="MNNCVIYCTVPNEFNANLIATTLIEENIAACVNMLPSVTSIYKW
                     ENIVQTDNEMLLIIKTREEKFEEAEKKIKELHEYSVPEIIALPIIKGSEEYQRWIVKE
                     TE"
     gene            8931..9767
                     /locus_tag="CPT85_01450"
     CDS             8931..9767
                     /locus_tag="CPT85_01450"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26502.1"
                     /translation="MTEITTDKEQEYCLTFNAMTKFLRSLGLTVKTNTKARGHQGFFL
                     KNRIDISASIPYKRKIEVLIHEFTHYIHAKIDPEVFKNHGTLESLFPGADIKKIQTEM
                     LAVTRFVDTNKSFNILNARRNEILEQIKQTDKKIKSIYPDFKRSYAYPKFEKTIKKTD
                     AKYLLKYDKVRVKTMFTGKTKDYSIKTVEEDFPQFEESVHQYIRLKSQQRALKRVASR
                     ISRLNSYYNRPTELFARFVEGLFIDTNMVSEIAPYTYLVFCKELAMNRYLELADFINK
                     FF"
BASE COUNT         3450 a         1687 c         1786 g         2832 t
ORIGIN      
        1 tttactacat catttaaagt ttctgcaacg tttgtatttt ttaatgtctc agcgtatttt
       61 tgcgcagcat ttaattgttc tttgtctttt aagagtctta catcgacatc aggacttaat
      121 ttagccaatt tgtaaatcga tttatcaaaa gccattttaa agaacgggag gccgcccatc
      181 caaatagcct gtgtgccgaa ttcatctata aatctgtctt ttgcttctat tttgccaccg
      241 gcatcataag aaaatgctgt cataccggtg ctgtttacta cgtcttttgt aaacaggggg
      301 attaaatttg agtgatcgcc aaaagttgaa gttagtttat taattaacat ttaaaattcc
      361 tttacacgcg gggttcggtg tattataaac cccataccaa gttcataact aatacaattt
      421 ttccgtttgt tcttgattgt gtatttcgtc ggttattaaa catttaagat ttctccttga
      481 tatagtttag ttttttaaag tttgtgaata atattttgtg ctaaattttc ctgcattttt
      541 tatattttgt aacatatttt gctaaatttt agagacaaaa aagccttccg aattttttca
      601 gaagacttta caaaatccgc tctatgctca tgcagcaaag ctgcaatctt ttcaaaattt
      661 agtaaagact tctaattagt gtaaaattgt cgtttttgat actttcttat tctcataact
      721 aatttttcta acctgttaca tataaaaatg ttaacactac acttattaat acataaaaat
      781 attttgatgt ctagtcttta ttacaaaagt agaagaaaaa ctcaactatt tgttggactg
      841 ctaaacaata tgtgatagaa tacttgaaaa gaggtgttac actaataagg agaagagaat
      901 ggcacacgaa ttgaaagttt acatggattc tgatattgat aaaaacaaaa tcctcaataa
      961 aaaagtagct gtaatcggtt atggttcaca gggttacgga caatcaacaa accttaaaga
     1021 cagcggcgtt gatgtagtaa ttggtgccag agttggcggt gcttctgcaa aaaaagcgca
     1081 agcagaaggt ttgaaagtta tgagcatcga agatgccgta aaatgggcag atttaatcca
     1141 aattcttata ccggacgaag ttcaggctaa agtttatgaa gaacaaatta aacctaactt
     1201 aagagcagga cagtacttaa tgtttgcgca cggttttaat attcacttta aaaaaattgt
     1261 tccgccagca gatgtaaacg ttcttatggt tgcaccaaaa ggcccgggac acactgttag
     1321 aagcgaatac gttgcaggca aaggcgttcc ttctcttatt gctgtttatc aggatccttc
     1381 aggagattca aaagaagttg cactggctta tgcatctgct attggtgcag gcagagctgg
     1441 tatttatgaa acttctttta aagaagaaac tgaaacagac ttgtttggtg aacaggcagt
     1501 tctttgcggt ggtttatcag cattgattac tgctggtttt gaagtacttg ttgaagcagg
     1561 ttactcacct tatatggcat attttgaatg cttgcacgaa atgaaattaa tcgttgatct
     1621 tgttaaccag ggcggtattt cagatatgag atattcaatt tctaacacag cagaatgggg
     1681 cgatttaaca ataggaccaa gaattattac ttctgcagtt aaagaagaaa tgaaacaggt
     1741 tcttaaagaa atccaagaag gtaaatttgc taaagaatgg cttgatgaat acaattcagg
     1801 aatgaaaaaa ttcagaagcc ttgaacaaaa aggtgaagaa caccagattg aagttgttgg
     1861 aagagaattg cgttccaaat ttgcttggaa agacaatgat aaaatcatca acagagacaa
     1921 aaactaacgc aaacactaac gttttatata gtcaaaaaga gcgaagtttt aaaagcttcg
     1981 ctcttttttt gtgcaaattt tgacttttta ttagatatta ttaaactcta atcgcaggtt
     2041 agtaagggct ttttaagcca tttgtaaata atttgtaaca tttgaacata aattactaaa
     2101 gttttagcaa ctgtatgccg attaataaaa cagatatgca aaaacaaaag gagtattagc
     2161 aatgggaatg gcagcttctc aagccagata tttaagttta acggcaagaa aaacaaacgt
     2221 tgaatatgaa ggccaacagg taaaccagga aagaacagca ctggcaaacc aaagtgccgg
     2281 cttgtttaac caaatgcttg ctttagaggt tcctactcct ccttctgcaa gtgattattc
     2341 aaaaactcaa tacgtattta ctgacaatca aacaactcaa aaatatacaa ttgacagtat
     2401 ctacaaaaat cccacaccgg atgaaaacgg agactataaa tacactgttt ctgcatacaa
     2461 aaatacaaca gatattcttg caaacagatc ttcaatcgtt tcacaaggtc agggcactaa
     2521 cagatataca attgcagaag acccttcaaa ccccggtaca tataccattc agattggtaa
     2581 taatactgca aagactctta ttgccccaaa acaatataca gctttgactt ctaaattcca
     2641 agaagctgat caaaaaacaa acggcggtca ggataatatt actgatgata catactattt
     2701 caaatttgta gatggaaata cagaatacta tattcctgca gcaagcggcg aagaaacttt
     2761 tgaacaactt atggaaagag gacttgcatc aggttcttta cctatgtact ctgcacaaag
     2821 cactgctaaa tctgaatacg taacatacaa cgatgctgta atggaattgg caggtgacgg
     2881 taccggcaga tttaagtcta ttactttcac aaatgaaaac ggcaaccagg tacgctgcga
     2941 tttaacacaa caaactgtac aagatgatga tgcttacgac gcagcaatgg aaacttacac
     3001 agccaaaaaa tcaatttatg aaaaagctgt agcagacatt aacgcacaaa caacaatcat
     3061 tcaacaacaa gataaaacat tagaattgca ccttgaccag ttagatactg aacaacaggc
     3121 aatacaaaca gaaatggatg cagttaaaaa ggtaatcgat aaaaacatag aagaaacatt
     3181 caaaacattt gcataatact ccgattttta accggctttc ggtaaagaat taatctgaaa
     3241 gtcttatcat gaaagccggt tttttattaa aaatcgaagt acattaaata gaggattttt
     3301 ccttgcaggc actttaaaaa cgtgctgaaa aacctttata ataggtaata aaacttaata
     3361 tattgttaaa ataaacactg aaataatgac atttcaaaaa ggataattaa attttaagaa
     3421 ggttagataa ttaataagaa cggagattca atatatgggt atggcagctt cacaagccag
     3481 atatttaggc ttaacagcaa gaaaaacaaa cgttgaatat gaaggnnnnn nnnnnnnnnn
     3541 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnt
     3601 cctacacaaa ctgattatta ttctgataac tacacttaca gtgattcttc agctactgct
     3661 gacggaaaag ttactatatc aaatattgca gaaaatgaag gttctgaccc accgacttat
     3721 actgtagata tttcctacaa tgtggatgca atgcagtatc aagctcagaa caaccaacag
     3781 gtttatacaa ccaaaaatga tgatggaacc tatgagctcc actttaaaga cggcacatca
     3841 aaaaccatta aaaaggttga aggtaatttg tctgaaacac tggtaaatga aatgaataaa
     3901 gcaggcggca caacagaaaa ccacgttgat gacgaatatt atacctatac taatacggca
     3961 aacaatgcta cttattatat aaatgcgaca gcatcaaagt ttgatccgga aaagacaaat
     4021 acacaacaaa cagtaaatct ctactcacaa ataaaaacaa cagaatctgt atcagagcag
     4081 ctaaaaaatg taaccatgac aaaaaccagt gatggaacat atacaaaaat gacctggaca
     4141 gatgaaaacg gtgtggtgca aaacagaaat ctctctgcag gaagagatta cgactctgat
     4201 gcttatgatc aggcaatgca acaatacaat atcgataaag caaactacga caaagaaatt
     4261 gccgatatca atgctaaaac agaagagttg cagcaaactg acagaacact tgaattaaga
     4321 ctcaaacaac ttgatacaga gcaagaagca ctgcaaaccg agctcgactc agttaagaaa
     4381 gttattgata aaaacgttga taacatattt aaaacatttc aatagttaga taaaaattga
     4441 ttatgcgagg ataaaatgtc ttataaaaat gatggatacc tggtaatagc aaacaaattc
     4501 ggcaaagcaa gctctgatgc aaaagcacag ctgtttgaaa catatgaccg tttaagagac
     4561 ttaactgtaa gcggttcatc acttgatggt gctggttttg gaacagctgg cagcttttta
     4621 tggcagattg caagattgat ttcgccaagt gcttttatgc ctgttttggg cggtaataca
     4681 tcaatgaata ttccgggtac atcatactgg tcgccaatta gcggtggtaa ctctattctg
     4741 gatagcggca gtgcagcttt tggtgtaaca ggcctgggca attatcccgg ttttcctagc
     4801 ggtgcagctc ctattgcatg gggttttggt atggacacga gttatgacac atcaggcaca
     4861 atcacaggcg gtgcatccag cctttattct gcaagcagca ttggcggctc tgtaggttta
     4921 aatgcagcag catatggtgc aggtgtagca acaggttttg gtgttcccgg tacaagctgg
     4981 gtattgccaa cagcaggtgt tgtttcaggc tttgcaggtg ttgttcaggc aatggctcct
     5041 tatatgggca gctttggtct tggagcaaca gtgcttggta acttgcttca aggtacatct
     5101 tcagcaggtt tggccgctta tcaaaacatt tccggaagta ttttatccaa cgctgataca
     5161 atactttcaa acaaggtaag aaacatagaa accgttgtaa aaatgcttga tacacagggc
     5221 gatattgtta agaaaatgct taaagactct atcgaaggcg acagcaaaca agttcaaaac
     5281 atgtaatata aggaagttta tgaaccagag aacatatata cgtgctgtga atacagctat
     5341 tttggacaga tgttttattc tttctgtctt aaaaaagatt gtaacttttt attacaattc
     5401 atttgttttt caccccaata tattcaagaa ttatgaaaaa gtgccgaata atactacaga
     5461 gcacaaaaat tgtctggctt ttctaaaagc cgttgacagc gcaaatatta atttcatata
     5521 ttaagatata ttacaaaact cttgatataa ggcaataata tgaagtgttc tgtttttata
     5581 gttatgtagg tccaagtgga caaggagtca acattgtttc aagatgcttt aatgacaaac
     5641 ttgcaaaaaa tagtaaactt cttcggctat ttggtgtctt attttaaaag gcataatcct
     5701 ctgctggaat ttggaaatca aattatggca atggtaaaag actatttgac tatgaacaga
     5761 aagctcaaaa tggccaaata cagagttaat taccagatgt acaaattaaa ccagatggag
     5821 cagttgattg ccgaaaacaa tgagcacgtt ttcttacgtg gaaacaagct caaccttcaa
     5881 agataactta actagataag ggtgggcccg ctatgggaat ggcaacatca caactgagat
     5941 taatgtattt aaatgcttac aggttagacc ttgagtataa aatacagctg attacagaag
     6001 caaaaatgaa tctgtcaaaa acttgcactg accttctaaa cgttggtaca gaccttgatg
     6061 ctgatgaccc tatggttaaa aagctggagg ccagaaaaga acgactgaac gttatggaaa
     6121 agaaactcga tatgcagatg caacagtatc agaacaagtt aaaaatgatt gatacagaat
     6181 actcatcctg tgaaaatctg ttgcaaaaga atatcgatag gtcatttaaa tactagctag
     6241 cggcatctga tgctaattag cagttttann aggtttttga attagacata gataatttta
     6301 taaagttttt agcttcattt atcggcacgg caaacccgat gccgatattt gatatattgt
     6361 tatccggatt ataaattgat tggcttattc cgataacttc tccatgtata ttgataattg
     6421 gcccgcctga attacccgga tttattgctg catctgtttg tattttattt tttgtataat
     6481 caattctaga aacaatacct gttgtcaaag taccgttaaa cccgaaggga ttacctattg
     6541 caagcacctt ttggccgact ttcacctttt cagaatcccc gagctcaata acaggcagag
     6601 gctttttagc atttatctta ataagagcaa ggtcattatc ttttcccatt acagaaagta
     6661 tttcgccttt aaaaacttcg cctgtagata tagttacctg aatagacggt gcctcggtaa
     6721 caacatgtga gcttgttaaa attatgcctt tggggtctat aatgcagccc gtgccgcttg
     6781 atatcccctc ttttacatct gcctctataa gaactatagc cggtgacatt ttttcatata
     6841 tctgtgatat tgttgtatct tcatcgtatc tgttgccgtc taaaataccg caatagccca
     6901 tttgaacact tgttcccatc attactgcca atgatagtgc agttactaca aacttgcgca
     6961 taaactctct cctcttaatt tttaattttg tgttatgtgc agattatggt ttcttatttg
     7021 aagaaaatta atacaatatc ggagaaaagt aatagtaatt aatttgcgca ttaaaataag
     7081 tattcaaatc aatcttgtat ttgtaaaaaa ttattttata ttctgtttaa ttcttaaata
     7141 ttgtgttcta taatcaaagt atgattacac aagaaaaagc cgtaataaaa gaatttgcac
     7201 aatttgatga aagtataata aaagctgtac aaaaaattgc aggtaaagac aatgtaattt
     7261 cagatataga aggtctttat gcctattctt ttgactgtgc gcacattcct ttttcaaaag
     7321 agtatccaag acttgttgta tttccgcaaa acacgcagca ggtaagcgat attgtaaaac
     7381 ttgcaaacaa aaatcgtatc cccattatag aaagaggagc agcctcaaac catgcaggcg
     7441 ggtgttcacc ggttagaggc ggaataattc ttcatttttc aaaaatgaat caaatacttg
     7501 aaataaataa cagtgattta acctgcaaag tccaacccgg tgttgttgtt ggtgacttgc
     7561 aaaaagaagc actaaaaaaa ggtctgtttt ttcctccgga cccgtccaac cttgcggtat
     7621 ctaccatagg aggaggtatt gcactttcgt caggcgggcc gcgcgcattt aaatacggta
     7681 cgttcaaaga ttacgttctg gatttggaag ttgtactggc tgatggaacc attctaagaa
     7741 caggtgcacc tactgtaaaa aatgttacag gttacaatct tacacagctt attgttggtt
     7801 cagaagggac tcttgcagta ataacagaag ccactttaag acttattcct gcaccggaaa
     7861 caaccaatgt attacttgct tattttgagt ctatagaaaa ggctgtagat gctgtcagtg
     7921 caattataaa taatcattta acaccttctg ttgtggattt gattgataaa aagacagtac
     7981 aaacaatcga gaacttttat cccacaggtc ttttgtgcga taaagaggct gttttgctta
     8041 ttgaaataga tggcgacagc gcgtcagttg cacaccagca agaaaaaatc attgaactgt
     8101 gcagaaacaa tggagcacaa aatatcgatt gtgcaaagga cgaaaagcac agacaaaaaa
     8161 tatggacggc gagacgctct gcatttggag cttgtgcaca gcttgcaccg aatgttatta
     8221 cggaagatgt tgttgtacct cgttctaaaa tagctgcact atctaaagga atacttgata
     8281 taagcagaaa atacaacctg ataacaatgg ttatggggca tattggtgac ggaaacatac
     8341 acccgaattt tgctcttgat ttgagagata aaaaacaaaa agaaaacttt gaaaaagcaa
     8401 aagctgaact tttccgtctt gcagtaaaac tcggcggaac actttcaggt gagcacggta
     8461 tcgggtgcca gaaggccaac ttcctgccta ttgctcttga taaaaccgct ttgaacataa
     8521 tgattcaatt aaaaagagta tttgacccca actatatttt gaatcccgac aaaatgttgt
     8581 aatatattat taattgcaat tgttataaag gagaattttg tgaacaactg tgtaatctac
     8641 tgtacggtgc ctaatgaatt taacgccaac ttgattgcaa caacactcat cgaagaaaac
     8701 atagcggcct gtgtaaatat gctcccttct gttacctcca tttacaaatg ggaaaacatt
     8761 gtacagacag ataacgaaat gcttcttata ataaaaacaa gagaagaaaa atttgaagaa
     8821 gctgaaaaaa agataaaaga gctgcatgaa tactctgtac cggaaatcat tgcacttcca
     8881 ataatcaaag gaagtgaaga ataccagaga tggattgtta aagaaacaga atgacagaaa
     8941 taactacaga taaagaacag gaatattgtc taacttttaa tgcaatgacg aaatttttgc
     9001 gttctctggg gcttactgta aaaacaaata caaaagcaag aggacatcag ggatttttct
     9061 taaaaaacag gatagatata tctgcttcta ttccgtacaa aagaaaaata gaagttttaa
     9121 tacacgaatt tactcattat atacacgcaa agatagaccc cgaggttttt aaaaatcatg
     9181 gaacactgga atctcttttt cccggtgctg acataaaaaa aatacaaaca gaaatgctgg
     9241 cagtaacacg atttgttgat acaaataaat cttttaatat acttaatgct cgcagaaacg
     9301 aaattcttga gcagataaaa caaaccgata aaaaaataaa atcgatttat cctgatttta
     9361 aacgctcata tgcttatcca aaatttgaaa aaaccataaa aaaaacagat gcaaaatacc
     9421 tgctaaaata tgacaaagtg cgcgtaaaaa caatgtttac aggcaagact aaagactact
     9481 caataaaaac agtggaagaa gattttcctc aatttgaaga gtctgtgcat caatacatac
     9541 gcctaaagtc ccagcaaaga gcgttaaaac gggttgcttc cagaatctcc agactcaact
     9601 cttattacaa caggccaaca gaattgtttg cccggtttgt ggaggggctg ttcatagata
     9661 caaatatggt gtcagaaatt gcaccatata cttatctggt cttttgcaaa gagcttgcga
     9721 tgaacagata tttggaactt gcggatttta taaataagtt tttttaataa tttctttaat
     9781 tttgcaaatt aaagtataat tataaccatg agcaaacaca aaatatggct t
//
LOCUS       DABS01000037           14536 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9181, whole genome shotgun sequence.
ACCESSION   DABS01000037 DABS01000000
VERSION     DABS01000037.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 14536)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 14536)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14536
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            265..864
                     /gene="plsY"
                     /locus_tag="CPT85_01455"
     CDS             265..864
                     /gene="plsY"
                     /locus_tag="CPT85_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015078872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-phosphate glycerol 3-phosphate
                     acyltransferase"
                     /protein_id="DAB26476.1"
                     /translation="MLQIAIAIVMGYLIGSIPTGYLIVKAKTGQDIRKVGSGSTGATN
                     VKRVLGKKWFFIVMLLDAIKGALPVVLAILFLHAYSQYGLTPVAAAVAVLLGHSKSVF
                     LGFTGGKSVASGVGTILALNPLVGLSVAVIWGIITWVSKYVSLGSIIALAVSPFIMWA
                     FKQPAGYIAYCALGAVYIIWLHRENIKRLIKGEENKVRQ"
     gene            876..2393
                     /locus_tag="CPT85_01460"
     CDS             876..2393
                     /locus_tag="CPT85_01460"
                     /inference="COORDINATES: protein motif:HMM:PF00390.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001252789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26477.1"
                     /translation="MPQYQGFKTVPKIAIDDKDMLSLVYTPGVGSSCLAISKNPEATS
                     IYTNKLNSVAVISFDYEKSLKRAIFLKSVLLIDAYPLQIKQTTKQDLKFAVENIEINF
                     CAIDLSLIEDFVKDIDFDVEIPVLKGSVPDLKGFFGAISRNVFMIDPAKLKGNIQERS
                     LELHELSGGVIETELTEEKRNKPVAIVSDGTAVLGFGNIGAVASIPVMEGKAALYAEL
                     ADVDAMVFCIKSQDTQDVIKIVELFADSFSGIHLEDIAAPACFEIENTLTDRLDIPVF
                     HDDQHGTAIIVLAGLLNALVLEDKKLSDIKIVIAGAGAAGNAVAKLLLFAGAKNIIMD
                     DALGVIYKGREQNDKYSEELAQVTNLNDLHGDLKDAVKNADVFIGLSKGGILTEEMIQ
                     SMEYKPVVFALANPEPEILPDEAKHAGAYIVSTGRSDFENQINNALAFPGFFKGLIDA
                     KIKKVTNEIKLECALMIASMVPTDELTPENIMPDALDRMIPLQIARVIKEKFGNN"
     gene            complement(2390..2962)
                     /locus_tag="CPT85_01465"
     CDS             complement(2390..2962)
                     /locus_tag="CPT85_01465"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26478.1"
                     /translation="MSINYGAPIYPNCFDQLTTHGIVAEDVVGYITDSPSPYLQNYVA
                     QRGGYTPSVPWTPSIPGRVLPDPLPSVSPQGGPVMGYEPPRMQERLPRGDVYQTVPNE
                     REINHVVKNEKNNTWKKVAAGILLTGLAVFGIVKGCQIYKSGNSGLKNIGNWFSNVGN
                     KMGNAFKQGWTSTCDFFKNCWNKLFKKNNP"
     gene            complement(3057..4538)
                     /locus_tag="CPT85_01470"
     CDS             complement(3057..4538)
                     /locus_tag="CPT85_01470"
                     /inference="COORDINATES: protein motif:HMM:PRK00913.1-4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="DAB26479.1"
                     /translation="MSEKIEISVSKGLLEETPANVLVVNLFEGVKIPAGATGAIDVAL
                     DGLISKFIIAKEGFDGKFGKMYLLPTYGKIAAEKVLLVGLGKNKDFTPNRLRELSAKI
                     IKKCRKMGNAKKVISVLHGAGIGGXXXTEGTLIGSYSFDKYKTEKSTKKVDELVIVDM
                     VEENCKKAKAGIKKGRIIGSAMNFARDLSNEQPAYATPSKLAEIAQSFKDLEVKVYDK
                     EEIEKMGMGAFLGVAKGSSQPPKFIHMHYKGSNQKLIQRKIAIIGKGICFDSGGLDIK
                     PPSSMLNMKDDMSGAAAVLGVMSVLKDLKPNCEVHGIIAACENMPGCSAYKPGDVLTA
                     KNGKTIEVDNTDAEGRLTLADALCYACELDVDEVIDIATLTGACVVALGSAASGIMGN
                     HQPTIDKLIKCANSGGEKMWQLPMFDEYKESLQSDVADMRNTGSRMGGAQIAGIFLQN
                     FVKKVHWAHIDVAGTAFLDKPQNEFPKGATGAGVRTLINYLML"
     assembly_gap    4152..4160
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4587..6623)
                     /locus_tag="CPT85_01475"
     CDS             complement(4587..6623)
                     /locus_tag="CPT85_01475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014857125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="DAB26480.1"
                     /translation="MENLTPQNTENIQNTQNASLPVVKKYVLKKSSAQNTQVQYKIDY
                     EKDLNPAQLEAVKTKDGAVLVIAGAGSGKTKTLTYRVARLIESGVKPDNILLLTFTKK
                     AADEMLNRAVMILDSRCEKVAGGTFHSFSNYILRKYSDCLELRNNFTIIDRADAEDVI
                     NHIRAQVATKQEKRFPRKGTILDIYSKAVNKNMSAEAVIESEYNQFAHCVEKINEISK
                     QYISYKRENSLLDYDDLLLYLRTLLQSNDEIRKKLSNQYKYIMIDEYQDTNSLQADII
                     RLLASEHNNVMAVGDDSQSIYSFRGANFRNILDFPAIFPNTKIIKLEQNYRSSQNILA
                     LTNEVISRAKEKYTKNLFSTIEHPEKPALICTNDMQTEAEFVAQRVLELQEDDISLND
                     IAVLCRSARMTYNLEIELAKRAIPYRKFGGLKFIETAHVKDVIAHLRVVLNPNDIISV
                     NRILLLLDGIGAQSAMKLLPVVAKENLDTEKMMLPVKKNTDGIKKLFTTIEQQRKYLM
                     NPATVVDNILAYYEPVLMEKYDDYQKRLKDLEHFRYLSEQYKNLEDFLSDLALKPPDS
                     SVSEVEDGAQPDEYLTLSTIHSAKGLEWKAVFIIGAVDGRFPSVYSFNSEEELDEELR
                     LMYVAATRAKSYLYITYPIDMFDHATGMVLSKPSRFLDGIPEDILERWALELED"
     gene            6762..6899
                     /locus_tag="CPT85_01480"
     CDS             6762..6899
                     /locus_tag="CPT85_01480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012625631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="DAB26481.1"
                     /translation="MDKYICLVCGYEYDPEENNDIAFEDLPADWICPVCGVGKDQFTK
                     A"
     gene            6967..8148
                     /locus_tag="CPT85_01485"
     CDS             6967..8148
                     /locus_tag="CPT85_01485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002353656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold hydrolase"
                     /protein_id="DAB26482.1"
                     /translation="MDLKIRPIKNNVFYIGSKDANRQLFDQLVPLPQGTTYNSYLVKG
                     SEKTAIVDTDYPKKLDEYKKRLQENNITHVDYIISNHAEQDHSGGIPMLLEMFPQAKV
                     VTNAKVKENVMNMLHVEEDKFIVINDGDELSLGDKTFQFIFAPFVHWPDTMFSYLKED
                     KMLFTCDFLGAHYTKHELFADYTDGLVEAAKRYYAEIIMPFRSFAKKYTDKVKAMDVD
                     IILPSHGPIYDKPQWILDLYADWTSDRVENKVVIPYVSMYESTTMLVDRLNQKLTEAG
                     IEVKLFDLVHCDEGELSMELVDCATVVLGSSMVLAGPHPAAVTAAYLVNALRPKLRYY
                     SIIGSYGWGGNLEGTIEKMFTIIKPEKLDYVIVKGQPRDEDFAKIDVLANQIIEKHKS
                     L"
     gene            complement(8201..8641)
                     /locus_tag="CPT85_01490"
     CDS             complement(8201..8641)
                     /locus_tag="CPT85_01490"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26483.1"
                     /translation="MINRTNNISFKRAIGLPSIYNMKPENMAKLDTTINVCNSFFPNN
                     DVIFGADSNGELVYEVRKTFPLLNLMHPKVLENIKNIKIEDLSNLVLMAAAMKDAHNK
                     LWNLKEPFLRQKTDNIDNMDDLEIAYEVRDAVMDFNDLHPEDEN"
     gene            complement(8707..9243)
                     /locus_tag="CPT85_01495"
     CDS             complement(8707..9243)
                     /locus_tag="CPT85_01495"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26484.1"
                     /translation="MYTTPVTFRQFNISPSAQKAHQSSQCEMVKSFCNTFVLPDDACN
                     HSRFDENLASKIASYKDRALKPVTDMLSCADNEKDITAGLFLLNRIIDAGAQSAYKTY
                     PVISKFNYSSSSNVQTMLAGVYRKTLVPDAFGPSMTMFLKNSQNPKTVPFDPNEEIGG
                     AILEYLRNKSAVINYSKN"
     gene            complement(9256..10752)
                     /locus_tag="CPT85_01500"
     CDS             complement(9256..10752)
                     /locus_tag="CPT85_01500"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26485.1"
                     /translation="MSYIKPYQDVETQRQYRNHTRTQKKNISEMKEGVVVNSLIRDSQ
                     DCPNIGNMYDNLVIPDKTITPDSFERIDFRNRTKKEKNTKPKTLTPLLAATTALFGVL
                     AGSMIMLASAAKHKAKLPDWKTLPEIPKNVAINNEPHFVTYLMIRDPNMRNVLGALGV
                     FVLSAVGLAGKNFVDGVKEIWVRKKQADVQKDLQEKLIAVETQSFSGKMQILRNMLSE
                     KASELDSILHKENIGNEHAAFKKFISFKHSQKQQPEKNNTLAYAAVGATAALITGLGF
                     LAFKNVQKTAKIYESYAQSMETKIKELIDKQSKWDKSSLDKVKNICVSMNYSSQKIEK
                     TLADAKNLPDGFIKEVQKEAEKVTQEGAEAIAGKPGTKPSLYSHTDDDRAHLYNMIVN
                     WENPLLKILFAGLSTVTTVGYVGSAAIEGIKEAQVIKENAKTELELQKRLVNVELNNF
                     ESKKRSVIEPMINEFRVQAMNGKDKNELKTRAENILYEIKNGPPFVYS"
     gene            complement(10864..11445)
                     /locus_tag="CPT85_01505"
     CDS             complement(10864..11445)
                     /locus_tag="CPT85_01505"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26486.1"
                     /translation="MAATVARGSNNRIGTCPHGLPMGACPICNGMGGGGGSVKKNTKP
                     REMSYNECYAVWQMMKAQKAAHKHTQQLFAAQDMAAYMNKIQQQINAMKLALINSSLP
                     KPLIKAFTVLADSVLMPVAKALQAVTNTVQNIANTVIKTLNEIKQKFVEIADKLTAMF
                     GEAKAAIQKKIDEKFKDIKKKIFNLFGLVGXRR"
     assembly_gap    10875..10876
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(11653..12954)
                     /locus_tag="CPT85_01510"
     CDS             complement(11653..12954)
                     /locus_tag="CPT85_01510"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26487.1"
                     /translation="MLLAYFSYRTQKKEFYKPLIAFAGFLALNFLVFSSYNYILNFID
                     YSNPLGSESAKAVHGFRGGIKAFVANYIRYMFMLFDFSGFRYSEYVGEHITNAKLAIL
                     AFLHIPQDLGVEMSDYNEINNRFINVKVGAGILGFLVFLPSLVAAVVAGFVKRHNKKL
                     TALCAFAAMFFINVFCLSFSIAYMVFSIRFLTFLIVISSPVIALSYMKKTNILKLLIL
                     FYVMSYFLIMSVNLSGRQFGDIAKLLIQSPSFSQAREKIRCALYIGYEGKAALCYIRD
                     DIRKMPAGSKIALFSTASDKFYILNMLNSHGYKIDTLLPENAPLYDLSGYDYIIMTDK
                     VLISTVLTKTTAQTKTEYKIDKNGNAYFPEYRPFTCVYEKHGRGFYTSEDKNGIIMDS
                     RCFIDIPFFEKRGFIIQRAYDFKAETPQASSYITIYKNTRK"
     gene            complement(12845..13828)
                     /locus_tag="CPT85_01515"
     CDS             complement(12845..13828)
                     /locus_tag="CPT85_01515"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26488.1"
                     /translation="MLFFISLLMVFVSSYLCASVFCTKDKNHKPCGPSGFLYTLITMF
                     AQVVLTFELLSLFKAISKTGVLVLNIFFLTLSICLWLKKGRPLYVPRVKKTFEDILGA
                     LKKDKILMIMAFGFVFYMAAVVILDCIMPVSGGDALTYHLNRASYWLHQGSLNHFVIT
                     DDRNLVMPINSEIIYLWNLLFFKNDIGLFFVSFIGYIGAVFSIYNILEYFSFSKRRIL
                     WTIFIVSSFASVMAEISSLETDVLLAGLVLSCITLYLYALKEKSVLNIFYAALVYALA
                     MGTKXTCYYSFSRCVFAFGLFFLQNTEKRVLQAAYCFCRFFGFKLSCVFKL"
     assembly_gap    12986..12987
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(14016..14504)
                     /locus_tag="CPT85_01520"
     CDS             complement(14016..14504)
                     /locus_tag="CPT85_01520"
                     /inference="COORDINATES: protein motif:HMM:PF01584.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26489.1"
                     /translation="MTLDAAVYGKDQYIVFHLNNHTYCVYSLFVKELINVKNYPVTKI
                     PYTPSYITGVINHKGNFYTVMDLKKFIGLEDKNSERLCDELSDKKIIVLESSELKLAL
                     LVDDIVNIINIAKESMEVKNDMALDNMFIQAEAFIDNQVYNILNVDKLINDKRLYVDN
                     SN"
BASE COUNT         4363 a         2852 c         2698 g         4610 t
ORIGIN      
        1 ttttcattta ttatgtcata cagagctctt tgcagtgtta ccggcttttt atactccatt
       61 ctggaaaaat aatcatcgta actgtaaggg ttgtttacaa tccttggttt gttgtccgct
      121 tgtttctgct ttttaaatga tgttttgttt gtgtaaaaac ctgattgaat tttcatatgt
      181 ttattttaat gcgctgaatt taacaaattg ctctttttga ggtaaaataa ttaagaaaaa
      241 ttaaaacaaa cgaggagaag aataatgctg caaatagcaa ttgcaatagt aatgggctac
      301 ctgataggct caataccgac ggggtatttg atagtaaaag ccaaaacagg ccaagacatt
      361 agaaaagtag gctccggctc aacaggtgca acaaacgtaa aaagagtgct gggcaaaaaa
      421 tggttcttta ttgtaatgct gcttgatgca attaaaggcg cactgcctgt tgtgcttgca
      481 attttgtttt tacacgcata ttctcaatac gggctcactc ctgttgctgc tgcagtggct
      541 gttttgctcg gtcacagtaa atctgttttt ctcggattta ccggaggaaa atctgttgca
      601 tcaggtgttg gcacaatact tgccctaaac ccgcttgtcg gtcttagcgt ggcagttata
      661 tggggaataa tcacatgggt atcaaaatat gtgtctttgg gctccataat agctcttgct
      721 gtttcacctt ttatcatgtg ggcatttaaa cagcccgcag gctacattgc atactgtgcg
      781 cttggtgcag tgtacataat ctggctgcac agagaaaaca taaaacgcct catcaaaggt
      841 gaagaaaaca aagtaagaca atagaaagat aaattatgcc gcaataccaa ggttttaaga
      901 cagtaccaaa aatagcaata gatgataaag atatgctttc gcttgtttac acaccgggtg
      961 taggctccag ctgccttgct atttcaaaaa atccggaagc cacatcaatc tatacaaaca
     1021 agctaaattc tgttgctgtt atttcttttg attatgaaaa atctttaaaa agagcaatct
     1081 ttttaaaaag cgtactcttg attgatgcct acccgctgca aataaaacaa accacaaaac
     1141 aagacctgaa atttgcagtt gaaaacattg aaataaactt ttgcgctatt gatttgtctt
     1201 tgatagaaga ttttgttaaa gatattgatt ttgacgttga aatacctgtg ctgaaaggtt
     1261 ctgtgcctga cttaaaaggg tttttcggtg cgatttcaag aaacgtattc atgattgacc
     1321 ccgcaaaact taaaggaaat attcaagaac gctcgcttga gctgcatgag ctatccggcg
     1381 gagtcataga aacagaactc acagaagaaa aaagaaacaa gcccgttgct attgtctctg
     1441 acggaacagc ggttcttgga tttggaaaca taggtgcagt ggcttctatc ccggttatgg
     1501 aaggaaaagc tgcgctttat gcagagctgg cggatgttga tgcaatggtg ttttgcataa
     1561 aatcacagga cacacaggat gtaatcaaaa ttgttgagct gtttgcagat tcgttctcgg
     1621 gcatccacct tgaagacatt gctgcacctg cttgttttga aattgaaaac acactgacag
     1681 acaggcttga tattccggtt tttcacgacg accagcatgg tacagctatt attgtgcttg
     1741 caggtttatt aaatgcgctt gtgcttgagg acaaaaagct atctgacata aaaatagtga
     1801 ttgcaggagc gggcgcagca ggcaatgccg ttgcaaaact ccttcttttt gccggagcaa
     1861 aaaatatcat aatggatgac gcgctcggag ttatctacaa gggaagagaa caaaacgaca
     1921 aatactcgga agagcttgcg caagtgacaa acctcaatga tttgcacggt gatttgaaag
     1981 atgccgtaaa aaatgcagat gtatttatag gcctttcaaa aggcggtatt ttgacagaag
     2041 aaatgattca atccatggaa tacaagccgg ttgtgtttgc gctggcaaac cccgagccgg
     2101 aaatactgcc cgatgaagcc aaacatgccg gagcctacat cgtctccaca ggcagaagcg
     2161 attttgaaaa ccagataaac aacgcgcttg cattcccggg atttttcaaa gggcttattg
     2221 atgcaaaaat caaaaaagtc acaaacgaga taaaactcga atgtgctttg atgatagcct
     2281 ccatggtgcc aacagatgag cttacgcccg aaaacatcat gcctgatgca ctggatagaa
     2341 tgattccttt acaaattgca agggttatta aagaaaaatt cggtaataac taaggattgt
     2401 ttttcttaaa cagcttgttc cagcagtttt taaagaaatc acacgtactt gtccagccct
     2461 gtttaaaagc attgcccatt ttatttccga cattgctaaa ccagttgccg atgtttttta
     2521 agcctgaatt tccgcttttg taaatctgac agccttttac aataccaaaa acagcaagac
     2581 ctgtcagtaa aatgcctgcg gcgacttttt tccaggtatt atttttttcg tttttaacaa
     2641 cgtggttaat ttcacgttca tttggcacag tttggtagac atcacctctt ggcagacgtt
     2701 cctgcattct tggcggttca taacccatta cagggccgcc ctgcggtgac acagacggaa
     2761 gcgggtcagg aagcactctg cccggtatag aaggtgtcca cggtacagag ggggtgtagc
     2821 cgcctctttg ggcaacataa ttttgcagat acggcgaagg cgaatctgta atataaccta
     2881 caacatcttc ggcaacaata ccatgtgttg tcagctggtc aaaacaattt ggataaattg
     2941 gtgctccata attaatagac ataatcgtaa tctcacacta taactttcac acatgttata
     3001 aaagtatttt tgtgagcaat tattgcctta atcaaagcat tgtagtttac aaaactttac
     3061 aacatcaagt aattgatgag agtgcgcaca cctgcacctg tagcaccttt aggaaattcg
     3121 ttctgaggtt tatccaaaaa tgctgtgccg gcaacatcaa tgtgagccca gtgtactttt
     3181 ttgacaaagt tttgcaagaa tatacctgct atttgagcac cgcccatacg tgaaccggta
     3241 tttctcatgt cagcaacatc gctttgcaaa gactctttgt attcatcaaa cattggaagc
     3301 tgccacattt tttcaccgcc ggaattagcg cacttgatga gtttgtcaat tgtaggctgg
     3361 tggttgccca taatacccga agccgcactg cccaaagcca caacacaggc accggtaagt
     3421 gttgcaatat caattacctc atccacatca agctcgcacg catagcacaa agcatctgca
     3481 agcgtcagtc tgccttctgc gtcagtgtta tcaacttcga ttgttttgcc gtttttggcg
     3541 gttaaaacat cacccggttt gtaagccgaa catcccggca tattttcaca tgcggcaata
     3601 atcccgtgga cttcgcaatt gggttttaaa tcttttagca cgctcatcac accgagaaca
     3661 gctgccgctc ctgacatgtc gtctttcatg ttgagcatag aagacggagg tttgatatcc
     3721 agcccgccgg agtcaaagca aatacctttg ccgatgatgg caatttttct ctggataagt
     3781 ttctggttag agcctttgta gtgcatatgt ataaattttg gcggctggct gctgcctttt
     3841 gcaacaccta aaaatgcccc catacccatt ttttctattt cttctttatc ataaaccttt
     3901 acctcaaggt ctttgaagct ctgtgcgatt tcagcaagtt ttgaaggtgt ggcataagca
     3961 ggctgctcgt ttgacaaatc tcttgcaaaa ttcatggctg aacctatgat tctgcctttt
     4021 ttgatacctg cttttgcttt tttgcagttt tcctcaacca tatccacaat aactaattcg
     4081 tcaacttttt tagtcgattt ttctgttttg tatttgtcaa aagaatatga accgattaaa
     4141 gtgccttccg tnnnnnnnnn cccgccaata cccgcaccgt ggagtacaga gataactttt
     4201 tttgcattgc ccatttttct gcatttttta ataatttttg cactgagctc tctcaatctg
     4261 tttggcgtaa aatccttgtt tttgcctaat ccgacaagca gaaccttttc tgccgcgatt
     4321 tttccgtatg taggcagaag gtacattttg ccgaattttc cgtcaaatcc ttcttttgca
     4381 ataataaatt ttgaaatcaa tccgtctaac gcaacatcta tggcacctgt agcacccgcc
     4441 ggaattttaa ccccttcaaa aaggttaaca acaagtacat ttgcaggagt ttcttccaaa
     4501 agaccttttg atacagatat ttctattttt tcagacatat aattctccgt tttttctgat
     4561 tcttagttaa aaaaattata cgcttatcag tcttctaatt caagcgccca gcgctcgaga
     4621 atgtcttctg gtattccgtc caaaaatctt gacggcttgg acaaaaccat gcctgtagcg
     4681 tggtcaaaca tatcaatagg ataagtaata taaagataag acttggcacg tgttgcggca
     4741 acatacatga ggcgaagctc ctcgtccagc tcttcttcgg aattaaaaga gtaaacactg
     4801 gggaagcgcc cgtcaacagc acctataata aaaacagctt tccactcaag cccctttgca
     4861 ctgtggattg tggacagagt aagatattca tccggctgtg ccccgtcttc aacttcagat
     4921 acagagctgt caggcggttt cagagcaagg tcgcttaaaa aatcctcaag attcttatac
     4981 tgttctgaca aatagcgaaa atgctccaaa tccttcaatc gtttttgata gtcatcgtat
     5041 ttttccatca aaacaggctc gtaataagca agaatattat ccacaacagt agccggattc
     5101 ataaggtatt tgcgctgctg ctcgattgtt gtaaagagtt tttttatgcc atccgtattt
     5161 tttttgacag gaagcatcat tttttccgta tcaagatttt cttttgcaac cacaggtaaa
     5221 agcttcatcg ctgattgcgc gcctataccg tcgagcaaaa gaaggattct gttaacgctt
     5281 ataatatcat tggggttcaa cacaacacga agatgcgcaa ttacgtcttt aacatgggct
     5341 gtttctataa atttgagccc gccgaatttt cgataaggga ttgcacgctt tgcaagctct
     5401 atttcaaggt tataggtcat tctggcactg cggcacagca cagctatgtc atttaaagag
     5461 atgtcatctt cttgcagctc cagcactctt tgcgctacaa actccgcttc tgtctgcatg
     5521 tcgtttgtac aaatcaaagc cggtttttca gggtgttcaa ttgtggaaaa caaatttttt
     5581 gtatactttt cctttgccct tgagataact tcatttgtga gagcaagtat attttgcgag
     5641 cttctgtagt tttgctcaag ttttataatt tttgtattcg ggaatatagc cggaaaatca
     5701 aggatatttc taaaatttgc ccctctgaaa gaataaatgc tctgcgaatc atcaccaacc
     5761 gccattacat tgttgtgctc tgacgccagc agtcttatga tatcagcttg caaagagtta
     5821 gtgtcttgat attcgtctat cattatatat ttatactggt ttgagagttt ttttcttatc
     5881 tcatcgtttg actgcaagag ggtgcgaagg tacaaaagaa gatcatcata atcaagcagg
     5941 ctgttttcgc gcttgtagga gatatattgt tttgaaattt cgtttatttt ttccacacaa
     6001 tgtgcaaact gattgtattc gctttctata actgcttcag cactcatgtt tttgttcact
     6061 gcttttgaat aaatatcaag aatagtgcct tttctcggga agcgtttttc ctgttttgtt
     6121 gcaacctgtg cacggatatg gtttatcaca tcttctgcgt cagcacggtc aataatggtg
     6181 aaattgtttc taagctcaag acagtcagag tattttctta agatatagtt tgaaaaagaa
     6241 tggaaagttc cgcccgctac cttttcgcag cgcgaatcaa gaatcataac tgcacgattg
     6301 agcatttcat cagctgcttt ttttgtaaaa gtcaaaagca ggatattatc aggttttaca
     6361 ccgctttcaa taagccttgc cacacggtag gtaagagttt ttgtcttgcc ggaacccgca
     6421 ccggcaataa caagcactgc accgtctttt gttttgacag cctcaagctg ggccgggtta
     6481 aggtcttttt cgtagtctat tttgtattga acctgtgtgt tttgtgcgct gctttttttc
     6541 agcacatatt ttttgacaac aggcaaagat gcattttggg tgttttggat attttcggta
     6601 ttttgcggtg ttaaattttc catagaaata ttataccttt ataacctatt tttagaaaca
     6661 ttgaatatta tttacaatat ttaacttagt ctatacggca atttattttt atcagataat
     6721 aatttatact gctcaggtaa aatgacaaaa ggagcaactc gatggataaa tatatttgtc
     6781 ttgtatgcgg ttatgaatat gaccctgaag aaaacaacga tatagccttt gaagatttac
     6841 ctgctgattg gatatgccct gtatgcggag tcggaaaaga ccagtttaca aaagcataat
     6901 taatcaaacc gttgacacaa aggatttttg gcagtggaat ccccttttat aataaggaga
     6961 ctgaccatgg atttaaaaat cagacccata aaaaacaatg tcttttatat aggttcaaaa
     7021 gacgccaaca gacagctttt tgaccagctt gttccgctgc ctcagggaac cacttacaac
     7081 tcatatcttg ttaaaggcag cgaaaaaaca gcgattgttg acacagacta tcctaaaaag
     7141 cttgatgaat acaaaaaaag actgcaagaa aacaatatta ctcatgtaga ttacattatc
     7201 tcaaaccacg cagaacaaga ccactccggc ggcatcccaa tgcttttgga aatgttcccg
     7261 caggcaaaag tggtgacaaa tgcaaaagtt aaagaaaatg taatgaacat gcttcacgtt
     7321 gaagaagaca aattcattgt aatcaatgac ggagatgaac tatcactcgg tgataaaaca
     7381 ttccagttta tttttgcacc ttttgtacac tggccggaca caatgttttc ttacttaaaa
     7441 gaagacaaaa tgctctttac ctgtgacttt ttaggtgctc actacacaaa acatgagctt
     7501 tttgcagact atacagacgg tcttgtggaa gcagcaaaaa gatactatgc agaaatcatt
     7561 atgccgttta gaagctttgc aaaaaaatac acagacaaag ttaaagcaat ggatgttgat
     7621 attattcttc caagccacgg tccaatctac gacaaaccgc aatggatact tgacctttac
     7681 gctgactgga catcagacag agtagaaaac aaagtggtaa tcccttatgt atctatgtac
     7741 gaaagcacaa caatgcttgt tgacaggttg aaccaaaagc ttacagaagc aggtatcgaa
     7801 gtaaaactat ttgatctggt acactgcgat gaaggtgaac tttcaatgga gctggttgac
     7861 tgtgcaacag ttgtattagg ttcttctatg gttctggcag gccctcaccc ggctgctgtt
     7921 actgcggcat accttgttaa tgcattaaga ccaaaactca gatactactc tattattggt
     7981 tcttacggat ggggcggaaa ccttgaagga acaatcgaaa aaatgttcac aataatcaaa
     8041 cccgaaaagc ttgattatgt aatagttaaa ggccagccta gagacgaaga ttttgcaaaa
     8101 attgacgtct tggctaatca gattattgaa aaacacaaaa gtctttaatc attaaaacaa
     8161 caaaaaaacg cctgaaattt aaatcaggcg ttttttgtat ttaattttcg tcctcaggat
     8221 gaaggtcatt gaaatccata actgcatcgc gcacttcata tgcaatttcc agatcatcca
     8281 tgttatcaat attgtctgtt ttttgccgca aaaacggttc ttttagattc cacaatttat
     8341 tatgtgcatc tttcatagca gcagccatta aaaccagatt ggacaaatct tctattttaa
     8401 tattctttat gttttccaaa acttttgggt gcataagatt taaaagcgga aaggtttttc
     8461 ttacttcata aacaagctct ccattggaat ccgcaccgaa gattacgtca ttattaggaa
     8521 aaaacgaatt gcatacgttg attgttgtgt ccagttttgc catgttttcg ggcttcatat
     8581 tataaattga aggaagtccg atagctcttt taaaagatat attatttgtt ctgttaatca
     8641 tgttccgttc cgtgttaatt atgtgatgtt aaaaaaccct gataaaattt ttttgctagt
     8701 aaaaatttaa ttttttgaat aattaatcac cgcagattta tttcttaaat actcaaggat
     8761 agcgcctcct atttcttcat tggggtcaaa tggaactgtt ttgggatttt gcgagttttt
     8821 taaaaacatg gtcatcgaag gcccgaatgc gtcaggaacc agcgtttttc tatacactcc
     8881 ggcaagcatt gtctgcacat tagacgaaga cgagtaattg aattttgaaa tcacagggta
     8941 ggttttatat gcactttgag cacctgcatc gatgattctg ttgagcagaa acaaccctgc
     9001 cgttatgtcc ttttcattgt cagcacagct caacatgtct gtgacaggct ttagcgcacg
     9061 gtctttgtaa gaggctattt ttgaagccag attttcatca aaacgtgaat gattgcacgc
     9121 atcatcaggc agaacaaagg tattgcaaaa agattttacc atctcacatt gcgaagattg
     9181 gtgcgccttt tgcgcagagg gtgatatatt gaattgtctg aaagtaacag gtgttgtata
     9241 cataacgcac caaccttacg aatacacaaa cggaggaccg tttttaatct cgtacaaaat
     9301 attttcggca cgggttttaa gctcgttttt atctttgccg ttcatcgcct gaaccctgaa
     9361 ttcgtttatc ataggttcaa ttacgcttct ttttttggat tcaaaattat tcaattccac
     9421 attaaccagt cttttttgca gctcaagctc tgtcttggca ttttctttaa taacctgagc
     9481 ttctttaata ccttcgattg cggcagaacc tacatagccg actgttgtga ctgttgacaa
     9541 gcctgcaaaa agtattttta aaagagggtt ttcccagttt actatcatgt tgtacaaatg
     9601 ggccctgtcg tcatccgtat gagaatacaa agaaggtttt gtgcccggtt ttcctgcgat
     9661 agcttctgct ccttcttgag taaccttttc cgcttctttt tgcacttctt ttataaaacc
     9721 atcaggaaga ttttttgcat cagccagagt tttttctatc ttttgagatg agtaattcat
     9781 tgaaacacaa atatttttta ctttatctaa tgaagattta tcccatttgc tttgtttgtc
     9841 tatgagttct tttatcttgg tttccatgga ttgagcataa gattcgtata ttttggctgt
     9901 tttttgaaca tttttaaatg ctaaaaagcc cagccccgta atcaaagcag cagtagcacc
     9961 aacagcggca tatgcaagtg tattgttttt ttccggctgc tgtttttgag aatgtttgaa
    10021 agaaataaac ttcttgaaag cagcatgctc attaccaata ttttccttgt gcaaaataga
    10081 atcaagctcg ctagcttttt cagagagcat gtttcttaaa atctgcattt tgccggagaa
    10141 gctctgtgtt tcaactgcaa tgagtttttc ttgcaaatct ttttgtacat cggcctgttt
    10201 ttttcgtacc catatttctt taacgccgtc aacaaagttt ttaccggcaa gccctaccgc
    10261 actcaaaaca aatacaccta atgcacctag aacgtttctc atattagggt cgcgtatcat
    10321 aagataggta acaaaatgag gctcattatt gatagcaacg tttttgggga tttctggaag
    10381 agttttccaa tcaggcaatt ttgccttgtg ttttgcagcg gaagcaagca ttatcataga
    10441 cccggcaagc acaccaaaaa gcgctgttgt tgccgcaaga agcggggtta aagttttggg
    10501 ttttgtattt ttttcttttt ttgttctgtt tctaaaatct atacgctcaa aactgtccgg
    10561 agtaattgtt ttgtcaggta taacaagatt gtcatacatg ttgcctatat tggggcagtc
    10621 ttgagagtct cgaattagag agttaacaac caccccctct ttcatttcag agatgttctt
    10681 tttttgagtt cttgtatggt ttctgtattg acgttgtgtt tcaacgtctt gatatggttt
    10741 tatatagctc atttgtcgtc acattccgtt tcttgttcgg ggttttcaat caattcaaac
    10801 aaagcttctt tagctgtatt aagctcaaac aaacgctttg cttcttctat tcttttttct
    10861 tcgtcatctt cttcnnccta ctagtccgaa caggttgaag attttctttt taatatcttt
    10921 gaatttttca tcaattttct tttgtatagc agcttttgcc tcgccaaaca tggcggtcaa
    10981 tttatcagct atttcaacaa atttttgttt tatttcattt agtgttttta tcacggtatt
    11041 tgcaatattt tgtactgtgt tagtaacagc ctgcagagcc tttgcaactg gcataagcac
    11101 agaatccgca aggactgtaa aagcttttat caggggtttt ggtaaagaag aatttattag
    11161 cgccagtttc attgcattta tttgctgctg aattttattc atataagcag ccatatcctg
    11221 cgctgcaaaa agctgttgtg tgtgtttgtg cgcggctttt tgtgctttca tcatttgcca
    11281 gacagcgtaa cattcgttgt aggacatttc tcttggcttg gtgttttttt taacgctgcc
    11341 gccaccaccg cccattccgt tacaaatggg acaagccccc atgggcaaac cgtgcgggca
    11401 cgtgcctatt ctattgttgg agcctctggc gactgttgct gccataaaaa attatccctg
    11461 tccttaattc cttggttaac tcggacaaga acacggatat ctgtagcagt gctaaaaata
    11521 tgaccccatg cctgatgccc gaagcaatgg tattaataag tattccggct atacggctgc
    11581 ggctcagctg gggattttca cacccatttc cttgtttcat gattgtactt ttgacaaaaa
    11641 acagtgtcaa ttttatttgc gggtattttt ataaatcgtt atataactcg atgcttgagg
    11701 tgtctctgct ttgaaatcgt acgctctttg aataataaaa ccgcgttttt caaaaaacgg
    11761 tatgtcaata aaacaacggg aatccataat aattccgttt ttgtcttcgc ttgtataaaa
    11821 acctcttccg tgtttttcat aaacacaggt aaaaggtctg tattcaggga aataagcatt
    11881 gccgtttttg tctattttgt attcggtttt tgtttgagct gtggtttttg tcagcactgt
    11941 gctgattaaa accttgtccg tcataattat atagtcataa ccggaaagat catataaagg
    12001 tgcattttcc ggcaacagtg tatcaatttt gtaaccgtgg ctatttaaca tattgagaat
    12061 ataaaattta tccgaagctg ttgaaaaaag tgcaatcttt gagcctgccg gcattttgcg
    12121 gatatcgtct cttatgtagc acaaagcagc cttgccttca taacctatgt ataaagcaca
    12181 tcttatcttt tctcttgcct gagaaaaact cggtgattgt atcagaagtt ttgcaatatc
    12241 accaaactgt cttccgctaa ggtttacact cataattaaa aaatacgaca ttacataaaa
    12301 caaaattaat agcttgagga tatttgtttt tttcatgtaa gacaaagcta tcacaggaga
    12361 tgaaataaca atcaaaaatg tcaaaaatct tatactaaaa accatatatg ctatggaaaa
    12421 agaaagacaa aaaacattga taaaaaacat tgcagcaaaa gcacataggg cagtcagttt
    12481 tttgttgtgt ctttttacaa accctgcaac aacagctgca acaagagatg gcaaaaacac
    12541 cagaaagccc agtatacctg cacccacttt tacattgatg aacctgttat ttatctcatt
    12601 gtagtctgac atttcaacac ccagatcttg aggaatatgc aaaaatgcca gtattgcaag
    12661 ttttgcattt gttatgtgtt caccaacgta ttcactgtat ctaaagccgg aaaaatcaaa
    12721 aagcataaac atatagcgga tataatttgc aacaaaagct tttataccgc ctctaaaacc
    12781 gtgcacagcc ttggcagatt ccgagccaag cggatttgag taatctataa aattaagaat
    12841 atagttataa cttgaaaaca caagaaagtt taaagccaaa aaaccggcaa aagcaataag
    12901 cggcttgtaa aactcttttt tctgtgttct gtaagaaaaa taagccaaaa gcaaaaacac
    12961 accgggaaaa gctataatag caggtnnatt ttgtccccat tgcaagagca taaacaaggg
    13021 ctgcataaaa aatatttaga acactttttt cttttaaagc atacaaatat agcgttatac
    13081 aagaaagcac aagcccggca agcaatacat ctgtctcaag gctggaaatt tccgccatca
    13141 ctgatgcaaa agaagaaact ataaaaattg tccagagtat tcttcttttt gaaaaagaaa
    13201 aatattcaag aatattgtaa atactaaata ctgcaccgat gtatccaata aaggaaacaa
    13261 aaaacagtcc tatatcattt ttgaagaata acaaattcca aagataaatt atctcagaat
    13321 ttatcggcat aacaaggttt ctgtcatcag taatcacaaa atggttcaaa ctgccctgat
    13381 gcagccaata agacgccctg ttcaggtgat aagtaagcgc atctccgcca gaaacaggca
    13441 taatgcaatc cagtatcacg acagcagcca tataaaaaac aaaaccaaac gccattatca
    13501 tgaggatttt atcttttttt aaggccccca aaatatcctc aaatgttttt ttcacgcgag
    13561 gaacatataa aggtctgcct tttttcagcc acaaacaaat tgaaagcgta aggaaaaata
    13621 tatttaaaac aagcacgcct gttttgctta tggctttgaa taatgacaaa agctcaaaag
    13681 tcagcactac ttgagcaaac attgtaatca aggtatacaa aaagcctgaa ggaccgcagg
    13741 gtttgtgatt tttgtctttt gtacaaaaaa cagaagcaca caaataagat gaaacaaata
    13801 ccattaaaag agatataaaa aataacatat tccactgctc catattcttt ttattaaaat
    13861 tatatcccaa ataataaaga tttttataca ggcgggtaat tttaaaaact ggaacaattg
    13921 aataatataa aactgtgcat attccactct cactcgtaaa ctgtttactt tatggctgct
    13981 tttaacaata aaagcggctt tttattttat tttttttaat tggaattatc cacataaagt
    14041 cttttgtcat taatcaattt atcaacattt aaaatgttgt aaacctgatt atcaataaat
    14101 gcttctgcct gaataaacat attatctaaa gccatatcat tttttacttc catcgactct
    14161 tttgcaatat tgataatatt aacaatatca tctacaagca gcgcaagctt gagttcggaa
    14221 gactcgagca caataatttt tttgtcagac aattcatcac acagtctttc agagttctta
    14281 tcttccagtc ctataaattt tttcaaatcc attacagtat aaaagttacc tttgtggtta
    14341 attactccgg ttatataaga gggagtgtat ggaatttttg taacgggata atttttaaca
    14401 ttgataagct ctttgacaaa aagagaataa acacaataag tatgattgtt gagatgaaaa
    14461 acaatatact gatctttgcc gtacacagct gcatccagag tcattacagg gatttttgct
    14521 atatcattgc gtcttt
//
LOCUS       DABS01000038            4860 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13668, whole genome shotgun sequence.
ACCESSION   DABS01000038 DABS01000000
VERSION     DABS01000038.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4860)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4860)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4860
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            11..718
                     /gene="minD"
                     /locus_tag="CPT85_01525"
     CDS             11..718
                     /gene="minD"
                     /locus_tag="CPT85_01525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018212429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="DAB26460.1"
                     /translation="MGLRNLDLLLGLENRIVYTLVDVVEERCKLKQALVKDKKNPNLC
                     LLAAAQTRDKSAVTADQLKEICEQLQKDFDFVLVDCPAGIEEGFKTAVSGASEAVVVT
                     TPEMSAVRDADRIIGLLEANDSIKSYKLLVNRVRPGMIEANDMMSVDDVCDILSCDLI
                     GIIPEDTGIITSTNRGEPIVNDENSLAGKAYLNAAKRIQGEEVPFLNIDEPKGFAAFI
                     AKVKNFLGINKKADKQD"
     gene            734..1336
                     /gene="minE"
                     /locus_tag="CPT85_01530"
     CDS             734..1336
                     /gene="minE"
                     /locus_tag="CPT85_01530"
                     /inference="COORDINATES: protein motif:HMM:TIGR01215"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="DAB26456.1"
                     /translation="MSENIFSNFYNKVLSFFQKDKEDNSESAKDTATNRLKLVLMQDR
                     SNLDGATMQKMREQLICVISKYIEIDQEALDLNLEADGDEIALMLNIPVIRARTREEI
                     EELEKQERLEQEKAKEKSDSENDENSQECDENEQDSSTESDNSEQDEEENKTEESQEP
                     ENNENVEDRDESKEAETSTEESDNNTDSDEEKKSKKTKNK"
     gene            1378..1827
                     /locus_tag="CPT85_01535"
     CDS             1378..1827
                     /locus_tag="CPT85_01535"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26457.1"
                     /translation="MSDERYQPRVRNAGTKNSIQIGYDTEKLKQENRYRVKGQAFPKT
                     INGFNWGAFLLTPVWGLFNNTPIACFCIILYLIPYLGILLGIVFSIYCGIQGNVWAWE
                     NKEWKDHFHFHETQRKWAIAGLITYIIIIAVLHIVTINMIQNFKSGY"
     gene            1899..2465
                     /locus_tag="CPT85_01540"
     CDS             1899..2465
                     /locus_tag="CPT85_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011761666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="DAB26458.1"
                     /translation="MDLLTLIIVGVVVVAVIGLYAIYAGVIKNKNAVREALSGIDVQL
                     KKRHDLVPNILTIAKKFMEHEKEIFEKVTELRTQAMKAPSGSKAKFAAEGMLDNLMGQ
                     LMVSVENYPQLKSDQTMVQAMKTYNEVEEHISAARRFYNSALTQLRNSVMIFPGSLFA
                     GLAAEEMNYSYFEATEADRAAVNANQYL"
     gene            complement(2562..4838)
                     /locus_tag="CPT85_01545"
     CDS             complement(2562..4838)
                     /locus_tag="CPT85_01545"
                     /inference="COORDINATES: protein motif:HMM:PF00534.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26459.1"
                     /translation="MVKPAGKNFSVDAFRNGISSYAQWKISTAATDRIYGRHPWPQMD
                     HINAWMVTAETDKFMSVGGLGKVAADLPNSFNKQFKNGEDKMINITPMYTDKNKKIIS
                     KDGKMFYQYAAKKVKDPKTNEEHIVSKKIEITPVGTVNVPVYNPSLNSKTEDTLVNIY
                     KAYADYTKDDLGYPKNDGTYYYFLDTPATRVDENGKTVKNAQIFNVEDRDPSNPNNGT
                     PYANNIFGTDEIFRMAFFSKAVYEMMKNAKEGKLKDIEAPNSVLLNDWHAGSLAAMIN
                     YTANAEADTGRMSKEAGVYFDKLPIIYIAHNVEHQGSTNNDDNKRTSIFATLFGGYSV
                     DILQNAYNWRPADDKYKPKETDACALMKGNGFSSAMTGMSLSDRVVPVSEHYGYELTA
                     SNVKANGLMDLMKARAFGEGHTMTPITNGYSKALIAPTKEHMDKVFNETKLDFTLNGL
                     QSIDFSNIKLLPYEDGNLENKLHNKNAVMDIFKQTIEREKRLMSQGDYGPRKYLLHDP
                     FHTDISSIKDFSNTPVIAYSGRVDAQKGLDSIFKDAMWKFVSHNLYTPKEKLPVFVIG
                     GKIANTESYNSLAYDLKDELMRKSKTESDPVKRQGYKNIAERIILINGFVRTDLVAAA
                     ADLFLVPSKFEPCGLTQLEAMAKGALPIATSTGGLVNTIKDNVDGFRTEEFYDIEDGW
                     RTTTKLYGDKNKPNKFASNGDAYCEAMERALNVYYNDHNRFEQMQKTAMQNDFSWDKK
                     GGALDKYISLIKTGRISA"
BASE COUNT         1562 a          855 c          950 g         1493 t
ORIGIN      
        1 tgacacagat atagggttaa gaaaccttga cttgctttta gggttggaaa accgtatcgt
       61 ttacacactc gtagacgtag ttgaagagcg ctgcaagtta aaacaagcac ttgtaaaaga
      121 caaaaagaac ccgaaccttt gccttttggc agccgctcaa acaagagaca aatcggctgt
      181 aacagcagac cagcttaaag aaatctgtga acagctgcaa aaagattttg actttgttct
      241 tgttgactgt cctgctggta ttgaagaagg ctttaaaaca gcggtatcag gtgcttcgga
      301 agctgttgtt gtaacaacac cggaaatgtc tgcagtaaga gatgctgata gaattatcgg
      361 tcttttagaa gcaaatgaca gcataaaatc atacaaactg cttgttaatc gtgtaaggcc
      421 gggtatgatt gaagcaaatg atatgatgag cgtagatgac gtatgcgata ttttatcttg
      481 cgatttaatc ggtataatcc ccgaagacac cggcatcatc acatctacga acagaggaga
      541 gcctattgta aatgacgaaa actctcttgc aggcaaagca tacctcaatg ctgcaaaacg
      601 tatacaaggt gaagaagttc cattcctgaa cattgatgaa cctaaagggt ttgccgcatt
      661 tattgccaaa gtaaaaaact ttttgggcat aaataaaaaa gcggacaaac aggattagga
      721 aaggagcaaa gacatgagcg aaaatatatt cagcaatttt tacaacaaag tcttgagctt
      781 cttccaaaaa gataaagaag acaactctga aagcgcaaaa gatacagcta caaacagact
      841 taaacttgtt ttaatgcaag acagatcaaa tcttgacggt gcaacaatgc aaaaaatgag
      901 agaacagctt atttgcgtta tttctaaata tattgaaatt gatcaggaag ctctggattt
      961 gaatcttgaa gcagatggtg atgaaattgc acttatgctt aatattcctg ttatcagagc
     1021 gagaacaaga gaagaaatag aagagcttga aaagcaagaa aggcttgaac aggaaaaagc
     1081 taaagaaaaa tcagactctg aaaacgatga aaatagtcag gagtgtgacg aaaacgaaca
     1141 agactcttcg acagaatctg ataactctga acaggatgaa gaagaaaata aaacagagga
     1201 atctcaagaa cctgaaaata acgaaaatgt tgaagacagg gatgaatcaa aagaagctga
     1261 aacttcaaca gaagaatctg ataataatac agattctgat gaagagaaaa aatctaagaa
     1321 aacaaaaaat aaataatctg ctatactgtt tttattaaac aaaaaggtat atcacagatg
     1381 tcagatgaaa gatatcaacc gagagtaaga aatgccggta caaaaaacag tatccaaatc
     1441 ggttatgata cagaaaaact gaaacaagaa aacagataca gagttaaagg acaggcgttt
     1501 cccaagacca ttaacggttt taactggggc gccttcctgc ttacaccagt atgggggttg
     1561 tttaacaata ctcctatagc ctgtttttgc ataattttgt atcttatacc gtaccttggc
     1621 atattgcttg gtatagtatt ttcaatttac tgcggcattc agggcaatgt gtgggcctgg
     1681 gaaaataaag aatggaaaga ccattttcac tttcatgaaa cacagcgaaa gtgggcaatt
     1741 gcagggctta ttacttatat tataatcata gctgttctac atattgttac aataaatatg
     1801 attcaaaatt ttaaaagcgg gtattaatat aaacagatga taatagcaca ttttaaatat
     1861 gctattatct acgtagtgat ttaaaatagg agaaaatgat ggatttactt actctcatta
     1921 ttgtcggtgt agtagttgtt gcagttatcg ggctatatgc tatttatgca ggtgttataa
     1981 aaaacaaaaa cgctgttaga gaagctcttt cgggtattga tgttcaactc aaaaaacgtc
     2041 acgaccttgt acctaatatt ttgactattg caaaaaaatt catggagcac gaaaaagaaa
     2101 tcttcgaaaa agtaacagaa ttaagaacac aggcaatgaa agcaccttcc ggctcaaaag
     2161 caaaatttgc agcagaagga atgctcgaca acctgatggg acagttgatg gtttctgtag
     2221 aaaactatcc tcaattgaaa tctgaccaga caatggttca agcaatgaaa acatataacg
     2281 aggtagaaga acacatctct gctgccagaa gattctacaa ctctgcgtta acacaattaa
     2341 gaaactctgt tatgattttc cccggttcat tatttgccgg acttgcagct gaagaaatga
     2401 attacagcta ttttgaagca accgaagcag acagagcagc tgttaatgca aatcagtatt
     2461 tataagaaca aatacaaaaa aataaaaagc aaagccggaa tattacaatt ccggcttttt
     2521 atatgttatc gtgcttattt aacgcactca tttttttaag attaggcgct aatacgtcct
     2581 gtttttatca ggctgatgta tttgtctaaa gccccgcctt ttttatccca gctaaagtca
     2641 ttttgcattg cagttttttg catttgttca aaacggttat ggtcgttgta gtagacattt
     2701 aatgctcttt ccatagcttc gcagtatgcg tcgccgttag aggcaaactt attcggttta
     2761 ttcttgtcac cgtacagttt tgtggttgtt ctccagccgt cttctatatc atagaattcc
     2821 tctgttctga aaccgtcaac attgtctttg attgtgttta caagaccgcc tgttgaagtg
     2881 gcaataggaa gtgcaccttt ggccattgct tctaattgag taaggccgca aggttcaaat
     2941 tttgaaggaa caagaaacag atcagcagct gcggcaacca ggtctgttct gacaaagccg
     3001 ttgattaaaa taattctttc agcaatattt ttgtaacctt gtctttttac agggtctgat
     3061 tctgttttag attttctcat taattcgtct tttaagtcat atgcaagtga gttataagac
     3121 tctgtatttg caatcttacc gccaataaca aaaacaggta gtttttcttt tggggtgtat
     3181 aaattgtgcg aaacaaactt ccacatagca tctttaaaga ttgaatcaag gcctttttga
     3241 gcatctacac ggccggaata tgcgattaca ggagtgtttg aaaaatcttt aatagagctt
     3301 atatccgtat ggaaaggatc gtgcaaaaga tattttctag ggccgtagtc accctgtgac
     3361 atcagtcttt tttctctttc aatagtttgt ttaaaaatat ccataactgc atttttgttg
     3421 tgcagtttat tttcaagatt accatcttca taaggcaaaa gttttatatt ggaaaaatca
     3481 atagattgca aaccgtttaa ggtaaagtca agttttgttt cattaaagac cttatccata
     3541 tgttcttttg tcggagcaat aagagctttt gaatacccgt tggtaatagg ggtcatagtg
     3601 tgaccttccc cgaatgctct tgccttcatc agatccataa gaccgtttgc ttttacatta
     3661 gaagctgtaa gctcatatcc gtaatgttca gaaacgggta caactctgtc agaaagagac
     3721 atgcctgtca ttgcagagct aaaaccgttg cctttcatca aagcacaggc atctgtttct
     3781 tttggcttgt atttatcatc agcaggtctc cagttgtagg cattttggag aatatccacg
     3841 ctgtaaccgc cgaataatgt ggcgaatatg cttgttctct tgttgtcatc attgtttgtt
     3901 gagccctggt gctctacatt gtgggcaata tagattatag gaagtttatc aaagtaaaca
     3961 cctgcctctt ttgacattct gcctgtatct gcttcggcat ttgcagtata gttaatcatt
     4021 gcagcaagag agcctgcgtg ccaatcgttc aataatacag aattaggtgc ttcaatatct
     4081 tttagcttac cttcttttgc atttttcatc atttcataaa ctgcttttga gaaaaatgcc
     4141 atcctgaaga tttcatccgt accaaaaata ttatttgcat aaggagtgcc attgtttggg
     4201 ttggatgggt cacggtcttc tacattgaat atctgtgcat tttttaccgt tttgccgttt
     4261 tcatcaaccc ttgttgcagg agtatccaga aaataatagt aagtaccgtc atttttgggg
     4321 taacctaaat catctttagt atagtcagca taagctttat agatgtttac aagagtatct
     4381 tcggtctttg aatttaatga tggattgtac acaggaacat ttaccgtacc aacaggtgtg
     4441 atttctattt ttttagaaac tatatgttct tcgttagttt ttggatcttt tacttttttg
     4501 gcagcatatt gatagaacat tttgccgtct tttgaaatta tctttttatt tttgtcagtg
     4561 tacatcggtg tgatatttat cattttatct tcaccgtttt taaactgttt gttaaagctg
     4621 tttggcaaat cagcggcaac tttacccaga ccgcctactg acataaattt gtctgtctct
     4681 gctgtgacca tccaggcatt aatatgatcc atctgaggcc agggatggcg tccgtaaata
     4741 cggtcagttg cggctgtgct tattttccat tgagcgtatg aagaaattcc gttacgaaaa
     4801 gcatctacac taaaattttt cccagctggt tttaccattt ccggatgaat agggcgttga
//
LOCUS       DABS01000039            2807 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_20956, whole genome shotgun sequence.
ACCESSION   DABS01000039 DABS01000000
VERSION     DABS01000039.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(181..966)
                     /locus_tag="CPT85_01550"
                     /pseudo
     CDS             complement(181..966)
                     /locus_tag="CPT85_01550"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    795..818
                     /estimated_length=24
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1048..2337
                     /locus_tag="CPT85_01555"
     CDS             1048..2337
                     /locus_tag="CPT85_01555"
                     /inference="COORDINATES: protein motif:HMM:TIGR00089"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="DAB26447.1"
                     /translation="MKSYIIKTHGCKSNQLESAVIKEKLDNNGYVQATDPKKADIFIL
                     NSCSVTENADNEALRTVRHAKNINPSVITVLTGCSAQLHASELLKLPYVDIVLGNNDK
                     FNIIESLNVCKSEVTDIFKINDFNNQTIHNYSKTRGYLKIQDGCNNYCSYCTIPLARG
                     KSRSNDIENIIEQINIYSQIGIKEVVLTGIHIGQWGEDFSPSKQLYHLLYEIENTKIM
                     RYRLGSLNPLELNDELLQFLSKSDKFCQHFHLSLQSLTDSTLKSMNRHYTAKDCLILM
                     EKINNIFSLPFIGSDIIVGFPGETEEDFETTLNNAKNSKLSNIHVFPYSLRSNTKAAN
                     LPKHVSSAEKQRRAALLQSVAKDKYSSFIEQNIGTTAQVLIEKRPDKKTGLLKGVTKN
                     YLNVYIDSTDVSLHNTIANVKILNKEEADSRLICKLV"
     gene            2377..>2807
                     /locus_tag="CPT85_01560"
     CDS             2377..>2807
                     /locus_tag="CPT85_01560"
                     /inference="COORDINATES: protein motif:HMM:PF00795.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26448.1"
                     /translation="MDLKVLVVQNSAIIGNKNATLNNVDALLAPYKGKKFDIIVLPEV
                     FSVGWYCSCFPKEAEYIDNSITIDFLKNIAMSFNATVVGGSFIQKFKNNTYKNTCPVI
                     SAKGQLVTTYDKMHLFSHKGSEENKYISTGDELKILDLGFT"
BASE COUNT          998 a          497 c          460 g          828 t
ORIGIN      
        1 gcgccacagg cccgtgacgt cttttgttcc actggcctgt tgcggcagct gtgctacctt
       61 cctctcgtca gacgatactc aatcgtcttc ctcggcagag tgccacaggc ccgtggctac
      121 tttattaaaa taacatcaac aacaggcatg gtcaagcata tctttaaaaa ttaaataaaa
      181 ctattctttt tcaggcaaaa agctatttac agcttttaaa aaattataat tagtttgcac
      241 attttcgttt ctatttttat actctttgtt gtatctcatc aaaacagcta ttgccattgt
      301 aggaacaaga agcgctgctg tgattttgtt agcacctgcg agataaggtt ttttagcaac
      361 atagttttct gccggtttaa caattttttt gttgataata gaattattca aaaactcttt
      421 agacggtttc aaaacagaat ttttaagtgt tttaccaata gtggggaaac tgttttttgt
      481 atattcaaaa agatttttac ctgcattagt aacagcattg aaagcagtat ataacactgc
      541 aaaatcaatc attgtagatg caaaagcatg ctctttatta aatttatcca atgcatctga
      601 tttggagtta acaaatcgtt tgacagcatt taaagatgca gcaacagcaa aaacagcacc
      661 ccatttacct gcagttttag cagtactgga gagtttagaa gataactgac ctttttttac
      721 aagacctgtt gcaacagaat caattatcgg aatggtgaaa agcagtgtat taacagtctt
      781 ttgagaaacc ttttnnnnnn nnnnnnnnnn nnnnnnnnaa tcttcatcag aaagtttagt
      841 aacaacttga gagtcatcct gcgattctga aaactgcttg ccctgaaaac ttctcaaact
      901 ctttgaaggt gaatggtttt gagatttaga aaaataaata ttgttattta ttttagaaat
      961 agacatgcca tttaatccta tacaaaaatt atacaacaga aataattttt tgtttatatc
     1021 cttactttat gttaagtaat atttattatg aagtcataca ttataaaaac tcacgggtgc
     1081 aaatcaaatc agctggagtc agcagttata aaagagaagc tggacaataa cggttatgta
     1141 caggcaactg acccgaaaaa ggccgatatc ttcatattaa actcatgctc tgttacagaa
     1201 aatgcagaca atgaagcgct tcgaacagta aggcatgcaa aaaacataaa tccttctgta
     1261 ataactgttt tgacaggctg cagcgcacag ctgcatgcct cagagctttt aaaattgcct
     1321 tatgttgaca tagttttggg aaataacgat aaatttaata tcattgaaag tcttaatgtt
     1381 tgcaaaagcg aagttactga tatttttaaa ataaatgact tcaataacca gactatacac
     1441 aattattcaa aaaccagagg atatttaaaa attcaagacg gatgcaacaa ctattgcagt
     1501 tattgcacaa ttcccctggc aagaggcaaa agcagaagca acgacataga aaatattatt
     1561 gaacaaataa atatttattc tcaaatcggc ataaaagaag tcgtgttaac aggtattcat
     1621 attggacaat ggggtgaaga tttcagccct tcaaaacagc tgtatcacct gctttacgaa
     1681 attgaaaata caaaaatcat gcgatacaga ctcggttctt taaatccgct ggaacttaat
     1741 gacgagctgt tgcaattctt gagcaaatct gataagttct gccaacattt tcatctgtca
     1801 ttacaatcat tgaccgatag cacattaaaa tcaatgaata ggcattatac agcgaaagac
     1861 tgtcttattc taatggaaaa aatcaataac attttttcac ttccttttat cggcagtgac
     1921 ataatagtag gattcccagg cgaaacagag gaggattttg aaactacact taataatgcc
     1981 aaaaactcaa aactctccaa tatacacgtc tttccatact ccttaagaag caacactaaa
     2041 gcagcaaacc tgccgaaaca cgtttcttcc gctgaaaaac aaagaagagc agcgcttctt
     2101 caaagtgtgg ccaaagacaa atactcatca tttattgaac aaaatatagg aacaacagca
     2161 caggttttaa tagaaaagcg ccccgataaa aaaacaggct tgctcaaagg ggtaacaaaa
     2221 aattatttaa atgtgtacat agattccaca gacgtctcac tacataacac catagcaaat
     2281 gtaaaaattc ttaacaaaga agaggcggat tcaaggctaa tttgcaagtt agtataaact
     2341 tctgcctgaa ctaagcattt gtaatataat taagaaatgg atttaaaagt actcgttgtt
     2401 caaaacagcg ctattatagg aaataaaaac gcaactttaa ataacgtcga tgctctttta
     2461 gcaccttata aaggcaaaaa attcgacatt attgtattgc cagaagtttt ttctgtcggg
     2521 tggtattgtt cttgcttccc aaaagaagct gaatatattg ataacagtat aactatagat
     2581 tttttaaaaa acatcgcaat gagttttaat gcaacagttg tgggtgggtc ttttatacaa
     2641 aaattcaaga ataacactta caaaaacaca tgccctgtaa tatcagcaaa ggggcaatta
     2701 gtcacgactt atgacaaaat gcatcttttt tcccacaagg ggtctgaaga aaataaatac
     2761 atctcaacag gagacgagtt aaaaatcctc gatttaggtt ttacaaa
//
LOCUS       DABS01000040            7712 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_23200, whole genome shotgun sequence.
ACCESSION   DABS01000040 DABS01000000
VERSION     DABS01000040.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7712)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7712)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7712
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            106..768
                     /locus_tag="CPT85_01565"
     CDS             106..768
                     /locus_tag="CPT85_01565"
                     /inference="COORDINATES: protein motif:HMM:PF00072.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="DAB26439.1"
                     /translation="MKSISVLMVEDHKLLRVGLRSLFNESDDIKVIAEAETGKEAVEK
                     AKVMSPDVILMDIGLPDISGIEATKRILANNLEQKVMMLTSHIDEKEVMDSLSAGAYA
                     YVLKDINTEFLIMVIKSVSQGAIWLDPQIVPLIRDKSSCFIPQKQNSRAAFRAQHGNL
                     TEREYEVLKLVVDGQSNAEIASTLTISEHTAKAHVCNIIQKLVVDDRTQAAVKAIKEG
                     LV"
     gene            complement(765..1775)
                     /locus_tag="CPT85_01570"
     CDS             complement(765..1775)
                     /locus_tag="CPT85_01570"
                     /inference="COORDINATES: protein motif:HMM:PF00766.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit alpha"
                     /protein_id="DAB26440.1"
                     /translation="MKLTNVRQIMTNQTLVFIELNNGHVQKVSKEIISHAINNFENTE
                     VNGLVIADNKSVQLAQEELKTLGLKRLYVLEDNLFDRHNTCIFADIAAKFIQENNPDI
                     LLMGATCDGRDLAPRIASKLNAGLTADCTDLKLDENGKLLATRPTYGGKMMATIISKT
                     VPNFATVRQGAFKLKDINTNYETEIISINPELSGMCSLIEILYSEDKPPQEDWTCAEI
                     IVAGGLGLKNKENFDLIYKFSSLLGAKPAASRAAVEQGWAPQSIQVGQTGSSVSPKLY
                     IAFGISGAMQHLVGISNADKVIAINTDKNAPIMKSADSALVGDAAGVLNTLISDIENR
                     SN"
     gene            complement(1741..2541)
                     /locus_tag="CPT85_01575"
     CDS             complement(1741..2541)
                     /locus_tag="CPT85_01575"
                     /inference="COORDINATES: protein motif:HMM:PF01012.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta"
                     /protein_id="DAB26441.1"
                     /translation="MVFKIAVFIKQVPDTTDIRWTEHNTIQREGLDSVINPFDLGAIQ
                     LAKNVKFLNKETEITAVTMGPPQAEAALKQAIAMGCDRGILLSDKKFSGADTLATAYT
                     LSQFIKTCMPDVDLIICGQQAVDGDTAQTPTSMAEKLSLQQITNVIALKEFHPDYAVW
                     IKDTCSYKQEIKAPFPCLVAANIKDLDILPDINGYIKSQNTEINVLCSDDINADIQCI
                     GLKGSPTQVKNAYRPFIERNTQLIENESVQNYAEFIINEINKCKADND"
     gene            complement(2541..3391)
                     /gene="nadC"
                     /locus_tag="CPT85_01580"
                     /pseudo
     CDS             complement(2541..3391)
                     /gene="nadC"
                     /locus_tag="CPT85_01580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015360337.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide diphosphorylase
                     (carboxylating)"
     assembly_gap    3052..3053
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3369..4997)
                     /gene="nadB"
                     /locus_tag="CPT85_01585"
     CDS             complement(3369..4997)
                     /gene="nadB"
                     /locus_tag="CPT85_01585"
                     /inference="COORDINATES: protein motif:HMM:TIGR00551"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="DAB26442.1"
                     /translation="MPMKHSTYSVIIVGSGIAGLYAAIKLSETKHLPDGILLLTKSQL
                     AECNSRYAQGGIVGVLPENKADSISLHIADTIKAGCGLCDFNVVKFISENSNRAIKDL
                     MKYGVEFDRNDKKQLNFTLEGAHSVRRILHVGGDATGYGIEKALVNKVKNDPAIASNI
                     TIYEQTLAIDLLVDSKNNCRGVISFNDLTKEYETVYAPITILATGGTGQVYKYTTNPS
                     VTTGDGLALGIRANAKIKDMEFIQFHPTALSLDNNDSRFLISESVRGEGAKLVNQKGE
                     YFMENHPQKDLAPRDVVAREIYSQLSKGNKVFLDATFIDIDKFKTRFPNIYKSCMDNN
                     IDVTKDFIPVSPAAHYCMGGIKTEINGKTSVNNLYAIGEVACTSLHGANRLASNSLLE
                     CVVCAFELVNTINKQTLTPSNIIDESVLTTIKKYSPENDMDDTDFDCKKLSSELRDLM
                     WNKVGIVRTEASLLDALSELNKIEQQEIFKDKCNSIEEYELRNMLYVAKCIINSALKR
                     KESIGAHYRADSETKDIKHDMHTEDKSDESKITA"
     gene            5169..5420
                     /locus_tag="CPT85_01590"
     CDS             5169..5420
                     /locus_tag="CPT85_01590"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26443.1"
                     /translation="MINQATNYLPVQQAAVQQQMQQGTAPVVQQLQTVPPKAPEYNAI
                     KIDIVKPQVQTAQDPVYSMPFNPIYTYPPSELPESQAKN"
     gene            5592..6662
                     /locus_tag="CPT85_01595"
     CDS             5592..6662
                     /locus_tag="CPT85_01595"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26444.1"
                     /translation="MIQAPLPVNYAAPAAPIQQPAPEYNAIKINIVEPKVNAPGSQQP
                     AQSVYGYPQAPIYNYPQATQAPVYYPPVQTAPVQQQGQVIMTPAPAQTVPVSVPAPQV
                     INQQTINQVPPSVIEPEAPKAEEVKAPEAPVEAPKTEPQAATINVPAFTQRIKADDLA
                     DAGKAIEEVADIAQTQPEAASQLLDTDLMEALLGVIGKDSSTLEGPSDRQKELRQQVL
                     EGKQLSEADMAEANKITPLEMAERNKQYALFTTAILQNSLIDEFKKTNNITPDIKDLP
                     GMEQIVTTIKDNPNPMLRASGLAALAYNARPEYKSVMKEIFELSKQDADENVQKVAEE
                     GLAKLATVMDAPAATEAPSQAA"
     gene            complement(6729..7301)
                     /locus_tag="CPT85_01600"
     CDS             complement(6729..7301)
                     /locus_tag="CPT85_01600"
                     /inference="COORDINATES: protein motif:HMM:PF13202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26445.1"
                     /translation="MNNSGNNPIADLFINDDGTVDRALIIAMGGNMSLGGNYTISTGA
                     LIHNLYTMDADRDGIVTKEEVAKFKESQTYKLVSYNVMMSEMERSNDNTGNFDEIFVL
                     EDIEKFVKNNPTATKEQKEFFSLITDINDLNLKKFIMRALGSGAESTTVSQFTSKCDK
                     NGDGIVSYDELKEFIDETTKLYNSLNTLFK"
     gene            complement(7298..7705)
                     /locus_tag="CPT85_01605"
     CDS             complement(7298..7705)
                     /locus_tag="CPT85_01605"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26446.1"
                     /translation="MSDVFVSVGVDLPENSSNIIAQNSKDLNYRNIIIGAIFRALKGE
                     EIDTPISDDDIVAMKTDKQQGLSIDELLALDKNGDGSIADELQKILTDDQFLDTCKFM
                     LQREKNHETNNESIMKMDLDKNSXIQKYQLVKF"
     assembly_gap    7330..7331
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         2403 a         1495 c         1272 g         2538 t
ORIGIN      
        1 taaattaaaa aaatatatta tacatttata atttttggtg atgtagtttc aatcagctta
       61 aattatattt taattagaaa atttcgagtg agagaggaat ctgttatgaa atctatatcg
      121 gttctaatgg ttgaagacca taaactgcta agagtcggat tgcgttcact gtttaatgaa
      181 tctgacgaca taaaggttat agccgaggcc gaaaccggta aagaggctgt agaaaaggca
      241 aaagtaatga gtcctgatgt aatactgatg gatatagggc tgccggatat ctccggtata
      301 gaggcaacaa agcgtatttt ggccaataat ttggagcaaa aggttatgat gcttacatca
      361 catattgatg aaaaagaggt catggattcg ctcagcgccg gcgcttacgc ctatgttcta
      421 aaggatataa acacagaatt tcttataatg gtaataaaat cagttagtca gggtgcaata
      481 tggctggatc cacaaatagt gccgttaatt agagataaat catcctgttt tatccctcaa
      541 aaacaaaact cccgtgctgc attcagggca caacatggca atttgaccga aagagaatat
      601 gaagttttaa aacttgttgt tgatgggcag tcaaatgccg aaatagcaag cactttaaca
      661 attagtgagc atacagcaaa ggctcatgtt tgcaatatta tacaaaaact tgttgttgac
      721 gatagaacac aagctgcagt aaaggcgata aaagaaggat tggtttaatt acttctgttt
      781 tctatatctg atatgagagt atttaaaact cctgcagcgt ccccaacaag agcagaatcc
      841 gccgatttca taatcggcgc gtttttgtct gtattaattg ctataacttt atcagcattg
      901 ctaatcccta caaggtgttg cattgcaccg gatataccaa aggcaatata taattttgga
      961 gaaacagagc ttcctgtttg acccacctga attgactgag gggcccaacc ctgctctact
     1021 gcagctcttg atgctgccgg ttttgctcca agcagtgaag aaaatttata aatcaaatca
     1081 aagttttctt tgttttttag cccaagtccc cctgcaacaa taatttctgc acaggtccaa
     1141 tcttcctggg gcggtttatc ttctgaataa agaatttcta taaggctgca cattccagat
     1201 aactccgggt taatacttat tatttccgtc tcataatttg tgtttatatc ttttaatttg
     1261 aatgcacctt gtctaacagt ggcaaagttt ggcactgttt ttgaaataat tgttgccatc
     1321 attttgccgc cataggttgg ccttgttgct agtagcttac cgttttcatc aagctttagg
     1381 tctgtgcaat cagcagtcaa acctgcattt agctttgatg caattctcgg agccaaatcc
     1441 ctgccgtcac atgtagcacc catcaaaagg atatcggggt tgttttcctg tataaatttt
     1501 gctgctatgt ctgcaaaaat acaggtatta tgtctgtcaa aaagattatc ctcaagaaca
     1561 taaagtcttt ttaatcccaa tgttttaagc tcttcttgag caagttgcac ggatttattg
     1621 tctgctataa caagtccgtt tacctctgta ttttcaaaat tattaattgc atgcgagatt
     1681 atttcttttg aaactttttg cacatgcccg ttattcaatt caataaaaac aagtgtctga
     1741 ttagtcatta tctgccttac atttgttaat ttcatttata ataaactctg catagttttg
     1801 tacggattca ttttctatta gctgtgtgtt gcgttctata aaaggcctgt aagcattttt
     1861 aacctgagtt ggcgagcctt ttaggccaat gcattgaata tcagcattaa tatcgtcaga
     1921 gcacaatacg tttatttccg tattttgaga cttgatgtaa ccgtttatat caggaagtat
     1981 atctaaatct tttatatttg ccgcaacaag gcatggaaac ggagccttaa tctcttgttt
     2041 gtatgagcat gtgtctttta tccacactgc ataatcgggg tgaaactctt taagagcaat
     2101 aacatttgtt atctgctgca aagatagttt ttctgccata gaagttggcg tctgcgccgt
     2161 atcaccgtcc actgcttgtt gaccgcatat tattaaatca acatccggca tgcatgtttt
     2221 tataaattga gacaaggtat acgctgttgc cagagtatca gctccggaaa actttttgtc
     2281 cgacaacaga attcctctat cacaacccat tgctatagct tgttttaatg cagcctctgc
     2341 ttgtggtggc cccattgtaa cagcagttat ttctgtttcc ttatttaaaa atttaacgtt
     2401 ttttgcaagc tgtatagccc ccaaatcaaa ggggtttatg acagaatcaa ggccctctct
     2461 ttgtatggtg ttgtgttctg tccacctgat atcagttgta tctggaacct gttttataaa
     2521 tactgcaatt ttaaaaacca ttaagaaata tccaatccta aatctaacac aggagcctgt
     2581 gctactatag cgcttgttga tattacatct actcctgtag aggctatctc atttatggta
     2641 tttattttaa catttccgct ggcttccaca atagctcttt tattgataaa atctacacaa
     2701 tttttcatgt cggctattgt catgttgtct aacattatta tgtcacaacc tgcactgaca
     2761 gcttcttgta cttgagcaaa tgtatcacat tccacttcaa ttttatgagc atgagaaagc
     2821 tcttttttaa tcatattgac ggcattagtg atagacccag catgctttat gtgattatct
     2881 ttaatcatca cacaatcaca aaggttaaat ctgtgaagtc ttgcaccgcc cgtcataaca
     2941 gcatatttct cgaacattct aaagccgggt gtattcttgc gtgtatctgt aacagatgct
     3001 ttgtaaggct taattgcttc ttggtatttt cgggtttcag tagcaatacc gnnccggaca
     3061 ttctttgtac atagtttaat gcagttcttt cgcctgtaag aactgccctt gccggacctg
     3121 taattttagc aatagtacta ccttttggtg caaagtcacc atctttgtat aacatttcta
     3181 tttgtacttt gtcagaaagc agctcaaaaa cctttttaaa gatattcaac ccgcaaataa
     3241 cagcgtcaac ccttgtatta aggcatgctg ctattgtatc ttcctctttg tacaaaaaat
     3301 ctgttgtaat atcgccaaaa ccaatatcct ctttaagtgc attttttata tgttcttcaa
     3361 caataaaatc atgcagtaat ttttgattca tcagatttgt cctcagtgtg catatcatgt
     3421 ttaatatctt ttgtttcaga atcagctctg tagtgtgcac ctattgattc tttacgtttt
     3481 aatgcagaat taatgatgca ttttgctaca tacaacatat ttcttagttc gtactcttct
     3541 atagaattac atttgtcttt aaaaatttct tgctgttcaa ttttattcaa ttcggacaaa
     3601 gcatccagta aagaggcttc tgttcttaca atacctactt tattccacat taaatctctt
     3661 aattctgagc tcaatttttt gcaatcaaaa tccgtgtcat ccatatcatt ttcaggtgaa
     3721 tattttttta tagtggtcaa aacagattca tcgataatgt tagatggcgt caatgtttgc
     3781 ttgtttattg tattaacaag ctcaaatgcg cagacaacgc actcaagcag tgaattgctg
     3841 gccagtctgt ttgcaccgtg caatgatgtg caggccactt cacctatagc gtacagattg
     3901 tttacagaag tttttccatt aatttctgtt tttataccac ccatgcaata gtgtgcagca
     3961 ggagaaacgg gaataaaatc ttttgtaaca tctatattat tgtccatgca gcttttatag
     4021 atattaggaa atcttgtttt aaatttatca atatcaataa aagttgcgtc caaaaatacc
     4081 ttattgcctt ttgaaagttg cgagtatatt tctcttgcaa caacatctct gggtgcaaga
     4141 tctttttgag ggtgattttc cataaaatat tcgccctttt ggttaacaag tttggctcct
     4201 tctcctcgaa cagactctga tataaggaat cttgaatcat tgttatctaa ggataaagca
     4261 gttggatgga attgaataaa ctccatgtct ttaatttttg catttgctct aatgccaaga
     4321 gccaagccgt caccggtcgt tactgatgga tttgttgtat atttgtatac ctgtcctgta
     4381 ccacctgtag ccagaatggt tattggtgca tacacggttt catattcttt ggtcaaatcg
     4441 ttaaatgaga tgacaccacg gcaattattt tttgaatcaa caagcaaatc aatagcaagt
     4501 gtttgctcgt aaattgtgat atttgatgct atagcaggat cattttttac tttgtttaca
     4561 agagcttttt caataccata acctgttgca tctccaccaa catgaagaat tcgtcttacg
     4621 ctgtgtgcac cttccaaagt gaaattaagc tgttttttgt catttctgtc aaactcaaca
     4681 ccatatttca ttaaatcttt tattgctcga ttactgtttt cagagataaa tttcacaacg
     4741 ttgaaatcac aaaggccaca gccggctttg attgtatctg caatgtgaag actaatggaa
     4801 tcagctttat tttccggcaa aacaccaact atgccgcctt gagcatatct tgagttgcat
     4861 tctgcaagct gagattttgt taacaaaaga attccgtcgg gaagatgctt tgtctccgac
     4921 aatttgatag cagcataaag accggctata ccgctaccta caataattac agaataagtt
     4981 gaatgtttca tcggcatgtt acctcttgct ataattttaa tacaaatagt ttttttttac
     5041 tactatctat gtagcgaaga aaaatgttaa cttttgttaa taaacacgcc aaatactaac
     5101 aaattttttt gtgttcgttt attaagcaaa tataatcaga aaagcctaca tctatcaacg
     5161 gaggaaaaat gataaaccaa gcaactaact atttgcccgt acagcaagca gcagtacaac
     5221 agcaaatgca gcagggaact gcacctgtag tgcagcaatt gcaaactgtt ccacccaaag
     5281 ctcctgaata caatgctatt aaaatagata tagtaaaacc tcaagtacaa acagcacagg
     5341 atcctgtata cagcatgcct tttaacccta tttatacata tcctccttct gagttacctg
     5401 aatcacaggc taaaaattaa ataattgatt aagcaacttg ttatacaatg ataagttgct
     5461 tttttaacat aatgagaatt agctcgttaa atcaaatgtt acaaattatt aaataatttc
     5521 aacaaaatag caattttgaa tcttcacatc tattaattaa gtatcaagaa aacattaata
     5581 aggggaaaaa catgatacaa gcacctttac cagtaaatta tgcagcaccg gcagctccta
     5641 tacagcagcc agctcctgaa tacaatgcta ttaaaattaa cattgtagaa cctaaagtta
     5701 atgcaccggg ctcacaacaa ccggcacaat cggtttacgg atatcctcaa gcacctatct
     5761 acaattatcc gcaagcaact caagcaccgg tttattaccc tccagtgcaa acagcaccag
     5821 ttcaacaaca aggccaggtt ataatgacac ctgctcctgc acaaacagtt cctgtatcag
     5881 ttccagctcc tcaagttata aatcaacaaa caataaatca agtacctcct tcagtgattg
     5941 aacccgaagc tccaaaagca gaagaagtaa aagctccaga agcacctgta gaagctccta
     6001 aaacagaacc tcaagcagca acaattaatg ttccagcctt cactcaaaga atcaaagctg
     6061 atgaccttgc tgatgcagga aaagctatcg aagaagttgc agatatagct caaactcaac
     6121 ctgaagcagc ttctcaatta ttagatactg atttaatgga agcattgctc ggtgttattg
     6181 gtaaagacag cagcacactg gaaggacctt ctgacagaca aaaagaatta agacagcagg
     6241 tattggaagg taaacaactt tctgaagctg atatggctga agcaaacaaa atcactccgt
     6301 tagaaatggc tgaaagaaat aaacaatacg cattattcac aacagctatt ttgcaaaact
     6361 cattaattga tgaattcaaa aagactaaca atataactcc tgacatcaag gatcttccgg
     6421 gtatggaaca gattgttaca actatcaaag acaacccgaa cccgatgttg agagcaagcg
     6481 gcttggcagc attagcttac aacgcaagac ctgaatacaa atctgttatg aaagaaatct
     6541 ttgaactttc aaaacaagac gcagatgaaa atgttcaaaa agtagcagaa gaaggactcg
     6601 caaaattagc tactgtaatg gatgcacctg cagcaacaga agctccttca caagcagcat
     6661 aactaaatag ttaaaaataa aaaagcagac tcaattttag agtctgcttt ttgttataaa
     6721 taaatacttt atttaaatag agtattcaaa gaattgtata attttgtagt ttcgtcaata
     6781 aattctttca attcatcgta agaaacaatt ccatcaccgt ttttatcaca tttagaagta
     6841 aattgtgaaa cagttgttga ctcagcgccg ctgcctaatg ccctcataat aaattttttc
     6901 aaatttaaat cattaatgtc tgtaattaaa gagaaaaatt ctttttgttc tttagtggca
     6961 gtaggattat tttttacaaa tttttcaatg tcttctaata caaatatctc gtcaaaattt
     7021 ccagtattat cattacttct ttccatttct gacatcataa cattatatga aacaagttta
     7081 taagtttgac tttctttaaa ttttgcgacc tcttctttag taactatgcc atctctatct
     7141 gcatccattg tatacaaatt gtgtattaaa gcacctgttg aaatcgtgta gtttccccca
     7201 agtgacatat ttccacccat tgcaataata agagctctgt ctaccgtgcc gtcatcgttt
     7261 ataaacaaat ctgcaatagg attatttcct gaattattca aaatttcact aactgatatt
     7321 tttgaatttn ngaattttta tccaaatcca ttttcataat tgattcatta tttgtttcat
     7381 gatttttttc tcgttgaagc ataaatttac aagtgtcaag gaattggtca tctgtaagaa
     7441 ttttttgcag ctcatcagct atactgccat caccgttttt atccaatgca agtaattcat
     7501 caatgcttaa cccttgctgc ttatctgttt tcattgcaac aatgtcatcg tcggatattg
     7561 gagtatcaat ttcttcacct tttagagctc taaaaattgc ccctattatt atgtttctat
     7621 agtttaaatc ctttgaattt tgcgcaatta tatttgacga attttcaggt aagtcaactc
     7681 ctactgacac aaacacatca gacaaaacct ta
//
LOCUS       DABS01000041            2503 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_23240, whole genome shotgun sequence.
ACCESSION   DABS01000041 DABS01000000
VERSION     DABS01000041.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2503)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2503)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2503
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            171..1382
                     /locus_tag="CPT85_01610"
     CDS             171..1382
                     /locus_tag="CPT85_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017721208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="DAB26339.1"
                     /translation="MENFGPDIFGRRDKEQDTETPQVSNVADIKVIGAGGGGGNAVNR
                     MIKAGLTGVDFWAMNTDAQVLKMSLAENKIQLGGKLTEGLGAGGDPSVGEKAAEETRD
                     QIVQALDGADMVFVTAGMGGGTGTGAAPVVAKIAKELGALTIGVVTKPFSFEGKRRMN
                     QAMQGLEKLKETVDALIVIPNDKLLEVVERRTTMKEAFQVVDEVLLRGVQGISDIITV
                     PGMINVDFADVKAVMQSSGSALMGIGRGTGEGRAMEAAKLAINSPLLETSINGASGII
                     MNVTGGSDMTLHEVTEAAQVIHDAIAEDAIFTFGSVIDDRIQGEIQITVIATGFEMKT
                     PDMGNKKEAVKSLSAADFFSGSFNTGSASATNSAPSLAPSTPQPKPAISPQKSQNDLM
                     SIIDIPPFLQK"
     assembly_gap    1454..1455
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1548..1817
                     /locus_tag="CPT85_01615"
     CDS             1548..1817
                     /locus_tag="CPT85_01615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_602679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="DAB26342.1"
                     /translation="MANIKSAKKRVLIAERNRLKNVAVKSEIKTAIRKTLELAQAKNE
                     AELKPAISHAYKLCDKAVSKGVLHKNTAARKKSRLTLAVNKLLAK"
     gene            complement(1887..2135)
                     /locus_tag="CPT85_01620"
     CDS             complement(1887..2135)
                     /locus_tag="CPT85_01620"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26340.1"
                     /translation="MTHQIIKVAWDLNENCENRYQLVYEIAELAKKLVDEYQMKKPKD
                     ELGFDDYGFDNSSIKKENPVEHAIMVKASESDESRLVG"
     gene            complement(2209..2463)
                     /locus_tag="CPT85_01625"
     CDS             complement(2209..2463)
                     /locus_tag="CPT85_01625"
                     /inference="COORDINATES: protein motif:HMM:PF13354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26341.1"
                     /translation="MVDYMSHVHNNRLIQAGLPSDAIFIHKTGDIGKMLGDAGIVYTP
                     NGKKYIVVMLVNRPYNSPQGKDFIVAASSLIYNYMVNTNL"
BASE COUNT          881 a          425 c          472 g          723 t
ORIGIN      
        1 atgatacatc ataaaaaaaa attgttaaga gaatctttaa cttatattaa aaaaagtatt
       61 aaaatatctt aattttattt actatttaat ttttttaaaa tagtataatt attaagttgt
      121 aataaaaata acctttcggt aaaaaagatt agattgaaag aggaaaataa gtggaaaatt
      181 tcggaccaga tatcttcggc agaagagaca aagaacaaga cacggaaact ccgcaagtat
      241 caaatgtagc agacattaaa gtaataggcg ccggcggcgg cggtggtaac gctgttaaca
      301 gaatgattaa agcaggcctt acaggcgttg acttttgggc aatgaataca gatgcccagg
      361 tgttaaaaat gtctttggca gaaaacaaaa ttcaattagg cggcaaatta acagaaggac
      421 tcggcgcagg cggtgaccct tcagttggtg aaaaagcggc tgaagaaaca agagaccaga
      481 ttgtacaggc acttgacggt gctgatatgg tgtttgtaac tgcaggcatg ggcggcggta
      541 caggtaccgg tgcagctcct gttgttgcca aaatagcaaa agaattaggc gctttaacta
      601 tcggtgttgt aacaaaacct ttcagctttg aaggtaaaag aagaatgaat caggctatgc
      661 agggtcttga aaaattaaaa gaaactgtag acgctctcat tgttatacct aacgacaaac
      721 tgcttgaagt tgttgaaaga agaacaacaa tgaaagaagc attccaggtt gttgacgaag
      781 tattgttaag aggtgtacag ggtatatctg acatcatcac agtacccggt atgattaacg
      841 ttgactttgc cgatgttaaa gctgtaatgc aatcaagcgg ttctgcttta atgggtatcg
      901 gaagaggcac tggcgaaggc agagctatgg aagctgctaa actcgctatc aattcaccat
      961 tgcttgaaac atctattaac ggtgcttctg gtattattat gaacgttaca ggcggttctg
     1021 acatgacatt acacgaagta acagaagctg cacaggtaat tcatgatgca attgccgaag
     1081 atgctatctt tacttttggt tctgttattg atgacagaat ccagggagaa attcaaatca
     1141 ctgttattgc aacaggcttt gagatgaaaa ctcctgatat gggaaataaa aaagaagctg
     1201 ttaaatctct tagtgcagca gatttcttct ccggttcatt caacacaggc agtgcttctg
     1261 caacaaacag tgctccttca ctggcaccaa gcacacctca accaaaacca gcaatttcac
     1321 ctcaaaaatc acaaaatgat ttgatgagca ttatagatat tcctccgttt ttacaaaaat
     1381 aacggatgta tataataaaa aaagacctga taaattcagg tcttttttat tgcatattga
     1441 aatcaaatat tatnnataat aatattactc accaaacctc attgcagatt tcagaggggg
     1501 ttggagtaaa taccgcccga agaaatgcaa atgaaaggaa aaaacaaatg gctaatatta
     1561 aatccgctaa aaaaagagtt ttaatcgcag aaagaaacag attgaaaaac gttgctgtaa
     1621 aatctgaaat caaaactgca atcagaaaaa ctttagaatt agcacaagcc aaaaacgaag
     1681 cagaattgaa acccgctatc agccacgcat acaaactgtg tgacaaagct gtttctaaag
     1741 gtgttttgca caaaaacact gctgcaagaa aaaaatcaag attaactctt gctgttaaca
     1801 aattgttagc aaaatagtta ataaattggt ttaaaaaaag ctctctaaat tagagagctt
     1861 ttttgttgaa agaaaatttt tatttattaa cctacgagtc tgctttcgtc agattcggaa
     1921 gctttaacca taatggcatg ctcaacagga ttttcttttt taatagagct gttatcaaaa
     1981 ccataatcat caaagcccaa ttcatcttta ggctttttca tttgatattc atcaacgagt
     2041 tttttagcaa gttctgcaat ttcataaacc agttgatatc tgttttcgca gttttcgttg
     2101 aggtcccacg ctactttaat tatttgatga gtcatatttt tctccgaata ttctaaaatt
     2161 cactatatat aaactataat ataagaacaa cgcaatatca atacgcaatt acaaattggt
     2221 gttaaccata taattgtata ttaatgatga agctgcaact ataaaatctt ttccctgtgg
     2281 tgaattataa ggtctgttta cgagcataac aacaatatac tttttgccgt taggtgtgta
     2341 aacaataccg gcatctccaa gcatcttgcc tatatcacct gttttgtgaa tgaatattgc
     2401 atcagatggc aatcctgcct gaataagcct gttattgtgg acatggctca tataatccac
     2461 cattttttct ctggaattaa gagagaggaa atttggatta tca
//
LOCUS       DABS01000042            3936 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_26659, whole genome shotgun sequence.
ACCESSION   DABS01000042 DABS01000000
VERSION     DABS01000042.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3936)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3936)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3936
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..274
                     /locus_tag="CPT85_01630"
     CDS             <1..274
                     /locus_tag="CPT85_01630"
                     /inference="COORDINATES: protein motif:HMM:PF06249.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26335.1"
                     /translation="IQYRQDSIDNKYLINEGNRALGIFAAAAGTVVPTQISPQDVCFY
                     ILEGKMDINTDDKTFCMKQGDLLLIPKTSAFNLNFIENAKVLTVRF"
     gene            complement(355..1122)
                     /locus_tag="CPT85_01635"
                     /pseudo
     CDS             complement(355..1122)
                     /locus_tag="CPT85_01635"
                     /inference="COORDINATES: protein motif:HMM:PF13197.4"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    361..372
                     /estimated_length=12
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    719..720
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1183..1647)
                     /locus_tag="CPT85_01640"
     CDS             complement(1183..1647)
                     /locus_tag="CPT85_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017814365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="DAB26336.1"
                     /translation="MANIIQGNLTTNNEKFCIIISRFNEFIGSKLLSGAIDELVRHGI
                     KEETIDIIWTPGAFEIPVIAKKAAKTGKYDAIITLGAVIKGATGHYDFVAAEVSKGIA
                     HVSLETGVPVIFGVLTTDNLEQAIERAGTKAGNKGSEAAKAAIEMANLAKLI"
     gene            2103..2891
                     /locus_tag="CPT85_01645"
     CDS             2103..2891
                     /locus_tag="CPT85_01645"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26337.1"
                     /translation="MPVEGIGASNSLTKIAAAQPKYQKQAAPAVSTASVNTNKEQKSK
                     KTPIVVAAVALAAIGSGVYVAKRKGWLGFEKAAKDVKDAATQIKKETAKVAKETEKVA
                     EQAGRKVADVRKLVEEKTNAEINEAKRVLAENTKDNFVDLGAIENAAGIKSATKGDVD
                     SFHKAATWLEVSYKDAYSKASVEEGKNILDKVYNRIANENNSLAKMYAQMPKEEAAVR
                     AEVFGKDLLAVNPEQKGMNLETFVKKLIEEVMPKAAEELKAGKK"
     gene            complement(2937..>3732)
                     /gene="ribF"
                     /locus_tag="CPT85_01650"
     CDS             complement(2937..>3732)
                     /gene="ribF"
                     /locus_tag="CPT85_01650"
                     /inference="COORDINATES: protein motif:HMM:TIGR00083"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="riboflavin biosynthesis protein RibF"
                     /protein_id="DAB26338.1"
                     /translation="KSAAITFREHPLCYLQNRTPQYIISLEDRLALIEQQGIDFAYVL
                     DFDEDIADALAIDYLKNFLIKNLKPRYITTGFNHYFGANKQGDAAFLRAYQQEFGYKF
                     FEIPPITFNNTLISSSKIRQMITEGDMENIPDLLGEYFYIKGRVITGNRIGRTISFPT
                     ANIKYPKEIIKASRGVYAAIVNIDGQKHKAIANLGKRPTIDTQHNLLLEAHLLDFNGN
                     LYDKDIKVSFIKKIRDEIKFASLPELKSQIVKDEQIAKEYFNDKKI"
     assembly_gap    3733..3771
                     /estimated_length=39
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1348 a          617 c          661 g         1257 t
ORIGIN      
        1 aatacaatac agacaagata gtattgataa caaatatctt atcaatgagg ggaatcgtgc
       61 gcttggtatt tttgctgcag ctgcgggtac tgttgtacca acacaaattt cacctcagga
      121 tgtttgtttt tatattctcg aaggcaaaat ggatataaat acggatgaca aaactttttg
      181 tatgaaacag ggagatttat tgctcatccc taaaaccagc gcttttaatc tcaattttat
      241 tgagaatgca aaggttttaa cagtaagatt ttaactaaca aaaaatcata aattttgccc
      301 agtgctcaat caatttcatt gaaaacggaa aatgaaaatg cctgttaaaa tattttattt
      361 nnnnnnnnnn nntttttcct cacctgttgt aattgcaaat tgggcaaaca aatctgtata
      421 aacaagacaa acataaaagc ttacaaacgg aagaagcagt acaagaattt gtccgtttaa
      481 caagataaat gaaagaatca aattgcaaac tgcaacaaga agacagtcaa aaaccaaaag
      541 aacataattt attaaattgt ctttgatcag actatacgct ttttttatgt taagaaaaga
      601 gcttattcta aaatcaagtg agaaatttag tgcaagcatt acataaaatg ctgtgtaaat
      661 tatatgtact atgccggcaa tcatgataaa tggaatgagc tctctgccaa atgtcattnn
      721 cataagcaaa gcaagtatca tcaaaaatgg tatagatatt ataaagccac caatgtagga
      781 ttttaagccg acataaatgt aataactgaa atacttccag gaaggcaagc ggcctttgtc
      841 atgaattatt ctgttgtgta ctgttttgaa aaaatatcca cttactgcaa gtcctgttgt
      901 taaaaatata agcccgaaaa gcgtgataag gtaatagtta attgggtcaa aaaggagtct
      961 ttttacacct ggaaaaataa acacaaagct ggggaaaaac agaatcaacc ccccgataaa
     1021 aacttttgtg atccattttg gatcttgagg cacaaaagca aacgcctgct taagactaat
     1081 acccattagc acgctcctga taaataataa acacactacc attgtaacac ttttttgtga
     1141 aaaatgatag tgtgttttct aattttattc aagattttat tgctaaatta attttgctaa
     1201 attagccatt tcaatagctg ctttggctgc ttcagaacct ttgttacctg cttttgttcc
     1261 ggctctttca attgcttgtt caaggttatc ggttgttaac acaccgaata taacaggcac
     1321 gcctgtctca agcgatacat gggcaatgcc tttagaaacc tctgccgcaa caaaatcgta
     1381 atgtcctgtt gcgcctttaa taacagcgcc taatgtaatg attgcgtcat acttacctgt
     1441 tttggcagct tttttagcaa ttacgggtat ttcaaatgca ccaggtgtcc aaattatgtc
     1501 gatagtttct tcttttatac catgacgcac caattcatct atagctccgg aaagcaattt
     1561 tgaaccgata aattcattga atcgtgaaat aataatgcag aatttttcat tatttgttgt
     1621 gaggttgccc tgtataatat ttgccattta ttttctcctg ttttgatatc ttcattaaat
     1681 tttacaatac aaaaactctg tttaaaagta atattaccgc ttttttacat ttttatccac
     1741 ccggcttcct gtagggtaat acaaataatt aatccttcgt tcaaaaatta ttttgtaatc
     1801 ggacatttat aaggggagag aattgatgtc ttatttgaga aagaactcaa gattttttta
     1861 cagtgtttct tatttatttt ttatttatgg aatcttgatt gcttgcgtta ctcaaatact
     1921 gtagtcagga aaaagcatgc ctgaaaagca gcgctaaata taatgttaag aaacattaaa
     1981 acgaattttg cttgatatta ttgagtttta gcttgtagta tatattttac tagcaaaaaa
     2041 aattgttttt gaatttaata ttatcagtgc attatggtca ataaaagaga aaagaggtaa
     2101 aaatgccggt agaaggaatt ggtgcatcaa atagtcttac aaaaattgca gcggcacagc
     2161 cgaaatatca aaaacaagct gctcctgctg tttcaactgc ttcagtaaat actaacaaag
     2221 agcagaaaag caaaaaaact cccattgtag ttgctgcagt tgcgttagct gctataggta
     2281 gcggcgtata tgttgctaaa agaaaaggct ggcttggatt tgaaaaagca gctaaagatg
     2341 taaaagatgc tgcaacacaa attaaaaaag aaacagctaa agtagcaaaa gaaacagaaa
     2401 aagttgctga acaagctggt agaaaagttg ctgatgtcag aaaacttgta gaagaaaaaa
     2461 ctaatgctga aattaatgaa gcaaaaagag ttctcgctga aaatacaaaa gataattttg
     2521 ttgatcttgg cgccatagaa aatgctgcag gtattaaatc agctacaaaa ggcgatgttg
     2581 attccttcca caaagcagca acatggttag aagtatcgta caaagatgca tactcaaaag
     2641 cttcggttga agaaggcaaa aatatcttag acaaagtata taatagaatt gctaatgaaa
     2701 ataacagcct tgcaaaaatg tatgcacaaa tgcctaaaga agaggctgcc gtaagagcgg
     2761 aagtattcgg taaagactta ttggcagtaa atcctgaaca aaaaggtatg aatttagaaa
     2821 catttgttaa aaaacttata gaagaggtta tgccaaaagc tgctgaagaa ttaaaagcag
     2881 gtaaaaagta atcataactt gttagttaaa aaagaggtat ttatatacct ctttttttat
     2941 atctttttat cattaaagta ttcttttgct atttgttcat cctttacaat ttgggatttt
     3001 aattcgggta aagaagcaaa ttttatctcg tctcttattt ttttgataaa tgaaaccttg
     3061 atatctttat catatagatt tccgttaaaa tccagcagat gtgcttctaa tagcagattg
     3121 tgctgtgtat ctattgtcgg tctttttcca agattagcaa ttgctttgtg tttttgtcca
     3181 tcaatattga caatagcagc ataaacacct ctggatgctt ttattatctc tttaggatat
     3241 ttgatattag ctgttggaaa agatattgtt ctgccaattc tgttacccgt tataactctg
     3301 ccttttatgt aaaagtactc gccaagcagg tcaggaatat tttccatatc accttctgta
     3361 atcatttgcc gtattttaga gctgctgatt aaggtattgt taaaggtaat cggcggtatt
     3421 tcaaaaaact tgtatccgaa ttcttgttga taagctctta agaatgcggc atcaccctgt
     3481 ttgtttgcgc caaaatagtg attaaaccct gttgttatat atctgggttt taaatttttt
     3541 attaaaaaat tttttaaata atcaatagcc agagcatcag caatatcttc atcaaaatcc
     3601 agaacatatg caaaatctat gccctgttgt tcaatcaaag cgagtctgtc ttccagagaa
     3661 attatgtatt gaggcgttct gttttgaaga taacaaagcg gatgctcacg aaaagttatc
     3721 gctgctgatt ttnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn natgcacccc
     3781 gtcaaaaaag ccgaggcata tagataaatc aggattctca tttagttgat taaaaatttg
     3841 catgcttata tcttatgaaa tacctgtaag tttttcaata aatttatatt tctatacaac
     3901 ggcaatatat attatttatt actaaatttg taatat
//
LOCUS       DABS01000043            5943 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_23171, whole genome shotgun sequence.
ACCESSION   DABS01000043 DABS01000000
VERSION     DABS01000043.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5943)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5943)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5943
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            101..1351
                     /gene="fabF"
                     /locus_tag="CPT85_01655"
     CDS             101..1351
                     /gene="fabF"
                     /locus_tag="CPT85_01655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002247955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase
                     II"
                     /protein_id="DAB26330.1"
                     /translation="MSKRRVVVTGLGIVSPFGVGVEKFWNSLLEGKXSTIEHISLEGH
                     TVHIAGEVKDFKPEEYLDPKDARRMDRYNQFAMVAADEAIADSGIVAGENVDPYRYGV
                     IVGSAAGGFDTFEKQHDIITAKGPTKCSPFTVPMIISDMGAGRISIKHGAKGVNKAVV
                     TACATSAHSVGDAFRSIQWDDADVIVAGGAEAVITKLGIGAFTSARTLSKHNDEPQKA
                     SRPYDKDRDGFIMSEGAAVLILEELEHAKKRGAKIYAEVVGYGQTADAYDIVAPASDG
                     AGAAMAMKLAVKDAGIEPKDVNYVNAHGTSTGLGDIAESQAIARVFGDLSTNPDLKVS
                     STKSMHGHMLGATGAAESIVCIEAINNGIVPPTINLDNQDEAVADLNYVPHKPQKAEI
                     KYALTNSFGFGGHNASILFKKYEA"
     assembly_gap    198..199
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1398..3374)
                     /locus_tag="CPT85_01660"
     CDS             complement(1398..3374)
                     /locus_tag="CPT85_01660"
                     /inference="COORDINATES: protein motif:HMM:PRK05563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26331.1"
                     /translation="MFSRIIILQDLIRSKILTQRYLPLYRKYRPQTFKDLIGQENIVK
                     ALSNAINLNKISHAYLLCGPRGTGKTTTARIIAKSLNCAKGPTLEPCGECPSCKDITN
                     STPIDVIEIDAASNRKVEDARNILEKIQFVPVNGRFKIYIIDEVHMLTTEAFNTLLKT
                     LEEPPENVIFILATTEPHKVLDTIISRCQRFDFRRITTEDIVARLQYICEQENISITQ
                     DALYTIARSSAGGMRDSLALLDQISVLDADKEISSDDVNEMLGRLSFETLFDLSNSIL
                     ESQTQNAIELLDKVYNKGNEPFQIITNLIQFFRNMLVVKNCTDRKIAAELTQLSEAHI
                     LKLREQSEAIEPEQMLYTIERLSYYSKEIKETTNRYLWLELCIIELSSNVKYSSYAQL
                     LERIERLEANVVSGEIKPSSVVQAPPVFKPAAAPVQAPQSTQPPMPAAQQHVEQEALK
                     PRETEAPKPVVSEPKPEPVAADVQAPKETAASSNNAASADIATAWQGILQNIESIPSR
                     MFFYNLSRPVELSKDGVTIAFLKEIFVKQAQDVSKNAPLKKAAMSYFNVDDINIHIKL
                     ADASDPEPQNIKPTLEKLEKKQVPAAPKVNETEEEAENAMLLKETLSPPAAKGSAYST
                     MTHNENTNSNDEIAENLSDQSKMVMELFNGKYIE"
     gene            3389..4282
                     /locus_tag="CPT85_01665"
     CDS             3389..4282
                     /locus_tag="CPT85_01665"
                     /inference="COORDINATES: protein motif:HMM:PF02016.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26332.1"
                     /translation="MRPIIPEKIKKGATIGFLAVSGDIKDYAKLEQAKVEFEKRGFNV
                     VISQTALTRKRYLCADDITRANALNEFFKNPEIDAIIACRGGYGAIRILDKIDYETIK
                     QNPKFFGGYSDITALQLMIYKKTGLVTYNSPMAYSDFGCETTQYTTKSFFDALTNGIN
                     ELSIDCPHVFFNGASAGVLWGGNLSTIQSLCGLDFLQDEKFIFVAEDINEPVYKIDKM
                     FTQLLNIPAFKNNLSAVVLGDFSGIDNERYFNEYFTELAQELKIPFTGGLKFGHEKDK
                     QTFSIGVNAIVDTNLGKIFIK"
     gene            complement(4275..5408)
                     /locus_tag="CPT85_01670"
     CDS             complement(4275..5408)
                     /locus_tag="CPT85_01670"
                     /inference="COORDINATES: protein motif:HMM:PF03739.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26333.1"
                     /translation="MHNKLFNKLSILDRYILIQVLEIFIMGIVIFTSIIFASDTFITL
                     IKQITLYGIPFNIALMIVLLNLPQVIVMAIPMSVLFSTVMTLNRLSLSSEITVMRACG
                     VGLNRIAKPIFIFATAMALLTFIVNETIVPVTNSQSKTLAVWALGQKNIPNGKQNFTF
                     KEIKEDAEGRKSMKRLFFVQKCEDNTLKNVSVVDFSNAKTIQVIQSQTGKTSPAGWQF
                     NRGAVYTMNKDGKILNTTWFSQSIVDFGMDVKDALTEEEATQYNVIALWKYVEKNAKK
                     HDPKTHSLFKIELYNKFAFPVTTVVLVLLGVPLAITPPRVRYNRGFLFSILIIFLYYL
                     LRALSLSFGETMAISPFLAAWIPNFVLFILGSMLYYRKVYTIT"
     gene            complement(5431..5751)
                     /locus_tag="CPT85_01675"
     CDS             complement(5431..5751)
                     /locus_tag="CPT85_01675"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26334.1"
                     /translation="MNKEEELKIIEDMQAVVAQMKADDIEENPDCEFDMFDCQCCGEE
                     KPLAGSVVYDGIRICNDCVLYAETGFALGKIKDIQDLIVNMEDKKLEAQCNFIKQDEI
                     EHNN"
BASE COUNT         1772 a         1045 c         1153 g         1971 t
ORIGIN      
        1 ttgcggggag catgaataat actccccgca actattaaaa actattaaag gggattttta
       61 tattatcccg ttcgagttta agaaaaaggt ttacaaaaca atgagcaaaa gaagagtagt
      121 tgttacaggt ttagggattg tttctccgtt tggcgttgga gtcgaaaaat tttggaacag
      181 tcttttggaa ggaaaaannt ctactattga acatatttcg cttgaaggtc acacagtgca
      241 tattgcaggt gaagtaaaag attttaaacc tgaagaatat cttgacccta aagatgcaag
      301 aagaatggac agatataatc agtttgctat ggttgctgct gatgaggcta ttgctgattc
      361 aggaatcgtc gcaggcgaaa atgttgatcc ctacagatac ggtgttattg taggttctgc
      421 agcaggcggt tttgatacat tcgaaaaaca acatgatatt attacggcaa aaggcccgac
      481 aaaatgctca ccatttactg ttcctatgat tatttcagac atgggtgcag gtagaatatc
      541 tatcaaacac ggtgcaaaag gcgtaaacaa ggcagtcgtt acagcatgtg caacttctgc
      601 tcattctgtg ggtgatgctt tccgctctat ccaatgggat gatgctgatg ttattgttgc
      661 aggcggtgct gaagctgtta ttacaaaact cggtataggt gcgttcacca gcgcaagaac
      721 attgtcaaaa cacaatgacg aaccgcaaaa agcttcaaga ccttatgaca aagaccgtga
      781 tggatttatt atgtcagaag gtgctgcagt gttaattctt gaagaattgg aacacgctaa
      841 aaaacgcggc gctaaaattt atgcagaagt tgttggctat ggtcaaacag ctgatgctta
      901 tgatattgtt gctcctgctt ctgacggtgc cggtgctgca atggcaatga aacttgctgt
      961 taaagatgca ggtattgagc ctaaagatgt taattatgta aacgctcacg gaacaagtac
     1021 aggtcttggt gatattgccg aatctcaagc tattgcaaga gtgtttggtg atctttctac
     1081 aaatcctgat ttaaaagtaa gctctacaaa atctatgcac ggccatatgc ttggtgcaac
     1141 aggtgctgct gagtctatag tttgtatcga agctattaac aacggcattg ttcctcctac
     1201 tatcaatctt gataatcaag atgaagctgt tgctgatttg aattatgttc cgcacaaacc
     1261 gcaaaaggct gaaatcaaat atgccttaac aaactcattt ggctttggcg gccacaatgc
     1321 ttcaattctg tttaaaaaat atgaagcata agaattaaac ttcaaaaaaa gacctctttt
     1381 ttaaagaggt ctttttttta ttcgatatac tttccgttaa aaagctccat aaccattttt
     1441 gattggtcag acagattttc cgctatttca tcattagagt ttgtattttc gttatgtgtc
     1501 attgtcgaat aagctgaacc ttttgctgct ggaggcgaga gagtttcttt tagcagcatt
     1561 gcattttctg cctcttcttc tgtttcattt actttcggtg cagcgggaac ctgttttttt
     1621 tctaattttt caagagtcgg tttgatattt tgtggttccg gatcggatgc atctgcaagt
     1681 tttatgtgga tatttatgtc atcaacatta aaatagctca tagcagcttt ttttaatggt
     1741 gcatttttgg aaacatcctg tgcttgctta acgaatattt cttttaaaaa cgcaattgta
     1801 acaccgtctt tgctcaattc tacaggacgt gaaagattgt agaaaaacat tcttgaagga
     1861 atactctcaa tgttttgtaa aataccctgc catgctgttg ctatatctgc cgaagcagca
     1921 ttgtttgagc ttgcagctgt ttctttaggt gcttgtacat ctgctgcaac aggctcaggc
     1981 tttggctctg atacaacagg tttaggggct tctgtttccc tgggttttaa agcttcctgt
     2041 tcaacatgct gttgtgctgc aggcattggt ggctgcgttg actgaggagc ttgaacaggc
     2101 gcagctgcag gcttaaagac aggaggtgcc tgtacaacag aagacggttt tatttctcct
     2161 gacacaacat ttgcctccag acgctctatt ctttcgagca gttgtgcata agaagaatat
     2221 tttacgttag atgaaagctc tataatacaa agctcgagcc agagatatct gtttgttgtt
     2281 tcttttattt cttttgaata ataggacaat ctttctattg tatagagcat ttgctccggc
     2341 tcaatggctt cggactgttc tctcaatttg agtatgtgtg cttcgcttag ctgggtaagc
     2401 tctgctgcaa tttttctgtc tgtacaattt ttgacaacga gcatatttct gaaaaattgt
     2461 attaaattag tgataatctg aaacggctca ttacctttgt tataaacttt atcaagcagc
     2521 tctattgcat tttgtgtttg tgattcgaga atagaattgc tcaaatcaaa gagtgtttca
     2581 aaagacagcc tgccgagcat ttcatttaca tcatcagaag atatctcttt gtcagcatca
     2641 agcacactta tctggtctaa aagtgcaaga gaatctctca tcccgccggc agagcttctt
     2701 gctatggtat aaagtgcatc ttgagttatg cttatgtttt cctgttcgca tatgtattga
     2761 agtctagcta cgatatcttc cgtagtaatg cgtctaaaat caaacctctg gcatcttgaa
     2821 ataattgtat ccaaaacttt atgaggttct gttgttgcaa ggataaagat gacattttct
     2881 ggcggctctt ccagagtttt taacaaggtg ttaaaagcct ctgttgtgag catatggact
     2941 tcgtcaatta tgtaaatttt gaaacgtccg ttaacaggta caaactggat tttttcaaga
     3001 atatttcttg catcttccac ttttctgtta gacgcagcat cgatttcaat aacatctatt
     3061 ggcgttgaat ttgtaatatc tttacagctc gggcattctc cgcatggttc cagggttgga
     3121 cctttggcgc aattcagaga ttttgcaata attcttgctg tagtggtttt tcctgtacct
     3181 ctgggaccgc acaagaggta tgcgtgagat attttattaa ggttaatagc attagacagt
     3241 gctttaacaa tattttcctg accaattaaa tccttaaaag tttggggtct gtattttctg
     3301 tataaaggta agtatctttg tgtcaaaatt ttgctccgaa tcaagtcctg taatataatt
     3361 atacgagaaa acatcggaaa aataaaatat gagaccaata atacctgaaa aaattaaaaa
     3421 aggcgcaacc atcggctttt tggcggtatc cggagatatc aaagattatg caaaacttga
     3481 acaggcaaaa gttgagtttg aaaaacgcgg ttttaatgtt gtaatatctc aaactgcttt
     3541 gacgagaaaa agatatctgt gcgcagacga tataacaaga gctaatgcgt taaacgaatt
     3601 ttttaaaaac cctgaaatag atgctataat agcttgtcga ggcggttatg gagctataag
     3661 gattcttgac aaaatagact atgagacaat aaaacagaat ccaaaatttt ttggcgggta
     3721 ttctgatata actgcgttac agttgatgat ttacaaaaaa acaggtcttg tgacatataa
     3781 cagcccgatg gcttattctg attttggttg cgaaacaacg caatatacta ccaaatcttt
     3841 ctttgatgca ttaacaaacg gcataaatga attgtccata gattgtccgc acgtgttttt
     3901 taacggagca tccgctggtg ttttgtgggg cgggaatctt tctaccatac aatcgttgtg
     3961 cggattggat tttttacagg atgaaaaatt tatctttgtt gcagaagata taaatgaacc
     4021 tgtttacaaa atagataaaa tgttcactca gctattgaat atccctgctt ttaaaaataa
     4081 tctttctgct gttgttcttg gtgatttttc aggcattgat aacgaaagat attttaacga
     4141 atattttaca gaacttgctc aagagttaaa aattcctttt actggtggat taaagtttgg
     4201 tcacgaaaaa gacaaacaaa ctttttcaat aggtgtgaat gctattgttg acacaaacct
     4261 tggcaaaatt tttattaagt aattgtataa acttttctgt aataaagcat agaaccaaga
     4321 ataaaaagca cgaagtttgg tatccatgct gccaaaaacg gtgatattgc cattgtttca
     4381 ccaaacgaga gagacagtgc tcttaacagg taataaagga aaataatcaa aatactgaat
     4441 aagaatcctc tattatatct tactctgggc ggagtgatag ccagcggcac acctaacaat
     4501 acaagaacta ctgttgttac aggaaatgca aatttgttat acaactctat tttaaataac
     4561 gaatgtgttt tggggtcatg ttttttggca tttttttcaa catatttcca caaagcaatt
     4621 acattatact gtgtagcttc ttcttctgtc agtgcatctt ttacatccat accaaagtct
     4681 acaatagact ggctgaacca cgtggtgtta aggattttgc cgtctttgtt cattgtgtat
     4741 acggcacctc tgttaaactg ccatccggca gggcttgttt tgcctgtttg agattggata
     4801 acctgaattg ttttggcatt tgaaaaatcg acaacagata cgtttttgag tgtgttatct
     4861 tcgcattttt gtacaaagaa aagacgtttc atcgattttc tgccttcagc atcttctttg
     4921 atttctttaa aggtaaaatt ttgcttaccg tttggaatat ttttttgtcc taaagcccat
     4981 actgcaagag tttttgattg agaatttgtt acgggtacaa tagtttcgtt aacaataaaa
     5041 gttaacagtg ccattgctgt tgcaaatata aaaatcggtt ttgcaatacg gtttaatcct
     5101 acaccgcaag cacgcataac cgttatttcc gacgaaaggc tcaatctgtt gagtgtcata
     5161 acagtagaaa aaagtacact cattggtatt gccataacga ttacctgcgg caaattcaac
     5221 aaaacaatca taagcgcaat gttgaaaggg attccgtaaa gagtgatttg tttaattaaa
     5281 gtgataaacg tatcggacgc aaaaattata gaggtaaaaa taacaatccc cattatgaag
     5341 atttcaagaa cctgtattaa tatatatctg tccagtatgc ttaacttgtt aaaaagtttg
     5401 ttgtgcattc gtttttactc aattacgttt ctaattgttg tgctcaattt catcttgttt
     5461 tataaaattg cattgagcct cgagtttttt atcttccata ttaacgatta aatcctgtat
     5521 gtctttgatt ttgcccagtg caaaacctgt ctcggcatac aaaacgcaat cattgcagat
     5581 tctgattccg tcataaacaa cggagccggc aagaggtttt tcttcgccgc agcactggca
     5641 gtcaaacata tcgaactcac aatccgggtt ttcttcaatg tcatcagcct tcatctgtgc
     5701 aaccacagcc tgcatgtctt ctataatttt taactcttct tctttattca taacttatat
     5761 tatatcgtaa aaaatattaa cttgactata ataaataatt ttaatattat attgttggat
     5821 ttacaacatg ttggagttac aacaatattg ttatgggtaa caaagatttt gaagaaaatt
     5881 tttttaactg ctatgcaaga agccttccct atcttataga aaaagcctct gtctatatca
     5941 ggc
//
LOCUS       DABS01000044            2635 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_36424, whole genome shotgun sequence.
ACCESSION   DABS01000044 DABS01000000
VERSION     DABS01000044.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2635)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2635)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(304..618)
                     /locus_tag="CPT85_01680"
     CDS             complement(304..618)
                     /locus_tag="CPT85_01680"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26327.1"
                     /translation="MILKEFSEFLQNNEDKPSVTLLYIWLKMKIEAPAKSNVDRILQK
                     EIYIAKNKAGNSLFIGKSPSGRRLMESLYNFALSFEQQKMARWIHKQKANDFKNCKDI
                     DK"
     assembly_gap    665..701
                     /estimated_length=37
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            818..2218
                     /locus_tag="CPT85_01685"
     CDS             818..2218
                     /locus_tag="CPT85_01685"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26328.1"
                     /translation="MKKIETTKQPMWGFSLAEALITLLIVCVIVLASVPVITKKHRQK
                     TDHGKWMCTLNSAGQHVVWSRGAQGSETDPETWGASNTNYCKFNVPATARNFAITIAA
                     AGGGGAGASTRSQTWTSDFAVQYPGMYNFLVIGGGGHGGGSTDKKDRSAGGGAGAVVA
                     MKLYLSDKVSQIRMQKGAKGGCCQKRDGTKNSGYAASDGNHSKIIGVMYNDSGILESK
                     NFIIAEGGDGGHGGEHGGSDADRDVSPPGKVYFDIPYNLKYASVNGKSYTYDYKCYGK
                     YGNVSCSNSSTCSNDVSYCSNRMWGIVLVKSSSDSNKICHGGMLTKTYQTQVNNFFSK
                     DKIKLYPELDCTPTSTFNRDYEYWRLSSSQRTTRNQMCAIPGLGGGSKQSRFACGDGG
                     SEGSKSGSDGYVMANTTYYLSGGGGQAGDSQTNIFYPRLEAKYLKVTVGXAAEAQAVC
                     LTVHMRQMVLMAVILL"
     assembly_gap    2140..2141
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2164..2523
                     /locus_tag="CPT85_01690"
     CDS             2164..2523
                     /locus_tag="CPT85_01690"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26329.1"
                     /translation="MSNSTYATNGTNGGDTSIETDKGETLAGKKGGLGGTVNHTQMAL
                     MDTPGGNGTVTNIYYKNSPQRGIGGMSEYEGITNTEIHGLKSSGYGDGGGGGGINSEG
                     EAGNGADGSNGIVIIEW"
BASE COUNT          874 a          464 c          543 g          715 t
ORIGIN      
        1 tataatataa taaattaata ttaataataa agaagcaaat ttctgtataa aactattata
       61 aaccaaacaa tataaagcac aaagcctgtt caaaaacatg ttcaaaacct gtagaaaacg
      121 tgttcaaaaa tgttcaaaac tttttaattt ttgtgtaaaa caatttttcc tgttcaaaac
      181 tcacgagttt tgaacaatga ttctacaggt tttctacaga aatttttgag ttttgaacag
      241 gttttgaaca ggcaagtttt acatgttatt acaaaaaatt ggcatgaaac catgccaaaa
      301 gtcttattta tcaatatctt tacaattttt aaaatcatta gccttttgtt tgtgaatcca
      361 gcgtgccatt ttttgctgtt caaaactcaa agcaaaattg tataaactct ccatcaaacg
      421 ccgtcccgac ggggatttgc caataaaaag agaatttccg gctttgtttt ttgcaatata
      481 aatttctttt tgcaaaatcc tatccacatt gctttttgcg ggcgcttcta tcttcatttt
      541 cagccatatg tacaaaagcg tgacagaggg cttatcttca ttgttctgta aaaattcgga
      601 aaattcttta agtatcataa taaaataata acgtagaaaa aatgtaaata aaacttaatg
      661 aatannnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ncccgtaagc ttttctgtaa
      721 ggtaaggtaa gtgacggtgg attatgtttt gttgggatga aatcagtgct caaattttct
      781 atcatgagaa cagtaggtat tgattttagg aaataatatg aaaaagattg aaacaacaaa
      841 acaaccaatg tggggttttt cacttgcaga ggcgcttata acccttctta tagtgtgtgt
      901 tatagtgctg gcttccgtac ccgtgataac aaaaaaacac aggcaaaaaa cagaccatgg
      961 aaaatggatg tgcacgctaa attctgccgg tcagcacgtt gtctggtcac gtggtgcaca
     1021 gggttctgaa accgaccctg aaacatgggg cgccagtaat acaaattatt gtaaatttaa
     1081 tgtacctgca acagctcgta attttgcaat aacaatagct gcagcaggcg gcggcggagc
     1141 gggtgcttcc acaagaagtc aaacctggac aagtgatttt gctgttcaat atccaggtat
     1201 gtataacttc cttgttattg gtggaggcgg ccatggcggc ggcagtacag ataaaaaaga
     1261 cagatcagca ggcggcggag caggtgctgt tgtagcaatg aagttatatt taagcgataa
     1321 agtttcgcaa ataagaatgc aaaaaggagc aaaaggcggc tgctgtcaaa aaagagacgg
     1381 tacaaaaaac agcggttatg cggcttctga tggcaatcat tctaaaatca tcggtgttat
     1441 gtataatgac agcggtattc tggaaagcaa aaactttatc attgcagaag gcggcgacgg
     1501 aggccatgga ggtgaacacg gcggttctga tgccgataga gatgtttctc ctccgggtaa
     1561 agtttatttt gatatacctt ataatcttaa atacgcttct gttaacggaa aatcctatac
     1621 ttatgactac aaatgctatg gaaaatacgg caatgtaagc tgttcaaatt caagcacttg
     1681 cagcaatgat gtttcgtatt gctcaaacag aatgtggggt attgttcttg taaaaagctc
     1741 ttctgacagt aataaaatat gccatggcgg tatgcttaca aaaacctatc aaacacaggt
     1801 aaacaatttt ttctcaaaag acaaaataaa actgtatcct gaattggatt gtacgccaac
     1861 cagcactttt aacagagatt atgaatactg gcgtctttct tcatcacaaa gaacaacaag
     1921 aaatcaaatg tgtgcaatcc ccggtcttgg cggcggatct aaacagtcac gctttgcctg
     1981 cggtgacggc ggttcagaag gttcaaaatc aggcagtgac ggatatgtaa tggcaaacac
     2041 aacctattac ttatcaggcg gcggtggaca ggccggagat tctcaaacaa atatatttta
     2101 tcccagacta gaggcaaaat accttaaggt gactgtaggn naggccgcgg aggcacaggc
     2161 ggtgtgtcta acagtacata tgcgacaaat ggtactaatg gcggtgatac ttctatagaa
     2221 actgacaaag gcgaaactct tgccggaaaa aaaggcggct taggcgggac tgtaaaccat
     2281 actcaaatgg ctttgatgga cacacccggt ggcaatggta ctgttacaaa tatatattac
     2341 aaaaacagcc ctcaaagagg tattggcggt atgtccgaat atgaaggcat aactaataca
     2401 gaaatccacg gattaaaaag ctccggctat ggcgacggcg gcggaggcgg cggaatcaac
     2461 tccgaaggcg aagccggaaa cggtgccgat ggctcaaacg gcatagttat cattgaatgg
     2521 taactcaaaa aaattattgt tccatatgga atgattaatt accaaaacag tacttattga
     2581 cccttgtgaa aaaacaaggg tcttttttta ttatgtaaat aaaacttaat gaata
//
LOCUS       DABS01000045           11715 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_7108, whole genome shotgun sequence.
ACCESSION   DABS01000045 DABS01000000
VERSION     DABS01000045.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 11715)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 11715)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11715
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(88..1362)
                     /gene="tig"
                     /locus_tag="CPT85_01695"
     CDS             complement(88..1362)
                     /gene="tig"
                     /locus_tag="CPT85_01695"
                     /inference="COORDINATES: protein motif:HMM:PRK01490.1-3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="DAB26280.1"
                     /translation="MKTTVEKLENNMVKVDIEIDAETAEKEYNKACKRLAQRVNIPGF
                     RKGKAPKAILEKNIGAEAIKHDVMDSLLPSAFAQAIKENDLNIITEPAVESYDFEIGK
                     PVKIVAKMELKPEVKFEQYKDLEVEVEEFKTAEDAMEKEIEELTEKFTTLQTVSDRES
                     TDKDVVMMDFEGSVDGNLIDGGSAKNYMLDLEHSNFIPGFAEQLVGHKTGEEFTIDVT
                     FPENYHDEKLNGKPAQFKIKINEIKEKIKPELNDELAKKVGNFKSVDELKADIQKYLD
                     NTAKVENDKRSANKLFETIMEKMSVEVQPSMVEREKQALLIDFKQKVAQSGVNWDDVM
                     KNDGPEKIDEELKTEALNRIKNSLMMSEIAKLENIQVTPQDLEQKIGELAMMYQTDKG
                     TIFKEIARXKKHCNDSIIITAGINSKSYKIPA"
     assembly_gap    161..162
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1538..3364)
                     /locus_tag="CPT85_01700"
     CDS             complement(1538..3364)
                     /locus_tag="CPT85_01700"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="DAB26281.1"
                     /translation="MRPLVNNTNFFIAFMLFCWYKKEALCADGRLVIIQRRVMGLPKV
                     AYFSMEIALDQSLSTYSGGLGFLAGSHMLSAGYLQLPMVGVTMLWSYGYYNQRINEEG
                     NVDVAYIRKHYDYLQDVDAQVTVDIFGEKVIVKAFRVDPELFGSCPVYLLTTDVDGNS
                     DWARSISHKLYDGNEKIRIAQETVLGVGGIRLLQAIKYDFECVHMNEGHALPAAFELL
                     QQNGGDLEKTKRQVVFTTHTPVAAGNEVHWVDTLMDGGFFAGCSRERAVELGGEHFSL
                     TVAALRMSRIANAVSQLHGLVSNKMWNWVEGRCPIRAITNAVNLHYWQDERIKNAKTL
                     QDLLDAKVEMKKEVFSYIANTTGKRFDPNVLTITWARRFADYKRAWLIFMDMDRILKL
                     LNANKVQLIFAGKFHPDDAMGREMFNNILHKSYNIKNVAVLAGYELELSGKLKRATDV
                     WLNTPIRPLEASGTSGMSANANGALHLSIFDGWTVEGTFPGINGYTVEYPGLDDDIPW
                     EERHWKDHDCIMDIIENQIIPTYYDNKMEWARMMRQAVRTSEAYFNSDRMVIEYFNRI
                     YKPIAHENPKEGGLNTNAQDMTVDPSQKEEPNMDAWTYSNIK"
     gene            complement(3345..3737)
                     /locus_tag="CPT85_01705"
     CDS             complement(3345..3737)
                     /locus_tag="CPT85_01705"
                     /inference="COORDINATES: protein motif:HMM:PF13180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26282.1"
                     /translation="MELIRVFMGILLVICLLLNVNFKKIHDYLEEQRILNETIEASSP
                     LGLYVEDFKGRVKIIDVLDYTPASNAGLEPGDRILKVNGCKIKNVKDFFECMEEANPD
                     EHVKLVVHRVDSCSTFPVDIAPFETTCK"
     gene            complement(3772..5814)
                     /locus_tag="CPT85_01710"
     CDS             complement(3772..5814)
                     /locus_tag="CPT85_01710"
                     /inference="COORDINATES: protein motif:HMM:PRK01233.1-1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="DAB26283.1"
                     /translation="MNKYLLEIGTEELPYKFVNTGLAQLKNAFEKLLQENQIEFTDIK
                     AFSTPRRLALIIEGFEEKQPDTVKTVKGPILNIAYDENGNLSKAGQGFAKKNGVDESA
                     LYQEDNYVWAKVEQKGKSIKDILQENVEKIVLKMQGPYFMRWADLDVKFQRPIRWVVS
                     LLNDDELKIKIAEVESSRYSRGHRFKSDKVEIKNPDNYEKALFDNNVVVDSEKRKSMI
                     VESARKEAASIGADVYMEDGLLEEVTNICEWPVPVICNFDEKYLDIPEKVTVTVMAVH
                     QRYFPLYKAGKLLNSFITITNYIGNNFDNIKAGNERVVVARLDDAIFFFNEDTKNPFE
                     SYVEALKGITFQKGMGSMFDKTNRIVKLSEILAEKLNAPVDTVKRTALLCKADLVTSL
                     VFEFTELQGFIGSDYAFNAGEKPAVVKGIKEHYYPLGADSELAESVEGQIVGIADKID
                     TIVAVFAEGKKPTGSADPLGVRRATLGIIKTIIQKSLNIDLEDLIKKSIALMPVEIKD
                     KEGLFNEVKNFFENRLSIFYTEKYRHDVVEACISNKAVLSNLKDFSERVEFLSQKISS
                     PDFNVLNEAANRIIRITKDYKTEQLSDKSLFNNSAESKLMECTISIDSDKLSYQELYT
                     ELSKAVKAIDEFFDMGRYLVFGCLFASIXSKKLKKTDLLFFILLKRNSKKLQISQN"
     assembly_gap    3856..3857
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5924..6226
                     /locus_tag="CPT85_01715"
     CDS             5924..6226
                     /locus_tag="CPT85_01715"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26284.1"
                     /translation="MENKRWYDKEPTLSLAVSLIKNSNDTTQQKCAEFIKNRAQDYGI
                     TLKSNLLGAFNYVLNRWYDSSEQLAEAFDYLKDADDETRKQIAIEVIAFLEKAECQ"
     gene            6217..7113
                     /locus_tag="CPT85_01720"
     CDS             6217..7113
                     /locus_tag="CPT85_01720"
                     /inference="COORDINATES: protein motif:HMM:TIGR02669"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26285.1"
                     /translation="MPIMNKLKSIILILSLIIIPVFNANKAHAMKIGIVDGASQVSVG
                     TSKEAELISPLHNKAFYKLKPMKPYAFKATGSTISIELNDQWFNLNIARIVVKPAEKG
                     FVSTKRRWYRGEFIIENRDGSLVVVNNLPLEDYMLGVVPSEMPSKWNYEALKAQAIAA
                     RSYAIANRGKRASRGYDLKDTPEDQAYGGASSETATTNSAVLETKGVVITYNKKVIPA
                     YYSASAGGHTVNSGAVWNKDLPYLKSVPSFDEGVKKNGHGLGMSQHGANKLAQNGYNA
                     YQILTYYYNNVKFGRLDPAWNL"
     gene            7272..7544
                     /locus_tag="CPT85_01725"
     CDS             7272..7544
                     /locus_tag="CPT85_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012094838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="DAB26290.1"
                     /translation="MNKEELVKEVAKKAKVSQKAAADVIAATLETVTKSVAKGQKVTL
                     VGFGTFEPRKRAARSGRNPQTGATIKIAAKTVPAFSAGKKFKEAVK"
     gene            7701..8060
                     /locus_tag="CPT85_01730"
     CDS             7701..8060
                     /locus_tag="CPT85_01730"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26286.1"
                     /translation="MLQEATKIIQSAFHDSFIKRLSLYLHDCVREEVQSSTFRNLKQD
                     KDNKWIFLKGEEQLFTHFEHPLMLDGSDSDLTELMIQSEMSQKDKYLIYGHLFLVGKN
                     SKSKRKNEFLTPLXLPP"
     assembly_gap    8047..8048
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8104..8496
                     /locus_tag="CPT85_01735"
     CDS             8104..8496
                     /locus_tag="CPT85_01735"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26287.1"
                     /translation="MSLNTGALTALMRKSDDEDEMEHMLDGLLEVVPELPLTQEKLNI
                     FLTTLKSILPDVDISLNHEDDDNENFVKDDAAENFYQKIDSENVDDFIEDSQDSKPSI
                     KLDKVSVTNQSAXNNTYKASLYHSRRFT"
     assembly_gap    8446..8447
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8795..10834
                     /locus_tag="CPT85_01740"
     CDS             8795..10834
                     /locus_tag="CPT85_01740"
                     /inference="COORDINATES: protein
                     motif:HMM:PF13086.4,HMM:PF13087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26288.1"
                     /translation="MASRMDKAVDVVAQRLNELGAPFLALRAGRLNYQKQLSFQLQDS
                     IANKIDIDTGYEEAILVDVEDMYALLNAIKELENKCEKIIELEKSWQEVMARKLALEA
                     DLGEKIFINKKLKKDEVDEIKKVLSSIEKNLEKSGIFSSISNSLSAMKLKKILNISSL
                     PAEPESIMRLSLELQAAEMECEARMVETRIHKIGNIHQILGQIKQLKKKQKGLAVDIL
                     KNKRRESLKGLLRDQIKRQRLIVHTKAIVERKKNLQNRLLEEEDFTPLLEAFPCWCVT
                     TYAISGSLPMKSGLFDVAIIDEASQCDIASCFPILFRAKKAVIVGDDKQLPHLSFLEK
                     AKEQSFLSQYNIPDKYQLMWRFRTNSMFDLANYYSTNPVLLDEHFRSYYPIIQFSNQE
                     FYGNRIRIMTKDSGSNDVLELHLVTDGKVDSDATRNMPEVEAVVKRIHELILQDEGNE
                     DNPVSIGVVSPFRGQVDLIGKALRQVLTESTIRRHQIEVGTAHTFQGDERDVMIFSLA
                     VADNSFAQSLTFLQKPNLFNVAITRARKKLITFLSRDPKSLPAGLLKDYIEYTQNYIE
                     SAKEDEFSSKNKFKNSFEQTVAQALIMEGLEVKAGFEAAGVYPDIMVKDEFNNEVIVE
                     IDGVEDNLKSNTKDIKKQTILERAGYKVVRMSFREWEHSSQACIDRVKQILVKVD"
     gene            complement(10831..>11715)
                     /locus_tag="CPT85_01745"
     CDS             complement(10831..>11715)
                     /locus_tag="CPT85_01745"
                     /inference="COORDINATES: protein motif:HMM:PF01262.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="DAB26289.1"
                     /translation="DEFALLKNGQTVLSYAHLAIEPQLLDVLLKKKITTIDYETIQMP
                     DGRLPMLMPVSEIAGRVSIQIGARLLENTYGGVGKLLGGVPGVYPSEVLIIGAGVVGI
                     HAAKVALGMGAIVTMLDVSPEKLSEAAKLFQGRVNTAMSNKYNVEKFTKTADLVIGAV
                     LIVGTKAPHIITEDMVKNMRKGSVIIDVSIDQGGIVETIEEPTSFENPTFEKHGVIHC
                     AIPNIPSCVARTATISFNNYVLPYLLRLSTKGFIAAVKSMPELYKGVSTFQGKLTDPV
                     IAKSVGYPYSELSMLIGF"
BASE COUNT         3800 a         2197 c         2000 g         3710 t
ORIGIN      
        1 tattatttgc cctttcgctc ttctgtaata ctaatatata ttataaacta ctttttgtcg
       61 cctgcaacga atttgatttt gttattttca agcaggaatt ttgtaacttt ttgagttaat
      121 gcctgctgtg ataatgattg aatcattgca gtgtttcttg nntcttgcta tttctttaaa
      181 tatagtacct ttatctgttt gatacatcat agccaactca cctatttttt gttccaaatc
      241 ctggggagtc acctggatgt tttcaagttt tgcaatttca gacatcatca aagaattttt
      301 gattctgttc aacgcttctg ttttcaattc ttcatcaatt ttttccggtc cgtcattttt
      361 cataacatca tcccagttta cgcctgattg agcaactttt tgtttaaagt ctatcaaaag
      421 tgcctgtttt tctctttcaa ccatagaagg ttgtacttct acagacattt tttccatgat
      481 tgtttcaaac aatttgttag cacttctttt atcattttca actttagctg tattatccaa
      541 atatttttgg atatcagctt tcaattcgtc aacagattta aagttgccta cttttttagc
      601 aagttcatca ttcaattcag gtttaatttt ttctttaatt tcattaattt taattttgaa
      661 ttgagccggt ttgccattta atttttcgtc atggtaattt tcagggaaag ttacgtcaat
      721 tgtaaattct tctcctgttt tatgtccaac gagctgttct gcaaaaccag gaatgaaatt
      781 gctgtgttct aaatctaaca tgtaattttt agcagaaccg ccatcaatta aatttccatc
      841 tacagaacct tcaaagtcca tcatcacaac atctttatca gtagattctc tgtcagaaac
      901 tgtttgaaga gtagtgaatt tttcagttaa ttcttcaatt tctttttcca ttgcatcttc
      961 agctgttttg aactcttcaa cttcaacttc aagatctttg tattgttcaa atttaacttc
     1021 gggttttaat tccatttttg caacaatttt cacaggtttg ccaatttcaa aatcataaga
     1081 ttcaacagca ggttctgtga taatatttaa atcgttttct ttaatcgcct gagcaaaagc
     1141 tgagggtaaa agagaatcca taacatcgtg cttaatagct tcagcaccga tatttttttc
     1201 caatattgct ttaggagctt tacccttacg gaaaccgggg atattaactc tttgtgcaag
     1261 tcttttacaa gctttattgt attctttttc agcggtttct gcgtcgattt caatatcgac
     1321 tttaaccata ttattctcta atttttcaac tgtagttttc atctttaatt atccttattt
     1381 ctctttaacg acatattatc ctaatctata ggataattat attataaaag taccataaat
     1441 aaagcatgat acaaaaaatt agtaccaata aagtagatta acaaaagcaa aagaccctct
     1501 ttaaacaaga gagtcttttg tattatccaa attttattta tttaatattc gaataagtcc
     1561 aagcatccat gttaggttct tctttttgag aaggatcaac tgtcatgtct tgagcgtttg
     1621 tattcaagcc gccttctttt ggattttcgt gagcgattgg tttatagatt ctgttaaagt
     1681 attctataac cattctgtca gagttgaagt aagcttctga tgttcttact gcctgtctca
     1741 tcattcttgc ccattccatc ttattgtcat agtaagtagg aataatctgg ttttcaatga
     1801 tgtccataat gcagtcatga tctttccagt gacgttcttc ccaaggaata tcatcatcca
     1861 ggccgggata ttcaacagta tagccgttga ttccggggaa agtaccttca actgtccaac
     1921 cgtcaaagat tgaaaggtgt aatgcaccgt ttgcgttagc agacatacct gaagtacctg
     1981 atgcttccaa aggtctgata ggtgtattca accaaacatc agttgctctt tttaattttc
     2041 cgcttaattc aagttcataa cctgctaata ctgcaacgtt tttgatgttg tatgatttgt
     2101 gaagaatgtt attgaacatt tcacgtccca tagcatcatc cggatggaat ttacctgcaa
     2161 aaatcaattg cactttgttg gcatttaaca gtttcaagat tctgtccatg tccatgaaaa
     2221 ttaaccatgc acgtttgtag tcagcaaatc ttcttgccca tgtgatagtt aaaacattgg
     2281 ggtcaaatct tttaccggta gtgttagcaa tgtagctgaa aacttctttt ttcatttcaa
     2341 cttttgcatc taacaagtct tgaagagttt ttgcattttt aattctttca tcctgccagt
     2401 aatggaggtt aacagcattt gtaatagctc taatcgggca tctgccttca acccagttcc
     2461 acattttgtt agaaacaaga ccgtgcagct gagatacagc atttgcaata cggctcattc
     2521 ttaatgcagc tactgttaaa gagaagtgtt cgccaccaag ctcaacagct ctttctcttg
     2581 agcagcctgc aaagaatccg ccgtccataa gtgtatcaac ccagtgaact tcgttacctg
     2641 ctgcaacagg tgtgtgagtt gtaaatacaa cttgtctttt tgttttttca aggtcgccac
     2701 cgttttgctg caacaattca aatgcagcag gaagtgcatg accttcgttc atgtgaacgc
     2761 attcaaaatc atatttaata gcttgtaaca atctgatacc gccaacacca agaacagttt
     2821 cttgagcgat tctgattttt tcgttaccgt catataattt gtgagaaatt gaacgagccc
     2881 agtcagagtt gccgtcaaca tctgttgtca ataaatacac agggcaagaa ccaaataatt
     2941 cagggtcaac tctgaatgct tttacgataa ctttttcacc aaagatatca acagtaactt
     3001 gcgcatcaac atcttgtaaa taatcatagt gttttctgat gtaagcaaca tcaacgttac
     3061 cttcttcgtt aattctctgg ttgtagtagc cgtaagacca caacatagtt acaccgacca
     3121 taggaagttg taagtatccg gcagaaagca tgtgtgaacc agctaagaaa cccaagccgc
     3181 cagaataggt gcttaaggat tggtccaatg ctatctccat tgaaaaatat gctactttag
     3241 gtaatcccat aactctcctt tgtataatca ctaatctacc atctgcacaa agtgcctctt
     3301 ttttatacca acaaaatagc ataaatgcaa taaaaaaatt agtattattt acaagtggtc
     3361 tcaaaaggcg ctatatcaac gggaaaagtc gaacaactat ctactctgtg tacaacaagt
     3421 ttgacgtgtt catccggatt ggcttcttcc atacattcaa aaaaatcttt tacatttttt
     3481 attttacagc cgttaacttt gagaattctg tccccaggtt ctaatccggc attactggca
     3541 ggtgtataat caagtacatc aataattttc acccttcctt taaaatcttc aacataaagc
     3601 cccaacggtg atgatgcctc aattgtttca ttgagtattc tctgttcttc aagatagtca
     3661 tgaatctttt taaaattcac gtttaaaaga aggcatatta caagtaatat gcccataaaa
     3721 actcttataa gttccatatt tatttcttgt tagattatta ccgtcaaatt actaattttg
     3781 agaaatctgc aattttttcg aatttctttt taataagata aagaagagca agtctgtttt
     3841 ctttaacttt ttcganncta tgctggcaaa aagacagcca aagactaagt aacgccccat
     3901 atcaaagaat tcatcaatag cttttactgc ttttgaaagc tctgtgtaaa gttcttgata
     3961 acttaactta tcagagtcaa tagatattgt gcattccata agtttcgact cagcagaatt
     4021 attaaataat gacttgtcgg ataattgttc tgttttataa tcttttgtga ttctgattat
     4081 tctgtttgca gcttcgttaa gaacattaaa atcaggtgaa gaaatttttt gtgataaaaa
     4141 ttctactctt tcagaaaaat ctttaaggtt agaaagcact gctttattag aaatgcaagc
     4201 ttcaacaaca tcatgcctgt atttttccgt atagaaaatg ctcaatctat tttcaaagaa
     4261 gtttttaact tcattaaaca aaccttcttt atctttaatt tcaacaggca ttaatgcaat
     4321 tgattttttg attaagtctt ccaaatcaat gttcaatgat ttttgaatga ttgttttaat
     4381 aatacctaga gttgctcgtc ttacacctag agggtcagca gagcctgtag gttttttacc
     4441 ttctgcaaac acagcaacaa ttgtatcaat tttgtctgca ataccgacaa tttgaccttc
     4501 aacagattcg gcaagctcag aatctgcacc tagaggatag taatgctctt ttattccctt
     4561 tacaacagcc ggtttttcac ctgcgttgaa agcataatca gagccaataa aaccctgaag
     4621 ctcagtgaat tcaaaaacaa ggcttgtaac aagatcggct ttgcataaaa gcgctgttct
     4681 ttttacggta tctacaggcg cattgagctt ttcagctaaa atttctgata gtttaactat
     4741 gcggtttgtt ttatcaaaca tagagcccat gcccttttgg aaagttatac ctttgagggc
     4801 ttctacatag ctttcaaaag ggtttttggt atcttcatta aagaagaaaa ttgcgtcatc
     4861 cagccttgca acaacaactc tttcattacc ggctttgata ttatcaaaat tattgccaat
     4921 ataatttgta attgtaataa agctgttaag taatttccct gccttgtaca aaggaaaata
     4981 tctttgatga acagccataa cggtaacagt aactttttca ggaatatcaa gatatttttc
     5041 atcaaaatta catattacag gcaccggcca ttcacagata tttgtaactt cttcaagaag
     5101 tccgtcttcc atataaacat cagcaccaat agatgcagcc tcttttcgtg cggattcaac
     5161 aatcattgat tttcttttct ccgaatcaac aacaacattg ttgtcaaaaa gtgctttttc
     5221 ataattatca ggatttttga tttctacttt atcagatttg aatctgtggc ctcttgaata
     5281 tcttgaagat tcaacttctg ctattttaat cttaagttca tcatcattta aaagagaaac
     5341 aacccatctt atgggacgtt gaaattttac atccaggtca gcccatctca taaaataagg
     5401 gccttgcatt tttaaaacaa ttttttcaac attttcctgc aaaatatctt taatagattt
     5461 gcctttttgc tctaccttgg cccaaacata gttgtcctct tgatacaaag cagattcatc
     5521 aacaccgttt ttctttgcaa agccctgtcc tgctttggaa aggtttccat tttcatcata
     5581 tgcaatattt aaaatagggc cttttactgt ttttactgta tcaggctgtt tttcttcaaa
     5641 accttctata atcaaagcca gacgtcttgg tgtagaaaaa gcttttatat cagtaaattc
     5701 aatctgattt tcttgcaaaa gtttttcaaa tgcatttttt aattgagcaa gccctgtatt
     5761 tacaaatttg taaggtaatt cttctgttcc tatttccagc aaatatttat tcatacgatt
     5821 ttattccttt aatagtgtta tatatgagca taattataat acaaacacat tatgtttttc
     5881 atgaaatttt tgatgttata atatcgtctg tgggagaatt atcatggaaa ataaacgctg
     5941 gtatgacaaa gaaccgacat taagcttagc agtaagcctg attaaaaatt cgaatgatac
     6001 tactcagcaa aagtgtgcag aatttattaa aaacagagca caggattacg gcataactct
     6061 taaaagcaat cttctgggtg catttaatta tgttcttaac agatggtatg attcttccga
     6121 acagttagcg gaagcttttg attatctgaa agatgccgat gacgaaacaa gaaaacaaat
     6181 tgcaatcgaa gtaattgcat ttcttgaaaa agcagaatgc caataatgaa caagctaaaa
     6241 tctattattt taatattaag tttaataata atacccgtct ttaatgccaa taaagcacat
     6301 gcaatgaaaa taggcatagt ggacggtgct tctcaagttt ctgtgggcac aagcaaagaa
     6361 gctgaattaa taagcccttt gcacaacaaa gccttttaca aactaaaacc aatgaagcct
     6421 tatgcattca aagctacagg cagcacaata tcgattgaac tcaacgacca gtggtttaac
     6481 ttaaacattg ctagaattgt tgtaaaacct gcggaaaagg gatttgtatc aacaaaaaga
     6541 agatggtaca gaggcgaatt tattattgaa aacagagacg gctcacttgt tgttgtaaat
     6601 aaccttccgc tggaagacta tatgctagga gttgttccgt ctgaaatgcc ttcaaaatgg
     6661 aactatgaag ccctaaaagc gcaagccatt gccgcaagaa gctatgctat tgccaacaga
     6721 ggcaaaagag cctccagagg ctatgacctt aaagatacgc ctgaagatca agcctacggc
     6781 ggagcctcat ctgaaacagc gacaacaaac agtgctgttt tagaaaccaa aggagttgtt
     6841 attacttata acaaaaaagt tatccctgca tactattcag catccgctgg cggtcacaca
     6901 gtcaactcag gagcagtttg gaataaagac cttccgtatt taaagtcagt gccgtctttt
     6961 gatgagggtg ttaagaaaaa cgggcatgga ctcgggatga gccagcatgg cgcaaacaag
     7021 cttgcccaaa acggttacaa tgcgtatcaa atcttaactt attattacaa taatgtaaaa
     7081 ttcggccgtt tagatccagc ctggaactta taaactgcag ccataaaagc cttatgctgc
     7141 aacatttttg ctgtctacta ccagtgtaaa acaagatata ttttcaaatt cttcatattt
     7201 ttatgttaaa aaggcttgct aaaatgctaa aaatagatat aatagtcttt gttaacaaaa
     7261 aggaggttct tatgaacaaa gaagaattag taaaagaagt tgcaaaaaaa gcaaaagttt
     7321 ctcaaaaagc tgctgctgat gttatcgctg ctacattaga aacagttaca aaatctgtag
     7381 caaaaggtca gaaagttaca ttagttggtt tcggtacatt cgaacccaga aaaagagctg
     7441 ctcgctctgg ccgtaaccct caaacaggtg ctacaattaa aatcgctgct aaaacagttc
     7501 ctgctttctc agctggtaaa aaattcaaag aagctgttaa gtagttttct aagatttaat
     7561 aaaagagagt ctttggttaa tccgaaggct cttttttatt gataattaat tctataatct
     7621 actcaaaacg tacgatacgc acaaaatatt atccgttata attttattta agggattata
     7681 tatttttata gagagatttt atgttacaag aagccacaaa aattattcaa tcagcatttc
     7741 atgacagttt tatcaaaaga ttgagccttt acctgcacga ttgtgtgcgt gaagaggtgc
     7801 aaagctcaac gttcagaaac cttaagcagg acaaagacaa caaatggatt tttctcaaag
     7861 gtgaagagca gctttttact cattttgaac accctctcat gttagacgga tctgacagtg
     7921 acctgacaga actaatgata caaagtgaaa tgagccagaa ggacaaatat ctgatctacg
     7981 gccacctgtt tcttgttggt aaaaactcga aatcaaaacg taaaaacgaa tttttaacac
     8041 cgctttnnct gccgccttga aagagacggt gtaaatatct catgcacatt acaggatgat
     8101 gtaatgtcac taaacacagg tgcattgaca gcgcttatga gaaaaagcga tgacgaagat
     8161 gaaatggagc acatgcttga cggtcttctt gaagttgtgc ctgaattgcc gcttacgcag
     8221 gaaaaactaa acatctttct tacgacatta aaatcgattc ttcctgatgt tgatatttct
     8281 ttaaaccatg aagatgatga taacgaaaat tttgtaaaag acgatgcagc cgagaatttc
     8341 tatcaaaaaa tcgactctga aaatgttgat gattttatag aagactcgca ggattccaaa
     8401 ccttctataa aactggacaa agtctctgtg acaaaccaaa gcgcanncaa taatacttac
     8461 aaagcgtccc tctatcacag caggcgtttt acatgagctt acacaaattg ctgaaaaacc
     8521 aagcggtgtt tttagagaaa cagcactttc tgttgtaaat gacgaatatc ttagaggaat
     8581 cggcaagctg tttgacaaat ccggtaaaga aaagaaagag ttaaaagact ttgctgcagt
     8641 aacccctctt tctttaagcg attcacagga agatgtaata agaaaaattg aacaaaaccc
     8701 gcttctggct gtttatggcc ctcctggaac aggtaaatct cagacaattg taaacctggt
     8761 tgcacacctt gttgcaaacg gtaagactgt tcttgtggct tctcgaatgg ataaagcagt
     8821 ggatgttgtt gcacaaagat tgaatgaact gggtgcacct tttcttgctt taagagcagg
     8881 ccgattaaat tatcaaaaac agttgagctt ccagctgcaa gattcgattg caaataaaat
     8941 agatattgat acaggttacg aagaagcaat tcttgttgat gtagaggaca tgtatgctct
     9001 tttaaatgca ataaaagagc ttgaaaacaa atgcgaaaaa atcatagagc tggagaagag
     9061 ctggcaggaa gttatggcaa gaaagctcgc tcttgaggct gatcttggag aaaaaatatt
     9121 tataaacaaa aaactcaaaa aagatgaagt tgatgagata aaaaaagttt tatcaagtat
     9181 tgaaaaaaat ctcgaaaaat ccggtatttt ctcttcaatt tcaaattctc tttccgcaat
     9241 gaagcttaaa aagatattaa acataagctc actacctgca gagccagaat caataatgag
     9301 attgtctttg gagcttcagg ctgccgagat ggaatgtgaa gcaaggatgg ttgaaacaag
     9361 aatccacaaa ataggaaaca tccatcagat actcggccaa ataaaacagc ttaagaaaaa
     9421 acaaaaaggc cttgccgtag acattctcaa aaacaaaaga agagaatctc taaaaggtct
     9481 tttaagagac cagataaaaa gacaaagact tattgtacac acaaaagcta ttgttgaaag
     9541 aaagaaaaat ctgcaaaaca gactgcttga agaagaagat tttacacccc tattagaagc
     9601 atttccatgc tggtgtgtta caacttatgc aatttcaggc tcattgccta tgaaatcagg
     9661 gttatttgac gttgcaataa ttgatgaagc atctcaatgc gatatagcaa gctgcttccc
     9721 tattttattc agagcgaaaa aagcagttat tgtaggggac gataaacagc ttccgcacct
     9781 ttcattcctt gaaaaagcaa aagagcaatc ctttttaagc cagtacaata ttcctgataa
     9841 ataccagctt atgtggagat ttagaacaaa ctctatgttt gatctagcaa attactattc
     9901 aacaaaccct gttttgctag atgaacactt tagaagctac tatccaataa ttcaatttag
     9961 taatcaggag ttttacggca acagaattcg cattatgaca aaagattcgg gttcaaatga
    10021 cgtactggag ctccatcttg taacagacgg aaaagtagac tcagatgcaa caagaaacat
    10081 gcctgaggta gaagctgttg taaaaagaat acacgagctg atactacaag acgaaggaaa
    10141 cgaagacaac cctgtatcaa taggtgttgt atctcctttt cgtggacagg tggacctgat
    10201 aggcaaagca ctgcgtcagg ttttgacaga atccacaata agaagacatc agatagaagt
    10261 aggtacagca catacatttc agggtgatga gagagatgtt atgattttct cgcttgctgt
    10321 tgcagacaac agttttgcac agagtttaac atttctgcaa aagccaaact tgtttaacgt
    10381 agcaatcacc cgtgcaagaa aaaaactgat aactttcctt tcaagagacc ccaaaagcct
    10441 tccggccgga cttttaaaag attatataga atacactcaa aactatattg aaagtgcaaa
    10501 agaagacgag ttttcaagta aaaacaaatt caaaaattct tttgaacaaa ccgttgcaca
    10561 ggcattaata atggaaggtc ttgaagtaaa agcaggattt gaagcagcag gtgtttatcc
    10621 tgatattatg gtaaaagatg agtttaacaa tgaagtcatt gttgaaattg acggtgttga
    10681 agacaatctt aaatcaaaca caaaagatat taaaaagcag accatactgg agagagcggg
    10741 ctacaaagta gtcagaatgt ctttccgtga atgggaacac agctcacaag cctgcattga
    10801 cagagtaaaa caaatccttg taaaagtaga ttaaaaacct atgagcattg ataattcaga
    10861 atatgggtaa ccaacagatt ttgcaataac aggatctgtt aatttcccct ggaaagtgct
    10921 cacgccttta tacagctccg gcattgattt gacggcagca ataaaacctt ttgtcgacaa
    10981 tctcaaaaga tatggcaata catagttgtt gaatgaaatt gtagcagtac gtgcaacgca
    11041 acttggtata ttcggtattg cacaatgtat aacaccatgt ttttcaaatg tcgggttttc
    11101 aaaagaagta ggttcctcaa tagtttctac aataccgccc tggtcaattg aaacatcaat
    11161 gataacagag ccttttctca tatttttgac catatcttct gtaataatat gaggagcttt
    11221 tgtaccgaca atcaatactg caccgattac aaggtcagca gtcttagtga atttttcaac
    11281 attgtatttg ttggacatgg ccgtattaac ccgtccctga aatagctttg cagcctcgct
    11341 taatttttcg ggtgaaacat cgagcattgt aacaatagct cccattccaa gagcaacttt
    11401 tgcagcatga atacccacca caccagcacc gataatcaat acttcactcg ggtaaacgcc
    11461 tggtacaccg ccaagcaatt tacctactcc accatatgtg ttttcaagaa gccttgctcc
    11521 tatttgtata gaaacacgtc ctgcaatttc gctcacaggc ataagcatag gcaatctgcc
    11581 gtcaggcatt tgtattgttt cgtaatctat tgttgtaatt tttttcttta acagcacgtc
    11641 aagcaattgt ggctcaattg caaggtgagc atacgataaa actgtttggc cgtttttgag
    11701 aagagcaaac tcgtc
//
LOCUS       DABS01000046            7261 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_23328, whole genome shotgun sequence.
ACCESSION   DABS01000046 DABS01000000
VERSION     DABS01000046.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7261)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7261)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7261
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     assembly_gap    209..210
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(215..802)
                     /locus_tag="CPT85_01750"
     CDS             complement(215..802)
                     /locus_tag="CPT85_01750"
                     /inference="COORDINATES: protein motif:HMM:PF05951.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26275.1"
                     /translation="MPGISNMSSMTMPDSLGIYNSFGPMMTMDPIDSFCSSIMQDFTQ
                     RQNEFFKAILEVLNSATVDHTPEPFVAQNIRPYDYNKYGKKNGELISQLTPTMQEKTM
                     QLLEYAKSQNLNIKITSGYRTPAEQAELRRKRPDVAATKSLHCEGKAVDLKIINGTYN
                     DYKKLGDYAKSIGMRWGGDFKNPKPEEWHFDLGWS"
     assembly_gap    816..817
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            925..1899
                     /locus_tag="CPT85_01755"
                     /pseudo
     CDS             925..1899
                     /locus_tag="CPT85_01755"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1633..1649
                     /estimated_length=17
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1819..1837
                     /estimated_length=19
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1906..3135)
                     /locus_tag="CPT85_01760"
     CDS             complement(1906..3135)
                     /locus_tag="CPT85_01760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003517040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="DAB26276.1"
                     /translation="MIQAQKGTKDILPDEVSNWQKMESIAQNVFSKANFKEIRTPIFE
                     ATELFARGVGDSTDIVNKEMYTFEKSERSLTLRPENTAGVVRAYIEHGFSRLPQPVKL
                     WYKGPMFRYERPQAGRQRQFHQVGVEMFGTKEPSADAEVINLAVKYLNELGLDNLDIE
                     INSLGCPECRKNYRAAIKEVLKPYLKDLCEDCNFRYEKNPLRILDCKVDSCKAIFEKE
                     EIQKVILGDFICDECKEHFEKVKEYLTALQIPYTVNKLLVRGLDYYNRTVFEIKSNNL
                     GSQNAVCGGGRYDSLVETLGGVQTPAVGWAMGMERLNSLISKPENERLDVFVVAENMT
                     ETFKIMEELRNAGFSAEFDYANRKFKKQLDKAAKSAKYALILMDDEINSGTVTLKNLD
                     TSEQVNVSRSNYLENIK"
     gene            3259..4296
                     /locus_tag="CPT85_01765"
     CDS             3259..4296
                     /locus_tag="CPT85_01765"
                     /inference="COORDINATES: protein motif:HMM:PF01594.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="DAB26277.1"
                     /translation="MDFKNCFTAKNISFTLLVLFIIFLLIKMTDVALLLFCSYVIACS
                     INPFVDKMSQKMPRAAAVSIMIILITLVTLGVFIPIIVMSVNEIREFLNQLPQQIQNI
                     QHFLDTFKVGGQDISQYLNIDTVLDNSANIAKEVIDKSINFTLGIVGVLTILVTIGII
                     VFFLSNDRKEIKEFSLKLFPKSLRERASQVIDDLEIKVGGYVTAQILSISIVGIVVAL
                     CLLVMRVEYAIFLGFISAILDLVPIVGPILSGVLILLVAFPKGWIICTLAIGSLLLGQ
                     FIENNWAKPYFFSKYMDLHPLVVIFSFVVAAKFLGVVGVLIAPAIAAVVVTLFEEIYV
                     KTMNDENESTD"
     gene            4296..>5771
                     /locus_tag="CPT85_01770"
     CDS             4296..>5771
                     /locus_tag="CPT85_01770"
                     /inference="COORDINATES: protein motif:HMM:PF04055.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="DAB26278.1"
                     /translation="MNELTLYTVPEKNPEINIWMAFPAMASFGMSSLGFMSIVKTLDM
                     RSDYFVEKIFTDTKSPRLLTSQVDVMGFSVSFEIDFLGIFDILEKRSIPLKAKDRTED
                     HPIVFGGGPVLTANPEPYCEFFDFIIIGDAENIDTSIIDVIKANKHLPKSEVLKMVAD
                     IKGIYVPSLTEYDEAKGVTKKGGELLSIEKFSAPLSKCISTPVLSEKSFFANTFVIEI
                     VRGCPQRCGFCLASYLNLPARFCDYDQIIAGIDFGLKYTNKIALLGALITAHPRFDDI
                     CRYILKRKADIPHLELSVSSLRADSISPVIIQTLVACGQKHSTIAIEAGSERLRKLIN
                     KNLSEKQIFETVKTAYENGLKGLKIYAMVGHPTETKHDIDEMIALAKKLKTSFKDFDF
                     TFSFATFVPKSHTPFQFCERESVKSLEQKYEYLKKEFHKLGVKIRTSSVKWDYWQALI
                     SRGDRRLCDYLVAVYKDGANLGAFKQTYKNMYKQKLLPPSEE"
     assembly_gap    5772..5790
                     /estimated_length=19
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6366..>7261
                     /locus_tag="CPT85_01775"
     CDS             6366..>7261
                     /locus_tag="CPT85_01775"
                     /inference="COORDINATES: protein motif:HMM:TIGR00722"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26279.1"
                     /translation="MNILKNIKLASDTNRPLCQDTGQVIIFLELGQNLLIHGILLKDA
                     INNAVKRAYIDNYYRKSVVENSLFNRTNTNTNTPVLIYTDIIEGDSININLLIKGAGS
                     ENYSTLKMFKPSASKEEIFEFIKQSVITAGEKSCPPLVLGLGIGSTMDGASVLSKKAF
                     FNSMTQDEQVFSNSLKDYLNASGQEILDVKLCSAATHIACHPVALTINCHSTRHAGCV
                     IKNSKIIYNEINKDYKAIEDKDCHCRRVDTDNIEAIRSLQAGEKILLSGVIYTARDAA
                     HKKISEFYKNNSNFPFSLKDKI"
BASE COUNT         2298 a         1253 c         1232 g         2419 t
ORIGIN      
        1 ttcttaattt tttaaaaatt tttatgaatc acctaaggca attattttaa acttatatac
       61 tttatataaa cataagagat aacacaaaag agagataaaa aactagacta atagatttta
      121 ataaacttaa aacatatatt ggaacgggaa aaggtattta aaacacgagg ctataaaaaa
      181 agcctctttt tttttgctta ttattagann cttattaact ccatccaagg tcaaaatgcc
      241 attcttccgg ttttggattt ttaaaatctc cgccccatct cattccgata gattttgcat
      301 agtcacccag ctttttataa tcgttatatg taccgtttat tatttttaaa tctacagctt
      361 tgccctcaca gtgcaatgac tttgtggctg caacatcggg tcttttcctt ctcaattcag
      421 cttgttctgc aggtgttcta tatccacttg tgattttgat attcaaattt tgagattttg
      481 catattccaa aagctgcatt gtcttttctt gcatagttgg cgtaagctgt gaaattaatt
      541 cgccgttttt ctttccgtac ttgttgtagt catatggtct tatgttttgt gcaacaaatg
      601 gttctggggt gtggtcaact gttgcgctgt ttaacacctc caatatagct ttaaaaaatt
      661 cattttgtct ttgtgtgaaa tcttgcataa tactactgca gaatgaatct atggggtcca
      721 ttgtcatcat tgggccaaaa gagttatata tgccaaggct gtcgggcata gtcattgaag
      781 acatattact tatgccgggc ataaaaccct gattannaga ttaaaattaa atggtatgct
      841 cataacgttc ccttataaat atcccttata tatataaagt aaatttgatg taaaaaattg
      901 acaaaaatga tataatatta aaaaatgtta agaaaacctt ttgaaatagc ttttcatttg
      961 aatgaaaata tatttatgag aaaaatatcg gtaatattgg caatattgtt tttatttgct
     1021 tcaaatccga caaaccctgt attctgcgca gaatcagaag acactgtttc cgtatcaaca
     1081 gaagaagaaa tgtttgcccc ggtagatttg gatcttactg actatactca tttaaataaa
     1141 gaaaacaaaa acaaaaagtt taaactctct gcggaaaaag aaggaaagcc ttcttacgta
     1201 aaaaattccg gtcaaatctg ggacgaagac atgcttttcc gttacaattt ttatgctgac
     1261 agcactaatt tgcgtgtttt gccggcatat ggttctcttg gcagttatgt tacacgcaac
     1321 ctcgatgaaa acacaacagt tatggtcggg caggattata tttctgaaat aaacggtgat
     1381 acagtcaatt tttcttatga cagttattct tattacacta gcggtgcaag aatcgacggc
     1441 caagaaaaga attttaacta ttccgtaggt gctttcaatg agactgatac tcaaaaccag
     1501 gagctcgcag caattgtcag cactaaacca accagtattc taaattcaaa aggtaagttc
     1561 tatgtgggcg gaggggtttt ttctaatctt agaagcgatg tgaatttcaa cacaacaggt
     1621 gcttttgctc agnnnnnnnn nnnnnnnnnt caggtatcaa actcttcata ttccaaaagc
     1681 ggatactccg gctacagcaa agctcatttg cttacaaaat ataaagtcaa tgaccacctg
     1741 actttgaaaa ataagataat aagaaatttt gatgttgatg aaatacaagg agaaatcggt
     1801 gttgtttaca atccgctcnn nnnnnnnnnn nnnnnnnacc agtctcaaaa tgttataaca
     1861 aggcaacgtc tcaaattttc gacatctttt aaattctgat gtttgttatt tgatattttc
     1921 aagataatta cttcttgaga catttacttg ttcagaagtg tcaaggtttt ttaaagttac
     1981 tgttccggaa ttaatttcat catccattaa aatcaaagca tatttggcag acttggcagc
     2041 tttatcaagc tgttttttaa actttctatt tgcatagtca aactctgcgg aaaaaccggc
     2101 gttgcgcaat tcttccatta ttttaaaagt ctctgtcata ttttctgcaa caacaaatac
     2161 atccagtctt tcattttccg gttttgatat caaagaatta agtctttcca tacccattgc
     2221 ccagcctaca gcaggagttt gcactccccc aagtgtttct acgagagaat cgtatctgcc
     2281 accgccgcaa acagcgtttt gtgagccaag attattggat tttatttcaa aaacagttct
     2341 gttataataa tccaatcctc ttacaagcag cttatttaca gtgtagggga tttgtaatgc
     2401 ggtgaggtat tcttttactt tttcaaagtg ctctttgcac tcgtcacaga taaaatcgcc
     2461 aagtataact ttttgaattt cttctttttc aaaaatcgct ttgcaagagt caactttaca
     2521 gtcaagtata cgcaaaggat ttttttcata tctgaaatta caatcttcgc aaaggtcttt
     2581 taaatagggt tttaaaactt cttttattgc ggctctgtaa ttttttctgc attccggaca
     2641 accaagggag tttatttcta tatcaagatt atcgagacct aattcattaa gatattttac
     2701 tgcaaggtta ataacctctg catcagccga aggttctttt gtgccaaaca tttcgacccc
     2761 tacctgatgg aattgtcttt gtcttcctgc ctgtggtctt tcgtatctga acatggggcc
     2821 tttgtaccac aattttaccg gctgtggcag tcttgaaaat ccgtgttcta tataagctct
     2881 tacaacaccg gctgtatttt caggccttag ggtgagtgaa cgttcgcttt tttcaaatgt
     2941 atacatttct ttgttaacaa tatctgtgga atcacccaca cctcttgcaa acaattctgt
     3001 tgcttcaaaa atcggagttc ttatttcttt aaaatttgcc ttggaaaaga cattttgtgc
     3061 aatgctctcc atcttttgcc agttagacac ctcatcaggc aatatatctt ttgttccctt
     3121 ttgtgcttga atcacttttt acctcacaat ttttgattaa actctatcta attatatata
     3181 aaaaacggct atttcaatat actgtaattt atagtagaat cacagggtaa acttttaatc
     3241 aaaagaaacg aggataagat ggattttaaa aactgcttta ccgcaaaaaa tataagcttt
     3301 actctgcttg ttctttttat aatttttctt ttaataaaaa tgacagatgt tgctctgctg
     3361 ttattttgca gttacgtaat agcttgttcc ataaatccgt ttgttgacaa gatgtctcaa
     3421 aaaatgccaa gagcagcggc tgtgtcaatt atgattatat tgattacgct cgttacactg
     3481 ggtgttttta ttccgattat agtcatgtcg gttaatgaga taagagagtt tttgaaccag
     3541 ctgcctcagc aaatacagaa tatacagcat tttcttgata cttttaaggt aggcggacaa
     3601 gatatttcac aatatcttaa tatagatact gtcttggata actctgctaa tattgcaaaa
     3661 gaagtgattg ataaatcaat caactttact ctcggcatag ttggagttct tacaatactt
     3721 gttactatag gtattattgt gttttttctt tccaatgaca gaaaagagat taaagaattt
     3781 tcactcaaac ttttccctaa atctttaaga gaacgtgcat cacaagttat cgatgacctg
     3841 gaaataaaag tcggcggata tgttactgcg cagattctat caatttcaat agtaggtata
     3901 gtagttgcgc tgtgtttgct tgtaatgagg gtggaatatg cgatattttt gggctttatt
     3961 tctgcaatac tcgaccttgt cccgattgtt ggccctattt tatccggcgt attgatattg
     4021 cttgttgctt ttccaaaagg atggattatt tgtacgcttg caatcggttc tttgctgtta
     4081 ggccaattta ttgaaaataa ctgggcaaaa ccgtatttct tttcaaaata catggacctg
     4141 cacccgcttg ttgttatttt ttcatttgtt gtggcggcaa agttccttgg tgtggtcggt
     4201 gtgttaattg ctcctgcaat agcagctgtt gtcgtaactt tatttgaaga aatatatgtt
     4261 aaaactatga atgacgaaaa tgaaagcaca gattaatgaa tgaattgact ttatatacag
     4321 tacctgagaa aaaccccgaa ataaatattt ggatggcatt tcctgcaatg gcttcttttg
     4381 gtatgtcctc tttaggattt atgtctattg tcaaaactct ggatatgaga agcgattact
     4441 ttgttgaaaa aatctttaca gacacaaaat ctccaaggct tctgacttca caggttgatg
     4501 ttatgggatt ttctgtttct tttgagatag attttctagg aatttttgat attttagaaa
     4561 aacgctcaat accattaaaa gccaaagaca gaacagaaga ccacccgata gtttttggcg
     4621 gagggcctgt gcttactgcc aatccggaac cttactgcga attttttgat tttataatca
     4681 ttggtgatgc cgaaaatatc gatacaagca taattgatgt tatcaaagct aataaacatc
     4741 ttccaaaatc agaagtacta aagatggttg ctgacataaa aggtatctat gtgccatctt
     4801 taactgaata cgatgaagcc aaaggtgtta caaaaaaagg aggagaacta ctttctattg
     4861 aaaagttttc tgctccgtta tctaaatgta taagcacacc tgttttgtct gaaaaaagtt
     4921 tttttgcaaa tacatttgta attgaaatag tacgaggatg tccgcagcgc tgcggttttt
     4981 gtcttgcatc ctatctcaat ttacctgcac gtttttgtga ttatgaccaa atcatagccg
     5041 gtattgactt tgggctaaaa tacacaaaca aaattgctct tttaggtgcg cttattactg
     5101 cacaccctag atttgatgat atttgcagat atattttaaa aagaaaagca gatattcctc
     5161 acctggaatt gtctgtttct tcattaaggg ctgactccat atcgcctgta ataattcaaa
     5221 cacttgttgc ctgcgggcaa aaacattcta caattgccat tgaggcaggc tcggaacgtt
     5281 tgagaaaact tatcaataaa aacctgagcg aaaaacagat atttgaaaca gtgaaaaccg
     5341 cttatgaaaa cggactgaaa ggcctgaaaa tatacgctat ggtcggtcat cccactgaaa
     5401 ctaagcacga cattgatgaa atgatagcac ttgcaaaaaa attgaagact tcttttaaag
     5461 actttgattt tactttttct tttgcaactt ttgtgcctaa atctcatact ccgtttcagt
     5521 tttgcgaaag agaatctgta aaatcacttg agcaaaagta cgaatattta aaaaaagaat
     5581 ttcataaact cggtgtaaaa atcagaacat ccagtgttaa atgggattac tggcaggctc
     5641 ttatctccag aggtgataga cgtttgtgtg attatcttgt tgctgtgtac aaagatggtg
     5701 caaatctggg tgcatttaaa caaacttata aaaacatgta taaacaaaaa cttttgcctc
     5761 cttctgaaga annnnnnnnn nnnnnnnnnn aatctcccat gggattttat caaaatgccg
     5821 ccatcaaaag aggctttgat aaaggaatac caaaggcttt tgggtgaatg taacaaagtg
     5881 taaatttagc tttatttttt taagacaaaa agggttgaca ttatttttct tgatgtcata
     5941 ataaatatgt aaggtttaag tgtagtcgaa acactaaata acattttaat aacattaata
     6001 accccgaaca catataaact cctaaataat aaacacaaaa gagaccatta ggatgcagaa
     6061 aacaaaccac ccggacatta ataatctgag tggctttttt ttatttacta aaaaagctta
     6121 taaactcgat atcaaatgat atatttgtga caatattaag tgtatttgtg acaataaata
     6181 acgaatttgc ttttaaatcg tgataagttt atcatgattg aatgattaat gtgcacacag
     6241 atttaattga agacgccgta tataacctgt gtatcagagc aaatacacta tatgacaatc
     6301 atttgtataa cacacttttg tctatgtatg agcagtcatc agatagtgat aaaaagaata
     6361 ggttgttgaa tattctcaaa aacataaagc ttgcttctga tacaaaccgc cctctttgtc
     6421 aggacacagg tcaggttatt atttttcttg aattaggaca aaatctgctt attcacggta
     6481 ttttacttaa agatgctata aataatgctg ttaaaagagc ttatatagac aactattaca
     6541 gaaaatctgt tgttgaaaat tcacttttta accgtactaa caccaataca aatactcctg
     6601 tgttaattta tacagacatc attgagggcg attctatcaa tatcaacctc ctgataaaag
     6661 gtgcagggtc ggaaaactac agtactttaa agatgtttaa gccgtctgcg tccaaagaag
     6721 aaatatttga gtttataaaa caatctgtta ttactgctgg tgaaaaaagc tgtcctcctc
     6781 ttgtgctggg cctgggcatc ggcagcacaa tggatggtgc ctctgttctt tccaaaaaag
     6841 ctttttttaa tagcatgaca caagatgaac aagtcttttc aaacagttta aaagattatc
     6901 ttaacgcctc agggcaggag attcttgatg taaaactatg ttctgctgca acgcatattg
     6961 cctgtcatcc tgttgcttta actattaact gccatagtac ccgccatgca ggttgtgtaa
     7021 ttaaaaattc aaaaattatt tataatgaaa taaataaaga ttataaggct atagaagata
     7081 aagactgcca ttgccgcaga gttgatactg ataatatcga agccatccgt tctttacaag
     7141 caggagaaaa gatactttta tcaggtgtaa tctatactgc cagagacgct gcacacaaaa
     7201 aaatttcaga attttataaa aataactcta acttcccttt tagcctgaaa gataaaataa
     7261 t
//
LOCUS       DABS01000047           20830 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9448, whole genome shotgun sequence.
ACCESSION   DABS01000047 DABS01000000
VERSION     DABS01000047.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 20830)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 20830)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20830
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..961)
                     /locus_tag="CPT85_01780"
     CDS             complement(<1..961)
                     /locus_tag="CPT85_01780"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="DAB26260.1"
                     /translation="MKKEKSSYKDPAGFVCKKDGVVYRQINKCYKENYDFFMQCGLYK
                     KLVEKKYIVAHEEIETDENVDNELYKIIRPQKIDFVSYCYEWSFSMLKDAALLTLKIQ
                     MLALKYGMSLKDASAYNIQFQDGRPVFIDTLSFEKCNEKPWVAYGQFCRHFLAPLLLM
                     VYCDVRLQSLLINYIDGIPLDLASRMLPWRTKLNFAIMLHIHMHAAVQSRYESTSVKK
                     ESNLSVEQKTVIIENLIDLVKSIKWKPQDTEWGDYYTFTNYSDKAMEDKAQIVSRFLD
                     IASVKTCWDLGANNGYFTRIASNKGIKSAAFDIDAVAAEKNYLY"
     gene            complement(986..2752)
                     /locus_tag="CPT85_01785"
     CDS             complement(986..2752)
                     /locus_tag="CPT85_01785"
                     /inference="COORDINATES: protein motif:HMM:PF00929.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26261.1"
                     /translation="MKVIGVNFHKNHNRQSLEKQAPLQLTNKDLKQISRNGMLPYLPD
                     MDKMPYFIPVMTKFVPSFKGDYFENEYTKKVKNKQYQGLGLMENNELGMPEWYDFKKV
                     GSDKILSEPLDWNSATPRDYYVFLQANALAEAYETSWVRRFNYTNCKKPLATLHSICS
                     RNAKEPPSKELKGDIFKDKSFATNISYLIDMKKHRSLDVPITDENNRLCIDAVVFDTE
                     TTGTNNDDETKPLDKIIQIGAIQIKKGKIVDKSAYNCLINPEIHIPEQASAVHGIYDE
                     DVKNAPVMEQVLKHFVNDYLNKKNGIIVAYNSKFDITMLNNAIKEHNSYSADELKPKR
                     YFKVLDPFLLMQRIHPYLGASKKLSKQYAYLFAKNMENAHDAFADVKGTVDVLKYTLY
                     YLSEHRKDKSKPLTLREVLLFQNGCNVANIDIPFDSDRCNDSVNMRASYRPVSLSVDN
                     YHDGYMLTKKHIDELVFEIGQKNASKLRNEIQDEKIDLTGPDGFVINPAETQQKTDEA
                     GMQDAFYVMRSNFKKVLGFAKIEPYADKSKDEIIDIITNKAKHYIHKDSIDLWMKNPN
                     PEDIPEGNDLPDFNIAKRVMTE"
     gene            complement(2961..4736)
                     /locus_tag="CPT85_01790"
     CDS             complement(2961..4736)
                     /locus_tag="CPT85_01790"
                     /inference="COORDINATES: protein motif:HMM:PF13091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26262.1"
                     /translation="MRSNLAIAPVEFGHRLSVSFAASNNNNQYKKNNLKPALPPPKVK
                     TPKSERPVALDDVAFWVAQKIAKKADDAGLSRTDWLLLNIPSLSYVPQVLPEPSKTAM
                     VGKTNVTTLIDGEQIFAKAAEYIKSARDSIQIEMFEFQHPSIDGHIWPSNGADMVSGY
                     DEHKSLLPMILKKKKENPDLKVQIILDAHKWYIDGNGQKRRHYNNQDMIRFLKTNGID
                     VVPYPRPAQGGSALQHVKLVAVDGKKLIIGGMNWGTHSTANHDACVAIETRTENKNSE
                     VDNILEEIFNKDWAFCWQRLGKTKIVAGPLSEDEQQFYKGINKEIKQENVDYMKIVGE
                     LYDNPQDKKRYDENDLSKLDLIKRNPIKDPAIKVLCTKPRELAYIGEKGSESVRDYVM
                     QKVKTAKKLRAELFVLSDKEIIQTIIERVHKGELDAKIIVDPSIIEEFPYCNTAYQKL
                     EENNIDIRQYKTDTKITQRMHGKWAVFDDRELLIGSANWSAMAMNQNLKKGQREDYEK
                     YTEQINREIVGYMKKVEKVEESIGLPPLIRKRLDYKEVLVRRGKIKKAVNEINETGSA
                     LMRLQDAEXKTALRLIQSRAITKLS"
     assembly_gap    3013..3014
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4901..5212
                     /locus_tag="CPT85_01795"
     CDS             4901..5212
                     /locus_tag="CPT85_01795"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26263.1"
                     /translation="MSIFEAGMMVCFGASWPIAAYKTYKCKCVHGKSIHFSMLIMLGY
                     ICGVTHKLLYSLDWVLWLYLANMAFLLTDMILWYKYRNNPAPVEQKTPLEDDAIIDEV
                     E"
     gene            5240..6607
                     /locus_tag="CPT85_01800"
     CDS             5240..6607
                     /locus_tag="CPT85_01800"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01966.20,HMM:PF13286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent phosphohydrolase"
                     /protein_id="DAB26264.1"
                     /translation="MILAILQNRAVVNTQKSIEKKTIYNNFSPKLLISNRLDADIFVP
                     SFKGVEGSDTKKFSTEAMTKENPNWLKAIERYTPVEQKKYEIRTEFERDRNRIMHSEG
                     FDRLRFKTQVFPSPDNDMISTRSSHVFQVTDIARNISKKLGLNEELAEAIALGHDIGH
                     APFGHDGEKSLNKIALTHRLQPFWHEKNSLRMADKFLTLQNSKGQENNLGLTYAVRDG
                     IINHCGEVDENFIKPRKDYINLYDIQKAGQVQPFTWEGIVVKIADKIAYLGRDIEDAS
                     KIGVLNKKNHQELKEILKKHIPDFDAEVNNTTLMSIFVTDLVKNSSPQKGIGFSKPVF
                     NLMNDIKNYNYKNIYLAKDAKKISQQQCDKVLKTIFDNYALMYRKNDTLSFLQKATNP
                     YTNNFSKWIEKYTNNQSKPRNYKNTAVYDMTDYNDYKQAIIDYISGMTDKYALKTYNF
                     FANPS"
     gene            6652..7854
                     /locus_tag="CPT85_01805"
     CDS             6652..7854
                     /locus_tag="CPT85_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009065961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="DAB26265.1"
                     /translation="MLTIDKVKKAELLLKDVVRKTDLIYATALSKNADIYLKSENLQK
                     TGSFKVRGAYAKIAQLSAEQKKRGIIACSAGNHAQGVALSAQKSGIESTIFIPSTAPI
                     SKIEATKSYGAHIRLVDGVYDDAYNEAVKFQKETGAEFIHPFDDIEVIAGQGTIALEI
                     LEQLPEVEAIIVPIGGGGLISGIAYTIKMLKPDCKVYGVQAAGAGSMYHSMELHKRTE
                     LPSVHTFADGTAVKMPGENTFALCEKYVDEIVTVTDDEIATAVLTLMERQKLVAEGAG
                     ALSVAAAMFKKLPINGKKTVCIVSGGNIDVNILSRVINRGLLKAGRIADLTIEMLDKP
                     GQLKEVSRIIADRGANVIRVLHNQGGEDTDINDCYLKVTMETRNLRHLCEIKHALCDA
                     GYKLTDER"
     gene            7858..8232
                     /locus_tag="CPT85_01810"
     CDS             7858..8232
                     /locus_tag="CPT85_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008149461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="DAB26266.1"
                     /translation="MKKVILTQSAPAPIGPYSQAILAGNTLYCSGQIALDAASGEFLN
                     GTIEEQTQKCCENIKEVLKQAGYSFDDVVKTTCFLAHMADFTKFNEVYANYFTSKPAR
                     SCVAVKELPKNGLVEIEVIAVK"
     gene            complement(8216..9442)
                     /locus_tag="CPT85_01815"
     CDS             complement(8216..9442)
                     /locus_tag="CPT85_01815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017352888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein RfbH"
                     /protein_id="DAB26267.1"
                     /translation="MANMIDATLDMWLTAGRFNDTFETEFAKYLGVKYALTTNSGSSA
                     NLLAISALTSHKLGERRLKKGDEVITVAAGFPTTVNPIVQNGLVPVFVDCEIDTYNID
                     VTKIEQAVSDKTRAIFIAHTLGNPFELNKIKESADKYGLWIIEDSCDALGAEYEGQKA
                     GTIGHIGTYSFYPAHHITMGEGGAVVTNDKELYRILMSFRDWGRDCFCKPGKDDTCKR
                     RFQMQLGNLPYGYDHKYTYSHTGYNLKITDWQAACGVAQLRKLPDFLKKRSENALYMN
                     QKLNDLSKYLILPQVNGNVKPSWFGYLISVKPEAPFTKQALVEYLEKNGVGTRQLFAG
                     NILRQPMFVESEIPMRIGNSDLIFSKELNDDYYRLLPNTEFIMNNTFWVGIFPALGKK
                     ELDKTCDLIHKFISQQ"
     assembly_gap    9479..9480
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(9568..10626)
                     /gene="rfbG"
                     /locus_tag="CPT85_01820"
     CDS             complement(9568..10626)
                     /gene="rfbG"
                     /locus_tag="CPT85_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016204509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glucose 4,6-dehydratase"
                     /protein_id="DAB26268.1"
                     /translation="MFEFYKDKKVFVTGHTGFKGSWLCTWLLKCKANVAGFALAPDTE
                     PSLFDILNLENKIHSFTGDITNTVELEEAICSFAPEIVFHLAAQPLVRRSYFEPVLTY
                     QTNVMGTLNVLEAAKKCKTVKAFVNVTTDKCYENKETHQAYKESDTLGGYDMYSSSKA
                     CVEILSSSYRKSFLQGDTDFAMATARAGNVIGGGDWAQDRIIPDCINALKNAQEIEIR
                     NPDAVRPWQHVLEPLAGYLNLAKKLYFNGKEYADAYNFGPDKNSVLTVAELVQKVIDI
                     WGTGSFRINKKDNLHEATLLMLDNSKARAQLHWQPVFTADEAVSKTVRWYKHFYENHN
                     IFDFTVAQIQDYEKTVRG"
     gene            complement(10626..11399)
                     /gene="rfbF"
                     /locus_tag="CPT85_01825"
     CDS             complement(10626..11399)
                     /gene="rfbF"
                     /locus_tag="CPT85_01825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010697210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate cytidylyltransferase"
                     /protein_id="DAB26269.1"
                     /translation="MKVVILAGGLGTRLSEETELKPKPMVEIGGYPILWHIMKIYSHY
                     GFNDFVILTGYKSHVIKEYFINYYNRYSDITVDMNYNTVEVHKTRNEPWRVTMLYTGQ
                     NTQTGGRIKKAQNYIGNEPFLLTYGDGVCNVNINDLVDSHKKSSKIATMTAVQLSGRF
                     GALVIKDDNMITSFMEKPKGEESWINGGFFVCNPEIFDYIPDDDNCVFERSPLENLAR
                     DNQLNAFKHNGFWHAMDNLRDKNELTQMWTSQNAPWKVW"
     gene            11566..13344
                     /locus_tag="CPT85_01830"
     CDS             11566..13344
                     /locus_tag="CPT85_01830"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26270.1"
                     /translation="MAIDSISFGKGLFKRANKKENENKNVQIPEQLSKNDRASLKGIA
                     PYLAAALLMTGSLASCVQQDTDVTVNTDEMMKLLQEMLKAQNETNKYMQQVMELLQNN
                     NTQNADMIKLLQDIMKQNQEITSILTSIGSDVSQIASAVLKISALMEESNKNDQELLN
                     KIDIIIAGQGSDSDKLQQLIDLNTEQNKWLTNIFGLIETLQGSNSDLADVIKNFYNDY
                     KNDMNDFKNNDKDHTELMNKILNTLLSSNEISSDILAQIKQIQQSGQADSAKLDAIIK
                     LLESIDQKLGKIEAAVSNIEGNMTVNGEKLSDLMQQLINDHKEGKLQDKEMMQQMIDL
                     MNRSIDDNNENNGAILKFLAEISEKITNGQMDYEEGFDKIADILNQINGNLTDIKAEV
                     AKIAPQIEKLINQSEENHNETLDMLSKLFDKTSSIDNKLTQIEQNQQEGNKTLVDISQ
                     KLDEANSSLNQINSKMITIDQLKDMFGPMFNEIIDKLEIIGGNQIDIDQLEEVLAKYQ
                     TDLTKTNGLIENLTAVVKDLNLSVDMGPEFQKVIDAINDFKNQEAASAEEQMQAYRDI
                     MEQISKLNNSVDALGATANSIXSKLI"
     assembly_gap    13328..13329
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            13341..14063
                     /locus_tag="CPT85_01835"
     CDS             13341..14063
                     /locus_tag="CPT85_01835"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26271.1"
                     /translation="MNNATTFGTKMVDAMEQVIKGQADSKAAMETYANEYKAYLVQAE
                     QDRMQQIALLQAIVDKEVGGNGGGLTKEELEDVLSNMNINIPDYADILQEISDKIGKV
                     ITSDDLQNFFIKTQPDLTKTNALIENLTAVLKDKNFTITGDLSVEMTEVENLLGKVYD
                     LINNQQTPTNDQIKALISLATQIAENTKQQGGTTASVKTRTASEMDRLYAAINRLSVE
                     AAKSQGKGATYHTHAGMFTFNA"
     gene            complement(14127..16157)
                     /locus_tag="CPT85_01840"
     CDS             complement(14127..16157)
                     /locus_tag="CPT85_01840"
                     /inference="COORDINATES: protein motif:HMM:PF09851.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26272.1"
                     /translation="MSINSTDPVKLQKEQAKIQQQQSKKAAKTAKEQAKIQAEIEKRA
                     AAKALAAEFVTTDFDGRFDIGAIRNDVDKKVEAQLKEYKQMYKAGIMTEAQYKKAKAD
                     LEAAHDYIDSKEWKKAKQSEINAVVTTEVGKLIGKSDATKRGEVKDDVQAALKEMKKN
                     GDITEEQYDAYHSYTKQRSGIGRFFGVKEKESRGAFRAQANRNNVEQTKKNGPQFDAK
                     MQAKLNVAGLSAEDLYKIYDDNGGAVDGTINYSWKKKQPGERDAVLTTLNNNKGQYND
                     FDMGDVKEIGKALGYNVEKKVDGGKVVRDVARGALIGAPGSYVEVSQATNFVGGLIKG
                     GASQSTKIIGVIPAITATAGGVASAITQAHRVEDRAIPTTVPESVKTYQDYTKYLNGL
                     KQDGYATDEGVVLGKSIAKFFTDAQGNLDKAQMNKALAEAAGTVDGVVTPLNYEEAKG
                     LITKLASKPPVIEKPEVKKQEEKVVEKPKTDCTVEVKKYKSAEDTECYEVQAGDNWDA
                     LVVAKYKPKNTADRLAIRTYLKQSYLDEMQNSKDEQTRLKWKDAVVTDGFFPEVYMKD
                     SNGKFVLDENGKKIHNTLCLPKVIPSEIAKGYKYDNKANVEAGTVSEEYKGLSFQPEA
                     TPDRFLKEKANVTACGETIAKDVTVAEAKAKAEAYAKEHSKDKNITIIGLGN"
     gene            complement(16353..19598)
                     /locus_tag="CPT85_01845"
     CDS             complement(16353..19598)
                     /locus_tag="CPT85_01845"
                     /inference="COORDINATES: protein motif:HMM:PF02415.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26273.1"
                     /translation="MRKTKVKEIKKYVVLSLAVLLLGAGAAFSATDWQGVQNEINGAT
                     GDSVDINIENDMYTNNTPLNLGAPPVPSINITGTIKQDGNNPTITAGDQGGTSSSYII
                     NNGANTTITNVNFANGHTTNANGGAIVNSSQITVQSTNPAQKVVISGNMAEGANGGAI
                     SNSGTATFDNVLFSGNSATGDGNGLGGAIYNRSDVGGTSLTVTNSIFEQNTANAFGGA
                     IINLNGSVVIDSTQFNNNSTTSSSGVVGQGGAIVNAANMEISNSSFTGNHTGNYGGAI
                     SNTLQATSDSMHDMLLNITNTTFDGNYSGSGGGAINNAGGSHNVVSGSDAIFSNTINI
                     YEGTKFTNNYVTGSGTGGAIRNSSGNIAGTDPNGIVNIYGKEGNEVVFQKNIAASGGA
                     IANQGTMNIDNAVFDQNGGSREVSTGNTVTTTNGGAIYNNSDSTAGAKEAVVTVSNST
                     FTNNQANSGGAVYNNSGTVNIIDSDFSGNKAQNSTLGGAVYGAANSNTVLRAQNRDMN
                     VGNEQSLADVNNVTDTITLATDAVGNLQASAGRNLNIYSHINGNNHSVLNVNNDYVVK
                     KEDGTDDQTLTSEGNVVIKNGAKVSNTNITVHNGVMHFENDEGLNNNQNIVTLNGGTL
                     STLNGVVTDFHLXISKDSSLLLDVDLGGETNGGTPTMDTLLKDNIGNVDITNDAKLII
                     AGMKSLSEAKEETVKILFTDAEKLIGNVNLGNGANIVEAPINKYQVTQITQPVGGPAP
                     ADGTDPGEYFQFTKVGNSDSIIAGPVAAQAAFLIMDNLYRQSFANMDMVTLMSPEQRM
                     AWKMRNKYANAGYHTGVYAPNVIPEERDGWYMRPFTNFENVPLKNGPRVSNVSYGSLF
                     GGESDLIDLGHGWDGNFSFFGAYHGSHQAYNGVSIYQNGGTIGGVATAYKGNFWTGIT
                     ANVGASAARATHMFGSDDFPILMTGAAWKSGYNWGLFNNKLVIQPSYMMSYTFVNVFD
                     YTNSAGVKVTQDPLNAIEIIPGLRIIGNLKNGWQPYLGVNMTWNIMDKTKFYANEVAL
                     TQLSVKPYIEYGAGIQKRYGDRFTGFGQAMLRNGGRNGIAFTLGFRWALGN"
     assembly_gap    17689..17690
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(19770..20696)
                     /locus_tag="CPT85_01850"
     CDS             complement(19770..20696)
                     /locus_tag="CPT85_01850"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26274.1"
                     /translation="MIRLDIDLSYLTKNFEIGTQRLNQYGAKSIDEIMEAEAAQGNTK
                     AADFQQDVINDPKQLVKLFKLSNAKNRYAILSQMNSQDLEYIAQFLTPEDLQMGLMFF
                     TKTKILNLIYDLPKNKICSIVFQAFSAEQFLKMIPEKELNKFFESDKLDKNKILDFVK
                     TIPEEKLNKMVEKYMFQEEGKLQEDNNWSKEHVVKWLDQLKPEKFKKALQCFEREEKQ
                     SLILNLTKEDKNLFTEFSKNALTFPLKQLDKGDIVKCMDKLEPDDLMKMVNELPDELL
                     AVVVTQIDPMVFAELLSKNFQDVLAEIGIGNI"
BASE COUNT         6423 a         4039 c         3609 g         6751 t
ORIGIN      
        1 tatataaata attcttttct gcagcaacag catcgatatc gaatgcagcg ctttttatgc
       61 ctttattgct tgcaattctt gtaaagtatc cgttatttgc acccagatcc cagcaagttt
      121 ttactgaggc gatatctaaa aatctggaca ctatctgtgc tttatcttcc attgccttgt
      181 cagaataatt ggtgaatgta taataatcgc cccattctgt gtcttgaggt ttccatttta
      241 ttgatttcac aaggtcaata aggttttcta tgattacggt tttctgctca acagacagat
      301 tactttcttt tttgaccgat gtgctttcat atcttgactg cactgcagcg tgcatgtgta
      361 tgtggagcat tattgcaaaa ttgagttttg tccgccatgg aagcatacga gaagccaaat
      421 caagtggaat tccgtctata tagtttatta aaagcgattg aagacgcaca tcgcaataaa
      481 ccattaaaag caacggagca agaaaatgtc tgcaaaactg cccgtatgca acccatggtt
      541 tttcattgca tttttcaaaa gacagagtat ctataaaaac aggtcttccg tcttgaaact
      601 gaatattata agcgctggca tcttttaaag acatgccgta ttttagtgcg agcatttgta
      661 tttttaaggt caacaatgct gcgtctttga gcatagaaaa tgaccattcg taacagtaag
      721 agacaaaatc aatcttttgc ggccggatta ttttgtacaa ttcattatca acgttttcat
      781 cggtttcaat ctcttcatga gcaacaatgt attttttttc aacaagtttt ttatacagtc
      841 cgcactgcat aaaaaagtcg tagttttctt tataacattt gtttatctgt ctgtagacaa
      901 ccccgtcttt tttacaaaca aaccctgccg ggtctttgta tgaagatttt tcctttttca
      961 taagaataat aataacaaaa tatatttatt ctgtcataac acgttttgca atattaaaat
     1021 caggaaggtc atttccctca ggtatatcct cagggttagg atttttcatc cacaaatcaa
     1081 tagaatcttt atgaatataa tgttttgcct tgtttgttat aatgtcaata atctcgtctt
     1141 tagatttgtc agcatatggc tctattttag caaagccaag tacttttttg aaattcgaac
     1201 gcataacgta aaatgcatct tgcatgcctg cctcatccgt tttttgctgt gtttccgcag
     1261 ggtttataac aaagccgtca ggtcctgtca ggtctatttt ttcatcttgt atttcatttc
     1321 tcaatttact tgcatttttc tgcccgattt caaaaacaag ttcatcaata tgttttttgg
     1381 taagcatata gccatcatgg taattgtcca cggaaagaga aacaggcctg tatgacgcac
     1441 gcatgttaac agaatcattg catctgtccg aatcaaaagg tatatcgata ttcgcaacat
     1501 tacaaccgtt ttggaaaagc aaaacttctc ttaaagtaag aggttttgac ttatcttttc
     1561 tgtgctctga cagataatac aaagtgtatt taagcacatc aacggtacct tttacgtcag
     1621 caaaggcatc gtgtgcgttt tccatatttt tggcgaaaag ataggcatac tgttttgata
     1681 gtttttttga agcgcccaaa taaggatgaa tacgctgcat taacaaaaac gggtcaagta
     1741 ctttaaaata gcgttttggc ttcaattcat ccgcagaata actgttatgc tcttttattg
     1801 cattattcag cattgtgata tcaaattttg aattgtatgc aacaataata ccgttttttt
     1861 tgtttaagta atcatttaca aaatgtttta aaacctgttc cattacagga gcgtttttta
     1921 catcttcatc atagatgcca tgcactgcgc ttgcctgttc gggaatgtgt atctctggat
     1981 taataagaca gttataagct gatttatcaa ctattttacc tttcttaatt tgtatggctc
     2041 caatctggat tatcttatca agaggttttg tctcatcatc attattggta ccggttgttt
     2101 ctgtatcaaa gaccaccgca tcaatacaca gcctgttgtt ttcatctgtt ataggaacat
     2161 ccagtgacct gtgctttttc atgtcaataa gatatgaaat atttgtggca aacgatttat
     2221 ctttaaaaat gtcgcctttc agctcttttg acggaggttc cttggcattg cgtgagcata
     2281 tggagtgcaa agtcgccaga ggttttttgc aatttgtgta attaaatcgc cttacccagc
     2341 ttgtctcgta ggcttcggcc agagcatttg cctgcaaaaa cacataataa tccctcggtg
     2401 ttgcactgtt ccaatcaaga ggttcgctca atattttatc tgaacccact tttttaaaat
     2461 cataccattc gggcatacca agctcattat tttccattag cccaagccct tgatattgtt
     2521 tgtttttaac cttctttgtg tattcatttt caaagtaatc acctttgaag ctcggcacaa
     2581 attttgtcat taccggaata aaatatggca ttttatccat atccggtaga taaggcagca
     2641 ttccattgcg tgaaatttgt tttaaatcct tgtttgtaag ctgcaaagga gcctgttttt
     2701 caagagattg cctgttatga tttttatgaa aatttacacc aataaccttc atcagccctc
     2761 caaattcagc tttgcacctg acatttccga cggataaagt atatcctttc ctcttgaaag
     2821 caccttatca tattcagatt cagagtgttt ccagtctttt tcaaattgtc ttaaaaaaac
     2881 tctcgcaagt gccggttttt caaatgctat tgccgcctcg ttatttccgc gtttgtattt
     2941 ttctttagcg ttatttctgt ctatgataat tttgtaatag cccttgattg tattaagcgc
     3001 agagcggtct ttnnttcagc gtcttgaagc cgcataagag cagaacccgt ttcattgatt
     3061 tcatttacgg cttttttgat ttttcctctc ctgacaagca cctctttata atcaagacgt
     3121 tttcttatca atggaggaag acctatagat tcttccactt tttcaacttt tttcatatac
     3181 ccgacaattt ctctgttgat ttgttcggta tatttttcat agtcctctct ctggcctttt
     3241 ttcagatttt gattcattgc catggccgac cagtttgcag agccgattag cagctctctg
     3301 tcatcaaaaa ctgcccattt gccgtgcata cgctgggtaa tttttgtatc agttttatat
     3361 tggcgtatat caatattgtt ttcttccaat ttttggtatg cagtattaca atacggaaat
     3421 tcttctatga tagaggggtc aacaataatt tttgcatcca gttctccttt atgcactcgc
     3481 tcgattattg tttggataat ttctttgtct gaaagaacaa aaagctctgc tctaagtttt
     3541 ttagctgttt tcaccttttg cattacataa tctcttacag attcactgcc cttttctccg
     3601 atataggcaa gctctcttgg ctttgtacag agcactttta ttgcagggtc ttttatagga
     3661 ttgcgtttaa tcaaatcaag ctttgacagg tcattttcat cgtagcgttt tttatcttgc
     3721 ggattatcat acaattcgcc gactattttc atataatcga cattttcctg tttaatttct
     3781 ttattaatac ctttataaaa ctgttgctca tcttctgaca gagggcctgc gactattttt
     3841 gttttgccca gcctttgcca gcaaaatgcc cagtctttat taaaaatttc ttcaagaata
     3901 ttatccactt cggagttttt gttttcagtt ctggtttcta ttgcaacaca cgcatcatga
     3961 tttgcagtag aatgagtgcc ccagttcatg ccgcctataa taagcttttt accgtccaca
     4021 gcaacaagtt ttacgtgctg caaagcagat ccgccctgtg ccggccgtgg atatggaaca
     4081 acgtcaatac cgttagtttt caggaatctt atcatatcct gattattgta atggcgccgt
     4141 ttttggccgt ttccatctat ataccatttg tgcgcatcaa gaattatttg aacctttaaa
     4201 tcaggatttt cttttttctt tttaagaatc attggtaaaa ggctcttgtg ttcatcataa
     4261 ccggacacca tatccgcacc gttagaaggc cagatatgcc cgtctataga aggatgctga
     4321 aactcaaaca tttctatttg tatagaatct cttgcgcttt ttatatattc agctgctttt
     4381 gcaaatatct gttcaccatc aataagggtt gttacatttg ttttgccaac cattgcagtc
     4441 ttggaaggct ccggcagaac ctgcggcaca taagagagag aaggaatatt caataaaagc
     4501 caatctgtac gggaaagccc ggcatcatct gcttttttgg caattttttg tgcaacccaa
     4561 aacgccacat catccagtgc aacaggacgt tcactttttg gcgtttttac ttttggcggc
     4621 ggcagcgccg gttttaaatt gtttttttta tattgattat tattattgga cgcagcaaag
     4681 ctgacactca agcggtgtcc aaactccaca ggtgcaatag caagattact cctcatacgt
     4741 gtagacctta cgttctgcta tggttctatt atgaagattt gtgcagtgtt gtgcaatact
     4801 tcattacaaa aacattacat ttaaattaga ctggcctctt tacaaaaaaa aatatagagc
     4861 aataatatta gtgttgaaat tacacttaaa ggaaaatcaa atgagtattt ttgaagcggg
     4921 aatgatggta tgttttggag caagctggcc gatagcagcc tataagacat ataaatgcaa
     4981 atgcgtacac ggtaaaagta tacatttttc aatgcttata atgctcggct atatttgtgg
     5041 agttactcat aagttactgt attctcttga ttgggttttg tggctttatc ttgcaaacat
     5101 ggcttttttg ctcaccgata tgattctgtg gtacaaatac cgaaacaatc cggcacctgt
     5161 tgagcaaaaa actccgctag aggatgacgc aataattgat gaagttgaat aactctgcga
     5221 aaaatgctat aaataaatca tgattttagc gattttacaa aacagagctg ttgtcaatac
     5281 gcaaaaaagt attgaaaaaa agactattta taacaatttt tcgccaaaat tattaatctc
     5341 aaacaggctc gatgccgata tatttgtgcc ttcattcaaa ggggtagaag gttctgatac
     5401 aaaaaaattc agcaccgaag caatgacaaa agaaaatcca aattggctta aagcaataga
     5461 aagatatacg cctgttgagc agaaaaaata cgaaataaga acagagtttg aacgtgacag
     5521 aaaccgtatc atgcattcag aaggttttga caggctgcgt tttaaaacac aggtcttccc
     5581 ttctccggac aatgacatga tatcaacaag gagctctcat gtttttcagg ttacagatat
     5641 agcacgtaac ataagcaaaa aactgggact caatgaagaa ctggcagaag caatagccct
     5701 tggccacgat attggtcatg caccgttcgg acatgacggg gaaaaatcgc tgaacaaaat
     5761 agcactcact cacagactgc aacccttctg gcacgaaaaa aacagcttga gaatggcaga
     5821 caaatttctc acacttcaaa acagcaaagg tcaggaaaat aacctgggtc tcacatatgc
     5881 tgtaagagac ggtataatta atcattgcgg agaggttgat gaaaatttta ttaagccccg
     5941 aaaagactac ataaatctgt atgatataca aaaagccggt caggtacagc cttttacgtg
     6001 ggaaggcatt gtagttaaaa ttgcagacaa aattgcatat cttggcagag atattgaaga
     6061 tgcatcaaaa ataggggttt taaataaaaa aaatcaccag gagctgaaag agattttgaa
     6121 aaagcacata cctgattttg atgcagaggt taacaataca acactaatga gtatttttgt
     6181 gacagacctt gtaaaaaact cttcacctca aaaaggcata ggtttttcaa aacccgtgtt
     6241 taaccttatg aatgacataa aaaattacaa ctacaagaat atttatcttg caaaagatgc
     6301 aaaaaagatt tcacaacagc aatgtgacaa agttttgaaa actatttttg acaactatgc
     6361 attaatgtac agaaaaaatg acaccttgag ctttttacaa aaggcaacta acccttatac
     6421 aaataatttc agtaaatgga tagaaaaata taccaataac caatcaaaac cacggaatta
     6481 caaaaataca gcagtgtatg acatgacgga ctacaatgac tataaacagg ctattataga
     6541 ttacatttcc ggtatgacag acaaatatgc actgaaaact tataatttct ttgcaaaccc
     6601 gtcttaaaat tgatatatta aaaatactat ataattaaga cggagtttaa gatgctgaca
     6661 atagacaagg taaaaaaagc cgaactgtta ttaaaagatg ttgtaagaaa aacagacctt
     6721 atatatgcaa ccgcattatc taaaaatgca gatatatacc ttaagtctga aaacctccaa
     6781 aaaacaggtt cttttaaggt aagaggcgca tacgcaaaaa tagcacagct ctctgctgaa
     6841 caaaaaaaac gcggaattat tgcttgttcg gcaggcaacc atgcacaggg agttgcgctg
     6901 tccgctcaaa aaagcggcat agaatcaact atattcatac ccagtacagc acctatttca
     6961 aaaatagaag cgacaaaaag ctacggtgcc cacattcgac ttgttgacgg tgtttatgat
     7021 gacgcatata acgaagcggt aaaattccaa aaagaaacag gcgcagagtt tatccatccg
     7081 tttgatgaca tagaagtcat tgccggtcag ggcactatcg cactagagat tctggaacag
     7141 ctgcctgaag ttgaagcgat aatagtacca attggcggcg gtggtttaat ctcaggaatt
     7201 gcttatacaa taaaaatgtt aaaacccgac tgcaaagtat acggcgtaca ggcagcaggt
     7261 gcaggaagca tgtaccattc tatggagctg cacaaacgca cagaacttcc ctctgttcat
     7321 acttttgcag atggcacagc agtaaaaatg ccgggagaaa atacatttgc actgtgtgaa
     7381 aaatacgtag acgaaattgt tactgttaca gatgatgaaa tagcaacagc agtgcttaca
     7441 ctgatggaaa gacaaaaact tgttgcagaa ggcgcaggcg ctttgagtgt tgctgctgca
     7501 atgtttaaaa agcttccgat taacggcaaa aagactgtat gcatagtgtc cggcgggaat
     7561 attgatgtaa atattctttc tcgtgtaata aacagaggtt tgttaaaagc aggcagaatt
     7621 gcagacctga caattgaaat gctggataaa cccggacaat taaaagaggt atcgagaatc
     7681 atcgcagacc gcggagcaaa tgtaatccgt gtattacata accaaggcgg cgaagataca
     7741 gacataaacg actgttattt aaaagtaaca atggaaacac gcaacctgcg tcacctttgc
     7801 gaaataaaac acgcattatg cgatgcggga tacaaactta ctgatgaaag gtaaattatg
     7861 aaaaaagtta tattaacaca atcggctcca gcacctatag gcccgtattc tcaggcaatt
     7921 cttgcaggaa acactttata ttgctcagga caaattgctc tggatgctgc gtctggtgaa
     7981 tttttaaacg gaacaataga agagcagaca caaaaatgct gtgaaaatat aaaagaagta
     8041 cttaaacagg ccggttattc ttttgatgat gtagttaaga ccacttgttt tcttgctcat
     8101 atggcagatt tcacaaaatt taacgaagta tatgcaaact atttcacatc aaagccggcc
     8161 cgctcctgtg ttgcagtaaa agagcttccc aaaaacggac ttgtagaaat tgaagttatt
     8221 gctgtgaaat aaacttgtgg attaaatcac aggttttatc aagctctttt tttccaagcg
     8281 cagggaaaat cccaacccag aaggtattat tcataataaa ttctgtgttt ggcaaaagtc
     8341 tgtaataatc atcattcagc tcttttgaga atatcaaatc agaattgcct atcctcatag
     8401 gtatctctga ttccacaaac atgggctgac gaagaatatt acctgcaaat aactgacgcg
     8461 ttcccacccc gtttttttca agatattcga caagagcctg tttagtaaaa ggtgcctccg
     8521 gttttacgga aattaaatac ccgaaccacg aaggcttaac attgccatta acctgcggta
     8581 gtataagata ttttgacagg tcattgagtt tttgattcat ataaagagca ttttcactcc
     8641 tttttttaag aaaatccgga agcttgcgca gctgtgcaac accgcatgcc gcctgccagt
     8701 cggtaatttt aagattatat cccgtatgag aatatgtata tttgtggtca tatccatagg
     8761 gcaaattacc gagctgcatt tgaaaacgtc ttttgcaagt atcatcttta ccgggtttgc
     8821 aaaaacaatc tctgccccaa tcacgaaaag acattaaaat tctgtaaagc tctttatcat
     8881 ttgtcacaac agctccgcct tcacccattg ttatgtgatg cgccggataa aagctgtatg
     8941 ttccaatatg gccgattgtg ccggcctttt ggccctcata ttctgcgccc agtgcatcac
     9001 agctgtcttc tattatccac aggccgtatt tatcagcgct ttcttttatt ttattaagtt
     9061 caaacggatt gcccagtgta tgagcaataa aaattgcacg ggttttatca gacacagcct
     9121 gttctatttt tgtaacatca atattataag tatcgatttc acaatccaca aacacaggca
     9181 ccaggccgtt ttgaacaata ggattaacag tcgtggggaa tcctgcggca acagtaatta
     9241 cttcatcacc ttttttaagc cttctttcgc ccagcttatg tgaggttaaa gcactgatgg
     9301 caaggaggtt tgcgcttgag ccggaatttg ttgtcagagc atattttaca ccgagatact
     9361 ttgcaaattc tgtttcaaaa gtatcattga aacggcctgc agtaagccac atatcaagag
     9421 ttgcgtctat catgtttgcc atttcttcaa agccaagcag tttgcctgac gccggaatnn
     9481 tttaaagttt ctttttttat tcaaaattgt attgtaataa agctttgctg atgcttttac
     9541 aaagtttcgg agaagttttt ccatggctta tcctctcaca gtcttttcat agtcttgtat
     9601 ttgagcaact gtaaaatcaa atatattatg attttcataa aaatgcttgt accatctcac
     9661 agttttagaa acagcctcat cagccgtaaa tacaggctgc cagtgcagtt gagcacgtgc
     9721 tttactgttg tccagcataa gcagtgttgc ctcatgcaag ttatcttttt tattgattct
     9781 aaaactgcct gtcccccaga tatctataac tttttgtaca agctcagcca cagtcagaac
     9841 agagttttta tctgggccaa aattgtatgc atcagcatac tctttgccat taaaatacaa
     9901 ctttttagca agattaagat atcctgccaa aggttccagc acgtgctgcc atggtctcac
     9961 tgcatcaggg tttcgaattt caatttcctg tgcgtttttt agtgcattga tacaatcagg
    10021 gataattctg tcttgtgccc agtccccccc gcctatgaca ttaccggccc ttgctgtagc
    10081 catagcaaaa tccgtgtctc cttgcaaaaa gcttttcctg tatgaggatg acaaaatctc
    10141 cacacacgct tttgaagatg aatacatgtc atatcctcca agagtgtctg attctttata
    10201 agcctgatgt gtttctttgt tttcgtagca cttatcagtt gttacattta caaaagcttt
    10261 aactgttttg catttttttg ccgcctcaag aacgtttaat gtacccatta catttgtttg
    10321 ataagttaaa acgggttcaa aataagatct tctgacaaga ggttgtgctg caagatgaaa
    10381 aacaatttca ggagcaaaag agcaaattgc ctcttcaagc tcaacagtat tggttatatc
    10441 accggtgaag ctgtgtattt tattttctaa attgagaata tcaaacaaag acggctctgt
    10501 atcaggggca agtgcaaacc ctgcaacatt tgctttgcat tttaaaagcc acgtacaaag
    10561 ccaggaacct ttaaatcctg tatggccggt aacaaatact tttttatcct tataaaattc
    10621 aaacattacc agaccttcca aggagcattt tgagaagtcc acatttgagt aagctcattt
    10681 ttatccctca aattatccat agcatgccag aagccattgt gcttgaaagc attaagctga
    10741 ttatctcttg caagattttc cagaggagaa cgttcaaaaa cgcaattatc atcatccggt
    10801 atatagtcaa aaatttcagg attacacaca aaaaatccgc cgttaatcca ggattcttct
    10861 ccttttggtt tttccataaa ggaggtaatc atattgtcgt ctttaataac aagagcccca
    10921 aatctgccgg aaagctgtac agctgtcatt gttgcaattt ttgaagattt tttatgtgaa
    10981 tcaacaaggt catttatatt cacattacaa acaccatcac cgtatgttaa caaaaacggc
    11041 tcattaccta tatagttttg tgcttttttt atccttccgc cggtctgagt attctgccct
    11101 gtataaagca ttgtaacacg ccagggctca tttcttgttt tatgaacctc tactgtgtta
    11161 taattcatat ccacggtgat atcagaatat cgattgtaat agtttataaa atactctttt
    11221 ataacatggg acttataacc tgttaagata acaaaatcgt tgaatccgta atgtgaatat
    11281 attttcataa tatgccacaa tattggataa ccgcctatct caaccattgg tttaggcttg
    11341 agctctgtct cttcactgag acgggtaccg aggcctcccg ctaaaattac aaccttcata
    11401 gatatctccg ttaaataaat atattccatt atagagtaaa tttcgaaccg caattgtaaa
    11461 ctttttttaa cattaaaaaa aacatgcgca atttttattt ttcaggagta ttattttatt
    11521 tgccacaaca attaataaca atttaacaaa aggagtaggt ataaaatggc tattgacagc
    11581 atcagttttg gaaaaggtct ctttaaaaga gcaaacaaaa aagaaaatga aaacaaaaat
    11641 gttcaaatcc ctgaacaatt atcaaaaaat gatagagctt cgttaaaagg tattgcacca
    11701 tatttggcag ccgcattatt gatgacaggt tctctggcaa gctgtgttca acaagataca
    11761 gatgtaactg ttaacacaga tgaaatgatg aaacttttac aagaaatgtt aaaagctcag
    11821 aatgaaacaa ataaatacat gcagcaagtg atggaattgt tacaaaataa caatactcaa
    11881 aacgctgata tgattaaact tttacaagat atcatgaaac agaaccagga aattacatca
    11941 atccttacaa gtattggttc tgatgtaagc caaattgctt ctgctgtttt gaaaatttct
    12001 gctttgatgg aagaatccaa taaaaacgat caggaattgt taaataaaat cgatattatt
    12061 attgcaggtc aaggttctga ttcagataaa ttgcagcaat taatcgattt gaacactgaa
    12121 caaaacaaat ggttaactaa tatctttggc ttgattgaaa cattacaagg ttcaaacagt
    12181 gatctagcag atgttatcaa aaacttctat aacgattaca aaaacgatat gaatgatttc
    12241 aaaaacaacg ataaagatca tacagaattg atgaataaaa ttctcaatac attgctttcc
    12301 agcaacgaaa tcagctctga tatcttggct caaatcaaac aaattcaaca aagcggccaa
    12361 gctgattcag caaaattgga tgctatcatc aaattgttag aaagcattga ccaaaaactc
    12421 ggtaaaattg aagcagctgt aagtaatatc gaaggaaata tgactgttaa tggcgaaaaa
    12481 ctttctgacc ttatgcaaca gctcatcaat gatcataagg aaggtaagct tcaagataaa
    12541 gaaatgatgc agcagatgat tgatttgatg aacagatcaa ttgatgacaa caacgaaaac
    12601 aacggtgcaa tcctcaaatt cttagctgaa atttctgaaa aaattacaaa cggtcaaatg
    12661 gattatgaag aaggatttga taaaattgca gatatcttga atcagattaa cggcaactta
    12721 acagatatca aagcagaagt tgctaagatt gctcctcaga ttgaaaaact tattaaccaa
    12781 tctgaagaaa atcacaacga aacactggat atgttatcaa aactctttga taaaacatct
    12841 tcaattgaca acaaattaac tcaaattgaa caaaatcaac aggaaggcaa caaaacatta
    12901 gttgatattt ctcaaaaatt agatgaagca aactcaagct tgaaccagat aaactctaaa
    12961 atgattacta tcgatcagtt gaaagatatg tttggcccta tgttcaacga aatcatcgat
    13021 aagctggaga ttatcggtgg aaaccagatt gacatcgacc agttagaaga agttcttgct
    13081 aaatatcaaa cagatttgac aaaaactaac ggcttaatcg aaaacttaac agctgtagtt
    13141 aaagacctca acctctctgt tgatatgggt cctgaattcc aaaaagttat tgacgcaatc
    13201 aatgatttca aaaaccagga agctgcatca gctgaagaac aaatgcaagc atacagagac
    13261 ataatggaac aaatctctaa actcaataac agtgtagatg ctctcggtgc aactgcaaac
    13321 agcatcannt caaagctcat atgaacaatg caactacttt tggtacaaag atggttgatg
    13381 caatggaaca ggttatcaaa ggtcaagctg acagcaaagc tgcaatggaa acatacgcaa
    13441 acgaatacaa agcttacctt gtacaagcag aacaagacag aatgcaacaa atcgcattgt
    13501 tacaggctat cgttgataaa gaagttggcg gcaacggcgg cggcttaaca aaggaagaat
    13561 tagaagacgt tctttctaat atgaatatca acattcctga ctacgctgat attttacaag
    13621 aaataagcga taaaatcggt aaagttatta caagtgatga tttacaaaac ttcttcatca
    13681 aaactcaacc tgatttaaca aaaactaacg ctttgattga aaacttaact gctgtattaa
    13741 aagataaaaa ctttacaata accggtgacc tttctgttga aatgacagaa gttgaaaacc
    13801 tcttaggtaa agtttatgac ttaatcaaca accaacaaac acctacaaac gatcaaatta
    13861 aagccttaat ttcattagct actcaaattg ctgaaaacac taaacaacaa ggtggtacaa
    13921 cagcaagcgt aaaaacaaga acagcttctg aaatggacag actctatgca gctatcaaca
    13981 gactctctgt agaagcagct aaatctcaag gcaaaggtgc aacatatcat actcacgcag
    14041 gtatgtttac attcaacgct taataaaata aatcaaataa aaaagacccc tgatatttct
    14101 atcagaggtc tttttttatt ggtttattaa ttgcctaatc caatgattgt tatgttttta
    14161 tcttttgaat gttctttggc atatgcttct gcttttgctt ttgcttcagc tactgttaca
    14221 tcttttgcga tagtttcacc acaggctgta acatttgctt tttctttcaa gaatctatca
    14281 ggtgttgctt caggttggaa agataaacct ttgtattctt cagacacagt acctgcttct
    14341 acatttgctt tattgtcata tttataacct tttgcaattt ctgatggaat aactttaggt
    14401 aagcaaagtg tattgtgtat ttttttgcca ttttcatcaa gaacaaattt tccgtttgag
    14461 tctttcatgt atacttcagg gaagaaaccg tctgttacaa ctgcatcttt ccattttaat
    14521 cttgtttgtt cgtctttgct gttttgcatt tcatcaagat aagattgttt aagatatgta
    14581 cgtattgcta aacgatctgc agtatttttt ggtttgtatt ttgcaacaac caatgcatcc
    14641 cagttgtcac cagcttgaac ttcataacat tctgtatctt ctgcagattt atatttctta
    14701 acttctacag tacaatctgt ttttggtttt tcaacaactt tttcttcctg ctttttaact
    14761 tcaggttttt caattaccgg aggtttagaa gccaattttg taatcaagcc tttagcttct
    14821 tcatagttca aaggagtaac aacaccgtca acagtaccgg ctgcttcagc aagagcttta
    14881 ttcatctgtg ccttgtcaag gttgccttgt gcatctgtga agaattttgc aattgattta
    14941 ccaagtacaa cgccttcgtc agtagcataa ccgtcttgtt tcaaaccatt aagatattta
    15001 gtatagtctt gatatgtttt tacgctttca ggtacagttg tcggaattgc tctatcttca
    15061 actctgtgag cctgcgtaat tgcagatgca acacctccgg ctgtagctgt tattgccggt
    15121 ataacaccta taatttttgt tgattggctg gctccgcctt taattaaacc gccaacaaaa
    15181 tttgtagctt gagacacttc aacatatgag ccaggagcac caataagagc gcctcttgca
    15241 acatctctga ctactttgcc gccgtcaact ttcttttcaa cattatagcc caatgcttta
    15301 ccaatttctt taacatcgcc catgtcaaag tcattgtatt gacctttatt gttatttaat
    15361 gttgttaaaa cagcatctct ttcaccgggt tgttttttct tccagctata gttgatagta
    15421 ccatcaacag caccgccatt gtcatcatag attttataca aatcttctgc gctcagacct
    15481 gctacgttta atttagcctg catttttgca tcaaactggg gtccgttctt ttttgtttgt
    15541 tcaacgttat ttctgttagc ttgtgctcta aatgcacctc ttgattcttt ttctttaact
    15601 ccaaagaatc gtcctattcc gcttctttgt tttgtataag agtgatatgc atcatattgt
    15661 tcttctgtta tgtctccgtt ttttttcatt tcttttaaag cagcttgaac atcgtcttta
    15721 acttcgccgc gttttgttgc atcagattta ccaatcaatt tgccaacttc tgttgttacg
    15781 actgcattaa tctcgctttg tttagccttt ttccattctt ttgaatcaat ataatcatga
    15841 gctgcttcta aatctgcttt agctttttta tattgagctt ctgtcattat gccggctttg
    15901 tacatttgtt tgtattcttt tagctgagct tcaacttttt tgtccacatc gtttctgatt
    15961 gcaccgatgt cgaaacgtcc atcaaaatca gttgtaacaa actctgcagc taaagctttt
    16021 gctgctgcac gtttttcgat ttcagcttga atttttgcct gctcttttgc agtttttgca
    16081 gcttttttag attgctgttg ttgaatcttt gcctgttctt tttgaagttt tacaggatct
    16141 gttgaattga tactcatttt aaatcctctc tatagtctta ataatctctc aataaaaaag
    16201 tatatatttc ctctatgctt atataaaaaa tttttgtttt acaaaattgc ctaaaatgca
    16261 tgtgtaacat gcaaaaagca ggcatttcgt ttgctgaaat gcctgctata attgagtttt
    16321 taaaaactaa accaagttta caaatgttaa cattaattac ctaatgccca tctgaaaccg
    16381 agagtaaagg caataccgtt acgtccgccg tttctcaaca ttgcctgacc aaaaccggta
    16441 aatctatctc cgtatctttt ttggatacct gcaccatatt caatatatgg ttttacagac
    16501 aactgtgtca atgctacttc attggcatag aatttagttt tgtccataat gttccaggtc
    16561 atattaacac ccaaatatgg ctgccatccg tttttaagat taccgataat tcttaaacca
    16621 ggaatgattt caattgcatt caacggatct tgcgtaactt ttacaccggc tgagtttgta
    16681 taatcaaaca cattaacaaa ggtgtaactc atcatataac ttggctggat aaccaatttg
    16741 ttgttaaata agccccagtt gtaaccggat ttccaagcag cacctgtcat caagataggg
    16801 aagtcgtcac tgccaaacat atgtgtagca cgtgctgcac tggcaccaac gttagctgta
    16861 atacctgtcc agaagttgcc tttgtaagca gttgcaacac caccgatagt accgccgttt
    16921 tgataaatgc ttacgccgtt ataagcctgg tgagaaccat ggtaagcacc aaagaatgag
    16981 aagtttccat cccagccgtg gcctaaatca ataaggtcag attcgccgcc aaataaagaa
    17041 ccgtatgaaa cgttagatac tctcgggccg tttttcaaag gcacgttttc aaagtttgta
    17101 aacggtctca tataccagcc gtcacgttct tcaggaatta catttggtgc atacacacct
    17161 gtatgataac cagcgttagc atatttgttt ctcattttcc aagccatacg ctgttcagga
    17221 gacatcaaag tcaccatatc catattggca aatgattgtc tgtacaggtt gtccatgata
    17281 agaaatgcag cttgtgcagc aacaggacct gcaataatag agtcagaatt gccaactttt
    17341 gtaaattgga agtattctcc ggggtctgtt ccgtcagcag gagcaggacc acccacaggt
    17401 tgtgtgattt gagttacttg atatttattt ataggcgctt caactatatt agcaccattg
    17461 cccaggttta cattgcctat taatttttct gcatctgtaa acaggatttt tacagtttct
    17521 tcttttgctt ctgacagtga tttcatgccg gcaattatta attttgcatc atttgtaata
    17581 tcaacattgc caatattatc ttttaataaa gtatccattg taggagtacc gccgtttgtt
    17641 tctccgccaa gatcaacgtc taacagcagg ctagaatcct tggatatann taagtggaaa
    17701 tctgtaacaa cgccgtttaa tgtactaagt gtaccgccgt ttaaagtaac gatgttttgg
    17761 ttgttattaa gaccttcgtc attttcaaag tgcattacgc cgttatgcac ggtaatattt
    17821 gtattgctga cttttgcgcc gtttttaatt acaacattac cttcggaagt cagagtctga
    17881 tcatcagtgc cgtcttcttt tttaacaaca tagtcattgt ttacatttaa tacactgtgg
    17941 ttgttaccat tgatatgtga atatatattc aaattacgac cggcagacgc ctgaagatta
    18001 ccgacagcat cagttgcaag agtaatggta tctgtaacat tattaacatc cgccaaactc
    18061 tgttcattac ctacattcat atctctattt tgagctctca gcacagtgtt agaatttgct
    18121 gcaccataca cagcgcctcc aagtgtagag ttttgtgctt tgttgcctga aaaatcagaa
    18181 tctataatat ttacggtacc actattgtta tatactgcac cgccagaatt agcctggttg
    18241 tttgtgaatg tagaatttga aactgttaca acagcttctt ttgctcctgc ggtggaatca
    18301 gagttattat atattgcacc accgtttgta gttgtaacgg tattaccggt tgaaacttca
    18361 cgactgccgc cgttttgatc aaatactgca ttatcgatat tcattgttcc ctggttagca
    18421 attgcaccgc ctgaagcagc aatgttcttt tggaaaacaa cttcattacc ttcttttccg
    18481 tatatattaa ctataccgtt tggatcagtg ccggcaatgt ttcctgagga gtttctgatt
    18541 gcacctccgg taccagaacc tgtaacatag ttattagtaa atttagtacc ttcatatata
    18601 tttattgtgt tggaaaatat agcatctgaa cctgagacaa cattgtgaga accaccagca
    18661 ttgttgattg caccgccgcc tgagccggaa tagtttccat caaaggtagt attagtaata
    18721 ttcaaaagca tatcgtgcat tgaatcactg gttgcctgta aagtgttgga aattgcacca
    18781 ccatagttac cggtatggtt gcctgtaaag gatgaatttg aaatctccat gttagcagcg
    18841 ttaactattg caccaccttg accaacaaca ccggatgatg aggttgttga gttattatta
    18901 aattgagttg aatcaataac aacagatccg ttcaagttaa taattgcacc gccaaaagca
    18961 ttggctgtat tttgctcaaa tatagaattt gtaacagtta aagaggtgcc gccaacatcg
    19021 cttcggttat aaatagcacc gcctaagcca ttgccatcac ctgttgcact gttacctgaa
    19081 aataacacgt tatcaaaagt ggctgtacct gagttagaaa tagcaccacc attggctcct
    19141 tcagccatat tgccggaaat aacaactttc tgtgccgggt tagtggattg aactgtaatt
    19201 tgtgaggagt taacaatagc accgccatta gcatttgttg tatggccgtt agcaaaattt
    19261 acgtttgtga ttgttgtatt tgctccgttg tttataatat aactggagct tgtaccgcct
    19321 tggtcaccag ctgtgatggt cggattatta ccatcttgct tgatagtgcc tgtaatatta
    19381 atactgggaa caggtggagc acctaaattt aaaggtgtat tatttgtgta catatcattt
    19441 tcgatattta tatcaactga atcccctgtt gcaccgttga tttcattttg cactccctgc
    19501 caatctgttg cggaaaaagc agcaccagca cctaataaca aaacagcaag agacagtaca
    19561 acatactttt taatttcttt tacttttgtt tttctcatga ttccaatcca ctttaaagtt
    19621 aaataatttt gattctctaa tatatttacg taaaattaaa tattataaat ttccaagtcg
    19681 tacattttat cattacacaa aaatagcaaa aagttaaaac tttttacaaa aaaagattac
    19741 aaattcgaca caaaaaaata tataaaaaac taaatgttac ctattcctat ttctgcaaga
    19801 acatcctgga agtttttgga taacagctct gcaaaaacca tggggtctat ttgtgtaaca
    19861 acaactgcaa gcagctcatc aggaagctcg ttaaccattt tcatcaaatc atccggctcg
    19921 agcttgtcca tgcattttac aatatcgccc ttatccagct gttttaaagg gaatgtaaga
    19981 gcgtttttcg aaaattctgt aaacagattc ttatcttctt ttgtcagatt taagataaga
    20041 gattgttttt cttctctttc aaagcattgc agtgcttttt tgaatttttc tggctttaat
    20101 tgatcaagcc atttcactac atgctctttg ctccagttgt tatcttcctg cagttttcct
    20161 tcttcttgaa acatgtattt ttcaaccatt ttattcaatt tttcttcagg aatagttttt
    20221 acaaaatcca gaattttgtt tttgtcgagt ttatcggatt caaaaaattt gttgagttct
    20281 ttttccggaa tcattttaag aaattgttct gcggaaaaag cttgaaatac aatagagcaa
    20341 attttatttt tgggcaaatc gtatataaga ttcagaattt ttgtctttgt aaagaacata
    20401 agccccatct gcaaatcttc aggagtaaga aactgagcaa tgtattccaa atcctgagag
    20461 ttcatctggg acaaaatagc atatctgttt ttggcattag aaagtttgaa aagttttaca
    20521 agctgtttgg ggtcattaat tacatcctgc tgaaaatctg cagcttttgt attgccctgt
    20581 gcagcttctg cttccattat ttcgtcaatg ctttttgcac catattgatt taaacgttga
    20641 gtgccaatct caaagttttt tgtcagatag cttaaatcaa tatccagtct aatcatgatg
    20701 gaaaccttgt tctttcaaat ccatttgcca aaactctata taataataaa cggtattttt
    20761 aaaaaaaact taatagcatg atttcaaact gtaacatttc ttaattttat ataaacaaaa
    20821 aggcaattat
//
LOCUS       DABS01000048            5859 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_5407, whole genome shotgun sequence.
ACCESSION   DABS01000048 DABS01000000
VERSION     DABS01000048.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5859)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5859)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5859
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..364
                     /locus_tag="CPT85_01855"
     CDS             <1..364
                     /locus_tag="CPT85_01855"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26034.1"
                     /translation="IYDTLIIVKDTIDKLVGRVNNVKELIETLYTEFAEDYEVKDIIT
                     DLIYLSDSFKNLSDKDFKIAINENIETIKSFKEKELKSHLRSQYKQVNDDDIKAIEQQ
                     IQLKELLKNKNKLRTGDN"
     gene            364..1428
                     /locus_tag="CPT85_01860"
                     /pseudo
     CDS             364..1428
                     /locus_tag="CPT85_01860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004846231.1"
                     /note="sigma factors are initiation factors that promote
                     the attachment of RNA polymerase to specific initiation
                     sites and are then released; primary sigma factor of
                     bacterium; too many ambiguous residues; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
     assembly_gap    906..945
                     /estimated_length=40
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1475..1795)
                     /locus_tag="CPT85_01865"
     CDS             complement(1475..1795)
                     /locus_tag="CPT85_01865"
                     /inference="COORDINATES: protein motif:HMM:PF13146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26035.1"
                     /translation="MKKFITTMALLALTAVFSQNTANATALFYTNATYPLTATGAKAE
                     DLNCLKKGTASTNNILYFIETGDAGIEQAAKNGNIKKITYIDVNEKTVFIFWRKITVT
                     VYGE"
     gene            complement(1811..2185)
                     /locus_tag="CPT85_01870"
     CDS             complement(1811..2185)
                     /locus_tag="CPT85_01870"
                     /inference="COORDINATES: protein motif:HMM:PF13146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26036.1"
                     /translation="MLKKLILSIFIVNVLAQSAHAIGINTSAYYDKGAIFSGSTFPQS
                     TANAVNLPKEQNLQKLKTGYAAKTNFFGLVEIGDSGIDKAAKQANITQIHYVDTTVSK
                     VYIPLLFIPIYAKTTRTTVYGE"
     gene            complement(2532..5351)
                     /locus_tag="CPT85_01875"
     CDS             complement(2532..5351)
                     /locus_tag="CPT85_01875"
                     /inference="COORDINATES: protein motif:HMM:PF00700.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26037.1"
                     /translation="MISVNSDSLSLLVRRNLNTATSNINTSLERMATGYKINRAKDDA
                     ANINIAEHLKTQINSARDLKKGSSMAIDMLSNAEGALIDINNSLLRIRNLTLQQMNGI
                     YDDKAQAAMDAEIQQQIAHIVQTVNKAEFNGRKLFDGSIQDMRIPLYDTTSGLSGLTL
                     DELFKKPDLVDVFTGQKNLYFVDAKAGETYYADFDGKLFAITSAKDQQVTYNYSAGKI
                     EFVDCTGVKAVELGSYDNSYTSLGNGEQYLQMEANKSYYIKSNNKVYELKNTSAVSQV
                     VVFKTDNAGALDIVSGDGVQKNFLYDLSTYTSINSGQALELKAGSTQHYIFNNKLYEI
                     TSTKNQTFIFNNKNGNLNPIAGDDGVTVNLVGNMKTGVTTGVASYIELNPNETKYYEF
                     GGKIYQITNNAASKQNFILDSNNNIKDSNGNIVRTQLATDVLASFTDYANLQSMTVTA
                     GSEYYLKNEDGSGITKITAQEDGVIYFDKSNSGFDKFVGAKVSVTDIIDYEQASLNAS
                     SQFDITVEAGQTKFISINNEIYTVKNDTASDFTKTFTYDASLKTIEEFVDPSIVPQPT
                     PVIGSYIADFSASVAQQPDDKQFLQNFAGTAYVKNGDDIFEITNNGSAQDIVFDIDAQ
                     TGMLVPVNAPGVSVNKMSTAVFSSLNGNNFSSVINPGETQYMMFTINGVQRVYKVTNN
                     SADKQSVIYEKTNGVSITSGDGVVIDEYSDMVRSTGIGNDYFYLDFSTETQKNINING
                     RFYEITNNDGSTALFRINGNNIVQVAGSSASITSKQESTGINSSASQYEIELQPDETK
                     YIKIGDSVYSLVNNTSFKQTQVFNTNGNTLDCVNANISPRGYNLSNTPMQQMLIKTDW
                     AMNSVLNIRASIGAAHNVLEAAISRNTNLEINLTEARSTIMDADFAQESANLVRNQIL
                     QNVSVSLLSQVGNVKRNVVLSLING"
     assembly_gap    5483..5484
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5491..>5859)
                     /locus_tag="CPT85_01880"
     CDS             complement(5491..>5859)
                     /locus_tag="CPT85_01880"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26038.1"
                     /translation="PKGAPIGPQMQEGATPADSNSFKVTYEDYPTVMIPVTLITADHK
                     EIPPGYYRILSAKKENGYFLNFYQGSSLVAKIAAIETGDDHNQKSLNYAKVIPVNDSF
                     MNVIYGDIDCNIEAVVRIKH"
BASE COUNT         1822 a         1040 c         1089 g         1866 t
ORIGIN      
        1 gatctacgat acgttaataa ttgtaaaaga tacaattgac aaattggtcg gacgggtaaa
       61 taatgttaaa gaattaatcg agaccctgta cacagaattt gccgaggact atgaagtcaa
      121 agacataatc acagatttga tatatttatc cgacagtttt aaaaatttgt cggacaaaga
      181 ttttaaaata gctattaatg aaaatattga gactattaaa tcttttaaag aaaaggaact
      241 gaagagtcat ttacgctctc aatacaagca agtcaatgat gatgacataa aagctattga
      301 acagcagatt caattaaaag aacttttaaa aaacaaaaac aagctaagaa ctggagacaa
      361 ttaatgagca gaaaaagaat gtcagacaaa tcactcgtta gcattatcga tgaagatgag
      421 cttcaaacag atgatacaac aggtgatgat ttatttagcg aacccgaaac tataacaaca
      481 gacagtatag atgtaatcat cggaaaatca ggctctacag cagcagacga aatttatatg
      541 cagccttctg atgatatgga cgcagaagac gaacagcaaa ttgcagtccc cagaggtgtt
      601 tcacttgatg accccgttag aatgtactta agagaaatcg gccgtatcaa actattgaca
      661 gctgatgaag aaatcgattt agcaagaaaa atcatacaag gcggaaatat cggcgccatt
      721 gcaaagagaa aactcgttca agcaaacttg agacttgttg tttctattgc aaaaaaatat
      781 gttggacgcg gcatgctctt tttggacctc attcaagaag gaaacctcgg cttgattcgt
      841 gcagctgaaa aatttgacca cgaaagaggc tacaaattct caacttatgc cacatggtgg
      901 attcgnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnngttca catggttgaa
      961 accatcaaca agctgaaaaa agtaacaaga aaacttgctc aagagctttc tagaaaaccg
     1021 accgaagacg agctcgctca agaaatgaac atttctattt caaaattgag agaaatcatc
     1081 aaagtagctc aagagccgtt gtcattggaa actcctatcg gtaaagaaga agactcaaga
     1141 ttgggcgatt ttatcgaaga caaagacgct gatgctcctg tgaaaacagt tgctcacgaa
     1201 cttttaagag aagaccttgc tgaagtttta agcggtcttt ctccacgcga aagagatgtt
     1261 ttaagactcc gtttcggcat ggacgacggc agacaaagaa ctctcgaaga agtgggccag
     1321 ctgttcggtg ttaccagaga acgtatcaga cagattgaag caaaagcttt aagaaaactc
     1381 agacacccca acagaagcaa acgcttaaga gaatacgtag aagtttaatc ataaaaaaaa
     1441 gaggctttaa aaagcctctt tttttattct aagtttattc gccataaacc gttacagtaa
     1501 tttttcgcca gaagataaaa actgtttttt cgttaacatc tatgtatgtt atttttttga
     1561 tattgccgtt tttcgcagcc tgttcaatgc cagcatcacc tgtttctata aaatagagaa
     1621 tgttgtttgt tgaggcggtg ccttttttca ggcagttgag gtcttctgct tttgcgccgg
     1681 tggcggtcag gggataggtt gcattggtgt aaaataaggc tgtagcatta gctgtgtttt
     1741 ggctaaacac tgctgtgagc gcaagcagcg ccattgttgt aataaatttt ttcattggaa
     1801 atactccttt ttattctcca taaactgttg ttcgtgtcgt ttttgcgtag attggaataa
     1861 acagcagggg gatgtatacc ttgctgacgg ttgtgtctac gtagtgtatt tgggttatgt
     1921 tggcttgctt ggcggcttta tctatgccag aatcgccaat ttctacaaga ccaaagaaat
     1981 tagtttttgc agcgtaacct gttttaagtt tttgcaggtt ttgttctttc gggaggttta
     2041 ctgcatttgc agtggattgt ggaaaggtgc tgccagagaa aattgcacct ttatcgtaat
     2101 aagcggaagt attaatgcct attgcgtgtg cgctttgggc aagaacatta acaataaaga
     2161 tagataaaat aagttttttc aatatgtttc tccattactt taaacattag tttcattctc
     2221 aaaataaatg gaaaaaaaat aaagtctgac ctttaaccat acatcgtaag tctatataca
     2281 gaatacagaa gccaatatta tatttttgca aagactgcta ttggaattaa aggatgacag
     2341 ttgacaggaa attaatgaga aatggtaatg gctgggtact tagtattaac tctacaatac
     2401 taggtttttt agatgttaat cctgaaactg atatgattcg ttacacaatg gaaaacgaaa
     2461 agttaataat tactaaaagt gataaaaaaa taaaagttaa tgaatcaaaa ttctaaaata
     2521 attcttataa attaaccgtt tattaaactc aaaacaacat ttctttttac gttacccacc
     2581 tgagaaagca gcgatacact tacattttgg agaatctggt ttcttacaag atttgccgat
     2641 tcctgcgcaa aatcagcatc cattattgtt gatcgggctt ctgtcagatt aatttcgagg
     2701 tttgtatttc ttgatattgc agcctcaagc acattatgcg ctgcaccaat tgatgctcta
     2761 atgttcaata cactgttcat tgcccaatct gtttttatca gcatttgctg cataggtgta
     2821 ttggacaaat tatatcctct gggcgaaata ttagcattta cacaatcaag agtattgcca
     2881 ttggtattaa aaacctgtgt ctgcttaaaa gatgtattat taacaagtga ataaacagaa
     2941 tcacctattt ttatatattt tgtttcgtct ggttgtagtt caatttcata ttgcgatgca
     3001 gaggagttta tccccgtaga ttcctgtttt gatgttattg acgcagaaga acctgcaacc
     3061 tgaacaatat tgttgccgtt aattctaaaa agtgcagtgc ttccgtcatt attggttatt
     3121 tcataaaagc ggccgttaat gtttatattt ttttgtgttt ctgttgaaaa atcaaggtaa
     3181 aaataatcat tacctatccc cgtagaacgc accatatcac tgtattcatc aatgacaacc
     3241 ccgtcccctg atgtgataga aactccgtta gttttttcat aaataacaga ttgtttatca
     3301 gcagagttat ttgtaacttt gtaaactctt tggaccccat taattgtgaa catcatgtat
     3361 tgtgtttcac cggggtttat aacagaagaa aaattattgc cgttaaggct gctaaataca
     3421 gctgtagaca ttttgtttac agaaacaccc ggagcattga caggcaccag catgcctgtt
     3481 tgtgcatcta tatcaaacac tatatcctgt gctgaaccgt tgttggtaat ctcaaatata
     3541 tcatcaccat tttttacata tgcagtaccg gcaaaatttt gtaaaaattg tttatcatcc
     3601 ggttgctgtg ctacagaagc agaaaaatct gcaatatatg acccaattac aggagttggc
     3661 tgtggtacga tggaaggatc gacaaactct tctattgttt ttaaagaagc atcataggta
     3721 aaagttttgg tgaaatcaga agcagtatcg tttttgacag tgtaaatctc attatttata
     3781 gaaataaatt ttgtttgtcc tgcttccaca gtgatatcaa attggctgga cgcatttaat
     3841 gaagcttgct cataatcgat aatatcagtc acagaaacct ttgcaccaac aaatttatca
     3901 aaccctgagt tcgatttatc aaaataaata acaccgtctt cttgtgcagt aatctttgtg
     3961 ataccgcttc catcctcatt tttcagataa tattcactgc ccgcagtgac cgtcattgat
     4021 tgcagatttg cataatcagt aaatgaggcc agcacatctg ttgccagttg tgttctgaca
     4081 atatttccgt ttgagtcttt gatattattg tttgaatcca gaatgaaatt ttgttttgag
     4141 gctgcattat ttgttatttg ataaatttta ccgccaaatt cataatactt tgtttcatta
     4201 ggattaagct ctatgtaaga agcaacacct gttgttacac ctgttttcat atttcccaca
     4261 aggttaacgg taactccgtc atctccggca atagggttta ggtttccgtt tttgttgtta
     4321 aatataaagg tctggttttt tgtagaggtt atttcataaa gcttattgtt aaaaatataa
     4381 tgttgtgtgc tgccggcttt tagctctaaa gcctgaccgc tatttataga ggtataggtg
     4441 cttaaatcat aaagaaagtt cttttgaaca ccatccccgc tcacaatatc caatgctcca
     4501 gcattatcag ttttaaaaac caccacttga gagactgcag aggtgttttt taattcatac
     4561 actttattat ttgacttaat ataatagctt ttatttgcct ccatttgcag gtattgttcg
     4621 ccattgccca aagatgtata agagttgtca tagctgccca gctcaacagc ttttactcct
     4681 gtacaatcca caaattctat tttgccagca ctatagttgt atgtaacttg ttggtccttg
     4741 gcagatgtta tggcgaacaa ctttccgtca aagtcagcat agtaggtttc tccggctttt
     4801 gcatccacaa aataaagatt tttttgtccg gtaaaaacat ctaccaaatc gggcttttta
     4861 aacaattcat ccaaagtcag cccgctaaga cccgaggttg tatcataaag aggaatgcgc
     4921 atatcctgta tagaaccgtc aaacagtttt cttccgttaa attcagcttt attgacggtt
     4981 tgcacaatat gcgcaatctg ctgctgaatc tctgcatcca ttgcagcttg tgctttatca
     5041 tcataaatgc cgttcatctg ctgcagtgtg agatttctaa tccttaaaag agaattgttt
     5101 atatcaataa gagcgccttc tgcattggaa agcatatcga tggccattga agaacctttt
     5161 ttaagatccc tggcgctatt aatttgagtt ttgagatgtt cggcaatatt tatgttagcc
     5221 gcatcgtctt tggccctgtt aattttataa cccgtggcca ttcgttccaa tgaggtattt
     5281 atattgcttg ttgccgtatt aagattacgt cttacaagca gacttaagct gtctgaattt
     5341 actgatatca tccttgattt tgttaacgat acaatctctc atctacaatt atgaggcatt
     5401 tacaggcaaa attcctttat acttatggaa gaaaaaaata aaccaaaagt ataaataata
     5461 aaatttatta aaatcaaaaa tcnnaaaaaa ctaatgttta atacgcacaa ccgcctctat
     5521 attgcagtca atgtcgccgt agattacgtt cataaaactg tcatttacag gtataacttt
     5581 tgcataattc agtgattttt ggttgtggtc atcgcctgtt tctattgcag caatttttgc
     5641 taccagcgac gagccttgat aaaaattcaa aaaatagccg ttttcttttt tggccgaaag
     5701 tattctgtaa tatccgggcg gaatttcctt gtggtctgcg gtaatcaaag ttacaggaat
     5761 cataacagtg gggtagtctt cgtatgtaac tttaaaagag tttgaatccg caggcgtagc
     5821 gccttcttgc atttgagggc ctattggagc gcctttggg
//
LOCUS       DABS01000049           10440 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_11023, whole genome shotgun sequence.
ACCESSION   DABS01000049 DABS01000000
VERSION     DABS01000049.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10440)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10440)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10440
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            168..1553
                     /gene="gltA"
                     /locus_tag="CPT85_01885"
     CDS             168..1553
                     /gene="gltA"
                     /locus_tag="CPT85_01885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007063944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase (NADPH), homotetrameric"
                     /protein_id="DAB26022.1"
                     /translation="MEKVDRQHPVEQDPKIRRTNFDAVENNFTDEQAALEASRCLHCK
                     NAKCVKGCPVNIQIPEFIAAIKEGNIEKAGDIIRQTSMLPSVCGRVCPQERQCEGNCI
                     LGIKGKPVAIGALERYVGDKTNAKIGKINDCNKKVAIVGSGCAGITAAADLRKAGYDV
                     TVFEALHELGGVLRYGIPPFRLPRTVLDREIEGLKNIGVKFEKNVIVGKSITINQLKE
                     DGFDAIFLCSGAGLPKMMNIPGENLNGVYSANEFLTRVNLMHANEESTPTPLKVGKKV
                     AIIGGGNVAMDAARTAVRVGYKEVYIAYRRTEAELPARLEEIRHAKEEGVIFKFLHAP
                     SEIIGQDGYVKAMKFDLMELGEPDASGRRRPVPTGESVTIELDAVIVALGTGPNPIIQ
                     TSAQKEGLELETNNRGYIIVNEETGETSIPGVYAGGDVAPTGESNAINAMGAGKRAAK
                     AMDEYLKSVCQ"
     gene            complement(1616..2321)
                     /locus_tag="CPT85_01890"
                     /pseudo
     CDS             complement(1616..2321)
                     /locus_tag="CPT85_01890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012635066.1"
                     /note="frameshifted; too many ambiguous residues; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
     assembly_gap    1706..1718
                     /estimated_length=13
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2409..2834)
                     /gene="rplK"
                     /locus_tag="CPT85_01895"
     CDS             complement(2409..2834)
                     /gene="rplK"
                     /locus_tag="CPT85_01895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="DAB26023.1"
                     /translation="MAKKIVGKIKLQIEAGKANPSPPVGPALGQHGVNIMDFCKQFNA
                     KTESQAGYIIPVVIDVYEDRSFSFIVKSPPAAVLIKKAINLPKGSAAPNKTKVGKITV
                     AQLEEIAKIKMDDLNATTVEAAVRMLKGSARAMGVTVEE"
     gene            complement(2914..3555)
                     /locus_tag="CPT85_01900"
     CDS             complement(2914..3555)
                     /locus_tag="CPT85_01900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_431298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="DAB26032.1"
                     /translation="MEVNAEQNDISVFENEKHQIVEEKDAKLKADIQASHSKEPQKKW
                     YIVHTYSGYENKVKVNLEKRIEYMNMGDKIFRVEVPQKTITKVKDGKKQDREEKIFPG
                     YVLVEMIMDDDSWYVVRHTAGVTKFVGTSKKPIPAKDSEIKKIIHRVQTQTTKIELDV
                     KVGDKVRIISGPFADFIGDITEVYPDKSKLRATVSIFGRETPVELEYKQIQKV"
     gene            complement(3623..3844)
                     /gene="secE"
                     /locus_tag="CPT85_01905"
     CDS             complement(3623..3844)
                     /gene="secE"
                     /locus_tag="CPT85_01905"
                     /inference="COORDINATES: protein motif:HMM:TIGR00964"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="DAB26024.1"
                     /translation="MANQTKDKIDVKEAMTAYFKSVKLEWGKITWPGKHQVIVETIYV
                     IVITAVFTIGVLACDTIFNALFKGLGLIH"
     gene            complement(3868..3940)
                     /locus_tag="CPT85_01910"
     tRNA            complement(3868..3940)
                     /locus_tag="CPT85_01910"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(3905..3907),aa:Trp,seq:cca)
     gene            complement(3966..4133)
                     /gene="rpmG"
                     /locus_tag="CPT85_01915"
     CDS             complement(3966..4133)
                     /gene="rpmG"
                     /locus_tag="CPT85_01915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013637777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="DAB26025.1"
                     /translation="MGIKGKVDKMVVLACEECKERNYTTTKNKKTLKERMELKKHCPR
                     CNKHTVHKETK"
     assembly_gap    4246..4276
                     /estimated_length=31
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4290..4697)
                     /locus_tag="CPT85_01920"
     CDS             complement(4290..4697)
                     /locus_tag="CPT85_01920"
                     /inference="COORDINATES: protein motif:HMM:PF00072.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26026.1"
                     /translation="MSKISKKILIAEDSYEWQKFHSALLKQYDKANLDFTITDCAKDA
                     LNLVEKNLETTYDLILTDLQMETDFYPQAAGEWLLQKIKGYVQYAKTPIVIISASYNI
                     GFIARSCGVDYLSKRSLINNPDSYFLMLDEKLL"
     gene            4748..5005
                     /locus_tag="CPT85_01925"
     CDS             4748..5005
                     /locus_tag="CPT85_01925"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26027.1"
                     /translation="MSNKIKMEICDDINEILCKKVKIMGIIEYFKNLINRVEEIDVKS
                     KRMSKEKCYSSNPFAFTQNKTYAWVEKVKDFNKCSRRNRKN"
     gene            complement(5002..6273)
                     /gene="aroA"
                     /locus_tag="CPT85_01930"
     CDS             complement(5002..6273)
                     /gene="aroA"
                     /locus_tag="CPT85_01930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002249558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="DAB26028.1"
                     /translation="MNLTVEKSKGLNGCATIPADKSISHRSAMFAALTGGVLEVKNFS
                     MGADCLSTLSIIKELGCEAEFIAQKHLKINAKNAFKKDRYNLDCGNSGTSMRLFSGIV
                     ASREIEATLFGDESLSKRPMKRVILPLELMGAKIKHQNFKAPLIIQGKELYPIDYKSP
                     IASAQVKSCILLAGLNTYGETKVTEPFVSRDHTERMLKYLGADIISEGNVTKIKKSTL
                     EPKNLSVCGDISSAAFFMVAAAIVPNSDIILKNVGLNQTRTGIIDVLVQMGADIEILD
                     KRLESNEEVGDIRIKTSELKAVTIEGEIIPRLIDELPVIAVLASQAEGKTVVKDAGDL
                     RNKESDRIKCLVTELLKLGVDIEETPDGFIVNGKTRLKGGAVTECYHDHRLAMSLYVA
                     GLVCEQPVLINEFQWVDISFPEFLPLMESLF"
     gene            complement(6275..7621)
                     /locus_tag="CPT85_01935"
     CDS             complement(6275..7621)
                     /locus_tag="CPT85_01935"
                     /inference="COORDINATES: protein motif:HMM:PF00375.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="DAB26029.1"
                     /translation="MKLHMQILIALGLGIKRNGHIFLGLIAGIILGIAMHAYNAGHEP
                     TAVYNILYSVLNFIGQAFIRLIQMVIIPLIFSAIIIGISSIGDNKQLGAFGIKMVVYY
                     SIISIAAVIIGTTLALTIHPGDGVQSFISQKSAVETQQIVSQAIADQKGHLSELFINL
                     IPANPMEALAKGEMIPIIIFIMVFAIALAKVGEINRPVVSFFESIFAATMKVTDGIMY
                     LAAPGIFALTATAISSFGISIFSSISKYFLAILIGFAIQLFIVYPILMKVFSKVPVRL
                     FFAAIAEAMMVGFGTASSSATLPLVIACCEKRGISHKVCSFVLPLGVTLNFDATAMFQ
                     VIAVLFLTQAYGITVEPLQIIQIAVLAIVASSTCAGIPGGGIITIALVLNGLGLTPTQ
                     MVEGFAFLFAVDRIVDMFRTMLNITSDAVVTAVIADNENELNYDMLTSEESYKDII"
     gene            complement(7725..8627)
                     /locus_tag="CPT85_01940"
     CDS             complement(7725..8627)
                     /locus_tag="CPT85_01940"
                     /inference="COORDINATES: protein motif:HMM:PF14489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="DAB26030.1"
                     /translation="MQNKTEKIASTHLGKKSTGSLSYDPSLLVPIPRNENRELYKIDN
                     DNLPFLGVDVWHAYEFSCLTSNGLPVTRVIKLKYNSDSEYLIESKSLKLYLNSFNMSS
                     FGQTIDDCLEICKSIIEKDLSNALKTEVSINFLTDDTKRVQIFDEFENILNFVDTNKL
                     KIEKFKESPQLLELELLSDEKEYYLTFDSLRSNCRVTHQPDFGDIFIYYKSNHHIKED
                     SLVKYLCSFRSEFHFHEECCEMIYKRLYDVLNINKNGDLFVCALYTRRGGIDICPVRW
                     SKDCKNMAVPLIDTAQYARKSIKQ"
     gene            complement(8641..9093)
                     /locus_tag="CPT85_01945"
     CDS             complement(8641..9093)
                     /locus_tag="CPT85_01945"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26031.1"
                     /translation="MDVKTLKALGNEFYSKGVGNDLKAAKETYVTFLNTAKESPSVAK
                     LIFNDSLVASRDMFFKTARHNAAISGSDASIKEAVRKDSNVKDFISVLKSDKDVKALE
                     KTLKESINNLYKRTKSIREQAVLNENGNVSLSALKDKRSKNFLTRFFG"
     gene            complement(9232..10437)
                     /locus_tag="CPT85_01950"
     CDS             complement(9232..10437)
                     /locus_tag="CPT85_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017288025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="DAB26033.1"
                     /translation="MLDEEFFENKDKGEKEEVKEADISSVPKPHEIKAYLDEHIVGQD
                     DAKKVLSVAVYNHYKRIAHNATEKDATGIEIQKSNILLVGPTGSGKTLLAQTLAKMLD
                     VPFAVADATTLTEAGYVGDDVENILLRLYQSAEFDAQKAERGIIYIDEIDKIARKSEN
                     PSITRDVSGEGVQQALLKMIEGTVANVPPQGGRKHPHQEFIQIDTKNILFIVGGAFVG
                     LDKIVERRADEGTSLGFGAKAPATAAEKEIAAQKMLKKLQPEDLLKFGLIPEFIGRVP
                     IYAVLDQLDEATLKMILTEPKNAIIKQYQCLLKMDNVDLKFEPEAIELIAKEAIKRKT
                     GARALRSIVEELMLNIMYEVPSQEGVNEFTVTAEMVKKRDKVAELIKLPQKNSEQNVS
                     SVETQEEIA"
BASE COUNT         3228 a         1998 c         1771 g         3399 t
ORIGIN      
        1 atgagttttt gtactcaaaa agaaaagaat ggaatgatta cagaaaacag gttaccccat
       61 gggagcttaa gaaatattta gacatctgat gttatttaac caaaacacac cgtcttatat
      121 tataatttaa ttgtgagtta tggacacgat attatggaga aaaataaatg gaaaaagtcg
      181 acagacaaca tcctgtggaa caggatccta aaataagaag aacaaacttt gatgctgtgg
      241 aaaataattt tactgatgaa caggccgctt tagaagcatc tagatgcttg cactgcaaaa
      301 atgcaaaatg cgtaaaaggc tgccctgtta atattcaaat tccggaattt attgcagcta
      361 taaaagaagg taatatagaa aaagcaggcg acatcataag acaaacaagc atgctgcctt
      421 ctgtttgcgg acgtgtatgc cctcaggaac gccagtgtga aggaaactgt atactcggca
      481 ttaaaggcaa acctgttgct atcggcgcac tcgaaagata tgtaggcgac aaaaccaatg
      541 caaaaatcgg caagataaac gactgcaaca aaaaagttgc cattgttggt tcaggttgcg
      601 ctggaatcac agctgctgct gatttaagaa aggcaggcta tgatgtaaca gtatttgaag
      661 cgcttcacga gctcggcggt gttttaagat acgggatccc cccattcagg cttcctagaa
      721 cagtgcttga cagagaaatt gaaggactta aaaatattgg tgtaaaattc gaaaaaaatg
      781 ttattgttgg taaatcaata actattaacc agctcaaaga agacggtttt gacgctattt
      841 tcttatgctc aggtgcagga ttgccaaaga tgatgaacat tccgggtgaa aacctcaacg
      901 gtgtttattc tgcaaatgaa tttttaacac gtgtcaactt aatgcatgca aatgaagaat
      961 cgaccccgac accgcttaag gttggaaaaa aagttgcaat tataggcggc ggtaacgttg
     1021 caatggacgc tgcaagaaca gctgtaagag ttggatacaa agaagtatac attgcataca
     1081 gaagaacaga agcagagctt cctgcgcgtc ttgaagaaat cagacacgca aaagaagaag
     1141 gtgttatctt caaattctta cacgcacctt ctgaaataat cggccaggac ggttatgtaa
     1201 aagctatgaa atttgattta atggagcttg gtgaaccaga tgcttctggc agaagacgac
     1261 ctgttcccac tggcgaatct gttactatag agcttgatgc agttattgta gctcttggca
     1321 caggcccgaa tccgattata caaacatctg cccaaaaaga aggattggag ctggaaacaa
     1381 ataatagagg ctacatcata gttaacgaag aaacaggaga aacctcaatt cccggagtat
     1441 atgccggcgg agacgttgcc ccgacaggag aatccaatgc aataaatgca atgggtgccg
     1501 gtaaaagagc agcaaaagca atggatgagt atttgaaatc agtctgccaa taacaaaata
     1561 aataaaataa aaaagccctc aatttcttga gggctttata gatattagaa tatttttata
     1621 cgtattcttt aacttctgct gcaaggtttt tagtatcaag tttgatacca ggacccattg
     1681 tagtagttaa ataagctgat ttaacnnnnn nnnnnnnntc ttaaaacagc atctgccaaa
     1741 gttgcatagt ttttcatcaa atcatcataa gagaatttga ttttaccgat aggacagtga
     1801 atcataccct gtttatcagc acggaattca actttaccag ctttagcatc tttaactgct
     1861 ttagcaacgt caagtgtaac agtaccggtt ttagggttag gcatcaagcc tttaggacct
     1921 aaaactttac caagtttacc gagcataccc atgcagtccg gtgttgcaat caatgtgtcg
     1981 aattcaaacc agccgcctgc aattttgtcg ataacttctt cagcacctgc ctcttcagca
     2041 cctgctgctt tagcttcgtc agcttttgta cctttagcaa taacgcaaac tcttacatct
     2101 ttaccaaggc cagccggcaa tacaacagtt gaacgaacga gctggtcagc tctttttaca
     2161 tcaataccga gacgcatgtg gcattcaaca gtttcgtcga attttacagt tgcttctgat
     2221 atttcttgca atttttttaa tgcatcagct gctgatgaag gttgtacaaa accttcaagc
     2281 atttcagcct gtttttgttg tcttttagtt aatttactca tttcttttcc tttctgtggt
     2341 gatatcgggt tctaatccgt tacgggctta taaggtgtgc cccatacggc atccccttcc
     2401 acttgttgtt attcttctac tgtaacaccc attgctcttg ctgaaccttt gagcattctt
     2461 accgcagctt caacagtagt tgcgtttaag tcatccattt tgatttttgc aatttcttct
     2521 aattgagcta cagtaatttt gccgacttta gttttgttag gtgcagctga acctttaggt
     2581 aagttaatag ctttcttaat taacacagca gccggagggc tttttactat gaaagagaag
     2641 cttctgtctt catatacatc aataacaaca ggaataatat aacctgcctg tgattctgtt
     2701 ttagcattga attgcttaca gaaatccatg atgttaacac catgctgacc cagagccgga
     2761 ccaaccggtg gtgacggatt tgctttacct gcttcaattt gaagcttgat ttttcctacg
     2821 atttttttag ccattttatt ctcctttcgt ggtatttgcg gggtttccag cctttaaatt
     2881 actttaacag gcatcccctt ccactgacta gtattatacc ttttgaattt gtttgtattc
     2941 gagctcaaca ggtgtttcac gtccaaagat agaaactgta gctctaagtt tagatttatc
     3001 aggataaact tctgtaatat caccgataaa gtctgcaaac gggccggaaa tgattctgac
     3061 tttgtcacca actttaacat caagctcgat tttagttgtt tgagtttgta ctctgtggat
     3121 aatctttttg atttcagaat ctttagcagg aatcggtttt ttagaagtac cgacaaattt
     3181 tgtaacacct gctgtatgtc tgacaacata ccagctgtca tcatccatta tcatttcaac
     3241 aagaacataa ccggggaaga ttttttcttc acggtcttgt tttttgccgt ctttgacttt
     3301 agttattgtt ttttgaggaa cttccacgcg gaagattttg tcacccatgt tcatatattc
     3361 aatacgcttt tcaaggttaa cttttacctt gttttcgtat cctgaataag tgtgaacaat
     3421 gtaccacttt ttttgtggtt ctttgctgtg agaagcctga atatccgctt ttaatttagc
     3481 gtctttttct tcaacgatct ggtgtttttc gttttcaaaa acactgatat cattttgttc
     3541 agcatttact tccatttgtt cttcattttt ttctgtcatt atattaattc ctgtaattga
     3601 ataataaatc ttttttgtga acctaatgaa tcaaaccgag tcctttaaat aatgcattga
     3661 aaatagtatc acatgcaagc acgcctattg taaaaacagc ggtaataact attacataaa
     3721 ttgtttcgac aataacctga tgtttaccgg gccatgtgat ttttccccat tcaagcttta
     3781 cagatttaaa gtaagcagtc attgcttctt taacatcaat tttatcttta gtctggttag
     3841 ccattatatt cctcttttta tttaaatcgc gccctgaagg actcgaaccc tcgacatccg
     3901 gttttggaga ccgacgttct accaactgaa ctaaggacgc tctttaaata ttgaattttc
     3961 aaatgttact tagtttcttt gtgaactgtg tgtttattgc atctggggca atgtttttta
     4021 agttccattc tttcttttaa agtttttttg ttttttgtag tagtgtagtt tctttctttg
     4081 cattcttcac aagcgagaac taccatttta tctacttttc ctttgattcc cattgtttac
     4141 cttcttatct agctttactg attatattta ttttttacaa gcataattta tagaatgcgt
     4201 ctttttcccc tcattctatt cctgcctgtt ttttggttgt aataannnnn nnnnnnnnnn
     4261 nnnnnnnnnn nnnnnnattc ttataaatat tataaaagtt tttcatcaag catcaaaaaa
     4321 taagaatcgg gattatttat caaactccgt ttagaaaggt aatcaacacc acaagaacgt
     4381 gcgataaagc caatattata agacgctgaa atgataacta tcggtgtttt agcatattgt
     4441 acgtagccct taattttttg caaaagccac tctccggcag cctgcgggta gaaatccgtt
     4501 tccatttgaa gatctgttaa aatcaggtca taagttgttt caagattttt ttcaacaagg
     4561 ttcagtgcat cttttgcaca atctgttatt gtaaaatcaa ggtttgcttt gtcatactgt
     4621 tttaatagtg cagagtggaa tttttgccat tcatagctgt cttctgcaat taaaatcttt
     4681 tttgaaattt tactcatgcg tatattatac aaaagataag cacttcgggt aagtcaaatc
     4741 actacttttg agtaataaaa tcaaaatgga aatctgcgat gatatcaatg aaatactatg
     4801 taaaaaagta aaaattatgg gaataattga atattttaaa aatttaataa acagagtgga
     4861 agaaatagac gtaaaatcca aaagaatgtc taaagaaaag tgctactcat ccaatccctt
     4921 tgcttttaca cagaacaaga catacgcatg ggtagaaaaa gttaaagatt ttaacaaatg
     4981 ctctagacgc aacagaaaaa actaaaataa tgattccata agcggtaaaa actctgggaa
     5041 tgaaatatct acccattgga attcgttaat caaaacaggc tgctcacaaa ctagccctgc
     5101 aacatacaaa ctcattgcca gcctatggtc atggtaacac tctgtgacag caccgccttt
     5161 aaggcgtgtt ttaccgttta caataaatcc gtcaggcgtt tcttcgatat ctacgccaag
     5221 ttttaacaat tcagttacaa ggcatttaat tctgtcagat tctttatttc tcaaatcccc
     5281 agcatcttta acaaccgttt taccctctgc ctgcgaagcc aaaactgcaa taacaggtaa
     5341 ctcatctatt aatcttggta taatttcgcc ttcaattgtt acagctttta attcagaagt
     5401 ttttattctg atatccccaa cctcttcatt agattcaagg cgtttatcca aaatttcaat
     5461 atcagctccc atttggacaa gaacatctat aatacctgtt cttgtctggt taagcccgac
     5521 attttttaag attatgtcag aatttggaac aattgcagct gcaaccataa aaaacgcagc
     5581 agacgaaata tcaccacaca cagaaagatt tttcggttca agtgtggatt tttttatttt
     5641 tgtaacattt ccttcggaaa taatatcagc acccagatac ttaagcattc tttcggtatg
     5701 atcacgagaa acaaaaggct cagtaacctt ggtttctcca taagtattta gcccggcgag
     5761 aagaatacac gacttgacct gcgctgacgc aataggcgac ttataatcta tcggatatag
     5821 ttcttttcct tgtataataa gaggagcttt aaaattttgg tgtttgattt ttgcccccat
     5881 tagctctaac gggagaataa cccttttcat cggtcgtttg ctcaagctct catcgccaaa
     5941 gagtgttgcc tcaatttctc tggaagcaac aatcccggaa aaaagtctca tcgatgtacc
     6001 tgagtttccg caatccagat tgtatctgtc ttttttaaaa gcattttttg catttatttt
     6061 aagatgcttt tgtgcaataa attctgcttc acatcctagt tctttaataa tgctcaatgt
     6121 gctcaaacaa tcagcaccca ttgaaaaatt cttaacctca agcacaccac ctgtcaatgc
     6181 agcaaacatt gcgcttctgt ggctgattga tttatctgcg ggtattgttg cgcacccgtt
     6241 gagtcctttt gatttttcta cagttaaatt catactaaat tatatcttta taagactctt
     6301 cactcgtgag catatcgtag tttagctcat tttcgttatc agcaataaca gctgtaacaa
     6361 cagcatcaga tgtaatgttg agcatagttc tgaacatatc tacaattctg tccactgcaa
     6421 acaggaaagc aaaaccttct accatctgtg taggagttag tcccagaccg ttaagaacaa
     6481 gagcaatagt aattatacca ccgcccggta taccagcgca tgtgcttgat gcaacaattg
     6541 caagtacagc aatttgtata atttgtaaag gttcaacggt aataccgtat gcctgtgtta
     6601 agaacaacac ggcaataacc tgaaacattg cagttgcatc aaaatttaac gtaacgccaa
     6661 gaggcagaac aaagctgcat actttgtgag aaatacctct tttttcacaa catgcaatga
     6721 caagaggtaa agtagctgaa ctgctggcag taccaaaacc taccatcata gcttctgcaa
     6781 ttgcagcaaa gaaaagtctt accggcactt ttgaaaatac tttcatcaat atagggtaga
     6841 caataaagag ctgtattgca aaaccaatca gtattgcaag gaaatatttt gatatactcg
     6901 aaaatataga aataccgaaa gaagaaattg cagttgcagt aagagcaaaa atacctggcg
     6961 ctgcaagata catgataccg tcagtaactt tcattgttgc ggcaaaaatt gactcgaaga
     7021 aagaaacaac aggacggttt atttcaccca ctttagccag agcaatagca aacaccatta
     7081 taaaaataat aataggaatc atctcgccct tagcaagcgc ttccattgga tttgcaggaa
     7141 tcaagttaat aaacaattct gacaaatggc ccttttggtc ggcaattgcc tggctcacaa
     7201 tttgttgtgt ttctactgca gatttttggc taataaaaga ttgaacacca tcaccgggat
     7261 gaatagttaa agcaagtgtt gtaccaatta ttacggcagc aattgatata atcgagtaat
     7321 atacaaccat ttttatacca aaagcaccga gctgtttgtt atcaccaata cttgaaatac
     7381 caataataat ggcactaaaa atcaaaggta taataaccat ttgaattaat ctgataaaag
     7441 cttgtccgat aaaattcaaa acactataca aaatattgta aacagcggta ggctcatgcc
     7501 ccgcattgta ggcatgcatt gcaataccca aaattatacc ggcaattaag ccaagaaaaa
     7561 tatgtccgtt tcttttaatt ccaagaccca aagcaatcaa tatctgcatg tgtaatttca
     7621 tatcatatcc tctcttacat cagattatat ttcagacaag tatagttatt ttactatttt
     7681 ttataagcat tgacaagaat ttatataaag gagattattt aaaactattg ctttatactt
     7741 tttcttgcat attgagcagt atcaattaaa ggaacagcca tatttttgca gtctttgctc
     7801 catctgacag ggcaaatatc aataccgccc cttcttgtat acaaagcgca aacaaacaaa
     7861 tcaccgtttt tattaatatt taaaacatca tacagtcttt tataaatcat ctcacagcac
     7921 tcttcatgaa aatgaaattc agaacgaaaa gaacaaagat attttacaag gctgtcttct
     7981 tttatatggt gatttgattt gtaatatatg aatatatcgc caaagtcagg ctgatgcgta
     8041 accctgcaat ttgaacgaag cgagtcaaat gttaaataat attccttttc atctgataaa
     8101 agctcaagct ccagcagttg cggggattct ttaaattttt caattttcaa tttgtttgta
     8161 tcaacaaaat ttaaaatatt ttcaaattcg tcaaaaattt gaacacgctt agtatcatca
     8221 gttaaaaaat taatacttac ttcggttttt agggcgttgc ttaggtcttt ttcaatgata
     8281 cttttacaaa tttccagaca atcatctatc gtttgtccaa aagaagacat gttaaaagaa
     8341 ttcaaatata actttaaaga ctttgattct atcagatatt cactatcact gttgtatttg
     8401 agttttataa ctcttgtaac aggcaggccg tttgatgtca ggcaagaaaa ttcgtaagca
     8461 tgccaaacgt ccactccaag aaaaggtaaa ttatcgttat cgattttata cagttctctg
     8521 ttttcatttc ttggaatcgg cactagtaat gaggggtcat aggataaact tcctgtagat
     8581 tttttgccaa gatgagttga tgctattttt tctgttttat tttgcataac aaatctctat
     8641 ttatccaaaa aatcttgtta aaaagttttt tgaacgttta tcttttagtg cacttaatga
     8701 aacattgccg ttttcattta gtacggcttg ctctcttata gatttagttc ttttatacaa
     8761 attatttata gactctttaa gcgttttttc aagtgcttta acatctttat cacttttcag
     8821 cacagagata aaatctttaa cattactgtc ttttctaaca gcttctttaa tagaagcatc
     8881 tgaaccacta attgcagcgt tatgtcgtgc agttttaaaa aacatatcac ggcttgcaac
     8941 aagagagtca ttaaaaatca attttgctac agaaggagat tcttttgctg tatttagaaa
     9001 agtaacataa gtttcttttg cagcttttaa atcatttcca acaccttttg agtagaattc
     9061 attgccaaga gctttaagag ttttgacatc cataattatt tcccttccaa attataataa
     9121 tattgtaaat ctcataataa tattttttgc cggtattggg aaggtaactt aaaagaatgt
     9181 aacaaaagac cccttcgtat ttgaagaggt ctttttattt tgatgtaaaa attaagctat
     9241 ttcttcctga gtttctactg atgaaacatt ctgttcagaa tttttttgag gaagtttgat
     9301 taactctgca accttgtcgc gttttttaac catttcagcc gtaacagtaa actcgtttac
     9361 cccttcttga gaaggcactt catacataat attaagcata agttcttcca caatcgaacg
     9421 caaagcacga gcacctgtct tacgtttgat agcctctttg gcaatgagct caatagcttc
     9481 gggttcaaat ttaaggtcaa cattatccat tttaagaaga cattgatact gtttgatgat
     9541 agcgttttta ggttcagtca aaatcatttt caatgtagct tcgtcaagct gatctaaaac
     9601 agcatagata ggaacacgac cgataaattc cggaatcaag ccgaatttaa gaaggtcttc
     9661 aggctgcaat tttttgagca ttttttgagc tgcaatttct ttttctgcag ctgttgcagg
     9721 agcctttgca ccaaaaccta gtgatgtacc ttcgtcagct cttctttcaa caattttatc
     9781 caacccaaca aaagcaccgc caacaatgaa cagaatattt tttgtatcga tttgaataaa
     9841 ttcctgatgt ggatgttttc ttccgccctg tggaggaaca tttgcaacag taccttcaat
     9901 cattttcaaa agtgcctgct gtacaccttc acctgaaacg tctcttgtta tgctggggtt
     9961 ttcagactta cgggcaattt tatcgatttc atcgatatag ataatgcctc tttctgcttt
    10021 ttgagcgtcg aattcagcac tctgataaag acgaagaagg atgttttcaa catcatcacc
    10081 aacataacct gcctctgtca gggttgtagc atctgcaacc gcaaaaggaa catcaagcat
    10141 ctttgcaagg gtttgagcaa gcaatgtttt acctgaaccg gttggaccta ccagtaaaat
    10201 attacttttt tgaatttcaa tgcctgttgc atctttttct gtagcattat gcgcaattct
    10261 tttgtaatgg ttgtaaacag caacagacaa cactttttta gcgtcatcct ggccgacaat
    10321 atgctcgtca agataggctt taatttcatg aggtttcggc acagaggaaa tatctgcctc
    10381 ttttacctct tctttttcac ctttatcttt attttcaaag aattcttcgt ctaatatttc
//
LOCUS       DABS01000050            4586 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_19219, whole genome shotgun sequence.
ACCESSION   DABS01000050 DABS01000000
VERSION     DABS01000050.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4586)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4586)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4586
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..452)
                     /locus_tag="CPT85_01955"
     CDS             complement(<1..452)
                     /locus_tag="CPT85_01955"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26015.1"
                     /translation="MNNSKHSFKGYNNEIYAKTKKYQKIYGFEIGTGAHDAWNNEADA
                     FKHTFMQADLALKTTVGLSKFAGDIHEWQGEKNHQPAGEKNMDLWNNEIGREISKEIR
                     KEYNRIEVIKHINSGKMDDIIADKVMTRMRKGELITHPTDPRKYKTPS"
     gene            491..790
                     /locus_tag="CPT85_01960"
     CDS             491..790
                     /locus_tag="CPT85_01960"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26016.1"
                     /translation="MKKFKQYFSLNFLSLSGYFLIIFSSLIIFYFYPQAIEESLKDGP
                     TDNFEITINLFLWLMDVIKCFLAFEAIFFVLTFIESKIXXXKFFMTKFLIKYLTK"
     assembly_gap    737..745
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1185..2396)
                     /locus_tag="CPT85_01965"
     CDS             complement(1185..2396)
                     /locus_tag="CPT85_01965"
                     /inference="COORDINATES: protein motif:HMM:PF03486.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26017.1"
                     /translation="MAEICITGGGPAGVMAAIFAAQNPENKVYIYDKGIILNTLLPTG
                     GGRCNLAFGEYNFKELAKFYPRGEKFLYSVFSRFSTADTLEFFEKIGVKTYTQEDLRI
                     FPVTDSAKDVKQALLKQLDKKNIKKVFEKVVDIKKENEKFVVKTDKNTREFDSVVVAT
                     GGRGTGQRLAKGLGHNIVELRPALSSLITREKDFAQVSGISVKNVTAQVFFENKKIKT
                     LTGDLLFTHTGVSGPVVYKISSYCTYLDFCHDNPLKIEFNLSGTKSFEDFDARFLNAL
                     KSNAQKETLNVLSDFVPKNLALAILNRTNTGTSIKAGQLQAGNRKAVSKCVSALTFNA
                     VSLTRGEEFVTAGGVDLKEIESKTMESKLVKGLYFCGEVIDVDGLTGGFNLQNCWSTG
                     FVAGCALRGVV"
     gene            complement(2389..2895)
                     /gene="folK"
                     /locus_tag="CPT85_01970"
     CDS             complement(2389..2895)
                     /gene="folK"
                     /locus_tag="CPT85_01970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013780790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="DAB26018.1"
                     /translation="MAIAYLCLGTNSGDRARLVEQAVNFLNLADGIKIIRTSALYETE
                     PWGVKEQNWFLNIAVEIKTSLSPQDLMVKCLSIEQMLGRNRENETRWGERTIDIDIIF
                     YDNALIDSQLLTLPHPRMHLRAFVLVPLLELVPDFVHPVLNKTISQIYDELEGVEDVC
                     LYGTRSNG"
     gene            3028..3585
                     /gene="efp"
                     /locus_tag="CPT85_01975"
     CDS             3028..3585
                     /gene="efp"
                     /locus_tag="CPT85_01975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011639985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="DAB26019.1"
                     /translation="MISVNDLKTGLTLELDNGLWSVVEFLHVKPGKGAAFVRTKLKNV
                     ETGNVVEKTFRAGEKVAKATLDKREMQYLYKEGSDYIMMDTESYEQLPVTEDHIGDGV
                     KYLKENMNVNILLHDGKSIGLDMPNHVELEVTDTPPAEKGNTAQGGTKPATLETGAVV
                     NVPFFISNGDRIRVDTRTNEYLDRV"
     gene            3659..4117
                     /gene="accB"
                     /locus_tag="CPT85_01980"
     CDS             3659..4117
                     /gene="accB"
                     /locus_tag="CPT85_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009627720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, biotin carboxyl carrier
                     protein"
                     /protein_id="DAB26020.1"
                     /translation="MNFELDYIEKLVKLVSESDLTELTLEKGEEAIVVRKEKTVVQAQ
                     TIMPQAIAAAPAAAPAQSTAPAEEKKEDAPKGKPITSPMVGTFYLASSPGAKPFVEVG
                     ATVSTGQVVCIIEAMKLMNEIESEVSGKVTQICVKDGEAVEYGQVLMYVE"
     gene            4244..>4586
                     /locus_tag="CPT85_01985"
     CDS             4244..>4586
                     /locus_tag="CPT85_01985"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26021.1"
                     /translation="MTLQAINAQALRPAVNFKAQEAEAPVAAIKTADDSSAXKHTTAK
                     VLGGTAALAVLGFGIYKLAKGKGAKDAKKAAQDLFEKRHATVNTQSVKNQHAANVGQD
                     IVKEYQAMQRRL"
     assembly_gap    4354..4355
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1404 a          930 c          794 g         1447 t
ORIGIN      
        1 tgtgatggtg ttttgtattt tctcgggtct gtcggatggg ttataagttc cccttttctc
       61 atgcgtgtca ttactttatc agcaataata tcgtccattt tgcctgaatt tatatgttta
      121 ataacttcaa ttcgattgta ttcctttctt atttctttag aaatctccct tcctatttcg
      181 ttattccaca agtccatatt tttttcacca gctggttgat ggttcttttc accctgccac
      241 tcgtgtatat cacctgcaaa tttacttaga ccaacagttg tttttaatgc taaatctgct
      301 tgcataaatg tatgtttaaa agcatctgct tcattattcc aggcatcgtg agctcctgtt
      361 ccgatttcaa atccgtatat cttttgatat ttttttgttt ttgcgtaaat ttcattgtta
      421 tatcctttaa aactatgctt tgaattgttc atttcattaa ttcctttcta ttttatgcta
      481 aaatttcttt atgaaaaaat ttaagcaata tttttcacta aattttttgt cattgtcagg
      541 ctattttctt atcatatttt cttcattaat aattttttat ttttatcctc aagctataga
      601 agaaagtcta aaagacggac caacagataa ttttgaaatt actattaatc tttttctatg
      661 gcttatggat gtcattaaat gttttttagc atttgaagct atattttttg ttttaacatt
      721 tattgaatct aaaattnnnn nnnnnaagtt ttttatgaca aaatttttaa taaaatacct
      781 gacaaaatga aaaagattca tacaatattg ttttatactg gaatcgtctt tgctttaatt
      841 cctatatgcc tgttaatact ttttatttta aacattattg ttgaatctat ttttctttat
      901 taaacaagtg gcggactgtg acagcgtaaa atcatgtgtt ttctccttaa attttgtatg
      961 acaataacgc caattgaaaa aatcaattag cgattcactt attcttgaag agtaaaaatt
     1021 caatagacaa tgcaaaaatg gcacagctat gctactgctt catgcacaat ttttaatttt
     1081 tggcattact ccttggcaca gctgcatacc atcttatgca gcttatcaag agaggaacaa
     1141 aacctcatat ttagtataac ttatttttca aatttttaaa cctgctaaac aacaccccgc
     1201 aaggcacatc ctgcaacaaa gcctgtagac cagcagtttt gaagattaaa accgcctgtc
     1261 aggccatcaa catcaatcac ttcgccgcaa aaataaagcc cctttacgag ttttgactcc
     1321 atggtttttg actcaatctc ttttaaatcc accccgcccg ctgtgacaaa ctcttcaccg
     1381 cgcgtgagcg acaccgcgtt gaacgtaaga gcactcacac atttggaaac agccttgcgg
     1441 ttacctgctt gcagctggcc ggcttttatt gacgtgcctg tgtttgtcct gttaagtatt
     1501 gcaagcgcaa ggtttttcgg cacaaaatca gagagtacat tcagggtttc tttttgtgca
     1561 ttagatttta aggcattcaa aaacctcgcg tcaaaatcct caaaactctt tgtgcctgac
     1621 agattaaact ctattttgag cggattatca tgacaaaaat ccagatacgt gcagtaagac
     1681 gaaattttgt aaacaacagg gcccgaaaca cctgtgtgcg taaaaagaag gtcgcctgtc
     1741 agagttttta tttttttgtt ttcaaaaaac acctgcgctg taacgttttt cacgctgata
     1801 cccgacacct gtgcaaaatc tttctctctg gtaatcaaag agctcaaagc cggacgtagc
     1861 tctacaatat tgtgccccag cccttttgca agcctctgtc ctgtacctct tccgcccgtt
     1921 gcaacaacca cgctgtcaaa ttcacgggtg tttttgtcgg ttttgaccac aaatttttcg
     1981 ttctcttttt ttatatcaac aactttttca aagacttttt tgatattttt tttgtcgagc
     2041 tgttttaaaa gcgcctgttt cacgtccttt gcactatctg ttacggggaa aattctcaaa
     2101 tcctcctgtg tataggtttt tacgccaatt ttttcgaaaa attccagagt atctgctgta
     2161 gaaaaccttg aaaatacgct gtacaaaaac ttttcaccgc gggggtaaaa ttttgccagc
     2221 tctttaaaat tgtactcgcc aaaagcaagg ttgcatcttc caccgcctgt gggcaaaaga
     2281 gtgtttagta taataccttt gtcatagata tacactttgt tttcggggtt ttgtgcagcg
     2341 aatatcgcag ccatcacgcc tgcgggcccg ccgcctgtta tacaaatttc agccattgct
     2401 cctcgttccg taaaggcaga cgtcttctac gccttccagc tcgtcataaa tctgtgaaat
     2461 agttttattc aaaacagggt gcacaaaatc cggcacaagc tccagcaaag gcaccagcac
     2521 aaaagccctc aaatgcatac gcggatgcgg aagtgtcaga agctgcgaat cgattagcgc
     2581 attgtcataa aatattatgt ctatatcaat cgtgcgctcg ccccatcttg tttcattttc
     2641 tctgtttcgg ccgagcattt gctctatgct caggcatttc accatcaaat cctgcgggct
     2701 tagcgaggtt tttatctcca cagcaatatt caaaaaccag ttttgctcct tgactcccca
     2761 cggttctgtt tcgtaaagcg cggaagttct tattattttt attccatcag caaggttcag
     2821 aaaattcacg gcctgttcca ccagccgcgc tctatcgcct gaatttgtgc ccaaacataa
     2881 ataagctatt gccatgataa aattttataa ccttttttat ggttttacaa ttcaattctg
     2941 tatatttgtt aaaaaataac atcccgaggt ttcgcatgta tacgttttta tgttaagatt
     3001 ttatacatca gaaaatgagg actatctatg atttcagtaa atgatttaaa aacaggatta
     3061 acacttgaat tggacaacgg cctttggtca gttgttgaat ttttacacgt aaaaccaggc
     3121 aaaggcgctg cttttgtaag aacaaaactt aaaaacgtag aaacaggaaa cgttgttgaa
     3181 aaaactttca gagccggcga aaaagttgca aaagcaactc tcgataaacg tgaaatgcaa
     3241 tatttataca aagaaggttc tgattacatc atgatggata cagaatctta tgaacaactc
     3301 cccgtgacag aagaccacat cggagacggc gttaagtatc ttaaagaaaa catgaatgtt
     3361 aacatccttc ttcacgatgg caaaagcatt ggtcttgata tgccaaacca cgtagaactg
     3421 gaagttacag acacacctcc tgccgaaaaa ggcaacactg ctcaaggcgg tacaaaacct
     3481 gctactcttg aaacaggcgc tgttgttaac gtacctttct tcatctcaaa cggtgacaga
     3541 atcagagttg acacaagaac taacgagtat ttagacaggg tatagactcg gtgtcatcct
     3601 gaatttggtt caggatcttt ggcaaagccg gtcgattatt aataaaaagg acaaaacaat
     3661 gaattttgaa ttggattata tcgaaaaatt agtgaaactg gtttctgaaa gtgatttgac
     3721 agagttgaca cttgaaaaag gcgaagaagc tattgttgta agaaaagaaa aaacagttgt
     3781 acaggcacaa acaatcatgc ctcaagcaat tgcagcagca cctgccgcag ctccagctca
     3841 aagcactgcc cctgcagaag aaaagaaaga agacgcacca aaaggcaaac ctatcacatc
     3901 acctatggtc ggcacttttt atcttgcttc atcacccggt gcaaaaccgt ttgttgaagt
     3961 gggagccaca gtttctacag gtcaggttgt ttgcattata gaagccatga aactcatgaa
     4021 cgagatagaa tctgaagttt caggcaaagt tactcaaatt tgcgtaaaag acggcgaagc
     4081 agttgaatac ggtcaagtat taatgtacgt tgagtaacaa attacaccct gcttttacat
     4141 tgtaaattaa tgtaaacaaa ttgcattatt aaagcaacta aaaatattta catgttttat
     4201 catgactaca aaagtaggtt aaaaaaatag aaaaaggtga attatgactt tacaagctat
     4261 caacgctcaa gcattaagac ccgctgtaaa ctttaaagca caagaagcag aagctcctgt
     4321 tgcagcaata aaaacagcag atgattcttc tgcnncaaaa cacactacag caaaagtttt
     4381 aggtggtaca gcagcactcg ccgtgctcgg atttggtatt tacaaattgg ctaaaggcaa
     4441 aggtgctaaa gatgcaaaaa aagcagctca agatttattt gaaaaacgtc acgctacagt
     4501 taacacacaa tctgtaaaaa atcagcatgc tgctaacgta ggacaagata ttgttaaaga
     4561 atatcaagct atgcaaagac gtttag
//
LOCUS       DABS01000051            2747 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_28336, whole genome shotgun sequence.
ACCESSION   DABS01000051 DABS01000000
VERSION     DABS01000051.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..382)
                     /locus_tag="CPT85_01990"
     CDS             complement(<1..382)
                     /locus_tag="CPT85_01990"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26011.1"
                     /translation="MNREDIIVAIHGQDNGVGGRYNVLASFVHALTQGFRQIGVNAMT
                     TQECVENNKTPNLAIAFNASGLPLWQKILNNNIPNIMWACDSVFYQNLELVQQFSSYQ
                     NFILFNSCSDDTKALQHYLPSLVHG"
     gene            complement(475..825)
                     /locus_tag="CPT85_01995"
     CDS             complement(475..825)
                     /locus_tag="CPT85_01995"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26012.1"
                     /translation="MKIRDVDKVCIVDIAGKTVSQSDLIELKRLFKKEASKRRIGINL
                     EKVLNIEHEFLNFLQESSFKQKLSLFNANNEVYLLLFVSKTDRYVNIYLNENDFYEDK
                     HCIVYRRLKLLKSA"
     gene            complement(925..1737)
                     /locus_tag="CPT85_02000"
     CDS             complement(925..1737)
                     /locus_tag="CPT85_02000"
                     /inference="COORDINATES: protein motif:HMM:PF02153.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26013.1"
                     /translation="MKTGIISLGLIGGSLLKVLCAKGIETVAVTRNKDSIEKAKAYTP
                     FVSDDINTLSGCDIIFVCSPMSKTLEILDKLETVVCKDTIVTDVCSLKGFVMQKERQY
                     TFIGSHPMAGTEHSGFDASFEALFEGAKWVITPFESTPSNAVDKLSSLIALTGATTVI
                     TNAKSHDRAAALISHMPMIVAQALVKTVKDEHLAKMLAASGFRDMTRLALSNTQMAAD
                     MAAMNSQNISESIIMLMESVKQLLGDDYSVQIEALKDIRQNMYNDKGQNISN"
     gene            1962..>2747
                     /locus_tag="CPT85_02005"
     CDS             1962..>2747
                     /locus_tag="CPT85_02005"
                     /inference="COORDINATES: protein motif:HMM:PF00512.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB26014.1"
                     /translation="MNLLSWLFNKKSDKNVLSYYPEAVLIVSLSGEILYANENLLKLF
                     KLTSEELFNMELLDMFDGGFNLVSSLSKSDDSAVVRSKLNLEEDLFFEVKANEYDDGE
                     EKIIVTIRDVTHSQKMLNKLLFEHEYLNKLTKNKNTFLTKISGELTSPIHSINGFSQA
                     ILEGLGGEVNEKQEKYLKIINKNSTQLLELVNSVVEYSKLESGLYEYEFKNFDFVNLM
                     TTLFTQYKVKADDKKIILNFNLNSLGRRNIYSDENVLKRILDIL"
BASE COUNT          910 a          487 c          446 g          904 t
ORIGIN      
        1 aaccgtgtac caaagaaggc aaataatgct gcaaagcttt tgtgtcgtca gaacaagagt
       61 taaacaaaat aaaattttga taagagctaa actgttgcac aagctctaag ttttgataaa
      121 aaacagagtc acaagcccac ataatgttag gaatgttgtt gttaagtatc ttttgccaca
      181 aaggaagccc tgacgcattg aatgctattg caagatttgg tgttttgtta ttttcaacac
      241 actcctgtgt tgtcatagca ttaacaccga tttgcctgaa accttgagta agagcatgaa
      301 caaaagaggc aagcacattg tatctgccgc caactccgtt atcctgtccg tgtattgcaa
      361 caataatatc ttctctattc atcattttcc ccaaaatata gtcttattaa tataatccta
      421 taatttgaaa gttttgtcga ataggaaatg tttgttaata tttcggccaa tagtttacgc
      481 acttttaaga agttttaaac gcctgtatac aatacaatgt ttgtcttcat aaaaatcatt
      541 ttcatttaga tagatattta catatctatc cgtcttggaa acaaaaagca gaagataaac
      601 ttcattgttt gcattaaaaa gagacaattt ttgcttaaac gatgattctt gcagaaaatt
      661 caaaaattca tgctctatgt tcaaaacttt ttcaagatta atgccaatgc gccttttaga
      721 cgcttctttc ttgaaaagcc gttttaattc tattaggtct gattgtgata cagttttccc
      781 tgctatatcg acaatacaaa ctttgtcaac atccctgatt ttcatttgcg tccctgactg
      841 tttgtatacg ttgtccctaa catttatatg atatcaggtt gtgagtttaa tttaattgta
      901 aaaaagttgt ttgtacgtat aactttagtt ggatatattt tgtcccttat cgttatacat
      961 gttttgacga atatctttca acgcctctat ctgtacggaa taatcatctc ccagcagttg
     1021 tttgacagac tccataagca taattattga ttcagagata ttttgactgt tcatcgcagc
     1081 catatctgct gccatttgag tatttgaaag agcaagacgc gtcatatctc taaatccgct
     1141 tgcagcaagc attttggcaa gatgttcgtc tttaactgtc tttacaagtg cctgtgcaac
     1201 aatcattggc atatggctta tcaaggcagc agccctgtca tgtgatttag cattagtaat
     1261 aacagttgtc gctccggtta aggcaattaa agaagatagt ttatccacag cattggacgg
     1321 tgtactttca aaaggtgtaa tgacccactt tgcgccctca aaaagtgcct caaaagaagc
     1381 gtcaaaacca ctgtgctctg ttcctgccat agggtgagaa ccgataaaag tatactgtct
     1441 ttccttttgc attacaaagc ccttaaggct gcacacatca gtaacaattg tatctttaca
     1501 aacaactgtt tccagtttat caagtatttc taatgttttg ctcataggtg agcaaacaaa
     1561 tataatgtca cacccgctaa gtgtgttaat atcatccgaa acaaaaggag tgtaggcttt
     1621 tgctttttct atagaatctt tgtttcttgt aaccgcaact gtttcaatac ctttagcaca
     1681 tagcactttt aaaagcgaac cgcctattaa acctaatgaa ataatacctg ttttcataaa
     1741 aaattccttt atttaaaaca attatacact aagtttacaa ttgtttataa atttgcacag
     1801 catgaaaaaa gttgtaataa taaacctatt aatagtctaa ccattccttt cttgacttat
     1861 gcggccttta attcaaaagc cgcattactt tttttaactt ttttcatttt tcgcaatgat
     1921 tatgatacta taagtatatc taaaggggag ttttacacga tatgaatcta ttatcatggt
     1981 tatttaataa aaaatctgac aaaaacgtac tgagctacta tccggaagcg gttttaattg
     2041 tttctctttc gggtgaaata ttatatgcta acgaaaatct tttaaaactt tttaaactca
     2101 caagtgaaga gctttttaac atggagctgc tcgacatgtt tgatggtggg tttaaccttg
     2161 taagcagcct gtcaaaatca gatgactctg ctgttgtgcg ttcaaaatta aatcttgaag
     2221 aagatttgtt ttttgaagta aaagccaatg aatatgatga tggtgaagaa aaaattatag
     2281 taacaataag agacgtgact cacagccaga aaatgctaaa caagctgctg tttgaacatg
     2341 aatacttgaa caaacttaca aaaaacaaaa atacattttt gaccaaaatt tcaggagaat
     2401 tgacttcacc aatccactca ataaacggtt tttctcaggc catacttgaa ggactcggtg
     2461 gagaggtaaa cgaaaaacaa gaaaagtacc tgaaaataat caacaaaaat tccacccagc
     2521 tgcttgaact tgttaacagt gtggttgaat actcaaagct ggaatcagga ctttacgagt
     2581 atgagtttaa gaattttgac tttgtaaacc ttatgacaac actgtttacg caatacaaag
     2641 tcaaagctga tgataaaaaa atcattttaa actttaattt aaacagcctt ggaagaagaa
     2701 atatttattc tgatgaaaac gttcttaaaa gaatacttga tattctc
//
LOCUS       DABS01000052            3483 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_24893, whole genome shotgun sequence.
ACCESSION   DABS01000052 DABS01000000
VERSION     DABS01000052.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3483)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3483)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3483
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..1184
                     /gene="dnaN"
                     /locus_tag="CPT85_02010"
     CDS             <1..1184
                     /gene="dnaN"
                     /locus_tag="CPT85_02010"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="DAB25996.1"
                     /translation="HSEKNLFEKSSGDKMANMEFTIEKESLLTNLKIVEKTTVTRGIQ
                     PVLSNILIDAAQDNYITFAATDLDINIVSKTIASVQTPGKITLPAKKLSEIVSKLSNK
                     PVVFKLNEETNVVNIECGNSKFELIGISAEEFPATISEEELKDKECVEIDLTPFMKSI
                     KYTAFSAANYENRNIISGVYCSISEQVLEMAATDGNRLTRIIEKITNEKNAAITCVIP
                     SKTLQEFSRVASFLKDSQNEKLCMIIEKTRIIFKTSSMIMTSRLLEGEYPPYKQLIPQ
                     SCEKNAVVKRDEMIAALERVAVMVNERTNIVKFMFGENNLFLKADTPDAGLGEDSISA
                     QYTDEELTIAFNYKYVLDSLKIMESEQVKIGLGGSLSATLFRPDSEDDYLCLIMPIQI
                     R"
     gene            1253..1822
                     /locus_tag="CPT85_02015"
                     /pseudo
     CDS             1253..1822
                     /locus_tag="CPT85_02015"
                     /inference="COORDINATES: protein motif:HMM:PF00288.24"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1770..1779
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1819..2163
                     /locus_tag="CPT85_02020"
     CDS             1819..2163
                     /locus_tag="CPT85_02020"
                     /inference="COORDINATES: protein motif:HMM:PF08544.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25997.1"
                     /translation="MKDAIFNLKHVAMLVQAVNTHDEKLMKLALDDRLHQQYREKLIP
                     GLKEIKDALKHEENVMGVVISGAGPSVLVISYGNNLDKIRQTVSDVWLDLNVKSKILT
                     LQVESNGAQIID"
     gene            complement(2290..2760)
                     /locus_tag="CPT85_02025"
     CDS             complement(2290..2760)
                     /locus_tag="CPT85_02025"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25998.1"
                     /translation="MSLLCFYGQRPETXKVIEFIKNPDDLFSQGCTFCDKTAGWSCNK
                     FGFGFHSKNKPKYFKQNDILDTNKVALDKKEIESRVGYLKEKFKKQIKCKDKKLFVIT
                     LDVNSNPEYIHILNNLYSVLNEVSTNFDLLIVIEQNQYHQDXXXCLHKTFRKIF"
     assembly_gap    2323..2331
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2708..3028)
                     /locus_tag="CPT85_02030"
     CDS             complement(2708..3028)
                     /locus_tag="CPT85_02030"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25999.1"
                     /translation="MANDIIFLYIKRSWKMNIFRIEKTDKYYLIYIFKLKLSFSARKN
                     YLKERLCFIEKIKGLFLKDKKYYETIIPLGRNCEFASNAYRYHGIFESSLFLWTAAGD
                     PXSN"
     assembly_gap    2719..2720
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3150..>3483
                     /locus_tag="CPT85_02035"
     CDS             3150..>3483
                     /locus_tag="CPT85_02035"
                     /EC_number="3.6.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006195147.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. The beta chain is a
                     regulatory subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="DAB26000.1"
                     /translation="MTVLAENEGLITQIIGPVIDVEFSNGNLPEIFDALEIYTQDGQK
                     TVAEVQQLLGENKVRSVAMSSTDGLQRGMKVINTKAPISIPVGQATLGRIMNVLGEPV
                     DEMGPVETE"
BASE COUNT         1143 a          623 c          623 g         1073 t
ORIGIN      
        1 tacattcaga aaaaaattta tttgagaaat cgtcaggaga taaaatggct aacatggaat
       61 ttacgataga aaaagaatcg cttcttacaa atttaaaaat tgtggaaaaa acaacagtta
      121 caagaggcat tcagcctgtt ttatcaaata ttttaatcga tgcagcccaa gacaactaca
      181 ttacctttgc tgcaacagac cttgatatca acatcgtttc aaaaacaatt gcgtcagtac
      241 aaactccggg caaaattact cttcctgcca aaaaactctc tgaaatcgta tcaaaattga
      301 gcaacaaacc cgttgttttt aaactcaacg aagaaacaaa cgttgtaaac atcgaatgcg
      361 gcaactcaaa atttgaactc atcggcattt cagcagaaga attccctgca acaatttcag
      421 aagaagaatt gaaagacaaa gaatgcgttg aaatagattt gactccgttt atgaagtcta
      481 tcaaatacac agctttttct gccgccaact acgaaaatag aaacatcata agcggtgttt
      541 actgctctat ttccgagcaa gtactagaaa tggcagcaac tgacggcaac cgtttaacaa
      601 ggattattga aaaaattaca aacgaaaaaa atgcggctat cacttgcgta attccttcaa
      661 aaactttgca agaattctca agagtagcgt ctttcttaaa agattcccaa aacgaaaagc
      721 tctgcatgat tattgaaaaa acaagaatca tctttaaaac aagctcaatg ataatgactt
      781 ccagactttt agaaggcgaa taccctcctt acaaacagct tattccacag tcttgcgaaa
      841 aaaatgcagt tgtaaaaagg gatgaaatga tcgcagctct agaaagagta gccgttatgg
      901 taaacgaaag aacaaacatc gtcaaattta tgtttggtga aaacaacctg ttcttaaaag
      961 cagatacacc ggacgcaggc cttggcgagg attctatctc ggctcaatat acggatgaag
     1021 aactcacaat cgctttcaac tacaaatacg tgctcgattc tttaaaaatc atggaatctg
     1081 aacaggtaaa aatcggactc ggcggaagct tgtctgctac attgttccgt ccggacagcg
     1141 aagatgacta cctttgcttg attatgccta tccagattag atagcaaatg ccaaaataaa
     1201 ttttgcttat gttataatca atcttgtgat tgtttgagaa agattttaaa taatgaaagt
     1261 tagtgtaaaa gtacctgcta ccacagcaaa tttagggccc ggttttgaca gcctcgggct
     1321 ggctcttcct atttataata caattactgt tgaagaaacc attatgccgg gtacgggtat
     1381 cgaaattaat attattgatg aaacaaacga gcaggatatt atatctattc ctactgacga
     1441 aaacaatatt gtctacaaag caatagagct tttgtacaac tctatcggcc agtcaccgag
     1501 cgagcttaaa attacaataa aaactcaaat tcctatagct cgcgggctag gcagctctgc
     1561 ggctgttatt gtaggcggtt tgattgctgc aaacgagctt ctcggccgtc ctgctgatga
     1621 ggcagctttg ctttctattg caacggagat tgaaaaccat cctgataaca ttactcctgc
     1681 tgttgtgggc gggtttgttg tttcttctct tgaagaagac ggcagcgtta tctattcaaa
     1741 aatgaattgg ccgaaagact ggaatataan nnnnnnnnna caagcattgc acgctccgtg
     1801 cttcctgctg aagtgccgat gaaggatgcg atttttaacc tcaaacatgt tgcaatgctt
     1861 gttcaggctg ttaacaccca cgatgaaaag ctcatgaaat tggctcttga tgacaggctg
     1921 catcagcaat acagagaaaa acttataccc ggtttaaaag aaataaaaga tgcactaaaa
     1981 catgaagaaa acgttatggg tgttgtaata agcggtgccg gtccttctgt acttgttatt
     2041 tcttacggaa acaatctcga taaaatcaga cagacagtat ccgatgtttg gttggatttg
     2101 aatgtaaaat caaaaatact tactcttcag gtagaatcaa acggtgcgca gattatagat
     2161 taaatttcgt attatttttc aaattttagc ttttttcttt ttcttttatt aggcttgtgc
     2221 agtggtttaa attcgttgaa aatttttgtc catcctagag catcaagtgg tttgtttgct
     2281 gtttgtacat cagaaaattt ttctaaaagt cttatgtaga cannnnnnnn ngtcctgatg
     2341 atactgattt tgttcaatca caataagcaa atcaaagttt gtagaaactt cattgagtac
     2401 actgtaaagg ttgtttaaaa tatgaatata ttcaggattg ctgttgacat ccagtgttat
     2461 tacaaaaagt tttttgtctt tacatttaat ttgtttttta aatttttctt taagatagcc
     2521 aaccctgctt tctatttctt ttttatcaag agcaacttta tttgtgtcta aaatatcatt
     2581 ttgcttaaag tattttggtt tgtttttgct atggaaacca aaaccaaact tgttgcagct
     2641 ccagcctgct gttttgtcgc aaaaagtgca gccttgagaa aaaagatcgt ccggattttt
     2701 tatgaattca attactttnn gggtctccgg ccgctgtcca taaaaacaga gaagactcaa
     2761 atatcccgtg gtatctgtat gcatttgatg caaattcgca attccttcca agcggtatta
     2821 tcgtttcgta atatttttta tcttttaaaa acagcccttt tattttttca ataaaacata
     2881 atctttcttt taggtagttt tttcttgccg aaaaagataa ctttaattta aaaatataaa
     2941 taagataata tttgtctgtt ttttcaatcc tgaatatgtt cattttccaa cttctcttta
     3001 tgtacaaaaa aattatatca tttgccatgt tttgtacaag ttgttaatgt tattcatcct
     3061 tttgaatcat tgcaaatttt aatatttgta taatgatgat taaaaatgta taataaatgc
     3121 atatctaaat taaaaaaagg tggataaaga tgacagtatt agcagagaat gaagggttaa
     3181 tcacccaaat tatcgggcct gtaatcgacg ttgaattttc aaacggcaac ttacccgaaa
     3241 tttttgacgc gttagaaatt tacacacagg acggacaaaa aaccgttgcc gaggttcaac
     3301 agcttctcgg cgaaaacaag gtgcgctctg ttgcgatgtc ttctacagac ggtttgcaaa
     3361 gaggaatgaa ggttattaat accaaagctc ctatttcaat ccctgttgga caggctactt
     3421 taggcagaat catgaacgtt cttggtgaac ctgttgacga aatggggcct gtagaaacag
     3481 aaa
//
LOCUS       DABS01000053            3107 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_19710, whole genome shotgun sequence.
ACCESSION   DABS01000053 DABS01000000
VERSION     DABS01000053.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3107)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3107)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3107
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            134..322
                     /locus_tag="CPT85_02040"
     CDS             134..322
                     /locus_tag="CPT85_02040"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25987.1"
                     /translation="MINPIAFSNVGKVNCKAVDAKHSNAKQFDLPFAKNLTSQASDSF
                     VKRDAVKGPTCGVDCCAL"
     gene            322..612
                     /locus_tag="CPT85_02045"
     CDS             322..612
                     /locus_tag="CPT85_02045"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25988.1"
                     /translation="MIASKTVYKFANNILKRFETGYDSGTYYLYNVTDDVLWAGNYSC
                     KLLLDLLDGEKNTGELKEEFKNILQIDDINAINHSVDVILQELIQKGMIVEV"
     gene            618..1796
                     /locus_tag="CPT85_02050"
     CDS             618..1796
                     /locus_tag="CPT85_02050"
                     /inference="COORDINATES: protein
                     motif:HMM:PF04055.19,HMM:TIGR04085"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25989.1"
                     /translation="MYTQSEYDKVLDYYFENKKFPTPNRRFFEAVTGSIDQKDFLFST
                     PWTVSWQVVSQCNLRCRHCFFEGNKDLYKSDFDLDSNTLLQLANELNNKFSVVSLSIT
                     GGETMLRKDIFELLKTLKRNNVAISLQTNGTLIDKNKAQLLSDILNVDTDFVQVSLDG
                     SKPEIYDKIRGEKTFDKALNGINLLIEKGIKVNVNATALSLNVSDLPDLYTLCNNLGV
                     KKFSVSRFVPCYKEQEYLACEFSSVLPSISAIIDKSLISKTFFEMNYRFYDFVSDETL
                     RAYADEYLKKTDKKRTLCNDISCHRHNTIYINAKGEFYLCFACENEKGCLGTFPKDSL
                     EQIWENRKHNIFFKPREAKASECKKCKYFPFCTGGCMGSAFGTYGNVNAPDGLCVYAK
                     "
     assembly_gap    1897..1904
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1947..2960
                     /locus_tag="CPT85_02055"
                     /pseudo
     CDS             1947..2960
                     /locus_tag="CPT85_02055"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2890..2899
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1098 a          453 c          587 g          951 t
ORIGIN      
        1 tgaaaacttt gccggctgat gtgtaaatcg ggcggctttt tctttgtctt attgacaaca
       61 gcgtacaaaa tgctaaaatt gtcataataa agaataaaca tgtggtttaa ctttattttt
      121 aaggaggtta gtgatgatta atcctattgc attttcaaat gtcggtaaag ttaactgtaa
      181 ggcagtagat gcaaaacatt ctaatgcaaa acaatttgat ttaccgtttg ctaaaaattt
      241 aacttcacag gcttcagaca gctttgttaa aagagacgca gtaaaaggcc ctacctgtgg
      301 tgttgattgc tgcgcattat aatgattgca agtaaaactg tttacaaatt tgccaacaat
      361 atactaaaac gctttgaaac aggttatgac agcggaacat attatttata caatgtcact
      421 gacgatgttt tatgggcggg aaattattca tgtaaattgt tgttggattt gttagacggt
      481 gaaaaaaaca caggcgaatt aaaagaagaa tttaaaaata ttctgcaaat agatgacatc
      541 aatgctatca atcatagtgt tgatgtcatt ttgcaagaac ttattcaaaa gggtatgatt
      601 gttgaggtat aagacttttg tatacacaaa gtgagtatga taaggtttta gattattatt
      661 ttgagaataa aaaatttccc acaccaaaca gaagattttt tgaagctgta actggctcta
      721 ttgaccaaaa agattttttg ttttctaccc cctggacagt atcctggcag gttgtttcgc
      781 agtgtaattt gaggtgcaga cactgttttt ttgaagggaa caaagacttg tataagtctg
      841 attttgacct tgattccaat acattattgc agttagctaa tgaattaaat aataaattca
      901 gtgtggtgtc tttgagtatt acaggcggag agaccatgtt gagaaaagat atttttgagc
      961 ttttgaaaac actaaaacga aataacgttg caatatctct tcagacaaac ggtactttga
     1021 ttgataaaaa taaggcacaa ttgctttcag atattcttaa cgttgataca gactttgttc
     1081 aggtaagtct tgacggctca aaacctgaaa tttatgacaa aataaggggc gaaaaaactt
     1141 ttgataaagc attaaacgga ataaatctgc ttattgaaaa aggtataaaa gtcaatgtta
     1201 atgctactgc gttgagtctt aatgtttctg atttacctga tttgtatacc ctttgcaata
     1261 atcttggtgt aaagaaattt tctgtatcca gatttgtacc ttgttataaa gaacaggagt
     1321 atctggcttg tgagttttct tctgttttgc cttcaatatc ggccataatt gataaatctt
     1381 tgatttcaaa aacctttttt gaaatgaatt acagattcta tgattttgtc tcagatgaaa
     1441 cattgagagc ttatgctgat gaatatttga aaaaaactga taagaaaaga accttgtgca
     1501 atgatatctc ctgccacagg cacaatacga tttatataaa cgcaaaaggc gagttttatc
     1561 tgtgctttgc ttgtgaaaat gagaaggggt gtttggggac ttttccgaaa gattcgcttg
     1621 aacaaatttg ggagaataga aaacataata tttttttcaa accaagagaa gcaaaagctt
     1681 ctgaatgcaa aaagtgcaag tatttccctt tttgcacagg gggctgtatg gggtcggcat
     1741 tcggcacgta tggcaatgta aatgctcctg acggtttatg tgtttatgca aaataaagaa
     1801 aagatagcaa aaattttcta tctgatgttt taaagctgtc aggtatttcc gaaggtaaac
     1861 atggaagcac taaacaacct taaacatata aaaaatnnnn nnnnagctgg gaacaacagc
     1921 aaaaaaatga agaagcctgc attgatgtgc tgaaaaaaat atctccggct tcagagcaag
     1981 agcttaatta tgctaaaaat tacggctcaa ctttgataaa tgcagtaaac ataatggatc
     2041 aggtgagtat caataaatct gaaaacgctc ttgtttcaat aagggctgct ttttcttcag
     2101 cagctttact gtctggtgtt atcggtgctg cattaggatc tgttttttct tattttagca
     2161 agtcttataa aaatgttcca aaaacggctg cttttgttgg atacagcata actacacttt
     2221 tgagcatatg tgtaatagat tttttgaatg cacattatga aaaaatggct acaagaattg
     2281 ccagatttca gacaagaaac aatgagctca aggatgtaaa aaactttatt gtatacagtg
     2341 atgctcaaat tgcacaggca aaacaaaaag ctcaaaagat ggaagatgtt gatgacataa
     2401 cacaggattc ttcttttaaa gaaagcttta atcccataaa gacatttaaa aaatcaattg
     2461 caacagtgaa agatttaaag aaagactatg ctgactataa aaaatggcat aaggcctttg
     2521 ttgaggaaga aaaaaataaa actcaaaatt tcaaaaatat ggatgcaaca caagagcagc
     2581 tcgaagctgc acaaaaagac agggataaaa tcttaaaagt aataaaacgt ctggaaattt
     2641 catcaaacaa ctatgaaatt aatacggatc ttggtattag aacaatatct gttattgcaa
     2701 gtatgtttac aattgcagga ggtttgactc tggggtgggc tttgggcaga ttgtccaaaa
     2761 atgctgcaaa atattctaaa aagacagctt ttcttgatta tatgtccaaa ctgtctgtgc
     2821 cggcaggtat attgagtatg atttttttgg cagggccact tgtcaaaatt gccaaagaat
     2881 ctgcgcgaan nnnnnnnnna aacagagctt ttaaaagacg cttccaattt tattgccttt
     2941 tcggattcac aaaaaaatag tgtaaaagat accgcatcac aagaaccaga gaaaaaatcc
     3001 gcaataaata cagttgcaga ggatttttgc gatattacca aaattaaaaa agattttgaa
     3061 gactataaca aatacaaaaa ttcacaactt aaggaagagt tgaaact
//
LOCUS       DABS01000054            3264 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15400, whole genome shotgun sequence.
ACCESSION   DABS01000054 DABS01000000
VERSION     DABS01000054.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3264)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3264)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..1069)
                     /locus_tag="CPT85_02060"
     CDS             complement(<1..1069)
                     /locus_tag="CPT85_02060"
                     /inference="COORDINATES: protein motif:HMM:PF02415.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25973.1"
                     /translation="MKKNLAKRMVIAALLTTWMACPYTALAQDYEGGTNANGGAKYVN
                     KGEIFDVEENSSFTHNQSTAQNYGGGAIYNDGGTVNIGNGTSFVENYLNQPVIDTTDK
                     DYRSAGGAIASWNGGSVNIGNNVSFINNGLNSNGQAAWASGGAIYVDTDQVNLSQLTI
                     GEGVSFTGNQAGSLGGAIYVGDSNTNITSATFNGNKAGTWGGAIFAGQYFGISGNKIN
                     IDGVTKFLNNEAGSYGGAIVSQYTNLNVGDGTNLVTFDNNKAGIDGGAIHISTDSDPS
                     YSANSTIKNSIFTNNQATTGSGGAIFNPGSMTIENASFGQLVLDDQKNIIGAQSGNIA
                     GQNGGAIHNQDGGSVTFNGENN"
     gene            complement(1233..1889)
                     /locus_tag="CPT85_02065"
     CDS             complement(1233..1889)
                     /locus_tag="CPT85_02065"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25974.1"
                     /translation="MEKLKPRTYTNTTTKTHINASETMTLSSQTEKILESMDAEVKNI
                     VKGCLTDPAKLLTFVEEHGTPVYKIAHADKLLAKINEEEGFITPLKGFKAFYLNFVTG
                     FFAQKKLHLSFKSNEMFVMRDGEINIYYMLHQFHKWYGFKKNLPGYDEMAQDLFKDNL
                     DNMSDSDVKEMSIEEILALKEAIARDAQAAEFVIQLAKESTGAKKALDKMKNDGGASI
                     "
     gene            complement(1983..2549)
                     /locus_tag="CPT85_02070"
     CDS             complement(1983..2549)
                     /locus_tag="CPT85_02070"
                     /inference="COORDINATES: protein motif:HMM:PF02417.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="DAB25975.1"
                     /translation="MNDILILAFEYMKIGAVAIGGGYTVIPFLYYLVDKYKWFEVAQI
                     TQMIAVSNLTPGPIGINMATFVGVKVGGILGAAFVTFAFMVPSFIIVCSLSKFLKKNK
                     ENKLINNIMYGLRPAAVALISVAGLKIMNTTVFNLTKFLKTHNLSDFISLKAFILLMA
                     FCAMGLKLKKNPMILIVAAIVLGLVIKL"
     gene            complement(2542..2754)
                     /locus_tag="CPT85_02075"
                     /pseudo
     CDS             complement(2542..2754)
                     /locus_tag="CPT85_02075"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2714..2749
                     /estimated_length=36
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<2750..3118)
                     /locus_tag="CPT85_02080"
     CDS             complement(<2750..3118)
                     /locus_tag="CPT85_02080"
                     /inference="COORDINATES: protein motif:HMM:PF02417.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="DAB25976.1"
                     /translation="MKKISLIKLFWIFFKIGLVLFGGGYAILPFLRAEMVDKEKICTM
                     EEITNYYALSQCFPGLVAGNVSMFTGYKARGVMGAFAAVFGVCLPAYLAIVIVFSFLS
                     AITGYPVIQNIFEVLDVAVCV"
BASE COUNT         1016 a          662 c          518 g         1032 t
ORIGIN      
        1 tattattttc tccgttaaaa gtaacggaac cgccatcttg gttatgtatg gcaccgccgt
       61 tttgacccgc aatattacca gattgagcac ctataatatt tttttgatca tccaatacca
      121 gctgaccaaa agaagcattt tctattgtca tagagccggg attaaaaata gcaccgcctg
      181 agcctgttgt tgcttgattg tttgtaaaaa ttgaattttt tatagttgaa tttgcactat
      241 aactagggtc ggaatctgta cttatatgta ttgcaccgcc gtcgataccc gctttattgt
      301 tatcaaaagt aacaaggttg gttccatctc caacatttaa atttgtatat tggctaacaa
      361 tggctccgcc atagctgcct gcttcattgt ttaaaaattt agtaacaccg tcaatattga
      421 ttttatttcc ggaaattcca aaatattgcc ctgcaaaaat agcaccgccc catgttcctg
      481 ctttatttcc gttaaaggtt gcagaagtta tatttgtatt ggaatcacca acataaatag
      541 caccgcctaa tgaccctgcc tggtttccgg taaaagaaac gccttcgcct atagtcagct
      601 gagaaagatt gacttgatca gtgtcaacat aaattgcacc gcctgatgcc caggcagcct
      661 gaccattgga gtttaagccg ttatttataa aagaaacatt attgccaatg tttacagaac
      721 cgccattcca agaagcaata gcacctccgg cagaacgata atctttatca gttgtatcta
      781 ttaccggttg gtttaaataa ttttctacaa aagaagtacc gtttccaata ttcacagtac
      841 cgccatcatt atatatagct ccaccgccat agttttgagc agttgattgg ttatgtgtaa
      901 aagaagaatt ttcctcaaca tcaaagattt cacctttgtt tacatattta gcgccaccat
      961 tggcgtttgt tccgccttca taatcttgcg ccaacgcagt ataaggacat gccatccatg
     1021 tggtcaacaa agcggcaata accatgcgtt ttgctaaatt cttcttcatt attttctcct
     1081 aattctagat aataattgat aattccacac aaaatttgcc agacacaaat tttttattat
     1141 ccataatatc atctaaaaaa aaataatgga atagtttaga aagtgtaact attttcggcg
     1201 ttacatttat tcatcacaat tttgtaatac ttttagatac tggctccgcc gtcgtttttc
     1261 attttatcaa gggctttttt cgcgccggtg ctttctttcg cgagctgtat aacaaattct
     1321 gcagcttgag catctcttgc tatcgcttct tttagtgcaa gtatttcttc tatgctcatt
     1381 tctttcacgt cagaatcaga catattatca agattatctt taaacaaatc ctgggccatc
     1441 tcatcataac cgggtaaatt tttcttaaaa ccgtaccact tatgaaactg gtgaagcata
     1501 taataaatat ttatttcacc gtctctcatg acaaacattt cattcgattt aaaagacagg
     1561 tgcagttttt tttgtgcaaa aaatcctgta acaaaattca aataaaacgc tttgaaacct
     1621 tttaacggag taataaaccc ttcttcttca ttaattttag ccagcagttt gtctgcatgt
     1681 gctattttgt aaacaggtgt accgtgttct tcaacaaaag taagaagttt agcagggtct
     1741 gtaagacaac ctttaacaat atttttaact tctgcatcca ttgattcaag aatcttttct
     1801 gtctgcgaag aaagcgtcat tgtctctgat gcattaatgt gcgtttttgt tgttgtattt
     1861 gtataggtgc ggggtttaag cttttccatt gtttgttcaa gcttcttttt ccgacgttct
     1921 agtatgtaat taatgattct ttgaataaat ttgttgctca taataaaaac attaaagcat
     1981 ttttaaagct ttataacaag tccgagcaca atagctgcca caatcaaaat catggggttc
     2041 tttttgagtt ttaatcccat tgcacaaaaa gccattagca aaataaaagc tttgagagat
     2101 ataaaatcag acaaattatg agtttttaaa aattttgtaa gattgaacac ggttgtgttc
     2161 attattttta accctgcaac agatatcaaa gccacagcag ccggcctgag tccgtacata
     2221 atattattaa tcagtttgtt ttctttattt ttcttcaaaa attttgacaa agaacacaca
     2281 ataataaaag acggaaccat aaaagcaaaa gttacaaaag ccgcacctaa gataccgccg
     2341 acttttacac cgacaaatgt tgccatatta attccgatag ggcccggagt aagattggaa
     2401 acagcaatca tctgggttat ttgcgcaacc tcaaaccatt tatatttatc aacaagataa
     2461 tacaaaaacg gaataaccgt gtacccgccg cctattgcaa ctgcaccgat tttcatgtat
     2521 tcaaaagcaa gaatcagaat atcattcatt ttcttcctcc tgcacaggtg ttgagctgca
     2581 gcaagcacac ggtgccttat ctttagggaa tgcaaaatgt ctgaacacac caagcatgcc
     2641 tgcaccaatt acaataagaa acggcgaaac attaaatact gaacaaatca aagccgcaag
     2701 aaaaataaat gttnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnna acacatacgg
     2761 caacatcgag cacttcaaaa atattttgaa taacaggata ccctgttatg gctgacaaaa
     2821 aagaaaacac aataactata gcaagataag ccggaaggca aaccccgaat actgcggcaa
     2881 atgcacccat aacaccgcgt gctttataac ctgtaaacat tgaaacattc cctgcaacaa
     2941 gtcccggaaa acactggctc aatgcatagt aatttgtgat ttcttccatt gtgcagattt
     3001 tttctttatc caccatttcc gcgcgcaaaa acggcaaaat agcgtatcct ccgccaaaca
     3061 aaacaaggcc tattttaaag aatatccaaa ataatttaat cagacttatt tttttcataa
     3121 ttacaatgcg ctgcttatta cctgtgcaac ttcttttgcg gcttcatgac gggataatat
     3181 tgcttttact ttggaaaggt cgtctttcat cgcttgtctg tattcattat cttctaagat
     3241 ttttagcaga gcggttgaga taac
//
LOCUS       DABS01000055            2908 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_18765, whole genome shotgun sequence.
ACCESSION   DABS01000055 DABS01000000
VERSION     DABS01000055.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..997
                     /locus_tag="CPT85_02085"
     CDS             <1..997
                     /locus_tag="CPT85_02085"
                     /inference="COORDINATES: protein motif:HMM:PF01966.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25970.1"
                     /translation="TEGKKEYTVLALEHVKLQGAPSVSNTESSPKASTNSFNTSFGNL
                     FIKEQTFYAPQKDTKTPVQKSSTGNLFGSGVVQETETKPQAQAAQQQKTGGLDVISKY
                     FKNILPTFKEAGDKVNQYNAAVDNALKYIPSPYDLDALANSNPRIKAILAENGLPVKM
                     NYSNLKTIKHTHLATTTEFATAIGKELGLSDAEIKTMEVGAALHDIGKSLVPAEILNK
                     QGRLTPEERKIINLHSGLGYELLKGMNLGTNVAEIARDHHNPNSTNKYAQIVRAADVY
                     SAMREERPYKTAKTHDEAMAVLKDMKISSTILNALDKVYGKPQKEEIIVPLRIPA"
     gene            complement(969..1892)
                     /locus_tag="CPT85_02090"
     CDS             complement(969..1892)
                     /locus_tag="CPT85_02090"
                     /inference="COORDINATES: protein motif:HMM:PF14559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25971.1"
                     /translation="MENLSKINELTDKLDQNPADFKIRRELAIELMEGGYNEEALKQL
                     YYLLKRFPEDSRLHYNAGIVLENLKKFDKAIISYQNALNISPEEPDFLYNLGYAYLQT
                     GEFDKAIPFFKRVLQLEENDANSYFNLGYLYSKKAEHDLSITCLKAAINLNPNDHLAH
                     FYLAYEYDKTGKRELCKQHYEKVIELSPDYSWAFFNLGSIYYEEGENDKAKEFLQKTL
                     DLNPKDDNASVIYSKILAKENRFDEAIMLLKNALLNNPYNGDVNYTLAHYYKETGDQE
                     HYKYHLKEALNNHDSLTVSIKQLKLEYEAVQ"
     gene            complement(1982..2070)
                     /locus_tag="CPT85_02095"
     tRNA            complement(1982..2070)
                     /locus_tag="CPT85_02095"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(2034..2036),aa:Leu,seq:taa)
     gene            2199..2555
                     /locus_tag="CPT85_02100"
     CDS             2199..2555
                     /locus_tag="CPT85_02100"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25972.1"
                     /translation="MDEQNTKQCNGYEAMYTFLNDEDFERHLKECPQCAKEHEKMQKV
                     SDLIQEAKPYIKQKRKNTRVLVSAAAFFVAVFATLSVPLCMVGIDAYDNLVAQNTMDV
                     QELGLPVDEYGFLYIE"
     gene            2648..2908
                     /locus_tag="CPT85_02105"
                     /pseudo
     CDS             2648..2908
                     /locus_tag="CPT85_02105"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     stop; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2691..2711
                     /estimated_length=21
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT          988 a          513 c          524 g          862 t
ORIGIN      
        1 aaccgaagga aaaaaggaat atacagtttt ggcactagag catgttaagc ttcagggtgc
       61 accttctgtc tcaaatacag aatcgtcgcc caaagcaagt acaaatagct ttaatacatc
      121 ttttggcaat ctttttataa aagagcagac tttttatgcc cctcaaaaag ataccaaaac
      181 tcctgtacaa aaatcttcaa caggaaattt gttcggcagc ggtgttgtgc aagaaactga
      241 aaccaagcct caagcccaag ctgcacagca gcaaaaaaca ggcggtttgg atgtaatttc
      301 taaatatttt aaaaatatat tgccgacttt taaagaagcc ggagataagg taaatcaata
      361 taacgcagca gttgataatg ctctgaaata tattccgagc ccgtatgatc ttgatgcgct
      421 tgcaaattca aacccgagaa tcaaagctat tcttgcggaa aacggtttgc ctgtaaagat
      481 gaattacagt aacttaaaaa caattaaaca tacacacctt gccacaacaa cagaatttgc
      541 aactgcaata ggcaaggaac tcggtctgag cgatgcagaa attaagacaa tggaagttgg
      601 agcagctttg catgacatag gcaagtcact tgttcctgct gaaatcttga ataaacaagg
      661 ccgtttgact ccggaagaaa gaaagattat caatcttcac tcaggactcg gttatgagct
      721 gttaaaagga atgaatctag gtacaaatgt tgcagaaatt gcaagagacc atcacaatcc
      781 gaattcaaca aacaaatatg ctcaaatagt cagagctgcc gatgtctact ctgcaatgag
      841 agaagaacgt ccttacaaaa cagcaaaaac tcatgatgaa gctatggctg ttttaaaaga
      901 catgaaaata agctctacta tattaaatgc tcttgataaa gtatacggca agccccaaaa
      961 agaagaaatt attgtaccgc ttcgtattcc agcttaagct gtttaatgct tactgtgagc
     1021 gagtcatgat tgtttaatgc ttcttttaga tggtatttat aatgttcttg atcgcctgtt
     1081 tctttgtagt aatgagccag agtgtagtta acatcaccgt tataagggtt atttaaaagc
     1141 gcatttttta aaagcataat tgcttcgtca aagcggtttt cttttgctaa tatctttgaa
     1201 tatataacag atgcattgtc atcttttgga ttaaggtcta aagttttttg caaaaactct
     1261 tttgctttat cattttcacc ctcttcataa tagattgagc caagattaaa aaatgcccag
     1321 ctgtagtcgg gtgaaagctc tataactttt tcgtaatgct gtttacaaag ctctcttttg
     1381 ccggtcttgt catattcata agcaagataa aaatgtgcaa gatggtcatt ggggtttaaa
     1441 tttattgcag ctttcaagca tgtgattgaa aggtcatgtt ctgctttttt tgaatataaa
     1501 tacccgaggt taaaatagct gtttgcatcg ttttcctcaa gctgcaaaac tcttttaaaa
     1561 aacgggatag ccttgtcaaa ttctcctgtt tgcaagtatg cataacccag attatacaaa
     1621 aagtcaggct cttctgggct gatgttaaga gcattttgat atgagattat tgctttatca
     1681 aactttttca gattttctaa aacaattcct gcattataat gcaggcgaga atcttcagga
     1741 aaccttttta aaaggtaata aagctgcttc aatgcttctt cattgtagcc gccttccata
     1801 agctcgattg ccagttctct tcttattttg aagtcggcag gattttgatc aagtttatca
     1861 gtaagttcat ttattttaga tagattttcc atactgtaat tgtaatgtct ttttagagta
     1921 taagcaaaat gtaaactaaa tgataaatgt aaaaaagacc ctcaaatgag agtctttcaa
     1981 gtggtgccct gagccagact tgaactggca ctgggggtga gcccaatcgg attttaagtc
     2041 cgacgcgtct accgattccg ccaccagggc aatttgtatt attatattcc tgtaaaaacc
     2101 ctatattgtc aagtaagttt ttatagtaca aaaatttttt ttcaaaaaaa tgaacaattt
     2161 tattttttat tcgttatagt gtatgtaagg aaaaaattat ggacgaacaa aacacaaaac
     2221 aatgtaacgg atacgaagcc atgtatacct tcttgaatga cgaagacttt gaacgtcatc
     2281 tcaaagaatg tcctcagtgc gcaaaagagc atgaaaaaat gcaaaaagta tcagacctaa
     2341 tacaggaagc aaaaccatac ataaaacaaa aacgtaaaaa tacgagagtt cttgtcagtg
     2401 ctgctgcttt ttttgttgct gtgtttgcta ctttgagtgt gccactttgt atggtgggta
     2461 ttgatgccta tgacaatctt gttgcccaga atacaatgga cgttcaagaa cttggtttgc
     2521 ccgttgatga atatggattt ctttatatag aataataatt atatggattt aaaaacaata
     2581 ataaataacc acggaacaac cgtgagaagt atcataaaac gtattacaaa cgaacataac
     2641 gaggaccttg aacaggaggt ctatacaaga gtctggaaaa attcagacaa nnnnnnnnnn
     2701 nnnnnnnnnn ntaaggacaa taagcgctaa cctatccaaa gattacctta agtcttcctc
     2761 taaaaaactt gatgacagta caacagcaga tgaaacagct ctgtctcttg tgcgcgattc
     2821 aaaagataca cctgaatctc ttttgctcaa aagagaacgg caaaaaatga tttcaagagc
     2881 aataaacaat ttaaaaccaa aatttaaa
//
LOCUS       DABS01000056            2667 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_14527, whole genome shotgun sequence.
ACCESSION   DABS01000056 DABS01000000
VERSION     DABS01000056.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..379)
                     /locus_tag="CPT85_02110"
     CDS             complement(<1..379)
                     /locus_tag="CPT85_02110"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25966.1"
                     /translation="MKIFPVSLSVYKNQKSNNIKATSPVNMQPNLNAQKDTVSFKALK
                     NMVQMQIDELDKNIKNNIEPFLQDSRELYLGVGKIGLAAQNIKDTFENEANNLFHKQM
                     EIFDIKNNPYVKKYKKYTSRETEF"
     gene            complement(383..1387)
                     /gene="rlmN"
                     /locus_tag="CPT85_02115"
     CDS             complement(383..1387)
                     /gene="rlmN"
                     /locus_tag="CPT85_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008909442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="DAB25967.1"
                     /translation="MSLKQLTEFTDSIEESKYRAKQLHNWIYLKSASTFEQMSDISKK
                     TREKMAEIAEITNVKIKHKQVSVDGTIKYLLEYPDGNCVETVLMRFDNRANLTACVSS
                     QVGCACNCKFCATAKLGFIRNLTPVEIIEQVLTIQRDTGLKVTNIVFMGQGEPLLNLD
                     NVLKAIDIFNKDFVIGIRRLTVSTCGIIPQINKLAALDFQPTLAISLHAPNHALRSEL
                     MPIENKYNLDELMKALKDYVGETGRRITIEYTLIKGFNDTTECAKELAKLLIGLKANI
                     NLIIYNPNDKDTFEKPTKESIQKFKYILEQSGKKVTIRLERGSDIDAACGQLSNKMKD
                     "
     gene            1566..2423
                     /locus_tag="CPT85_02120"
     CDS             1566..2423
                     /locus_tag="CPT85_02120"
                     /inference="COORDINATES: protein motif:HMM:PF00485.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25968.1"
                     /translation="MQLITEHTNNLIETDQASKFPIVIKIVESVKKILEEDKKQKHPL
                     FINVKESVIFNIARRALNEPGSRFLIGIAGESASGKTTFVQNAIRSCIAEERTDLYTI
                     VCCDDYYYDWSNELKEAGSYEAFFAKGYSFDTPKAINLQLMKEHLISLKNGSAVRSPD
                     YNFTTCESFPHGVLKKPAQIIVNEGLYVLNEGIRDIMDIKVYVFTPFEIIKDRWYRRA
                     ESRGKTGLAADMQFENVNTTAQTYIRPAMQCADIVMNGVVSSAYIQEMTEKIFRTMDD
                     IAKGKDVSL"
     gene            complement(2500..>2667)
                     /locus_tag="CPT85_02125"
     CDS             complement(2500..>2667)
                     /locus_tag="CPT85_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_925582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="DAB25969.1"
                     /translation="EVKVGENESIESALKRFKKKIQKAGILSEIKRRETYEKPSIKRK
                     RKSEAARKRRV"
BASE COUNT          835 a          460 c          416 g          956 t
ORIGIN      
        1 taaattcagt ttctcgagac gtgtattttt tatacttttt aacataagga ttatttttta
       61 tatcaaatat ctccatctgt ttgtgaaaaa gattgttagc ttcattttca aacgtatctt
      121 ttatattttg tgcagcaaga ccgatttttc ctacaccaag atataactct ctgctgtctt
      181 gcagaaaagg ctcaatattg tttttaatat ttttatccaa ttcgtcaatt tgcatttgaa
      241 ccatattttt taatgcttta aagcttaccg tatctttttg cgcatttaag ttaggctgca
      301 tattgactgg tgaagttgct tttatattgt ttgatttttg atttttataa acactaagag
      361 aaacaggaaa tatcttcatt ttttagtcct tcattttatt actcagctga ccgcatgccg
      421 catctatgtc agaacctcgt tcaagcctta ttgttacctt tttgcccgat tgctcaagta
      481 tatatttaaa tttttgaata gattcttttg ttggtttttc aaatgtatcc ttgtcattgg
      541 gattgtaaat aataagattt atattagctt taaggccaat caagagtttg gcaagctctt
      601 tggcacactc tgttgtatca ttaaatcctt ttattaaagt atactcaatt gttatccttc
      661 tgcctgtttc tccaacataa tcctttaacg ctttcatcaa ctcgtccaga ttatatttgt
      721 tttctatagg cataagctca ctacgcagtg catggttagg cgcatgcaaa gatatagcaa
      781 gtgttggctg aaaatccaac gcggcaagct tattaatctg aggaataata ccacatgttg
      841 aaacagttaa acgtcttatc cctataacaa agtctttgtt aaatatatct atggctttca
      901 gtacattatc aagatttaat aaaggttcac cctgtcccat aaagacaata ttggtaactt
      961 tgagccctgt gtctctttga attgtcaata cctgctctat tatttcaaca ggagtaagat
     1021 ttcttataaa acctaacttg gctgtagcac aaaacttgca attgcatgca cagcctactt
     1081 gtgaacttac acaggcagtg aggtttgctc tgttatcaaa acgcattaag actgtttcaa
     1141 cacaattccc gtcaggatat tccaaaagat attttatagt cccgtcaacg cttacctgct
     1201 tatgctttat ctttacgttg gttatttccg caatctcagc cattttttca cgagtttttt
     1261 tagatatatc actcatctgt tcaaatgttg aagcagattt caaatatatc caattgtgaa
     1321 gctgttttgc cctgtatttt gattcttcaa tagagtcagt aaattcagtt aactgtttca
     1381 gactcattcc tgacagtatt agtttagaca taattttatt tttgcataaa aatattaaaa
     1441 taattgatac aattccgtaa tatataaaat atttactagc aacattaatt ttttttacat
     1501 tttaaataac aaacaggaaa tttaagttct tttattctaa aatatttata gaatggggcg
     1561 acagcatgca actaataaca gaacacacaa ataatttaat agaaaccgat caggcttcaa
     1621 aatttcctat tgtaatcaag attgttgaaa gcgttaaaaa gattcttgaa gaagataaaa
     1681 agcagaaaca tccgcttttt ataaatgtaa aagagtctgt aattttcaac attgcaagac
     1741 gtgctcttaa tgagcccggc tcacgctttc ttatcggtat tgccggtgaa tcagcttccg
     1801 gcaaaacaac atttgtacaa aatgctatcc gctcttgtat tgcagaagaa agaactgatt
     1861 tatacacaat tgtatgctgt gatgattatt attatgattg gtcaaatgag cttaaagaag
     1921 caggaagcta tgaagcattt tttgctaaag gctacagttt tgatacccca aaagccatta
     1981 atttacaatt gatgaaagaa cacttgattt ctttaaaaaa cggttctgct gtcagaagcc
     2041 ctgactacaa ttttacaacg tgtgaaagtt ttcctcacgg agttttgaaa aaacctgcac
     2101 aaattattgt taatgaaggt ttatacgttc tcaatgaagg tataagagac atcatggaca
     2161 tcaaagtcta tgtgtttacg ccatttgaaa taatcaaaga cagatggtac agacgtgcag
     2221 aatccagagg caaaacaggc cttgctgctg atatgcagtt tgaaaatgtt aacacaacag
     2281 ctcaaacata cattcgccct gcaatgcaat gtgcagatat tgttatgaac ggtgttgttt
     2341 caagtgctta tattcaagaa atgactgaaa agattttcag aacaatggac gacattgcaa
     2401 aaggcaaaga tgtaagttta taaaaaagaa aaatagatac taaaagacct ctttaaatat
     2461 taaagaggtc ttttttaact ttattctaat gcttttcgat taaactctgc gtttacgagc
     2521 agcttcagat ttacgttttc tttttatgct aggtttttcg taagtttcgc gtcttttgat
     2581 ttcagacaaa ataccagctt tttggatttt tttcttaaat ctttttaaag cgctttcaat
     2641 actttcgttt tcgcctactt taacttc
//
LOCUS       DABS01000057            5539 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_21381, whole genome shotgun sequence.
ACCESSION   DABS01000057 DABS01000000
VERSION     DABS01000057.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5539)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5539)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5539
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            48..269
                     /locus_tag="CPT85_02130"
     CDS             48..269
                     /locus_tag="CPT85_02130"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25696.1"
                     /translation="MTGLLRGGDGAGEGIKKKKKKRIKIKKRRKKMDTEKELDALYKQ
                     LGKESREAFNGXXNLYIWYLLGNKRINKL"
     assembly_gap    214..217
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            462..743
                     /locus_tag="CPT85_02135"
     CDS             462..743
                     /locus_tag="CPT85_02135"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25697.1"
                     /translation="MDKFIFEDYLLQAIILLGFFVFLSPFAILELVQKRNKKIDLFTQ
                     CKLKKIGIVAYQNFAAQDPFTAKEKTAQFMREVYKNGNLNQKYDLIRRA"
     gene            743..982
                     /locus_tag="CPT85_02140"
     CDS             743..982
                     /locus_tag="CPT85_02140"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25698.1"
                     /translation="MSVSEQLTENETLLEMLDIAAGAMIENDLCLYCAASGIGDCFFV
                     KDSDICKNKMFEGLKIIAHRNLRDKHNETNRDDSA"
     gene            1072..1374
                     /locus_tag="CPT85_02145"
     CDS             1072..1374
                     /locus_tag="CPT85_02145"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25699.1"
                     /translation="MTNELTTLTDEMIELKDAIARYKFELKQLEKKKEQLDIKLIGVL
                     KENNVNEMNLGHCHFYLKTKQRTAFDQSLFKEEHPTLFEKYYITKESEVFEFKLGA"
     gene            1378..1932
                     /locus_tag="CPT85_02150"
     CDS             1378..1932
                     /locus_tag="CPT85_02150"
                     /inference="COORDINATES: protein motif:HMM:PF04404.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase"
                     /protein_id="DAB25700.1"
                     /translation="MNIYEKLQSARVKLQSKKLKKSGKNKHTGFSYFELADFLPSVNM
                     IFSEIGLCSNFSLCAEKAVLTIYDTESNDNITFETPTASAQLKGCTEVQSLGAVHTYL
                     KRYLYLNALEIVEAETLDPLVGTDEIEEVNNNDDFDIIAGIDTLKNAKEISSYFNEYN
                     TVVKNKSEFIKAINARRKAITEIS"
     gene            1932..2306
                     /locus_tag="CPT85_02155"
     CDS             1932..2306
                     /locus_tag="CPT85_02155"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25701.1"
                     /translation="MSIEDYSTELIKTAKELKELAFEYKKARADYSQALNGLITLIHK
                     ASLAGDKASFDNKIPKLLETQFKDEAAMLIKQFHGSQALYKGLEEVLKAYQAHISGIQ
                     SVIKYNLSGEIAEATKHKYGGN"
     gene            2307..2540
                     /locus_tag="CPT85_02160"
     CDS             2307..2540
                     /locus_tag="CPT85_02160"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25702.1"
                     /translation="MKIGNAWTKTSDDGQTYISVALDEVILEKYPFLKNCFVNLWRIP
                     QEERKNENSPGWAVNLSAKKEKPKEEQAETNLF"
     gene            2582..3079
                     /locus_tag="CPT85_02165"
     CDS             2582..3079
                     /locus_tag="CPT85_02165"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25703.1"
                     /translation="MMQYAPFFYKEKFMAKRFYDSNKYDDSWFRNLAPDLKCVFDYCL
                     CKCDHAGILELDIESVNWHTKGKNTLKEIQENFATKFMFLSDNKIFIPNFLYWQYKNE
                     LNPSNGVHRCVYDLLVLEGIRVEPYLASQVLKTDFEEWVSLCKQLKEKGMKYTDLLKQ
                     RKEEK"
     gene            3093..3356
                     /locus_tag="CPT85_02170"
     CDS             3093..3356
                     /locus_tag="CPT85_02170"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25704.1"
                     /translation="MEIYKPYHLLLLDWVKNHVYFTHKDIVKVTNCNCPYSVLRDFKK
                     IAKVTEESKMKSKKLVDSKGNVVNVTKRYIEYKFEGLKNAVNE"
     gene            3452..3670
                     /locus_tag="CPT85_02175"
     CDS             3452..3670
                     /locus_tag="CPT85_02175"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25705.1"
                     /translation="MNTGQVKDLSAKHLVKILGVTDKTIDMYLCGYGFSHIETVKRGT
                     EKIYKNVTEKDLIALHKLANRKKRRFTN"
     gene            3713..4201
                     /locus_tag="CPT85_02180"
     CDS             3713..4201
                     /locus_tag="CPT85_02180"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25706.1"
                     /translation="MKLQELEQKYEELGKEIEKLKNEKKGKRWKPDCGEEYYYVGLFG
                     HVGELKWENCFEDQYLYSQGNCFKTEQEAKEQSENLKTKAELRALAEELNGDVAVDWN
                     NRIQDKYYLYISRTINELSSSYVEVHQNQGTIYCLDPTFKDKAIERIGKERLIKMINS
                     GV"
     gene            4243..4509
                     /locus_tag="CPT85_02185"
     CDS             4243..4509
                     /locus_tag="CPT85_02185"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25707.1"
                     /translation="MGKDVIIIFLLIVISPFLLIIVNFKIDKRFDKSVGSVFCDDKKI
                     YEGRLYVVDKDLATENLQSPXCLTFLSAILITHFKLKKEHFVRI"
     assembly_gap    4435..4436
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4525..4797
                     /locus_tag="CPT85_02190"
                     /pseudo
     CDS             4525..4797
                     /locus_tag="CPT85_02190"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4730..4993
                     /locus_tag="CPT85_02195"
                     /pseudo
     CDS             4730..4993
                     /locus_tag="CPT85_02195"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    4772..4793
                     /estimated_length=22
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    4979..4980
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5202..5384
                     /locus_tag="CPT85_02200"
     CDS             5202..5384
                     /locus_tag="CPT85_02200"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25708.1"
                     /translation="MKNYEIWLTSSNGDSKSLVKRYPFEIQAVIWCFMNKFINSGSGY
                     YFLDPRVEIKEVNNDN"
BASE COUNT         2081 a          808 c         1129 g         1491 t
ORIGIN      
        1 gcactatagc ttattacgtc caaagcaaca acccttaaca aactaacttg acggggctcc
       61 tccggggcgg cgacggggcg ggggagggga taaagaaaaa gaaaaagaaa aggataaaga
      121 taaagaaaag gagaaagaaa atggatacag aaaaagaact agatgcttta tataaacaat
      181 taggaaagga atcaagagaa gcttttaatg gatnnnntaa tttgtacatt tggtatttgt
      241 tgggcaataa aaggattaac aagctatgat ttgtttgatt attttaaata tgtatatgtc
      301 ctttattgga taatcagcat tactttcaaa cctaaacatt cacaatagaa cttttataca
      361 atgcctgcgc agacagaaag ccaatgtaat ctactcccag tgatacacat ctgtctgtag
      421 cgggtattaa taaaggtttt ataacttaag gagtttaaat aatggataaa tttatttttg
      481 aagattacct tcttcaagca attattttgc ttggtttctt tgtcttttta tctccatttg
      541 caattcttga gcttgtacaa aaaagaaata agaaaattga cttgtttaca caatgcaaat
      601 taaaaaaaat tggaattgtt gcttatcaaa attttgcagc ccaagaccct tttacagcga
      661 aggaaaaaac agcacagttt atgcgtgaag tatacaagaa tggaaatcta aaccaaaaat
      721 acgatttgat aaggagggca taatgagtgt cagtgaacag ttgacagaaa acgaaacttt
      781 attagaaatg ctggatatag cagctggtgc aatgattgaa aatgacctgt gtttatattg
      841 tgcagctagt ggtataggtg attgtttttt tgtaaaagac tctgacatat gcaaaaacaa
      901 aatgtttgaa gggttgaaaa ttattgcaca caggaattta agggataaac acaatgaaac
      961 taacagagat gactccgctt gagttaattc aaattttgcg cgacgcagta gaaacgcgaa
     1021 acggaaagat gattcaggct gtaaaagacg aatacaacag gagaagtaaa tatgacgaat
     1081 gagttaacaa cgcttacaga tgaaatgatt gagctgaaag atgctattgc aagatacaag
     1141 ttcgaattaa agcagcttga aaagaaaaaa gagcagcttg atataaagct tatcggcgtt
     1201 ttaaaagaaa acaatgtcaa tgaaatgaat ctcgggcact gtcattttta tttaaaaaca
     1261 aaacagcgta cagcttttga ccagtcgctt tttaaagaag agcaccctac cttatttgaa
     1321 aaatactaca ttacaaaaga atcagaagta tttgagttta aattaggagc atagacgatg
     1381 aatatttatg aaaaactaca atctgcacga gttaaattgc agagcaaaaa gctaaaaaaa
     1441 agcggtaaaa ataaacacac aggattttct tattttgagc ttgcagattt tttgccttct
     1501 gtcaatatga ttttttcaga gatcggactg tgctctaact ttagcctttg cgcagaaaaa
     1561 gctgtattaa ctatatacga caccgaaagt aacgataata ttacattcga aacaccaaca
     1621 gccagcgcac agcttaaagg ctgtacagaa gtccaatcct tgggggctgt tcacacatat
     1681 cttaaaagat acttgtattt gaatgcgctt gaaatagttg aagctgaaac attagaccct
     1741 cttgtaggta ctgatgaaat tgaagaagta aataataatg atgattttga cattatagcg
     1801 ggcattgaca cattgaaaaa tgcaaaagaa ataagctcct atttcaatga atacaatact
     1861 gttgttaaaa ataaatcaga atttattaaa gcaataaacg cacgcagaaa agcaataacg
     1921 gagattagtt aatgagcata gaggattaca gcacagaatt gattaaaaca gcaaaggaac
     1981 tcaaagagct ggcttttgaa tacaaaaaag ccagagctga ttattcacaa gcactaaacg
     2041 gcttaatcac attgatacac aaagcctcgc ttgcaggcga taaggcttcg tttgataaca
     2101 aaatacccaa attattagaa acacaattta aagatgaggc agcaatgctc ataaaacagt
     2161 ttcatggttc acaggctttg tataaagggc ttgaagaggt tttaaaagct tatcaggcgc
     2221 atatatcagg tattcaatcg gttattaaat acaatctctc gggggagatt gcagaagcta
     2281 ctaaacacaa gtacggagga aattaaatga aaataggtaa cgcttggaca aaaacatcag
     2341 atgacggaca gacttacatt tcagtagcac tggatgaggt cattcttgag aaatatccgt
     2401 ttttaaaaaa ttgttttgta aatctgtgga gaataccgca ggaagaaagg aaaaacgaaa
     2461 actcgcccgg atgggctgtt aatctctcgg ccaaaaaaga aaagccaaaa gaagaacagg
     2521 cagaaactaa tctattttaa aaacattcta taaattgaag tatatatccg aggggcgttt
     2581 tatgatgcag tacgccccct ttttttacaa ggaaaaattt atggcaaaaa gattttacga
     2641 cagcaataaa tatgatgatt catggttcag aaacttagca cctgatttaa aatgcgtgtt
     2701 tgattattgc ctgtgcaaat gcgaccacgc aggtattttg gagcttgata tagaaagtgt
     2761 aaactggcac acaaaaggaa aaaacactct caaagagatt caagaaaatt ttgcgacaaa
     2821 gtttatgttc ctgtcagaca ataaaatatt tattcctaac ttcctttact ggcagtataa
     2881 aaatgaactc aaccccagca atggagtaca ccgctgtgta tatgatttgt tagttttaga
     2941 agggatacgc gttgaaccct accttgcttc acaggtttta aaaacagact tcgaagagtg
     3001 ggtaagttta tgtaaacagc taaaagaaaa aggaatgaaa tatacagacc tattgaaaca
     3061 acgaaaagaa gagaaatgag gagtatcgga ttatggaaat ttacaaaccg tatcacctgt
     3121 tgcttttaga ctgggtgaaa aatcacgtgt actttaccca caaggacatt gttaaggtca
     3181 caaactgcaa ctgtccttac agcgttttgc gggattttaa aaagattgcc aaagtcacag
     3241 aagaatctaa aatgaagtca aaaaagcttg ttgactcaaa aggcaacgtg gttaacgtaa
     3301 caaagcgcta tattgagtac aagtttgagg gcttgaaaaa tgcagtcaat gaatgaggat
     3361 atcgcgaaga ctattcacaa ttgcaaaggc tatagaggtt taaagtggtg gcagctttta
     3421 tttagcagaa aaaaatggag aaatggagtt tatgaacaca ggtcaggtga aggacttgtc
     3481 ggcaaagcat ctggtgaaga ttctcggagt tactgacaag actattgata tgtacctttg
     3541 cggttacggc ttttcacaca ttgaaaccgt taaaaggggt acagaaaaaa tttataaaaa
     3601 tgtgacagaa aaagacttaa ttgctttaca caagctggct aacaggaaga aacgaagatt
     3661 tacaaactaa taaaacgagt attaatgatg aaaacgataa gggacgacaa aaatgaaatt
     3721 acaagaacta gaacaaaaat acgaagaact cggcaaagaa attgagaagc tgaaaaacga
     3781 gaagaaaggc aagaggtgga agcctgattg tggtgaagag tattattatg taggcttatt
     3841 tggccatgta ggcgaattga agtgggaaaa ttgctttgaa gaccaatatc tatattctca
     3901 aggcaactgc tttaaaaccg aacaagaagc caaagaacag tctgaaaacc tcaaaacaaa
     3961 agcagagcta agagcgttag cggaagaatt gaatggcgat gtggctgtgg attggaataa
     4021 ccgcatacaa gacaaatact acctttatat cagtagaact attaatgagt tatcaagctc
     4081 ttatgttgaa gtccatcaaa atcaaggcac aatctattgt ttagacccta ccttcaaaga
     4141 taaagccatt gagcgcatag gcaaagaacg tcttattaag atgattaata gcggggtgta
     4201 ggatggctaa agaactatca atcagagagg cagagtgggt gtatgggtaa agatgtaatt
     4261 attatttttt tgctaattgt cattagtcca tttttgttga taatagtgaa ttttaagatt
     4321 gacaaaagat tcgataaatc agtaggcagt gttttttgtg atgacaaaaa aatttacgaa
     4381 gggcgattat atgtagtgga taaagattta gcgacagaga atttacaatc tccannatgt
     4441 ttgacgtttc tatccgcgat tttaataacc catttcaaac tcaaaaaaga acattttgta
     4501 aggatttaag aattgaggct aaaaatgact aaccatatag aacaaatgat gaaagcggcg
     4561 ggagtgaaac caaggttcta tatggaagta aatgtaggag accttgattg taacttccag
     4621 gaagtttcag aaaaaacggt gaaaaaacta tgggagaatt ggggatttca tttgcaatgt
     4681 tcagattatt ggatggagga tgaagaggcg gaaagtatcc ctgaaaattt tgaagatttt
     4741 aaaaaatctg atttttggga aaagaaatac cnnnnnnnnn nnnnnnnnnn nnnttaagct
     4801 gataggagag atacccttag gttttcatta tacacaacct tatgatattt acgcattaca
     4861 ggtaacacag atggcaggtt tctatggaag gttctacgtg tctaaaaaaa gctttgaaga
     4921 ccttattgcc attgttattt ttgagctttt aaaagttaac aaactcgaca aagcagaann
     4981 tttggaggaa taatggatat ttttgaattt gtaggaaaaa tagtttttga agatgttcct
     5041 gaaataataa cagaaaaaat ccccagagaa gcgggaaaga ccttagataa tatttcagaa
     5101 gctattgata attttttaag tgattagaga ggattttgta agaggactaa atactgtata
     5161 tcttatgaat gttttaaaca atggctagaa agcgagttgt aatgaagaat tacgagatat
     5221 ggttgacatc atcaaacggg gattcaaaaa gcttagtaaa acgctatccc tttgaaatcc
     5281 aagctgtcat ttggtgcttt atgaacaaat ttataaacag cggcagcgga tattatttcc
     5341 ttgatccaag agttgaaata aaggaggtaa acaatgacaa ctaacgaaca gataatgatt
     5401 gaaaatagcc gttacaagca agcccttgat gagattgaga agattgtaac attagataaa
     5461 acacacatta agtacgcagg ttcaactctg gttatttgcg atgatatcct cgacatcatc
     5521 cgcaaggcga aaggagaag
//
LOCUS       DABS01000058            2834 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_23804, whole genome shotgun sequence.
ACCESSION   DABS01000058 DABS01000000
VERSION     DABS01000058.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2834)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2834)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2834
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..226)
                     /locus_tag="CPT85_02205"
     CDS             complement(<1..226)
                     /locus_tag="CPT85_02205"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25692.1"
                     /translation="MAFLENLEEDLRDEIAQDLIQIILGELETNKDGEIFQLGENKIT
                     EYKRWYDKNLSLHSAVEIIKNLDDEQRKEII"
     gene            396..638
                     /locus_tag="CPT85_02210"
     CDS             396..638
                     /locus_tag="CPT85_02210"
                     /inference="COORDINATES: protein motif:HMM:PF01734.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25693.1"
                     /translation="MFENKEVIKILSVDGGGIRGMIPAVLLSEIEKQTGKSISDCFDF
                     MAGTSTGGLLTLFLNLKNHGPAXNWIIRTGRRSYFP"
     assembly_gap    595..596
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            598..1389
                     /locus_tag="CPT85_02215"
     CDS             598..1389
                     /locus_tag="CPT85_02215"
                     /inference="COORDINATES: protein motif:HMM:PF01734.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25694.1"
                     /translation="MGLYEQGGGVIFHKKVDVKEIGVKDFFRHFRKNVKTIANGPKYN
                     VDGINVVLNKYVGDSTLEDTIKPCLIXESRTATFFTNYQDKFKNLKIKDIARATSAAP
                     TYFEPIKILDRGTFIDGGMGANNPAMCAYVEVLKLLRAQGVNPMHKKIVVVSIGTGLT
                     KESYEYNEMKDWNALNWLMGPLLSTFFDANSSTVEYQLQQLLPPEDYFRFQLAFPDEK
                     GIADMDNAEPKNIKRLKELAFEAVNNEWKDDINQLCELLKTQAPV"
     assembly_gap    809..810
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1492..2670)
                     /locus_tag="CPT85_02220"
     CDS             complement(1492..2670)
                     /locus_tag="CPT85_02220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018211252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="DAB25695.1"
                     /translation="MKRAIILVIDSMGCGAMSDCADYKDIQECNTLCNVAKANGGLNL
                     PTMQKMGIGNLGNVMGVAPEKETNAQYGIMREVSKGKDTTTGHWEIAGLVLDEPFRVY
                     PDGFPSDVIEKFIEKTGCGGVLGNYPASGTKIIEDLNDEHHKTKFPIVYTSADSVFQI
                     AVDVDVIPLEELYRMCRIAREILVGEHNVSRVIARPYHILDGKPTRISKDRRDYSVEP
                     PKPTVLNEIIEKGGRVVGIGKIEDIYVKSGISHAIHTGSNKEGLELTLQALNGSLELD
                     KIRIANSQEPPKSELIFTNLVDTDMLFGHRNDWKGYGKAIEEIDAFLPQIMEAMTQED
                     ILFITADHGCDPTVPGTDHTREQVPLLVYSKSKNFEPKNLGILPTFAYIADEVRKWLF
                     "
BASE COUNT          858 a          534 c          509 g          929 t
ORIGIN      
        1 aaattatttc ttttctttgt tcatcatcga gattcttaat aatctctaca gcggaatgaa
       61 gcgaaagatt tttatcatac cagcgtttgt attcagtaat tttgttttcg ccaagttgaa
      121 aaatttctcc gtctttgttt gtctctaact cgccaagtat aatttgtatc aagtcctgtg
      181 caatttcatc tcttaaatct tcttcgaggt tttcaagaaa agccataaga tgacttaaat
      241 caggatcttt atcataccag cgcacgtatt tgttcataac aatcaataaa atagcatatt
      301 tttaccaggg cgtaaagatt ttgcttggaa gttgtgagac cgtatgataa aattagttat
      361 tcaatttagg aaattaagaa atacggagag ttcatatgtt tgaaaataaa gaagtaataa
      421 aaattttatc tgtcgatgga ggtggaataa gaggaatgat tccggctgtt ttgttgagcg
      481 aaattgaaaa acaaacaggc aaatccataa gtgattgttt tgactttatg gctggcacat
      541 caactggcgg acttttaact ttgtttttaa acttaaaaaa ccacggaccc gcatnnaatt
      601 ggattatacg aacagggcgg aggagttatt ttccataaaa aagttgatgt gaaagaaata
      661 ggggtaaaag actttttcag acattttaga aaaaatgtaa aaacaattgc aaacgggcca
      721 aaatacaatg tggatggcat taatgttgta ttaaataaat atgtaggtga ttcaacactt
      781 gaagacacaa taaaaccctg tcttattann gaatcccgca ccgcaacctt ttttacaaac
      841 tatcaggaca aatttaagaa cctgaaaatt aaagacatag caagagcaac ttccgcagct
      901 ccaacatatt ttgaacccat aaaaatttta gatagaggta cttttataga cggaggaatg
      961 ggggcaaaca atcctgcaat gtgtgcttat gttgaagtat taaaactttt aagagctcaa
     1021 ggtgttaatc ccatgcacaa aaaaattgta gttgtttcaa taggtacagg cctgacaaaa
     1081 gaatcttatg aatacaacga aatgaaagac tggaatgctc ttaactggct aatggggccg
     1141 ttactgtcaa ctttctttga tgcaaacagc tctactgttg aatatcagtt gcagcagctg
     1201 ctgccgccag aggattattt cagattccag cttgcattcc cggacgaaaa gggcatagca
     1261 gatatggata atgctgagcc gaaaaatatc aaaaggctta aagaactggc ttttgaagcg
     1321 gtaaataacg agtggaaaga cgatatcaat cagttatgcg agcttttaaa gactcaagct
     1381 cctgtttaat attgtccctg gcttttgttt catagttaag ttgaaaaaag gagtttctaa
     1441 gatggtcgag attgtgatat cgccgacctc tctagtatgc tcgaacatca tttaaaacag
     1501 ccattttctt acttcatcgg ctatatatgc aaaagtcggc agaattccaa gattttttgg
     1561 ctcaaagttt tttgactttg aataaacaag cagaggcacc tgttcacgtg tatggtcagt
     1621 gcccggaaca gtcgggtcgc agccatggtc agccgtgata aagagaatgt cctcctgcgt
     1681 cattgcttcc atgatttgag gcaagaatgc atctatttct tcaatagcct ttccgtagcc
     1741 tttccagtca tttctatgcc cgaatagcat atcagtatca acaaggtttg tgaaaataag
     1801 ctctgatttc ggcggttctt gagagtttgc tattcttatt ttatccagct caagtgagcc
     1861 gtttaatgct tgtaatgtca attccagccc ctctttgttg gaacctgtat gaattgcatg
     1921 agaaattccg gattttacat aaatatcttc aattttgcct atcccgacta ccctgccgcc
     1981 tttttcgata atttcattta aaacagtagg tttaggaggt tctacagagt aatctcttct
     2041 gtctttagaa attctggtcg gttttccgtc taaaatatgg tacggccttg caattacacg
     2101 agaaacattg tgttctccaa caagaatttc tcttgctata cggcacattc tgtataattc
     2161 ttctaacgga attacatcaa catcaactgc aatctgaaaa acgctgtctg cgcttgtata
     2221 aacaatagga aacttcgtct tatgatgttc gtcattcaaa tcttcaataa tttttgtgcc
     2281 agaagccgga taatttccca gcactccgcc gcaccctgtt ttctctataa acttttcaat
     2341 tacatcagaa gggaatccgt cggggtaaac tctgaaaggt tcatccagca caagccctgc
     2401 gatttcccag tggcctgttg ttgtgtcttt tccttttgaa acttctctca taattccgta
     2461 ttgggcattt gtttcttttt cgggtgcaac tcccattaca ttaccgaggt ttcctatacc
     2521 cattttctgc attgttggaa gatttaatcc tccgtttgct tttgcaacat tacaaagtgt
     2581 gttgcattct tgaatatctt tataatcagc acagtcgctc attgccccgc agcccattga
     2641 atctataact aaaataattg ctcttttcat attattaact ccttatacaa tttattttag
     2701 catatataat atcaagttta tttaattatt ttacagttaa caaaatccca ttttctgttc
     2761 tttatagcat ctagtatttc tgacgctttc attttaggaa catttaatgc atccttttca
     2821 ccgaatatat tgac
//
LOCUS       DABS01000059            2609 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_24144, whole genome shotgun sequence.
ACCESSION   DABS01000059 DABS01000000
VERSION     DABS01000059.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2609)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2609)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2609
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            1..1256
                     /locus_tag="CPT85_02225"
                     /pseudo
     CDS             1..1256
                     /locus_tag="CPT85_02225"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     start; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1177..1548
                     /locus_tag="CPT85_02230"
                     /pseudo
     CDS             1177..1548
                     /locus_tag="CPT85_02230"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1227..1240
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1545..2198)
                     /locus_tag="CPT85_02235"
     CDS             complement(1545..2198)
                     /locus_tag="CPT85_02235"
                     /inference="COORDINATES: protein motif:HMM:PF00246.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25690.1"
                     /translation="MIYADIEAKINTKNGNEILLLKQEPKDRDYEKTVLIAGVIHGDE
                     PDGEYLINRYLSNKTDTKNRLLFIPCLNPDGKAQNKRTNANNVDINRNFPAKNWELTE
                     KGDFFGGEKPASEVETQFLIYIIERYVPDLIITLHEPYSVVNYDGPAKSEAQKISDIT
                     GYKVEESIGYPTPGSFGTYCGIEKNIPTITLELPEKSPKDKLWETNKGIFDYLAKEY"
     gene            complement(2198..>2609)
                     /locus_tag="CPT85_02240"
     CDS             complement(2198..>2609)
                     /locus_tag="CPT85_02240"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="DAB25691.1"
                     /translation="SKQLTGDNDKYDVSVMNLIIPQRAKNKEAALKFALFLTNKNNQV
                     ELAKLTTILPVNNESLKDPYFNQYNNNDTISKARYLSAQQLNNLQKQVKFKNNRKEII
                     TLLNTAVQQIILSKTDTKTLLENTAKNWKRLEDQ"
BASE COUNT          775 a          443 c          483 g          894 t
ORIGIN      
        1 tatcaacatt gcttgtaaca gcaagtcttt ctataggaat gccttctttt gcggcaatga
       61 ataacggtat atggattaat gacttaaaaa cattattcac aagaaatcag gcaatcattc
      121 tggctattaa tataagaagc tttaacgctg tagataaaaa cggaaatgac attattgaac
      181 ctgacaaagg cgaaattccg ggtaattttg taaacgcgat tggaagactt gatgaaatcg
      241 cttcacaagg cataaacacc attcaccttt tgccgataac tccagtaggt aaggtaaaag
      301 caatgggtac agcaggttct ttatatgcaa tatctgattt tacaaaattg aatcctcagc
      361 ttgatgaccc gtctaatgat ttgacagtcg aacatgaagc taaaaagttt atcaatgaat
      421 gtcacaaaag aaatataaga gtcattgttg atttgccaag ttgcgggtct tatgatttgt
      481 atttgtcaaa ccccaatctc tttgtaacag gtgcagacgg aaaacccgtt gttcctgctg
      541 attggacaga tgtaagactt tttaaagtta caaatccgga tggttcttta aacgacgaat
      601 tattcattca atacaaaaaa tttgtggacc ttgttcaaag aattggtgca gatggcataa
      661 gagccgatgt tgcaacctcc aaaacctttg acttctggca gaagcttatt tcttatgcca
      721 gaggaaatga cccgcagttt ttattccttg cagaagcttc agaaagctgg agtcagcctg
      781 tagcgccaaa tgcgcctttt actccttatt acaaactgct tgaagcaggc tttgacggat
      841 ggtatggcag cttttttgat tttaaagact ggaaaacaca agataaattt gaaaaacagt
      901 taagtctcat caaaaccata aaaaaagaat ttgacgcaaa aaatcaacca aaagccgtta
      961 taggcagttt tgcaacacat gatgaaatgt ctccgattat cacaggcggg atgccgtttg
     1021 ctgatatgat tatttggctt caggcaacat tgccagttaa ctcttatttt gttgatggtt
     1081 tccaatccgt agactcatac cagtatcaat atgcaaatca aaaagctgcc aaaacttaca
     1141 cagatgatga ttattattat gtacacaaag gaaaatttga tatattcaat ttttcaagaa
     1201 aaccaggctc tgttaacaaa agactgnnnn nnnnnnnnnn agataatggc gtctgaaatt
     1261 atagacaaag gtgacttgtg ttttctaaaa acaaacaatg ctcatatctt tgcttacatg
     1321 ataaattaca gattttcatc aattcttgtt gtgataaaca aagaccttgt gtacaacaat
     1381 tctgtcagtg tacctgtaaa agggcttaaa gaaacagata taattgttcc tcttgcattt
     1441 accacaacac ccggtattga aaaaggaaaa atcaatgttg atttaagacc cggtgaagct
     1501 acagtcttta tgataagcag aggcggtgct gcaaataaaa agaattagta ttcttttgca
     1561 agataatcaa agataccttt attagtctcc cagagtttat ctttgggaga tttttccggt
     1621 aattccagag taatagttgg tatgtttttt tcaattccgc aatatgtacc aaaactgccc
     1681 ggagttggat agcctattga ttcttccact ttgtagcctg ttatgtctga aatcttttgt
     1741 gcttctgatt ttgcaggacc gtcataattc actacgctgt atggttcatg tagggttatt
     1801 atcaaatcag gtacgtatct ttcaattatg tatattaaaa actgtgtctc aacctcactg
     1861 gccggttttt ctccaccgaa aaaatcccct ttttctgtta attcccagtt tttggcagga
     1921 aaatttctgt tgatgtcaac attgtttgca tttgtccttt tgttttgagc tttgccatca
     1981 gggttaaggc acgggataaa caagagcctg ttttttgtgt ctgttttatt tgaaagatag
     2041 cggttaataa ggtattctcc gtcaggctcg tcaccgtgaa taacacctgc tatcaatact
     2101 gttttttcat agtctctgtc ttttggttct tgttttaaaa gtaatatctc attaccgttt
     2161 tttgtgttaa ttttagcttc tatgtctgca tatatcatta ttggtcttcc agtcttttcc
     2221 agttttttgc cgtattttcc agcaatgttt ttgtatctgt ttttgatagt ataatttgtt
     2281 gaacagctgt gttgagcaag gtaattattt ctttgcggtt gtttttaaat ttaacctgtt
     2341 tttgcagatt attgagttgt tgagcgctca ggtatctggc ttttgatatg gtgtcattgt
     2401 tattatattg attaaaatac gggtctttta aagattcgtt gttaacagga agaattgtgg
     2461 taagctttgc aagctctacc tgattatttt tgtttgttaa aaacagagca aattttaaag
     2521 ctgcttcttt gttttttgcc ctttgaggaa ttataagatt cataacagac acatcatatt
     2581 tgtcgttatc tccggtgagc tgttttgat
//
LOCUS       DABS01000060            3171 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_24965, whole genome shotgun sequence.
ACCESSION   DABS01000060 DABS01000000
VERSION     DABS01000060.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3171)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3171)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3171
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     assembly_gap    200..201
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            255..1634
                     /locus_tag="CPT85_02245"
     CDS             255..1634
                     /locus_tag="CPT85_02245"
                     /inference="COORDINATES: protein motif:HMM:PF02321.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25687.1"
                     /translation="MESLKEGHGIYDEATQRDLDKQIKEGLDINLIPVDLETCIKVAL
                     KNNYDIKIAATNAQEAKWLYARAVADLIPDFYYRYQIQALNGEFLVGDILPRVIRQNP
                     IYSGLTIDYPLGNGTIFYNMASQSNLYQAQKHNVKYTQSELLLKTTLYYYELLEAKLN
                     IEVLLSNLRDRHEQLKLMQARYQIGIGSKYDILRADAQYADAKQELISALNTLRLQQA
                     KLSNIMGVEVTLTLYPFEHGAQPRELIEKKNNIDCLYNVALQTREDIKTKRAQIRSLV
                     NLKNKNYADFFPYVELTYEFAKVGVTGNTSLRTNHTWSLNVTVPLGKKMGVGTITQKN
                     ADLAKIKSARYELTNLERQVKESIVGSYYSSRTALERVEANKKQVAAADEGLKFSLVG
                     FDVGQNTFIDVLTSQTEKTRARQQLISSVIAYNKAQAQLLFDTGIISPKTLLLNYRGL
                     QNPNKTKMN"
     gene            complement(1640..2170)
                     /locus_tag="CPT85_02250"
     CDS             complement(1640..2170)
                     /locus_tag="CPT85_02250"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25688.1"
                     /translation="MSSVAQLVFQSLSMLTASSSGISKTALTNFKTLLENENMTDRNA
                     YKLTGTILNRFSDLSSDGDVITEDDFTAAVKYSFAQNLTQTSDLNRLINEGNLNISSD
                     IADLYGYETAQTIAIVQFLDTLSEETLGSLMSEIKNAQAKSSVKPDSYYGNTNNIQDY
                     KTVTADQLRGRINIAV"
     gene            complement(2358..>3171)
                     /locus_tag="CPT85_02255"
     CDS             complement(2358..>3171)
                     /locus_tag="CPT85_02255"
                     /inference="COORDINATES: protein motif:HMM:PF00575.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="DAB25689.1"
                     /translation="EEDDDGRFLLSHKKVAMAYAWKEIETLKEEDATVEGTVVSVVKG
                     GVLVEVKGVRGFVPSSHLRAKDTDNIVGQTIELKILSLDPSQNNFILSNKKVYSDAQD
                     ENKENMFTSLEVGQVVKGEVVRITDFGAFIDIGGMDGLLPLSQMSWRWVDHPSDVLKI
                     SDTINVEIIGIDHDKQRVSLSLKNLEADPWIEAKNKINEGDKIEGTITRIKHFGAFVE
                     VFPGVEALLPNNEVVDYQNKNNCILASGDKINTTIIKFNPDDRRISLSLNED"
BASE COUNT         1034 a          608 c          577 g          950 t
ORIGIN      
        1 atacttttgc ataatgttta ttatgcttta tgcttaaatt tttatttatg gtgattatta
       61 tttgtgatta atcctacaaa atacccgtca ggctatgaga aattccaaca ttttcaaata
      121 agctttctta tgtgtacaag cacttgaaaa tggggagaat gtgaaaaaat taatactaat
      181 atttttaata aattttttcn ntagcacagg agagcgaaga cggcctgata tggaactatc
      241 gttcagacag gtttttggaa tccttaaaag aaggccatgg catttatgat gaagctacac
      301 aaagagacct tgataagcaa ataaaagaag gtcttgatat aaatcttatc cctgttgatt
      361 tggaaacttg cataaaagtt gctttaaaaa acaattatga cataaagatt gctgcaacaa
      421 atgctcaaga ggcaaaatgg ctctatgcca gagcagtggc ggatttaata cctgattttt
      481 actacagata tcaaatacag gctcttaacg gggaatttct tgttggtgat attttaccaa
      541 gagttatcag gcagaatccg atttacagtg gacttaccat agattatccg cttggtaacg
      601 gcactatatt ttacaatatg gcaagccaga gcaatctcta tcaggcgcaa aagcataatg
      661 taaagtacac acaaagtgaa ctgctattga aaaccacgct ctattattac gagcttcttg
      721 aggcaaaatt aaacatagaa gtgctgctct cgaatctcag agacaggcac gaacagttaa
      781 agctcatgca ggccagatat caaataggta taggttcaaa atacgatatt ttgagggctg
      841 atgctcaata tgcggatgca aagcaagagc taatctcagc attaaatact ttaaggcttc
      901 aacaggcaaa actttcaaat attatggggg ttgaagtcac acttacgctc tacccgtttg
      961 aacacggtgc tcagcccaga gaactcattg aaaagaaaaa caacattgac tgcttataca
     1021 atgttgcgct gcaaaccaga gaagatatta agacaaaaag agcacagatt cgctctctag
     1081 taaatttaaa aaataaaaat tatgccgatt ttttccccta tgtagagcta acatatgagt
     1141 ttgcaaaagt cggcgttaca ggaaacacaa gcctgagaac aaaccatacc tggagcctga
     1201 atgtgacagt gccgcttggt aaaaaaatgg gtgtgggaac tatcacacaa aaaaatgcag
     1261 accttgcaaa aatcaaaagc gcaagatatg agctgacaaa ccttgaaagg caggtaaaag
     1321 aaagcattgt tggttcatat tacagctcaa gaacagcact ggaacgtgtt gaagcaaata
     1381 aaaaacaggt tgcagctgca gatgaaggcc taaagttctc tttagttggc tttgatgtgg
     1441 gccaaaacac atttattgat gttttgacat ctcaaacaga aaaaacacgg gcaagacaac
     1501 agttaatcag ctctgttatt gcatacaaca aagcacaggc acagctttta tttgacacag
     1561 gcataatcag ccctaaaaca ctgctattaa actatcgcgg attacaaaac ccgaacaaaa
     1621 caaaaatgaa ttaaaactgc taaaccgcta tatttatccg ccctcgcagc tggtctgcag
     1681 tcactgtttt atagtcttgt atattattgg tattgccgta ataagagtcg ggttttacag
     1741 aagacttcgc ttgtgcattt ttaatttccg acataagact ccctagcgtt tcttctgaca
     1801 aggtgtctaa aaactgcact attgcaattg tttgtgctgt ttcatagcca tacaaatccg
     1861 caatatcaga ggaaatattt aggttacctt cattaatcaa tctgtttaaa tcagatgttt
     1921 gtgtaagatt ttgcgcaaaa gagtatttta ctgccgccgt aaagtcatct tccgtaatca
     1981 cgtctccgtc ggaggataaa tccgaaaatc tgttcaggat agtgcctgtc agcttatagg
     2041 catttctatc tgtcatattt tcattttcca gcagggtttt gaaattggtc aaagctgttt
     2101 tgcttatgcc ggaagaagat gccgtaagca tcgacaaaga ttgaaacaca agctgcgcaa
     2161 cagaagacat agcatcttga gcctgtttgt acacgctaaa cgaagaaaca gtcgaaatac
     2221 tattggacgc agttatatta ttaatcgatg agacgctatt aatcataaaa aaacacctgt
     2281 atcctaccat tatagagtat atattatata aaaacaagtg ttcttttatg atttactaat
     2341 ttaataaata tttacaatta gtcttcatta aggctaagac tgattcttct gtcatcagga
     2401 ttaaacttaa taattgtagt atttatttta tcgccggaag caagaatgca gttatttttg
     2461 ttctgatagt ccacaacttc gttgttaggc agcaatgctt ctacgcccgg gaacacttca
     2521 acaaaggcgc caaagtgttt gattcttgta attgttcctt cgatcttatc gccttcatta
     2581 attttatttt tagcttcaat ccaaggatca gcttcaagat tcttcaagct caagctgaca
     2641 cgctgtttgt cgtggtcaat accgataatt tcaacattaa ttgtgtcaga aatttttaac
     2701 acgtcagaag gatggtctac ccatctccag gacatttgag acaacggcaa caggccgtcc
     2761 ataccgccga tatcaataaa tgcaccaaaa tcagtaattc ttacaacttc gccttttact
     2821 acctggccta cttccagact tgtaaacata ttttctttgt tttcatcctg tgcatcggag
     2881 tagacttttt tgtttgacaa aataaagttg ttttgagacg gatcaagaga aagtatcttt
     2941 aactcaattg tctggccaac aatgttatca gtatcttttg ctctaagatg gctggaggga
     3001 acaaagcctc ttactccttt aacttcaacc agcacgccgc cttttactac agaaacaact
     3061 gtaccttcca ctgttgcatc ttcttcttta agagtttcaa tttctttcca tgcataagcc
     3121 attgcaactt ttttatgtga caggaggaat ctgccgtcat cgtcttcttc t
//
LOCUS       DABS01000061            5595 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_20154, whole genome shotgun sequence.
ACCESSION   DABS01000061 DABS01000000
VERSION     DABS01000061.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5595)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5595)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5595
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            106..930
                     /locus_tag="CPT85_02260"
     CDS             106..930
                     /locus_tag="CPT85_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018616789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="DAB25681.1"
                     /translation="MGYVYQKKLTMKGCNAVVIVAVSYTMLSLLCIPLMSVYGRPHPP
                     SSFYYYGLIVGLLGALGNGFMVKALKKGELSVLGPINSYKAVLGLFIAMIVLREMPGF
                     AGIIGIILIVWGSYFVLDTMGERFTLALLKNKEIQYRFLALFFCSIEAVFIKKMILLS
                     SVWDVFVAWCFFGALFSIFLLKFEDINVSKIKDVLSTRNGAFFISIAICVGIMQYTTN
                     YIFERMNVAYALALFQLSAVVSVVLGHRIFAEKEIFKKTMGSLIMIAGAVLIVLYN"
     gene            934..1602
                     /locus_tag="CPT85_02265"
                     /pseudo
     CDS             934..1602
                     /locus_tag="CPT85_02265"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1117..1146
                     /estimated_length=30
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1618..3378
                     /locus_tag="CPT85_02270"
     CDS             1618..3378
                     /locus_tag="CPT85_02270"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25682.1"
                     /translation="MTNDLTNELNFELNLSHDELVKRTSKDCLIPKEMLKEDAKEYEA
                     LADGDKKALVHLVKAAKAIDEVFMKQDNPKNLAFKAYLEREVNNGNEDAKMTLALFNA
                     QIGMNAVDSEANKIFLAKGENELPGKGFYPADLTKEEFHTILLKMIKDGEIQEVKNIL
                     NQRSMVVRDGQKLKGIDYTEYFAKEFSYIADELEAAAEVSTNEDFNKYLKLQAIALCE
                     NNPKNDAYADKKWAELQDTPLEFTISREQYADEMTGTVVENEELNKLLEENGIEPISK
                     DSIGIRVGIVNKEGTAKLLEIKKYMPVLAQHMPYKDEYEQNIGHGDDEKQTMVDVDIV
                     TLRGDEGTYRGGITLAQNLPNNDKPSLKIGGGRRNVYHRQIRISTSPEAKIKRQKRLD
                     ETLCKELHQYYNQEADHWFTIGHENVHSLGPKSGTEALGKYKNIIEENKADMGSLALL
                     DVLVELGMYSPEEKKQILVTYAADNFLKAKPNLSQAHRVRTVMQSKYFLENKAVWLNE
                     DGVLEIDMDKMVPTAQKMLAEIIRVQLSKDFATGEKYVLDNFVWTDEMEIISKKLKEI
                     DKSLNGTLKTPLADKLAQEI"
     gene            3442..3909
                     /locus_tag="CPT85_02275"
     CDS             3442..3909
                     /locus_tag="CPT85_02275"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25683.1"
                     /translation="MSVSNISKLRKFAAVNSTFTRLMSSLSPKQPTVDYNKYVKISRN
                     LDKDTFEYVNGIKETLGKYAKRKNIEVTIDPVKKEPSKVSINIFSRENPVMEKIYDFL
                     ELIHDEPVKINEKPVIVTINPQDKTEALPPSHRILRAVRNTIKELDSXGNLKK"
     assembly_gap    3889..3890
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    4101..4106
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4221..4691
                     /locus_tag="CPT85_02280"
     CDS             4221..4691
                     /locus_tag="CPT85_02280"
                     /inference="COORDINATES: protein motif:HMM:PF01832.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25684.1"
                     /translation="MLKTKTMAIIHMIFLKNLKVAQKILINTLRVNLLEKVKNXLQEK
                     YGVSASVLAAIAMNESARGTSDGAVYLNNVGGVMTASSNYTELAKFDSVDDCLESMAS
                     NLRRNYINEGLKTISQVHEKYCPIGAKNDHKGMNGGWGRVVSSINNDIIKTAKA"
     assembly_gap    4339..4340
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4780..5046
                     /locus_tag="CPT85_02285"
     CDS             4780..5046
                     /locus_tag="CPT85_02285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020489178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25685.1"
                     /translation="MIVEKRDDVYPERGLHEYGNVDFADPVNKKYPIDNEEHIRAAWS
                     YIHMPRNYEKYSQNDIKTIENRIIQAWKSKIDPAGPPAENQDKL"
     gene            5082..>5595
                     /locus_tag="CPT85_02290"
     CDS             5082..>5595
                     /locus_tag="CPT85_02290"
                     /inference="COORDINATES: protein motif:HMM:PF00348.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25686.1"
                     /translation="MSFNEEYKAITSLVNSDLEKLDFQIASYFSKKQDEHNEILPIIN
                     EFFAHKGKRIRCVLIFLFVKALNKEIDDFCLKIAAATEIIHNATLIHDDIIDCSIMRR
                     GKKTINFDYDSKLAVLCGDYLLAEVLKILADTKDERIRKIYSDSVSRMILGEIKQYFN
                     RFKILSIEQYL"
BASE COUNT         1986 a          844 c         1063 g         1662 t
ORIGIN      
        1 ataatataaa tctgactgtc ggaagaagaa tgtgaaaagg aagaaacaat tttatcttta
       61 attcttttaa taggtgctgt atttttgaga attttctctg taagtatggg gtatgtttat
      121 caaaaaaaat taacaatgaa aggctgtaat gctgttgtta ttgtagccgt gtcttatact
      181 atgcttagtc ttttgtgtat tccgcttatg tcggtttacg gcagacctca tcctccttcg
      241 agtttttatt attacgggct gatagtaggg cttttggggg cacttggcaa tggatttatg
      301 gtgaaagctc ttaaaaaagg agagctttct gttttggggc ctataaattc ttataaggct
      361 gtactcggac tttttattgc aatgattgta ttaagagaaa tgccgggttt tgcaggtatt
      421 attggcataa tactaattgt atggggcagc tattttgtgc ttgatacaat gggtgagcgt
      481 tttactcttg ctttgctcaa aaacaaagaa atacaatacc ggtttttggc attgttcttt
      541 tgttcaatag aagctgtttt tatcaaaaaa atgattctgc tatcatctgt gtgggatgtt
      601 tttgtagcgt ggtgtttttt cggggcatta ttctctatat ttttgcttaa gtttgaagat
      661 attaatgttt caaaaataaa agatgtgcta tcaacaagaa acggagcatt ttttatcagt
      721 attgcgatat gtgtggggat tatgcaatac actacaaact atatatttga aagaatgaac
      781 gttgcttatg cactggcatt gtttcagctt agtgctgttg tcagtgttgt attggggcac
      841 agaatttttg cggaaaaaga aatttttaaa aaaactatgg gctctcttat catgatagcg
      901 ggtgctgttt tgattgtgct gtataattaa tttatgtttg aaaatataaa aaacaatata
      961 gatttttgga taagaagcaa tacaaaattt tcacgcaaaa attttgttga aactgatgaa
     1021 aaaattcttt atagaaacta tctggaaaat ctttatacct ttgatatttt agagcaatgt
     1081 tttgtaaaaa aagcatatag taatccaaaa attcttnnnn nnnnnnnnnn nnnnnnnnnn
     1141 nnnnnngagt attctttttt tgattcattt tgttccggtt tttcgcttga cggggtcgag
     1201 atagatgcat acaggttgta tagcaatttt tattcacgtt atgaaacagc aaagttttac
     1261 acaagagggc tcaaaaacac aagatatatt gcatcaaatc ttttgaatat caaagacagg
     1321 tatgatttta ttgtctggtt tttgcctttt gttttaaaag aacctcatat aaaatggggg
     1381 ctgccaatgg cgtgctttat gcctcaagag cttttagagc atgcaatgtc tcttttaaac
     1441 cttaacggtc agatgcttat aattaatcag ggcgaatccg aggctgctgc acaaaaaaag
     1501 ctgcttgata gtctaaaaat aaaatacgaa gaaaaaggga ttgttaaaag tgattttttg
     1561 cagtacaaaa acgatagata cgcattttta ataaataatt aacaggagtt tataaatatg
     1621 actaatgatt taaccaacga attaaatttt gagctgaatc tttcgcatga tgagcttgtg
     1681 aaaagaacaa gtaaagactg cctcattcct aaagaaatgc taaaagaaga tgcaaaagaa
     1741 tatgaggcac ttgccgatgg agataaaaaa gcgcttgtgc accttgtaaa agccgcaaaa
     1801 gctattgatg aagtttttat gaaacaggac aatcctaaaa accttgcatt caaagcatat
     1861 ttggaaagag aagtaaataa cgggaacgaa gatgccaaaa tgactcttgc tcttttcaat
     1921 gcccagatag ggatgaatgc tgtagattca gaggctaata aaatttttct tgccaaaggt
     1981 gaaaacgagc ttcccggtaa aggcttttat cctgctgacc tgactaaaga agagtttcat
     2041 acaatacttt taaaaatgat aaaagacggt gaaatacaag aagtaaaaaa tatcttgaat
     2101 cagcgttcca tggttgtaag agacggacaa aaactcaaag gtattgatta taccgaatat
     2161 tttgcaaaag agttttctta catagcagat gaacttgaag cagctgcaga agtgtctact
     2221 aatgaagatt ttaataaata tttgaaattg caagccattg ctctttgtga aaataacccc
     2281 aaaaatgacg cttatgccga taaaaaatgg gcagagcttc aagatactcc tttggaattc
     2341 acaatttcta gagaacagta tgctgacgaa atgacaggaa ctgttgttga aaacgaagaa
     2401 ctcaacaaac tgctggagga aaacggcata gaacctatct ccaaagattc tataggcata
     2461 agagtaggta tagtaaacaa agaaggcact gctaaactgc ttgaaataaa aaaatatatg
     2521 cctgttcttg cacagcatat gccatataaa gatgaatatg aacaaaatat aggccatggc
     2581 gatgacgaaa aacaaacaat ggttgatgtt gatattgtta ctttaagagg tgatgaaggc
     2641 acatacagag gaggtattac acttgctcaa aatcttccga ataacgataa accttcactt
     2701 aaaatcggcg gcggaagaag aaatgtttac caccgtcaga taaggatttc tacaagtccc
     2761 gaagcaaaaa taaaaaggca aaaacgcctt gatgaaacac tttgcaaaga gcttcatcaa
     2821 tattataacc aggaggctga ccactggttt acaataggcc atgaaaacgt tcactcactg
     2881 gggccaaagt ccggaacaga agcgcttgga aaatataaaa atataataga agaaaacaaa
     2941 gctgacatgg gttctcttgc gcttttagat gtgcttgttg agcttggtat gtactcacct
     3001 gaagaaaaaa aacaaattct tgtgacatat gctgcagaca actttcttaa agcaaaacca
     3061 aacctatcac aggctcatag agtcaggaca gttatgcagt caaaatattt tctcgaaaat
     3121 aaagctgtat ggctaaatga agatggtgtg cttgaaattg atatggataa aatggttcct
     3181 acagcacaaa aaatgcttgc tgaaatcata cgtgttcaat tgtcaaaaga ttttgcaaca
     3241 ggtgaaaagt atgtgctgga caattttgta tggacagacg agatggaaat tatttctaaa
     3301 aaactcaaag aaatagacaa atccctcaac ggtacgctaa aaactcctct tgccgacaag
     3361 cttgcgcagg aaatttaatg ttttacaaat atgtatagtc gcagtataat ctaatcccga
     3421 caagaattag aaagttagcg tatgtctgta tcaaatatat caaaattaag aaaatttgct
     3481 gccgtaaatt caacattcac aaggcttatg tcatctttgt ctccaaagca gccgaccgta
     3541 gattacaaca aatatgtaaa aatctcacga aatcttgata aagatacctt tgaatatgtt
     3601 aacggcatca aagaaactct aggaaaatac gccaaaagaa aaaacataga agttacaatt
     3661 gaccctgtta aaaaagaacc gtctaaagtc agtatcaata tattttcaag agaaaatccg
     3721 gttatggaaa aaatttacga ctttttggaa ttgatacacg atgaacccgt taaaatcaat
     3781 gaaaaacctg tgattgttac aataaacccg caagacaaaa ccgaggccct gcctccttct
     3841 cacagaattt tgcgcgcagt tagaaataca attaaagagt tagattctnn tggaaatttg
     3901 aaaaaataat ttttatataa gcaatttttt ctcaaaaaat gtttttatat atataagaga
     3961 tttattgagg gaattatgac gggaattaat ccatttggat tttatgaaaa tatgaatttt
     4021 ggatttatgt ctaatccgtt ggaaacaggc tttttgcaga tgcctgcaat gtccaattac
     4081 tcaattgtgc caccgcttgc nnnnnnatat agatgatttt atttctgcat ttacaaaatt
     4141 gtgtgacaca tcactgttta cacccgcttt aaatgcagat tttgaccttt caatagatac
     4201 ctttacacca tcagcaaata ttgctaaaaa caaaaactat ggcaattata catatgatat
     4261 ttctcaaaaa tttgaaggta gcgcagaaga tattgataaa caccttgagg gtaaacttgc
     4321 tggaaaaggt aaaaaactnn ttgcaagaaa aatacggagt aagcgcatcc gtgcttgctg
     4381 cgattgcaat gaatgaaagc gctcgcggca caagcgacgg agctgtttat ttaaataatg
     4441 tcggcggtgt aatgactgca tcaagcaatt atacagagtt ggcaaaattt gacagcgtag
     4501 atgactgtct tgaatcaatg gcaagcaatt taagaagaaa ttatataaat gaaggcttaa
     4561 aaaccatttc acaggtacac gaaaaatact gtccgatagg ggctaaaaat gaccacaaag
     4621 gaatgaacgg cggatggggc agagtagtgt cttcaattaa taatgatatt attaaaacag
     4681 ctaaagctta atcgatagta caatcaggga atgtttttta tttttttata aattaaactc
     4741 cacataatac tactgatttt tgaacagtat aaaaggagaa taattgtgga aaaaagagat
     4801 gacgtatatc ccgaaagagg tttgcatgag tatgggaatg ttgattttgc agaccctgtc
     4861 aataaaaaat atcctattga taatgaagaa catatacgag cagcatggag ctatatccat
     4921 atgccaagaa attatgaaaa atactcgcaa aatgatatta aaacaattga aaatagaata
     4981 atacaagcat ggaaaagcaa aatcgacccg gccgggcccc ccgcagaaaa tcaggacaag
     5041 ttgtaatcat tgttatataa tagacaaaaa gaggaatcat tttgtcattt aacgaagaat
     5101 acaaagctat aacatctctt gtaaacagtg atttggaaaa gttggatttt caaattgctt
     5161 cttatttttc aaaaaaacaa gatgagcata atgaaatcct tccaatcatt aacgagtttt
     5221 ttgcgcataa gggtaaaaga atacgttgtg ttctaatatt tctttttgta aaagctttga
     5281 ataaagaaat agatgatttt tgtttgaaaa ttgccgctgc aacagagatt atccacaatg
     5341 ccacacttat tcatgatgac ataattgact gttctatcat gaggcgtggc aaaaaaacaa
     5401 tcaattttga ttatgacagt aagctggcgg ttttgtgcgg tgattacctt cttgcagagg
     5461 tgctcaagat tcttgctgat acaaaggacg aaagaatcag aaaaatctat tccgattcgg
     5521 tttctcgaat gatactcggt gaaattaagc agtactttaa caggttcaag atattgagta
     5581 ttgaacaata tcttg
//
LOCUS       DABS01000062            3143 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_18042, whole genome shotgun sequence.
ACCESSION   DABS01000062 DABS01000000
VERSION     DABS01000062.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3143)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3143)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3143
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..523)
                     /locus_tag="CPT85_02295"
     CDS             complement(<1..523)
                     /locus_tag="CPT85_02295"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25675.1"
                     /translation="MKKILIIREGAIGDVVHTTNVFRSIKETYPNVEIDYVTGPVPAQ
                     LLQNDSRLNRVIVLESKKYSYLFKLASQLRKEKYDLIINLQPSLRFKFLAFMCFAKKV
                     VNYKKTYKLHAVENFFRTAKKALKEIENPNDLKLEIPDDILERVKADIPQDKKIVIFN
                     TQTSPTRHGRKWPI"
     gene            complement(545..784)
                     /locus_tag="CPT85_02300"
     CDS             complement(545..784)
                     /locus_tag="CPT85_02300"
                     /inference="COORDINATES: protein motif:HMM:PF00583.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25676.1"
                     /translation="MYKXKKDFRGKGYARKAFTNAIVPIARELELPKITLTVNKYNFA
                     SIMAYEKLGFIRTSSVETDIGNGYVMDDYIYEFEL"
     gene            complement(709..1047)
                     /locus_tag="CPT85_02305"
     CDS             complement(709..1047)
                     /locus_tag="CPT85_02305"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25677.1"
                     /translation="MFDWVKIETDEQIKELCALAKEIWNEYSICFISQEQIDYMLEKF
                     QSEQVVKAQMNYQQYSYYFLEEDGENFGYFAVQKQKDNLFLSKIYIXXKRTSEAKAMQ
                     EKPLQMLLYR"
     assembly_gap    774..775
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1057..2085)
                     /gene="recA"
                     /locus_tag="CPT85_02310"
     CDS             complement(1057..2085)
                     /gene="recA"
                     /locus_tag="CPT85_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019107158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="DAB25678.1"
                     /translation="MAVKEKDTEAVAVSEEKNKALKLAIEKIEKDFGKGSIMKLGDKT
                     AVACEAIPTGALALDLALGIGGVPRGRVIEVYGPEASGKTTLAQHIVAECQKKGGIAA
                     FVDAEHALDPEYARALGVNVDELLISQPDTGEQALEIAEELVRSSAVDVVVIDSVAAL
                     VPKAEIEGAMEDQQMGLQARLMSKALRKLTGIVGKTNTTVIFINQLRQKIGVMYGNPE
                     TTTGGNALKYYSSVRLDIRRCDSIKKDDKDIGNRVRVKVVKNKVAPPFKTCEFDIIFG
                     KGICKLGCILDVAVSMDIVKKAGAWFSYNEEKLGQGREKAKEFFETHPEILEEVEAKV
                     REKLAAER"
     gene            complement(2147..2968)
                     /locus_tag="CPT85_02315"
     CDS             complement(2147..2968)
                     /locus_tag="CPT85_02315"
                     /inference="COORDINATES: protein motif:HMM:PF01556.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25679.1"
                     /translation="MKTLTXGGGAGGYQYSSSGVNFEDLGGFSDFFNSLFGGGFAAGG
                     GRSSRGGASFYEDLGGGFSSRSGRTSRQSSQSRKPAQDLNITQEIKVSAKDIFNQKPV
                     SVKINNLEKCTNCSGVGSMCSQCHGTGFVTYSKTLNVKIPAEVKEGQKIRLKGEGKLG
                     SDGTKGDLYLVVKFADKEYTINGTDLTKTIEVTPAEAVVGTKKEIQTLHGNINIKIPP
                     KTSCGAVLRLKGLGLPQKSGGYGNLNVKISLAVPKDLTAEQIKLYEQLLSLEQNK"
     gene            complement(2922..>3143)
                     /locus_tag="CPT85_02320"
     CDS             complement(2922..>3143)
                     /locus_tag="CPT85_02320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014163730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C biogenesis protein"
                     /protein_id="DAB25680.1"
                     /translation="RKLAKKYHPDVNKTPEASAKFKDINEAFEVLGDKDKRSRYDSLG
                     ANWQAGANYTPPPGFENFNXWRWRWRLSV"
     assembly_gap    2952..2953
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT          788 a          652 c          585 g         1114 t
ORIGIN      
        1 ttattggcca ctttcttcca tgcctggttg ggcttgtttg ggtgttaaaa ataacaattt
       61 ttttatcctg aggaatatct gctttgactc tttccagtat atcgtctgga atttccagtt
      121 taagatcatt tgggttttca atttctttaa gtgctttttt ggcagttctg aaaaagtttt
      181 cgactgcatg gagtttgtaa gtttttttgt agtttacaac tttttttgca aagcacataa
      241 aagcaaggaa tttaaatctt aaagacggtt gaagatttat tatcaggtca tatttttctt
      301 ttcgaagctg ggatgcaagt ttaaacagat aagagtattt tttgctctca agtactatga
      361 ccctgttgag tctagagtca ttttgcaaaa gctgtgcggg tacagggcct gtgacataat
      421 ctatttctac attaggatat gtctctttaa tacttctaaa aacgtttgtt gtatggacaa
      481 catcgcctat tgcaccttct cgtattataa gaattttttt cattgtattt ttctcatata
      541 aaacttacag ctcaaactca tatatataat catccatcac atagccgttt ccaatatcgg
      601 tttcaacgct tgaagtacgt ataaatccga gtttttcata cgccataatt gatgcaaaat
      661 tgtatttgtt aacggttaaa gtgatttttg gaagctccag ctctcttgct atcggtacaa
      721 tagcatttgt aaaggctttt cttgcatagc ctttgcctct gaagtccttt tttnntttat
      781 atatattttt gacaaaaaca ggttatcttt ttgtttttgc actgcaaaat aaccaaagtt
      841 ttctccgtct tcttcaagga aatagtagct gtactgctga taattcatct gagccttaac
      901 tacctgttct gattgaaatt tttcgagcat ataatctatc tgctcctgtg atatgaagca
      961 gatagaatac tcgttccaga tttcttttgc cagagcgcag agctctttta tttgttcatc
     1021 tgtttctatt ttgacccagt caaacattta tggctcctag cgttcagctg caagtttttc
     1081 tcttacttta gcttcaactt cctcaaggat ttcagggtgt gtttcaaaga attcttttgc
     1141 tttttcacgg ccctgtccga gtttttcttc gttgtagcta aaccatgcac ctgctttttt
     1201 cacaatatcc atgcttacgg caacatcaag aatacagccg agtttgcaga ttcctttgcc
     1261 gaatatgata tcaaattcgc atgttttaaa cggaggtgct actttgtttt taacaacttt
     1321 tactcttact ctgtttccga tatctttatc atcttttttg atagagtcgc atcttctgat
     1381 atcaagacgc acggaagagt agtatttaag ggcgtttccg cctgttgttg tttcagggtt
     1441 tccgtacatt acaccgattt tttgacgtag ctggttgata aaaataacag tggtatttgt
     1501 tttacctaca atacctgtta attttctcaa tgctttactc atcaaacgtg cctgcaagcc
     1561 catttgctgg tcttccatag cgccttcgat ttctgctttg ggcacaagtg ctgcaacaga
     1621 gtcgattaca acaacgtcaa cagcagatga tcgcacgagt tcttctgcaa tttcaagcgc
     1681 ctgttcacct gtatcgggct gtgaaatcaa gagttcatca acatttacgc caagagctct
     1741 tgcatattca ggatcaagcg catgttctgc atcaacaaat gctgcaatgc cgcctttttt
     1801 ctggcattct gcaacaatat gctgggcaag tgttgtttta ccggaagcct cggggccata
     1861 aacctcgata acacgtcctc tgggcacacc gcctataccg agagccaaat ccaatgcaag
     1921 agcacctgtc gggatagcct cgcaagccac tgcggttttg tcacccagtt tcataataga
     1981 acctttgccg aaatcttttt cgattttttc gatagcaagt ttcagcgctt tattcttttc
     2041 ttcagaaaca gcaacagctt ctgtatcttt ttctttaact gccataaata attctcccat
     2101 agtcttttat aatgctattt tacattattt gggagtttta tacaaattat ttattttgtt
     2161 ccagtgacaa aagctgttca tacagtttta tctgttcagc tgttaaatct ttaggcacgg
     2221 caaggctgat ttttacgtta aggttgccgt atccgcctga tttttgaggc aagccaagtc
     2281 cttttaaacg aagaacagca ccgcaagagg tttttggagg tattttaata tttatattgc
     2341 catgcaaagt ctggatttct ttttttgtcc ccacaacagc ttctgcggga gtaacttcta
     2401 ttgtttttgt caggtcagtg ccgtttattg tatattcttt atctgcaaat tttacaacaa
     2461 ggtacaaatc gcctttggta ccgtcagagc caagtttacc ctcacctttg agccggattt
     2521 tttggccttc ttttacttcg gcaggaattt ttacgttcaa tgtttttgaa taagtaacaa
     2581 accccgtacc gtggcactgg ctgcacattg agcctacacc agagcagttt gtacattttt
     2641 caagattatt gatttttacg ctcacaggtt tttgattaaa gatatctttt gcgctgactt
     2701 ttatttcctg tgttatatta aggtcctgtg ccggttttct gctttgagat gattgtctgg
     2761 aggttctgcc tgatcttgaa gaaaaaccgc ctcctaagtc ctcataaaaa gacgcaccgc
     2821 cccttgaaga gcgtccgccg cctgctgcga aaccgccgcc aaataagcta ttgaagaaat
     2881 cggaaaatcc accgaggtct tcaaagttta cgcctgaaga gctatactga tagccgccag
     2941 cgccaccgcc annggttaaa gttttcaaat cccggaggtg gagtataatt tgcgcctgcc
     3001 tgccagtttg caccaaggct gtcgtagcgg gaacgtttgt ctttatcgcc aagaacttca
     3061 aaagcttcgt tgatatcttt aaatttagca gaagcttcag gggttttatt aacatcgggg
     3121 tggtattttt tggcaagttt acg
//
LOCUS       DABS01000063           23716 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_1500, whole genome shotgun sequence.
ACCESSION   DABS01000063 DABS01000000
VERSION     DABS01000063.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 23716)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 23716)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23716
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..371
                     /gene="acpS"
                     /locus_tag="CPT85_02325"
     CDS             <1..371
                     /gene="acpS"
                     /locus_tag="CPT85_02325"
                     /inference="COORDINATES: protein motif:HMM:TIGR00556"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="holo-[acyl-carrier-protein] synthase"
                     /protein_id="DAB25418.1"
                     /translation="GKTKMQQVGVDIEEISRFENKTLEKDSHFLHKIYTKNELDYCFS
                     NAQPARHLAARFCAKEAVVKALSNILNKNLSYSQIEILRKENGSPYVNLIGCEENIEI
                     ALSMSHDKDKAIAFVIANKI"
     gene            complement(378..6917)
                     /locus_tag="CPT85_02330"
     CDS             complement(378..6917)
                     /locus_tag="CPT85_02330"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25419.1"
                     /translation="MNAVVSGETNVKLNNTTLKADEKVNLLSKIKRLAKTDSESLSAG
                     LTAIGVTTVKTDVKGTTSIDTSSSTITAKELTANSDSKSEAKTTLIAGNSGLASVGTT
                     TSSASVATDVSIKTGNINADKINIDLKTEKSATIEDTNKAAGFAGIGASSISTNVSGK
                     SGITTTGTIRNQANDGASTNLKMAVTDNSTAENKSKSGSYGAVGASVIDINSVVSSTV
                     NNLIGGDIWADNIKFESNLNRTSIANGLSESAGIGGISKINITSRIGGESDKTGSTTT
                     ISANIAQAKGAVDIDSNTTNNVKTYLSDNVDGLVAIAKGSAKNILNSQNNINITGAII
                     DIDGNLAIDASNLNNVAMTRSSDTNGFIAIKGGTLENTINSEANIDIQDSTLKANIVE
                     ITSKAKFASLGTIQYDDSAGGFITSSGAKIDNKITQKNNVNFKNSTLNAKKDLSIKQQ
                     SDSDFHQAVKSTHSGFAVYNRAESNLTVTNENKLDIDKNTEITANNITIAMDSSNNLS
                     SETHTEARHFAGQPKSFANLTLNANNTMNTSGKIVSKGSTNIQFLSNSINTLKQDAYL
                     YAEAAVATGDTGGSLNYNTDNKLNIEKGAIIASDKDVVVNYDKGINKFDSKVHYKKKS
                     RLLFGIPITKSDSWSSINTSHKGSLKNDGEVSAGIGSQKYMTIDKDGNIVKDSLKGFI
                     DSDYQEQEAVNKDSATVTQETLDALTSEKDYLEAKIEELNQDKNKNSEQIKIYNDQIA
                     EIDSILDSYESATKYTEDQVNNMMNNAIKDKVVGLEGPDGSSLSSSDYEAIKNLQSEK
                     VSKAEEQYKKDGNLQNYLEAVENALDKALAEYQYSYEKQVEVDGKTETQTITTNLTDS
                     QKSSIKQAVNDQQALYKEDANGVLRYGDAVVMNQETQNTLNSLNQNKESIDSMKNSLL
                     DVNSKYDSQISSINGQINDINTQYDYISKNPLPGINIAAPSIVFDSIIAEVPKIKITG
                     ITESDVTGDGTFKLYQPSLVIENYSNKNLIFSDININRGGEGGLTIGGKDFSDYLDTN
                     KKINNKVAYVTDQSNAGYQNTVTINSYFDKYNPEVYGQKPSDTIFNSTINAGKHLNIF
                     NDGGDITFANAITADKKTITATNGNIVYDAAGTNFELNSQDSVKAGKNVTVTAKNIKV
                     DGTLQAGTDERNIEITDEMLLADNLVVDPATGLKNMIKTNGNIKALYKDGKIYVFHIA
                     QEGGNVDFNGSVTGSGKVTYTNGYSTINIQNDTEKQLIVQNLANNRMNGSFDNQGTIT
                     NVVKLGKDKAETTISSNADVIIKGVVENGKGFIENDDTSVLTINANKAGSVIVENLVS
                     QTGLQQSTVDSFGILNINKENNSDGGIVVNGKITHEGDSNFVNNGNNGVLIAGVIDNS
                     NGTASIKSNNGNITVSGTVSNNNGAVNIENKNTQDSYINITSTGVVKNTSGGNISIRN
                     NGKAGLLVEGIINSLKDEIMLYSDNSDIIIGHEDTDNNILADNNNINITINNGNLLNA
                     GFDKTLINTGKDLNINITDGDIGKSTHALAGKENGFSINASTRDNTEAVNIKVDGKIT
                     ASAKNNNKTNDRLINLNAKKSGMNVNKIDSDGNVMLTAAEWPEKDENPTPDRESYFHG
                     YSIINAADDKSQPNITGKNISIIASDNAGSKDNALTYLQTQDGSISVEAENDLYIKGM
                     GSNDNIWQLITKRGNMGLDFSGDAVIRELTAGKDISIVSKGSNVTIYDLGKVSHLLDG
                     DDPLFPHDQIKFSDVVPETVHITVLDVNPETRIDPDEANSTINIYNAYVKGQNNGKPD
                     VVLKADKIIAHAYDAADSIVTNTERPNGFDPTEGRLYADDYTDKNAPQELKATGFNTV
                     GEGSSLVFDIQGVSPDDVKAAGADESSRNYKPQDVIQTVEIFNNPFGFTETVYKAKDV
                     TLSLNSSDTAPDTNRGMVLDKFYADNAYVDTKDLNLKIKDGFITNYAEFRNGDRFAVG
                     GGRPVEPGEYRWLTIVDNDYNRNISSEFGIPVTSQLYTKLTGSFALNMGNLIALETKA
                     PVVNYNPYEVVNLPRTENSFYRLTYKDDKIQKTTTTPEFSDIDKSTYKPTKRNAIRFN
                     IAQKDGYVLVSDKKKNKEKSPIISIIDISKTGLAVEHDGTLKVGDRMVLDLNIHNIKA
                     SPEVEVVRVSGTNAGMKFINLDKATANKILYMNMYSAKETEPSVSKL"
     assembly_gap    7052..7054
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(7183..12741)
                     /locus_tag="CPT85_02335"
     CDS             complement(7183..12741)
                     /locus_tag="CPT85_02335"
                     /inference="COORDINATES: protein motif:HMM:NF012206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25420.1"
                     /translation="MKNLQTNSIPLXXTLGSTIKNNLNDTAVQEAADANKGGDLAGKL
                     TDGGKLTNTENASTASNNMSAAAAGSVNVQINDSTVEAKVGNANITVGKDINVKANQK
                     TSNLNVGTGFAKASTVGAGAAVNVIENTNKTNAIIGNTDGNTETQGKANITFTGDAEH
                     NLNVTAEENNDNIQVAVGVGVASNSSDDTDTTVSAGGSFNTDILENSVKAQINNASVK
                     KTAGKDIDVNVNAKNYSTAYKGAGGLSINSGTSDSTSVGAGVAGNINLINKKTEASIN
                     ANTTIEDAKNVKVAINNDKDTPTENLISVAVGGAVITGSKSGYSFEGAIGADVINNSL
                     TAAINNSQITASENIDVIANNYLKDSNITGALAFSTTPSGVGAGLGTVVNVINTELNA
                     NITDSTIYSAEDLNVKANDKELLQFLAMNMGITTKGASTAGVNAIVNVLNSTVKANIT
                     NSDITNSGDTNVIADYDTDIKGITGVVEAAVKKGAALGGNALVNVLSSKVEAEIKNKK
                     VDSDGKVTVSAKSNEKIDVVPIGVGISGGKAAAAGNIAVNVLNNKTNAKVDSTNIHSS
                     GLSVEAEDTTTSYNRGGTLAITIGNEGAAIGGSVMVDVLNKNVNASIENSQDINTSDG
                     AILVEAKAETLFGPKDTPSISLDGLIGELDSTDLNNIDSLKDWQMTYDLGGGGNAAVS
                     GSLIAKFSDNKVTAGIKNSNIQNAGSVDVAAKNEIYTRAIVGNITGSKGAAIGGSTFI
                     NVNTGKTEALIDNSKITAADDVTVNADSIQDYKTIMAVGGGAGKVSLNGSINTNTAKD
                     TTTASIKNSSVSTEGNVNVTAQAKDDVESMNLAVSIAGKASVGGIVYNNNFNNTVNAS
                     ISGTHPDLSSNEVNIKANDITLDAKSAESFSAMMAMIGVGGNAAVSGVIVVNTIAANV
                     NSFIENAMVNSDGKINVNSAHSYNYDKYGDKTNYFTDTLMANSAGKDITSDDITTGEY
                     TPIVMVLGISGAGNAAINATDVTNVLNTNINAYVQDSQIASVDGLSINAVANEVFYDA
                     LAGVGVAGNAAVGVTTAQHILSSNVNAALKNTQVTEGNVDVTATQNTNLNTVLFMANI
                     AGSGAGVTAVAGVNTLDNNVNAKIENSTVHNGNANVKAENNTKANTMVVAASGAGVGA
                     AVNAVTITDVASGSTIASIENSTVKKGKTTVEAINRTDMNNLITGGAVAGQGAAIGAY
                     APVSTMENTVKAFIKDSHLNDNSDMSSVSALSEVLQKTIVANISAAGVGAGLGATAIV
                     NVIDNDVEAYILNTDITNGSIAINAQQHSELEGMVASVAATGVGFSGGINTAVNTLED
                     SVKAYADNVIAQNAYLDIDASENQTLNFEIAALTGSGTAGGTGAAIVNVINNALDAYL
                     QNSELTGGKADLNATLTSDIIADMSSLTAGGLAGVGAGAIVNVLTNKTNAYIQNSSAK
                     DVKSLTASAVSKENIYGNNSVIGAGWFGAAVSTLVNVIENETTAKIDAGNNNITTTGA
                     LTVNATDSLTLNNEAGSISAGKIAAGASVNVNVLNNTVTSELLSSTGKIIADSANVTA
                     DSVIDLNINTNSTAGGLAGIAGTVAVTNIGDRITSDVNVDDANVQDSVAQAQDTVNGL
                     GLADEISLTAGDSTQKQGTAAIVSADITTNNDINVKATNTVNADIYNKNITGGIVAAG
                     ATVLVTNTNYKTSASIDKDNASVSSQNGDISVIAKNNITAATEAKQGSGGLASINGNI
                     ALFKNNAQTSSEILSGTINALAGNVNXXSTDNITSIAHGEIGGGAVINVIVAQTETDN
                     KTTAQIKGKNGKKVTINAKNLEITATNTSDLKAEMMSXQEAHLLQIQLLMKLFQNQIQ
                     QRESSPLTEI"
     assembly_gap    7276..7277
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    7482..7483
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(12668..15355)
                     /locus_tag="CPT85_02340"
     CDS             complement(12668..15355)
                     /locus_tag="CPT85_02340"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25421.1"
                     /translation="MIEIGDVNDPDSIETNKATVTIHNATIAGEDVDITATSKIDYIS
                     LKGNPMVDFISGSAIGNKIQSMISGNDYDYEGARAKATIDIGSGAEIKATGDVNAKSL
                     AVANTNVKLSTKKTPVTDTTGELYYSVGTKTVSNVNVKDGASIKADGDVTLNATSKNS
                     QWIKIKNPTSIAGNIAAENGLLPTVQIIVLNSMTEADTNVNVENGAEIKAQNLDVQAV
                     NTTNDLTTLNSLATIDKENKQGIGAAIAIAIKNSDINTSAKLDTTVDTHNKGNVNVTA
                     QSMHVSSTQVTAKVDGELKGVKAQAIKKLAGSEAVKTQINNIISKLGLEGVTSLGESL
                     PNVSTALVVNNSNIDTSATIGKNANIHADNVNVQANAIDLTVNSATSHVQDSSTADYV
                     PAPGVAVIVNNQTNNTNAAVEDGDSNNHAVIKANNDFKISSTLEQPMNEATFEFILGL
                     AQTAGDLKLGLGETADAVEGAPEYIGSGEWDYELLLQALTNPAGEITGDIKDIKFNLN
                     AAGIKNTLGLKGFFNNWAESTSTVKSGGMGTAASVVVSEILNNTNAKLGNYTKVDAQN
                     VIVNAANKVTQYNAVGDVAKLWKLTDGSSGDKGGIGGSVLVESVESKANAQIGDHAEI
                     TATAVTKDGKTQGGNVSVNAANNQNFLSVVVTGSKTKSGLALSGSTVVQDVTGETTAS
                     VGKSKINASTLTVNAGEAQSTESEKTAENLFDDKNNPFSDKFEDLDDSEVTLEADLSS
                     PVINKYKDIDENTGLLSLKDSVIKDGISNILISGAIASQKDSGKEGGSSSSSGAAIGA
                     AVNVSEFSRAVNAFIADGADITLTDSLNVIADSYTQSLNIAVAGAFAGGVSMKDKGDK
                     DKNKADSWKDKANGLVEKLADKLNSSXXXPGFYNQKQLK"
     assembly_gap    12703..12707
                     /estimated_length=5
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(15479..16369)
                     /locus_tag="CPT85_02345"
     CDS             complement(15479..16369)
                     /locus_tag="CPT85_02345"
                     /inference="COORDINATES: protein motif:HMM:NF012204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25422.1"
                     /translation="MEYMILKSLITKLFNKKLTASVLGIIFLLQQTMVLSVLASDITG
                     ITKPGGEHGSFDIHPEFNKGDIGFRHYYQFNLDQGDIANLIFKMQQSGVNIEQFVNLV
                     DKTININGIINTMRDNNFYGGRAIFVSPNGMVVGASGVLNVGSLTAIAPAPNDYLRFA
                     GATMGQGVLNDAANNLGVSSVIDIPGAGSFEDNMTRIEAADQKGDINIQGKIIARNDV
                     SLKGKNIIIGQEGSINKAGIVAGVGANNITNNHGNADQILTTNKQAENLFNALVNNDV
                     VSGKGFGNENGKITIAAQSF"
     gene            16531..16791
                     /locus_tag="CPT85_02350"
     CDS             16531..16791
                     /locus_tag="CPT85_02350"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25423.1"
                     /translation="MKNNNRWKIFIVMTAVCLCISSGAVKSADLGGINAADIHPGAGG
                     FGGAINTHDMMMLKEKQRELKEREDFENFKERKEKNIKKKLS"
     gene            complement(16915..17130)
                     /locus_tag="CPT85_02355"
     CDS             complement(16915..17130)
                     /locus_tag="CPT85_02355"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25424.1"
                     /translation="MTESVSICISSSERIFEFVTPTASIKTVPSPFSCEDFSAAALIV
                     VVVSVFSIFFFEIRPLRISLVLAFYFF"
     gene            17111..18574
                     /locus_tag="CPT85_02360"
     CDS             17111..18574
                     /locus_tag="CPT85_02360"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01103.21,HMM:PF08479.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25425.1"
                     /translation="MLTDSVIGKNVTFKELQDLIENFNYLYATKGYVTARAFLPPQTI
                     ENGVVKINLVEGTVGNITVEDNRWTRESFIKKRLSAKEGEIFEIGLLEQDILKFNKYN
                     DGVKLKANLEKGESIGTTDIKLKAEEKFPFHVIGLMDNAGRKTIGELRGGLMAYADSL
                     FGYRDRLSLGAYASRHSVTPFADYNIPVNKYDGKVGFTFSSSFAQIGEGPYKMFDIKS
                     RSYNYALYYTHPLIRKPFFELTSYSAVNYKQASTSFSDVTIYTDKITSFETALNARYD
                     TKKGIWYLNQGVYQAFPIFSDVSKYFKYTGSLIRLHDFGHGIVGQFRGMYQYSPQDVI
                     PYIDQFQAGGLATVRGYSEGLLIGRSGYILSAELMFPLAPQTITLKKKTEKRKVPFVG
                     KYVKGIAFVDHAGIYPFKGEGPGAQTYHQSDYMISMGLGLRITLPGDATARLYWGSPL
                     MHNSHEGYYRNPRFHFEISLAPDFDKLLKYRKRREAL"
     gene            complement(18624..19388)
                     /locus_tag="CPT85_02365"
     CDS             complement(18624..19388)
                     /locus_tag="CPT85_02365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016196388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone oxidoreductase"
                     /protein_id="DAB25426.1"
                     /translation="MLDTLKSRIYQGQQFIKDIPNAPMREQFRGFPILKNIEGADLQK
                     CVDACPTGALKLNPLSIDMGKCTFCGACKNADQSNSIDFSNYYKLASTSREKLIITEG
                     MTPEEYEKTAVEVRKEITSVFSKSLKLRQVSAAGCNGCEMELNACSNCNFDMGRFGID
                     FVASPRHADGIVITGPISKNMAYALEDCYKSVPDPKIVVLCGTCAISGGIYQDAEEIN
                     REFLEKYSIDLYIPGCPVHPLTFINSVLSFIKDKKR"
     gene            complement(19409..20872)
                     /locus_tag="CPT85_02370"
     CDS             complement(19409..20872)
                     /locus_tag="CPT85_02370"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00329.17,HMM:PF00346.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase"
                     /protein_id="DAB25427.1"
                     /translation="MNWIRTKNNTKINLNEIPCLEIQELRKEIIHEQKRPVAFFGKDW
                     GNERVRLFVVLADDKQGELLVSSALFRSFEKSYESLTQEIPAFHIFEREFYEDFGIEP
                     LHHPWLKPLRKNQKDYPFFEMQGEEVHQVGVGPIHAGVIEPGHFRFMCNGETVYHLEI
                     MLGYQNKGVENLILKHPSNQLAESIVGDSVIAYNTAYSNIMETLKDIKISNKAQLIRK
                     LALEMERAAIHIGDMGAVAGDIAYLMGAAVFGVTRTLVINTMLEFSGSRFGRGLINVG
                     GVNFDLNKEKIERAQKTLEKVEKDVERMANTMLKNSSVMSRLEKTGTVSTERALEIGL
                     VGMAAKASGVELDTRFDFPDKWIHELNITRKPFKGVGDVLSRFKLRYKEVLESLAIVR
                     KCFKELEKYADEPVMTFSNSENAKDAFVISIVEGWRGEVVHIAMTDNTGTLTRYKIKD
                     PSFNNWYGLALAVRNNGISDFPLCNKSFNLSYSGNDL"
     assembly_gap    20968..20993
                     /estimated_length=26
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<20994..22330)
                     /locus_tag="CPT85_02375"
     CDS             complement(<20994..22330)
                     /locus_tag="CPT85_02375"
                     /inference="COORDINATES: protein motif:HMM:PF00361.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase"
                     /protein_id="DAB25428.1"
                     /translation="MNTMINTILIFPIIAGILMLLVRKRAFDNLLLNVYAIMHFIITL
                     MLTFTTKMSGASHYFAVDNTNKIFLLVLSFVFLMVTIYNNGYSKHLPSFGVQVKDTKI
                     CLYWFMVLTFVWAMTGTILSTDLGIAWVFVEATTLSSAYLIFFNRTKNAIEAAWKYVF
                     ICSIGIALAFVGIIFLNISTGNINTLNYAILYKNAAMFDPMWLKLAFVFMAFGFGAKM
                     GLAPIHFWLPDAHSEAPSPISALLSATLLNSAFLVIVRVFKIMTLANCDSYARMILML
                     MGFLSIFVTAVFVYHIKNYKRMLAYSSIENMGILAIGTALGGAAYYAVILHLIGHSLA
                     KASFFLTSGNILELFDTKRIKSVHGLMHADNKTGWLWIISFLAICAFPTSVLFISEFL
                     IIKTMIVQKHYVLCVLFALLLTIVLYGIGKVVVKMAFGQESKDKEKIVEENKK"
     gene            complement(22314..22616)
                     /locus_tag="CPT85_02380"
     CDS             complement(22314..22616)
                     /locus_tag="CPT85_02380"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25429.1"
                     /translation="MISPIYFGVSVATIVISLWLITIKHKIISNVIEFITMENGIFLL
                     SLSVAKEMPILVNLGVLLDVFIAVYILGLFVNVINKEFKDLEVSNLSDLKDYEYND"
     gene            complement(22723..22968)
                     /locus_tag="CPT85_02385"
     CDS             complement(22723..22968)
                     /locus_tag="CPT85_02385"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25430.1"
                     /translation="MENGFILLFGLSMLYLAATSRLISHIRLLIAQGVLLFLICCFGH
                     SEHTGVLNFSFLTLETLGXKSNNNPLVFIQNITQNKL"
     assembly_gap    22781..22782
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(22979..>23716)
                     /locus_tag="CPT85_02390"
     CDS             complement(22979..>23716)
                     /locus_tag="CPT85_02390"
                     /inference="COORDINATES: protein motif:HMM:PF00146.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase"
                     /protein_id="DAB25431.1"
                     /translation="VFKIAPVVAISSVLAASLFVPMATGTALINIQAGIIIFAYVLGL
                     GKFFSLISAMDTGSSFEGMGASREACFTTIVEPAFFMIIASVMALTGNFTFTSLKGIL
                     ENAGSYGILITIFAVAALFLMILIEGSRVPVDDPTTHLELTMIHEVMILDNSGSDLAL
                     LTWGNSIKMLLISSLIANILIPAHFSELVSTALYLFIIFAISVIIGTVESGMARIRMS
                     HVFEFVFIMSSFALVVLSLVVARMFGG"
BASE COUNT         6318 a         4534 c         4418 g         8406 t
ORIGIN      
        1 taggaaaaac aaaaatgcag caggttggcg tagatattga ggaaatttcc cgttttgaga
       61 acaaaacatt agaaaaagat tcccattttt tgcataaaat atacacaaaa aatgaattgg
      121 attattgttt ttctaatgca cagccggcac ggcatcttgc tgccagattt tgcgcaaaag
      181 aggctgttgt taaggcttta agtaatatac tcaacaagaa tttatcatat tctcaaatag
      241 agatattacg caaagaaaac ggatctccgt atgttaattt gattggctgc gaagaaaata
      301 tagaaatagc cctgtctatg tcacatgaca aagacaaggc cattgctttt gtaattgcaa
      361 ataaaattta atctatttta aagtttactt acagacggtt ctgtttcttt agcggaatac
      421 atgttcatat aaagaatctt gttagcagta gctttatcaa ggtttatgaa tttcataccg
      481 gcattggtac cgctaactct tacaacttca acttcagggc ttgcctttat attgtggata
      541 ttgagatcaa ggaccattct gtcaccgact tttaatgttc cgtcatgttc tacagccaag
      601 cctgttttgg aaatatctat gattgaaatt attggacttt tttctttatt tttctttttg
      661 tctgaaacca atacatagcc atctttttgt gcaatattaa atcttattgc gttacgtttt
      721 gtaggtttgt aagtagattt gtcgatatct gagaactccg gtgttgtagt tgttttttgt
      781 attttgtcat ctttgtatgt cagcctgtag aagctgtttt ctgttctagg aaggttaaca
      841 acttcatacg ggttgtaatt tacaacaggt gctttggttt ccagagcaat aaggttgccc
      901 atattcaatg caaatgagcc tgtgagtttt gtatacagtt gacttgtaac tggaatacca
      961 aattcactgg agatatttct gttgtagtca ttgtccacaa ttgtcagcca tctgtattca
     1021 cctggttcta ccggtcttcc tccgccaaca gcaaatctgt caccgtttct aaattctgca
     1081 taattagtaa tgaaaccgtc ttttattttc agattcaaat cttttgtatc aacataagca
     1141 ttgtcagcat agaatttatc aagaaccata cccctgttag tgtcaggtgc ggtgtctgaa
     1201 gaattcaaag acaacgttac atcttttgct ttgtatacag tttctgtaaa tccaaacggg
     1261 ttgttaaaga tttctactgt ttgtattaca tcttgaggtt tgtaatttct tgaagactcg
     1321 tcagctcctg ctgctttaac atcgtcagga gacactcctt gaatatcaaa tacaagactg
     1381 ctgccttcgc ctacagtatt aaaacctgtt gccttgagct cttgcggagc atttttatct
     1441 gtgtaatcgt ctgcatataa tctgccttcc gtcgggtcaa acccgttagg tctttctgta
     1501 ttagtgacta tagaatcagc agcatcatat gcgtgtgcaa ttatcttgtc ggcttttaaa
     1561 acaacgtctg gtttaccatt gttttggcct ttaacatatg cattataaat attgattgta
     1621 gagtttgcct catcagggtc aattcttgtt tccggattga catccagaac tgtaatatga
     1681 actgtttccg gcactacatc tgagaattta atttgatcat gagggaataa agggtcatct
     1741 ccgtcaagga ggtgagaaac ttttccaagg tcataaatag ttacgttaga accttttgac
     1801 acaatagaaa tgtcttttcc tgcagtgagc tctcttatta cagcatcacc tgaaaaatca
     1861 agacccatat tgccgcgttt tgtaatcaac tgccaaatat tgtcattgct tcccattcct
     1921 ttaatataaa ggtcattttc agcttcaaca ctaattgaac cgtcctgtgt ttgaagataa
     1981 gtaagagcat tatctttgct tcccgcattg tcacttgcaa tgatagaaat atttttaccg
     2041 gttatattag gttgtgattt atcatcagca gcattgatta tagaatagcc gtggaagtaa
     2101 gactctctgt caggtgttgg attttcatcc ttttccggcc attctgcggc agtaagcatt
     2161 acatttccgt cagaatctat tttgtttaca ttcattcctg atttttttgc attcaggtta
     2221 atcaatctat cgtttgtttt gttgttattt tttgcactgg ctgtaatttt tccatcaact
     2281 tttatattaa cagcctctgt gttgtctctt gttgaggcat taatggagaa tccgttctct
     2341 ttaccagcga gtgcgtgtgt tgattttcca atatcgccgt cagtgatatt gatattcaga
     2401 tctttgcctg tgttgataag tgttttatca aaacccgcat ttaataaatt tccgttgttt
     2461 attgtgatat ttatattgtt gttgtccgca agaatattgt tgtcagtatc ttcatgcccg
     2521 atgataatgt ctgaattatc agagtagagc atgatttcat ctttcaatga attgataata
     2581 ccttccacta ataatcctgc tttaccgttg tttcttatac tgatattgcc gcctgatgtg
     2641 tttttaacaa cacctgtgct ggtaatattt atgtaagaat cttgcgtgtt tttgttttct
     2701 atattaactg caccgttatt atttgataca gtaccggaga cagtaatatt gccattgttg
     2761 gatttaatgg atgctgtgcc gtttgagttg tcaataacac ctgctataag cacaccgttg
     2821 tttccgttgt taacaaaatt agaatctcct tcatgggtaa ttttgccgtt aacaactatg
     2881 cctccgtcag aattgttttc tttgtttatg ttcaatattc cgaaagagtc tacagttgat
     2941 tgttgcaatc ctgtttggct tacaaggttt tctacaatta cactgcctgc tttgttggca
     3001 tttattgtca aaacgctggt atcgtcgttt tcaataaacc ctttaccgtt ttcaacaacg
     3061 cctttaataa tcacatctgc attagatgat atagttgttt cagccttgtc tttgccaagt
     3121 ttcacaacat ttgttattgt tccttgattg tcaaatgaac cgttcattct gttgtttgca
     3181 aggttttgta ctatcagctg tttttcagtg tcattttgta tgttgattgt tgaataaccg
     3241 tttgtataag taactttacc tgaacctgtc actgatccgt taaagtcaac atttccgcct
     3301 tcttgtgcaa tatggaaaac ataaattttt ccgtctttgt agagagcttt tatattgccg
     3361 tttgttttaa tcatattttt cagacctgtt gcggggtcga caacaagatt atctgcaagg
     3421 agcatttcat cggtgatttc aatgttcctt tcatctgttc cagcctgtaa tgttccgtca
     3481 actttaatgt ttttggctgt aaccgtaaca tttttgccag ctttaacaga atcctggctg
     3541 ttaagctcaa agtttgtacc tgcagcatca tacacaatat tgccgttagt tgcagttatt
     3601 gtctttttgt ctgctgtaat tgcattggca aaggttatat cacctccgtc attgaaaatg
     3661 ttgaggtgtt ttccagcatt gatagtgctg ttgaatattg tgtcagaagg cttttggccg
     3721 tatacttcag ggttgtattt gtcaaaatag ctgttaatcg ttacagtatt ttgataaccc
     3781 gcgttgcttt ggtctgtaac ataagcaact ttgttgttaa tttttttgtt tgtgtcaagg
     3841 tagtcgctaa agtcttttcc tcctatagta agaccgcctt ctccgcctct attgatatta
     3901 atgtcggaga atataagatt tttatttgag taattttcta taacaaggct tggttgatat
     3961 agcttgaatg tgccatcacc tgttacatca ctttcagtaa taccggtaat tttgattttg
     4021 ggtacttctg caataatact gtcaaatact attgaaggag ccgcaatatt tattcccgga
     4081 agcggatttt ttgatatata gtcatattga gtgttgatat cattaatttg gccgtttatt
     4141 gatgatattt gtgagtcata tttggaatta acatcaagca ggctgttttt catagaatca
     4201 atagattctt tgttctgatt caacgagtta agagtgtttt gtgtttcctg attcattaca
     4261 acagcatcac catatctcaa gactccgtta gcatcttctt tgtataatgc ttgctgatca
     4321 ttaacagcct gtttgataga agatttttga gagtcagtta aatttgttgt aattgtttga
     4381 gtttctgttt ttccatcaac ttccacttgt ttttcgtaag aatattgata ttctgcaaga
     4441 gccttatcaa gagcgttctc tacagcttcc agataattct gaagatttcc gtctttttta
     4501 tattgttctt cggctttgct tactttttcg ctttgaaggt tttttatggc ctcataatct
     4561 gaactgctta gacttgagcc gtcaggacct tcaagcccga ccactttgtc tttaattgca
     4621 ttgttcatca tattgttgac ctggtcttct gtatattttg ttgcagattc ataagaatcc
     4681 aatatagagt cgatttctgc tatctggtca ttgtatattt ttatttgttc cgaattttta
     4741 tttttgtctt gatttagctc ttctattttt gcttcaagat aatctttttc acttgttaaa
     4801 gcgtcaagcg tttcctgtgt aacggttgca gagtctttgt taacagcctc ttgttcctga
     4861 taatcgctgt caataaaacc ttttaaggag tctttgacta tgttgccgtc tttgtctata
     4921 gtcatatatt tttgagagcc aatgcctgct gacacttctc cgtcattttt caatgaacct
     4981 ttgtgactag tatttatgct tgaccagctg tctgattttg ttatcggaat accgaaaaga
     5041 agtctgcttt tctttttgta atgtactttt gagtcgaatt tatttatacc tttgtcataa
     5101 tttactacaa catctttgtc agatgctatt attgcacctt tttcaatgtt cagtttgttg
     5161 tcagtattat aattgaggct tcctcctgta tcacctgttg ccacagctgc ttcggcatac
     5221 aagtatgcgt cttgcttgag ggtgttgatt gaatttgaaa ggaattgaat atttgtgctt
     5281 cctttagata caattttacc tgaggtattc attgtgttgt ttgcattcaa agtaaggttt
     5341 gcaaatgatt ttggctgtcc ggcaaagtgt cttgcttctg tatgagtttc tgaagacagg
     5401 ttgttgctgg aatccattgc aatagttata ttatttgcag ttatttctgt atttttatca
     5461 atatccagtt tgttttcgtt tgtcacagtc agatttgatt cagccctgtt gtacacagca
     5521 aaaccactgt gtgttgattt tacggcctga tggaaatcag agtcggactg ctgttttatg
     5581 ctcaagtctt ttttggcatt aagagttgaa tttttaaagt ttacgttgtt tttttgtgta
     5641 attttgttgt caatttttgc acctgagctg gtaatgaaac cacctgcact atcgtcatat
     5701 tggattgttc ccaaagaagc aaatttagct ttggaggtaa tttctacaat atttgctttt
     5761 aacgtagagt cttgtatgtc tatgtttgct tcagagttga ttgtgttttc aagcgttccg
     5821 cctttaattg caataaatcc gttggtgtca gaacttcttg tcatagcaac attgttcaga
     5881 tttgatgcat ctattgccag attgccgtca atatcaataa tcgctcctgt tatgttgata
     5941 ttgttttgag agtttaagat gttttttgca gagccttttg ctattgcaac aagaccgtca
     6001 acattgtcag aaaggtatgt ttttacgtta ttggttgtgt ttgagtcaat gtcaacagca
     6061 ccttttgcct gagcgatatt ggcgcttatt gttgttgtgg agcctgtttt atcggattct
     6121 ccgccaattc tgctagttat gttgattttg ctgattccgc caataccggc tgattcagag
     6181 aggccgttgg ctatggatgt tctgttaaga ttgctttcaa atttaatatt atcagcccat
     6241 atatctccgc ctatgagatt gtttacggta gacgatacaa cactgttaat gtcgataaca
     6301 gaagcaccta ctgctccgta actgcctgat tttgatttgt tttcggctgt agagttatct
     6361 gtaactgcca tttttaggtt tgttgacgca ccatcatttg cctggtttct tattgtaccg
     6421 gtggttgtaa tacctgattt accgcttaca tttgtagaaa ttgagcttgc tccaatacct
     6481 gcaaaaccgg cagctttgtt tgtatcttca attgtggcac ttttctctgt ttttaaatca
     6541 atatttatct tgtctgcatt tatattgcct gtttttattg aaacatcagt tgccactgaa
     6601 gcagaggaag ttgttgtgcc tacgcttgca aggcctgagt tgcctgcaat aagtgttgtt
     6661 ttggcttcac ttttgctgtc tgaatttgca gtaagctctt ttgctgtgat tgttgaagag
     6721 cttgtgtcaa ttgaagttgt tccttttaca tctgttttta ctgttgttac accaatggct
     6781 gtaaggccgg cgctaaggct ttcagagtct gttttagcaa gtctttttat tttggaaaga
     6841 agattgacct tttcatctgc tttcagtgtt gtattattta atttaacatt ggtttctccg
     6901 cttacaacag cattcatatt tgtgccattg ccgccaacaa gctggcctga acgatttacg
     6961 gaagttacat ttgcagtgag ttctcctgct tcattcgaat ttttctttgt acctgctttt
     7021 attgttgcgt ttttagtttt gatatttgca gnnntttaga ttcaatagtt gcattttgat
     7081 ctgttactgc tgcaccaact gccgctatag agccaacaat aacattgtca ttaaccctga
     7141 tatggtctgt ttgtgctgct attgttaaat ctcctgttaa tgttatatct ccgttagggg
     7201 tgaagattcc cgctgttgta tctgattttg aaacagcttc attaataact gtatttgcaa
     7261 caaatgcgcc tcctgnnttg acatcatttc tgcttttaag tcacttgtgt tagtagctgt
     7321 aatttcaagg tttttagcat ttattgttac ttttttaccg tttttacctt ttatttgtgc
     7381 agttgttttg ttgtctgttt ctgtttgtgc cactataacg tttattacag caccaccgcc
     7441 gatttctccg tgagcaattg atgtaatatt atctgtggat tnnatattta catttcctgc
     7501 aagtgcgttg attgtaccgg agagtatttc tgaagaagtt tgggcattgt ttttaaacag
     7561 tgctatgttt ccgttgattg atgcaagacc gccggaacct tgtttggctt ctgttgcggc
     7621 agttatattg ttttttgcaa tgactgatat atccccgttt tgagaagaaa cagatgcgtt
     7681 atctttgtct attgaggcag atgttttgta gtttgtgttt gtaacaagta ctgttgcacc
     7741 tgcagctaca attccgcctg tgatattttt gttataaata tctgcattta ctgtatttgt
     7801 tgcttttaca ttaatgtcgt tgtttgttgt aatatccgct gaaacaatag ctgctgtgcc
     7861 ttgtttttgt gtgctatctc cggctgtaag acttatttca tcggcgaggc cgagtccgtt
     7921 tactgtatct tgagcctgtg caacagagtc ttgcacattt gcgtcatcca catttacatc
     7981 tgatgtaatt ctgtcaccta tatttgtaac ggcaacagta cctgcaatac ctgccaagcc
     8041 gccagctgtg gagtttgtat tgatatttaa atctattaca gagtcagcag ttacgtttgc
     8101 ggaatctgca atgatttttc ctgtgctgct taacaattca gaggttactg tattgtttaa
     8161 gacattaacg tttacagaag cacctgctgc aattttacca gcagatatag aacctgcttc
     8221 attattcaat gtaagtgaat cagtggcgtt gacagttaat gctcctgttg ttgttatgtt
     8281 gttatttcct gcatctattt ttgcagttgt ttcattttcg attacattaa ctagtgtgct
     8341 tactgctgcg ccgaaccagc ctgcaccaat cacactgtta ttgccataaa tattttcttt
     8401 tgaaacagct gaagctgtta gtgattttac atcttttgct gaagagtttt gaatgtatgc
     8461 attggttttg tttgttaaaa cattaactat cgcacctgct cctacaccgg caagccctcc
     8521 tgctgtgagg ctgctcatat ctgctataat atcagaggtc aaagttgcgt ttaaatcagc
     8581 cttaccgcca gttaattcac tgttttgtaa atatgcatca agtgcattat taattacatt
     8641 aacaattgct gcacctgttc ctcctgctgt accggaacct gtaagtgctg caatttcaaa
     8701 gttaagagtc tggttttccg atgcatctat atccagataa gcattttggg caatgacatt
     8761 atccgcatat gctttaacac tgtcttccaa tgtgttaaca gctgtattta ttccaccgga
     8821 gaagcctact cctgtagctg ctacagaagc aaccattcct tcaagttcgg aatgttgttg
     8881 tgcattaata gcaatactgc cattagtaat atctgtattt aggatgtatg cttctacatc
     8941 gttgtcaata acatttacta ttgctgttgc gcctaatccc gcacccactc cggcggcaga
     9001 gatgtttgca acaatggttt tttgcaatac ttctgataac gcacttacac tgctcatatc
     9061 agaattgtca ttaagatgag agtctttgat aaatgctttt acagtatttt ccatagtgct
     9121 gacaggtgca taagctccta ttgccgcacc ctggcctgca actgctccgc ctgtaatcag
     9181 gttgttcata tctgttctgt ttatagcttc aacagttgtt ttgccttttt taaccgttga
     9241 gttttcaatt gaagcaattg tagagccgga tgccacatct gttattgtca ctgcatttac
     9301 tgctgctcct acacctgctc cgcttgctgc aaccaccatt gtattggctt ttgtattgtt
     9361 ttctgcttta acgtttgcgt taccgttatg tacagtgctg ttttcaattt ttgcatttac
     9421 attgttatca agtgtattca caccggctac tgctgtaaca cctgctcctg agccggcaat
     9481 atttgccata aaaaggacag tatttaaatt ggtgttttga gtagcagtta catcaacatt
     9541 tccttctgtg acctgtgtat ttttcagtgc tgcatttaca ttactggaga gtatatgctg
     9601 tgctgttgtt actcccactg ccgcattgcc ggcaacacct acacctgcaa gtgcatcata
     9661 aaatacttca tttgcaaccg cattgatgct taagccgtca acgcttgcaa tttgtgaatc
     9721 ttgtacatat gcatttatat ttgtatttaa tacatttgtg acatctgttg catttattgc
     9781 ggcattacct gcgccggaaa tgccaagcac cattacgata ggtgtgtatt cacctgttgt
     9841 tatatcgtct gatgtaatat cttttccggc actgtttgcc attaatgtgt ctgtaaaata
     9901 gtttgtttta tcgccatatt tatcataatt gtaactgtga gcagaattta cattgatttt
     9961 gccgtcggaa ttaaccatcg cattttcaat gaaagaattt acatttgctg caattgtgtt
    10021 tactacaatg actccgctga cagcagcatt gccgccaacg cctatcattg ccatcattgc
    10081 agagaatgat tcagcagatt ttgcatcgag tgttatatca tttgctttta tattcacttc
    10141 attagaggat aaatcagggt gtgtgcctga aatgcttgca tttacagtat tattaaagtt
    10201 gttgttatat acaatgccgc caacagatgc tttgcctgca atactaacag ccagattcat
    10261 actttcaaca tcatcttttg cttgtgcagt gacgttgaca ttgccttctg ttgatactga
    10321 ggagttttta atggaggctg ttgttgtatc ttttgcggta tttgtgttga tagaaccgtt
    10381 aagagatact ttgcctgcac ctccgccaac agccattatt gttttgtaat cctgaataga
    10441 gtctgcatta acagtaacat cgtcagctgc tgttattttt gaattgtcaa ttaacgcttc
    10501 tgtttttcct gtatttacat tgatgaatgt tgaaccgcct attgcagcac cttttgaacc
    10561 ggttatgttg ccgacaattg ctcttgtgta aatttcattt tttgctgcaa catcaacact
    10621 gcctgcattt tgtatgttgg aattttttat acctgcagtt accttattgt cagagaattt
    10681 agcaatcaaa gaaccgctga cagcagcatt gcctcctcct ccaaggtcat aagtcatttg
    10741 ccagtctttt aagctgtcta tattgtttaa atcagtgctg tcgagctctc caattagtcc
    10801 gtcaagcgag atagacggtg tatctttggg gccgaacaag gtttcagcct ttgcctctac
    10861 aagtattgcg ccgtcagagg tattaatatc ctgtgaattt tcgatggatg cgtttacatt
    10921 tttatttaat acatccacca ttacagaacc accgatagct gcgccttcgt tgcctattgt
    10981 aatagcaaga gtaccgcctc tgttgtagga ggttgttgta tcttctgctt ctacactaag
    11041 acctgatgaa tgaatatttg tagagtcaac ttttgcattt gttttgttgt ttaaaacatt
    11101 aaccgcaatg ttgcctgctg ctgcagcttt tcctccggaa atacctacac ctattggtac
    11161 aacatcaatt ttttcgttag attttgcgct gactgttacc tttccgtcag agtctacttt
    11221 tttgtttttg atttctgctt cgactttgct ggaaagtaca ttaacaagtg cattgccgcc
    11281 aagagctgct ccttttttca cagcagcttc cacaacacct gtgattcctt ttatatctgt
    11341 atcataatca gcgattacgt ttgtgtcacc ggagtttgtg atatcagaat ttgttatatt
    11401 agcttttact gtactgttga gtacatttac aattgcattg actcctgctg tagaagctcc
    11461 ttttgtggta attcccatat tcattgccaa aaattggagc aattctttat cattggcttt
    11521 tacattcagg tcttctgcac tatatattgt agagtctgta atattggcat ttaactcggt
    11581 atttattaca tttacaacag taccaagccc cgcaccaacg cctgacggag tggtggagaa
    11641 tgccagagcg cctgtaatat tactgtcttt aagatagttg ttcgcaataa catcaatatt
    11701 ttcgcttgct gttatttggg agttgttaat tgcagctgtt aaactgttat tgattacatc
    11761 tgcaccaatt gcaccttcaa aggaatagcc tgattttgaa cctgtaataa cagcaccccc
    11821 tacggcgaca gatataaggt tttcagtggg tgtatctttg tcattgttga ttgcaacttt
    11881 tacatttttt gcatcttcaa ttgttgtgtt tgcattaatt gatgcttctg tttttttgtt
    11941 tataaggttt atgttgcctg caactccggc acctacggat gtggaatctg atgttccgct
    12001 gtttattgat aatccaccgg cacctttgta tgctgttgaa taatttttag cattaacatt
    12061 tacatctata tctttgcccg ctgtcttttt gacagaagca ttgttgattt gcgctttgac
    12121 actgttttcc agtatgtcag tgttaaaaga accgcctgct gaaacagttg tgtctgtgtc
    12181 atcagaagag tttgacgcta caccgacacc aacagctacc tgaatattat cattattttc
    12241 ttctgctgtt acattaaggt tgtgctctgc atcacctgtg aaagtgatat tggctttgcc
    12301 ctgtgtttct gtgtttccgt ctgtatttcc gattatggcg tttgtcttat ttgtattttc
    12361 aataacatta accgcagctc cggcacctac ggtgcttgct tttgcaaaac ctgtgccgac
    12421 atttaagttg cttgttttct ggttggcttt gacatttata tctttgccta ctgtgatatt
    12481 tgcattgcct acttttgctt ctacagtgct gtcattaatt tgaacgttta cagaacctgc
    12541 agctgcagca gacatattgt ttgacgctgt ggaagcattt tctgtgttgg taagttttcc
    12601 tccatctgtc agtttgcctg caaggtctcc gcctttgttt gcgtcagcag cttcttgtac
    12661 tgcagtgtca tttaagttgt ttttgattgt agaacccagg gtnnnnntca gaggaattga
    12721 gtttgtctgc aagtttttca acaagcccgt ttgctttgtc tttccaggag tctgctttgt
    12781 ttttatcttt gtcgcctttg tctttcattg aaacgcctcc ggcaaaagca ccggctactg
    12841 caatgttgag actttgcgta taagaatctg caattacatt taatgaatct gttaatgtaa
    12901 tatcagcacc gtctgcaata aatgcattta ctgctcttga aaactcactt acattaactg
    12961 ccgcaccaat agctgcgccg gaagaagagc tgctacctcc ttctttaccg gaatcttttt
    13021 gtgatgcaat tgcacccgag ataagtatgt ttgatattcc gtcttttatt acagagtctt
    13081 ttaaagataa aagtcctgtg ttttcatcaa tatctttgta tttgttaata acaggagagc
    13141 tcaagtctgc ttcgagtgta acttcagaat catcaaggtc ttcaaatttg tcggaaaacg
    13201 gattgttttt atcatcaaac aggttttctg ctgttttttc agattctgtg gattgtgctt
    13261 ctcctgcatt tactgtcaat gtactcgcat taatttttga ttttccgaca gatgctgtgg
    13321 tttctcctgt cacatcctgc acaacggtgc tgccggaaag tgcaagaccg ctttttgtct
    13381 tgcttcctgt cactactaca gataagaaat tctggttgtt agccgcattt acacttacat
    13441 ttccgccttg tgtcttgccg tcttttgtta cggctgttgc tgtaatttct gcatgatcac
    13501 ctatttgcgc atttgctttg ctttcaacag actccacaag tacactgccg ccaatgccgc
    13561 ctttgtctcc tgaagaaccg tctgtgagtt tccataattt agctacatca cctacagcat
    13621 tgtattgtgt aactttattt gcagcgttga ctattacgtt ttgtgcgtca acctttgtat
    13681 aatttccgag ttttgcattt gtgttattaa gaatctctga tacaacaaca cttgctgcag
    13741 tgcccatacc gcctgatttt acagtggaag ttgattctgc ccagttgtta aaaaagcctt
    13801 ttaaaccgag tgtatttttt atccctgcag catttaagtt aaatttaata tccttaatat
    13861 cacctgtgat ttcgccggcg gggtttgtca gagcctgcaa aagaagctca taatcccact
    13921 ctccgcttcc aatatattca ggtgctcctt caacagcatc tgctgtttca ccaaggccaa
    13981 gttttaaatc accggctgtt tgtgcaagac caaggataaa ctcaaatgta gcttcattca
    14041 tcggctgctc aagagtagag ctgattttaa aatcattgtt tgccttgatt actgcgtgat
    14101 tgttgctgtc accatcttct acagctgcat ttgtattatt tgtctgattg tttacaatta
    14161 ctgccacacc cggggctggc acataatcgg cagtggaaga atcttgtacg tgagaagttg
    14221 cactgttaac agtcaggtct attgcattgg cctgtacatt aacgttatct gcgtgaatat
    14281 tggcattttt gccgatagtg gcagatgtat caatattgct gttatttaca acaagtgctg
    14341 tgctgacatt tggaagtgat tcgccaagag atgttacacc ctccaatccc aacttgctga
    14401 taatattatt aatctgtgtt tttacagctt ctgaacccgc aagttttttg attgcttgag
    14461 cttttacacc ttttaactct ccatcaactt ttgctgtcac ctgtgtggaa gaaacatgca
    14521 tgctttgcgc tgtaacattc acgttgcctt tattgtgtgt gtcaactgtt gtgtcaagtt
    14581 ttgcggatgt attaatatct gaatttttta tggcaattgc aatcgctgca ccaatgccct
    14641 gtttgttttc tttgtctatt gttgcaagag aattgagtgt tgttaaatca tttgttgtat
    14701 taacggcctg tacatcaagg ttttgcgctt ttatctcggc accgttttca acatttacat
    14761 ttgtatctgc ttctgtcata gaatttagta caataatctg cactgtgggc aaaagtccgt
    14821 tttctgccgc tatattgcct gcaatagatg tagggttttt aatcttaatc cactgtgagt
    14881 ttttggatgt tgcatttaga gtgacatctc cgtctgcttt aatgcttgca ccatctttga
    14941 catttacgtt tgatactgtt tttgtgccca cagaatagta caattctcct gtagtgtctg
    15001 taacaggtgt cttttttgtt gaaagtttta cgtttgtgtt tgcaacggca agagattttg
    15061 cattaacatc tccagttgct tttatttcgg ctccgctgcc aatatcaatt gttgctttag
    15121 ctcttgcacc ttcatagtca tagtcgttac cgctaatcat agattgaatt ttgtttccta
    15181 ttgcagaacc ggaaataaaa tcaaccatcg gattgccttt taatgagatg taatcaattt
    15241 tgctcgttgc tgtaatatca acatcttcgc cagctattgt tgcattgtgg attgtgacag
    15301 ttgctttgtt tgtttcaata ctgtcagggt cgttgacatc accaatttct atcaaatagt
    15361 cattaattgc gttttgtatt gcttctgctt cgtctatgcc ttgttctttc gcttcctgta
    15421 caatggtttc aataagcttg tccccgattt tgtctgctac agtgactaca gagttttctc
    15481 agaaagattg agccgcgata gttattttcc cgttttcgtt accaaaaccc ttaccgctta
    15541 caacatcatt gttaacaagt gcattaaaaa gattttctgc ctgtttattt gttgttaaaa
    15601 tctggtctgc attaccatgg ttgttggtaa tgttgttcgc gccaactccg gctacaatgc
    15661 ctgctttatt tatagatcct tcctggccaa tgattatatt tttacctttg aggcttacat
    15721 catttcttgc aatgatttta ccctgaatat taatatcacc tttttggtct gcagcttcaa
    15781 ttcttgtcat attgtcttca aaagagcctg cgcccgggat atctattaca gaactaactc
    15841 cgaggttgtt tgcggcatca tttaataccc cttgccccat tgttgctccg gcaaaacgta
    15901 aataatcatt aggggcaggt gcaattgccg tcaacgagcc aacattgagt acaccggaag
    15961 cgcctacaac cattccgtta ggagaaacaa aaattgcgcg tcccccgtaa aaattgttgt
    16021 cgcgcatggt attgataata ccgttaatat taatagtttt atcaacaagg tttacaaatt
    16081 gttcaatatt aacacctgat tgctgcattt taaaaattag gttggcaatg tcgccttgat
    16141 ccaaattgaa ttggtaataa tgacgaaaac ctatgtcacc tttgttaaat tcgggatgga
    16201 tatcaaaaga gccgtgttca ccgccgggtt ttgtaatacc tgtgatatct gacgccaata
    16261 cagataaaac cattgtttgt tgaagcaaaa atattatccc caatacagat gcagtcagtt
    16321 ttttgttgaa aagctttgtt ataagtgatt ttagaatcat atattccatc ccattcttaa
    16381 atatttcctc attctaaata aaatcgtttg gcttttcacg gatatataaa tttttgtcac
    16441 gatttgttta cgaaaattaa cttttgatac aaaaaaaaaa taattactgt aaaaataaat
    16501 gttaggaatt aaaattcgga aaaagatttg atgaaaaata ataacagatg gaagattttt
    16561 attgttatga cggcagtttg cctttgtatt tcttccggtg ctgttaaatc tgcagacctt
    16621 ggcggtatca atgccgcgga tattcatccc ggtgccggcg ggtttggcgg agctatcaac
    16681 actcacgata tgatgatgct caaagaaaaa caacgtgagc taaaagaacg tgaagacttt
    16741 gaaaatttta aggaaagaaa agaaaaaaac ataaaaaaga aactgtcata gaggactata
    16801 caggttcggg cgaaaaaata tacaacactg aaacctctgc aaaaattaaa gagcagcacg
    16861 aaaaacttat agaagaaaat caaaagaaaa agtcatcaaa gtttaaatct tttttcaaaa
    16921 aaaataaaaa gcaagaacaa gacttatccg aagaggacga atctcaaaaa aaaatataga
    16981 aaagacggat acaactacta ctattaaagc ggcagccgag aaatcctcac aggaaaacgg
    17041 tgaagggact gtttttattg aagctgtcgg agtaacaaat tcaaaaattc tttctgatga
    17101 agaaatacaa atgcttacag attctgtcat cggaaaaaat gttacattta aagagcttca
    17161 agaccttata gaaaatttta actacctgta tgcaacaaag ggttatgtta cggcacgtgc
    17221 atttttgcct cctcaaacga ttgaaaacgg ggttgtaaag ataaatcttg tagaaggcac
    17281 agttggaaat ataactgtag aagataacag atggacaaga gaaagtttta ttaaaaaaag
    17341 actttctgca aaagaaggtg aaatttttga aataggtttg ctggagcagg atattttaaa
    17401 gtttaataaa tataatgacg gggtcaagct caaggccaat cttgaaaaag gcgagagcat
    17461 cgggactacg gatataaaac ttaaagcgga agaaaaattt ccgtttcatg taataggcct
    17521 tatggataac gctggtagaa aaacaattgg cgaattaaga ggcggactta tggcgtatgc
    17581 cgacagcctt tttggataca gagacaggct gtcgctcggt gcttatgcaa gcagacattc
    17641 tgttacgccg tttgctgatt ataatatacc ggttaacaaa tatgacggta aagtcggttt
    17701 tactttttca tcaagctttg cgcagattgg agaaggccct tacaaaatgt ttgatatcaa
    17761 gagccgttct tacaactatg ctttgtatta tacgcatcca ttgataagaa aaccgttttt
    17821 tgagttaaca agctattctg cagtcaacta caaacaggca tccacttctt ttagcgatgt
    17881 gactatttat actgataaaa ttaccagttt tgaaacagca ttgaatgcaa gatatgatac
    17941 gaaaaaaggt atctggtatc ttaatcaggg tgtttatcag gcgtttccta tttttagcga
    18001 tgtatcaaaa tattttaaat acacaggaag tttaattagg ctgcatgatt tcggacacgg
    18061 tattgtaggg cagtttaggg ggatgtatca atattctccg caggatgtaa ttccatatat
    18121 tgaccagttt caagcaggtg gtcttgccac tgtgagagga tattccgagg gtcttttgat
    18181 tggccgttcc ggttatattc ttagtgccga attaatgttc ccgcttgctc cgcagacaat
    18241 tactcttaaa aagaaaactg aaaaaagaaa ggtgcctttt gtaggaaaat acgtaaaagg
    18301 tattgctttt gtcgaccatg caggtattta tccttttaaa ggtgagggac ccggggcaca
    18361 aacctatcat caaagtgact atatgataag catgggcttg ggtttgagaa taactcttcc
    18421 aggcgatgct acggcaagac tatactgggg cagtcctttg atgcataact cacatgaagg
    18481 ctattacaga aaccccagat tccattttga aatttcactg gcacctgact ttgataaatt
    18541 actcaaatat agaaaaagaa gagaagcgct ttaattatta aaacttaaaa cgcttctgtt
    18601 tattgatgtt tgcttactta tttttatctt tttttgtctt ttataaagct caatacagag
    18661 tttataaatg tcaaaggatg tacagggcat cccggtatat ataaatctat ggaatatttt
    18721 tctaaaaact ctctgttgat ttcttctgcg tcttgataaa ttccgccgga aattgcacat
    18781 gttccgcaaa ggacaacaat ttttggatcg ggaacagatt tgtagcagtc ttcaagagcg
    18841 tatgccatgt tttttgaaat cgggcctgtt ataacaatcc cgtcagcgtg ccgcggggat
    18901 gcaacaaaat ctataccgaa tcttcccata tcaaagttgc agttagagca agcattgagc
    18961 tccatttcgc agccattgca gcctgctgct gacacctgtc ttaatttcag ggattttgaa
    19021 aacacggagg taatctcttt tcttacttcc actgctgttt tttcgtattc ttcaggtgtc
    19081 attccttctg taattatcaa tttttcacgg cttgttgagg caagcttgta atagtttgaa
    19141 aaatcaattg aattgctttg gtcggcattt ttgcaagctc cgcaaaaagt gcatttgccc
    19201 atgtcaattg aaagcgggtt gagtttgagt gcacccgtag ggcaagcgtc aacgcatttt
    19261 tgaagatcag cgccttcaat attttttaat atcgggaaac ctctaaactg ctctctcatg
    19321 ggagcattcg ggatgtcttt aataaactgt tgtccctgat aaattcttga ttttaatgta
    19381 tctagcataa ttatattttc cttgtgtatt ataaatcatt tcctgaatat gacagattaa
    19441 agcttttgtt gcatagcgga aaatctgata ttccgttgtt tcttaccgca agagcaagcc
    19501 cgtaccagtt gttgaatgaa gggtctttga ttttatagcg tgtaagagtg cctgtgttgt
    19561 ctgtcattgc aatgtgtaca acctcgcctc tccagccttc cacaattgaa atgacgaatg
    19621 cgtcttttgc attttcactg tttgagaaag tcataaccgg ttcatcagcg tatttttcca
    19681 gctctttaaa gcattttctc actattgcaa gagattccaa gacctctttg tatctcaatt
    19741 tgaatcttga taatacgtct cccacgcctt taaacggctt tctcgtaatg tttaattcat
    19801 gtatccattt gtcagggaaa tcaaaacgtg tatcaagctc aacccctgaa gccttggcag
    19861 ccattcctac aagcccgatt tcaagagcac gttctgtgct tacagtgcca gttttttcca
    19921 atcttgacat aacagaggaa tttttgagca ttgtatttgc cattctttca acatcttttt
    19981 caactttttc aagagttttt tgagctcttt caattttttc tttattaagg tcaaaattga
    20041 cccctcctac attgatgagc cctctgccga atctgcttcc tgaaaactcc agcattgtgt
    20101 ttataacaag agttcttgta acgccaaata ccgcagcacc cattagatat gcaatatctc
    20161 ccgcaacagc gcccatatca ccgatatgaa tagctgctct ttccatctca agtgcgagct
    20221 ttcttattaa ctgtgctttg tttgatattt ttatatcttt taaggtttcc ataatgttgg
    20281 aataagctgt gttgtaggct attacgctgt cacccacaat ggattccgcc agctggtttg
    20341 aaggatgttt aagaatgaga ttttccacac ctttattttg ataaccgagc ataatctcga
    20401 ggtggtaaac agtttcgccg ttgcacataa atctgaaatg tcccggctct ataaccccag
    20461 cgtggatcgg gccaacgcct acctggtgga cttcttcacc ttgcatttca aagaagggat
    20521 aatctttctg gtttttgcgc aaaggcttta accagggatg gtgtaacggt tctatgccga
    20581 agtcttcata aaattctctt tcaaaaatat gaaaagcggg aatctcttgt gtaagtgatt
    20641 cataagactt ttcaaaactt ctaaaaagag cagaagacac aagaagttcg ccctgtttgt
    20701 cgtcagcaag cacaacaaac aatcttactc tttcattacc ccagtctttg ccaaagaatg
    20761 caacgggtcg tttttgttcg tgtattattt cttttctcaa ctcctgtatt tcaaggcagg
    20821 gtatttcatt taaatttatt tttgtattat tttttgttct aatccagttc attatattgt
    20881 ccttttgatt ttaaaatcct gctgcagcca gtgttattac tctgttaagc accggcggca
    20941 cgtaaacgcc gagaataaat actatcannn nnnnnnnnnn nnnnnnnnnn nnnttctttt
    21001 tgttttcttc cactattttt tctttgtctt tactttcctg accaaacgcc attttaacaa
    21061 caaccttgcc aataccgtaa agtactattg ttaatagcag tgcaaacaaa acgcacagca
    21121 cataatgctt ttgtacaatc attgttttga ttatcaaaaa ttcactgata aacaatactg
    21181 atgtcggaaa tgcgcaaatt gctaagaatg aaattatcca caaccatcct gttttgttgt
    21241 ctgcgtgcat taatccgtga acggatttta ttctctttgt gtcaaaaagt tccaatatat
    21301 ttcctgatgt aaggaaaaag gaagcttttg caagagagtg accgattaaa tgtagaataa
    21361 cagcataata tgcggccccg ccaagagctg ttcctattgc aagaataccc atattttcaa
    21421 ttgatgaata agccagcatt cttttgtaat tttttatgtg ataaacaaaa actgctgtga
    21481 caaagatgga taaaaagccc ataagcatta atatcattct tgcgtaagaa tcacagtttg
    21541 caagtgtcat tattttgaac actctgacaa tcacgagaaa agcagagttc aataaagtag
    21601 ctgacaacaa tgctgaaata ggagacgggg cttctgagtg agcatcaggc agccagaaat
    21661 gaattggtgc cagacccatc tttgcaccaa aaccaaatgc cataaataca aatgcaagtt
    21721 taagccacat cgggtcaaac atagcagcat ttttatacaa aatagcatag tttaatgtgt
    21781 ttatatttcc tgttgatatg ttcaggaaaa ttatgcccac aaacgctaac gcaataccta
    21841 ttgaacagat aaagacatat ttccatgctg cttctattgc attttttgtt ctgttaaaga
    21901 aaattaaata agcacttgat aatgttgttg cttcaacaaa tacccacgca atgccaaggt
    21961 ctgtgctcaa aatagtacca gtcattgccc atacaaatgt cagtaccata aaccagtaaa
    22021 ggcatatttt tgtgtcttta acctgtaccc cgaatgaagg cagatgtttt gagtatccgt
    22081 tgttgtatat tgtcaccatc aaaaatacaa acgagagcac aagcaaaaat atcttgtttg
    22141 tgttgtccac agcaaagtaa tgcgatgctc cgctcatttt tgttgtgaaa gtgagcatta
    22201 gtgtgataat aaaatgcatg attgcatata cattcaaaag caggttatca aaggctcttt
    22261 ttctaaccag aagcataagt atgccggcta ttatcggaaa aattaaaata gtgttaatca
    22321 ttgtattcat agtcctttaa atctgataaa ttagacactt caaggtcttt aaattctttg
    22381 ttgattacat ttacaaacaa accgagaata tacacggcga taaatacgtc aagcaaaaca
    22441 cccagattta caagtatagg catttctttt gctacagata aagaaagcag aaatattccg
    22501 ttttccattg taataaactc gattacgttt gaaatgattt tgtgtttgat agttatgagc
    22561 cacaggctta ttacaatcgt tgcaacagat accccgaagt aaatcggaga aatcattttt
    22621 actgaagaga accagtaatt agaaacaagg aaccctgcaa gcagaataac acttgctata
    22681 acaagacagt aaaaatgcgg tacattgggg gcaaaatctc tgttagagtt tgttttgtgt
    22741 aatattttgt ataaaaacca ggggattatt attgctttta nncccgagag tttccagcgt
    22801 taaaaatgaa aagtttaaaa cacctgtgtg ttcgctgtgc ccaaaacagc agataagaaa
    22861 cagcagcact ccctgagcta tcaaaagtct tatgtgagag ataagtctgc tggttgctgc
    22921 caaatacagc attgaaagtc cgaataatag tataaatccg ttttccatta tgttttcctt
    22981 agcctccaaa catccttgca acaaccagtg acaatacaac aagagcaaaa gaactcatga
    23041 tgaatacaaa ttcaaatacg tgagacattc tgattcttgc catacctgat tctaccgtac
    23101 cgatgataac ggagattgca aaaattataa ataagtacaa agctgttgat accaattcac
    23161 taaagtgtgc cggtattaaa atattggcaa tcaaagacga aattaaaagc atttttatgg
    23221 aattgcccca tgttaaaaga gcaaggtcgc ttcctgaatt gtccagaatc attacttcgt
    23281 gaatcattgt caattcaagg tgagtagtgg ggtcatcaac aggcaccctt gaaccttcaa
    23341 ttaatatcat taaaaatagt gctgcaacgg caaatattgt aattaatatt ccatagcttc
    23401 cggcattttc aagaatccct tttaaactag taaaagtaaa gttgccagta agcgccatta
    23461 cagaagcaat aatcataaaa aatgcgggtt caacaatggt tgtaaaacaa gcttctcttg
    23521 aagctcccat accctcaaaa ctgctgcctg tgtccattgc agatatgagc gaaaagaatt
    23581 ttccaagccc taatacataa gcaaaaatta ttatacctgc ctgaatattg ataagtgctg
    23641 tgcctgtagc catcggaaca aacagtgatg cggccagtac tgatgatatt gcaacaacag
    23701 gtgctatttt aaaaac
//
LOCUS       DABS01000064            7289 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_2663, whole genome shotgun sequence.
ACCESSION   DABS01000064 DABS01000000
VERSION     DABS01000064.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7289)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7289)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7289
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            181..852
                     /gene="tmk"
                     /locus_tag="CPT85_02395"
     CDS             181..852
                     /gene="tmk"
                     /locus_tag="CPT85_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011939422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="DAB25417.1"
                     /translation="MRLFKPHELPGTLICVEGIDGSGKSTQLAILRDWLKSKNLDVIF
                     TEWNSSDLISQTTKKAKKKNLLSPRTFSLLHAVDFADRLEQVIIPAMKAGFIVLADRY
                     VYTAFARDVARGVDRDWVRNMYGFAVKPDLALYYSIPAEVSLERICANRAPSFYEAGM
                     DLKLSNNPYKSYVIFQSRVNEEYADMVNEFGLVRIDANNTIHSKQVLLRQYVTELLSK
                     KGIQI"
     gene            854..1081
                     /locus_tag="CPT85_02400"
     CDS             854..1081
                     /locus_tag="CPT85_02400"
                     /inference="COORDINATES: protein motif:HMM:PF02223.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25409.1"
                     /translation="MESCKKGHKGLLIVIEGTDGSGKSTQIEKLRRWIEDKSYGCMVS
                     EWKTSRLIANVIDDAKDRNLLNATTXPFICS"
     gene            1014..1517
                     /locus_tag="CPT85_02405"
     CDS             1014..1517
                     /locus_tag="CPT85_02405"
                     /inference="COORDINATES: protein motif:HMM:PF02223.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25410.1"
                     /translation="MLLTMQKTETFLTQQHXLLYAADFADRLENTIIPALDSGFVVLL
                     DRYTYTAFARDVVRGLNIDWVKQLYNYAPEPDLVFYLDMPIDVLLKRVIGTTGLDYWE
                     SGRDIGLSTDFYESFKIYQAKCLEEYNKMKPEYNFVSIDGTLPREDIHNKMIEHVEKL
                     LNTGKLD"
     assembly_gap    1062..1063
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1603..1884
                     /locus_tag="CPT85_02410"
     CDS             1603..1884
                     /locus_tag="CPT85_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013119756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit C"
                     /protein_id="DAB25411.1"
                     /translation="MITIKDVEHVAKLARLELTEEEKVKFSKQLGDILKYVEQMNEVD
                     TTNVEPMSHAIPVVNVMREDVVVSEQTKEELMANAPFKEDGFFRVPKIN"
     gene            1972..3568
                     /locus_tag="CPT85_02415"
                     /pseudo
     CDS             1972..3568
                     /locus_tag="CPT85_02415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013276901.1"
                     /note="frameshifted; too many ambiguous residues; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthetase"
     assembly_gap    2019..2097
                     /estimated_length=79
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3638..4441
                     /locus_tag="CPT85_02420"
     CDS             3638..4441
                     /locus_tag="CPT85_02420"
                     /inference="COORDINATES: protein motif:HMM:PRK00346.1-4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="DAB25412.1"
                     /translation="MNILLSNDDGLMANGIRALTEALSCEHDVYVIAPDRERSAAGHS
                     LTLHTPLRVEELEPKFGAKRNWVTTGTPGDCVKIGLSAILEPHEMPDLVISGINHGPN
                     LGADILYSGTVSCALEGAMLGFPAIATSLAGLHYEVENFEYAANFMAKFVHKIKEINF
                     PQKSILNINFPSLEEEDIAGIAITKLGTRMFTSKYDKRLDPRGKTYYWLAGELIEYDE
                     NDGTDINAVRMNKVSITPITFEMTHQSIIKDLEKAFCSEESCDFFAPKE"
     gene            4514..5626
                     /locus_tag="CPT85_02425"
     CDS             4514..5626
                     /locus_tag="CPT85_02425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015390735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="DAB25413.1"
                     /translation="MSKIKVLTVFGTRPEAIKMAPLVKELEKHPDKIESIVCVTAQHR
                     QMLDQVLELFKIKPDFDLNIMKPNQDLWTITSDVLLLMKDVFEKSKPDIVLVHGDTTT
                     SMAAALSAFYAKIPVGHVEAGLRTFDKHYPFPEEINRVFADAVCTYHFAPTDTSVDNL
                     IKSAIPKDHIYKTGNTVIDALLHTVENNKTDLSYIGLNPELKTILLTSHRRENFGEPI
                     RNICKAVLELVEKNKDIQVVYPVHLNPNVQKPVKELLNGKERIYLIEPMEYAPFSSLM
                     KEANIIMTDSGGVQEEAPSLGKPVLVLRSTTERPEAVEYGTVKLVGTDKDKIVAEVQN
                     LLDNETEYKKMSEASNPYGDGLASKRITDIIIKELG"
     gene            complement(5628..6314)
                     /locus_tag="CPT85_02430"
     CDS             complement(5628..6314)
                     /locus_tag="CPT85_02430"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25414.1"
                     /translation="MTLAQKILSALFIVIIAISLFLVVLKPVITSKYISVAKKYARGQ
                     YTCTLDNQGNHVAKLYKINSGKKTLVKTAVSNSCIFSRPKVNAGFFVFAIGGGGGATP
                     YESGNAGKIVSKHRAINKPVIVIKIGKGGHGTYVGENGTFIDSQDGYPTVIEDLKIIA
                     LGGAKSSRMTPLGSAPRIVEYHIPDKYHYLYDIPKSAKYGAGGQFDKHTKDTSARSNS
                     GHSGAVVIQW"
     assembly_gap    6507..6567
                     /estimated_length=61
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <6568..6696
                     /locus_tag="CPT85_02435"
     CDS             <6568..6696
                     /locus_tag="CPT85_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005366192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="DAB25415.1"
                     /translation="FGKGVMVKEFEDAAFSMNVGDLSEPIQTQFGWHLLYLTDKKD"
     gene            6699..>7289
                     /locus_tag="CPT85_02440"
     CDS             6699..>7289
                     /locus_tag="CPT85_02440"
                     /inference="COORDINATES: protein motif:HMM:PF01321.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25416.1"
                     /translation="MIDKLREFLKDNNLDCLLVNTTDEFLVEYNELCNCARYCVTGFS
                     GSTGDVLVTKERVYQFADGRYHEQADAEVDHETTDVVKLQLGQTLLSELAAKIAPESV
                     VGVVSNKISLNFYKALKFALNKKHCKIKPLDFDPVGLFKELKPSDNGQTVKQIDLSIA
                     GVSADEKFKKLAKKLKNDEAYLDTHLENIAYFTNCRQ"
BASE COUNT         2482 a         1307 c         1438 g         1920 t
ORIGIN      
        1 atacaaaaca gataaaccag agttttttat aataacagaa tctttttgcg gcggttatgg
       61 aaaatttgtt tgtgatgaaa taaaaaaatc ttaccggata aaaaggtcgg attccgtttt
      121 aatatttgaa aaaatatgat aatataattt aaaacaaaga gtttgaaagg tccttttgaa
      181 atgagattat ttaagcccca tgagctgccg ggtacactga tttgcgttga aggaattgac
      241 ggttcgggta aatctaccca gcttgcaata cttagagact ggttaaaatc aaaaaatttg
      301 gacgtaattt ttacggaatg gaattcgtct gatttgattt ctcaaacaac aaaaaaagca
      361 aaaaagaaaa atctcttgag tccgcggact ttcagccttt tgcatgctgt cgattttgcg
      421 gacagactgg aacaagtaat tataccggca atgaaagcag ggtttattgt gctcgctgac
      481 agatacgtat acacagcatt tgcacgtgat gtggcaagag gtgtagacag agactgggta
      541 agaaacatgt acggatttgc cgtaaaaccg gatttggcac tatattacag catccctgca
      601 gaggtttctt tagaaagaat ctgtgcaaac cgtgctccgt ctttttacga agcgggaatg
      661 gatttaaaat tgagcaacaa tccttacaaa agctatgtga tttttcaaag cagggtgaat
      721 gaagaatatg ccgatatggt aaacgaattt ggtcttgtaa gaattgatgc aaacaacaca
      781 attcactcaa aacaggtact tttaagacaa tacgtaacag aacttttaag caaaaaagga
      841 atacaaattt aaaatggaaa gctgcaaaaa aggccacaag ggcctcttaa tagtaataga
      901 aggtactgac gggtcaggaa aatctacaca gatagaaaaa ctccgccgct ggatagaaga
      961 caaaagctac ggctgtatgg tttccgaatg gaaaaccagc cgtcttatag caaatgttat
     1021 tgacgatgca aaagacagaa accttcttaa cgcaacaaca tnncctttta tatgcagctg
     1081 attttgctga taggctggaa aataccatta ttcctgcact tgattcgggt tttgttgtgt
     1141 tgttagacag atacacttac actgcttttg caagagatgt tgtaagagga ttaaatatcg
     1201 actgggttaa gcaattatac aattatgcac ctgagcctga tcttgttttt taccttgata
     1261 tgcctataga tgttctgcta aaaagagtca tcggcacaac agggctggat tactgggaat
     1321 caggcagaga tatcggtttg agtacagatt tttacgaaag ttttaaaatc tatcaggcaa
     1381 aatgtcttga agaatacaac aaaatgaaac ctgaatacaa ttttgtcagc attgacggaa
     1441 ccctgccaag agaagacatc cacaataaaa tgattgaaca cgttgaaaag ttattaaata
     1501 caggcaagct ggattagtgt aaaaaaatca caacaaacca tggtaaaatc attttggcca
     1561 tggtacaaat atatataaat atatttctgt ttggagtaaa aaatgattac cataaaagat
     1621 gtagaacatg ttgccaagct cgcaagactg gagcttactg aagaagaaaa agttaaattt
     1681 tcaaaacagc tgggtgatat tttaaaatat gtcgaacaaa tgaatgaagt cgacaccaca
     1741 aacgtagaac caatgagcca cgcaatacct gttgttaacg ttatgcgtga ggatgttgtg
     1801 gtttcggaac agacaaaaga ggaactgatg gccaacgcgc cttttaaaga ggacgggttt
     1861 ttcagggttc caaaaattaa ttaacttttc taaaagctta gaggaccacc ctctaagctt
     1921 tttaactata aaggaaatca gtatcagact attattaata aggggaaaaa aatgacaact
     1981 aagtacattt ttgtaacagg cggtgtagtt tcatcactnn nnnnnnnnnn nnnnnnnnnn
     2041 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnntgt
     2101 tgaccccggg acaatgagtc cgtttcagca cggtgaagta tttgtgacag atgacggagc
     2161 cgaaactgac cttgatttgg ggcattatga aagattcacc gatacatctc ttggcagagt
     2221 caacaacgta acatcgggct ctatttatca aacagtaata aaaaaagaac gtaaaggcga
     2281 atatctgggt gcaactgtcc agacaattcc tcatatcacc aatgagatca aatcaagaat
     2341 caagaaagcg gcttctcaat ttaaacctga ttttttgatt atagaaatcg gcggcacaat
     2401 aggtgacatt gaaagtcttc cttttattga atcaatcaga caattcaaaa ccgaaatcgg
     2461 ctttggcaac agcatcaata tccatgtgac attgataccg tatctgccaa catcaggaga
     2521 gttaaaaaca aaaccttccc aacacagtgt tgctgtgtta agaagctacg gactgcagcc
     2581 tgaaattctt gtttgcagaa caacacgttc tatccctaaa aaagaaaaag aaaagcttgc
     2641 tctgttctgc tctgtgcctg ttgatgctgt tatcgagtgc aaagatttaa aatcaattta
     2701 cgaagtgcct cttgctctgg aagaacaaaa tatggcgcat gttgtacttc aaagattaca
     2761 actgcttgat aaaaagccta acctcgacag ctggaaaaag ctggttgata caatcaaaaa
     2821 tcctactaaa acatttaaaa ttgcaattgc aggaaaatac acaggacttt cagacgctta
     2881 catatctgtt gtggaatcgt taaaacatgc cggatacgca caccatgcaa aaattgatat
     2941 caaatggata aactccgaag attgtactga catgaaaaaa gcaaaagaag tattaagtga
     3001 cgtggacggc cttgttgtgc cgggaggatt tggcgtaaga ggaattgagg gaaaacttaa
     3061 tgcaataaga tacgcaagag aaaacaatct tccattcctg gggctttgcc ttggtatgca
     3121 gtgttctgtt attgaatatg caaggaatgt tgttggttta aaagatgcca attcaatgga
     3181 atttaacgaa ggcacgccat accctgtaat cgacattatg ctggagcaaa aaaatattga
     3241 aaacatggga ggcacaatgc gccttggcaa atacgactgt gtattgaaaa aaggtacaaa
     3301 ggcttacgat gcttacggca aagtaaaaac aatctccgaa cgccaccgtc acagatatga
     3361 agtaaacaat gaatacaaag aacaaataga aaaagccgga ttggtatttt ccggaatgtc
     3421 gcctgacggt cagctgtgcg aaatagtaga atatccaaaa aatgactggt ttgtggcttg
     3481 tcaattccac ccggaattca aatccagacc cgaacatccg caccccttgt ttgcaggcct
     3541 gataaatgct ataaataaaa agaaatagca ttctatggtt tataacttgt aaaaacgggc
     3601 ataaatcatg taggaagaca taaaacagga gtgtgtaatg aatattctac tatcaaacga
     3661 tgacggactt atggcgaacg gtatcagagc tttgacagag gcattgagct gtgagcacga
     3721 tgtgtatgta attgcacctg acagagaaag aagtgcggca ggacactccc tgacactgca
     3781 cactccgctg agagttgaag aactcgaacc taaattcgga gcaaaaagaa actgggtcac
     3841 aacaggaaca cccggtgact gcgttaaaat aggcttgagt gcaattttag aaccgcatga
     3901 aatgcctgac cttgttatat caggtatcaa ccacgggcca aatcttggag ctgatatcct
     3961 ttattccggc acggtaagct gcgctttaga aggtgcaatg cttggttttc cggcaattgc
     4021 aacatctctg gcaggccttc attacgaggt agaaaacttt gaatacgcag ctaactttat
     4081 ggcaaaattt gtgcataaaa ttaaggaaat caacttcccg caaaaatcta tcctcaacat
     4141 caacttccct tcgctggaag aagaagatat cgccggtatt gcaataacaa aactcggcac
     4201 aagaatgttt acaagcaaat atgacaaacg tcttgatccg agaggcaaaa catattactg
     4261 gcttgcaggc gaattgattg aatacgatga aaacgacgga acagatatca acgctgtgcg
     4321 aatgaacaaa gtttcaatta cgcctataac atttgaaatg acacaccaga gtattattaa
     4381 agacctggaa aaagcttttt gttcagaaga atcgtgcgat ttttttgcac ctaaagaata
     4441 gatgttatta caaaaaataa atctttgact tataatatcc ttaagtttaa atcaaaccta
     4501 aggatattat tttatgtcaa aaattaaagt attaacggtg tttggtacac gtccggaagc
     4561 aataaaaatg gctccgctgg taaaagagct tgaaaaacat cctgataaaa tagaaagtat
     4621 tgtttgcgta acagcacagc acaggcaaat gcttgatcag gtacttgagc tttttaaaat
     4681 aaaacctgat tttgatttaa acataatgaa accaaatcaa gacctgtgga caataacatc
     4741 tgatgtactg ctgttaatga aagatgtttt tgaaaagagc aaaccggata ttgtgcttgt
     4801 gcacggagac acaacaacat cgatggcagc agctctatct gctttttatg caaaaatccc
     4861 tgtgggtcat gtcgaagcag gtttgagaac atttgataag cactatcctt ttccggaaga
     4921 aatcaacaga gtatttgcag atgcggtgtg cacttaccac tttgcaccaa cagacacaag
     4981 cgtggacaac ctgataaaat cagccatacc taaagaccat atatataaaa caggaaacac
     5041 tgtaatagat gcgcttttgc acactgtaga aaacaataaa acagatttga gctatattgg
     5101 actgaaccct gaattaaaaa caatattatt gacttctcac agaagagaaa actttggcga
     5161 accaataaga aatatctgta aagcagtgct tgagcttgtt gaaaaaaaca aagatattca
     5221 agttgtgtac cctgtgcatt taaaccctaa tgtacaaaag cctgtaaaag aacttttgaa
     5281 cggaaaagaa agaatttacc ttattgagcc aatggaatac gctccttttt cttctttaat
     5341 gaaagaggct aatatcatta tgacagattc cggcggagtg caggaagaag ctccttcttt
     5401 gggcaagcct gttcttgttt taagaagcac aacagaacgc cctgaagcag tggaatacgg
     5461 aacagtaaaa cttgtaggaa cagacaaaga caaaattgtt gctgaggtgc aaaaccttct
     5521 ggacaacgaa acagaataca aaaaaatgtc cgaagcctct aacccatacg gcgacggtct
     5581 tgcaagcaaa cgcattacag atatcataat aaaagaactc ggctaaacta ccactgaata
     5641 acaaccgcac cgctatgtcc gctgttagag cgtgcgcttg tatcttttgt atgcttatca
     5701 aattgtccgc ctgctccgta ttttgcagat tttggaatat cgtacaaata atgatattta
     5761 tccggtatat gatactccac aattcttgga gcactgccaa gaggagtcat cctggatgac
     5821 tttgctccgc ccagtgcaat tatttttaaa tcttctatta cagtaggata accgtcttga
     5881 gaatctataa atgtgccgtt ttcgccaaca tacgtgccat gtccgccttt acctattttt
     5941 ataacaatta cgggtttgtt tattgccctg tgttttgaca caattttacc cgcattaccg
     6001 ctctcataag gcgttgcacc accgccaccg cctattgcaa atacaaaaaa tcctgcatta
     6061 acctttggtc tggaaaaaat gcagctattg cttacagcag tttttaccaa cgtttttttg
     6121 ccgctattta ttttataaag ctttgcaaca tggttgcctt gattatcaag cgtgcaggtg
     6181 tattgacccc gtgcatattt ttttgcaaca gatatgtatt ttgaagttat aacgggtttt
     6241 agcactacta aaaataacga tattgcaata attacaataa ataatgcaga aagaattttt
     6301 tgtgccaaag tcatattata cgcaagcctt ttaaataata ccccattcta atctttttgc
     6361 cgtcggattg caagacgtgt taaaaagctg ttataatcgt atgcgtaaac ataaagaagg
     6421 aattttatta tgacaacaga agttagagca agccatcttc ttgttcaaac agaagaagaa
     6481 gcgaaaaaat tgagagaaga aatcttnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     6541 nnnnnnnnnn nnnnnnnnnn nnnnnnnttt ggcaaaggtg taatggtaaa agaatttgaa
     6601 gatgcagctt tttcaatgaa tgtaggcgat ttgtcagaac ctatccaaac acaatttggc
     6661 tggcatttgc tctacttaac cgataaaaaa gactaattat gattgataaa ttaagagaat
     6721 ttttaaaaga taacaacctt gactgtctgc ttgtcaacac aacagacgag tttcttgtgg
     6781 aatacaatga gctttgcaac tgtgcaaggt attgtgtcac ggggttttcc ggctccaccg
     6841 gcgatgtgct ggttacaaaa gagcgcgttt accagtttgc agacggaaga tatcacgagc
     6901 aggcagatgc ggaagttgac cacgaaacaa cagatgttgt aaaactgcag ctcgggcaga
     6961 ctttgttaag cgaactagcg gcaaaaatag caccggaaag tgtcgtagga gttgtgtcca
     7021 ataaaatttc tcttaatttt tataaagcac taaaatttgc actcaataaa aaacactgca
     7081 agataaaacc gctagatttt gaccctgtag gacttttcaa agagttaaag ccaagcgata
     7141 acgggcagac agtcaagcaa attgatcttt ccattgcagg agtgagtgct gatgaaaagt
     7201 ttaaaaaact ggcaaaaaaa ctcaaaaacg acgaggcgta tctcgataca caccttgaaa
     7261 acattgcgta ttttacaaac tgccggcag
//
LOCUS       DABS01000065            9781 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_23373, whole genome shotgun sequence.
ACCESSION   DABS01000065 DABS01000000
VERSION     DABS01000065.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 9781)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 9781)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9781
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..338)
                     /locus_tag="CPT85_02445"
     CDS             complement(<1..338)
                     /locus_tag="CPT85_02445"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25398.1"
                     /translation="MQERKEEYKYRLQNGFLKGXXXYEKIYNAAKMSPKESEKFLAAI
                     KNVYDQAWKVMEEYLFACGVLCFLPRKILSHFKNEINIKPWIAFIDEYNSYFKNQNTA
                     SAEQFIKSYFL"
     assembly_gap    274..279
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(352..780)
                     /locus_tag="CPT85_02450"
     CDS             complement(352..780)
                     /locus_tag="CPT85_02450"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25399.1"
                     /translation="MENTIKWKQMYNEDFKKYLDFVVSLKTKLEKLDLSKLPEDKKEA
                     LCKRYEKLFSLSCDLLGEYLSYNGIFAVDKSQIIKFAFNTELIDDGQKWIYLFFLFNR
                     FKKEGYEKSGKFILLHLNADYITLFENLNNYFEKECKQIN"
     gene            complement(786..2849)
                     /locus_tag="CPT85_02455"
     CDS             complement(786..2849)
                     /locus_tag="CPT85_02455"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="DAB25400.1"
                     /translation="MSEFEMPRKFKNPKKNSAWKQFFVMLFSIMLAGFIGVNLYLTSQ
                     PPIQHLEDFKPNVVTKIYSADEEVIKTFTAYKFEKVDIKDVPDNIKNAIVATEDKNFY
                     HHHGYDPIGVARSMVVNLTTGGLTQGASTITQQLARILFLSNEKTFDRKIKEFIVAAR
                     IEKTLPKDKILEMYLNNVYLGSGAYGVAGAAQIYFNKPLKDLTLAECALIAGLPQAPS
                     VYSPYNNKKLAIERRNQVLGRMLKMRYITKEQYKQALDEQLRLNPNPSIYSLNRAPYF
                     VDFAMKELEELGFDETEISQGGYKVVTTLNYAAQKAAEDAVNAQVGNRQAAVFSFSPI
                     TGEIYVYIGGKNYFKSQYDRVTQSVRPPGSAFKPFVYAAAIEKGWGPNDMLEDTPVNI
                     NGWKPHNYNNRYRGQMPLYMGLMLSSNVMAARLIKDVGVRSVIGIARSLGITTPIEYD
                     MTIALGSNGVKLYEMTVAYGAFANGGFKVKPYAIERVETSRGKVIYQAPKTRVMKVLN
                     LNTAAVVTAMLKTVVENGTGRSANIGKPAAGKTGTTDDSKDASFYGYTPDVVTGVWVG
                     NDDNSQMGSVYGSTIPAAIWKAAMKVATQKFGASDFDYPSIELKRYATGAAKTIGDDE
                     AFDKPKTDTPAEGEAAVDNPNTSVQQQQNTAPNPVSFNNTFLEPAKPAAPVNPPVPPM
                     PAMQR"
     gene            2965..3468
                     /gene="rimI"
                     /locus_tag="CPT85_02460"
     CDS             2965..3468
                     /gene="rimI"
                     /locus_tag="CPT85_02460"
                     /inference="COORDINATES: protein motif:HMM:TIGR01575"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal-protein-alanine N-acetyltransferase"
                     /protein_id="DAB25401.1"
                     /translation="MNAYIRRMSKSDVDDVVKLEALSYGEHHWSKESFYNELENNLAY
                     YYCAVDENNRLIGYAGCWHIFEEAHITTLSVHPDFRNHGVAQKLIFAIIDDCYKAKIK
                     YITLEVRESNVAAISLYEKNGFKAIGTXXYYQDNNENALIMFTENIWYEKFRKRYTKL
                     HQELQIK"
     assembly_gap    3354..3355
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3465..4121
                     /locus_tag="CPT85_02465"
     CDS             3465..4121
                     /locus_tag="CPT85_02465"
                     /inference="COORDINATES: protein motif:HMM:PF02632.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="DAB25402.1"
                     /translation="MNTKRLKEELDAFNAENKKLKITFGTLVVMGWCVFLIIIATFTQ
                     LDFSHYVPGSLNPADPSFLKLKHCVYIPQIPVIFFIAALIGKRFGITAVTIYILLGLT
                     FFPVFALGGGIGYIFQYNFGYILAYLPAIFIVAFTLKDKFNFLTIAKASLLGVLTIHI
                     IGVFYLILMAIIHQDPFSHVAGWISMQSGAKMIYDFVFGYFAILLAKPVKQILWLSMG
                     "
     gene            complement(4110..4685)
                     /locus_tag="CPT85_02470"
     CDS             complement(4110..4685)
                     /locus_tag="CPT85_02470"
                     /inference="COORDINATES: protein motif:HMM:PF05258.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25403.1"
                     /translation="MDKKEILYSDFNSIENILGAVMKNPKLKQGLKNATIFKFWPKVA
                     GKKFEKYSKANGLTQTPEGHVLTVACANAAVSSELLMFKQDILKKMNIYSKPLGVEIT
                     DINFSHKIWSSSKNTQQAAFSIEERNPYKPDLSNFDPSKIELDPLEVEAIKNSVDNNK
                     FATPEQREKMFNAIILDLKTQKYVKDNNLSH"
     gene            complement(4722..5405)
                     /locus_tag="CPT85_02475"
     CDS             complement(4722..5405)
                     /locus_tag="CPT85_02475"
                     /inference="COORDINATES: protein motif:HMM:PF02348.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25404.1"
                     /translation="MFNPQGTKSNGSSCXXGSKGIPGKNIKPLAGKPLVAYTIEAAHN
                     SKYITRTVVSTESSKIKDVCLALGAEVIDRPEELARDETKTAPVLLQVVETLEKQGYK
                     PDVVILLQATCPLRDGKEIDEAFELFLENEPQGCDSVFAGKVIGLTHSKWRKDPADGH
                     YECLYDYRNRPRRQDSDKHFQMLTETGATYIIKTDVMKEVKDFIGKKXQAADAWILTQ
                     SRILKPLQK"
     assembly_gap    4783..4784
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    5359..5362
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5405..5593)
                     /locus_tag="CPT85_02480"
     CDS             complement(5405..5593)
                     /locus_tag="CPT85_02480"
                     /inference="COORDINATES: protein motif:HMM:PF01402.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="DAB25405.1"
                     /translation="MARILVSMPDEFLSKIDQVAGSEQRTRSELVREALRSYIKRTKL
                     PSPQKALNNAKILEEILD"
     gene            complement(5717..5968)
                     /locus_tag="CPT85_02485"
     CDS             complement(5717..5968)
                     /locus_tag="CPT85_02485"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25406.1"
                     /translation="MFEEIKTGTVQEVIDYYKTNTLKGEIVCMLYAGQNADEEEYKII
                     ENIKKLKSAAYTDKDISQILSTLYGYNKNKVYKLALALK"
     gene            complement(5961..6539)
                     /gene="rsmI"
                     /locus_tag="CPT85_02490"
                     /pseudo
     CDS             complement(5961..6539)
                     /gene="rsmI"
                     /locus_tag="CPT85_02490"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
     assembly_gap    5978..5987
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(6532..6834)
                     /locus_tag="CPT85_02495"
     CDS             complement(6532..6834)
                     /locus_tag="CPT85_02495"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25407.1"
                     /translation="MQKIYIHSWLDKKYPAAGFIQSADNELELDFSNVDEICLKDIEK
                     LLDLQKIAVFNEIKIHVENMKPNISRLFEQTGLYKMLTFGNPQKIRTRKRQGLAFD"
     gene            complement(7010..9682)
                     /locus_tag="CPT85_02500"
     CDS             complement(7010..9682)
                     /locus_tag="CPT85_02500"
                     /inference="COORDINATES: protein motif:HMM:PRK00252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="DAB25408.1"
                     /translation="MSEIQHKPLTGAQIREAFLKFFAEKHQSTIVKSSSLVPDNPTVL
                     LTTAGMLQFVPYFLGYEECPYDPKRITTCQKCARAGGKDSDIENVGRTPRHHTFFEML
                     GNFSFGDYYKEEVIPWAWDFVTNYLHLDPERLYITIYTDDDEAFDIWHNKVGIPAEKI
                     FRKGKKDNFWGPVSDVGSCGPCSEIHYDLGEDMKCSDDCSVATCECDRWVEIWNLVFT
                     ELFKDKEGNYLPLEKKNVDTGMGLERIAMVVQGKTSTFETDLLTPILDKVCEMTGKKY
                     KQDNKTDISLRIITDHARCVSFMISDGIVPGNEGRNYVLRMIMRRALRHGKMLGLELP
                     FLYNIVDTVVDNYKEAYPELDENRQKIKDVIKKEEEKFKQTLDRGQKLLDDLLSDGSK
                     EISGENAFKLYDTYGFPLELTVEIAQEKGISVDEEGFKKCMKEQKERAKAAAQKIILT
                     DDLIYIDIEKEKGETVFTGYEKTCGEGKVVALVKDAQKIDSADEGETVDIILDTTPFY
                     AECGGQVGDSGVIEGKNFKAKVLNTFKVDNLYAHRAEITEGTVKANDTVCAAIDEYRR
                     KQITAHHTTAHLLQSALQKVLGDGVKQAGSQVEPDKTRFDFSFDRAMTASEIEQVEEL
                     MNNWISQGLEQHTDVMDAEEAKKCGAMALFGEKYGDKVRVVGVKDKKGNFVSRELCGG
                     THVNNTAEIRLAKVVQESAISAGSRRIEVVVADAAFKFLNDRAKEAEKLAHLFKSQVG
                     EIGERVDKLIETNKTLTKRTVELQKEIANAKFSTFLSKTQEIKDGKLFISKIEDFEPA
                     MVKEFVEKLSDKLGNSIIVIAALKKDGGVFIMVKVSDNFVQKGVNAGKIVGEIAAATE
                     GKGGGRPNFAQGAGSNAANLDKVLADVEKELKLL"
BASE COUNT         2561 a         1893 c         1756 g         3547 t
ORIGIN      
        1 agaaaatagc tttttataaa ttgttctgct gaagcagtat tctgattctt aaaataacta
       61 ttatattcat caataaaagc aatccagggt tttatgttta tttcgttttt aaaatggctt
      121 aatatttttc tgggtaaaaa acacaaaact ccgcaagcaa ataaatattc ttccataacc
      181 ttccaggcct ggtcataaac attttttatt gcagcaagaa atttttctga ctcttttggt
      241 gacatttttg ctgcgttata gattttttca tacnnnnnnt atccttttaa aaagccgttt
      301 tgaagcctgt atttatattc ttcttttctt tcttgcataa aatccacttt gttaattaat
      361 ttgcttgcac tctttttcaa aataattgtt caagttttca aataaagtaa tgtaatcagc
      421 atttaaatgc aataatataa actttcctga tttttcatat ccttcttttt tgaaacgatt
      481 aaacaggaaa aataggtata tccatttttg tccgtcatca ataagctctg tattaaaagc
      541 aaattttata atctgacttt tgtctactgc aaaaataccg ttataactca gatattctcc
      601 aagtaaatca caggaaagcg aaaacaattt ttcgtatctt ttgcacaagg cttctttttt
      661 gtcttcaggg agttttgaca aatcaagctt ttccagcttt gtttttaacg aaaccacaaa
      721 gtcaagatac tttttaaagt cttcgttgta catttgtttc catttgatag tattttccat
      781 ttttgttacc tttgcattgc gggcattggt ggaaccggag gattaacagg cgctgccggt
      841 tttgccggtt ctaagaaagt attgttaaat gatacagggt ttggtgcagt attttgctgt
      901 tgctgtactg aggtattagg attgtctaca gcagcctctc cttctgccgg agtgtcagtt
      961 tttggtttgt caaaagcttc gtcatctccg atagtttttg ctgcaccggt tgcatatctt
     1021 ttgagttcaa ttgagggata atcaaaatca gaagcgccga atttttgtgt tgcaactttc
     1081 attgcagctt tccagatagc agcagggatt gtgcttccgt atacgcttcc catttgtgag
     1141 ttgtcgtcgt ttcctaccca tacccctgta acaacatcag gcgtgtaacc atagaatgat
     1201 gcgtctttgc tgtcatcagt tgtacctgtt ttacctgctg ccggtttgcc tatattggca
     1261 cttcttcctg ttccgttttc cacaactgtt tttaacattg ctgttactac agctgctgtg
     1321 ttaaggttta ataccttcat tacccttgtt tttggtgcct gatatatgac ttttcctctt
     1381 gaggtttcta ctctttcgat tgcatagggt ttaactttaa aacctccgtt tgcaaaagca
     1441 ccgtatgcca ctgtcatttc atagagttta accccgttag agcctaatgc aattgtcata
     1501 tcgtattcta taggggttgt aatgcccagg gaacgggcga ttcctataac agagcgtaca
     1561 cctacatctt ttatgagtct tgcagccata acgtttgaag ataacatcaa gcccatatac
     1621 aaaggcattt gacctctata tctgttgttg tagttgtgtg gtttccagcc gtttatatta
     1681 accggtgtat cttccagcat atcattaggg ccccagcctt tttcaatggc tgctgcataa
     1741 acaaaaggct taaatgcaga acccggaggt ctaactgatt gtgttacacg gtcatactgg
     1801 cttttaaaat aattttttcc gcctatataa acatagattt caccggttat gggcgagaat
     1861 gaaaatacag ctgcttgtct attgccgacc tgtgcattta ctgcatcttc ggcagctttt
     1921 tgtgctgcat aattcagggt tgtaactact ttgtagccgc cttgcgaaat ttctgtttca
     1981 tcaaatccca gctcttccag ctctttcatt gcaaagtcaa caaaataagg agctctgttc
     2041 aaagaatata tgctgggatt cgggttcagg cgtaattgtt catcaagagc ctgtttgtat
     2101 tgttcttttg ttatgtatct catcttgagc attctgccaa gaacctgatt gcgtctttcg
     2161 atagcaagtt ttttgttgtt gtaaggtgaa taaacagaag gtgcctgcgg caaacctgct
     2221 attaatgcac attctgcaag ggtaaggtct ttaagcggtt tgttaaaata tatttgtgca
     2281 gctcctgcaa caccgtaagc ccctgagcca aggtatacgt tattcaaata catttcaaga
     2341 attttatcct tgggcagagt tttttcaatt cttgccgcaa caataaattc ctttatcttt
     2401 ctatcaaaag ttttttcgtt actcaaaaac aaaattcttg caagctgttg tgtgattgta
     2461 ctggcaccct gtgtaagccc gcctgtagta aggtttacaa ccattgaacg agcaacacct
     2521 atagggtcat agccgtggtg gtggtagaaa tttttgtctt ctgtagcaac aattgcgttt
     2581 tttatgttgt ctggaacatc ttttatatca actttttcaa acttataagc agtgaatgtt
     2641 ttaataactt cttcatcagc agaataaatt tttgtcacaa cattgggttt aaaatcttcc
     2701 agatgctgta taggaggctg cgatgttaaa tataaattta caccgataaa acctgcaagc
     2761 attatagaaa acaacattac aaaaaattgt ttccacgcgc tgtttttttt cgggttttta
     2821 aactttcttg gcatttcaaa ttctgacata tatacaatcc ataatctcta gtaatatagc
     2881 tgtattctac caaacaaaat atataaatac aatgaattgt acatatgttt gagttttgta
     2941 tactgttttg ataatattta agttatgaac gcttatatca gacgaatgtc aaaatcagat
     3001 gtggatgatg ttgtaaaact cgaggctctc tcatacggtg agcatcactg gtcaaaagag
     3061 tctttttaca atgaactgga aaacaacctt gcctattatt attgtgcagt ggacgaaaat
     3121 aacaggctta taggttatgc cggctgctgg catatctttg aagaagctca tataacaaca
     3181 ctttccgttc atcctgattt tagaaatcac ggtgttgctc aaaaactcat ctttgcaatt
     3241 atagatgact gctacaaagc aaaaattaaa tatattacgc tggaggtcag agagtctaac
     3301 gtagcggcta tatctttgta tgaaaaaaat ggattcaaag ccattggtac aagnngctac
     3361 taccaagaca acaatgaaaa tgccctgatt atgttcacag aaaacatctg gtacgaaaaa
     3421 ttcagaaaaa gatatactaa attgcatcag gaattgcaga ttaaatgaac acaaaacgat
     3481 tgaaagaaga attggacgca tttaatgcgg aaaataaaaa actcaaaatc acattcggga
     3541 cgcttgtggt tatgggttgg tgtgttttct tgattattat tgcaactttt acccagcttg
     3601 acttttctca ttatgtgccg ggttctttaa atcctgctga cccttcgttt ttaaaactta
     3661 aacactgtgt ttatattccg caaattcctg taatcttctt tattgccgct ttgataggca
     3721 agagattcgg tataacggct gttacaatat atattttact cgggcttact ttttttcctg
     3781 tatttgctct cggcggcgga atagggtata tttttcaata caatttcgga tatattcttg
     3841 catatttgcc cgcaattttt attgtggcat ttaccctcaa agataaattc aattttttga
     3901 ccattgcaaa agcttcacta ctcggtgttt taacaataca tattatcggc gttttctatc
     3961 tgattcttat ggcaatcatc catcaggacc cgttttctca cgttgcgggg tggatttcta
     4021 tgcaaagcgg cgccaaaatg atatatgatt ttgttttcgg atattttgcg atattgcttg
     4081 caaaacctgt aaaacaaata ctatggctgt caatgggata aattattatc ttttacatat
     4141 ttttgcgttt ttaaatccag tataatagca ttgaacattt tttctctctg ctctggagtt
     4201 gcaaatttgt tgttatcaac actattttta atcgcttcca cctctaatgg atcaagctcg
     4261 atttttgacg ggtcaaagtt tgagaggtca ggtttgtaag gatttctttc ttctatgcta
     4321 aaagcagctt gctgcgtgtt ttttgaactg ctccagattt tgtgggaaaa attaatgtct
     4381 gttatctcaa cacccagcgg ttttgaatag atattcattt tctttaaaat atcctgctta
     4441 aacatcaaaa gctctgagct tacagcagca tttgcacaag caaccgtaag aacatgtccc
     4501 tccggagttt gtgtgagtcc gtttgctttt gagtattttt caaatttttt gccggcgact
     4561 tttggccaaa atttaaaaat cgtggcgttt ttcaagccct gcttgagctt agggtttttc
     4621 ataacagcac ccagtatatt ttcaatactg ttaaaatcag agtataaaat ctctttttta
     4681 tccatctttg gcaccgcact cttttttacg aagctgttct attacttttg cagcggtttc
     4741 aaaatcctgc tctgtgtcaa tatccacgca tctgccgcct gtnncttttt gccgataaag
     4801 tcttttacct ctttcattac atcagttttt ataatgtaag ttgctcctgt ttctgtgagc
     4861 atttgaaaat gtttgtcgct gtcctgtctt ctggggcggt ttctgtagtc ataaaggcat
     4921 tcataatgtc cgtcagcggg gtcttttctc cattttgaat gggtaagacc gattactttt
     4981 cccgcaaaaa cagagtcaca gccttgcggc tcattttcta aaaacagctc aaacgcttca
     5041 tcaatttctt tgccgtctct taacgggcaa gttgcctgta acagaatgac aacatctggt
     5101 ttgtacccct gtttttcaag cgtttctacc acctgtaata aaacgggtgc tgtttttgtt
     5161 tcgtcacggg caagctcttc cggtctgtct ataacctcgg caccgagggc aagacaaacg
     5221 tctttaatct ttgagctttc tgtagagacc actgttctgg taatatattt tgagttgtgc
     5281 gcagcttcta ttgtgtacgc cacaagaggt tttccagcta gaggttttat attctttccg
     5341 ggtattcctt tagaacctnn nntgcaagaa cttccattgc tttttgttcc ttgtggatta
     5401 aaaattaatc cagaatttct tctaaaattt tagcgttgtt caaagctttt tgagggcttg
     5461 gcaattttgt tctttttata tagcttctta aagcttctct tacgagttcg cttcttgttc
     5521 tttgttcact tcctgcaacc tggtctattt tgctgaggaa ttcatcgggc attgatacca
     5581 atattcttgc cattttgtct cctttgatta atagtcaact tctttttcag caactttcac
     5641 cctatcatta tacatcaata ggttatattt tctatatcac atggggctaa ttttataata
     5701 atgttacaaa tctattttat tttaaagcca aagccagctt ataaaccttg tttttgttgt
     5761 aaccgtaaag cgtgctgagt atttgagaga tgtctttgtc tgtatatgca gcacttttga
     5821 gtttttttat attttcaatg attttatatt cttcttcatc tgcgttttgg ccggcgtaca
     5881 gcatacaaac aatctcgcct ttaagggtat ttgttttgta ataatcgatt acttcctgta
     5941 cagtgcctgt ttttatctct tcaaacattt ttgtgagnnn nnnnnnncat agcgttttcg
     6001 ctacgggatt ctttaatatt ttcaagtgtt tctatgagtc tttgagcgga ttcatagaat
     6061 acaaggtctg tatttacaaa tttttcaaaa acttttatct gttgattttt tactctgggc
     6121 aaaaatcctg taaaagcaaa ctcttctgtg tctcttggaa tcattgatgt aaatgttgtg
     6181 agagcgcttg ctccgggcac ggaggttatt tttactttgt gtttaaaaag ctcctgaaca
     6241 agaattctgc ccgggtctga tatgcacggt gtaccggcgt cagatatgag ggctattttt
     6301 ttaccctgct ctattaaatt taacagttct gttgttcttt gcttttcgtt aaatttgtga
     6361 taactcacaa gttttgttgt aattccgcag gactcaagaa gattggcact tgttctggta
     6421 tcttcacacg ctattatatc tgcatttttt agagtgtcta ttgcacgcag agtgaaatcg
     6481 gctttgtttc cgataggtgt ggctactata tatacctgtg gttctttatt gttagtcaaa
     6541 agccagcccc tgacgttttc ttgttcttat tttttgcgga ttaccaaaag tcagcatttt
     6601 gtaaaggcct gtttgctcaa acagtcttga gatgtttggt ttcatgtttt ctacatgaat
     6661 ttttatctca ttaaaaaccg caattttttg aagatccaat agtttttcaa tgtccttaag
     6721 gcagatttcg tctacatttg agaaatcaag ctcaagctca ttatcggcac tttgaataaa
     6781 ccctgctgcc ggatattttt tatccagcca ggagtgaatg taaattttct gcattatttg
     6841 caacccaaga ttatattttt aacaatagat atacaataaa tagatatcct caacatcttt
     6901 ataataacag agaaattgac catgccaatt ttttaatatt ttgtaatatt ttttgttaaa
     6961 aagcacccta ttgtttaata agggtgcctc atattttagt attatttttt tataaaagct
     7021 tgagctcttt ttctacatca gcaagcactt tatcgaggtt ggcagcattg gagcctgcac
     7081 cctgtgcaaa gttcggtctt cctccgcctt tgccttctgt tgcagcagca atttctccaa
     7141 cgattttgcc ggcgttaaca cctttttgta caaagttatc ggagacttta accatgataa
     7201 atacaccgcc gtcttttttg agagctgcta ttacaataat gctgttgccg agtttgtcgg
     7261 ataatttttc cacaaactct tttaccattg caggctcaaa gtcttcaatt ttggaaataa
     7321 acaatttgcc gtctttgatt tcctgggttt tgctcaagaa agtagagaat tttgcatttg
     7381 ctatttcttt ttgaagctca accgtgcgtt ttgtcagggt tttgtttgtt tcaataagct
     7441 tgtcaacacg ctcgcctatc tcacctactt gagatttgaa aagatgtgca agtttttctg
     7501 cttcttttgc tctatcgttg agaaatttga acgcagcatc tgcaacaaca acctcaatac
     7561 gtcttgagcc tgctgaaatt gcagattcct gtacaacttt ggcaagtctg atttctgccg
     7621 tgttgtttac gtgcgtaccg ccgcagagct cgcgtgagac aaagttgcct tttttgtctt
     7681 ttactccgac aactcttact ttgtcgccgt atttttcacc gaataaggcc attgctccgc
     7741 attttttagc ttcttcagca tccattacat ctgtgtgctg ctctagccct tgtgaaatcc
     7801 aattgttcat taactcttca acctgctcga tttcagaagc tgtcattgct ctgtcaaaag
     7861 agaagtcaaa acgggttttg tcgggttcta cctgtgaacc ggcctgttta acaccgtcac
     7921 cgagtacctt ttgcaatgct gattgcaaaa ggtgagctgt tgtgtggtgg gctgtgattt
     7981 gttttcttct gtactcatca atagctgcac aaactgtgtc atttgctttt actgtgcctt
     8041 ctgttatttc ggctctgtga gcgtagagat tgtcgacttt gaaggtgttt aaaacttttg
     8101 ctttaaagtt tttgccttca atcacgcctg agtcaccaac ctgaccgccg cattccgcat
     8161 agaaaggtgt tgtgtctaaa ataatatcaa cggtttctcc ttcgtcagca gaatcaattt
     8221 tttgagcgtc ttttacgagt gcaaccactt tgccttctcc gcaagttttt tcatagcctg
     8281 tgaatacagt ctcgcctttt tctttttcaa tatctatata gataaggtcg tcagttaata
     8341 taattttttg agcagctgct tttgctcttt ctttttgctc tttcatgcat tttttaaagc
     8401 cttcttcatc aacggaaatg cctttttctt gagcaatttc aactgtcaat tcaagaggga
     8461 aaccgtatgt gtcatagagt ttgaaagcat tttctccgct gatttctttt gaaccgtctg
     8521 aaagaaggtc atccaaaagt ttttgccctc tatcaagagt ttgtttaaat ttctcttctt
     8581 cttttttaat aacatctttg attttttgac gattttcgtc gagctcaggg taagcttctt
     8641 tgtagttgtc tacaactgta tcaacgatgt tgtaaaggaa aggaagctct aatccaagca
     8701 tttttccgtg gcgaagtgca cgtctcataa tcatacgcag aacgtagttt cttccctcgt
     8761 tacccggcac aatgccgtct gaaatcataa acgatacaca tcttgcgtgg tctgtgatta
     8821 ttcttaaaga aatatctgtt ttgttatcct gtttgtattt tttgcctgtc atttcacaga
     8881 ctttatccaa aataggagtt aaaaggtctg tttcaaatgt ggatgttttg ccttgaacaa
     8941 ccattgcaat tctttcaaga cccatacctg tatcaacgtt tttcttttct aaaggaaggt
     9001 agttgccttc tttgtcttta aatagttctg taaatacaag gttccagatt tctacccacc
     9061 tgtcgcattc acatgtggca acagaacaat catcactgca cttcatatct tcgccaaggt
     9121 catagtgaat ttctgaacaa gggccacagg agcctacgtc tgatacaggg ccccaaaaat
     9181 tgtctttttt accttttctg aatatttttt cggccgggat tccgactttg ttgtgccaga
     9241 tatcaaaagc ttcatcatca tctgtgtaga tagtgatgta tagtctttca gggtctaaat
     9301 gaaggtagtt tgtaacaaag tcccacgccc aaggaataac ttcttctttg taataatcac
     9361 caaaagagaa gttgccgagc atttcaaaaa aagtatggtg gcggggtgtt cttcctacgt
     9421 tttcgatgtc agaatcttta ccgcctgcac gtgcgcattt ttgacaggtt gtgattcttt
     9481 tagggtcata ggggcactct tcgtaaccca ggaaatatgg tacaaactga agcattcctg
     9541 ctgttgtcaa aagtactgtc gggttgtcag gcacaagtga ggagcttttt acgattgtag
     9601 attgatgttt ttcagcaaaa aactttaaaa aagcttcacg aatttgtgcg cctgtaagcg
     9661 gtttatgttg aatttctgac ataacttcat tccttattct taactgtttt atagttaaat
     9721 tttactataa aaagataaga aaaaaagcta aaaatgcgca aaaaaaagct ctaatttatc
     9781 a
//
LOCUS       DABS01000066            4173 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_20127, whole genome shotgun sequence.
ACCESSION   DABS01000066 DABS01000000
VERSION     DABS01000066.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4173)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4173)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4173
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..797)
                     /locus_tag="CPT85_02505"
     CDS             complement(<1..797)
                     /locus_tag="CPT85_02505"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25386.1"
                     /translation="MKTYVYNLHGGSGNDVFNLLNSVALDSIIDCGDGDDTVNNQTSD
                     TASDITLIGGSGTNTLNGKFDSVMISGFGDDVSEAKDVSFAAGETKEITINGKKYKVT
                     NTSTEGNTFQYYYNPLTDQITFGGHKFDIYAQEDVEHDVILKTNQINFYGGNKNDKID
                     ISQVGNFIYGRDGDDTITINSSSSWVDGQNGNDTIIVNKGTWNTIYGSNGDDEIFINA
                     VYNNSFINLGNGNDTYHINYSGTDATMNDLEGDNTYYVNADNTSIASG"
     gene            complement(914..1768)
                     /locus_tag="CPT85_02510"
                     /pseudo
     CDS             complement(914..1768)
                     /locus_tag="CPT85_02510"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    920..949
                     /estimated_length=30
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1938..2405)
                     /locus_tag="CPT85_02515"
     CDS             complement(1938..2405)
                     /locus_tag="CPT85_02515"
                     /inference="COORDINATES: protein motif:HMM:PF00669.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25387.1"
                     /translation="MLSINTDTLNILMQKNLTTAQNAVSQALERMSTGYKVNKAQDNA
                     AGLYIATNMTSQIRGLKQALKNTQDGISYLNVGLGAFENMTTILNRLRDLSVQAANGI
                     YDIDARNAMQKESDELVKQLEQILTSTNFNGQKIFNYPPGSSAARVSTYSGGG"
     gene            2590..>4173
                     /locus_tag="CPT85_02520"
     CDS             2590..>4173
                     /locus_tag="CPT85_02520"
                     /inference="COORDINATES: protein motif:HMM:PRK05667.1-4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="DAB25388.1"
                     /translation="MNGLTYQDVVAQIKDRLDIVDVVSKHVILKKSGGNYWGCCPFHN
                     EKTPSFSVSPAKQIYKCFGCGEGGDVLSFLMKINNQSFAEVVKEQAEILGIELPNNFD
                     KSKDNKDIKEQIYSCMKDAAEFYKKTLLENKTSEAYQYLANRGITDENIETYRLGFAP
                     NAYDALQKFLKVKHNEEIQEKAGLIIKRENGNGFIDRFRNRITIPIFDEKGNIVAFGA
                     RAIEAGQNPKYLNSPETLVYNKSHVLYGLYHAKEAIKEKDSIVIMEGYFDVISAQVNG
                     VKNAVGACGTALTDSHVKLISRYTQSRKIYLAFDTDKAGQMATKRGAEVIKEAFSGLG
                     NIKQFDESFASTSENTDRYSCELRVVVPPEGKDPDEFIRENGAEAYAQVLRQAPLLVD
                     FQIESVLKAYQKGMSPVEKSAIVKEVLPYLLEIGNNIVRDEYVKIVSSRLDITENSLQ
                     KELLNSSGKGLNNTYSQKPKPQTQLAPIVKKSLNISEKAQKNLLSMYLINESSYNIQT
                     LNSILKEVEYTNDTLIIVKD"
BASE COUNT         1282 a          791 c          758 g         1312 t
ORIGIN      
        1 cctgatgcta ttgaggtgtt atctgcattt acgtagtatg tgttatcgcc ttcaaggtcg
       61 ttcatggttg catctgtacc cgaatagttt atgtggtagg tatcattgcc attaccaagg
      121 ttaataaatg aattgttata aactgcatta ataaaaatct catcatctcc attactgccg
      181 taaatagtat tccaagtacc tttgttcaca ataatcgtgt cattgccgtt ttgcccatcc
      241 acccagctgg atgaactatt tatggttatg gtatcatcgc catctctacc ataaataaaa
      301 ttacctacct gcgaaatatc tattttatcg tttttgttac ctccataaaa atttatctga
      361 tttgttttca agatgacatc gtgttcgaca tcttcctggg cataaatatc aaacttatga
      421 ccgccaaagg ttatttggtc tgtcaaaggg ttatagtaat attgaaaagt atttccttct
      481 gtagaagtat tcgtaacttt atactttttg ccgttaatgg tgatttcttt tgtttctcct
      541 gcagcaaaag aaacatcttt tgcttctgac acatcatctc caaacccaga aatcattaca
      601 gaatcaaact taccattaag agtgttggtg ccagagccac ctattaacgt tatatcagat
      661 gccgtatctg aagtttgatt gttaacagta tcgtcaccat caccgcaatc aataatagaa
      721 tcaagagcaa cagaatttaa aagattgaaa acatcgtttc cgctgccgcc gtgcaaatta
      781 tacacataag ttttcaaatc aaacgtatca tcaccatctc cgcctgatat aatagaatta
      841 gtagaactag accccgcatt tataacaatg tgatcattac caccttcacc atttattgta
      901 gaggtagagt tattcagaan nnnnnnnnnn nnnnnnnnnn nnnnnnnnna attttatccg
      961 ccaggttgcc gccataaaaa gtcatgtacg agccttggag caccacatta tgtgctttgg
     1021 tttcttcccc cctgacagtg aaatttgtac cctgaaaagt aatggaaccg tcatcattga
     1081 tgtaataaat cagtgaagat tctttatctg ctttgactgt atatttaata ccgttaatta
     1141 aaatctcttt tgtttgatta gcaacaaaat ctacggaaaa aatatttccc ccgacaatat
     1201 cagaagctac tacattgaca ggtttgtctc ctacaagtgt gttgctgccc tcgccgccca
     1261 ctatcgtgaa ttttgaattc ttgcctgcat tagttaaatc aaaaatatca tcacctgcat
     1321 cgccgtagaa aaacgacatt gaagaagtga tctctccaag tataaactta tcattgccat
     1381 ctccgcctct gatagttccg gattgtgaaa caacaaatgt atcatcgcca ccttcgccat
     1441 aaactgtagc aaaagagttg cttcctattt tttcataata atcatcacca tcaccaagtc
     1501 tagtggtaga ctgataggat tcgtcatata ctttatcgtt gccgccgttt gttgcaacat
     1561 tggtagctct tgctgcttct gttaatctta tggtatcgtt tctatcaccc gttgatacgg
     1621 tattgttata gccgtttata ataagattat actgaacatc agagcgccct gttatttcaa
     1681 agtagcttga gttaatagta atttcgcctg ttgttttatt ttttgaatag ctgaaagatt
     1741 gcgcagatga ttttttattc tttaccaaaa actctacgcc atcaataata actgtttgag
     1801 aggcattacc ctgaacttct actgatccgt ctattgtatc atctgctgct gcaagagtat
     1861 ttatggggtt tgaatttgtt gttgcaaaag attcattttt aatgcgaaat cctgcttgct
     1921 gaatattttt aagcggttca gccccccccc gagtaggtgg aaactcttgc ggcgcttgag
     1981 ccgggaggat aattgaatat tttttggccg ttaaaatttg ttgaagttaa tatttgttcc
     2041 agttgcttga ccaattcatc tgattctttt tgcattgcat ttcttgcatc tatatcatat
     2101 attccgtttg cggcttgtac tgatagatct cttaacctat ttaagattgt tgtcatattt
     2161 tcgaatgcgc caaggccgac gttcagatat gagattccgt cttgggtatt tttgagggct
     2221 tgttttaggc ctcggatttg ggaggtcata tttgttgcaa tatacagacc tgcggcattg
     2281 tcttgggctt tgtttacttt gtagcctgta ctcattcgtt ccaatgcttg ggacactgca
     2341 ttttgggcag tggtcagatt tttttgcatt aatatattta gtgtatcggt gttaatgctt
     2401 aacaataagc ttcaccgcct ttttcctgtt tcttttgcat ttatcccttt ttgtgccgct
     2461 tcgcgaatat ttatggcact tttttctttt tttagtttaa ttcatttttt gataaatatg
     2521 atttatactt ttgcataatg tttattaaag ttaagtataa aattgtctta tgctataata
     2581 tttaccaaga tgaatggttt aacttatcaa gacgttgtag cacaaataaa agacagactg
     2641 gatatcgtag acgttgtctc caaacacgtc atccttaaaa aatcaggagg caattactgg
     2701 ggatgctgcc cttttcataa cgaaaaaaca ccttctttca gcgtaagccc ggcaaaacaa
     2761 atttacaaat gctttggctg cggtgagggc ggtgatgttt tgagcttttt gatgaaaata
     2821 aacaaccagt cctttgccga ggtagtaaaa gaacaggcag aaattcttgg tattgagctg
     2881 ccaaacaact ttgataaatc aaaagataac aaagatataa aagagcaaat atactcttgc
     2941 atgaaagatg ctgcggagtt ttataaaaaa acgcttcttg aaaataaaac gtccgaggct
     3001 tatcaatacc ttgcaaacag agggataaca gacgaaaaca tagaaacata taggctcggc
     3061 tttgcaccta atgcttatga tgctttacaa aaatttttga aagtaaaaca taatgaagaa
     3121 attcaagaaa aagccggact gataatcaag cgggaaaatg gaaacggttt tattgacaga
     3181 ttccgcaaca gaatcacaat ccctattttt gatgaaaaag gaaacattgt agcattcggc
     3241 gcgcgtgcaa tagaagcagg acagaacccc aaatacctta attccccaga gacccttgtt
     3301 tacaacaaaa gccatgtact ctacggcctg tatcatgcaa aagaagcaat aaaagaaaaa
     3361 gactctattg taattatgga aggatatttt gatgtaatat ctgcacaggt taacggggta
     3421 aaaaatgccg tcggagcttg cggaacagcg cttactgaca gccatgtaaa gcttatctca
     3481 agatacaccc agtccagaaa gatttacctt gcttttgaca cggacaaagc aggacagatg
     3541 gcaacaaaaa gaggtgcaga agtaatcaaa gaagcgtttt cagggctagg taacataaaa
     3601 cagtttgacg aaagctttgc atcaacttcc gaaaacacag acagatactc ttgcgagctt
     3661 agggtagtag taccgcctga gggcaaagac cctgatgaat ttatcagaga gaacggcgca
     3721 gaagcttacg cccaggtgtt gagacaagcg ccgctgcttg tggattttca aatcgaaagc
     3781 gttttaaaag cttatcaaaa aggcatgtca ccggttgaaa aaagcgctat tgttaaagag
     3841 gtgcttccat atcttcttga gataggcaac aacattgtta gagacgagta tgtaaaaata
     3901 gtatcttccc gattggatat tacggaaaat tctttgcaaa aagagctgct taactcatcg
     3961 ggcaagggtt tgaataacac ttattctcaa aaaccaaagc ctcaaaccca gcttgcacca
     4021 attgtaaaga aatctttaaa tatttcagaa aaagcgcaaa aaaatttatt gtcgatgtat
     4081 ttaataaatg aaagttccta caatatccaa acattaaaca gcattttaaa ggaagttgaa
     4141 tatacaaacg atacgttaat aattgtaaaa gat
//
LOCUS       DABS01000067            2706 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13866, whole genome shotgun sequence.
ACCESSION   DABS01000067 DABS01000000
VERSION     DABS01000067.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2706)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..192
                     /locus_tag="CPT85_02525"
     CDS             <1..192
                     /locus_tag="CPT85_02525"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25380.1"
                     /translation="KTTLEFEIDLKKLISVITLNHNDAEREVLNNLNKFEHMEFLGLR
                     DKNGQIIYFGDILXINRRI"
     assembly_gap    173..174
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            200..457
                     /locus_tag="CPT85_02530"
     CDS             200..457
                     /locus_tag="CPT85_02530"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25381.1"
                     /translation="MTPVCEISHGEHILFFKPIKFLNKKIGIGCKSTYSNTLEVIGNI
                     YKNSQLFSGLKAKNILTKLIRTSKNSEILTTTLKIELNHII"
     gene            512..598
                     /locus_tag="CPT85_02535"
     tRNA            512..598
                     /locus_tag="CPT85_02535"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:546..548,aa:Ser,seq:gga)
     gene            645..1256
                     /locus_tag="CPT85_02540"
     CDS             645..1256
                     /locus_tag="CPT85_02540"
                     /inference="COORDINATES: protein motif:HMM:PF00657.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25382.1"
                     /translation="MKKVLCFGDSNTYGYCPGRAIRYDKNSRWSGILKQLCDGKFEII
                     EAGCNNRTAFSDNPAGIDQTGYKVLPNLLQQNPDYIILAIGLNDLQYSYAPTLQQVED
                     GIKLLIRIIKETCPCAKIVLAAPSVITTDILHSYFINLFDMDSIEKSKHLPAIYKTIA
                     QSEDCIFIDLNKIAKVSEADGLHYKAEEHQKIAQAMFELLNNN"
     gene            complement(1253..2236)
                     /locus_tag="CPT85_02545"
     CDS             complement(1253..2236)
                     /locus_tag="CPT85_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012995318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[FeFe] hydrogenase H-cluster radical SAM
                     maturase HydE"
                     /protein_id="DAB25383.1"
                     /translation="MFSKKEIIDLLKDDTQNQWLFSYADNVRKQYVGDRVHLRGLIEF
                     SNICKCHCKYCGLRCENKTVERYRIMPDDIMLHAQRAVQMGYKTIVLQSGEDSYFTRD
                     VMCKLIENIKTLDVALTLSIGEKSYDDLKAYKQSGADRYLIRIETTDKNLYKKMHPYM
                     DFEKRMQCLKDLKKLGYETGSGCLVGLPEQTVESLADDILFFKELDADMIGIGPFIPH
                     PDTPLKDCAQGNFILALKVMAIVRIMLKNINIPATTAMETLNPNGRLIALQSGANVVM
                     PNVTSTEYRAKYEIYPDKICINDQPSKCRNCIETKIKSXREIAKDYGFRSS"
     assembly_gap    1292..1293
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2306..>2706
                     /locus_tag="CPT85_02550"
     CDS             2306..>2706
                     /locus_tag="CPT85_02550"
                     /inference="COORDINATES: protein motif:HMM:PF13411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="DAB25384.1"
                     /translation="MYTIKEVSNIMDVSEHTLRFWAKSGFFPFIKRDENNIRLFSQSD
                     LEWVKIVKCLRSVGTENKAIKRYIDLCIIGDSTIKERFEIIKATKQKAQQQMNDLKKQ
                     LDILEYKEGYYKNLIKNNSSDAWNPMNNLQE"
BASE COUNT          947 a          477 c          452 g          826 t
ORIGIN      
        1 aaaactacgc tggaatttga gattgattta aaaaaactta tatccgtaat taccctgaat
       61 cacaatgacg cagaacggga agtattgaat aatctcaaca agtttgagca catggagttt
      121 ttgggattaa gagacaagaa cggacaaatt atatactttg gagacatatt aannattaac
      181 agacgaattt aacaatcttt tgacacctgt ttgtgaaatt tctcatggag aacatatttt
      241 attttttaag ccaattaaat ttttaaacaa aaaaataggt atagggtgca aatcaaccta
      301 cagtaatact cttgaggtaa taggaaatat atataaaaat tcccagcttt tcagtggctt
      361 gaaagcaaaa aatattttga caaaacttat acgcacatca aaaaattcgg aaatactgac
      421 aacaacctta aaaattgagc ttaaccatat aatttagttt acacttgatg aaaaacattt
      481 agctgtttat aatagttaag aatcattcaa tggagaggtg tccgagtggt ttaaggtgca
      541 aacctggaac gtttgtgtgg gggcaactcc accgggggtt cgaatccccc cctctccgat
      601 ttttcctctt tattacaata aacaatgcgg atgaaagagt tattatgaaa aaagtcctct
      661 gttttggaga cagcaatact tatggttatt gtcctggcag agcaatacgc tatgacaaaa
      721 acagccgttg gagcggaata ttaaagcagc tttgtgacgg aaagtttgaa attatagaag
      781 caggctgcaa taacaggaca gcttttagtg acaatccggc aggaattgat cagactggat
      841 acaaagtttt acctaattta ttgcagcaaa atccggatta cataatcctg gccattggac
      901 ttaacgacct tcaatacagc tacgcaccaa cgcttcaaca ggtagaagac ggaataaaac
      961 tcctgataag aattatcaag gaaacttgtc catgtgcaaa aattgtactc gctgcaccgt
     1021 ctgtaattac aacagacatt ttacacagtt attttataaa cctttttgat atggattcta
     1081 ttgaaaaatc aaagcacttg cctgcaatct ataaaaccat tgcacaaagt gaagactgta
     1141 tttttattga cttgaataaa atagcaaaag tatcagaagc tgacggcttg cactataaag
     1201 cagaagaaca tcaaaaaatt gcacaggcta tgtttgagct cctaaacaat aattaagaag
     1261 aacgaaaccc ataatccttc gcaatttcac gnntggattt tatctttgtt tcgatacaat
     1321 tcctgcactt tgagggttgg tcattaatac atattttgtc aggataaatt tcgtatttag
     1381 ctctgtattc agtggatgta acatttggca taacaacatt agctccgctt tgcaaagcaa
     1441 tcaatcttcc gttcgggttc aaagtttcca ttgcagtagt tgcgggaata tttatatttt
     1501 tcaacataat tctaactatt gccatcactt ttaaagcaag gataaaattt ccttgcgcac
     1561 aatcttttaa tggagtatca gggtgtggaa taaaaggccc tattcctatc atatccgcgt
     1621 caagctcttt aaaaaacaat atatcatcag caagagattc cacagtctgt tcaggcaaac
     1681 ctacaagaca gccggaacct gtttcatatc caagtttttt taaatccttg agacattgca
     1741 ttcttttttc aaaatccata tacggatgca tttttttata caaattttta tcagttgttt
     1801 ctattctgat aagatacctg tctgcaccgc tttgtttgta tgcctttaag tcatcataag
     1861 atttttcgcc gatacttaat gtgagagcta catccagggt tttaatattt tcaataagct
     1921 tacacataac atctcttgtg aaataactat cttctccgga ttgaagcaca attgttttat
     1981 agcccatttg tacagctctt tgagcatgaa gcataatatc atcaggcatt attcggtatc
     2041 tttcaacagt tttgttttca cagcgcaaac cgcaatactt gcaatggcac ttacaaatgt
     2101 tagaaaattc aattaaacct ctaaggtgaa ctctatcacc aacatattgt tttctcacat
     2161 tatccgcata agaaaacagc cactgatttt gtgtatcatc ttttaataaa tcgataatct
     2221 ctttttttga aaacatacag ttattataca ggagttaaaa aaagtataaa gtcttttgtg
     2281 ctagtataaa attatggagg ttaatatgta cacaataaaa gaagtttcta atattatgga
     2341 cgtatcagag cacactctca ggttttgggc aaaaagcggt tttttccctt tcataaaaag
     2401 ggatgaaaat aatatacgac ttttttcgca aagcgacctt gagtgggtaa aaattgttaa
     2461 atgcctgaga agtgtcggaa ccgaaaacaa agctataaaa agatacattg acctttgcat
     2521 cataggcgat tccactataa aagaacgttt tgaaatcatc aaagccacaa aacaaaaagc
     2581 tcaacaacaa atgaatgact tgaaaaaaca gcttgatatt ttggaataca aagaaggata
     2641 ttacaaaaat cttataaaaa ataattcaag cgatgcatgg aaccccatga acaacttgca
     2701 ggaaga
//
LOCUS       DABS01000068            8582 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_23238, whole genome shotgun sequence.
ACCESSION   DABS01000068 DABS01000000
VERSION     DABS01000068.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8582)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8582)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8582
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..937)
                     /locus_tag="CPT85_02555"
     CDS             complement(<1..937)
                     /locus_tag="CPT85_02555"
                     /inference="COORDINATES: protein motif:HMM:PRK05702.1-4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="DAB25311.1"
                     /translation="MGDEDKQFEASHQKLEKARKEGQVVKSKDFSMAIAMVVMFFAIA
                     KLSPFIFDQISRLFVLCYQQIPNQHLQVIGLPYLLFITLVPTILIIGPILALAMFIAI
                     LGDFIQVGPLFTTTPLAPKLDKLNPTKYFKNIMSVKTLFELVKNIVKVAILGYIGWVV
                     YKSHFDIILGLAAMDNHFAIMQEFGALIMDFIIKASIAFLIIAAADYGMTRWKFLQDQ
                     KMSFKEVKDEYKNTEGDPNVKAALRQRRQQMMQQGMMDAVPDADFVVTNPTHIACALK
                     YDQEEMESPKLVAKGTELFAKKIIDIAREHGVPVVE"
     gene            1087..3543
                     /locus_tag="CPT85_02560"
     CDS             1087..3543
                     /locus_tag="CPT85_02560"
                     /inference="COORDINATES: protein motif:HMM:PRK00629.4-2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="DAB25312.1"
                     /translation="MKISLEWLNEFVDLTDTTPEQIAHELTMSGLEVEEIEKTGPKFS
                     NIKTAQIKLIENHPNADKLHLVTVDLGNETKTVVCGAQNIQEGQIIPYASVGSKVLDR
                     KTGEQFELTPAKIRGVESQGMLCSQDELGLEGLQEEDGILILNRLYDDIKLGTPVEKL
                     LNIKEDIVLDVAPTANRGDEMSVIGVARELCAIFNKKLQFSPLQSTQDNSTDKFEVEI
                     IDKEGCKYYSAGLLKDVVIKPSPEWMQRRLTACGIRAINNVVDITNYVLLEYGCPLHA
                     FDKDKLNGYLCVRRAKENETIVTLDEIERKTNSDTVLIATKEQAVCVGGVFGSANSEV
                     DKNTKNIVLEAAYFTPAQNRRSARSIGYRSEASARFERGIDIEMVKPALLRAMQLLVD
                     LADAKVDGIVETGDNKLPEIDITLRFAQIKRILGTEIPVEKCVEIAQNLGFELLGKNE
                     IAAKFKVPSFRRNDVYREIDLIEEISRIYGYDKIDPTLPKNTQSAEISEESRILKKVS
                     NMLLGKGFMEAVTSSLVGEPLYKEFCVEFNDEKAVKVCNPQSEDHTMLRQSLIPSVLN
                     VVKTNLSNGQKDFSIFETGRTYFIERETDEKDSGVTERRILAGAMTGDINNEKWIKKP
                     VLDFFSVKGVVQNLLELLGLENRVQFRPCNDKAFLHPGKSAKLVMLGKQPMEVGFFGE
                     IHPILKDKEKFQQNVYVFEINLEELLKAVHTSTVRYKKLSQFPEVQRDLAFIVPESVS
                     HEEIAKIIKKSVKQNLFNGEELFDIYQGEHIQDGFKSMAYRIKMQDKDATLTDETVEE
                     QMTSIRNNLKKSISELSFRE"
     gene            3547..4782
                     /locus_tag="CPT85_02565"
     CDS             3547..4782
                     /locus_tag="CPT85_02565"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25313.1"
                     /translation="MTTNNEQLVKDLTAKDETKAFAAAQCIINNADTQAFSLLCDKSE
                     FLFDFVKNNVNKRLQKAVNEGNFRNLFAFLKHYCPDFEDTIIGGIARFANEDLTDEML
                     ELLENGSDDEKAYAAKYFSYIPDTIAADDLTEYAFSDNEAVAFNSAKALGAMKIDSAY
                     QKALELLESDDEFTVLKAVKFLVAYEDKAAVEHILKAMEHSSMSENIAGEIPYIQSLM
                     ELLQQYEDKNYVLLCIDNILSGLGEILPLSQIFCFEMFEVLEYLIPYNTNNKNPQAAV
                     VLLKALSKFEELANNEEYTFDEDKNTKQEIQDIYNLLKKQQEYFWNAQKNLVKNELDE
                     SNVPVYRISSALSVICEYNLVQAEDEIKNLLHSNNEILLCEAASALKQIGRLDCAQKE
                     SILAKVHDENKKALINSLF"
     gene            4784..5548
                     /locus_tag="CPT85_02570"
     CDS             4784..5548
                     /locus_tag="CPT85_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009336672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase TatD"
                     /protein_id="DAB25316.1"
                     /translation="MLIDTHTHIDMDNFKDRFDEVLKTAAEYGVKKVVIPGVEPAGFS
                     RIVELCEKYDNVYGAVGVHPEEVGAFDEKAESLMREYLKHPKIIAVGEVGLDYYWDKS
                     QIERQKEIFERQILIAKDAKKPVLVHDREAHLDTFEILKKTNAKETGVVMHCFSGSPE
                     FALECVKEGFYIALGGVVTFKNAKKVKEVAKVVPLEKLLLETDAPYMTPVPYRGKENQ
                     PAYVKFVAQEIASIRNISFEEVANATTANAKRLLGI"
     assembly_gap    5691..5741
                     /estimated_length=51
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5742..6415
                     /gene="holA"
                     /locus_tag="CPT85_02575"
                     /pseudo
     CDS             5742..6415
                     /gene="holA"
                     /locus_tag="CPT85_02575"
                     /inference="COORDINATES: protein motif:HMM:TIGR01128"
                     /note="too many ambiguous residues; incomplete; missing
                     start; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
     assembly_gap    6402..6411
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6548..7492
                     /locus_tag="CPT85_02580"
     CDS             6548..7492
                     /locus_tag="CPT85_02580"
                     /inference="COORDINATES: protein motif:HMM:PF13177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25314.1"
                     /translation="MFHPILKRKFEYVTNYFETAIKNEKRSFAQSIVLYGQDIAAQYY
                     LAMEIARQLNCMKDADPACDCLNCSWIRNNQHPAVLTVSKNDNKPSDDTSSKVISIKQ
                     TLMINNSLINSSDYYRVFIFCDSEIGEMNEFEKKHIQDFGGLNFKFPQENWIPKPLNR
                     DVLIEASANSLLKSIEEPPERTLFLFLTEDKEDIIETIISRSQSFYVPSFNAQSYDTE
                     FLTAVLADYPAIKKINVINTAAVLLEAMQEHDYKVEYVLDCMEFYLAQMIKRNLNNKM
                     LVQKIKKDISKIQHAKKQAQAYIKPQLIIEDLLFSFAF"
     gene            complement(7831..8577)
                     /locus_tag="CPT85_02585"
     CDS             complement(7831..8577)
                     /locus_tag="CPT85_02585"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25315.1"
                     /translation="MKELLSDTFEYKGQRPDTILLKDLKTGKPVEAKVKLSSKKNHYE
                     PSVTVETIELVDKFGKSIGSKEYSIKPASDKKLFMITGEMNTHRQDLAGVGFRLDQMH
                     IERAVQLGIEKIPRVALPKAILYHTKMGFLPDRGEEYYVQIKNSNQIMPALEKHFERL
                     AGEIPISSFVPIVIEKCGKFFIDMNTTAAVTTIEQCKNRIERTNAHRLLSFNTVSTNM
                     SLKGKELDHWKELLKDHPILSKLYQKFPEY"
BASE COUNT         2771 a         1586 c         1739 g         2425 t
ORIGIN      
        1 tttccactac aggcactccg tgctcgcgtg ctatgtctat aatttttttt gcaaaaagct
       61 ctgtaccttt ggctacaagc tttggggatt ccatttcttc ctgatcatat tttagcgcac
      121 aggcaatgtg ggtggggttt gttaccacaa aatccgcatc aggcacagca tccatcatac
      181 cctgctgcat catctgctgt ctgcgttggc gcagtgctgc ttttacattg gggtcacctt
      241 cagtgttttt gtattcgtct tttacctctt taaaagacat cttctggtct tgcaaaaatt
      301 tccatcgggt cataccgtaa tctgccgcag caataatcaa aaaggcaata ctggccttta
      361 tgataaagtc cataatcaat gcaccgaatt cctgcatgat ggcaaaatgg ttgtccattg
      421 cagccagtcc gaggattatg tcaaagtgag atttgtatac cacccagcct atgtagccta
      481 atattgcaac ttttacaatg tttttcacaa gctcaaaaag cgtttttaca gacattatgt
      541 ttttaaaata ttttgtaggg ttgagtttgt cgagttttgg cgcaagcggt gtggtggtaa
      601 aaagcggtcc aacctgtata aagtccccga gtattgcaat aaacattgca agtgcaagaa
      661 tcggcccgat tatcaaaatt gtaggcacaa gcgtaataaa tagcagataa ggcagtccaa
      721 taacctgcaa atgctggttt ggaatctgct gatagcacag cacaaagagc cttgatatct
      781 ggtcaaaaat aaacggcgaa agttttgcga ttgcaaaaaa cattacaacc attgcaattg
      841 ccattgaaaa atcttttgat tttacaacct gaccttcttt tcttgctttt tccagttttt
      901 ggtgcgatgc ctcaaactgc ttgtcttcat cacccatggg gcgggttcct taatattttg
      961 taatctaacc aaactcaaca gtaatatatt accatgaaat attatctaca tacacaaaca
     1021 tgacattatg ttctctttat tataaaattc ggttatggat attaattaaa aaggacataa
     1081 tcgattatga aaatttcact ggaatggctt aatgaatttg ttgatctcac agacactaca
     1141 cccgaacaaa ttgctcacga actgactatg agcggtttgg aagtagaaga aattgaaaaa
     1201 acaggcccga aattttcaaa tataaaaaca gctcaaataa aacttataga aaaccatcct
     1261 aatgccgata aactgcacct tgtgacagtt gacctcggta atgaaaccaa aactgttgtt
     1321 tgcggcgcgc aaaatataca ggaagggcaa attatccctt atgcttctgt aggttcaaaa
     1381 gttttggaca gaaaaacagg tgaacagttt gagctcactc ccgcaaaaat cagaggtgtg
     1441 gaatctcaag gaatgctgtg ctctcaagac gagctggggc ttgaaggatt gcaggaagaa
     1501 gacggaatcc ttattttgaa cagattgtac gacgatatca aattaggcac tcctgttgaa
     1561 aaactgctca atattaaaga agacattgta ctggatgttg cacccactgc aaacagaggg
     1621 gatgaaatgt ctgttatcgg ggttgcaaga gagctttgtg caatatttaa caaaaagctg
     1681 caattctcac cgcttcaaag cacacaggac aattcaacag acaaattcga agttgaaatt
     1741 attgataaag aaggctgcaa atactacagc gcaggtcttt taaaagacgt agtgataaaa
     1801 ccgtcgcctg aatggatgca aagacgcctc actgcatgcg gtatccgtgc cataaacaac
     1861 gttgttgata ttacaaacta tgttctttta gaatatggct gcccgctgca cgcttttgat
     1921 aaagacaaat taaacggcta tctttgcgtg agacgtgcaa aagaaaacga aacaatcgtt
     1981 acactcgatg aaatcgaacg taaaacaaac agcgatacag tgctgattgc aacaaaagag
     2041 caggctgtct gcgtgggcgg tgtttttggc tctgccaaca gcgaagttga caaaaacaca
     2101 aaaaatatcg tgcttgaagc cgcctacttt acaccggctc aaaacagacg ctctgcaaga
     2161 agcataggct accgaagcga agccagcgca agatttgaac gcggaattga tattgaaatg
     2221 gttaaacccg cactgcttag agcaatgcag cttttagtgg accttgcgga tgcgaaagtt
     2281 gacggtattg tagaaacagg cgacaacaaa ctgccggaaa tcgatattac tttaagattt
     2341 gctcaaatca aacgtatttt aggcactgaa atccctgtgg aaaaatgtgt tgaaattgca
     2401 cagaaccttg gctttgagct ccttgggaaa aatgaaatcg ctgcaaaatt caaagttccg
     2461 tctttcagaa gaaacgatgt gtacagagaa atcgatttga ttgaagagat ttcaagaatt
     2521 tacggctatg acaagattga ccctaccctg ccgaaaaata cccagtcggc tgaaatcagc
     2581 gaagaatcaa gaattttgaa aaaagtttct aacatgcttc tgggcaaagg ttttatggaa
     2641 gcagttactt catcactcgt tggagagccc ttgtacaaag agttctgtgt agaatttaat
     2701 gatgaaaaag ccgtaaaagt atgcaacccg cagagtgaag accacacaat gcttcgccag
     2761 tcactgattc cgagtgtttt gaatgttgtt aaaacaaacc tttcaaacgg acaaaaagac
     2821 ttttctattt ttgaaacagg aagaacatac tttatcgagc gtgaaaccga tgaaaaagat
     2881 tccggcgtaa cagaaagaag aattctcgca ggtgccatga caggtgatat caataacgaa
     2941 aaatggatta aaaaacctgt gcttgatttc tttagtgtaa aaggcgttgt gcagaatctt
     3001 cttgagcttc tggggctgga aaacagagtg cagtttagac cttgcaatga caaagcgttt
     3061 ttgcatcccg gtaaaagcgc aaaactcgtt atgcttggca aacagcctat ggaagttggt
     3121 ttctttggtg aaatacatcc tattttgaaa gacaaagaaa aattccagca aaatgtatat
     3181 gtgtttgaaa taaaccttga agagctttta aaagcagtgc atacatctac agtaagatac
     3241 aaaaaacttt cacaattccc ggaagtgcaa agagaccttg catttatcgt acccgagagt
     3301 gtgtctcatg aagagattgc aaagattatc aaaaagtctg taaaacaaaa tcttttcaac
     3361 ggtgaagagc tctttgacat ttatcagggc gagcatatac aagacggttt taaaagtatg
     3421 gcgtacagaa tcaaaatgca agacaaagat gccacgctga cagacgaaac cgttgaagaa
     3481 caaatgactt cgattcgaaa taaccttaaa aaatcaattt ccgaattaag ctttagagag
     3541 taatttatga caacaaataa cgaacaactt gttaaagacc tgaccgcaaa agatgaaaca
     3601 aaggcttttg cggctgcgca atgcataata aacaatgctg atacacaggc attttcgctt
     3661 ctttgcgaca aaagtgagtt tttattcgac tttgtaaaaa ataatgtgaa taaaagactg
     3721 caaaaagccg tgaatgaagg caatttcaga aacctctttg cgtttttgaa acactactgc
     3781 cctgattttg aggatacaat cataggcggc attgctcgct ttgcaaacga agatttgaca
     3841 gacgaaatgc ttgagctgct tgaaaacggc agtgatgacg aaaaagcata tgcagcaaag
     3901 tatttttcct acatacccga tacaattgca gcagatgacc ttacagagta tgcgttttca
     3961 gataacgagg cagttgcttt caactctgca aaggctctcg gggcaatgaa aattgattct
     4021 gcttatcaaa aagctcttga gcttttagag tcagatgacg agttcacagt gctcaaggct
     4081 gtgaaattcc ttgttgcgta tgaggataaa gccgctgttg aacatatctt aaaggcaatg
     4141 gaacactctt ccatgagcga aaatattgcg ggagaaattc cctatatcca gagtcttatg
     4201 gagcttttac aacagtatga ggacaaaaat tatgtcctgc tttgtatcga caatatcctc
     4261 tcggggctgg gcgagattct gccattgagc cagatattct gctttgagat gtttgaggtg
     4321 ctcgagtatt tgattcctta caacacaaac aataaaaatc cgcaggcagc cgttgtgctt
     4381 ttaaaagccc tgtcaaagtt tgaagagctg gcaaacaatg aggaatacac ttttgacgag
     4441 gataaaaata caaaacagga aattcaggat atctacaacc tgttgaaaaa acagcaggag
     4501 tacttttgga atgcacagaa aaaccttgtt aaaaacgagc ttgatgaatc aaatgttccc
     4561 gtgtatcgca taagcagcgc gttaagcgtt atttgcgagt acaatcttgt gcaggcagaa
     4621 gatgaaataa agaacctttt gcactccaac aatgaaattc ttttatgcga ggcagcttcc
     4681 gctttaaaac aaataggcag actcgattgt gcgcaaaaag aatcaatcct tgcaaaagtc
     4741 catgacgaaa acaaaaaagc acttatcaac agtttatttt aatatgctca tagacacgca
     4801 cacacatatt gatatggata attttaaaga ccggtttgac gaagtactca aaactgcggc
     4861 tgagtacggg gtgaaaaagg ttgttatccc cggtgtggaa cctgctgggt tttcgcgtat
     4921 tgttgagttg tgcgaaaaat atgacaatgt atacggtgct gtcggggttc atcccgagga
     4981 agtgggtgct tttgatgaaa aagctgaaag tttaatgcgt gaatatctca aacacccgaa
     5041 aatcattgca gtgggcgagg tggggcttga ttactactgg gataaatcac agattgaacg
     5101 acagaaagag atttttgaac gtcagatttt gatagcaaaa gatgccaaaa agcctgtact
     5161 tgtgcatgac agagaggctc atcttgatac atttgagatt ctgaaaaaaa caaatgcaaa
     5221 agaaaccgga gtggtaatgc attgtttttc cggaagtccg gaatttgcgc tggagtgcgt
     5281 taaagaagga ttttatattg cacttggcgg ggttgtgact tttaagaacg ccaaaaaagt
     5341 aaaagaggtt gcaaaggttg tgccgcttga aaagttactt ttggaaaccg atgcgcccta
     5401 tatgacacct gtgccctatc gcggcaaaga gaaccagccg gcttatgtga agtttgtggc
     5461 acaggagatt gcttctatta gaaacatcag ctttgaagaa gtggcaaatg ctaccacggc
     5521 taatgcaaaa aggcttttag gtatatagct gttttatttt taaatcccaa ctatgctaaa
     5581 atataaccat gctgtatttt tatcacggac aggaagatta tcttatagag cttgagcttg
     5641 aatcgctcaa gtccaaagtc gtggacaagt cgtttttgtc tacaaactaa nnnnnnnnnn
     5701 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nttggcaatg tgcttgctgt
     5761 tgtgaactgt gaaaaatact tttttgacac aaaaggcaag ataaactttg aagacaaaga
     5821 gctcaaacaa attgaagaag ccatccagtc aatgcctgag agcctgcatg tggtttttgt
     5881 gtgcagaata gaacgcggca gcacaaaaaa aatcgacaca cgaagaaaaa tctataaaat
     5941 catctctaaa aatgcttcaa catcagaatt tgcagaattt aaaccttacc agaaagaact
     6001 tgcttcgtgg attcaaaaac aggttaagaa aaaagagctt atgatggcgt ctgatgttgt
     6061 gcagtttttg attgagcgcc ttggcaccaa ccttcgggtg attgataacg agcttgaaaa
     6121 gctcaagttg tccgtttatc cggaaaaaaa tataaaaaaa gaacacataa aagatatctg
     6181 tacatcaaca gaggatattt ttcttttgtc cgattatatt ttgaaaggcc aaaaagacct
     6241 tgcgcttttg gagtttaaaa aactgtgcac taacaagcat taccttgaga ttcttgcggt
     6301 tttgcaaacc agtttttcca gactggctgc tatgaaggtt gattctgttg ataaaagctc
     6361 gtttgaaatt gcatctaaaa cccatatgaa cgaatttatt gnnnnnnnnn nttgaaaagc
     6421 tgcgcaatgt gcccatggac aggattatac aaataagaaa gaatctgctg gaggctgaat
     6481 acagggtaaa aacaggtgaa atggcttttt atgaacttcc gatagaactg gggcttctgg
     6541 ggtaattatg ttccatccga tattaaaacg aaaatttgaa tatgtcacaa actattttga
     6601 aactgcaata aaaaacgaaa agcgcagctt cgctcaatcg attgtgctct acggtcagga
     6661 tattgcggca cagtattacc ttgcaatgga aatagctaga cagctgaact gtatgaaaga
     6721 cgcagacccc gcctgtgact gccttaattg cagctggata cgcaacaatc agcaccctgc
     6781 tgttttgact gtttcaaaaa acgataacaa accttctgac gatacttcaa gcaaggttat
     6841 ctcgataaaa caaaccctta tgattaataa cagccttatc aattcatctg attattacag
     6901 ggtgtttatt ttttgtgatt cggaaatcgg agaaatgaat gagtttgaaa aaaaacatat
     6961 tcaagacttt ggcgggctta atttcaagtt tccgcaagaa aactggatac caaaaccgct
     7021 caacagagat gtacttatag aagcttctgc aaactctctg ctaaaatcca ttgaagagcc
     7081 gccggagcgc acgctgtttt tgtttttgac agaagacaaa gaggacatca tagaaactat
     7141 tatttcgcgc tctcagagtt tttatgttcc gtcatttaat gcacagagct atgatactga
     7201 gtttttaaca gcagtgcttg ctgactaccc tgcaataaaa aagataaatg ttataaatac
     7261 agctgctgtg ctgctagaag caatgcaaga gcatgattac aaggtagagt atgttcttga
     7321 ttgcatggag ttttatttgg cacagatgat aaaaagaaat ttgaataaca aaatgcttgt
     7381 tcaaaagata aaaaaagata tttcgaaaat ccagcatgcc aaaaaacagg cacaggctta
     7441 tatcaaaccc cagcttatca ttgaagacct gttgttttcg tttgcgtttt agattttaat
     7501 ttgtagtcta aaaagctttt aaatagcact ttttactcat gaaacattaa gaaatgtaac
     7561 agatatatac tatttataac tctaatatgg caattttctt taaaagaaat tgtttatata
     7621 agtacgagag atataagaga cgaaagacaa aggttaaaca ccacttacat attagagata
     7681 ttagagaaac aaagctaaac cacaaactta aaaacttact tatttacttc acttcattta
     7741 cttcacacac ttcacaatag acgaggaatg taaagaaatt ttcattccaa cggctctgct
     7801 taattgcgag ccgttttttt tattttttga ttaatattcg gggaattttt gataaagttt
     7861 tgaaagtata ggatggtctt tcaataactc tttccaatga tcgagctctt ttcccttgag
     7921 tgacatattt gtagaaaccg tattaaaact caacagcctg tgtgcatttg ttctttcaat
     7981 cctgtttttg cattgctcaa tcgttgttac tgctgctgtt gtgttcatat caataaaaaa
     8041 ctttccgcat ttttctataa caattggcac aaaactgctt atgggtattt ctccggcaag
     8101 gcgttcaaag tgtttttcca gtgctggcat gatttggttt gagtttttta tttgaacata
     8161 gtactcttct cccctgtcag gaagaaaacc catttttgta tggtacaaaa ttgcttttgg
     8221 aagagcaacg cggggtatct tttctatacc gagctgcact gctctttcta tatgcatctg
     8281 gtcgagccgg aagcccactc ccgcaagatc ctgtctgtga gtattcatct ctcctgtaat
     8341 cataaacaat tttttgtccg aagccggctt tatgctatat tctttgctgc cgatgctttt
     8401 gccgaatttg tctacaagct cgatggtctc aactgttacg gaaggttcgt aatggttctt
     8461 ttttgaagag agttttacct ttgcttcgac aggttttcct gtttttaaat ctttgagcaa
     8521 aatagtatca ggcctctggc ctttgtattc aaaggtatcg cttaaaagct ctttcattgt
     8581 gc
//
LOCUS       DABS01000069           10971 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_27913, whole genome shotgun sequence.
ACCESSION   DABS01000069 DABS01000000
VERSION     DABS01000069.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10971)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10971)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10971
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(174..791)
                     /locus_tag="CPT85_02590"
     CDS             complement(174..791)
                     /locus_tag="CPT85_02590"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25293.1"
                     /translation="MDFEMEYIEESLNFPVWKTRFLEGFCPIYEIFEADKTSDKSSTG
                     CVLLNLFNRMINIIKKRLKEEHNISTLFPTDTIIEGQKAGYIENKDLCFEIINYSINF
                     YSTKSFSIYPKDEYLKLLADFYEKFSSDVKYATANIIHKKSKNIDNLFGLKKEYYDDI
                     INVMKNNKNVKVARIFGSRISENYREFSDIDMILEGTYTEKGFRE"
     gene            856..1083
                     /locus_tag="CPT85_02595"
     CDS             856..1083
                     /locus_tag="CPT85_02595"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25294.1"
                     /translation="MNSSPAFRGNDKKEIKPGEPGYASGQGHYEYRPWTDCYPEDWDG
                     PRSGAGYDPVWVPDGSSSGSNYGNLYAGSGD"
     gene            complement(1096..2135)
                     /locus_tag="CPT85_02600"
                     /pseudo
     CDS             complement(1096..2135)
                     /locus_tag="CPT85_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013112552.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
     assembly_gap    1543..1544
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2155..2871)
                     /locus_tag="CPT85_02605"
     CDS             complement(2155..2871)
                     /locus_tag="CPT85_02605"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25295.1"
                     /translation="MKVPVVSTSHQEAINSMFSSFARNCIGKTKNNMQLKDEFLTLNR
                     NYTKSGLGDTFLYKSERLSGHLLKNGNLKLANIFINELGKIYLRIGNAELAEKTILKS
                     LRISELLNDELHVLARCNDLEYLYKALDNKEKLFKLLQMKKNCAKRIVRDYEKCAKNF
                     NSLMREPTSLESVKKQLAFTYNDMADILVSKRPKDSIKMVEKAKEIYKELGQQKEVNF
                     LTIKMQIIERNMKKRQYTKP"
     gene            2958..4232
                     /locus_tag="CPT85_02610"
     CDS             2958..4232
                     /locus_tag="CPT85_02610"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25296.1"
                     /translation="MFDKKYKEILQHNLKIKDPALLDCIVGEEEFRYLLSKYDKNSFV
                     PLKNFCANLHVHTIYSDGTANIKEIFDNAQMIAEKNNKQFLLAITDHDTIEGTKEALT
                     FLLENKEKYKNLKLVLGVEISTVGTKFSGQIKAFDIHTLVYCINPFDKRLNDFINKKR
                     QLKFELAKRILFDLQNGLENVLKTHNIELSLDEASKIHPMITKGEDEVSHPLKKYIFS
                     KILFSHYVENDDAILNILKNKGIDTKSMSYEMPVFKYKSMFNNEKYFYIYKEALEKYL
                     NQITGENIIKLPQIPQSIVETLLKGKYICEAAHPSVGKACTGQDAFSFLEDTLSFISS
                     LDYGLMSIAHPARLNLKNTTLEYPDFFDELFYTYKKYGRDKAYAYEKYYQSYSNKKIQ
                     GILDIIDNSADKFALAFTGGIDSHGKNICTRC"
     gene            complement(4318..5694)
                     /locus_tag="CPT85_02615"
     CDS             complement(4318..5694)
                     /locus_tag="CPT85_02615"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25297.1"
                     /translation="MKYKKLAAALITASLLTTNLAPLSCLAKDNKKSKNKLIKSQVTQ
                     YRFDYVNTDWWKNFDDDYLSEYIIKAIENNHDLKIATLKVEQYHQMTNLQFASELPVV
                     SGGFAPTGIKLPGATNTSGVWAFPLNVSYELDLFLKNRDKTRSAKKDWEKAKIDERAS
                     YIAISSAVGATYFNIIKADKLIELQKEIIKDRKQIFELMSDRNKAGLTSTADVVRANK
                     AYVAANADLTELEKTRNSLLNSLAVLTGENPANIDKLKRKNYNDSYLVKIPESIPSEI
                     IDQRPDYLAAEKMVEKAGIDVRVAKKEFLPKINLLGLMAFGSSAMGSAFNWANVFGFL
                     SASAMLDLFAGGRKVANLKLKKNTYEQILHNYYNTNLKAIQEVNDALVALKQDDKKYK
                     TNLKVYKLEQKDFDYSTVKYDEGMISYLDLLQKRENLLSLNKQVVSDKLNCNIDYIGL
                     YKATGAKL"
     gene            5885..6151
                     /locus_tag="CPT85_02620"
     CDS             5885..6151
                     /locus_tag="CPT85_02620"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25298.1"
                     /translation="MNFNSVSNTPYNSFYNDNPYRQYGYAQMPEIAYQPVYNQPYQYM
                     QEPPSQENPAKTLGLALFLQGISSGLERVSNWXXCKRICISCRC"
     gene            6093..6725
                     /locus_tag="CPT85_02625"
     CDS             6093..6725
                     /locus_tag="CPT85_02625"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25299.1"
                     /translation="MKEFPIGXXAKEFASHADVEKVANSMVTKNKLDVNVAYINESNK
                     HLYSKAYGLGNALDPVAKGENAFFVDKLKLAVAPESKPSLILHELGHAVNAKKGFTKL
                     LQNTRRFAPFAPMALLFANRLSPNKQNGEKTFIERNAGLLGFAAFLPTIIEEGIASLR
                     GIKAAKKVLNNPKNLNILKKNYAFALATYILSGVALGVASKQTILAEADK"
     assembly_gap    6114..6117
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6794..7255
                     /locus_tag="CPT85_02630"
     CDS             6794..7255
                     /locus_tag="CPT85_02630"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25300.1"
                     /translation="MNVSIITLVIFLLMQSVMICTAHAAASIGSDIKNIQKNGNMIGT
                     YNTKSNISVIEYDTFGSETGYYIDDAFGMTTKYDKLGNVVSKYKTNQQGKTYLYDKYN
                     HVVGYFKAVSKYKTMLYDKDGTPVGYFSTDGSGYVKKYDMDGNHLNTYKKR"
     gene            complement(7252..7578)
                     /locus_tag="CPT85_02635"
     CDS             complement(7252..7578)
                     /locus_tag="CPT85_02635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015205100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="DAB25301.1"
                     /translation="MILVRWICFALALIFTAWVIPGIEVSSFLSAMFACVIIALINTF
                     VKPVLQLVTLPINFLTVGLFSFVLNALLLMLAGWITPGLEVEGFLSALLGSIVLSLFS
                     IGISKI"
     gene            complement(7632..8510)
                     /locus_tag="CPT85_02640"
     CDS             complement(7632..8510)
                     /locus_tag="CPT85_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013120777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25305.1"
                     /translation="MPLADWLADALKDSLHMLPFLFFIFVVIEVIEYFYSNKMTKFAK
                     YSGKAGPLAGSLAASFPQCGFSVIASTLYTKKLITKGTLLAVYLSTSDEAIPVILSEP
                     SKLYLVVPLLLTKIIIAIIAGYAIDFIIDQTKNNNSLNDTVEDTEDEQGCCKHHINKP
                     RKRDLIFHPVEHTFNVFIFILIITIGINYLVFKIGGEENLGQYFLHDSVLQPVITAIV
                     GLIPNCAVSIAITLMYLKGALGFGSVIAGLCSSAGLGILVLFKKNDSLKDTLKIIFIL
                     LFVSIFSGILIQAIYN"
     gene            complement(8624..9496)
                     /gene="rfbA"
                     /locus_tag="CPT85_02645"
     CDS             complement(8624..9496)
                     /gene="rfbA"
                     /locus_tag="CPT85_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_357914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase"
                     /protein_id="DAB25302.1"
                     /translation="MKGIVLAGGAGTRLFPSTIVVSKQLLPIYDKPMIYHPVSVLMLA
                     GIKDILIISTPQDLPNFKKLLKDGSQFGVKFSYKEQPSPDGLAQAFILGEEFIEDDCA
                     ALILGDNIFYGPGFSGTLKNVVKRTKEQGGATVFGYQVKDPERFGVVSFDENGKAQTI
                     EEKPSDPKSNYAVTGLYFYDNKVVELAKNLKPSARGELEITDLNKIYLNQGNLSVELL
                     GRGFAWLDTGTHHSLLQASQYVQTIEENQGIKIACLEEVAYRMGFVTKEHLQKQAEQY
                     KNNEYFNYIKQIIS"
     gene            complement(9496..10332)
                     /gene="rfbD"
                     /locus_tag="CPT85_02650"
     CDS             complement(9496..10332)
                     /gene="rfbD"
                     /locus_tag="CPT85_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020755641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="DAB25303.1"
                     /translation="MSNYGRILVTGANGMLARDLCPMLEDADFEVIETTRNELDVTDE
                     LQVRRVISDVKPDYVIHCAAYTNVDKAEEEPETAELVNAKSAEYIAKACNSNNAIMIY
                     ISTDYVFDGTKKTPYVSDDTTNPTGAYGLSKLHGEEAVRKFCHAHYIIRTSWLYGHHG
                     KNFVETMISLAEKTELKVVDDQVGCPTWTVDLSDAIISFIDEEPPFGTYHACGAGSTS
                     WYGFAKEIFDLMSLNVNLIPCTTEEFPRPAKRPAYSVMDNEGLLRDWKQALQEYIELR
                     VD"
     gene            complement(10332..>10971)
                     /locus_tag="CPT85_02655"
     CDS             complement(10332..>10971)
                     /locus_tag="CPT85_02655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010690235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="DAB25304.1"
                     /translation="TQRFLQVSTDEVYGTLGKDGYFYETTPLAPNSPYSASKASADML
                     VRAYYETYKMPVLNTRCSNNYGPYQYPEKLIPFFISQLLKGEKVPVYGDGMNVRDWLY
                     VYDHCSAIDTVLHKGKVGEVYNIGGHNEKTNMEITKIILEAMGKDESSIRYVEDRLGH
                     DRRYAIDNHKIQSELGWEPSLTFEEGIKLTIDWYLNNQDWMKSIEAKKASLV"
BASE COUNT         3384 a         1976 c         1814 g         3791 t
ORIGIN      
        1 attgcgtatg ctttacatct ctctaaaaga aatataattg tcgacaaaat agtcagagcg
       61 tttgtaaaaa aatttgcttc taattgtatt acgatatata aatggtttta acctgtaatt
      121 tacatcgtag atatcaataa aatatggtat tttaagccgt tggagctgtt ttcttattct
      181 ctaaagccct tctctgtata agtgccctca agaatcatat cgatatctga aaattctctg
      241 taattttcag atattctcga accaaaaatt cttgcaactt ttacgttctt attatttttc
      301 attacgttaa tgatatcgtc ataatattct ttttttaatc cgaaaagatt atcaatattt
      361 ttactttttt tgtgtattat gttggcggtg gcatatttta catcactgct aaatttttca
      421 taaaagtctg ctagcaattt taaatattcg tctttgggat atatgctaaa acttttggta
      481 ctgtaaaaat tgatcgaata attaattatt tcaaaacata aatctttatt ttctatatag
      541 ccggcctttt ggccttcaat tattgtatct gttggaaaaa gtgtggagat attgtgttct
      601 tcttttagac gtttttttat aatattaatc atgcggttaa acaggtttag gagcacacat
      661 ccagttgaag acttatctga tgttttatct gcttcaaaaa tttcatatat tggacaaaat
      721 ccctctaaaa atcttgtttt ccaaacagga aaattcaatg attcttcaat atattccatt
      781 tcaaaatcca tataatgcct cgtatttctg ccttttttga agaaataagt atccagaaat
      841 cagtcaagag gtaagatgaa ttcctcacca gcatttagag ggaatgataa aaaggaaata
      901 aaacccggtg agcctggtta tgcaagcggc caaggtcact atgaatacag accttggaca
      961 gactgttatc cggaagattg ggatggacca agaagtggcg caggctatga ccctgtatgg
     1021 gtccctgatg ggtcgtcctc aggaagcaat tacggcaatt tatatgccgg aagcggtgac
     1081 taataagaaa ttttactatt cagaatatac tgctattttc aaaatattat cggctttgtt
     1141 ttcaaaaatt tcatagccgt gtaaaatatc atcaaatttt atctttttgg aaataagaaa
     1201 atcagtatta attctgcctt cggatatata ccggaggagc tctttgcaat aaatagcatc
     1261 gactcctccg gttttaaata taagattttt tccgtacatt tgtggcagag gcaatatttg
     1321 cggactttca tacattgcta caactgctac tattgcattt ggtctggcta ttttccaggc
     1381 catttcaaat gttgtttgag ctcctgctgc ttcaatcaca ctgtcagcgc ccctgttttc
     1441 tgtaatgctt tttactgcgt attcaatatc atcttttagc gggtttaagc aaatatctgc
     1501 tagctgctgc tgttgtgcaa tgtttaggcg attttcgtca atnnatcaat tgcaacaatt
     1561 tttgatgcac cttttaattt tgcacatatc atagaagtca aaccgacagg cccgcagcct
     1621 attacagcta ttgtatctcc atttcggatt tcacacattt gtgcaccaaa gtagccgcta
     1681 gagagaatat ctccaacaaa aagtgcattt tcatagctaa cattgtcagg tatcaaagtc
     1741 aggccgtttt cagcataagg gacacgcaca tactctgcct ggcatccgtc aattgtacaa
     1801 ccaagctccc agcctccgtt tatgcagtta tttatatatc ctcttttaca aaaataacat
     1861 tctccgcaaa atgtctcaca atttgcgctt actctgtcgc cgatttttag gttctttaca
     1921 gcggaaccta ttgctgcaat ttctcccaca aattcgtgtc ccaaaacaat attttctttt
     1981 gctcttggta cggctccgtg cataatatgc aagtcacttg tgcatataga agaaattgtt
     2041 acttttacta ttgcatcttt ttcgcctttt atgacaggga aaggcctttg ttctttttgt
     2101 ataatgccgt tacctttgta aaccagtgct ttcataaaat aagcatacca cattttaagg
     2161 ttttgtatat tggcgttttt tcatatttct ttctataatc tgcattttta ttgtaagaaa
     2221 attaacttct ttttgctgac ccaattcctt ataaatttct tttgcttttt caaccatttt
     2281 tatgctgtct ttaggtctct tgctgaccag tatatctgcc atgtcgttat atgtaaaagc
     2341 aagctgcttc ttaactgatt caaggcttgt gggctctctc atcaatgaat taaagttttt
     2401 agcgcatttt tcgtaatctc tgactattct ttttgcacag ttttttttca tttgcaaaag
     2461 tttgaataat ttctccttat tatcaagtgc tttatacaaa tattccaggt cattgcatct
     2521 tgccagtaca tgcaattcat cattcaacaa ctcgctgatt ctaagtgatt taagaatggt
     2581 tttttctgcg agctctgcat tgcctattct tagataaatt ttaccgagtt cgttaataaa
     2641 tatatttgca agtttaaggt tgccgttttt taaaagatgg cctgataatc tctctgattt
     2701 gtacaaaaaa gtatcaccaa ggccgctttt ggtgtaattt cggtttaaag ttaaaaattc
     2761 atctttaagt tgcatgttgt tttttgtttt gccgatacaa ttgcgggcaa atgaactaaa
     2821 catgctgttt attgcttctt gatgtgatgt actaactacc ggaaccttca tattataatt
     2881 aagtctgtaa ataataaaaa ttgcttattt attttgttct atttaagatt atttacaaaa
     2941 ctaaaggttt atacactatg tttgacaaaa aatataagga aattcttcaa cataatttga
     3001 aaataaaaga ccctgccttg cttgactgta tagtcggtga agaggagttc aggtatcttt
     3061 tgtcaaaata tgacaaaaac tcgtttgtgc ccttaaaaaa cttttgtgca aatttacatg
     3121 tccatacaat ttattctgac ggtacggcaa atatcaaaga aatttttgat aatgcacaaa
     3181 tgattgcaga gaaaaataac aaacaatttt tacttgcgat tactgatcac gatacaattg
     3241 agggtacaaa agaagcttta acttttttat tggaaaacaa ggaaaaatac aagaatttaa
     3301 aacttgtttt aggggttgaa atttctacgg taggaacaaa attctccggc caaataaaag
     3361 cttttgacat tcatacactt gtatattgta taaatccgtt tgataaaaga ctaaatgact
     3421 ttatcaataa aaaacggcaa ttaaaatttg agctggccaa aagaattctt tttgatttac
     3481 aaaacgggct agaaaatgta ttgaaaacac acaacataga gctttctctt gatgaagctt
     3541 caaaaattca cccaatgatt accaaaggtg aggacgaagt cagccacccg ttaaaaaaat
     3601 atattttttc aaaaattctc ttttctcact atgttgaaaa tgatgatgcg atattgaata
     3661 ttttaaaaaa caaaggtatt gatacaaaat ccatgagcta tgaaatgcct gttttcaagt
     3721 ataaaagtat gttcaacaat gaaaaatact tttatatata caaagaggct ctagaaaagt
     3781 acttgaatca aattacaggt gaaaatatta taaaacttcc gcaaatcccg caaagtattg
     3841 tagaaactct tttgaaaggc aaatatattt gtgaagcagc acacccgagt gttggtaagg
     3901 cttgtacagg gcaagacgca ttttcttttt tggaagatac actcagcttt atatcttcac
     3961 tggattatgg gctgatgagc attgctcatc ctgcgagatt gaatttaaaa aacacaacac
     4021 ttgagtaccc tgactttttt gatgaattat tctataccta taaaaaatat ggtagagata
     4081 aagcatacgc ttatgaaaag tattatcaat catactcgaa taaaaaaatt cagggtattt
     4141 tagatattat tgacaattca gcagataaat ttgctcttgc ttttacaggc ggcattgatt
     4201 cacacggcaa aaatatttgc acaagatgtt aataaaaaaa ataccgcatt gaacttaggg
     4261 aggttcagtt gtgcggtaca aagttcttat ataagaagtg tggttttata gtgtaaacta
     4321 gagcttggcg cctgttgctt tgtacaaacc tatgtaatca atgttacagt taagtttgtc
     4381 agagacaacc tgcttgttta agctcaggag attttctctt ttttgtaata aatcgagata
     4441 ggaaatcatt ccctcgtcat attttacagt gctgtaatca aaatcttttt gttcaagctt
     4501 atatactttt aagttagttt tgtatttttt gtcatcctgt ttaagcgcaa caagagcatc
     4561 attgacttcc tgtattgctt ttaggtttgt attgtaataa ttgtggagta tttgttcgta
     4621 agtgtttttc tttaacttaa gatttgcaac ttttcttcca cctgcaaaaa ggtcaagcat
     4681 tgcacttgca ctaagaaaac caaaaacatt agcccagtta aatgcactac ccattgctga
     4741 tgagccaaat gccattaacc cgagcagatt gattttaggc aaaaattcct ttttagcaac
     4801 tcttacatca attcctgctt tttctaccat tttttcagct gcaaggtagt caggacgttg
     4861 gtctataatt tcagacggta ttgattccgg tatttttaca agatatgagt cgttgtaatt
     4921 ttttcttttt aatttatcaa tgtttgcagg attttctcct gtcagaacag ccagactgtt
     4981 taaaagagaa tttcttgttt tttccagctc ggtaaggtct gcatttgctg caacataggc
     5041 tttgtttgct ctgacaacat ccgcagtcga tgtcaatcca gccttgtttc tatcagacat
     5101 tagttcaaaa atttgttttc tgtctttaat tatttctttt tgaagctcaa ttaatttatc
     5161 agcttttata atattgaaat aagtggctcc gactgctgag gatatcgcaa tatatgaagc
     5221 tctttcatct attttagctt tttcccagtc tttttttgca gagcgtgttt tgtctctgtt
     5281 ttttaaaaac aaatctaact cataagacac attgagagga aaagcccata ctccgcttgt
     5341 gtttgttgct cccggaagct tgattccggt aggagcaaaa ccgcctgata caacaggtaa
     5401 ttcactcgca aactgaaggt ttgtcatttg atggtactgt tcaactttta atgttgcaat
     5461 tttcaagtcg tggttatttt caatagcttt gataatatat tctgaaagat aatcatcatc
     5521 aaagtttttc caccaatcgg tatttacata atcaaagcga tattgtgtaa cttgtgattt
     5581 tatcaatttg ttttttgatt ttttattatc ttttgccaga caagacagtg gtgcaagatt
     5641 tgttgttaga aggctagctg ttattaatgc tgctgccagc tttttatact tcatatacta
     5701 ttctcccgaa tatattttat tttggattgt tatcataata acataatgtt atcataataa
     5761 caatcaattt tacaatcctt aatattattg attgtgtttc tgtttattaa aattttagtc
     5821 tattttttgt aaatttagca aatttttcgt acgacatgtt ttattataaa tgaaggtaga
     5881 agttatgaat tttaatagtg taagtaatac gccgtataat agtttctata atgataatcc
     5941 gtacagacaa tacggttatg cacaaatgcc tgaaattgca tatcagcctg tttataacca
     6001 gccttatcaa tatatgcaag aacccccgtc tcaagaaaac cctgctaaaa ctttaggtct
     6061 tgctctattt ttacaaggga tttcatcagg gcttgaaaga gtttccaatt ggtnnnnctg
     6121 caaaagaatt tgcatctcat gcagatgttg aaaaagttgc aaattcaatg gtcacgaaaa
     6181 acaaactcga cgtaaatgtt gcatatatta atgaaagcaa taaacatcta tactctaagg
     6241 catacggtct tggtaatgct cttgatcctg ttgctaaagg agaaaatgcc ttttttgtag
     6301 ataaactcaa actggcagta gctcctgagt ccaaaccttc tcttatcctc cacgaacttg
     6361 ggcatgctgt gaatgctaaa aaaggattta ctaagttatt acaaaataca agacgatttg
     6421 ctccttttgc accaatggcg ctgctttttg caaacagact ttcacctaac aaacaaaatg
     6481 gtgaaaaaac atttattgaa cgtaatgcag gattgttagg ttttgcagcg tttttaccca
     6541 caataataga agaaggtatt gcgtctttaa gaggaattaa agctgctaaa aaagttttga
     6601 ataatccaaa aaatcttaat atattgaaaa agaattatgc atttgctctt gctacataca
     6661 ttttatccgg tgttgctctt ggtgtagcat caaaacaaac aatcttggca gaagcagaca
     6721 agtaactttt tatttctttt tttgaattcg acgggaaaat aagatataat ataaatatta
     6781 ttgggagagg tttatgaacg tatctattat tactcttgtt atttttctgc taatgcaatc
     6841 cgtaatgatt tgtacagcac atgctgctgc atcaataggg tcagatataa aaaatatcca
     6901 aaaaaacgga aatatgattg gtacatacaa tacaaaatct aatatttccg ttatagaata
     6961 cgacacattc ggctctgaaa caggttatta cattgacgat gcattcggta tgacaaccaa
     7021 atatgacaag cttggcaatg tagtgtcaaa gtataaaaca aatcaacagg gcaaaacata
     7081 cctttatgac aaatataatc acgttgtcgg gtattttaaa gctgtttcaa aatacaaaac
     7141 aatgctatac gataaagacg gcacacccgt gggatatttt tctactgatg ggagcggtta
     7201 tgttaaaaaa tacgatatgg acggcaatca tctaaatacg tataagaaac gttaaatttt
     7261 actaataccg atactaaaga gtgataatac aattgaaccc agcagtgcac ttaaaaagcc
     7321 ttctacttca agtccgggtg taatccatcc tgcaagcatc agcaaaagag cgtttaatac
     7381 aaagctgaat aatccgactg tcaaaaaatt tattggcaag gttaccagct gaagaaccgg
     7441 ttttacaaag gtattaataa gtgcaataat cacgcatgca aacattgcac tcaaaaaact
     7501 gctaacttca atacctggaa ttacccatgc agtaaaaatc agtgcaagtg caaagcaaat
     7561 ccatctaact aaaatcataa ttaaactcct tttacctttt tatatcactg taaaaagagc
     7621 cggtatatag gttaattgta tatggcctgt attaatatgc cggaaaatat acttacaaat
     7681 aacagtataa atatgatttt aagagtatct ttaagtgaat cattcttttt gaataataca
     7741 agaatcccaa gccctgcact tgagcacagc cctgctatta cagaaccaaa accaagtgcg
     7801 cctttaagat acataagtgt tatagcaata gaaacagcgc agtttggtat gagccccact
     7861 attgcggtaa ttactggctg caatactgaa tcatgaagga aatattgacc aaggttctct
     7921 tctcctccta ttttaaacac aagatagttt ataccgattg ttataatcaa aatgaaaata
     7981 aatacattaa aggtgtgttc aactgggtga aatatcaaat ctctttttct tggtttatta
     8041 atatgatgct tgcagcagcc ctgttcatcc tctgtatctt caacggtatc atttaagcta
     8101 ttattatttt ttgtttggtc tattatgaaa tcaattgcat aaccagcaat aattgcaatt
     8161 attatttttg ttaaaagcaa tggtacaaca aggtagagct ttgacggttc agacagtata
     8221 acaggtattg cttcatccga tgtagaaaga taaacagcaa gcaaagtacc ttttgtaata
     8281 agtttttttg tatataaagt acttgcaatc accgaaaaac cgcactgcgg aaatgatgca
     8341 gcaaggctgc ctgctagagg gcctgcttta ccggaatatt tagcaaattt tgtcattttg
     8401 tttgaataaa aatattctat tacttctatt acaacaaata tgaaaaacaa aaacggaagc
     8461 atgtgcaagc tgtcttttag tgcatcagcc agccaatctg ccagaggcat tttttctatt
     8521 aatgtatcaa ccggcaaaaa tattagctca ttaagtttgt tcagtgccgc aatcaagctg
     8581 ataaataaag tttgcaaact gttcatattt ggaaatatcc tttttaagag attatttgtt
     8641 tgatgtaatt gaagtattca ttatttttgt attgctctgc ttgcttttgc agatgttctt
     8701 ttgtcacaaa acccattctg taagcgactt cttcaagaca ggcaattttt atgccttgat
     8761 tttcctcaat tgtctgaaca tactggctgg cttgcaaaag tgagtgatga gtacctgtat
     8821 caagccatgc aaaacctctg ccaagaagct caacgctgag atttccctgg tttagataaa
     8881 tcttattcaa gtctgtaatt tccagttccc ctctggcaga cggtttaaga tttttggcaa
     8941 gttcaaccac cttgttatcg taaaaatata aacctgttac agcataattt gattttggat
     9001 cagatggctt ttcttcaatg gtttgtgctt ttccgttttc atcaaatgaa acaaccccaa
     9061 atcgttcagg gtcttttacc tgatatccga atacagttgc accgccttgt tctttagtcc
     9121 tttttacaac attttttaat gtgccggaaa aacctgggcc ataaaatatg ttgtctccaa
     9181 gtatcaatgc agcacaatca tcttcaataa actcttctcc aagaataaaa gcctgcgcta
     9241 atccgtccgg agatggctgt tctttatagc tgaactttac tccaaattga gagccatctt
     9301 ttaacaactt tttaaagtta ggtaaatcct gaggcgttga aataataaga atgtctttta
     9361 taccagccag cattaacact gaaaccggat gataaatcat cggtttgtca taaattggca
     9421 gcaactgttt tgatacaact attgtgctag gaaaaagcct tgttcctgca cctcctgcga
     9481 gaactattcc tttcattaat caaccctcaa ttctatgtat tcttgtagtg cctgtttcca
     9541 atctcttaat agcccctcat tatccataac actgtatgca ggtcttttgg ccggacgggg
     9601 gaattcttct gttgtgcacg gaattaagtt aacatttaga ctcattaaat caaatatttc
     9661 tttagcaaaa ccgtaccagc ttgtactgcc ggctccacag gcatggtatg tgccaaatgg
     9721 aggctcttca tcaataaaac ttataattgc atctgacaaa tcaactgtcc acgtcgggca
     9781 gccaacctga tcgtcgacta cttttaactc tgtcttttct gccagtgaaa tcattgtttc
     9841 aacaaagttt ttaccgtgat gcccgtataa ccagctggtt ctgataatgt aatgtgcatg
     9901 gcaaaatttt cttacagcct cttcaccgtg taactttgat aaaccatagg cacctgttgg
     9961 atttgtagtg tcatctgaga catatggcgt tttttttgtt ccgtcaaaaa catagtctgt
    10021 tgaaatgtaa atcattatcg cattgttaga attacatgct ttggcaatat attctgcaga
    10081 ctttgcattg acaagctctg ctgtttcagg ttcttcttct gctttatcaa catttgtata
    10141 agctgcgcaa tggattacat aatcaggttt aacatcagat ataaccctgc gcacctgtaa
    10201 ttcatctgtt acatccaatt catttctggt agtttcaatt acttcaaaat cagcgtcttc
    10261 cagcatcggg cataaatctc ttgcaagcat gccatttgca cctgttacga gaattcttcc
    10321 gtaattactc attaaaccag actcgctttc tttgcttcga tggatttcat ccaatcttgg
    10381 ttgttgaggt accagtcaat agtgagtttt attccttctt caaaggttaa tgaaggttcc
    10441 cagcccagct ctgactgtat tttatgattg tctatagcat aacgtctgtc atgccctagt
    10501 ctgtcttcta catatctgat agagctttca tctttgccca tagcttcaag aataattttt
    10561 gtaatttcca tgttggtttt ttcgttgtga ccaccgatat tgtaaacttc accaacttta
    10621 cctttgtgca atactgtatc aattgcacta cagtgatcat atacgtataa ccagtctctt
    10681 acattcattc catcaccgta caccggcact ttttctcctt ttaacaattg agaaataaag
    10741 aacggtatga gcttttcagg atactggtaa ggaccgtagt tattagaaca tcttgtatta
    10801 agaacaggca ttttgtatgt ttcataatac gctcttacaa gcatatcagc gcttgctttt
    10861 gacgctgagt aaggtgaatt tggtgcaagc ggtgtagttt cgtaaaaata tccgtctttg
    10921 cccagtgtac cgtaaacttc gtcagttgat acctgtaaaa atctttgggt t
//
LOCUS       DABS01000070           15893 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_3528, whole genome shotgun sequence.
ACCESSION   DABS01000070 DABS01000000
VERSION     DABS01000070.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 15893)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 15893)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15893
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..505)
                     /locus_tag="CPT85_02660"
     CDS             complement(<1..505)
                     /locus_tag="CPT85_02660"
                     /inference="COORDINATES: protein motif:HMM:PF01966.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="DAB25163.1"
                     /translation="MVITAHPKDGIDLAKEYGLPPIVQSFIVQHHGDSIASYFYNQAK
                     IEEGADKVTEEQFRYTGPRPNMKETAILMIADSVESASRTLKDHSQEELDGMINKIIQ
                     SKLNDGQLSDSPLTLKDLKTIAAALSKNLRAAHHQRIKYHENIIQELEEKALKKKFVA
                     PDKITTDE"
     gene            complement(598..2133)
                     /locus_tag="CPT85_02665"
                     /pseudo
     CDS             complement(598..2133)
                     /locus_tag="CPT85_02665"
                     /inference="COORDINATES: protein
                     motif:HMM:PF07697.9,HMM:PF07698.9"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    612..624
                     /estimated_length=13
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2507..3259)
                     /locus_tag="CPT85_02670"
     CDS             complement(2507..3259)
                     /locus_tag="CPT85_02670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="DAB25164.1"
                     /translation="MSGHSKWSTIKHKKAKVDAQRGVAFQKYSREIIVAAKMGGGDPA
                     ANFRLRTAIEKAKAGGLPNDNIKRAIEKGCGSGASENYEELTYEGYGAGGVAVIVEAM
                     TDNRNRTAGDIRSYFTKFNGNLGETGCVGWMFKDAGVVTFAKDDVDYEQLFNEAINAG
                     ADDFVDEDDEYKVITAPENFQIVVESLEKLGFKHSGAELTKLPQNTLEITDEKTAKMI
                     LLLMDKLEEHDDVQNVYSNFDIPDEVMEKVQI"
     gene            complement(3281..4917)
                     /gene="ilvD"
                     /locus_tag="CPT85_02675"
                     /pseudo
     CDS             complement(3281..4917)
                     /gene="ilvD"
                     /locus_tag="CPT85_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012646598.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
     assembly_gap    4709..4713
                     /estimated_length=5
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5016..5891
                     /locus_tag="CPT85_02680"
     CDS             5016..5891
                     /locus_tag="CPT85_02680"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25165.1"
                     /translation="MSLCIKKAFNITRDNIVVAQPIVIFMIVISLTTGALYQQTNKIA
                     YMVFFVANILLCTAFFSGWFNMIQKTLEHNKKAEKNFYRDDREKAEASFALGKEFFPG
                     VGEYFLPVTFTLVAYVVVYMLLLVAAYKFGMKYLPHPHINWGEFMAAANSTPAQMQKY
                     VASLSFYQLKAMNIWMFFFGAVFCVFSLLTMFLFPALYNNLSKHDDKKNPYLKSLVLA
                     PFSAFNTNIVFVFRHFLGSVGVLIFLLFLNIIMSVLSLVFSLNIVLTVFGLLLSFYVM
                     TYALVLIFLYYDENK"
     gene            5875..6813
                     /locus_tag="CPT85_02685"
     CDS             5875..6813
                     /locus_tag="CPT85_02685"
                     /inference="COORDINATES: protein motif:HMM:PRK00091.1-3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="DAB25166.1"
                     /translation="MTKTNKKDIIAIAGPTASGKTALAVEIAKIFDTEIISADSRQIY
                     KEFDIATAKPSKEEMKGIKHHLMDVVEPVEEFTVADFADEASKVIQSLFEHDKIPVVA
                     GGTGLYFRILLENYDMPRVAPDKELREHLHKIEKEKGAQALYQMLCEADPVLAKNMHP
                     NNTVKIIRALEVCKTLGTPMSQAQKKKEPQYNVIWLGLGHLNGEDRQFLYNRTDRRVD
                     VMLEQGLEQEAKNLFEKYGKIRSLEKTIGYQEFIDYFENSITFDECVEKIKQNTRRYA
                     KRQLTWFRQNKEIYWLDIKDKEQTIKEAVQRIKDLL"
     gene            6846..7970
                     /locus_tag="CPT85_02690"
                     /pseudo
     CDS             6846..7970
                     /locus_tag="CPT85_02690"
                     /inference="COORDINATES: protein motif:HMM:PF13231.4"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    7948..7958
                     /estimated_length=11
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8054..8500
                     /locus_tag="CPT85_02695"
     CDS             8054..8500
                     /locus_tag="CPT85_02695"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25167.1"
                     /translation="MQIPGVIVIMASVLFNSFAIFKDKKKLHFIALVGFMAVLSMFAA
                     KMIFPYVVSFGQNELIEYAKTAKNKGAKLAAMGTGNRYSLIYYAESQIDFIKDFKIDN
                     NALDKGTYVIVRNKNVKDFNNLYNYEIIKQGKKYSLYNNAIPKTKK"
     gene            8528..9910
                     /locus_tag="CPT85_02700"
     CDS             8528..9910
                     /locus_tag="CPT85_02700"
                     /inference="COORDINATES: protein motif:HMM:PF02861.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25168.1"
                     /translation="MFERFTEKAINIISMAQKEAADSKTFKIYPEHILLGVLETKSNI
                     CSRLLAYGGMNADDFREYVYKKYSDVSHEFMHTNIAFSEASQKLIKLASELAKKKNSY
                     IMSEHILLALILTAESAKSELLQDFNRYGVDIEKLKQTLLKLIEKNNKKNEIHPELER
                     KKDKSEYSTVQSIFKEGDAKDILERAVAKLTASHYEILGTEQIVQSILEDTNSDLTKL
                     LNESGIDLEKYTGKLQEVSSRQAEFEEKQIIFTPNAFKTMLLAFETAKELGSASVKPE
                     HIILGVLKAKSGIAYNIFKELHIQDDDLAHKIIKPIEKQMPETLTILRLAKREAQSMN
                     RNIVGSEFILLGIIGEGAGIGAKVLSQLGITIKDARIEVEKVLGYGNSYTFGEVVFSD
                     RAKKILEIAWEKAQKHKNTKIASENLLWAITQTPDSVAMQVLSNLGVDVLEVNQGILK
                     ELEELKSSEA"
     gene            complement(9907..10155)
                     /locus_tag="CPT85_02705"
     CDS             complement(9907..10155)
                     /locus_tag="CPT85_02705"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25169.1"
                     /translation="MIQNLLGLISKTLTPTRSTAISAVRPASVNPFAAGQSSNPFMAN
                     SSISSNFYGKNNPVRGGYFAGYYNGKPNIVGRKLFLEV"
     assembly_gap    10301..10308
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            10360..10566
                     /locus_tag="CPT85_02710"
     CDS             10360..10566
                     /locus_tag="CPT85_02710"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25170.1"
                     /translation="MIKKCPFNFDECTPQCALFIAPDDLNELVANRLTSVGVYDKHHG
                     MCSFKNQALAKSREIFEKSQVNKF"
     assembly_gap    10567..10574
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            10627..11613
                     /locus_tag="CPT85_02715"
     CDS             10627..11613
                     /locus_tag="CPT85_02715"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25171.1"
                     /translation="MSELSLGQFIKNVFDYSTGKPVQQQPGKVANENFQRAQNEAMKM
                     VQQTAQNITQNFVRQQDILNTQMMLKELSNVERSWLMKNMFNFPENLSQLIEQIVTQG
                     KTVTAQELAALMKQDIDISKILVLLQTNGKAALEKLQKMITTMNQSGIYDTRQLKEMS
                     VLINACIPANDASQAQILKSLMVMYLPWLPLNESAGFNFGADSAEEGKKGAGEESITI
                     IITTKNYGEIKVFLFMAQNGVNMDVTCSDDFPKERFNEAIKGENAIHLSENPVYTTRK
                     SSSDEDAKELKVEFSKSAKITPQLLIIVHAIIKIVTELDSTGTLQEKRKEEL"
     gene            complement(11754..12818)
                     /gene="aroF"
                     /locus_tag="CPT85_02720"
     CDS             complement(11754..12818)
                     /gene="aroF"
                     /locus_tag="CPT85_02720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016252229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="DAB25172.1"
                     /translation="MIIIMEPKATVEQINAVKRYMENKGFKIVLNHGDVMTVLAAIGD
                     KRLIEPQSVASFDGVREVKLIQEPYKLASRESKEEDTVVEFKNGVKIGGLERPVMMVG
                     PCSVEKDFSWLMEVATAAKEMGCEFLRGGAFKPRTSPYDFDGLGEKGLQYLKEAAEKT
                     NMLVVSEVMDTADVDMFCDYVDLIQIGARNMQNFKLLKAVGTAGKPVLLKRGPAATIR
                     EFLLAAEHIMANDNGNVILCERGVKGFDSTFTRNTLDIAAIPIIKKFSHLPVIADPSH
                     GTGRRYLIEPMSKAALMAGAHGLMIEIHNDPDNASSDGAQSLSLPMFKEVQRHLNKLI
                     GRIDYDNKLEKAEREKAALK"
     gene            complement(12848..13873)
                     /locus_tag="CPT85_02725"
     CDS             complement(12848..13873)
                     /locus_tag="CPT85_02725"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00132.22,HMM:PF00483.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25173.1"
                     /translation="MITKAMVMAAGVGSRLEPLTQNVPKPLVPVLNKPVMDILLQKLK
                     SYGIEKVIANTHYLAQQIEDRYSKNSPVDIDFSFIRETDLSGTAGGVKKCESFFEGEE
                     DFLVVSADGLHDADLEKVMRSHKESGCIATMAISAVEHNEVSKYGVVVSSPEHRVIEF
                     QEKPPVNEAKSNFINTGIYVFNKRIFDFIPKGEKYDFAKNVFPALLKAGEKINTYRIY
                     SYWSDIGSIEQYIESNIDALHRKVMIPQPNIIKKYDAVYVCRKNTVLGESVKISNNAV
                     IGSNCKIGKNVSLDNVILWDNTIVADNVTLKNVVAAENTVIKSSITGNEKWEIIAPDK
                     IIDLSLV"
     gene            14037..14867
                     /locus_tag="CPT85_02730"
     CDS             14037..14867
                     /locus_tag="CPT85_02730"
                     /inference="COORDINATES: protein motif:HMM:PF01966.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25174.1"
                     /translation="MLDLTQTYEVVIFSIGDTKAGTKMGKLQLKNLADDSVLNCILWE
                     EALNRIDGKVFRTGNQVKILGGSYNEKYNNCLITSVELVKEAKLGLDKDERDKLFNAI
                     VEYANEIEDEELKKYVTELLFEHEEQFKIAPAARLMHHNYLGGLVEHTFECLEIAKCL
                     ISNLYKKVDKSCVFAACILHDFGKIFEYKIDTESGLIEYDEKFPKEXLTHSQWGFSNC
                     MAHGFKTVAKMIAAHHGRAEWGAIVDLNEKDLDPLLYLVHHIDDLSAKFGRTAISDLG
                     "
     assembly_gap    14656..14657
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(14963..15484)
                     /locus_tag="CPT85_02735"
     CDS             complement(14963..15484)
                     /locus_tag="CPT85_02735"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25175.1"
                     /translation="MSLGVTLNTNRNYIDTSAINEVAKQIFTKADAKSTSIDTNVVDL
                     SKFRRPEVGIDLYSQRTNVDTAKFVAVRNAGLDINLNQNFIANVQYLNTMAAMGTNKV
                     QKNVEGKLIAPVAEGEKSEIRNVFNLPGTIELTNSKNLDKDKRGSNPFSFNSMNTNKG
                     KEKQEEKVINIFA"
     gene            15686..>15893
                     /locus_tag="CPT85_02740"
     CDS             15686..>15893
                     /locus_tag="CPT85_02740"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25176.1"
                     /translation="MLFPGQTTSXXLTKVKSGQIESVQIDKDTLIAKPKAGQAESVTT
                     VMNSKKPVPVQYRVMIPMNDLSLYQ"
     assembly_gap    15714..15718
                     /estimated_length=5
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         4514 a         2946 c         3189 g         5192 t
ORIGIN      
        1 cttcatctgt tgtaattttg tcgggtgcca cgaatttctt tttgagggct ttttcttcca
       61 gctcttgaat aatgttttcg tggtatttga ttctctggtg gtgagcagct ctcaggtttt
      121 tgctcaacgc agcagcaatg gttttgaggt cttttaatgt cagggggctg tcagaaagct
      181 ggccgtcatt gagttttgat tggatgattt tgttaatcat tccgtcgagc tcttcttgtg
      241 aatggtcttt gagcgttctt gatgcggatt caaccgagtc tgcaatcata aggattgcag
      301 tttctttcat gtttgggcgc gggcctgtgt agcgaaactg ttcttctgtt actttatctg
      361 cgccttcttc tatttttgcc tgattgtaga aataacttgc tatagagtca ccatggtgtt
      421 gaacaataaa gctttgtaca atcggcggca gtccgtattc ttttgcaagg tctataccgt
      481 ctttggggtg ggctgttatt accattttac tcaatctcgg attgagtttt gtgtgggggt
      541 tttcaatgcc aaagtaagtc tggttttcta caaagaataa aggtctttta agtttgccta
      601 tgtcgtggta annnnnnnnn nnnntccgat tgcttcggct gctgtttcac acaggttggc
      661 caccataagg cagtgtgcaa atgtaccggg tgcttcgaat tgaagacgtt ttaaaagcgg
      721 ctggttgtta tctgcaagct ctgcaagtcc gtaaggtgta acgattttga acatgctttc
      781 aagcaaagga ataattccga gtacaataat acctgacaat aggccgttaa gtgtaccgat
      841 tattgtgttt gtccaaacaa tcacagaatc aattggattg attgagtttt cgattaagta
      901 tatgattaaa atcaaaaaca gcattgcaaa tccgatttct ccgccgattt ttacaaggtc
      961 aaaccttctt gaatagcgaa ctttagatgt tgcgattgct gccacaagac agactattat
     1021 aaataccgca gcgggctgca tgggcatttg ttccacaagg gcaatgattg taattaatat
     1081 agttgttaca tttatcgcta ctctcgggtt tgtgaatact gatatcaaaa ccgcaagcgc
     1141 agggaacggc aaaaagtaaa aagatgcacc cgatggcaat actgttgcca gagcagacat
     1201 caaaacagac aaaagagcta taactgaaag gtagtttttt gttacaaact gtttttcgta
     1261 atacaaaagg taatacataa aagtaattac gcccatacac acgagtgcaa atatccctat
     1321 aacgcctttt gtgtttagct caagcacgtt gtaaccggct ttttgcagtg cgtctttttt
     1381 tacacgggta accggctcgc cggcaaatac aattttttcg cctttttcaa actttactac
     1441 tgttggagcg acagagttga ttgcgttttt cttggcaagc tctgttgcag cctcgtcaaa
     1501 taccatgtta ggtacaataa cctgttctaa aagcgctgat ataacacgta tttcaccttt
     1561 tgatgtttca aaatgcgtgt ttctcaaaat cattgatgaa aggttgccct tttcaaagtc
     1621 tttttccgta accccttgat tcaacacgtt tgtgagtgtt ttttctgctt ttgtgagcgt
     1681 attttttaat ctctcatcat ttgaatttat caaatagttt agaatatagt ctttgtaata
     1741 gttgttgtca aaatcaaaaa gaagcgccat ttcgtctttt ttctggctgt agaagctgtc
     1801 ttttgccctg atttgttcaa tggacttaac cagcattgca tagttgtttt ttatgtaggt
     1861 atcttctgcc ggagtcagaa taggctctac tttttgagca atttcttttt tattttgctc
     1921 ggttttaaaa gtatcaacaa ccttaatggt tttgggcgca acaatgtcgc gtttgcttgt
     1981 tccgtcagga gatatgatgc tctggaagag ataatatctt gcgccgagtg ttgctgtcat
     2041 gattaccgta aacaggataa aaatcagcag gttgattacc ttggaagacg aaaatgtgtc
     2101 tgcaagcagg ttaataaatt gaatttttct catataaata tctcatttaa tcgctatttg
     2161 aattatagat attttaatac gtacattaag aattgcaatc ctgcacgcgg aggacagacg
     2221 ggtataaaac cttaacaaac aggcatgacc gttaatcctt taaacagttg atgtaaaacg
     2281 ttttaaaaac gctaaaatca acatgtagac tattaatatt caatcttaca aaaagaaaag
     2341 aacggtgttt attatgaaaa caaattcagc agaatatact gaaagaaaat ttactatagc
     2401 agatgttttt gcaaaccagc accctgtcat taacggttgg ataatgctga gtgctgttgc
     2461 aattgttgtt ctttatgcaa ttacatttgc tactgtttag tattgattat atttgaactt
     2521 tttccatgac ctcgtcagga atgtcaaagt ttgaataaac gttttgcaca tcatcgtgtt
     2581 cttccagctt gtccattaaa agcaatatca tttttgctgt tttttcgtct gttatttcaa
     2641 gcgtgttttg aggcagtttt gtaagctctg cgcctgagtg cttgaaaccg agtttttcta
     2701 atgattccac aacaatctgg aagttttcag gtgctgtgat tactttgtat tcgtcatctt
     2761 catctacaaa atcatctgca ccggcgttta ttgcttcgtt aaacaattgt tcgtagtcaa
     2821 catcgtcttt tgcaaaagta accacgcctg cgtctttaaa catccagcca acgcagcctg
     2881 tttcgccgag gtttccgttg aattttgtaa agtagcttct gatatctcct gctgtgcggt
     2941 ttctgttgtc tgtcattgct tctacaataa cggcaacacc gcctgcgccg tagccttcgt
     3001 aggtcagttc ttcgtagttt tcgcttgcgc cagagccgca gcctttttct attgcacgtt
     3061 tgatgttgtc atttggcagt ccgcctgctt tggctttttc aatagcggtt cttaaacgga
     3121 agtttgcggc agggtcgcct cctcccattt ttgctgctac gatgatttct cttgagtatt
     3181 tttggaaagc aacgcctctt tgtgcgtcta ctttagcttt tttgtgttta attgttgacc
     3241 attttgagtg tcctgacata aatttatcct ttattaatta ttataatgtt actgcaccga
     3301 cagaggcgct ttgtactgtt ttagagtatt ttgcaaggaa tcctttaact tcttttggcg
     3361 gcagaggctt gaattctctg cgtctttgtt caagctcctc ttcgcttaca agaaggtcga
     3421 gttttctttg cggtatatct attttaattt tatctccgtt tttaatcaag cctataattc
     3481 cgcccatagc agcttccgga cagatgtggc cgatgcacag cccgcgtgtt ccgccggaaa
     3541 aacgtccgtc tgtaatcagt gcaacttttg caccaaggcc ttttccgaca atcatggaag
     3601 taggggcaag catttctctc atacccgggc cgcctttggg gccttcatag cagattacca
     3661 caacatcgcc ttcttttatc tggtctttgt ctatggcttc cattgtttct tcttctgaat
     3721 taaagacttt ggccgtgccc tcaaaagtca gtgctgaggg gtcaacccct gaaattttaa
     3781 taacggcacc gtcttgagca agattacctt ttaaaattcc tagcccgggg tttgatgtaa
     3841 tcgggttgtc gagcgtgtgc acgattgtgt tatcaaccca cgcagcctgt gctatttgtg
     3901 aaatttttaa acctgatacg ccttttgtat ctttgagttc gggtgtgttt ccgtaaagcg
     3961 ttttcattac cccggggatt cctcctgcgt tgtgcaaatc agtcattgta ggaagggcag
     4021 aggggtcgag tttgattatc tgagggattt tatagctcaa ctcatcaaag tctttgagtg
     4081 aaatatctat gtttcctgaa tttgcaatgg caagcaggtg caaaatagag tttgtggagc
     4141 cgcccagtgc aaggtctgtg acgattgcgt ttctcataga gtcttttgtt attatttcag
     4201 agggtttgat gcctttttca acgagctcaa cgatttttat tcctgattca aacgcaattt
     4261 gttttttctt tgaagatact gcagaagccg ttgcgcagaa aggaaggctc attcccatta
     4321 cttctgtcag gcaggccatt gtgttggccg tgtaaagccc ctggcaggag cctgctgacg
     4381 ggcagcattc ttcttccatt tcatgcaggc gctgttgggt gatttttccg gctgatagtt
     4441 tgccaacagc ttcaaaagag cctcttatca ttgttaaaac ttcatttttg gaacatccgt
     4501 ccatcatggg gcctgctgtt acaactatac aggggatatc gagtctgagc gcggctatta
     4561 acataccggg tgttattttg tcgcagtttg tcaaaagtac aagaccgtca agctggtgcg
     4621 cttcggctac cgtttctacg cagtctgcta tcaagtcacg agacggcagt gaatatttca
     4681 ttccgcaatg ccccattgca ataccgtcnn nnntgcctgt cctccgcctg tgtggattcc
     4741 tttttcaatt tgtctttcaa ggtcgcgcat tccggcatga cccggtacaa ggtcggaaaa
     4801 tgagctggct ataccgataa aaggcctttt taacccttct tttgaaactc cggttgcgta
     4861 aagcaatgaa cggtgtgctg ctttgtgtat gccttttttt acgttgtcgc ttctcatatt
     4921 ctgtattatc ccttctgtta ccccgtttac ttaggactga tattataata aaaattatac
     4981 tacaatattt aatataatat gttataatca gggctatgag tttatgtata aaaaaagcat
     5041 ttaatatcac aagggataac attgttgttg cacagccgat tgtgattttt atgattgtaa
     5101 taagccttac tacaggcgct ttgtaccagc agacaaacaa aattgcttat atggtatttt
     5161 ttgtggcaaa catactgcta tgcacagcgt ttttttccgg ctggttcaat atgatacaaa
     5221 aaactctgga acacaataaa aaagctgaaa agaactttta tagagacgat agagaaaagg
     5281 cagaggcgtc ttttgctctg ggtaaagagt ttttcccggg ggttggagaa tattttcttc
     5341 ccgttacttt tacgcttgtt gcttatgttg tggtttatat gctcttgctt gttgcggctt
     5401 acaaattcgg aatgaaatat ttaccgcatc ctcatatcaa ctggggtgag tttatggctg
     5461 cagcaaattc tacacctgct caaatgcaaa agtatgttgc atcattgagc ttttatcaac
     5521 taaaagcaat gaatatctgg atgtttttct ttggtgcggt attttgtgtg ttctcacttt
     5581 taactatgtt tttgtttcct gctctttaca ataatctttc aaaacatgat gacaaaaaaa
     5641 atccgtattt aaaatcgctt gtgctggctc ctttcagtgc ttttaataca aatattgttt
     5701 ttgtgtttag gcattttctt gggtctgtcg gggttttaat ttttcttttg tttttaaata
     5761 taatcatgtc tgtattgagc cttgttttca gcttaaatat tgtgttgact gttttcgggc
     5821 ttcttttatc gttttatgtg atgacatacg ctcttgtgct gatattcttg tattatgacg
     5881 aaaacaaata aaaaagatat aatagcaatt gcagggccta ccgcttccgg aaaaacagcg
     5941 ctggctgttg agatagcaaa gatttttgat acggaaatta tttctgctga ttcaaggcag
     6001 atatataaag agtttgatat tgcaacggct aaaccctcta aagaagagat gaagggaata
     6061 aaacatcatc ttatggatgt tgttgaacct gttgaagagt ttactgtggc tgattttgcg
     6121 gacgaagcct caaaggtgat acaaagcctt tttgaacatg ataaaatccc tgtggttgcc
     6181 ggaggaacag ggctttattt tcgtattttg ctcgagaatt atgacatgcc aagagttgct
     6241 cccgataaag aattgcgaga acatcttcat aaaatagaaa aagaaaaagg tgcacaggcc
     6301 ctttatcaga tgctttgcga ggcagaccct gttctggcaa aaaatatgca cccgaacaat
     6361 accgtaaaaa ttatccgtgc gcttgaggtt tgtaaaacac tgggcactcc gatgtcacag
     6421 gcgcaaaaaa agaaagagcc tcaatacaat gtaatctggc tcggtcttgg gcatttaaac
     6481 ggagaagaca gacagttttt gtataataga acagacagac gtgttgatgt tatgctcgag
     6541 caagggctgg agcaagaggc taaaaatctg tttgaaaaat acggaaaaat ccgcagcctt
     6601 gaaaaaacaa taggctatca agagtttatt gattactttg aaaatagtat aacatttgat
     6661 gaatgcgttg aaaaaataaa acaaaataca agacgctacg caaaaaggca gcttacgtgg
     6721 ttcagacaga ataaagaaat ttactggctg gatataaaag ataaagaaca aacgattaaa
     6781 gaagctgttc aaagaataaa agatttgtta taaaataatc tgataataaa cgactaaggg
     6841 gaaaaatgaa taaagcatct atattgaaat tttttaaaag gcacaaagac cttattgcca
     6901 tctttgtgat actgtttgtg tgctattttt tatacttttt ttcaatgggt tcgtaccctc
     6961 ttattgacgt ggacgagaca cgctatgtgg ccatgtcaag agacttgttc catgcaaatg
     7021 acttgttgac gctttattta aacggtgatt atttctttga aaaacctcct ctttattttt
     7081 ggcttgaggt tttgtctttc agtatattcg gtaaaataac agaagctaca gcaagaatac
     7141 ccgtgtctct ctgtgcggtt ttcggggtgg gtataacgta ttttctggga agtaaaatct
     7201 catcaaaaaa atatggactc atttgtgcct taatccttgc atcttgcttt gaatatgttg
     7261 tgctggcacg tgtggcaata ctggatatgc ttttgtcagt ttgcattgca gccagtgctt
     7321 tttcagggat ttatactctg ttttgctcac ataggtttaa aaaatacttt tggtggcttg
     7381 cttatatctg ggccggtttt gcggttatgg caaaaggcgt tccggggctg gcaataccgg
     7441 ctttgacaat tttcatttct tatattattg ccggtcgttt caaagaaatg ttcaaacctt
     7501 tatacataat ccccgggctt gtgcttttct ttatagtgac gttgccatgg catattatta
     7561 tgctgcaaaa atacggttat gtgtttttta gagaatacat ttacaaacat cattttgaac
     7621 gttttgcaaa ctcgcatgag cttggtagaa aacaaccttt ttattattac attcctgtgt
     7681 ttttcctcgg gtttatgccg tggatattct ccttcggggc tcaaattacg gtctttttca
     7741 aaaaacattt caaaaatatt cagggttatt ttgacaaatt ttgcgacctt cagcccttgc
     7801 ataagtttat ggttttaaat acagtgtttt tccttgttgt attcggtttt tattcagcag
     7861 caagcacaaa actgcccact tatattctgc cggcaatgtt tcctgcggca atgattcttg
     7921 gcaaattctg gtttgattat atttttannn nnnnnnnncc attattttaa attttgcatt
     7981 tatcttaacg gcaataggac tgactgtcgt accgcagttt attagagagg ctgacagagc
     8041 agggcttgag gcaatgcaga ttcccggggt aattgttatt atggcttctg ttttattcaa
     8101 cagttttgct atttttaaag ataaaaagaa gctgcatttt attgcacttg tcggctttat
     8161 ggctgtgttg tcaatgtttg cggcaaagat gatttttcct tacgttgtca gcttcggcca
     8221 aaatgagctt attgaatacg caaaaactgc aaaaaataag ggtgcaaaac ttgctgcaat
     8281 gggtacgggc aacagataca gccttattta ttatgcagag tcacagatag attttataaa
     8341 agattttaaa attgataata atgcgctcga taaaggtact tatgtaatag tacgcaataa
     8401 aaatgtaaaa gactttaata acctttataa ttatgaaata ataaaacagg gtaaaaaata
     8461 ctctttgtac aataatgcaa tacctaaaac caaaaaataa taaagcatac cctaaaagga
     8521 gaaatttgtg ttcgaacgtt ttacagaaaa agcaataaat ataatctcaa tggctcaaaa
     8581 agaggctgcg gattcaaaaa cttttaaaat ctatccggag cacatacttc tgggtgtgct
     8641 tgagacaaaa tcaaatatct gctcaaggct tctggcctac ggcggtatga acgcagatga
     8701 ctttagggag tatgtttaca aaaagtacag cgatgtttct cacgagttta tgcacacaaa
     8761 tattgcattc agtgaggcct cgcaaaaact catcaagctt gcatcagagc ttgcaaaaaa
     8821 gaaaaactct tacataatgt ccgagcacat tctgcttgca cttattctta ctgcggaatc
     8881 tgcaaagtcc gagctgctcc aagattttaa ccgctacggc gttgatatcg aaaaactcaa
     8941 acagacactt ttaaaactta ttgaaaaaaa taacaaaaag aatgaaatcc accccgagct
     9001 ggaaagaaaa aaagataaaa gcgagtattc tactgtccag tctattttta aagaagggga
     9061 cgcaaaagac attctcgagc gtgcggtggc aaagcttacc gcttctcatt acgagattct
     9121 aggcacagag cagattgtgc aatccatact ggaagataca aattcggatt tgacaaagct
     9181 tttaaatgaa tcaggcattg accttgaaaa gtatacgggc aaactgcagg aggtgtcctc
     9241 gcgtcaggcc gagtttgaag aaaaacagat tatttttacg cccaatgcgt ttaagacaat
     9301 gcttcttgct tttgaaaccg ccaaagagct cggttctgct agcgtaaaac ccgaacacat
     9361 tatactcggt gtattaaaag caaaaagcgg tattgcgtat aacattttta aagagctgca
     9421 tattcaagat gatgatctgg ctcacaaaat aattaaacca atcgaaaaac aaatgcccga
     9481 aactcttaca attctgcgtc ttgcaaaacg tgaagcacag agcatgaaca gaaacattgt
     9541 aggcagtgag tttatactgc tgggcataat aggagaaggc gctggaattg gtgcaaaagt
     9601 gctttcgcag cttggtatca caataaaaga cgcacgcata gaagtggaaa aagtccttgg
     9661 ctatggaaac tcttacacat ttggcgaggt tgttttctcc gaccgtgcaa aaaaaatact
     9721 cgaaattgca tgggaaaaag cacaaaaaca caaaaacaca aaaattgcat cagagaacct
     9781 tttgtgggca attacacaaa cgcctgattc tgttgcaatg caggttttat caaacctcgg
     9841 tgttgacgtg cttgaagtta atcagggtat tttaaaagag ctggaagaat taaaaagcag
     9901 cgaggcttaa acttccaaaa acagctttct tcccacaata tttggctttc cgttgtaata
     9961 gcctgcaaag tagccgcctc ttaccggatt gttttttccg tagaagtttg aacttatgga
    10021 ggagttagcc ataaacggat tggatgattg tccggctgca aaagggttaa cagatgccgg
    10081 tctcacagca gaaattgcag tggagcgagt tggggttaat gtttttgaaa tcaatcctaa
    10141 aagattttgt atcatggcaa tcctttcaac ggatggtggg gcttattcga cctgaccgaa
    10201 tcctaattta ctaacaattt atatatacga ataaatcaga ttctgtcatg tttattataa
    10261 tacattatta aaatttgtta agtaattttt attaaaaatc nnnnnnnntg catacaagcc
    10321 ccgaaagtgc cagaatataa taacacggga gataaaatca tgataaaaaa atgccctttt
    10381 aattttgacg aatgtacgcc gcagtgtgct ttgtttattg cacctgatga tttgaacgag
    10441 cttgttgcaa acaggctgac gagtgttggc gtctatgaca aacaccatgg catgtgctct
    10501 tttaaaaacc aggcacttgc taaaagcaga gaaatatttg aaaaaagtca ggtaaataag
    10561 ttttaannnn nnnntattat acttgtaata taagcaatta agcagaaagc gaattataag
    10621 caaattatga gcgaattaag cctcggccag tttataaaaa acgtatttga ttacagtaca
    10681 ggaaaacccg tccagcagca gcccggtaaa gttgccaacg agaattttca gcgtgctcaa
    10741 aatgaagcta tgaaaatggt tcaacagact gcccagaata tcacccagaa ttttgtgcgc
    10801 cagcaggata ttttgaatac acagatgatg ttaaaggagt tgtctaatgt tgaacgctca
    10861 tggcttatga aaaacatgtt taattttcct gaaaacttga gccagctgat agaacagatt
    10921 gttacacagg gtaaaacagt tacagcacag gaacttgctg cgttgatgaa acaggatatt
    10981 gatatttcaa aaatccttgt gcttttgcaa acaaacggca aagcagcgct tgaaaaactg
    11041 caaaaaatga ttaccacaat gaatcaatcc ggtatctatg acacccgcca gctcaaagaa
    11101 atgtctgtgc ttatcaacgc ctgtatcccc gcaaatgacg cttctcaggc gcaaatttta
    11161 aaaagcctta tggtaatgta tttgccgtgg cttcctttaa atgaaagtgc aggttttaat
    11221 tttggcgcag attctgctga ggaaggtaaa aaaggtgcag gcgaagagtc gattaccatt
    11281 atcatcacaa cgaaaaacta cggtgaaata aaagtctttt tgttcatggc gcaaaacggt
    11341 gtaaatatgg atgttacctg cagcgatgat tttccaaagg aacgttttaa cgaagcaata
    11401 aaaggcgaaa atgcgattca cctgtctgaa aaccctgttt acactacaag gaaatcaagc
    11461 tctgatgaag atgcaaaaga gcttaaggtg gagttttcaa aatcagcaaa aattacaccg
    11521 cagctgctca ttatcgtgca tgcgattata aaaatagtta cagagctcga cagtaccggc
    11581 acccttcagg aaaaaagaaa agaagagctg taattagttt agcgcatgtt ctttttcttc
    11641 ttttaaagcg cgttcgtagt tgtatgcttt taaaaaacgg gcttttagca tgtcattaac
    11701 tgtttcgtat ttttgatatt gtaaattttc tgttcgatcc gcgtattttt tcattatttc
    11761 agtgcagcct tttctctttc tgctttttct aatttgttgt cgtagtctat tctgcctatt
    11821 agtttgttga ggtgtctttg tacttcttta aacatcggaa gactcaggct ctgtgctccg
    11881 tcagaagacg cgttgtcagg gtcgttgtgg atttctatca tcagaccgtg cgcacctgcc
    11941 ataagtgccg ccttgctcat aggttcaatc aggtatcttc tgcctgttcc gtggctgggg
    12001 tctgctatga caggtagatg tgagaatttt ttgataatgg gtattgccgc aatatcaagc
    12061 gtgtttcttg taaaagtaga gtcaaaacct tttacccctc tttcacaaag gattacgttg
    12121 ccgttatcgt ttgccatgat gtgctctgct gcaaggagaa actctctaat tgttgcagca
    12181 gggcctcttt ttaagagtac gggcttgcct gctgtgccca ctgcttttaa tagtttaaag
    12241 ttttgcatgt ttcttgcgcc aatctggatt aagtcaacat aatcacagaa catatcaaca
    12301 tctgctgtgt ccatgacttc tgacacaacg agcatattag ttttttctgc cgcttctttg
    12361 aggtattgca gccctttttc acccagcccg tcaaagtcgt agggtgaggt tctgggtttg
    12421 aaagcaccgc ctcttaaaaa ttcacagccc atttcttttg cagctgtagc tacttccata
    12481 agccagctga aatctttttc tacggaacac gggccgacca tcataacagg tctttcgagc
    12541 ccgccgattt ttacaccgtt tttaaattca acaactgtat cttcttcttt tgattctctt
    12601 gacgccagtt tgtagggttc ttgtatgagt tttacttctc ttacaccgtc aaaagacgca
    12661 acggattgcg gctcgataag tcttttgtcg cctattgccg caagtactgt cattacatcg
    12721 ccgtggttta aaacaatttt aaacccttta ttttccatgt atctttttac tgcattgatt
    12781 tgttcaacgg tagcctttgg ttccattatt attatcatgt ttcgtgcttt ccccttttgc
    12841 tttttgttta aactaaactt aaatctataa ttttatccgg tgcaatgatt tcccattttt
    12901 cattgcctgt aatcgaggat tttattacgg tgttttctgc tgcaaccaca ttttttagcg
    12961 tcacgttgtc tgcaacaatt gtgttatccc ataaaatgac gttgtctaaa gagacgtttt
    13021 tgccaatttt acagttgctt ccgataacgg cattgtttga tatttttaca gattcaccta
    13081 aaaccgtatt ttttctgcat acataaacag catcatattt tttgataata ttaggctgcg
    13141 gtatcatcac ttttctgtgc agtgcgtcaa tgttagattc aatgtactgt tcaatcgagc
    13201 ctatgtcaga ccagtaagag tagattctgt atgtatttat tttttcgcct gctttaagaa
    13261 gtgcggggaa tacgtttttt gcaaagtcat atttttcgcc tttgggtata aagtcaaaaa
    13321 tccttttgtt aaacacataa atacctgtgt ttataaaatt gctttttgct tcattcacag
    13381 ggggtttttc ctgaaactca atcactctgt gctcgggtga agaaacaact acgccgtatt
    13441 ttgatacttc gttgtgctca acagcagaga ttgccattgt tgcaatgcag ccggattctt
    13501 tgtgagagcg cataactttt tctaaatccg cgtcatgcag cccgtctgcg ctaactacta
    13561 gaaaatcttc ttctccttca aaaaaggatt cgcatttttt tactccgccg gctgtgcctg
    13621 acaggtcggt ttctcttata aaagaaaaat ctatgtcgac tggtgaattt tttgaatatc
    13681 tgtcttcaat ttgttgggcc agatagtggg tgtttgcaat aactttttct atcccgtagc
    13741 ttttcaattt ttgcaaaagg atatccatta caggcttgtt taaaacaggc acaagcggtt
    13801 ttgggacgtt ttgagtaagc ggttccagtc tggaacctac acctgctgcc ataaccattg
    13861 cctttgttat caaaactcct gtctccccgt aaattcttga cttaacaaaa ttgtattatg
    13921 aaaagtgcgt tataacacaa tttgtgaaca tataatttac atttctttca tattttttca
    13981 cttttagaag actttggtga tagaatatat aaaaaattat ttttgaaagg acaaaaatgt
    14041 tagacttaac tcagacatat gaagttgtta ttttttcaat aggcgacaca aaagccggaa
    14101 caaaaatggg caaactccag ctcaaaaatt tggctgacga ttcagtttta aactgcattt
    14161 tgtgggagga agcacttaac agaattgacg gaaaagtttt tagaacaggc aaccaggtaa
    14221 agattctcgg cgggtcttat aacgaaaaat ataacaactg tcttatcaca agcgttgagc
    14281 ttgttaaaga ggcaaaactc ggactggata aagatgaacg cgataaactt tttaacgcta
    14341 ttgtggaata cgcaaacgaa atagaagacg aagagctcaa aaaatacgtt acagaactgt
    14401 tgtttgagca cgaagaacag tttaaaatcg cacctgcggc aagactgatg caccacaact
    14461 atcttggcgg ccttgtggag catacgtttg agtgtcttga aattgcaaaa tgccttataa
    14521 gcaatcttta taaaaaagtg gacaaatcat gcgtgtttgc tgcatgcatt ttgcatgatt
    14581 tcggcaaaat ttttgaatat aaaattgata cggaatcagg actgattgaa tacgacgaaa
    14641 aatttcctaa agagtnncta actcattcac aatggggctt ttcaaactgc atggctcacg
    14701 ggtttaaaac cgttgcaaaa atgattgctg cccatcacgg acgcgcagaa tggggcgcta
    14761 ttgttgattt gaacgaaaaa gaccttgacc ctttgttgta tcttgtgcac catatcgatg
    14821 atttgagcgc aaaattcggc agaaccgcaa taagcgacct tggttaaata taataaaaaa
    14881 ccggataatt tatccggtta ataatcaagc aataagaaat ttggtttata gttaggtttg
    14941 tttttaaatt tgtgtgcaaa cattaagcga agatgttgat aactttttct tcctgttttt
    15001 cttttccttt gtttgtgttc atagagttga aagaaaaagg gtttgaacct cttttgtctt
    15061 tgtctaagtt tttagaattt gttaattcga ttgttccggg aaggttgaaa acgtttctga
    15121 tttcagattt ttcgccttct gcaactggtg caatcaattt accttcgaca tttttttgta
    15181 ctttgtttgt gcccattgct gccattgtgt tgaggtattg aacgtttgca atgaaattct
    15241 ggtttaagtt gatatcaagg ccggcatttc ttactgcaac aaattttgct gtatcaacat
    15301 ttgttctttg gctgtacaaa tcgatgccta cttcaggtct tctgaattta gaaagatcaa
    15361 caacgtttgt gtcgatagaa gttgattttg catcagcttt tgtaaagatt tgctttgcaa
    15421 cttcattgat agctgaagta tcgatataat ttctgttagt gtttaaagtt acgccaagac
    15481 tcatttttta tcatacccct tattgcttgt actttttata tcggcaattt ggattggaaa
    15541 ctttataatt tttaagttat aatttacata agtttacaat tcgtgttata atcggaaaaa
    15601 acataattga ggtaatgaaa tgaataaaag tcaatctacg ggaatatgga tagttgttgt
    15661 actattgatt ctttgtctgg ggtcaatgct tttcccagga cagactacaa gtannnnnct
    15721 tacaaaggta aaaagcggac aaatcgaatc tgtccaaatt gacaaggata ccctgattgc
    15781 aaaaccaaaa gcaggtcagg cagaatctgt tactactgta atgaactcta aaaaacccgt
    15841 tcctgttcaa tacagagtga tgattccgat gaatgatttg agcctttatc aaa
//
LOCUS       DABS01000071            4427 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_17060, whole genome shotgun sequence.
ACCESSION   DABS01000071 DABS01000000
VERSION     DABS01000071.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4427)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4427)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4427
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..219
                     /locus_tag="CPT85_02745"
     CDS             <1..219
                     /locus_tag="CPT85_02745"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25149.1"
                     /translation="FFSKSQKKAVLKKMPVYAGIAVLCAVLSFVGVKMHNKKDIPVLK
                     NIQNEQSANKTDTFASSSKIFSSFSINY"
     gene            375..2442
                     /gene="fusA"
                     /locus_tag="CPT85_02750"
                     /pseudo
     CDS             375..2442
                     /gene="fusA"
                     /locus_tag="CPT85_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_682539.1"
                     /note="frameshifted; too many ambiguous residues; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
     assembly_gap    1544..1629
                     /estimated_length=86
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2537..3673
                     /locus_tag="CPT85_02755"
     CDS             2537..3673
                     /locus_tag="CPT85_02755"
                     /inference="COORDINATES: protein motif:HMM:PF04230.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25150.1"
                     /translation="MSKVKPFFINSNIHLKEFSYKTVEDILTPLGGNTGNSYITYGLM
                     KAVLGGICDIPHIQNIYTYDFSKSDKDIEIINNECTHVFFILQDQIRLFESYSLTLPY
                     TNIINFLKRLNKKVIVAGLGANCFSGFDKEFYKKLNPELVEFLRKLSEYCELIGLRGE
                     FTQEVMSKLGISNTEVIGCPSYFENGRDRIVHKKPFGELNIMQSSKNFTRSINNYHTV
                     LQDFNERDIIARLTLEDFTAPLQRKDEEKLCEDKFHVFADIESWKNFVSQFDFVFGYR
                     LHGSILALNSGAVALCCNHDSRATEMCNFLKIPHYTQLDDKKTIQEYYEMADVDALNR
                     AYPALFDNYKQFLNKNNIELFEDNPQPYEYIKQPVVPLFSHKQQ"
     gene            complement(3700..>4427)
                     /locus_tag="CPT85_02760"
     CDS             complement(3700..>4427)
                     /locus_tag="CPT85_02760"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25151.1"
                     /translation="DNYTFVAFSKNWYRPDPIEGAHRMQISAPTEKEEAAYRKYLKRI
                     KADPLHIVKHFEETGKKTVITDYICSGKRICSFLEIMSNYADDLGILEKFSKSIQIVG
                     IGSYDYMEELNPYADIIETPKAMLPEKLIPYKKDIKQEFYDMDYNMFREMLINQNTNE
                     CRSTYFPHETWTVYNPDRFKTGLVTDIKKVKSKLKELKESGEKSMSSFSPAMYDFRNL
                     LNFRILDGLNERGLLKDKHKSKV"
BASE COUNT         1429 a          734 c          841 g         1337 t
ORIGIN      
        1 tttttttcta aatcacaaaa aaaagctgtt ttgaaaaaaa tgcctgttta tgcaggaatt
       61 gctgttttgt gtgctgtgct gtcttttgtg ggtgtaaaaa tgcataataa aaaggatata
      121 cctgtattaa aaaatattca aaatgaacaa tctgctaata aaacagatac attcgccagc
      181 agctcaaaaa tattttcatc ttttagtata aattattaaa aggtattaaa ggcaacaata
      241 cttaattttt tctttaaaaa atttcatttt tatgcaagaa tttttataag atagcattat
      301 gctgtcttat aaagttgtca cataataaat gacaaataat agtagtacta gttaaataaa
      361 aaaggaaaaa cgaaatggca agacaagtcc cattggaaaa agttagaaac ttcgggattg
      421 cagctcacat cgacgccggt aaaacaacta caacagaacg tatcttgttt tatacaggta
      481 aaactcacaa attaggtgaa gtacacgatg gtgcggcagt taccgacttt atggatcaag
      541 agcgtgaacg tggtatcact atccaatcag ctgctgttac agctatgtgg aatggtcacc
      601 aattaaacat catcgacaca cccggccacg ttgacttcac tatcgaagta gaacgttcac
      661 tgcgtgtatt agacggtgtt gtatccgtat tctgtgcggt tggtggtgtt caatctcaat
      721 ctgaaacagt ttggagacag gctaacagat acgaagttcc tcgtatggta tttgtaaaca
      781 aaatggacag aacaggtgct aacttctacc gtgttcttga acaattgaga aacagactgg
      841 gtgcaaatgc tcatcctatc caattaccta tcggtgcaga agaccagttc aaaggtatta
      901 tcgatcttat tgatatgaaa gctcacatct acactaacga tttgggtact gatatcaaag
      961 ttgaagatat tccggctgac atgttagaca aagctaacga atatcacgca gctttagttg
     1021 aagctatttc tgaacacgat gatgaattga tgatgaaatt cctcgaaggt gaagaaccta
     1081 caatggaaga gcttaaaaga gtacttagaa aagcaacttg cgaaaacaaa attgttccta
     1141 tgtgctgtgg tacagcgttt aaaaacaaag gtgttcaatt gttgttagac aatgttgtta
     1201 actaccttcc ttctcctgta gatgtaaaag ctattgaagg cgaattggaa gatggtacaa
     1261 aagttgaaag acactcttca gaagacgaac cttttgcagc actcgcattc aaagttatga
     1321 ctgaccctta tgttggtcgt ttgacattct tgcgtgtata ctcaggtaaa ttgacagcag
     1381 gttcttatgt tcttaacgct actaacggta aaaaagaacg tatttcaaga cttgtacaaa
     1441 tgtacgctga tcaaagaaat gaaatccaag aagtttacgc aggcgacatt tgcgcagctg
     1501 ttggtttgaa agacacaaca acaggtgata cactttgtga tgcnnnnnnn nnnnnnnnnn
     1561 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1621 nnnnnnnnnc ttcaaaaact tgctgaagaa gatccttctt tccgtgttaa atctgataca
     1681 gaaacaggcc agacaatcat ctccggtatg ggtgagttac acttagacat catcgttgac
     1741 agacttttaa gagaattcaa agttgacgct aacgttggta aaccacaggt tgcttaccgt
     1801 gaaactatca gaggcaatgc tgaccaggat tctaaattca tccgtcaatc aggtggtaaa
     1861 ggtcaatacg gtcacgttaa aatccaaatc gaacctgctg aagaaaatgc aggattcgtg
     1921 ttcgaaaaca aaatcgttgg tggtgctatt cctagagaat acatcgaacc tgcaagaaaa
     1981 ggtatggaag aagctcttga aggcggcgta ctcgcaggat tcccgatgat tgacgttaaa
     2041 gttacacttt acgatggttc ttaccacgaa gttgactctt ctgaaatggc gtttaaaatc
     2101 gcaggttcta tggctatcaa agaaggtact aaaaaagcta aaccttgtat cttagaacct
     2161 atgatgaaag ttgaaatcga agtacctgaa gaaaatacag gtgatatcgt aggcgacatc
     2221 gcttcaagaa gaggccgtat cgaaggtatg gaaattatcg aaggtactgg aatccaaaaa
     2281 atcagagcaa tggttccgct tgctgaaatg ttcggttatg ctacagacat ccgttcaaaa
     2341 actcaaggac gtggtacatt ctctatggaa tttgctaaat acgaacaggt tcctgctaac
     2401 gtagaaaaag aaatcataga aaaatcaggc gctactgctt agttttctaa ggttataaat
     2461 ttaaaacagg ctttgattat tcaaggcctg ttttttaatg tataatttta aaaaataaaa
     2521 gttgaaggag attactgtgt caaaggtaaa gccttttttt atcaacagca atatacattt
     2581 aaaagaattt tcttacaaaa ctgtagaaga tattctcact ccgcttggcg ggaataccgg
     2641 aaactcctac atcacttatg gattgatgaa agctgtgttg ggtggaattt gtgacatacc
     2701 tcatatccaa aatatttata cgtatgattt ttctaaaagt gataaagata tagaaatcat
     2761 aaataacgaa tgtacgcatg tgttttttat cttgcaggac cagataaggc tttttgagtc
     2821 gtattcttta accttgccat atacaaatat cataaatttt ttaaaacggc ttaataaaaa
     2881 agttatagta gcaggcctgg gtgccaactg ttttagcggg tttgacaaag agttctacaa
     2941 aaaattgaac cctgagcttg tagaattttt gcgtaaattg tctgaatatt gtgagctcat
     3001 aggtctgaga ggtgagttta ctcaggaggt aatgtcaaaa ctcggtatat caaacacgga
     3061 agtcatcggc tgtccatctt attttgaaaa cggcagagac aggattgtgc ataaaaaacc
     3121 ttttggtgag ttaaacatca tgcagtccag caaaaacttt acaaggagca taaacaatta
     3181 tcatacggta ttgcaggatt ttaacgaaag agacattatt gcaaggctta cgcttgagga
     3241 tttcaccgct cctttgcaaa gaaaagatga agaaaaattg tgcgaagata aattccatgt
     3301 ttttgcggat attgaaagct ggaaaaattt tgtatcacag tttgattttg tgtttggata
     3361 caggctccac ggctcaatac tggccttgaa ctctggcgct gttgctcttt gttgtaatca
     3421 tgattccaga gcaacagaaa tgtgcaattt tcttaaaatt ccacattata cccagctgga
     3481 tgacaaaaaa actattcaag aatattatga aatggcagat gttgatgctc ttaaccgtgc
     3541 ttatccagct ttgtttgaca attacaaaca atttttaaac aaaaacaaca ttgagctgtt
     3601 tgaggacaat ccacagcctt atgagtatat aaaacagccg gtggttcctt tgttttctca
     3661 caaacaacag tagctataag ggatttaaat aaacataacc taaacttttg atttatgttt
     3721 atctttgagc aatcctcttt catttaaccc atcaaggatt ctaaagttta aaaggttacg
     3781 aaaatcgtac atagctggag agaaggatga catggatttt tcacctgatt cttttagctc
     3841 ttttagtttt gattttactt tttttatgtc tgtaaccagc cctgttttaa atcggtcggg
     3901 attatataca gtccaagttt catgagggaa gtatgttgag cggcattcat ttgtattctg
     3961 gtttatcaac atctctctga acatattata gtccatatca taaaattctt gttttatatc
     4021 ttttttgtat ggaattaatt tttcaggtaa cattgcttta ggcgtctcaa taatatcagc
     4081 gtaaggatta agctcttcca tgtaatcata agaacctata ccaacaattt gaattgattt
     4141 tgagaatttt tctaaaatac ctaaatcgtc agcataatta gacataattt ccaaaaatga
     4201 gcaaatgcgt ttacctgaac aaatatagtc tgtgataacg gttttcttgc cggtttcttc
     4261 aaaatgcttt acaatatgca gtggatcagc ttttattctt ttcaggtatt ttctatatgc
     4321 agcttcttct ttttctgttg gggcggatat ttgcattcta tgtgcgcctt caatggggtc
     4381 aggacggtac cagttttttg aaaaagcaac aaaggtatag ttgtcta
//
LOCUS       DABS01000072           10518 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_14130, whole genome shotgun sequence.
ACCESSION   DABS01000072 DABS01000000
VERSION     DABS01000072.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10518)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10518)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10518
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            717..932
                     /locus_tag="CPT85_02765"
     CDS             717..932
                     /locus_tag="CPT85_02765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002596143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="DAB25023.1"
                     /translation="MNNFKNEIKAQITRSGHTMTQLVALLNQKYGKKTTVQNISNKLT
                     RETISHKEILEIADVLGYEIIWKEKNN"
     gene            complement(935..1369)
                     /locus_tag="CPT85_02770"
     CDS             complement(935..1369)
                     /locus_tag="CPT85_02770"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25024.1"
                     /translation="MYKKDNIIAILGFISLCCLSLKCNIKITENDITNFITFLSIYTG
                     FLATSFSIMSGNTQIKKLRKIKDSENPALTLLHRLTKYYQFVFIVSLLTILLLLLTNM
                     LNIFLITNIIILGLMFLILYSSYTVIKILFDIFTGKIVVENI"
     gene            complement(1362..2165)
                     /locus_tag="CPT85_02775"
     CDS             complement(1362..2165)
                     /locus_tag="CPT85_02775"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25025.1"
                     /translation="MDTIKFTNFSLFIKEDFNFRALAINDLTDIMLQGNITFEDGENL
                     YYLNIELIDNKYLWLCARYGNPSPCPKEIYDKNIKDFDTNKRTENQVEMRNQLFALYD
                     FDKSLLFCNNSRKTSFLEKYFRKLLDNDVIIKTVFVDIETFRDKIKEIRSIKFKSLSN
                     IFTQNGILNKAFKDVLGDNDVNFELTLNYNFPSFVDKIDLFRRLKNIVASRQAENLIL
                     IGIDDNDFEQVYNTGSFSKKIEIFYEPNEEGLKDEKYILKELLEKVANV"
     gene            2615..3133
                     /locus_tag="CPT85_02780"
     CDS             2615..3133
                     /locus_tag="CPT85_02780"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25026.1"
                     /translation="MLCIKNQQLLFKIYTGADQKSNKTMSIVKDLAILQYLTDTLITQ
                     KGVSAALNFTTGAINNRIIRGGNFKPEEKKELENFYGISFADFKESTPNTYERQNDET
                     VYERLSQVGKRLQEIQDKHNFLNREMAQLLKISERQYAQLKVGKMEPTISILNELKRN
                     FVVDIDRLMYGE"
     gene            complement(3174..3596)
                     /locus_tag="CPT85_02785"
     CDS             complement(3174..3596)
                     /locus_tag="CPT85_02785"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25027.1"
                     /translation="MKVKEPVYEKSGNVNIPELDKELPSFSFRYIVNQDNYNLESKKA
                     SHQLKAKVLHSLHKYSKQTWVDFIGDKKRTGVEQIGLSNLKKLKVNLPKTGFYSEIKK
                     VAVFRVSNNEARIVGWRHKHICYILWIDWDFTSYDHGS"
     gene            complement(3598..4056)
                     /locus_tag="CPT85_02790"
     CDS             complement(3598..4056)
                     /locus_tag="CPT85_02790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015208860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25028.1"
                     /translation="MNSYKIPVEEVANYFLSKLDAETEDCISNLKLQKLVYYAQGFVM
                     ALKDKKLFDEPIEAWEHGPVVNCLYQKYKKNGASAITRKENEDFDYSKLSEHPDLMDI
                     LDDVYKVYGQFSAWRLRDMTHQETPWLETVRNEKISDGLMLAFFKTQIVE"
     gene            complement(4294..4590)
                     /locus_tag="CPT85_02795"
     CDS             complement(4294..4590)
                     /locus_tag="CPT85_02795"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25029.1"
                     /translation="MKNSIGLLLTEVQEFLCSEVNRVFAAIVILCILVCYGQVRTEKE
                     IKKVYNYNVKAKKELLTEINTNRDKIHFRYFNLSRSLEEINNVKIDTKNGKLEK"
     assembly_gap    4601..4603
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    4870..4895
                     /estimated_length=26
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5013..5264
                     /locus_tag="CPT85_02800"
     CDS             5013..5264
                     /locus_tag="CPT85_02800"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25030.1"
                     /translation="MFKTSCFIGARAKTEKERFIRRIEHKKNNTKQGSFSNQNVFYGD
                     FLKTRKKDSKGNPIYEQTRKNFNGQYEILNTIHTNYSTM"
     gene            complement(5401..>5683)
                     /locus_tag="CPT85_02805"
     CDS             complement(5401..>5683)
                     /locus_tag="CPT85_02805"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25031.1"
                     /translation="RNSIKESISAVEALCRKFTGESTLDKSLKKLESKGLVLNPQLKA
                     GLEKIYFYTNSEGGLRHSLLDESKVDQADAKFMLVSCSAFVNYIISKLA"
     assembly_gap    5684..5734
                     /estimated_length=51
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<5735..6205)
                     /locus_tag="CPT85_02810"
     CDS             complement(<5735..6205)
                     /locus_tag="CPT85_02810"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25032.1"
                     /translation="MNTFSKRYGYEKIKEFQVQSLDNETRNLLWSMFWKICNTTPAVV
                     QSLPGFAEYIWVDFLKNRIDEFPCYKTGTGLSLNTHPDYSFLKNIFVYYEWYKVYDLI
                     EEFYRYFGYKSIKNKINEILEKENCAYRLVDSNIVEITAECEIKEIEKAAASNND"
     gene            6268..6660
                     /locus_tag="CPT85_02815"
     CDS             6268..6660
                     /locus_tag="CPT85_02815"
                     /inference="COORDINATES: protein motif:HMM:PF16677.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25033.1"
                     /translation="MTGRPKKFKTVKALQKLIDAYFDDCEANKKHVTLTGLALWLDTT
                     RETLMDYQKNDEYSDTIKRAKLRIENAYEMRLIDRGNGGDIFALKQFGWSDKHEVTTA
                     PAENTRKAYLEAMAGMNADKMGEQQIQP"
     gene            6623..7921
                     /locus_tag="CPT85_02820"
     CDS             6623..7921
                     /locus_tag="CPT85_02820"
                     /inference="COORDINATES: protein motif:HMM:TIGR01547"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="DAB25034.1"
                     /translation="MPIKWENSKYSLKARAFLAKQPQDFPLLTLLDGAVRSGKTLNIV
                     QKIPQIFDSIGNENLKVFSGYSKSTVRNNVLIELKPFIENYLGGNFKYNSASGELDIT
                     LFGKVYNCLVVGGGKSDSSSAIQGGTWDFWYANELPQHHYSFYNMALSRLTPANARAF
                     ADSNPESSNHWLYQEKIKPYLEGNQDVKDVFEYWHFTMHDNANLSDVFIRNQEKLYTG
                     AFKARKINGLWIVADGLVYDTFKVEKHTLPHLEILEKIQSGEIVEFFLGVDWGWVHPT
                     AVTLFGFSKYGVYYQIDELYGPKIEADSVINWIEQKQNEYQRFFSFTNCDNARPEQND
                     KLRNSLGLVVYEAKPKVEDSIALVRSVINYDRLIVSDRCVHTLQEYATYRYPSEDERL
                     KSTVQADLPIKLNDDCMDSSRYALFKHLTTYNNFGAGLRA"
     gene            8011..9390
                     /locus_tag="CPT85_02825"
     CDS             8011..9390
                     /locus_tag="CPT85_02825"
                     /inference="COORDINATES: protein motif:HMM:PF05133.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25035.1"
                     /translation="MLTNFDTREIIKKLKQDSTETKRFVDYKRYRELYRSEFAAPFAS
                     VLMKIRKRYPLQDTTAQSLVEINLFKALTDFFKFLTTNNDFEIVTDKQEIWDKISEEN
                     NFISVLKEVCIDNSRFGNGLFKLAFVDDKVKIFSVCPDCWFPVFNNGNLNDLAGHILI
                     YDIEKDAKAYKHIEKIHKGYIENEVWMVSNGELSAQVENVRDFGLVEIDDFSDKWDDF
                     VLFPVKNTSESDCYYGESDYKSCESIVEEIMLTVSQNSKIINRHANPKLAGSLENTQL
                     NPVTGERYFPNSDFVKIGSDGQKPEYITADLQSEAIKAHINTLMQFFYILTKTPPQAY
                     GVDLSGNMSGESLQKIFMSAVAKVEDIRAVSLNNAIKKLVKCALAFSGAKDADVSVNW
                     GNAIKLDYTEVVKTCNDRVLAGTQSKLSAIKQMDKATDEQAEEELKQIQEEQKADAAV
                     PIEDVMIDD"
     gene            9383..10273
                     /locus_tag="CPT85_02830"
     CDS             9383..10273
                     /locus_tag="CPT85_02830"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25036.1"
                     /translation="MTNEIRKIQLKQKKSLLKIYKKRLEEIKKSILELATSGGNTLKL
                     AIEKKKLEKLIQKLEQEFKEFSDEAIEESYRQGAQDQKKRISALGIAVIALASIQIAS
                     IENIYYSHLLRITKEIAAKVKSYVRTDFSDKHKVVQALNNLSQTGILSSEVDTERWQS
                     LMKRLEQNFKNKDIFTIPYFDKNGNVVRRVKASTYAEMLARTLCAQTFRKAAKDSILE
                     QFENEGDLVEILGESVYPDSPCIPYQGKVLSLTGRTKGYTTVKEAETNGLFHPNCIHS
                     FAVTEKVIDAYSQKDISLKA"
     gene            10293..>10518
                     /locus_tag="CPT85_02835"
     CDS             10293..>10518
                     /locus_tag="CPT85_02835"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB25037.1"
                     /translation="MSGTEEQNLNIQPGAEQAGSQSGTDNNAQIESLKEQISELRKEA
                     AKYRTSAKGKETVEEQLKILQEEFAKTKKEN"
BASE COUNT         3538 a         1799 c         1829 g         3272 t
ORIGIN      
        1 ctttggacgt aataagctat agtgcactgc ttattacgcc acgggaacgg ctctatgtcc
       61 gcctacgccc aaacctttat tagcgggctg tcacacgtaa atgcgtagcc ctgaaataaa
      121 agtttttcgc ctctctaaac cgctgttttg tgatttgaag ctgtcacggc ttcggcattg
      181 ccgtcgctta cacatttagc ggattttttc aagtatattc agttttcaaa gtacaagtgt
      241 ttataagttg gtaaattttt gttttatatg acaaattcag aggttgtcat gctgtttgct
      301 ccttatgctg tttgttttcc tagttctaaa tcagctaact cataaactaa ttgtgctatt
      361 ttttgtcttt tctcttcctc tgtatatttt ttttcattaa aatatacttt gacccttata
      421 ccgtctattt ctttgtctac taagtatttt ttgttcattt gttagttgat ttttcttttt
      481 gtgacttttg taaattttgc attattcagt tttaggtttt tacatcttct ttgttttgat
      541 agaccaaatt ttcattgcaa aataaaggca ctataagtaa gcaccttgcc ttcgcagatg
      601 ttttaagtta aaattgtttg gtaaacaaat aaaaatatac ttttgagttt tattatacac
      661 tctcgtgaat aaaagtcaac agttttttat tcaaattagt gaaaaaggtt actaaaatga
      721 ataatttcaa aaatgaaatc aaagcacaaa ttactcgcag tggccataca atgacacagc
      781 tagttgcgct tttaaaccaa aaatatggta agaaaactac agttcagaat ataagtaata
      841 aacttacacg tgaaactatt tctcacaaag aaattcttga aattgctgac gtcctcggct
      901 acgagattat ttggaaagag aaaaacaact aaatttaaat attttctact acgatttttc
      961 ctgtaaagat atcaaacaat atttttatta cagtatatga actatataga attaaaaaca
     1021 ttaaacccaa tattattatg tttgtaatta aaaatatatt tagcatgttc gtcaataata
     1081 ataaaagtat agttaataaa gagacaataa agacaaattg atagtatttc gtaagtctat
     1141 gtaagagtgt taatgcggga ttttcactgt cttttatttt cctaagcttt tttatctgcg
     1201 tatttcctga cataatagaa aaacttgtag ccaagaaacc tgtataaatt gaaagaaatg
     1261 ttataaagtt tgttatatca ttttctgtta tcttgatatt gcatttaagg cttaagcaac
     1321 aaagactaat aaatcccagt atagcaataa tattatcttt tttatacatt agcgaccttt
     1381 tctagtaatt ctttgagtat atatttttca tcttttaaac cttcttcatt aggttcataa
     1441 aaaatttcaa tcttttttga aaaacttcct gtattgtata cctgttcaaa atcattatcg
     1501 tcaattccta taagaattaa attttcagct tgtcttgatg caacaatatt ttttaaacgg
     1561 cgaaataaat ctattttatc aacaaaacta gggaaattgt aattaagtgt taactcaaaa
     1621 tttacatcat tatcacctaa aacatcttta aaagctttgt ttaaaattcc attttgagta
     1681 aaaatattac tcaatgattt aaattttata ctacgaattt ctttaatctt atccctaaat
     1741 gtttctatgt ctacaaatac tgtttttatt attacatcgt tatctaaaag tttcctgaaa
     1801 tatttttcta aaaatgatgt ttttctcgaa ttattacaga ataaaagtga tttatcaaaa
     1861 tcgtataagg caaataattg gtttctcatt tcaacctgat tttctgttct tttatttgta
     1921 tcaaagtctt ttatattttt gtcatagatc tcttttggac aaggtgaagg gtttccgtat
     1981 ctggcacaaa gccatagata tttattatca attaattcta tattaagata ataaagattt
     2041 tctccatctt caaatgttat attaccttgt agcataatat cagttaaatc gtttattgct
     2101 aatgccctaa aattaaaatc ttctttgata aataaactga aatttgtgaa tttaattgta
     2161 tccataatgc ccccagttaa taatacaggc atgttatcat aatttctgta tatcaaaaac
     2221 taaagttttg attatttgaa tatttgtaac cacaagggtt ttggcatgtt ttagggatgg
     2281 gcggagtttc ccccgcccgg gtttgtttac caaatataaa atggtctatt caattttcaa
     2341 agagcgattg taaattttgc attacaaata gaccctttat aggagtcttt ttgttgtgtt
     2401 tttggtaaga tattcttacg gaattaaata aggggagaga cgtttaagcg attctctcct
     2461 tgttttgttc taaccataga ttgagagcct caacaattat attgctccgg tttttgccgt
     2521 aggcaacata agagttgata gtttctaata aatcttttgg aatagtaaac gatattgttt
     2581 ccatataatt tcctttcgat attgaaacaa tatcatgttg tgtataaaaa atcaacaact
     2641 tttgtttaaa atttacacag gagcagatca gaagagcaat aaaaccatga gtatagttaa
     2701 agatttggct attttacaat acttaacaga tacgctaatt acacaaaaag gtgtaagtgc
     2761 tgctcttaat tttacaacgg gtgctattaa caatagaatt attcgtggtg gcaacttcaa
     2821 accagaagaa aaaaaagaat tagaaaactt ttacggaatt tcttttgcgg attttaaaga
     2881 atctacccct aacacctacg aacgccaaaa tgacgaaaca gtctatgagc gtttatctca
     2941 agtcggcaaa aggcttcaag aaattcaaga caagcacaac tttttaaacc gagagatggc
     3001 acagctttta aaaatcagcg agcgccaata tgctcaactt aaagtcggca agatggagcc
     3061 gacaattagc attctcaatg agctcaaaag aaactttgtt gttgacattg accggttgat
     3121 gtatggggaa tgatgtgtca ttggattggc tggttaaagg ggagtaatta tatctatgaa
     3181 ccatggtcat aggaagtgaa atcccaatct atccataaga tgtagcaaat atgtttatgt
     3241 ctccagccaa caatcctagc ctcattattt gaaactctaa aaactgcgac ttttttaatt
     3301 tcactataaa agcctgtttt aggcaaattg acctttaatt tcttcaagtt gcttaagcct
     3361 atttgttcaa caccagttcg ttttttatca ccaataaaat caacccatgt ttgtttacta
     3421 tatttgtgga gactatgcag aacttttgct tttaactggt gagatgcttt tttactttca
     3481 agattataat tatcttgatt tactatgtat ctaaaactaa aagacggaag ttctttgtcc
     3541 agttcaggga tatttacgtt tcccgacttc tcataaacag gttctttaac tttcatgtta
     3601 ttctacaatt tgagtcttaa aaaatgctaa cattaatcca tcagaaattt tttcatttcg
     3661 taccgtttca agccatggtg tttcttggtg tgtcatatct ctcaagcgcc acgcagaaaa
     3721 ttgtccatat actttgtaaa catcatccaa aatatccatt aagtctggat gctcagacaa
     3781 tttactataa tcaaaatctt cattttcttt tcgtgttatt gcagaagccc catttttttt
     3841 atatttttga tataaacaat taacaacggg accgtgttcc caggcttcaa ttggctcgtc
     3901 aaaaagcttt ttatctttta atgccataac aaacccctgt gcataataca caagtttttg
     3961 taattttaag ttggaaatac aatcttctgt ttctgcatca agtttgctta aaaaataatt
     4021 agcaacttct tctacaggta tcttatagct attcatatga gccctctttc tggtttcatt
     4081 ataagctgaa ctttacataa agaaagtttg ttacttaaat atacattata tggagtattg
     4141 ggttatattt ctattttaac aaactaaata aaactattaa agctatttaa aaatttattt
     4201 ttacaaataa aacaaatatg tgtataaaac ctatgaggct actatatcat aaaaaatgta
     4261 cccatttggg tacattttat gtgttataat attctatttc tccaactttc cattctttgt
     4321 atcaatcttc acattgttaa tctcttcaag actccttgag agattaaaat acctgaaatg
     4381 aattttgtct ctgttggtgt taatttccgt tagtaattct ttttttgctt tgacattata
     4441 gttgtaaacc tttttaatct ctttttctgt gcgcacttgg ccataacaaa ctaaaataca
     4501 taaaataaca atggctgcaa acaccctgtt aacttcgctg cataaaaact cctggacttc
     4561 ggtcaataac aacccaatac tatttttcat aacttccctt nnnaactacc tcattatgct
     4621 tgcgcagcct gtaaaagaaa accattaatt aggcgtttta gttctcttta taaatttgta
     4681 tcatgattgg ttcgatcagc ttttaaacta tactgcatag gtggcaagtt taataaaact
     4741 tcatgaagta aagtaaaaaa aacaacattt tatatcgata cgtcataaac taatgctata
     4801 ataacaatag cccggtaaaa aatggggcag tcttaaatat cctgaaataa cggcggctgt
     4861 cagtagaggn nnnnnnnnnn nnnnnnnnnn nnnnnaacaa tgaactgtac gagcctgatt
     4921 gtgtatataa attaggttct aaatggcttg aatttgcgta ttgcggcata aacaaaacac
     4981 ctgttgcaag gatatttcac aaaacaaaga caatgtttaa gacttcgtgt tttatcggtg
     5041 cacgtgcaaa aactgaaaaa gagcgtttta tcagaagaat tgaacacaaa aagaacaata
     5101 caaaacaagg ctctttctca aatcaaaacg ttttttacgg agattttctt aaaacacgca
     5161 aaaaagatag taaaggtaac ccgatttacg aacaaacacg taaaaacttc aacggacaat
     5221 acgaaatcct aaatacaata catacaaact actcaactat gtagatgcag ttatgcaggg
     5281 tgaacatccc tcatttcgtc atattattca ccctgttttt tttagattat ggaaaaatta
     5341 gcaatactgg gcgattttac aaggatatga ggagattcag ggcagtatgt taatgtataa
     5401 ttaggcaagt tttgaaataa tataatttac aaaagcactg caagatacca gcataaactt
     5461 tgcatctgct tggtcaactt tagattcatc caacaatgaa tgcctgagcc cgccttctga
     5521 attggtataa aaataaattt tttctaaccc ggcttttaat tgaggattta gtacaagacc
     5581 tttgctttca agttttttta gagatttatc aagagtgctc tctcctgtga attttcgaca
     5641 taaagcttca acagcggata tagattcttt tatggaattt ctgnnnnnnn nnnnnnnnnn
     5701 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnatcatt attagaagcc gcagcttttt
     5761 caatttcctt tatttcacac tccgcagtta tttctacaat attagaatca actaatctgt
     5821 atgcacaatt ttctttctcc agaatttcat ttattttatt tttaatactt ttatacccaa
     5881 aatatctgta aaattcttcg atcagatcat aaaccttgta ccattcataa tatacaaaga
     5941 tattttttag aaatgagtag tctgggtgtg tatttaaact caaacctgtt cctgttttgt
     6001 agcaaggaaa ttcatctatt ctgtttttta aaaaatcaac ccatatatac tctgcaaacc
     6061 caggcaaact ctgcacaaca gccggcgtag tattgcatat tttccagaac atactccata
     6121 acaaatttct tgtttcattg tctaatgatt ggacttgaaa ctctttgatt ttttcatacc
     6181 catatctttt tgaaaatgta ttcatgccaa aacctttgat ttaagacctt ataagtataa
     6241 tatcatgata ataaacaatt aaaatctatg acaggaagac ctaaaaaatt taaaacagtt
     6301 aaagcgcttc aaaaacttat tgatgcatat tttgatgact gtgaagcaaa caaaaaacat
     6361 gtaaccctta cagggcttgc gctgtggctt gataccacac gtgaaacgct tatggattat
     6421 caaaagaatg atgaatattc tgacacgata aaaagagcaa aattaagaat tgaaaacgct
     6481 tatgaaatgc ggctgattga cagaggaaac ggtggcgata tttttgcact gaaacagttt
     6541 ggttggtcgg acaaacatga agtaacaact gcacctgcgg agaatacaag aaaagcctac
     6601 ttagaagcaa tggcaggtat gaatgccgat aaaatgggag aacagcaaat acagccttaa
     6661 agccagagca tttcttgcga aacagcctca ggattttcct ttgctcacac tcttagacgg
     6721 tgctgtcagg agcggaaaaa ccttaaacat agtgcaaaag attccgcaaa tatttgactc
     6781 aatcggaaat gaaaacctca aggtgttttc gggttattca aaaagcactg tgagaaacaa
     6841 cgtgctgatt gaacttaaac cgttcattga aaactatctc gggggaaatt ttaagtataa
     6901 cagcgcatcg ggcgaactgg acatcacact gtttggcaaa gtatataact gtcttgtggt
     6961 ggggggcgga aagtctgaca gctcgtcggc aattcaaggc ggaacgtggg atttttggta
     7021 tgcaaacgag ctgccgcagc atcattacag cttttacaat atggcgctca gccgtctgac
     7081 accggcaaat gcaagagcct ttgcggacag caaccccgaa agctctaacc actggcttta
     7141 tcaggagaaa atcaagcctt atcttgaggg gaatcaagat gtaaaagatg tttttgaata
     7201 ctggcatttt acaatgcacg acaatgcaaa tttgtcggat gtttttatac ggaatcagga
     7261 aaaactttat acaggggcat ttaaggctcg aaaaataaac gggctgtgga ttgtcgctga
     7321 cgggcttgta tatgacactt tcaaggttga aaaacatacg ctgccgcatt tagagattct
     7381 ggaaaaaatc cagagcggcg agattgtgga gtttttcctc ggcgtggact gggggtgggt
     7441 gcatcctacg gcggttacac ttttcggttt ttcaaaatac ggtgtgtatt atcagattga
     7501 tgagctttac ggtccaaaga tagaagcgga cagtgtaata aactggatag agcagaaaca
     7561 aaacgagtat cagcggtttt tcagctttac aaactgcgat aacgccagac ccgagcaaaa
     7621 cgataaattg cgaaacagcc tcgggcttgt tgtttatgag gcaaaaccca aagtcgagga
     7681 cagcattgca cttgtcagaa gcgttataaa ctatgacaga ttgattgtgt ctgacaggtg
     7741 cgttcataca ttgcaggagt atgcaacata ccgctatccc tcggaagatg agaggctcaa
     7801 atcgacagtg caggcggatt taccaataaa gctaaacgat gactgtatgg attcatcaag
     7861 atatgccctg tttaagcact tgacgacata caataatttc ggagcaggcc tgcgggctta
     7921 aacaaaagca acaaatagtg ggaaggcctg tggccctaaa caaacacttt aatttagaat
     7981 agtcagccga gatggggtag ccttataaaa atgttgacga attttgatac acgggaaatt
     8041 ataaaaaaac taaaacaaga ctccacagaa acaaagcgtt ttgtggatta taaaagatac
     8101 agagaactgt accggtcgga atttgcggca ccttttgcaa gcgtgcttat gaaaataaga
     8161 aaacgctacc ccttgcagga tacaaccgct caaagcctcg tggaaattaa cctctttaaa
     8221 gctttgacag acttttttaa attcctcaca acaaacaacg actttgaaat tgttacagat
     8281 aaacaggaga tatgggacaa aatttccgaa gaaaacaatt ttatctctgt tttaaaagag
     8341 gtctgtatcg acaactcaag gtttggcaac ggactgttta aacttgcgtt tgttgatgat
     8401 aaggtgaaaa ttttttcagt ctgccccgat tgctggtttc ctgtttttaa taacggaaat
     8461 ctgaacgact tagccggtca tatccttatc tatgacatag aaaaagacgc aaaagcttac
     8521 aaacacattg aaaaaatcca caaaggctat attgaaaacg aagtgtggat ggtttcaaac
     8581 ggtgaattgt cagcgcaggt ggaaaatgtt cgggactttg gacttgttga gattgatgat
     8641 ttctcggaca aatgggatga ctttgtcctg ttccctgtca aaaacacgtc agaaagcgac
     8701 tgttattatg gcgaaagtga ttataagagc tgcgaaagca ttgtggaaga gataatgctc
     8761 acagtgagcc agaactcaaa aatcatcaac cgccacgcaa acccgaaact tgcaggaagc
     8821 cttgaaaaca cgcagcttaa ccctgttacc ggtgaaagat attttcccaa cagcgatttt
     8881 gtaaaaatcg gctctgacgg gcaaaagcca gagtatataa cggctgattt gcaatcggaa
     8941 gcgataaaag cacatataaa cacgcttatg cagtttttct atattctgac aaaaacccct
     9001 ccgcaggctt acggagtgga tttgtcgggt aatatgtccg gtgagagcct gcaaaaaatc
     9061 tttatgtctg ctgttgcaaa ggttgaggac atcagggcgg tttctcttaa taacgcaatc
     9121 aaaaagcttg taaaatgcgc acttgcattt tcaggagcaa aagatgcaga cgtgtctgtt
     9181 aactggggaa atgcgataaa gcttgattat acggaagtgg tcaaaacctg caacgacaga
     9241 gtacttgctg gcactcaaag caagctgtca gcgataaagc agatggataa agctacagac
     9301 gaacaggcag aagaagaatt aaaacagatt caagaagaac aaaaagcaga tgcagctgtg
     9361 ccgattgaag acgtaatgat tgatgactaa tgaaatacgc aaaattcagt taaaacaaaa
     9421 aaagtcgttg ctaaagattt ataaaaaacg tcttgaagaa ataaaaaaat caatattaga
     9481 acttgcaacc tccggcggca atacactcaa gcttgctatt gagaagaaaa aactggaaaa
     9541 acttatccaa aaactcgaac aggaatttaa ggaattttca gacgaagcga ttgaagaaag
     9601 ttacagacag ggagcgcaag accagaaaaa aagaatcagc gcactcggca ttgctgttat
     9661 agctctggct tctatacaga ttgcaagtat tgaaaatatt tattattctc accttttgag
     9721 aataacaaaa gaaatagctg cgaaagtaaa gtcttatgtt cgcacggatt tttcagacaa
     9781 acataaggtt gtgcaggctt taaataatct ttcacaaacc ggtattcttt caagtgaggt
     9841 tgatactgag cgctggcaat cgttgatgaa acgattggag caaaatttta agaacaaaga
     9901 tatttttaca atcccttatt ttgataaaaa cggaaatgtt gtaagacgtg taaaagcctc
     9961 cacatatgcc gaaatgctgg ctcgcacact gtgcgcacaa actttcagaa aagctgcaaa
    10021 agacagcata cttgagcagt ttgaaaatga gggagatctt gtagaaattt tgggagaatc
    10081 agtatatcct gacagccctt gcatacctta tcaagggaag gtgttgagcc ttacaggcag
    10141 aacaaaaggt tatacaacag taaaagaagc agaaacaaac ggattattcc atccgaattg
    10201 tattcatagt tttgctgtaa cagaaaaagt aattgatgca tattcacaaa aggatatcag
    10261 tttaaaagca taattatcag aaaggagttc taatgtcagg tacagaggaa caaaacttaa
    10321 acattcagcc tggtgctgaa caggcaggaa gtcagtcagg cactgacaac aatgcacaaa
    10381 tagaatcttt gaaagagcag atttcagaac tgcgaaaaga ggcggcaaaa taccgcacaa
    10441 gcgcaaaagg caaagaaact gtcgaagaac agttaaagat tctgcaagag gaatttgcaa
    10501 aaacaaagaa agaaaatc
//
LOCUS       DABS01000073            6228 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_10792, whole genome shotgun sequence.
ACCESSION   DABS01000073 DABS01000000
VERSION     DABS01000073.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6228)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6228)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6228
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..362)
                     /locus_tag="CPT85_02840"
     CDS             complement(<1..362)
                     /locus_tag="CPT85_02840"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24940.1"
                     /translation="MSIYGLGGYYPMYNFHGGIQAPAYKEDIYSKKPTHLKTPNIETL
                     DISKTSKEKTDSAVKVGAAIVLTALAAYGLYKGKKYFKDISLKGTQKPAAPVTKAPET
                     PVAPKVQTTKTQVEPPKP"
     gene            complement(436..906)
                     /locus_tag="CPT85_02845"
     CDS             complement(436..906)
                     /locus_tag="CPT85_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004817087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="DAB24941.1"
                     /translation="MNIKIIAVGKLKEKYTKDAIEEFKKRLNAYCSLTLTEIPAQEIK
                     DENLASKYMEAEGEKILTAIKPDSYVITLEINGKMLSSEDFSQKIKDLANEGHNEIVF
                     VIGGANGLAPRVSARANFKLSFSKMTFTHQLIRIFLYEQIYRAYKIIHNENYHR"
     gene            complement(922..2391)
                     /locus_tag="CPT85_02850"
     CDS             complement(922..2391)
                     /locus_tag="CPT85_02850"
                     /inference="COORDINATES: protein motif:HMM:TIGR01479"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="DAB24942.1"
                     /translation="MAVSNIYAVILAGGSGSRLWPLSRELHPKQLMKIEDDYTLFQSA
                     FIRLVNCVDDKNILSITNVKLESQVKAQLKEMQEKFCRKSSYRVITEPEGKNTAPAIA
                     LAIKYIEKLQQDKAVNQENIEDAIIVAVPSDNLITDNEKYCKSVSEGIKLAKEGYIVT
                     FGVKPDRADVGLGYIRAKNNRKIRSIAADGLKVESFIEKPDLETAQEFVESDKYFWNS
                     GMFVFKASVMMAELKKYERDIYNIIKDAPISSQTPTIPYQDFKDMPDISIDYAVMENS
                     KKLALIPLETDWKDVGSWEAVYDVSEKDENNNYIMGNVLDLESKDSLVYSTSKLITTI
                     GLKDTVVVETEDAVLVCDRSRAQDVKKIVNHLKEIHDTTQYTHKTVYRPWGYYQVLND
                     GKGFLTKCIYVNPGAKLSVQMHHHRSEHWVVVEGKALVLKGEEFIELNCGDSIDLAVE
                     EVHSLQNPYDEPVKVLEVQQGDILDENDIVRLEDMYGRV"
     assembly_gap    2568..2592
                     /estimated_length=25
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<2593..3035)
                     /locus_tag="CPT85_02855"
     CDS             complement(<2593..3035)
                     /locus_tag="CPT85_02855"
                     /inference="COORDINATES: protein motif:HMM:PF09335.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="DAB24943.1"
                     /translation="MLDMILGHLISFIEHVITAMGPLGISLLMAIESCNIPLPSEAIL
                     PFAGYMVSKGIFNFHVAAWAGAFGCVIGSIPSYYIGYFGGRKFVEKYGKYFLVSKKDL
                     EDADKWVEKYGDWAFFICRMLPVIRTFISLPAGILKAKKRFFFTFT"
     gene            3304..>4843
                     /locus_tag="CPT85_02860"
     CDS             3304..>4843
                     /locus_tag="CPT85_02860"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24944.1"
                     /translation="MSEVERIVGENRLVRTKTTTKSESKVIQDSTETWETNKKGSGYK
                     KVQIKLNGETQTPTDNGLSTGAKTPEQEANLAKLAAAREFLKTDEGAKLAQNMLDQQN
                     GISKGQKKWLEKQGVDADAFVQEWNRANPQSANNKLHNAQVSAQQKEELGTLANTHLG
                     VGENREGSPEADRKLPDKRTFFQKLFKTKDKQKVKADAQHGFDTATKVNMHSSTAERK
                     GDLEHTVADDMSRAADKYLESYEVGHDGKKRKTFKEIDENGNVVKTKVRYNKDGSVKK
                     IVTKGDSDGKLVVKQAKDGDITVKGNLQSDFVYEKNPDVREIHTDRYKEVGTIQTITT
                     DNDYQQTIIEREKCPEPPAPPAKEPIQGGLISDFVNDQNPNGMGSVQGSTIRAEFKSH
                     GASEMADSYCSFTNDNAPAQAKTMWKKNPGQMANIYNGKHLAESLINDAENKKLDEES
                     LNSFITALRAQGRNDALSGVKQAILDHNENVTPSGGFKEGTRTVNQKVTISGMAVDWL
                     MKSPE"
     assembly_gap    4844..4903
                     /estimated_length=60
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4928..5679)
                     /gene="tpiA"
                     /locus_tag="CPT85_02865"
                     /pseudo
     CDS             complement(4928..5679)
                     /gene="tpiA"
                     /locus_tag="CPT85_02865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012636513.1"
                     /note="Reversibly isomerizes the ketone sugar
                     dihydroxyacetone phosphate to the aldehyde sugar
                     glyceraldehyde-3-phosphate; frameshifted; too many
                     ambiguous residues; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
     assembly_gap    5080..5148
                     /estimated_length=69
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5785..6210)
                     /locus_tag="CPT85_02870"
     CDS             complement(5785..6210)
                     /locus_tag="CPT85_02870"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24945.1"
                     /translation="MAILKLSPAGFQANYTVKQQTVSKTHAAQTSFGEGRYEEVFISP
                     SHAIRAIVYNPNYPNRRILGYKYLESNNSDLLIKYNKGKFELEGTREITEGYDYFGRK
                     VSHQRVTDQSYLKKIHDLCKEKASKYYFTSKKDVSLDNF"
BASE COUNT         1729 a         1217 c         1228 g         1900 t
ORIGIN      
        1 tgtggttttg ggggctctac ctgagttttt gttgtttgca ctttgggtgc aacaggtgtc
       61 tcgggtgctt ttgttacagg tgcagcaggt ttttgcgtac cttttaaaga aatatcttta
      121 aaatatttct tgcccttgta aagtccgtaa gcggctaaag ctgtcaacac aatggctgca
      181 cctactttta cagctgaatc agttttttct ttagaggttt tagaaatatc cagagtttca
      241 atatttggag tctttagatg cgtcggcttt tttgaataga tgtcttcttt gtaagcaggc
      301 gcttgaattc cgccatgaaa attgtacatt ggataataac cgcctaatcc gtaaatgctc
      361 atgtataatc ctttattttt actaacctaa cctgtattta tataaaaaca tttgggctgt
      421 aaaaattgcc tgcatttacc tgtggtagtt ttcgttatgg attattttgt aagctcgata
      481 aatctgttcg taaagaaaaa tgcgtatgag ctggtgtgtg aaagtcattt ttgaaaaact
      541 gagcttgaaa tttgcacgtg cactcacacg gggagcaagt ccgtttgcgc ctcctataac
      601 aaagactatt tcgttgtggc cttcgtttgc aaggtctttt atcttttgcg agaagtcttc
      661 ggacgagagc attttgccgt tgatttccag cgtgattaca taagagtcgg gctttattgc
      721 ggtaaggatt ttttcacctt ccgcttccat gtattttgag gcaaggttct cgtcttttat
      781 ttcctgtgcg gggatttctg ttaaagtcag gctgcaatat gcattgagtc gttttttaaa
      841 ctcttcaatt gcgtcttttg tgtatttttc ctttaatttt ccaacagcta taatttttat
      901 gttcataggt ctgctgctat gctaaaccct gccgtacatg tcttcgagac ggacaatatc
      961 gttttcgtca aggatgtcgc cttgctgtac ttcgagcact tttacaggct cgtcataagg
     1021 gttttgaagc gaatgtactt cttccacggc gaggtcaatg ctgtcgccgc agttgagttc
     1081 aataaactct tcacctttca acacaagtgc tttgccttct acaacaaccc agtgttcgct
     1141 tctgtggtgg tgcatttgaa cactcaattt tgcgccgggg ttaacgtaga tgcattttgt
     1201 taagaaccct ttgccatcgt tgagcacctg atagtagccc catggtctgt acacggtttt
     1261 gtgcgtgtac tgggttgtgt cgtggatttc ttttaaatgg ttaactattt ttttaacatc
     1321 ctgtgctctg cttctgtcgc atacaagcac tgcgtcttct gtttctacaa ccacggtgtc
     1381 tttcaggccg atggttgtaa tgagcttgga tgtggaataa acaagagaat ccttgctttc
     1441 aaggtcaagt acgttaccca tgatgtagtt gttgttttca tctttttcgg aaacatcgta
     1501 cactgcttcc cacgaaccta cgtctttcca gtctgtttcc agcggaatga gtgcaagctt
     1561 tttggagttt tccattacag catagtctat ggagatatca ggcatgtctt taaaatcctg
     1621 ataaggaata gtcggtgttt gtgacgaaat cggtgcatct ttaataatat tgtagatatc
     1681 tctttcgtat tttttgagct ctgccatcat gacagaagct ttgaacacaa acattccgct
     1741 gttccagaag tatttgtcgg attccacaaa ctcctgcgct gtttcaaggt cgggtttttc
     1801 aataaaagat tctaccttga gcccgtcagc tgcaatgctt cttatctttc tgttgttttt
     1861 tgcacgtatg taaccaaggc ccacgtcagc tctgtcgggt tttacgccaa aggtaacaat
     1921 gtagccttct tttgcaagtt ttatgccttc tgatacggat ttgcagtatt tttcattatc
     1981 tgtgataagg ttgtctgaag gcactgctac aataattgcg tcttcaatat tttcttgatt
     2041 tactgctttg tcctgttgga gtttttcaat atattttatt gcaagggcaa tcgcgggggc
     2101 cgtgttttta ccttctggct ctgtgattac acggtagctt gatttgcggc agaatttttc
     2161 ctgcatttct ttgagctgtg cttttacttg gctttcgagt tttacgtttg ttatgctcaa
     2221 aatatttttg tcatctacgc aattgaccag ccttatgaat gctgattgaa acagcgtgta
     2281 atcgtcttcg attttcataa gctgttttgg atgaagttct ctgctcaagg gccatagcct
     2341 gctgcctgaa cctcctgcca gaattactgc gtaaatatta ctcactgcca taaattactc
     2401 cttgaatata gtcaattata tatattatta attaatcgtt caaatgttta aagtgtttgt
     2461 aaagataagc aacgccgagt acaaaacatg ctgccacaat tgcaatatcg aatttgtgcc
     2521 agatatgctt gaaagcttcc atattctggc ccatttttac ccctacgnnn nnnnnnnnnn
     2581 nnnnnnnnnn nngtaaaggt aaaaaagaat cttttctttg ctttcaaaat accggccggc
     2641 aaagatataa aagttcttat aaccggtagc attctgcaaa tgaaaaatgc ccagtcaccg
     2701 tatttttcta cccatttgtc agcatcttca aggtcttttt tgctgacgag gaaatatttt
     2761 ccgtattttt ccacaaactt tctgccacca aagtagccta tgtaatacga aggaatcgag
     2821 cctattacac agccgaaagc acctgcccac gctgcaacgt ggaagttgaa aatccctttg
     2881 gaaaccatat accctgcaaa cggcaaaata gcttcactcg gcaaaggaat attgcaagat
     2941 tctattgcca ttaaaaggct tatgcccaaa ggccccatcg ctgtgattac gtgctcgata
     3001 aagcttatca aatgccccaa aatcatatct aacataaaaa attctatccc tgtttattct
     3061 tattcctcct ttattttatc aaaaacaaac tatttgaatt gttaagcaat atgaggaaat
     3121 gtaaaggtga ctttgttgac cctgaaaacc agtctatgac accatcctag atggtatggt
     3181 atggggaggg gggattttgc aaatttttcg gctaatcctg tttataaagg ctttttaatg
     3241 ggttttataa acatgtgtga aatgttaagc acattcaatt tacaaaacaa ggagtgccga
     3301 aatatgtcag aagtagaaag aatcgtaggt gaaaacagac ttgtacgtac aaaaacaact
     3361 acaaagtctg aatcaaaggt tatccaagac tctacagaaa cctgggagac aaacaaaaaa
     3421 ggctcgggtt acaaaaaagt acagataaaa ctcaacggcg aaactcaaac acctactgat
     3481 aacggacttt ctacaggtgc aaaaacgccc gaacaggagg caaatcttgc aaaacttgca
     3541 gctgctcgtg aatttttaaa aaccgatgaa ggtgcaaaac tcgctcagaa tatgcttgat
     3601 caacaaaacg gaatttccaa aggccagaaa aaatggctcg aaaaacaggg tgtggacgca
     3661 gacgcatttg tccaggaatg gaacagggca aatcctcaat ccgcaaacaa caagctgcac
     3721 aatgcacagg tttccgcaca gcaaaaagaa gagttgggca cacttgccaa cactcatctt
     3781 ggcgtaggcg aaaacagaga aggaagcccg gaagctgaca gaaaacttcc tgacaaaagg
     3841 acttttttcc aaaaactttt caaaaccaaa gacaaacaaa aagtaaaagc cgatgcacag
     3901 cacggttttg acacagcgac aaaggttaat atgcactcct caacagcaga gcgcaaaggc
     3961 gaccttgagc acaccgtggc tgatgatatg tcacgtgcgg cagacaaata tcttgaatct
     4021 tacgaagtcg gtcatgacgg gaaaaagcgt aaaactttta aggagattga tgaaaacgga
     4081 aatgttgtga aaacaaaagt aagatacaac aaagacggtt ctgtaaaaaa aattgtcacc
     4141 aaaggcgatt cggatggaaa acttgttgta aaacaggcaa aagacggtga catcacagtc
     4201 aaaggcaatt tgcagtctga ttttgtctat gaaaagaatc ctgatgttag agaaattcac
     4261 acagacaggt acaaagaggt cggcactatc cagacaatca cgacagacaa tgattatcag
     4321 cagacaatta tagaaagaga aaaatgtccc gagcctcctg cgcctcctgc aaaagaaccg
     4381 atacaaggcg gtttgatatc agattttgtc aatgaccaga atccaaacgg aatgggttct
     4441 gtacagggtt ctacaatcag agccgagttc aaatctcacg gcgcaagcga aatggcagat
     4501 tcatactgct ctttcaccaa cgacaatgct cctgctcagg caaagactat gtggaagaaa
     4561 aatcccggtc aaatggccaa catatacaac ggaaaacacc ttgcagagtc tcttataaac
     4621 gatgctgaaa acaaaaagct tgatgaggag tctttaaaca gctttattac agcactgcgc
     4681 gctcagggcc gaaatgatgc attaagcgga gtaaaacagg ctatccttga tcataatgaa
     4741 aacgttactc cttcaggcgg gttcaaagaa ggtacacgaa cggtaaatca aaaagtcacg
     4801 atttcaggca tggctgttga ctggctgatg aaaagccctg agannnnnnn nnnnnnnnnn
     4861 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnggctttt tagttttaaa
     4921 aattttatta catagcgcct ttaactattt tagcaaagct gtcagctttc aaacttgcac
     4981 cgccaaccaa tgcgccgtcg atgtcagatt gagccatttg ctcttcgata gtttcaggtt
     5041 taacgcttcc gccgtaaagg attctgatag catcagaggn nnnnnnnnnn nnnnnnnnnn
     5101 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnncc agattggttc
     5161 gtaagcgata attgatttag caacttcttc aggtgtcaaa ccttctaatg ccgctttgat
     5221 ttgtgaagcg atgtgagaat ctgttacgcc tgattctctt tgttcaagag attcgccgca
     5281 gcagatgata ggtacaaggc cttctgaaag gattttttta gctttttggt taaccatttc
     5341 atcagtttcg ccaaagtatt gtcttctttc ggagtgaccg atgataatgt attcgcagcc
     5401 tgcgtcttta gccatttcaa cagaaacttc gcctgtgaaa gcgccttgtg tttcaaagta
     5461 gcagttctgg caagcaagtc ttactttgcc gcagccgcag tctgtcatag ctttatttac
     5521 agcatataaa gaagtgaaaa caggagcaac aacaacttcc ggcattgctg ctttgtctaa
     5581 atcttttaat tctttcatca aatcgttaac taattgagca gattctgcct gcaatttgtg
     5641 cattttccag ttacctgcaa ttacgggtct tcttgacata atttgtctcc tcttgtttgt
     5701 acaatttact tttgaatcgt agttaaaaca aaaggatttt tcaagaaaga tttgtgacaa
     5761 gaaagatttg tgaattttta gatgttaaaa attgtcaagg cttacatctt tttttgatgt
     5821 aaaataatac ttcgaagctt tttctttaca taaatcatgt atttttttaa gatagctttg
     5881 gtctgttacc cgctgatggc tgacttttct tccaaaataa tcatagcctt ctgttatttc
     5941 tcttgtacct tcaagttcga attttccttt gttatacttg ataagcaaat cactgttgtt
     6001 tgattcaaga tacttatagc ccaatattct gcgatttgga taatttggat tataaacaat
     6061 tgctcttata gcgtggcttg gtgagataaa tacttcttcg tagcgacctt cgccaaaaga
     6121 ggtttgtgct gcgtgtgttt ttgagacagt ctgctgtttg acagtgtaat tagcctgaaa
     6181 tccggccggt gatagtttta agatagccat ttgaattcct ttccctct
//
LOCUS       DABS01000074            3733 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_2756, whole genome shotgun sequence.
ACCESSION   DABS01000074 DABS01000000
VERSION     DABS01000074.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3733)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3733)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3733
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..553)
                     /locus_tag="CPT85_02875"
     CDS             complement(<1..553)
                     /locus_tag="CPT85_02875"
                     /inference="COORDINATES: protein motif:HMM:PF13704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24885.1"
                     /translation="MNRLIAISIVKNEENNYLADWLRNLRKFVDYHIFLDDASDDKTP
                     DIIQNFINSGYKGEIHRRKESLFAENEPALRSELWQYTRKFAENGDWILIVDADEFYD
                     KRLLSFKQKIPYLNKKHYECVKVSCRDMWTKNKYRCDGYWSPKNAAVRLIAFEDVAFG
                     NNGNNLHLPAYPMSINIRNKYKMY"
     gene            complement(546..>1709)
                     /locus_tag="CPT85_02880"
     CDS             complement(546..>1709)
                     /locus_tag="CPT85_02880"
                     /inference="COORDINATES: protein motif:HMM:PF00534.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24886.1"
                     /translation="FPFLFVRNIYWENILLNRFKNFANKTKNNVYIFQYQFLDMQGEN
                     CFNGGAERYVVDLANILVNRGYNPILVQASSKNNKFWIKQYGSLTVVGLYKHCYFDIL
                     SNLPKPVFSIYSGLFKWGKKKLNPNIIISHGVTWDSPDVNFSYKDLVSHFLSNVDYFV
                     SVDTNTISQMRTFFKNQLNNRPVNFIYVPNYVDKKVFCPKKKSHDKIKILFPRRCSVE
                     RGFWLVSDVLPEILEQYPFVEFEFVGFIHDEDIKAKLGALIDLYPERVKHLLLEPEHM
                     PDCYKNADITLIPTIYSEGTSLSCLEAMACGNFVIATNIGGLTNLIINNYNGILINPD
                     KNELKQALKNALEDKSFFECVCNNAQSVSDTFEKRVWIQQWNDIITSIGDKCE"
     assembly_gap    1710..1729
                     /estimated_length=20
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1741..2922)
                     /locus_tag="CPT85_02885"
     CDS             complement(1741..2922)
                     /locus_tag="CPT85_02885"
                     /inference="COORDINATES: protein motif:HMM:PF13692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24887.1"
                     /translation="MLNNKFFVRKLESFLFAPFKKRNWLYLWHYAKSYRLLYNIISNW
                     PDDNIIVSLSMPFNNALFQRPQHLATELSKCGFLYLYGEQKNVVTYKYSETLIISDFS
                     LINNVCKKLGKKPYLLLTTTSPYNLKQVLKLKKLGYKVIYEFIDEMSDEIHDSTQGKI
                     ILNNLNLIEPVLCIATSKHLLNILKDKYPQGRFLLNPNAVNLQDFCNNSSEIPVDMQN
                     VIKDNKPVVGYYGAIATWLNYELINTLTKNRPDYNFVFIGSDFKGLHLIEKLPNVFYL
                     GEKKYKELIRYSSLFDCAIIPFKDGEIAKATSPVKLFEYMCAQIPVVCTKDMQECYGY
                     DGVFIAKDNTDFINCVDSAIAISKDENIKIKLLEYAQQNIWAQRAYDIKETLFNELSA
                     N"
     gene            3115..3447
                     /locus_tag="CPT85_02890"
     CDS             3115..3447
                     /locus_tag="CPT85_02890"
                     /inference="COORDINATES: protein motif:HMM:PF12844.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24888.1"
                     /translation="MDLRAKIGYKLKRLRLEADISQEKLAEYLGVHIQAIGKVETGKI
                     FISEKVLIKACKFFDVKPRYFFDFDDIKLRQSDTERISEITEKLQHSKPIFIKQIHKI
                     VNALYEEN"
     gene            complement(3476..3549)
                     /locus_tag="CPT85_02895"
     tRNA            complement(3476..3549)
                     /locus_tag="CPT85_02895"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(3515..3517),aa:Gln,seq:ctg)
     gene            complement(3654..3728)
                     /locus_tag="CPT85_02900"
     tRNA            complement(3654..3728)
                     /locus_tag="CPT85_02900"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(3694..3696),aa:Asn,seq:gtt)
BASE COUNT         1343 a          625 c          459 g         1286 t
ORIGIN      
        1 gatacatttt gtatttattc cgtatattta tagacatagg ataagcaggt aagtgtaaat
       61 tattaccatt attgccaaaa gcaacatctt caaaagcaat aagtcttaca gccgcatttt
      121 taggcgacca atatccgtca catcgatatt tattttttgt ccacatatct cgacaagaaa
      181 cttttacaca ttcataatgc tttttattta aatatggaat tttttgttta aaagataaaa
      241 gacgtttatc ataaaattca tcagcatcaa ctattaaaat ccaatctccg ttttctgcaa
      301 attttcttgt atactgccat aactcgctgc gtaaagcagg ttcattttct gcaaacaatg
      361 attccttgcg tctatgaatc tcacctttat aaccactatt tataaaattt tgaattatat
      421 caggcgtttt atcatcagat gcatcatcca aaaatatatg ataatcgaca aattttctta
      481 aatttcttaa ccagtctgct aaataattat tttcttcatt tttaactatt gatatagcta
      541 ttaatctatt cacatttatc tcctatcgat gtaataatat cattccattg ttgaatccaa
      601 acccgttttt caaacgtatc agatacactt tgagcattat tacaaacaca ctcaaaaaaa
      661 cttttatctt ccaatgcatt ttttaaagct tgttttaact catttttatc aggatttatc
      721 aatatgccat tgtaattatt aattatcaaa ttagttaaac cgccaatatt agtagcaatt
      781 acaaaattgc cacatgccat tgcctccaga caagacaaag atgttccttc tgaataaata
      841 gttggaatca atgtaatatc agcattttta taacaatccg gcatatgctc tggctctaac
      901 aataaatgct ttactctttc cggatataaa tcaatcaaag caccaagttt agctttaata
      961 tcttcatcat gtatgaaccc gacaaattca aattctacaa aagggtattg ttcaagtatt
     1021 tctggtaaaa catcactcac cagccaaaag cctctttcta cagaacacct tcttggaaaa
     1081 aggattttta ttttatcatg tgatttcttt ttaggacaaa agaccttttt atcaacataa
     1141 tttggtacat aaataaaatt tacaggcctg ttatttaatt gatttttgaa aaacgtcctc
     1201 atttgagaaa ttgtattagt atcaaccgaa acaaagtaat caacgttaga caaaaaatga
     1261 gaaactaaat ctttgtaaga aaaatttaca tcaggagaat cccacgttac accatgcgaa
     1321 attataatat tggggttcaa tttcttcttt ccccatttaa aaagacctga atatatagaa
     1381 aatacaggtt ttggaagatt gcttaatata tcaaaatagc aatgtttata taatccaaca
     1441 acagtgagtg agccatattg ttttatccaa aatttattat tttttgaaga agcttgcact
     1501 aaaataggat tataacctct gtttactaat atattagcaa gatctacaac atagcgttca
     1561 gctcctccat taaaacaatt ttcaccttgc atatctaaaa attggtattg aaaaatatac
     1621 acattatttt tagttttgtt tgcaaaattt ttaaatctat ttagcaaaat attttcccaa
     1681 taaatatttc tcacaaacaa aaaaggaaan nnnnnnnnnn nnnnnnnnna aatattactc
     1741 ctaattagca gataattcat taaataatgt ttcttttatg tcataagctc tttgagccca
     1801 gatattttgt tgagcatatt ctaaaagttt aatttttata ttttcgtctt tggaaattgc
     1861 aatagcagag tcaacgcaat ttatgaaatc agtgttatct ttagcaataa aaacaccatc
     1921 ataaccataa cactcttgca tatcctttgt acaaacaact ggtatttgtg cacacatata
     1981 ctcaaaaagt tttaccggag atgtagcttt tgcaatttcg ccatccttga aagggattat
     2041 tgcacagtca aacaatgaag aatatctaat aagctcttta tatttcttct cacccaaata
     2101 aaaaacatta ggaagctttt caatcagatg caaaccttta aagtcacttc ctataaacac
     2161 aaaattataa tcaggtctat tttttgttaa tgtatttatt aattcatagt tgagccaagt
     2221 tgcaatagct ccgtaataac ctactacagg tttattatct tttattacat tttgcatatc
     2281 aacaggaatt tctgatgaat tattacaaaa atcctgcaaa tttacagcat ttggatttag
     2341 caaaaacctt ccttgtgggt atttatcttt taagatattt aataaatgtt ttgatgtagc
     2401 tatacacaac acaggctcta ttaaatttag attgtttaaa ataatcttgc cttgtgtcga
     2461 atcatgtatt tcatcactca tttcatcaat aaattcataa ataactttat atccaagttt
     2521 ttttaacttt aaaacttgtt tcaagttata gggagaagtt gttgtaagaa gcaaataagg
     2581 ctttttccct aactttttac atacattatt aataaggcta aaatctgaaa taattaaagt
     2641 ttcactatat ttataagtta caacattttt ttgctcgcca tacaaataca aaaaaccaca
     2701 tttactaagc tctgttgcaa gatgctgtgg tctttgaaac aaagcattgt taaaaggcat
     2761 agacaaactt actattatat tatcatcagg ccaattgctt ataatattat acaaaagcct
     2821 ataactttta gcataatgcc acaagtaaag ccaattcctt tttttaaaag gtgcaaataa
     2881 aaaagattct aattttctta caaaaaattt attatttaac atattcaaat tctactcata
     2941 aaaaagataa caataattac ttataaaatc aatacttaat ttctattcta ttttgtaacc
     3001 tcaattttta tttgcaacca tataggtatc ttataacata tttaatgaaa tatttcaata
     3061 ttttagttaa taatttcatt ggcttttaaa gaaaatacat attaatctaa aaatatggac
     3121 ctaagagcca aaatcgggta taaacttaaa cgcttacggc tggaagctga catctcgcaa
     3181 gaaaagcttg cagaatatct tggtgtgcat atacaggcca ttggcaaagt agaaacaggg
     3241 aaaattttta ttagtgagaa agtgttgata aaagcatgca aattttttga tgtaaaaccg
     3301 cgctactttt ttgactttga tgatataaag ctccgccaat ctgatacaga gagaataagt
     3361 gaaataacag aaaagttaca acactcaaaa ccaatattta taaaacaaat acataaaata
     3421 gttaacgcat tatatgaaga aaactaaaaa agacctcaaa agaggtcttt tttaatggct
     3481 ccgggacatg gattcgaacc acgattagat gatccagagt cacctgtcct gccgttagac
     3541 gatcccggaa tatcgtttaa caacaatttt attttagcac ttaagatacc aaggtcaata
     3601 attttttata aaaaatcaca taaaaaaaga cgcttaaagc gtctttttta aaatggctcc
     3661 tcgggtggga ctcgaaccta caacccttcg gttaacagcc gaatgctcta ccattgagct
     3721 atcgaggatt att
//
LOCUS       DABS01000075           10488 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_21387, whole genome shotgun sequence.
ACCESSION   DABS01000075 DABS01000000
VERSION     DABS01000075.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10488)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10488)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10488
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..443)
                     /locus_tag="CPT85_02905"
     CDS             complement(<1..443)
                     /locus_tag="CPT85_02905"
                     /inference="COORDINATES: protein motif:HMM:PF12698.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24866.1"
                     /translation="MIRDFLRRVFALVKKEFITIWKDPKSRGIIIALPLLQLFIFANA
                     ITMEVKNIDVAVIDRDNSVESRELLSRFENSPRFRRFYILDNEKDFKEKIDTQRVQIG
                     IYINNDFSSAVKSNRPVDVLIVADGRQTNSASIASGYASQIIASY"
     gene            complement(440..1549)
                     /locus_tag="CPT85_02910"
     CDS             complement(440..1549)
                     /locus_tag="CPT85_02910"
                     /inference="COORDINATES: protein motif:HMM:PF12679.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24867.1"
                     /translation="MKILNALLKKEFFQIIRDPSSIIIAFVLPLISILIYMYGINLDT
                     VKVTIGIKNDDANPEVATLVKSYGHSKYVRSKVYDNMQELTQGIVRSKIKGAVVIPND
                     FSTKLSRGQSADLFIITDGSEVNTANYVQNYAMQIANQWLQTSRYSQNAQKSVINPQI
                     RTWYNQDLNSHYFILPGSLAITMTLIGILLTALVVAREWERGTMEAILSTRVRKIDIV
                     LGKYIPYLILGMCSMAFNVFLCTAVFKVPFRGNYFVLFGVCSLFLFTSSGIGLLISSK
                     LKNQFLASQVSLGIGFLPALLLSGLMFPINSMPLIFQHLTRILPPRYFITFIESEFMA
                     GTVWEIVIVNSIFLTILGLVLFAAVYANTDMRLNK"
     gene            complement(1546..3030)
                     /locus_tag="CPT85_02915"
     CDS             complement(1546..3030)
                     /locus_tag="CPT85_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007359512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter ATP-binding protein"
                     /protein_id="DAB24868.1"
                     /translation="MNTVQIKNLTKTFDSTLAIDNLSLDIEKGKITGLIGADGAGKTT
                     LIRLVIGLLVPDNGEVSVLGLNPFTQKEQLNKLIGYMPQKFGLYEDLTILENLRLYAD
                     LKNQPYDFDKLLEFTGLKPFLNRLAGALSGGMKQKLGLACALMGTPEFLVLDEPSVGV
                     DPISRRDLMKMVKDLISPQTTVLWSTAYLDEAHSFDTAIVLDKGKVIYNGSPHSLAAT
                     APEFEDKVIELMGGYKKEESLIAKNYTPFQSSLTCTVEADNLEKKYGDFYAVKNNSFC
                     INKGEIFGLLGPNGAGKSTSFKMMCGLTKPSGGTARIMGVDILKNPGKARSFLGYMAQ
                     KFSLYGTLTVRQNLEFFAAAYGISFLNRKKRVDEIIEVFGFKDIENQKSEDLPLGFKQ
                     RLSMACALIHNPPVLFLDEPTSGVDVITRRDFWNHITSLAKKGVTILVTTHFMDEAEY
                     CDRISLFYKGETIAVGTPQELKDKAGADDMENTFINLIKESEKS"
     gene            complement(3032..3874)
                     /locus_tag="CPT85_02920"
     CDS             complement(3032..3874)
                     /locus_tag="CPT85_02920"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter periplasmic adaptor subunit"
                     /protein_id="DAB24869.1"
                     /translation="MKKRAIVAILILLIIAAAVYLLTKKKPNPDELTLYGNIEIRQVD
                     LSFQVPGQISLMLKEEGDSVKKGELVALLDDRDYKSNLEKAAADVLKTSALSKDASSK
                     YARQAPLCADSTVSKQECDTLLNTKNKTKADYDAAVARKTFAKNQLDYTKIYAPDDGT
                     ITVRVQEPGATVNKGQVVYTIAKTKPVWIRAYVNESDLGNIKYGMKARVLTDSKDPKT
                     GQNREYEGRIGYISPVAEFTPKTVESTDLRTDLVYRIRVYVDEIDDFLRQGMPTTIKI
                     NLVK"
     gene            complement(3871..4086)
                     /locus_tag="CPT85_02925"
     CDS             complement(3871..4086)
                     /locus_tag="CPT85_02925"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24870.1"
                     /translation="MKIILXTKEAEASQAKIFENSQKKYNRGVISSSDYLVQYRNLVA
                     SKQQSAQAKTAKIVDYFTLYKAVGGKL"
     gene            complement(4064..5194)
                     /locus_tag="CPT85_02930"
     CDS             complement(4064..5194)
                     /locus_tag="CPT85_02930"
                     /inference="COORDINATES: protein motif:HMM:PF02321.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24871.1"
                     /translation="MIKKFLVTIALLFFSQCALAIDKESLNPAFFERFNDDYLVSYIY
                     KAMENNHNLKKAGYVVEQYRQQARYSLGKELPSLSVSANYLGVHVPRLDNFQLSQNAF
                     ILPFVANYEPDFLLKNRDKTRSAKKAYEAALYDEKAVYLSLLGDVASVYTNILQYDSL
                     ISLQQEAVKSYRGIYDSDLKKFKRGVIDTSQLNLSKQNLDNAVISLQRYSKERDTLLM
                     QLAVLCGLPPECAHTLKRGQLEALNYNSAVPTVILSDIIFSRPDVMRAEKNLEKAKID
                     VRIARKEFLPSFNITGVWIFNTIAPGSFFSWESSLAALLAGATQDIFKGGMKVANLRI
                     QKAKYEELFQEYKQIDLDAVKEVNTALCILKHDVVIENNTXY"
     assembly_gap    4070..4071
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5187..5831)
                     /locus_tag="CPT85_02935"
     CDS             complement(5187..5831)
                     /locus_tag="CPT85_02935"
                     /inference="COORDINATES: protein motif:HMM:PF09209.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24872.1"
                     /translation="MFYNNFMKKKKSENSKQKILSAATKLFAQHGFDGVSVRDICDKA
                     NVNVCMVSYYFGGKKELYQGIIDNLIECQSNYLKTFIDFEKSVKSMSKKEQLDLLFLI
                     LDKFVDFFYKNISSDLIVILLKEQQNKYFVMKSPAIKYFRQLIAAVFDKDESDREIIL
                     KTLFITSQVNSPRILPAFSLRLLGQDDFIQEDIKIIKDNVMFYVKALIKEAGID"
     gene            complement(5882..6517)
                     /locus_tag="CPT85_02940"
     CDS             complement(5882..6517)
                     /locus_tag="CPT85_02940"
                     /inference="COORDINATES: protein motif:HMM:PF00534.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24873.1"
                     /translation="MSDSDEKRIFGSLNKDPDSVMIYNTSRFDISQKGIDLFIKVIKP
                     ILLADEHVQFVICIKGISKNRKYDYINELLKNCESHKLFKGRVVVIDDFVPVYTYMAA
                     SDILVMPSYFEPCGMVQMQAMRYGCIPVVSNTGGLRDTVCEKTGFKTDIPLLDAKYPQ
                     EFLLSALKQALKVYREQPENWNKMVKNCMQNNVGWDNFKIDGICDFYKKLL"
     gene            complement(6478..9585)
                     /locus_tag="CPT85_02945"
     CDS             complement(6478..9585)
                     /locus_tag="CPT85_02945"
                     /inference="COORDINATES: protein motif:HMM:PF08323.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24874.1"
                     /translation="MVNAKYLKLNPKDCLNMSFNQSLDLLKKIVDKKEIEKAFDISKN
                     YPGFLEGQKDTTWSHNAKIMGINPRITKTFWGIVKYAMTFPEECVHIMPLWTPGIDGG
                     FYAPLNFRLNKEFMDNELSAYGYDTPEKQLKLVTNVLHAMGKVVCFDALLHTERWSEL
                     VFLYPQFFEWVKLNKTKSRQYSGYELDFNSIYKEVQICIKTFLQLNGCADNSFLTEKQ
                     ITELFTDGSDVLYLDKILFGNDDNLRLERRKSLINFVRSAGFETIPVTEHAPSRPVVF
                     DKIVQDSQGSHSEFKVENMSSEAKIFGALTPFKLYRIDKDGYPLCDEPQEQVWSFISD
                     IYADFQKEYNFDFMRADMAHNQQSHSHKRNEKIFCNQKEIWRFIKSRINEQKPYFAVL
                     AEAFLNMDYYIDGYQDLQNKDFDIVLGDLNYLFLNHEYIYRLKTRNDNYYNYNFKICS
                     TSFTNDSDRQENTIFYSSVMSCAIRYFTGLFCDSPSYCAIGYELKDFCKKEKEYFSSI
                     YTNYQENAFKWGDNAELFAKISEIRSLYEKITKEIKDARVFWLNSENDRHACWMYVDS
                     KSQKPLYLFVINLDAGEFEQDITIRDFQNCVPRDKKYTFLPLLTLSQNKKKAPKTALK
                     NNTVVLKGVETGEIRAYKIDTKSQISFLKNFKANKLKKQKRQILLIAPECAPYSKAGG
                     MSDINRDFTEALKKKYPDFDLRIIIPIYNARNIVSLNGFEIEDLNIKADYSYGLNKSY
                     ANLYKVKSPDNEVETYAVYSPAFSLMKEPYEGSEYNYGKQYIAYSSCVLALLKILAKK
                     ENFKPEILHLTDWPVGFVTHLLKDSCHKDKFYKNMKTVMTIHNTGYQGKYDTFYAFLN
                     LFEKDFIKETLSACNIQISENTIKNALQDYDDFRLNNKDLCTKLNDYLEERLDSNYFD
                     IDFVTKERFNTLXXLMPGLRIQSLFIRSLLQTQVMPPHCFLKPCTETETKVRVLRVEY
                     AKNGMTRVIVNRLNSHTLYMTQMSVKRKTKLLCKIFLQTIIKAAILTGNFWCLILMKK
                     EYSAA"
     assembly_gap    6804..6805
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(9579..10460)
                     /locus_tag="CPT85_02950"
     CDS             complement(9579..10460)
                     /locus_tag="CPT85_02950"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24875.1"
                     /translation="MKGKYHYIVTKNEPFLNLEHLKGNYRNGYQNFANEAVREVEYFE
                     KLEKNAKKSLGVSKYFVDENRRNFEIAKEEKERIEKAKKYHVWEEGKFDKQSEEADYY
                     YDLNRRRLEESESKKAAYEAQIQRAKERLPKAAAKYKLLKELDDKSGEKEIYLRKNRD
                     NNQEILRTNYQLKVTKSRIESYNAEKDIINAQITHAKINIKNLEETEQHKYDNLYEIN
                     KFRDSIEENKKKLKEKDNTIAYLQTEKIKLETYMQKLKKNQAEINKDFERINPQLDAI
                     MAKIEAFYKENYPDYLW"
BASE COUNT         3128 a         2038 c         1690 g         3628 t
ORIGIN      
        1 ttatacgagg caattatttg agaagcatat ccacttgcta ttgacgcgga atttgtctgc
       61 cttccgtcag caacaatcaa aacatcaacc ggcctgtttg actttacggc ggaagaaaaa
      121 tcgttattta tataaatacc aatttgtact ctctgggtat ctattttctc tttaaaatcc
      181 ttttcgttat ccaggatata aaaacgtctg aaccgaggtg agttttcaaa ccttgataaa
      241 agctcgcgcg attctacaga gttgtctcta tcaatcactg caacatcaat gttttttact
      301 tccattgtaa tggcatttgc aaaaataaaa agctgcaaaa gtggaagcgc gataattatc
      361 cctctgcttt taggatcttt ccagatagtt ataaattctt tttttactaa agcaaataca
      421 cgtcttaaaa aatctcttat catttattaa gcctcatatc agtgtttgca tatactgccg
      481 caaataaaac caacccgagt attgtcaaaa aaattgaatt tactataaca atttcccata
      541 cagtaccggc cataaattca ctttcaataa aagttataaa gtatctggga ggcaaaattc
      601 ttgttaaatg ctggaaaatt aaaggcattg agtttatcgg aaacataagc cctgacaaca
      661 aaagtgcggg caaaaaacca atacctaaag aaacctgact ggcaagaaac tgatttttta
      721 atttggagga aattaaaagc cctatacctg atgaagtgaa taaaaacaaa gaacaaaccc
      781 cgaacaaaac aaaataattg cccctgaaag gaactttgaa aacagctgta caaagaaaaa
      841 cattaaaagc catagagcac attcccagta tcaaataagg aatatattta ccaagaacaa
      901 tatctatttt tcttacgcgt gtgctcaaaa ttgcttccat ggtgcctctt tcccattctc
      961 ttgcaaccac aagagctgta agaagtatac ctataagtgt catggtaata gccagagagc
     1021 ccggcaaaat aaaataatga ctgtttaaat cctgattgta ccaagtacga atctgtggat
     1081 ttatcacaga tttttgtgca ttttgtgaat atctgcttgt ttgaagccat tggttggcaa
     1141 tttgcattgc gtagttttga acataattgg ctgtattgac ctctgaaccg tcagtgataa
     1201 taaacaaatc cgcactttgg ccacgtgaaa gttttgtaga aaaatcgtta ggtattacaa
     1261 ctgcaccttt tatttttgaa cggacaattc cctgcgtgag ctcctgcata ttgtcatata
     1321 cttttgagcg tacatatttg ctgtgtccgt aagattttac cagtgtagcg acttctggat
     1381 ttgcatcatc attttttata ccgattgtga cttttactgt atcaaggttt attccgtaca
     1441 tataaatcaa gatggagatt aaaggaagca caaacgcaat tataatactg cttggatctc
     1501 ttattatttg aaaaaactct tttttcaaca gagcattaag gattttcatg atttttcact
     1561 ctccttaatc aaatttataa aagtattttc catatcatca gcacccgcct tatctttgag
     1621 ttcctgcggc gttccaacag caatagtttc acctttataa aaaaggctta tcctgtcaca
     1681 gtattctgct tcatccataa agtgtgtagt aacaagaatc gtcacgcctt tttttgcaag
     1741 cgatgtaata tggttccaaa aatcacgtct tgtaataaca tcaacgcctg atgtaggctc
     1801 atccaaaaac agcacgggtg gattgtgaat caaagcacac gccatagaaa gtctctgctt
     1861 gaacccgagc ggcaaatctt cggatttttg attttctata tctttaaagc caaatacttc
     1921 aataatttca tcaacacgtt tttttctatt taagaaactt atgccgtaag ctgccgcaaa
     1981 aaattccagg ttttgtctga ctgtcagtgt gccgtataaa gaaaattttt gtgccatata
     2041 tccgagaaaa gaacgtgctt ttccgggatt ttttaatata tctactccca taatccttgc
     2101 tgtgccgccg gaaggttttg taaggccgca catcattttg aaagatgttg atttacccgc
     2161 accgttaggg cccagcagcc caaaaatttc tcctttattt atgcaaaagg aattattttt
     2221 tacagcgtaa aaatcaccgt attttttttc aagattatct gcctcaacag tgcatgttaa
     2281 tgaagactga aaaggtgtat agtttttagc aatcaaagac tcttcttttt tgtatccgcc
     2341 cataagctct atcaccttat cctcaaactc aggtgcagtg gccgcaagtg aatggggaga
     2401 accgttatat attactttac ctttatctag cacaattgct gtgtcaaagc tgtgtgcctc
     2461 gtcaaggtat gcagttgacc aaagtacagt cgtttgcgga ctaatcaggt cttttaccat
     2521 tttcatcagg tcacggcggg aaatcgggtc aacacctacg gaaggttcat caagaacaag
     2581 aaattcagga gtgcccatca aggcacacgc aagacccaat ttttgtttca taccgccgga
     2641 aagcgcacct gccagacggt ttagaaaagg ctttagacct gtaaactcca gcagtttatc
     2701 aaagtcatat ggttgatttt tcaaatcagc atataatcgc aaattttcaa ggatagtcaa
     2761 atcctcataa aggccaaatt tttgaggcat ataaccaatg agtttattca attgctcctt
     2821 ttgagtaaaa ggatttaacc ctaatacact gacctccccg ttatctggaa caagaagtcc
     2881 aattaccaat cttatcaggg tagttttacc tgcaccatct gcacctatga ggccggtaat
     2941 tttgcctttt tctatgtcca gagacaaatt atcaattgca agtgtcgaat caaatgtctt
     3001 ggttaaattt ttgatttgaa ccgtattcaa tttacttcac cagattaatt tttattgtag
     3061 taggcatacc ctgacgaaga aaatcatcta tttcgtcaac atatacacgg attctgtata
     3121 cgaggtccgt cctcaaatca gtagattcaa ctgtttttgg agtaaattcc gcaacaggag
     3181 agatgtatcc gattctgcct tcgtattctc tgttttgacc ggttttaggg tcttttgaat
     3241 cggtaagtac tcttgctttc ataccatatt tgatattacc cagatcagac tcgttaacat
     3301 aagctcttat ccaaacaggt tttgtctttg caattgtata aacaacctgt cctttattaa
     3361 cggttgctcc aggttcttgc actctgactg taatagtacc gtcatcaggt gcatatattt
     3421 ttgtataatc aagctggttt ttggcgaaag ttttccgcgc aacagcagcg tcatagtctg
     3481 cttttgtttt gttttttgta tttaaaagcg tgtcacactc ctgtttcgac acagtactat
     3541 ctgcacacag tggagcctga cgggcatatt tcgaagatgc atctttactc aaagcagaag
     3601 tttttaagac atcagcagcc gctttttcca aatttgattt ataatccctg tcatcaagca
     3661 aagctacaag ttcgcctttt tttacactgt caccttcctc tttaagcatc aaagaaatct
     3721 gtccaggtac ctgaaaactc aagtcaacct gtcgtatttc aatgttaccg tacaaagtta
     3781 gctcatcggg gtttggcttc ttttttgtca gcaaatatac tgctgccgca ataatcagca
     3841 aaatcaatat tgcaacaatg gctctttttt tcataactta cctccgacag ctttgtaaag
     3901 agtaaaataa tctacaattt ttgcggtttt tgcctgtgcg ctctgttgtt ttgacgcaac
     3961 cagattgcgg tattgcacca aataatcaga tgacgatatc actccgcgat tatatttctt
     4021 ttgtgaattt tcaaatattt tggcctgcga agcctctgcc tctttagtan ntagtattat
     4081 tttcaattac aacatcatgt tttaatatac aaagtgcagt attaacttcc tttacagcat
     4141 caaggtcaat ttgtttgtat tcttgaaaaa gttcctcata ttttgctttt tgaatcctca
     4201 agttggcgac tttcattccg cctttaaaaa tatcctgcgt agcccctgca agcaatgctg
     4261 ccagcgaaga ttcccatgag aaaaatgaac ccggcgcaat tgtattaaaa atccatacac
     4321 ccgttatatt aaacgagggc aagaattctt tacgtgcaat tcttacatca atttttgcct
     4381 tttccagatt cttttctgct ctcatcacat cagggcggga aaatataata tcagataata
     4441 taaccgttgg cacagcagag ttgtaattta acgcttcaag ttgtccgcgt tttaaagtgt
     4501 gagcacattc aggaggaagt ccgcataaaa cagccagctg cataagaagg gtatctcttt
     4561 cttttgaata tcgctgcaaa gatattacag cattatcaag attctgcttc gatagattca
     4621 actgcgaagt gtcaatgacc cctcttttaa attttttcaa gtcagaatca taaatgccgc
     4681 gatatgattt aacagcttcc tgctgcaatg atatcaggct gtcatactgc aatatatttg
     4741 tataaacaga agccacatca cccaacaacg ataaataaac tgccttttca tcgtacaaag
     4801 ctgcttcata agctttctta gcacttcttg ttttatctct attttttaac aggaagtcag
     4861 gttcataatt tgcaacaaaa ggtaaaataa aagcattctg gctcagttga aaattgtcaa
     4921 ggcgaggcac atgcacaccc agataatttg cactgacact caatgaaggt aactctttgc
     4981 ccagagaata acgtgcctgc tgcctgtatt gctctacaac ataccctgct tttttgagat
     5041 tgtgattgtt ttccatagcc ttgtatatat aagaaaccag ataatcatca ttgaatcttt
     5101 caaaaaaagc ggggtttaga ctttccttat caatagccaa tgcacattga gaaaaaaaga
     5161 gcagagcaat tgtaaccaaa aactttttaa tcaatgcctg cctccttaat caatgctttt
     5221 acatagaaca ttacattatc ctttatgatt ttaatatctt cttgaataaa atcatcctgc
     5281 cccaacaacc taagcgaaaa tgctggcaaa atacggggag aattaacctg tgaggtaata
     5341 aaaagtgttt ttagtattat ttctctgtca gattcatctt tgtcaaacac agccgcaata
     5401 agctgcctaa aatacttgat agccggtgat ttcataacaa agtatttatt ttgctgttct
     5461 ttcaaaagga ttactatcaa atcagaggaa atattcttgt aaaaaaagtc cacaaattta
     5521 tccagtatca aaaacagtaa atccagttgt tctttttttg acatgctttt tacagatttt
     5581 tcaaaatcaa taaaagtttt tagatagttg ctttggcatt caataagatt gtcaattata
     5641 ccctgatata actctttttt tccgccgaaa taataagaca ccatgcaaac atttacattg
     5701 gctttgtcac atatatcacg gacactcaca ccgtcaaacc cgtgttgcgc aaagagtttt
     5761 gttgctgcgc taaggatttt ttgtttagaa ttttctgatt ttttcttttt cataaagtta
     5821 ttataaaaca aacgtttgat ttaatcaatt gcgcaattaa aaatctttat gatttgtgca
     5881 tttataaaag ttttttataa aagtcacata tgccgtctat tttgaaatta tcccagccaa
     5941 cgttattttg catacagttt tttaccattt tattccagtt ttcaggctgt tcacgataca
     6001 ctttcagggc ctgttttaaa gcagacaaaa gaaactcctg tggatatttt gcatccaata
     6061 acggaatatc tgtcttaaat cctgtttttt cacaaacagt atctcttagc cccccggtat
     6121 ttgaaacaac aggaatacat ccgtatctca ttgcctgcat ctgcaccatt ccgcaaggtt
     6181 caaaatagct gggcataaca aggatatcac tcgctgccat ataggtataa acgggcacaa
     6241 agtcatcgat aacaactact cttcctttaa acagtttatg gctttcacaa tttttaagta
     6301 gttcattaat ataatcatat tttctgtttt ttgatatacc tttgatacat ataacaaact
     6361 gtacatgttc gtctgcaagc aaaataggtt ttatcacctt tataaaaaga tcgatcccct
     6421 tctggcttat atcaaaacgt gatgtattat aaatcatcac ggaatcaggg tctttgttca
     6481 ggctgccgaa tattcttttt tcatcagaat cagacaccaa aaatttcctg tcaggattgc
     6541 tgccttgatt atcgtttgca aaaaaatctt gcacaaaagc tttgtttttc tttttacact
     6601 catttgcgtc atataaagag tatgggaatt taacctgttc acaattactc gggtcatacc
     6661 gtttttcgca tattccacac gtaacacccg cacctttgtt tctgtttctg tacagggttt
     6721 caaaaagcag tgtggaggca taacttgcgt ttgtaataag ctccttataa aaagactctg
     6781 aatccgtaag ccaggcatca gaanntaaag tgtattgaat cgttcttttg tgacaaagtc
     6841 aatgtcaaag taattggagt ccagtctttc ttcaagataa tcattgagtt tcgtacaaag
     6901 atctttatta ttgaggcgaa aatcatcata atcctgcaat gcatttttta ttgtattttc
     6961 tgagatttgg atattgcaag ctgacagcgt ttcttttata aaatcttttt caaaaaggtt
     7021 caaaaaagca tagaaagtat catacttgcc ttgatatcct gtattatgaa ttgtcataac
     7081 agttttcatg tttttgtaga atttgtcttt atggcagctg tcttttagca aatgtgtgac
     7141 aaaaccaacg ggccagtctg taaggtgaag tatttccggt ttaaaatttt ctttttttgc
     7201 aagaattttt aaaagcgcaa gtacacaact actgtaggca atatactgtt taccgtaatt
     7261 atactcagag ccttcgtatg gttctttcat taaagaaaag gcaggagaat acacagcata
     7321 tgtctccact tcgttgtcag gagattttac cttgtacaaa tttgcataac ttttgtttaa
     7381 tccatacgaa taatctgctt ttatattaag gtcttcaatt tcaaaaccat ttaggctgac
     7441 aatgtttcgg gcgttataaa ttggaataat tatcctcaaa tcaaaatcag gatatttttt
     7501 ctttaaagct tctgtaaaat ctctgtttat atcactcatt ccgccggctt tagagtaagg
     7561 tgcacattcc ggagcgatga gcaaaatttg tcttttttgt tttttcaatt tattagcttt
     7621 aaaattttta agaaatgaaa tttgactttt tgtgtcaatt ttataagcac gaatttctcc
     7681 cgtttccact cctttgagca ccacagtatt gttttttaac gcagtttttg gagctttttt
     7741 cttattttgt gataacgtca aaagaggcaa aaaagtatat tttttatccc ttggtacaca
     7801 gttttgaaaa tctcttattg ttatatcttg ctcaaattca cccgcatcaa gatttatcac
     7861 aaagaggtac aagggttttt ggcttttgct atcaacatac atccagcagg catgcctgtc
     7921 gttttcgcta ttaagccaaa aaacacgtgc atcttttatt tcttttgtaa ttttttcgta
     7981 caatgacctt atttcagata ttttggcaaa cagttcagcg ttatcgcccc acttaaatgc
     8041 attttcctga taatttgtat agattgagct aaaatattcc ttttcttttt tgcaaaaatc
     8101 cttgagctca tatcctattg cgcaataaga aggagaatcg cagaacaaac ccgtgaaata
     8161 tctgattgca caagacataa cagaagaata gaagattgta ttttcctgtc tgtctgaatc
     8221 atttgtaaaa gatgttgagc aaatcttgaa gttgtaattg taatagttat cgtttcttgt
     8281 tttcaggcga taaatatact catggtttaa gaaaagatag ttcaaatccc caagcacaat
     8341 atcaaagtct ttattttgca agtcctgata accgtctatg taataatcca tgtttaaaaa
     8401 agcttctgca agtactgcaa aataaggctt ttgctcattg atacgggatt ttataaaacg
     8461 ccatatttcc ttttggttgc aaaaaatctt ttcatttctt ttatgcgaat gtgattgctg
     8521 gttatgagcc atatccgcac gcataaaatc aaaattatac tctttttgaa aatcagcata
     8581 aatatcggaa ataaagctcc atacctgctc ttgaggttca tcacagagag gatagccgtc
     8641 tttatcaatc ctgtagagct tgaacggagt taacgctccg aatatttttg cctcgctgga
     8701 catattttct actttaaact ctgaatgaga gccttgagaa tcttgtacta tcttgtcaaa
     8761 tacaacaggc cggcttggcg catgttctgt cacaggaata gtttcaaagc ctgctgaacg
     8821 cacaaaattg ataagagatt ttctgcgttc aagccggagg ttgtcatcat tgccaaacaa
     8881 aattttatca agatacaaaa catcactgcc gtctgtaaaa agctctgtaa tctgtttttc
     8941 agtcaaaaaa gagttgtcag cgcagccatt gagctgcaaa aaagttttta tacagatttg
     9001 tacctctttg tatatcgagt tgaaatcgag ttcataaccc gaatattgtc ttgatttagt
     9061 tttattgagt tttacccatt caaaaaattg cgggtacaaa aatacaagct cactccagcg
     9121 ctctgtatgc aaaagcgcat caaaacagac tactttcccc attgcatgaa gcacattagt
     9181 cacaagtttc agctgttttt caggcgtgtc atatccgtaa gcagacaact cattgtccat
     9241 aaactcttta tttagcctga aattgagcgg agcataaaaa ccgccgtcaa tacccggagt
     9301 ccacaaaggc ataatatgga cacattcttc aggaaaagtc attgcatatt ttacaattcc
     9361 ccaaaaagtt tttgtaattc tcgggtttat gcccattatt ttagcgttat gagaccaagt
     9421 tgtatctttt tgtccttcaa gaaatcccgg ataattttta gatatatcaa aggccttttc
     9481 aatttctttt ttatcaacaa tcttttttaa aaggtctaaa gactgattga atgacatatt
     9541 caaacagtct ttagggttta atttcagata ttttgcgttt accataagta gtcgggataa
     9601 ttttctttat agaatgcttc tattttggcc attatagcat caagctgggg attaattctt
     9661 tcaaagtcct tattaatctc tgcctgattc tttttcagct tttgcatata cgtttcaagt
     9721 tttatctttt ctgtctgaag atatgcaatt gtattatctt tttcttttag ttttttcttg
     9781 ttctcttcaa tagagtctct aaatttattg atttcataca ggttatcgta tttatgctgt
     9841 tctgtttctt ccaaattttt gatatttatt tttgcatgag taatctgtgc attaataata
     9901 tctttttcgg cattataact ttctatcctt gattttgtaa cttttagctg ataatttgtt
     9961 cttaaaattt cttgattatt atccctgttt tttcttaaat agatttcttt ttcaccggat
    10021 ttatcatcca gctctttcaa cagcttgtat ttagccgctg cttttggcag cctttctttt
    10081 gcacgttgta tttgtgcttc ataggcagct tttttgcttt cggattcttc aagtcttctt
    10141 ctgtttaaat cgtaataata gtctgcttct tcagattgtt tatcaaactt gccttcttcc
    10201 cacacgtgat attttttggc tttttcaata cgttcttttt cttcttttgc tatttcaaaa
    10261 tttcttctgt tttcatctac aaaatatttg ctgacgccaa gactcttttt agcatttttt
    10321 tccagttttt cgaagtattc aacttctctt acagcctcat ttgcaaagtt ttggtaaccg
    10381 tttctgtaat tgccttttaa atgttcaaga ttcaagaacg gttcattttt tgtgacaata
    10441 tagtgatatt ttcccttcat ctcatctgta ataaattcgc cctcatca
//
LOCUS       DABS01000076            7295 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9216, whole genome shotgun sequence.
ACCESSION   DABS01000076 DABS01000000
VERSION     DABS01000076.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7295)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7295)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7295
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..1697)
                     /locus_tag="CPT85_02955"
     CDS             complement(<1..1697)
                     /locus_tag="CPT85_02955"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24718.1"
                     /translation="MTEEDLSEIHNYLENNVKILNYLYSITELIQSKRKANFSDDIKT
                     KIDIESAIFAIVEDIKNKRLDWMDKAYSTISQNYEYIEQRIENTSNFLLKAIYSEILY
                     YSNESQFKNYIQQAVENYFKVLKEAGKALSKSSPEDFVHSIIDILKKLLHLAVISKSP
                     AQKDIKKFILEFVRIDTNVTLYHYLIVTIISQMLDYNKLFKKNDFDGIDDIFWNLANL
                     KFKAGDYHYVINIVEKYAHKIDDKRGKLSYPWDDLLGKSLVKSMDTANSNMAARSWCI
                     DAIKHYSRIMNKYTNKVKLLEQKYITFKDKLEISEFRQSIDTEPFIDTAKDVLNNKPI
                     DIFKILSASNIFYPTLESLKNKYGCLTDIIPTSYLDHNMHPAKISSSKTEQDVLLRNY
                     SNFWQLYQITVQYIFIEGVRENKFNVQDLMTFLMNYSCFFDLIPKSVSRNKRIKYNWS
                     ATIISIFETYFNEMHKWFKNPKMYYPYLVTITESLVLKFETWIRHYLACHKQPTISSI
                     PQENGIIREKDLNFLLYDDFIIKKFDFNDLLFFRYLFIAKEGLNLRNEIAHGVLIPE"
     gene            complement(1727..2568)
                     /locus_tag="CPT85_02960"
                     /pseudo
     CDS             complement(1727..2568)
                     /locus_tag="CPT85_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011745013.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2199..2200
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2700..4034
                     /locus_tag="CPT85_02965"
     CDS             2700..4034
                     /locus_tag="CPT85_02965"
                     /inference="COORDINATES: protein motif:HMM:PF07693.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24719.1"
                     /translation="MENQLVEVNNTSAFSDDKLNRKFLAENLKRILLNTDYNVFSINA
                     PWGGGKSYFIENLAALIGDEAICISYNAWESDFYNNPLVPLVTELMYKLEQVIPEKDK
                     IFKALKNTIKDIFDKITFNASIGPFGFTYDPNKPTVKSDYIALKKLKKKLRSGLGFLQ
                     EKLNKNIIIFVDDLDRCNPKYAIETLETIKHFFGIKNIIFVLAVDKKQVENIVKTIYG
                     IAPETSDIEGYLKKFIDVEFNLPAPIYTDFISFHLQQIVECSKPFIETQRWYCYGEII
                     NGRYIDNIEYKGLIANTVEQLVSSLNLTPRMIEKLFMRVKLTIESLGEDDLLLPEVIF
                     ILNVLYICDKKAFDSYVKTEAYNANLGDLGIKINKVYPYWTSVLNNFNEIYKTCHKKD
                     KISLGTNESNILNLVNLIQQSAYRSHIYPFEQDIVKYLKSYASKIEFIGSMD"
     gene            4176..4628
                     /locus_tag="CPT85_02970"
     CDS             4176..4628
                     /locus_tag="CPT85_02970"
                     /inference="COORDINATES: protein motif:HMM:PF00753.25"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24720.1"
                     /translation="MKLTILADNNTSIDKYYLGEPAFCVYVEASGQKILFDTGYSDVF
                     LQNAKKAGIDLSQAGYVVLSHGHNDHTGGLKYFKEIVKESKPFLVACPEAFKQRYDCD
                     GEFGCPVSKQEIEKYFTPVYTKEPYFISSNIAFLGRIKRQNDFEAQSX"
     gene            4609..4983
                     /locus_tag="CPT85_02975"
     CDS             4609..4983
                     /locus_tag="CPT85_02975"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24721.1"
                     /translation="MKHNXXNKETKEPDFVPDDSALAINTQKGIVILTGCSHSGIVNI
                     CRYAQEIFQTHKIHSIIGGLHLINAPKRQLELTFNYLESLNLETLYPCHCTGFKAQCM
                     LSSLKSFRECSSGLVINFDFAI"
     assembly_gap    4623..4624
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5024..5419
                     /locus_tag="CPT85_02980"
     CDS             5024..5419
                     /locus_tag="CPT85_02980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003022952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dinitrogenase iron-molybdenum cofactor
                     biosynthesis protein"
                     /protein_id="DAB24722.1"
                     /translation="MKIAVTYDENQNVFQHFGHTEQFKIYEIENNEIISSKILSSDGE
                     GHSALAQLLENENIDKLICGGIGGCAVNALGQAGIEIFAGISGSADEAVNALLNGTLE
                     QTTSPNCNHHGEGHQHHHGEGHSCGHSCH"
     gene            5492..6640
                     /locus_tag="CPT85_02985"
     CDS             5492..6640
                     /locus_tag="CPT85_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013115096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="DAB24723.1"
                     /translation="MRDKTFLMIPGPTPVPESILLAMAKHPIGHRSTEFSAILEETYA
                     DLKWLFQTQNDVFIYTSSGTGAMEGALSNLVNEGDKVLSLVIGNFGARWAKIAAKLGA
                     DVEKIEVEAGKAIDPKVLKERLDADVNKEIKIVTLTHNETATGVTNPLKELVALIKEH
                     GAVSVVDGVTSVGAIECKMDEWGIDVLISGSQKGFMIPPGLAFLAASEKAFKMHEQCK
                     HPSFYFDWSAYRKSVRANSTPYTPAVNLIVALNEALKMMKKDGLENILKRHAKHAKAL
                     RAAIKAIGLKPMVEDDAIASNAITSIYPPEGISVPDIRSTLKKDFDIVVANGQNDLKD
                     KIFRMGTLGFVCDRDVLAAVSSLEASLHKLGYKFELGSGVKAAIENLV"
     gene            complement(6671..7012)
                     /locus_tag="CPT85_02990"
     CDS             complement(6671..7012)
                     /locus_tag="CPT85_02990"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24724.1"
                     /translation="MKKLILIDFDGVLNKYSGDFRPDYIPPLNSQAEDMLKKLHKRYN
                     LKLFTTRNATLAAQWLSENNLDSYFVGITNIKELCWLFIDDRSICFDGDYETLYEKVK
                     YFKPWYKKVEI"
     assembly_gap    7058..7072
                     /estimated_length=15
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7096..>7295
                     /locus_tag="CPT85_02995"
     CDS             7096..>7295
                     /locus_tag="CPT85_02995"
                     /inference="COORDINATES: protein motif:HMM:PF01381.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="DAB24725.1"
                     /translation="MNRESLLKKFGKNVKIERIRKDLTQEHLAEKMNVSQKYISIIEG
                     GKANMSLVKILELSQFLETDIE"
BASE COUNT         2427 a         1242 c         1210 g         2397 t
ORIGIN      
        1 tgttccggaa ttaaaacacc gtgtgcaatt tcgtttcgta aattcaaacc ttcttttgca
       61 ataaacaagt acctaaaaaa cagcaggtca ttaaaatcaa actttttaat aataaaatca
      121 tcatatagta aaaaatttaa atctttttct cgaataatgc cattttcttg tggaatagat
      181 gatattgtag gttgcttgtg acaggctaga taatgtctta tccaagtttc aaatttaaga
      241 acaagacttt ctgttatggt tactaaatag ggatagtaca ttttaggatt tttaaaccac
      301 ttatgcattt cattaaaata agtttcaaaa attgatataa ttgttgcact ccagttatat
      361 tttattcgtt tatttcttga tacagattta ggtattaaat caaaaaagca gctataattc
      421 atcaaaaatg tcattaagtc ttgaacatta aatttattct ctctaacccc ttcaatgaat
      481 atatattgta ccgtaatttg gtacaactgc caaaaatttg agtaattacg cagcaataca
      541 tcctgttctg tttttgagga tgaaatttta gcaggatgca tattatggtc aagatatgat
      601 gtaggtatga tatctgttaa gcatccatat ttatttttaa ggctctctaa tgttggataa
      661 aagatattcg aagctgacaa aattttaaaa atatcgatag gtttattatt taaaacatct
      721 ttagcagtat caataaaagg ttctgtatca atagactgcc taaactcaga aatttccaat
      781 ttatctttaa acgttatata tttttgttcc agtagcttta ctttatttgt atatttattc
      841 attattcgag agtaatgctt tattgcgtca atgcaccaag agcgggcagc catatttgaa
      901 tttgcagtat ccatagattt tactaaagat tttcctaaca aatcatccca aggatatgac
      961 aattttcctc ttttatcatc aattttatga gcatattttt caacaatatt aataacgtaa
     1021 tgataatcac cggctttaaa tttaagattt gctaaattcc aaaaaatatc atctatgcca
     1081 tcaaaatcat tttttttaaa caatttattg taatctagca tttgcgatat tattgtaacg
     1141 ataagataat gatagagtgt aacattagta tcaattcgta cgaattccaa tatgaacttt
     1201 ttaatatctt tttgtgccgg cgatttagat attacagcta aatgtaaaag ttttttcagt
     1261 atatcaatta ttgaatgaac aaaatcttct ggtgaagatt ttgataaggc ctttcctgct
     1321 tcttttaata ctttaaaata attttctacc gcctgctgaa tgtaattttt aaattgactt
     1381 tcattagagt agtataatat ttctgagtat attgctttaa gaagaaagtt tgatgtattt
     1441 tctattcttt gctctatata ttcataattt tgagatattg tactgtaagc tttatccatc
     1501 caatctaatc ttttattctt aatatcttca acaattgcaa aaatagcact ttctatatca
     1561 atttttgttt taatatcatc agaaaaatta gcttttcttt tagattgaat aagttctgta
     1621 attgagtaaa gatagtttag tattttaacg ttattttcca aataattatg aatttctgat
     1681 aagtcttctt ctgtcatcta aaaatgtatt ttctttcttt taagttttac tttttctttt
     1741 caatattttt ctgtttctgt gcaggtaaaa agttttcacc ggtgacaacc tttttgccgg
     1801 tttcaagttc gagtttttca cgggcttgtt tggcgatatt tccgccgcgt tttgctgatt
     1861 ttttgttttc agaaaaacct gttgcctctt cactctctgc aatttgtctt gtggaaagtt
     1921 cagccagtgc ggtaaaaatc aattctgctt ctgacatatg gtcacgcagg ttttgtgaat
     1981 tcaaattttt taattgtttg tgttctttga ccgttagtcc tgtccattct ttatgtataa
     2041 tacttgttag tgcagcaaat tcttgtttct ccttaattcc gtgttcagcc cagtaatcag
     2101 tcaatttatt tctagtttcc tgtccggaca ttctttgttg aatccatttt tcacttctgc
     2161 cctgtttttg ccatatattt cttgctctgt ccaatgcann gtggaggggt cagcaagctc
     2221 tttcatcctt tcataaccta cccgggcaag ccactgttta accggttctg cttttttgct
     2281 cggaacagac tgtataatac gcaaaagagt ttctacatca gcacagtcag tttctctttt
     2341 tttaccatcc ggtgcagtta atttcaactg tacgattttt tcgtacagtt gactaaaacc
     2401 ctcttcatca gagagtttta tctttaagtc actccaatat cttcttggat ttttactctc
     2461 tgttaggata ctaataatat cgataatcga aaaataccat ttttcagaat cctcatcata
     2521 tgatgagcga acctgttgtt ttacaaatag ttttaaatct tctgccataa cttctcccct
     2581 aaatatgtac tattatagca tactttgccg gcatgccggc agctgacagc tttattaaaa
     2641 ttacttaaag aaaaaattct ttatttgaaa atcagaaaca aaattgttat attaagtaaa
     2701 tggaaaatca acttgtagaa gtgaataata ccagcgcatt cagtgacgat aagctaaaca
     2761 gaaaattttt agcagaaaat ctgaaacgta ttttgttgaa cactgattac aatgtatttt
     2821 caataaatgc gccgtggggt ggtggcaaat cttattttat agaaaacctt gctgcattga
     2881 taggtgatga ggctatctgc atttcgtaca atgcgtggga atccgatttt tacaacaatc
     2941 ctcttgtacc gcttgttact gaattaatgt ataagttgga gcaggttata cctgaaaaag
     3001 ataaaatatt taaagccctt aaaaacacaa taaaagacat atttgacaaa ataaccttta
     3061 atgcaagcat aggacccttt ggttttacgt atgaccctaa caaaccaact gttaaatctg
     3121 attatattgc attaaagaaa ttgaaaaaaa aattaagaag cggacttgga tttctgcaag
     3181 aaaaactaaa caaaaatatc ataatatttg ttgatgacct agaccgctgt aatcctaaat
     3241 atgccattga aacacttgaa acaatcaaac acttctttgg cataaagaat ataatttttg
     3301 tgttggctgt ggataaaaag caggttgaaa acattgttaa aacaatctat ggtatagcac
     3361 cggaaactag tgatatagaa ggatatttga aaaaatttat tgatgtggaa ttcaatctgc
     3421 ctgcaccgat atatactgat tttataagct ttcatttaca gcaaatagtt gaatgttcta
     3481 aaccttttat tgaaactcaa agatggtatt gttatggtga aataattaat ggtcgatata
     3541 ttgataatat tgagtacaaa ggattaatag caaacacagt tgaacagtta gtttcaagtt
     3601 taaatctcac tcctcgaatg attgaaaaac tgtttatgag agttaaactg actatagaat
     3661 ctcttggcga ggatgattta cttcttcctg aggtaatttt tattttaaat gtactgtata
     3721 tttgcgataa aaaggctttt gattcatatg taaaaacaga agcatataat gctaatttag
     3781 gcgatttagg aattaaaata aacaaagttt atccttattg gacgagtgtc ttaaataact
     3841 ttaatgaaat atacaaaact tgtcacaaaa aagacaaaat aagcttaggt actaacgaat
     3901 ctaatatatt aaatttagtt aacttaattc aacagtctgc ttataggtca cacatatatc
     3961 cttttgagca agatatagtc aaatacctca aatcctacgc ttcaaaaatc gaattcatcg
     4021 gaagtatgga ttaatacttt acgccacatt cctcaactca taaaattgct gcagggtgac
     4081 aacaatctgg ttgaaatctt ttttcaaatg gagtaccatt ttaaaagagc tggatggctc
     4141 tttttttatg cataaattaa tggtatcttc taaatatgaa attaacaatt ttagcggaca
     4201 ataatacgag tatcgacaaa tattatcttg gcgagccggc gttttgtgtt tatgtcgaag
     4261 catccggaca aaaaatcctt tttgatacgg gttattctga tgtgttttta caaaatgcaa
     4321 aaaaagcagg aattgacctt agtcaggccg gatacgttgt cctgtctcac ggacataacg
     4381 accatacagg ggggttaaag tattttaaag aaattgtaaa agaatcaaag ccgtttcttg
     4441 ttgcctgccc tgaagcgttt aaacagcgct acgactgcga cggagagttt ggctgccccg
     4501 tatccaaaca ggagattgaa aaatacttca ctcccgtcta cacaaaggaa ccgtatttta
     4561 tctcaagcaa tattgcattt ttaggacgaa tcaaaagaca aaacgatttt gaagcacaat
     4621 cannttaata aagaaacaaa agaacccgat tttgtacctg acgacagcgc acttgcaatc
     4681 aacacgcaaa aaggaatcgt tattttaaca ggctgctctc actccggcat agtaaacatc
     4741 tgccgatacg ctcaagaaat ttttcaaaca cataaaatcc actcaataat aggcggcctg
     4801 catttgataa atgcgcctaa aagacagctg gaattgacgt ttaactacct agaaagcctg
     4861 aatttagaaa cactttaccc ctgccactgc acgggtttta aagctcaatg tatgctcagt
     4921 tctttaaaat cattccgtga gtgctcatca ggactggtta taaattttga ttttgctata
     4981 taataatatt gatttaagca gtaataaagg agtttaaaca gttatgaaaa ttgcagttac
     5041 ttatgatgaa aatcaaaacg tttttcagca tttcggccat acagaacagt tcaaaattta
     5101 tgaaatagaa aacaacgaaa tcatctcttc aaaaatactt tcttctgacg gagaaggcca
     5161 cagcgcgctt gcccagcttt tggaaaatga aaatattgac aaactcatct gcggaggaat
     5221 cggcggatgt gctgttaatg ctcttgggca agccggcatt gaaatttttg cgggtatttc
     5281 aggcagcgct gacgaagctg tgaatgcttt gctaaacggc acattggaac agacaacttc
     5341 tccaaattgc aaccatcacg gcgaaggaca ccaacaccac catggagaag ggcattcctg
     5401 cggacatagc tgccattaaa aaatctgctt tataaattcc aaaaaatatg agacaataat
     5461 tttgtcttat aagatttgag gagtttatat aatgagagat aaaacatttt tgatgattcc
     5521 cggccctaca cccgttcccg aaagcatact gcttgctatg gcaaaacacc ctattgggca
     5581 cagaagcacg gaattttccg caattctgga agaaacttat gcggatttaa aatggctttt
     5641 tcaaacacaa aacgacgtgt ttatttatac ttcaagcggc accggagcta tggaaggcgc
     5701 tttgtctaac cttgtaaacg agggtgataa agttctttcg cttgtgatag gaaactttgg
     5761 cgcaagatgg gcaaaaatag cagcaaaact cggagctgat gttgaaaaaa ttgaggtaga
     5821 agcaggcaaa gcaatagacc cgaaagtttt gaaagaaaga cttgatgccg atgttaacaa
     5881 agaaattaaa atcgttactc taacacataa cgaaaccgca acaggcgtaa caaatccctt
     5941 aaaagagctt gttgcattga taaaagaaca cggtgctgtt tcagttgttg acggcgtaac
     6001 ctctgtcggc gcaatcgagt gcaaaatgga tgaatgggga attgatgtac tgatttccgg
     6061 ttctcaaaaa ggctttatga ttccaccggg gctggctttc ttagcagcaa gcgaaaaagc
     6121 attcaaaatg cacgaacagt gcaaacaccc gtcattctac tttgactgga gcgcatacag
     6181 aaaatcagta agagcaaatt ccacacctta cacacctgct gttaatctca ttgtggcttt
     6241 gaatgaggct ctaaaaatga tgaaaaaaga cggactggaa aatatactta aacgccacgc
     6301 aaaacatgca aaggcgcttc gtgctgcaat taaagcaata ggactaaaac caatggtaga
     6361 agatgacgcg attgcttcaa acgcaatcac ttcaatctat cctccggaag gtatcagcgt
     6421 gcctgatata agaagcactc tgaaaaaaga ctttgacatt gtggttgcaa acggacagaa
     6481 tgatttgaaa gacaaaattt tcagaatggg aactctcggc tttgtctgcg acagagatgt
     6541 gctcgcagct gtaagctcgc ttgaggcaag ccttcacaag ctcggttaca agtttgaatt
     6601 aggctccggc gtcaaagcag ccattgaaaa tcttgtttaa cataaaaagg agcgataatc
     6661 gctccttttt ttaaatttct acttttttat accagggctt aaaatattta actttttcat
     6721 ataaagtttc ataatcccca tcaaaacaaa tacttctatc atctatgaaa agccaacaca
     6781 attcttttat atttgttatg ccaacaaaat aagaatcaag attgttttct gacagccact
     6841 gtgcggcaag ggttgcattt cttgttgtaa ataatttcaa attataacgc ttatgcagtt
     6901 tttttaacat atcttctgcc tgagagttta atggagggat gtaatcagga cgaaagtcac
     6961 cagaatattt atttaatact ccatcaaaat caatcagaat taattttttc atatccacta
     7021 ttcctactat ttataaatag tattttatac cttatacnnn nnnnnnnnnn nngaatattt
     7081 atatacttat aagttatgaa tagagaaagt ttacttaaaa aattcggcaa aaatgttaaa
     7141 attgaaagaa ttcgcaaaga tttaacacaa gagcatcttg ctgaaaaaat gaatgtttct
     7201 caaaaatata tttcgataat tgaaggcgga aaagcaaata tgtcacttgt caaaatcctt
     7261 gaattatcac agtttttaga gactgacata gaaaa
//
LOCUS       DABS01000077            8631 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_10045, whole genome shotgun sequence.
ACCESSION   DABS01000077 DABS01000000
VERSION     DABS01000077.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8631)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8631)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8631
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            6..614
                     /locus_tag="CPT85_03000"
     CDS             6..614
                     /locus_tag="CPT85_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012451854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="DAB24702.1"
                     /translation="MGTNAYLLIDEDSKEAAVIDLGGDFTPVKNEIEKQGAKLKYILN
                     THGHFDHIFGEKDAQSMTDAPVYIHEEDKYLAQNLPKQLERFGFVQNVEAPCDLHTFT
                     DKDTFSLGKNEIKVIHTPGHTPGSVCFLVGKHLFSGDTLFYTSVGRTDFEGGSFAQLS
                     NSIKEKLFKLDDDIDVYPGHDSKTSIGYEKKYNCYFGSQAGM"
     gene            complement(618..2207)
                     /locus_tag="CPT85_03005"
     CDS             complement(618..2207)
                     /locus_tag="CPT85_03005"
                     /inference="COORDINATES: protein motif:HMM:PF03063.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24695.1"
                     /translation="MNMDYGENMSYNDCAVDGYCSIDPIMYSLMEVLLYELKQITYYY
                     IKMQELGYENKALKSRIINYLSLILIGYEFNREEFQALLKEIHKEKESVKEAYTAFCD
                     EKNMDCQILKSNIKFEKFDLSSIVNQGEQQAIRRNSSLSADVKNLYEIILNLIKSASI
                     RLIELKCYTEDYLPEEDGILKLFNNLNFSAMTESKLIKKVNDFAQINYQIHKKLHVFK
                     EEYYGAIGLHDVSIGVEKGKSILVSGQNLKDLENLLEAVKDTDINVYTHNGLIVAHAY
                     PKFAKYKNLKGHFQMSMDSVQYDFTTFKGPVLVIRNFQYLLDKLYRGRLFTTNLIAGK
                     GMTRIEKNNFKPLVDAAENSQGFDRDHSIAQVKVGYDEELVMQKVDKIIEKIKNKDIK
                     HLIVVGLLNHAAMHSQYFDVLEENLSDDHYVITTVIPSKKENILYFDSFFNSSLIYKI
                     LSHIKKHVDLDKFPVSVFITTCNLHTMSHIFNLKYLGINSIYLPECTSNIITPNMLKF
                     LKEKFDIKQVSDDPKKDLKNL"
     assembly_gap    2281..2290
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2353..5007
                     /locus_tag="CPT85_03010"
     CDS             2353..5007
                     /locus_tag="CPT85_03010"
                     /inference="COORDINATES: protein motif:HMM:PF00675.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24696.1"
                     /translation="MLDFSTRFKKFLILSVMTLVTMCQCVFAQDYNSYKLDNGQTVII
                     KEVHDNPIVTIDTWIKTGSINENDQNNGVAHFLEHLFFKGTPKHPTGEFDRIMDSKGA
                     ETNAATSKDFTHYYITLPSKYFQTAMDLHADMLMNPQIPRKELEKERKVVIEEISKTN
                     DNPETKLYENMINAFYVNHPYKRKVIGKKEIIENITREEILDFYNTWYNPSNMITVVV
                     GDVNTQDALNLIKQNFNRKCKNSAQNPKYKTDKNIEKQIEILAKDKVKTGYMMIGFRG
                     VPQENRADSYALDVLATILGDGRSSKLYQTVKEQKQLAYSISAGHASMKDDSILFVRA
                     NFVPANKDKVKKAIFDEINRVRNGNFDEQDITTAKNIIERDTFYSRESASNIANELGY
                     TTLVYGDTKYYEEYISNIKKVTKADIIRVAKKYLNPNHAVISVMLPDSIPQENIKKIS
                     AVMKKEPVVVSTDKNITKYLLPGDITLIINHNNLNDIVAMQIIAKGGNYIEKKAGTGA
                     ITASAMMKGTKKYSSLDLSQVMEQNGIKIAPANGSDYFSIAVKTTRNDLALTFDLLNE
                     IINNASFEPQEIARVKAEQIQNIQKNRDMPASTAFEEFKTAIWAGTPYGVTGKVLEKT
                     IPTIEKSDVLAFYNTVFCPQNLVISINGNVDDKAVIDSITDIFGTNKADNKNVQRFEY
                     NKYKNLFKHPQKQQTVKKDKDVEAAWLVMGWLTDGVENQKDIAALQVIDSILGGGMSS
                     RLFTGLRAEQGLAYQVGSSFAANVNQGVFALYIGTNPQTALHSKNELLKQINILKKEF
                     VSEKELQEAKDKILGSFILSQETNMEKASTLGWFETSGRGYQYIDEFPQLIQCVTPSD
                     IIRVANKYFGPDYTFAIVAPAKYLKQFK"
     gene            complement(5008..5949)
                     /locus_tag="CPT85_03015"
     CDS             complement(5008..5949)
                     /locus_tag="CPT85_03015"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00551.17,HMM:PF02911.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24697.1"
                     /translation="MFSNLILGTLDSKNKIVGVFRHERVAIHPWLLFFKDIFAPGKDL
                     SFIKSFKLKEIKARSVNSKEFQKAVLKLNPDIILVGSWSEKFKKPIIDLPKIGTINCH
                     PSLLPAYRGPNPYMRVIMNEEKETGITFHLMDENLDTGPILLQKKIDIVQGFNGDTGE
                     TLKNKCCVLAREGIKELLCSMEDEIIVPVNQNAKDASYYPQISEKDILIDFTKTSAQI
                     NALVRALTPWQPAYIAHKNAFLQVGKIKFFENKTKFHTDRYKPGLVLKKNNKAMWILT
                     GDDKIAKIQGLKLFGRLGHIFTPLYLQFFVKSGDICR"
     assembly_gap    5955..5960
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(6028..6369)
                     /locus_tag="CPT85_03020"
     CDS             complement(6028..6369)
                     /locus_tag="CPT85_03020"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24698.1"
                     /translation="MANVANCKKCGALFLQSGKRDICDKCFEEQNKLISEINSYVTLS
                     GEQFIPVEDIMTKFNITRNEFEAFFLAGKFVRISNKVTIKCAKCGKVIPIENRTNFLC
                     NECAKKLQNEI"
     gene            6559..6897
                     /locus_tag="CPT85_03025"
     CDS             6559..6897
                     /locus_tag="CPT85_03025"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24699.1"
                     /translation="MDNNFNSFDNLETSIRKSSVIQERINLVSTHMYKQFLEYQRSTM
                     NATETFVKITDNMQSTVEYLKQSFGARGVATDNIFFETDETNTVLVLHILWHTISFTT
                     RWNNXSVQRR"
     assembly_gap    6878..6879
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6899..7177
                     /locus_tag="CPT85_03030"
     CDS             6899..7177
                     /locus_tag="CPT85_03030"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24700.1"
                     /translation="MPMISNRIIALKGNFHEIIKDVKEEDQLQTVLEQEVASLFIPAE
                     RGQNCIIKINHLGNKEFYINHMDAPREFLLKVIETICGGGIYHEELRQ"
     gene            7268..7339
                     /locus_tag="CPT85_03035"
     tRNA            7268..7339
                     /locus_tag="CPT85_03035"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:7300..7302,aa:Thr,seq:tgt)
     gene            7392..7463
                     /locus_tag="CPT85_03040"
     tRNA            7392..7463
                     /locus_tag="CPT85_03040"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:7424..7426,aa:Thr,seq:ggt)
     gene            7483..7568
                     /locus_tag="CPT85_03045"
     tRNA            7483..7568
                     /locus_tag="CPT85_03045"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:7517..7519,aa:Tyr,seq:gta)
     gene            complement(7620..>8631)
                     /locus_tag="CPT85_03050"
     CDS             complement(7620..>8631)
                     /locus_tag="CPT85_03050"
                     /inference="COORDINATES: protein motif:HMM:PF07690.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="DAB24701.1"
                     /translation="GVVTGAILLVLSARTKPLKTILIWLMSIFTIANLLTAAAFNYHV
                     FCTMRFLAGLPHGAFFGVGAIAAGKIADNDKGNQAVATMVAGMTVANLLGIPLGTFIS
                     HNFSWRITFLIIGLFGFVILYSIFKLVPNIKPLPDTGFRGQFKFLKSLAPWLLIMAVI
                     MGNGGIFCWYSYVNPLLVKVSGILPGYISLVMVLAGAGMCIGNYLGGKLSDKFSPSSV
                     AALTQLIACVALLLIFFFSSNAFASVVLMCVCTGCLFAVSAPQQVLLIDNAKGGEMLG
                     ASFSQISFNLGNAIGAFVGGLPVTCGLTYNYTAVPGACFAFLGFCMLFYFYKRYVRVK
                     KA"
BASE COUNT         2935 a         1716 c         1554 g         2408 t
ORIGIN      
        1 gacttatagg cacaaacgcg tatcttttga ttgacgaaga ctcaaaagaa gccgctgtaa
       61 tagaccttgg cggtgatttt acgcctgtaa aaaacgagat agaaaaacag ggcgcaaagc
      121 tcaaatatat tcttaacact cacgggcatt ttgaccatat ttttggcgaa aaagacgcac
      181 aaagcatgac agacgcgcct gtgtatatcc atgaggaaga caaatacctc gcacaaaatc
      241 tgccaaaaca gctggaaaga tttgggtttg tacaaaatgt tgaagccccc tgtgaccttc
      301 acacatttac tgataaggat actttttctt taggcaaaaa cgaaataaaa gtaatccaca
      361 cacccggcca cacacccggc agtgtttgtt tccttgtcgg gaagcatctt ttctcgggtg
      421 acacgttgtt ttacacttca gtgggaagaa cagactttga aggcggcagc tttgctcagt
      481 tgagcaattc tataaaagaa aaactcttta agcttgatga cgacatcgat gtttaccccg
      541 gtcatgactc aaaaaccagc ataggttacg aaaaaaaata caactgttat tttggttcac
      601 aagcaggaat gtaaaattta aagatttttc aaatcttttt tcgggtcatc agacacctgt
      661 ttgatgtcaa atttttcttt caaaaacttg agcatgttag gagtgatgat gtttgacgtg
      721 cattcaggca gatatatgct atttatgcca agatatttta aattaaaaat atgagacata
      781 gtgtgaaggt tgcatgtagt tataaacaca ctgactggga atttgtcgag gtcaacatgt
      841 ttttttatgt gagaaagaat tttgtaaatc aaagacgagt taaagaatga atcaaaatac
      901 aaaatgtttt ctttttttga aggaataacc gttgtgatta cgtaatggtc gtcgctcaag
      961 ttttcttcaa gcacatcaaa gtactgagaa tgcatggcag catggttcaa aagccccact
     1021 acaataaggt gttttatgtc tttgtttttg attttttcaa taattttgtc caccttctgc
     1081 ataacaagct cttcgtcgta accgactttg acctgtgcaa tgctgtgatc acgatcaaac
     1141 ccttgagagt tttctgccgc atccacaaga ggtttaaaat tgtttttttc tatccttgtc
     1201 atgcctttgc cggcaataag gtttgtggtg aaaagacgcc ctctgtaaag cttatcaaga
     1261 agatattgaa aatttcttat aacaagcaca ggccccttaa atgtagtaaa atcatactgc
     1321 acgctgtcca tagacatctg gaagtggcct tttagatttt tgtattttgc aaacttgggg
     1381 tatgcatgtg caacaataag cccgttgtgc gtataaacgt tgatatcagt atctttaacg
     1441 gcttctaaaa ggttctccaa atcttttaaa ttctgtccgg aaacaagaat cgattttcct
     1501 ttttctacac ctatagaaac gtcatgcaaa ccgattgcac cgtagtattc ctctttaaaa
     1561 acatggagct ttttatggat ttgatagttt atctgtgcaa aatcattgac ttttttaata
     1621 agctttgact ctgtcatagc agaaaaatta aggttgttga aaagttttaa gattccgtct
     1681 tcttcaggca aatagtcttc tgtatagcat ttgagctcaa tcaacctgat actggcgctt
     1741 ttgataaggt ttagtataat ttcataaagg ttttttacat ccgcactcaa agagctgttt
     1801 cgtcttatgg cctgttgttc accctgattt acaatagagc tcaggtcaaa tttttcaaac
     1861 tttatgtttg atttcaaaat ctgacagtcc atgttttttt catcacaaaa tgctgtataa
     1921 gcctctttga cagactcttt ttctttatga atttccttta acagagcttg gaattcttct
     1981 ctgttaaact cataaccgat taatatcaat gacaaatagt tgataattct gcttttaaga
     2041 gctttgtttt cgtacccgag ctcttgcatt tttatgtaat aatacgtaat ctgttttaac
     2101 tcgtagagca aaacctccat caaagagtac atgatggggt ctatactgca atagccgtcg
     2161 accgcacaat cgttgtatga catattttct ccgtaatcca tattcatacc ggtattttaa
     2221 acaacatgaa tagcattacc attgactaaa cgagcaatta caatatagcc tgatatcccc
     2281 nnnnnnnnnn aaaatatata gtataatttg ttatcaaata aaattataaa gacaaaggga
     2341 gattttaata aaatgctcga tttttcaaca cgttttaaaa agtttttaat cctttccgtg
     2401 atgacgcttg tcactatgtg ccagtgtgtt tttgcacagg attataacag ctacaaactc
     2461 gacaacggcc aaaccgttat cataaaagag gttcacgaca acccgattgt gactatcgac
     2521 acgtggataa aaacaggttc cataaacgaa aatgaccaaa ataacggcgt tgctcacttt
     2581 cttgagcacc tgttttttaa agggacaccc aaacacccca caggtgagtt tgacagaata
     2641 atggactcaa aaggtgctga aacaaacgct gcaacaagca aagattttac gcactactac
     2701 atcacactcc cttcaaaata ttttcaaact gcaatggact tgcacgcaga catgctcatg
     2761 aacccgcaga ttccaagaaa agagcttgaa aaagaaagaa aagtcgtaat agaagaaatc
     2821 tcaaaaacaa acgacaaccc tgaaacaaag ctctatgaaa acatgattaa tgcgttttat
     2881 gtaaaccatc cttacaaaag aaaagtaata ggcaaaaaag aaatcattga aaacatcaca
     2941 agagaagaaa ttcttgactt ttacaacaca tggtacaacc cgtcaaatat gattaccgtt
     3001 gttgtgggtg atgtaaacac acaggacgct cttaatctta tcaaacaaaa ctttaacaga
     3061 aaatgcaaaa attctgccca aaacccgaaa tataaaactg ataaaaatat agaaaaacaa
     3121 atcgaaatat tagccaaaga caaagtaaaa acaggctaca tgatgatagg ttttcgcgga
     3181 gtgccgcagg aaaacagagc agacagctac gcgctggatg tgcttgcaac aatattaggc
     3241 gacggccgct cttcaaaact gtatcaaaca gtaaaagagc aaaaacagct tgcttacagc
     3301 atttcagcag gccatgcttc catgaaagac gacagcattt tgtttgtacg tgcaaacttt
     3361 gtacccgcaa acaaagacaa ggttaaaaaa gcaatttttg acgaaataaa cagggtaaga
     3421 aacggaaact ttgacgaaca ggatattaca acagcaaaga atatcattga aagagacacg
     3481 ttctactcaa gagaatccgc ctcaaacatt gctaacgaac tcggctacac aacacttgtg
     3541 tatggtgaca caaaatacta cgaagagtac atctcaaaca tcaaaaaagt aacaaaagca
     3601 gatatcataa gggttgcaaa aaaatacctc aacccaaatc acgcagttat ttccgtcatg
     3661 ctgccagatt caatcccgca ggagaatatt aaaaaaatca gtgctgtaat gaaaaaagag
     3721 cctgttgttg tgagcacgga caaaaacatt acaaaatatc tgcttccggg tgatattacc
     3781 ctcatcatca accacaacaa tctaaacgat attgtggcaa tgcagataat tgccaaaggc
     3841 ggaaactata ttgaaaaaaa agccggaaca ggcgctataa cagcctctgc aatgatgaaa
     3901 ggcacaaaaa aatactcttc tttagacctg tcacaggtta tggagcaaaa cggcataaaa
     3961 atagcaccgg ccaacggttc ggattatttc tcgattgcag taaaaacaac cagaaacgac
     4021 cttgcgttaa catttgattt gctaaatgaa attataaata atgcctcttt tgaacctcaa
     4081 gaaattgcaa gagtaaaggc agaacaaata caaaacatac aaaaaaaccg cgacatgccg
     4141 gcaagcaccg catttgaaga attcaaaacc gccatctggg cgggcacacc ttacggagtc
     4201 acaggcaaag tgcttgaaaa aaccataccg actatagaaa aatctgacgt gctggctttt
     4261 tacaacacag tattctgtcc gcaaaactta gtcatttcaa taaacggaaa tgtggatgac
     4321 aaagctgtta tagacagcat tacagatatt ttcggcacaa acaaagccga taacaaaaat
     4381 gtccaaaggt ttgaatacaa taaatacaaa aacctgttca aacatccaca aaagcagcaa
     4441 acagtaaaaa aagacaaaga cgttgaagca gcctggttag tcatgggctg gttgacagac
     4501 ggtgtggaaa accaaaaaga cattgcagcg cttcaggtca tagactctat cctcggcggg
     4561 ggaatgagct caagactctt cacaggtctt agagcagagc agggtctggc ttatcaggtc
     4621 ggctcaagtt ttgcggcaaa tgttaatcag ggtgtttttg cgctctacat cggcacaaac
     4681 ccgcaaacag cacttcattc caagaatgaa cttttaaaac aaatcaatat actcaaaaaa
     4741 gagtttgttt cagaaaaaga gcttcaagag gcaaaagaca aaattctggg cagctttata
     4801 ctctcacagg aaaccaatat ggaaaaagcc tccaccctcg gatggtttga aacttccggc
     4861 agaggatacc agtacatcga cgaatttccg cagcttatac agtgcgtaac accttcagat
     4921 ataataaggg tggcgaataa atacttcgga cctgactata catttgccat agtcgctccg
     4981 gcaaaatatc ttaaacagtt taaataatta acggcaaata tcgccggact tcacaaaaaa
     5041 ttgcagataa aggggcgtaa aaatatgccc cagtctgcca aaaagcttta agccctgtat
     5101 tttggcaatc ttgtcatctc ctgtcaaaat ccacatggct ttgttatttt tcttcaacac
     5161 aagacccggt ttgtatctgt ctgtatgaaa ttttgttttg ttttcaaaaa atttaatttt
     5221 acccacctgc aaaaacgcat tcttatgagc aatataagca ggctgccacg gggtgagcgc
     5281 ccgaacaaga gcatttatct gtgctgatgt ttttgtaaaa tctatgagta tatccttttc
     5341 gctaatctgc gggtaataag aagcgtcttt tgcattttga ttgaccggca cgattatctc
     5401 atcttccatg gagcataaca gctcttttat cccttcgcgc gcaagcacac agcatttgtt
     5461 tttgagggtc tcgcccgtat caccgttaaa cccctgcaca atatctattt tcttttgcag
     5521 cagaatcggg cctgtatcta ggttttcatc cataaggtga aaggttatgc ctgtttcttt
     5581 ttcttcattc attatcaccc tcatataagg gttagggcct ctgtatgcag gcaaaagcga
     5641 cggatggcag ttgattgtgc cgattttagg aaggtcaatt ataggttttt taaacttttc
     5701 gctccacgac cccacaagaa ttatgtcagg attgagcttg agcacagctt tttgaaactc
     5761 ttttgagttt acgcttcttg ctttgatttc tttgagttta aaacttttga taaaagatag
     5821 gtcttttccc ggggcaaaaa tatctttaaa aaacaacagc cacggatgta ttgccaccct
     5881 ttcatgccgg aagacaccca caattttatt tttagagtcc agtgtcccta aaataagatt
     5941 ggaaaacatt ttatnnnnnn attactattt tcattatttt ttaaaatggt ttgcaacaag
     6001 cagatccagc aaagagtcaa attgctttca aatttcgttt tgtaatttct ttgcacattc
     6061 attgcaaagg aagtttgttc tgttttctat cggaataact tttccgcatt ttgcacattt
     6121 aatagtaact ttattagaga ttcttacaaa tttacctgca aggaaaaatg cttcaaactc
     6181 atttcttgtt atattaaact ttgtcatgat gtcttctacg gggataaact gttcaccgga
     6241 aagtgtaacg taagaattta tctcgcttat taatttattt tgttcttcaa aacatttatc
     6301 acaaatatct cttttgcctg actgaagaaa taatgctccg cattttttac aattagctac
     6361 gttagccata atcctacctt cttaacctaa cttagatagt aaaatattag ctaaactatc
     6421 taaaaaaagc aagtaaaatc atcttgacaa cagataaaaa taaattgtat aagtgtgttg
     6481 gattgtaaaa aaaatttact aaactgtaca agtaatgtaa atttttgtgt acaatattat
     6541 caagagaaga gagagatatt ggacaacaat tttaacagct ttgataacct cgagacatcg
     6601 attagaaaat cctctgttat tcaagagagg attaatcttg tgtctactca catgtacaaa
     6661 cagtttttgg aataccagcg ctctacaatg aacgctacag aaacttttgt taaaatcaca
     6721 gacaacatgc aatctacggt cgaatatctt aaacagtcat ttggcgcacg cggggttgct
     6781 acagacaata tcttttttga aacagatgaa actaatacag tgcttgtttt gcacatactg
     6841 tggcatacaa tcagctttac cacaagatgg aacaaccnnt ctgtacagag gcgttgaaat
     6901 gcctatgatt tcaaacagaa tcattgcatt aaaaggcaat ttccacgaaa taatcaaaga
     6961 tgtgaaagaa gaagaccagc tgcaaacagt tttggaacag gaagttgctt ctttgttcat
     7021 tccggcagaa cgcggacaaa actgcatcat aaaaatcaac catctcggta acaaagaatt
     7081 ttatataaac cacatggacg cgccaagaga atttctttta aaagttatag aaacaatatg
     7141 cggcggcggc atttatcatg aagaattgag gcagtaattt aaagctgtga agattttgga
     7201 cttaaaatta aaaaaaatct cactgactac ttgacactta aacatgtcct taatattata
     7261 atcctatgcc gaagtggctc aatggtagag caacggtttt gtaaaccgta ggttgtaggt
     7321 tcgattccta tcttcggcat tttctcctaa aaggggggct ggcaagttgt tgaaaaacat
     7381 aaagcccaaa agcctttgtg gcgcaggggt agcgcactcc cttggtaagg gagaggccac
     7441 gggttcaaat cccgtcaaag gcattttttg aaaatttaat atgggtaggt ggccgagtgg
     7501 ctaaaggcga cagactgtaa atctgttccc gcgagggtac ggtggttcga atccacccct
     7561 gcccaccatt aaaaagactc catcaggagt cttttttgtt gaatattatt ttgtaaactc
     7621 taagcctttt ttaccctgac gtatctttta taaaaataaa acaacataca aaaacctaaa
     7681 aaggcaaagc aagctcccgg cactgctgta taattgtaag taagcccgca cgttacaggc
     7741 aacccaccaa caaaagcacc aattgcattg ccaagattaa aagaaatttg agaaaaagat
     7801 gctccgagca tctcaccacc ttttgcatta tctattaaaa gtacctgctg tggtgctgaa
     7861 actgcaaaca agcaacctgt acaaacacac atcaaaacaa ctgaagcaaa agcatttgac
     7921 gaaaagaaga aaattaacaa aagtgcaacg caggctatca actgtgttag cgctgcaaca
     7981 cttgaaggcg aaaatttgtc tgaaagcttt ccgccaaggt aatttccaat acacatgcct
     8041 gcccctgcaa gcaccataac aagcgaaata tatcctggca gaatgccgga aaccttcaca
     8101 agtaaaggat ttacatagct gtaccagcaa aaaataccgc cgttgcccat gataacagcc
     8161 attatcaaca gccatggagc tagagatttt aaaaatttaa attgtccacg aaaacctgta
     8221 tcggggagag gtttaatatt tggtaccagt ttaaaaatgg aatacaaaat cacaaaaccg
     8281 aatagtccta taatcaaaaa agttatacgc caagaaaaat tatggcttat aaaagtacca
     8341 agaggaattc ccagtaggtt tgccacagtc ataccagcaa ccatggtagc aacagcctga
     8401 ttgcccttgt cattgtccgc aattttgccg gcagcaatag ccccaacacc aaaaaatgca
     8461 ccatgaggaa gccccgccaa aaaccgcatt gtacaaaaaa catgatagtt aaaagcagca
     8521 gctgtcaata aatttgcaat tgtaaaaata gacatgagcc atattaaaat tgtttttaat
     8581 ggctttgtac gtgcactcaa tacaagcaaa atagctcctg tcacaacacc c
//
LOCUS       DABS01000078            4255 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_11797, whole genome shotgun sequence.
ACCESSION   DABS01000078 DABS01000000
VERSION     DABS01000078.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4255)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4255)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4255
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            114..494
                     /locus_tag="CPT85_03055"
     CDS             114..494
                     /locus_tag="CPT85_03055"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24675.1"
                     /translation="MANLDNNLNINNAGRAYTPNLKKGEDVKPQTKQEETPVEIINDG
                     TQAADSYGRILVKQAGKVDNPEMVKSIKDAVDFYINNQHLVAAGVKAGDDAYELFHAD
                     EMPNAYEKACCGSCDAVYKKAGKN"
     gene            544..1380
                     /locus_tag="CPT85_03060"
     CDS             544..1380
                     /locus_tag="CPT85_03060"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: protein motif:HMM:PF01513.19"
                     /note="catalyzes the phosphorylation of NAD to NADP;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="DAB24676.1"
                     /translation="MKDNENLLSLKNISIVYNEDVAESLKVAQYTKEILTARGLKTQI
                     NSSTNFNPDSSLVITVGGDGTLLKAARYYAPINVPLLGINLGRLGFLAQANPDEIEAS
                     VDKLLNGEYSLQNRMMLSVFDDNLLALNDIVIKGDSFSRTSKLFLSINNKVVCDYLAD
                     GIIIATPTGSTAYTLSAGGPVMAPELEAVVIVPICPHTLTARPLVIPANETIKISSCK
                     TCNKLKLSADGQDTIDINSQDSIVIKKSSVRAKLVILEKENNEFYSILRKKLKWGVSP
                     ER"
     gene            1382..3037
                     /gene="recN"
                     /locus_tag="CPT85_03065"
     CDS             1382..3037
                     /gene="recN"
                     /locus_tag="CPT85_03065"
                     /inference="COORDINATES: protein motif:HMM:TIGR00634"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="DAB24677.1"
                     /translation="MIKSLKIKDFIIIDELELEFDKGFNVITGETGAGKSIMINAIDL
                     AFGARANKELIKTGKTRAAIELTLDLKENLSQSFLEEYGLEDYGKELIISREITESGS
                     RSRVNGALVTQDVIKLLREMLIDIHNQHMTYTYIQPKYHINLLDSYGDDRHGVLLNEY
                     KAIYSEMKSALKQLEEAKNKTQLTQQQIDFLKFQIDEIAAANIDDVEEDKKLEEELSV
                     LTNFEKLKELTYSSYWSLYGEDGCILDALGKVKSNITKATEMDSSLQEVESEIINAQE
                     ALRELSSSLRSYAESMELDEQRLNEIQERLDNLDKIKKKYGTTLELVLENYTKFEQEY
                     NSIEFAQDETQRLEKLYEEKLNLAAQKAQELSTSRKQMSQTLADTIKKELEKLDMPKV
                     KFEIDIKNSDELLQTGKDIVEFLISTNISESPKPLAKIASGGEISRVMLALKTIFAKS
                     DNINTVIFDEIDTGISGNACQAVAQTIKELAKTHQIISITHQPIIAAKSDCHFYVAKT
                     QEEKTNVKVYTLDTNNKVKAIAMLAAGEITDDSINFAKQLINS"
     gene            3102..3944
                     /locus_tag="CPT85_03070"
     CDS             3102..3944
                     /locus_tag="CPT85_03070"
                     /inference="COORDINATES: protein motif:HMM:PRK00283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase"
                     /protein_id="DAB24678.1"
                     /translation="MFTGRKRPCPKYXTIDAYRRDLTAFCDFLLDTEKIDEFEKIKRI
                     HINCYIKILHDNNYSPTSVTRKIASIRGWFRWLSANEIISQDPSLGIELPRLTKKLPR
                     VISVSEIEEMLNNKLDETQQVIIELLYGAGLRVSELIGLELNNIELSSRYVRCIGKGS
                     KERIIPIGEKAQKAIAGYLKIRQLLIKKYKLETKQFLIKENGHLMTRQDVYVFIKQQG
                     ELLRKHISPHTLRHSFATHMLENGADLRVVQELLGHSDVSTTQLYTHVSKKRLKEVYF
                     SINK"
     assembly_gap    3138..3139
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3954..>4255
                     /locus_tag="CPT85_03075"
     CDS             3954..>4255
                     /locus_tag="CPT85_03075"
                     /inference="COORDINATES: protein motif:HMM:PF02219.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="DAB24679.1"
                     /translation="MNLKEIYTTKKQEPVISYEVFPPKDDIDATKLEKLFDELKKLLV
                     FNPSLISVTYGAGGSNQNESVEIIKRIKQELNVSPMPHFTCVSTSTENIKNYLKTL"
BASE COUNT         1635 a          704 c          790 g         1124 t
ORIGIN      
        1 caaaaaattt tttaagctaa actagcaaaa aaaaatttgt tcatgtttta aagcatgatg
       61 aaagacacga atgaaagaaa aaaagaaaaa agaagaaacc ggagagttaa tatatggcaa
      121 atttagataa caatttaaat ataaataatg ctggcagagc atatacacca aacttaaaaa
      181 aaggtgaaga tgttaaaccg caaacaaaac aggaagaaac tcccgttgaa ataattaatg
      241 acggcacaca ggctgcagat tcatacggac gtattcttgt taaacaggca ggcaaagttg
      301 ataaccctga aatggttaaa tcaatcaaag atgctgttga tttttacatc aacaaccaac
      361 atcttgttgc ggcaggtgta aaagcaggtg atgatgcata tgaattgttc catgctgatg
      421 aaatgccaaa tgcttatgaa aaagcttgct gcggctcttg cgatgctgtt tataaaaaag
      481 ccggaaaaaa ttaattttat taaacaaata gtttgttttt ctctgttata gtataattcc
      541 gttatgaaag ataacgaaaa tttgctgtca ttaaaaaata tttccattgt ttataatgaa
      601 gatgtagctg aatctttaaa ggttgcgcaa tacacaaaag aaattttgac tgcacgtggc
      661 ctaaagactc aaatcaattc ttcaacaaat ttcaatccgg actcgtcact ggttataaca
      721 gtaggaggag acggaactct gcttaaggca gcacgatatt atgcaccaat taatgtaccg
      781 ttgctgggta taaatcttgg cagacttggt tttcttgcgc aggccaatcc ggatgaaatt
      841 gaggcatctg tagataagct gttaaatggg gaatactctt tacaaaacag gatgatgctg
      901 tcagtttttg atgacaattt gcttgcatta aacgatatag ttataaaggg tgacagtttt
      961 tcaaggacat caaagctgtt tttatccatc aacaacaaag tggtatgtga ttatcttgca
     1021 gatggaataa taatagcaac accgaccggt tctacagcat atactctttc agcaggcggg
     1081 cctgttatgg cgccagagct tgaggctgtt gtgattgtac cgatttgtcc tcacacttta
     1141 acagccaggc cgcttgtgat tccggcaaat gaaactataa aaatttccag ctgtaaaacc
     1201 tgtaacaaac taaaattatc cgcagacggt caggatacaa ttgatattaa ttcacaagac
     1261 agcattgtta tcaaaaaaag ctctgtgaga gcaaaacttg ttattctgga aaaagaaaac
     1321 aatgagtttt attctatttt aagaaaaaaa ctcaaatggg gagtgtcacc ggaacgttag
     1381 tatgattaag tcattaaaaa taaaagattt tataattatt gatgagcttg aacttgagtt
     1441 tgacaaaggt tttaatgtca taaccggcga aacaggtgca ggcaaaagta taatgattaa
     1501 tgcaattgac cttgcattcg gtgcgcgtgc taacaaagag cttatcaaaa caggcaaaac
     1561 acgtgccgct atagagttaa cactcgattt aaaagagaat ctctcgcaaa gttttcttga
     1621 agaatacggg cttgaggatt atggcaaaga gcttataata tcaagagaaa ttacagagtc
     1681 aggctcacgt tcgcgtgtaa acggagcact ggtaacacag gatgtaataa aacttttgag
     1741 agaaatgttg attgacatcc ataaccagca catgacatac acatatattc aacccaagta
     1801 tcatataaac cttctggatt cttacggtga cgacaggcat ggagtgctgc tgaacgaata
     1861 taaagcaata tacagcgaaa tgaaaagtgc cctcaaacag ctggaagagg caaaaaacaa
     1921 aacacagcta acacaacaac aaatagactt tttaaaattt caaattgatg aaatagcagc
     1981 tgcaaacata gatgacgtcg aagaagacaa aaaacttgaa gaagaactaa gtgttttaac
     2041 aaactttgaa aagctaaaag agcttacata ttcgagctat tggagcttat atggcgaaga
     2101 cggatgtatt cttgatgcac ttggaaaagt aaaatcaaat attacaaaag ctacggagat
     2161 ggactcaagc cttcaggagg ttgagtctga aataataaat gcacaggaag ctcttcgaga
     2221 gctgtcatct tctttgagaa gttacgcaga atcaatggag cttgatgaac agagacttaa
     2281 tgaaatacaa gagcggttag acaatcttga taaaataaaa aagaaatacg gcacaacact
     2341 tgagctggta cttgaaaact acaccaaatt tgaacaggaa tataactcaa tagaatttgc
     2401 gcaagatgaa acgcaaaggc tggaaaagct ttatgaagaa aaactaaacc tggcagcaca
     2461 aaaagctcaa gagttgtcta catccagaaa acagatgtct caaacacttg cagacaccat
     2521 aaaaaaagag cttgaaaaac tcgacatgcc aaaagttaaa tttgaaattg atattaaaaa
     2581 ttccgatgaa cttttgcaaa caggaaaaga tattgttgag tttttgatat caacaaatat
     2641 ttcagaatca ccaaaacctc tggccaaaat tgcatcaggt ggtgaaattt cacgtgtaat
     2701 gctcgcatta aaaacaatct ttgcaaaatc agataacata aatactgtta tttttgatga
     2761 aattgataca ggaatttccg gcaatgcttg tcaggctgtt gcgcagacaa taaaagagct
     2821 tgctaaaaca catcagatta tttctatcac acaccagcct atcattgcag caaaatcaga
     2881 ttgccacttt tatgttgcca aaacacagga agaaaagaca aatgtcaaag tttatactct
     2941 tgatacaaac aataaagtaa aagcaattgc aatgcttgca gcaggcgaaa ttacagatga
     3001 ttcaatcaat tttgcaaaac aattgataaa ttcttaaata catgcactca aaaagttgta
     3061 taataagata tgctaataca atacattgcg caatatcttg aatatttaca ggcagaaaga
     3121 ggccttgccc taaatacnnt acaatcgatg cttacagacg tgatttaacg gcattttgtg
     3181 attttttgct cgatactgaa aaaatagatg agtttgaaaa gataaaaaga attcatataa
     3241 actgctacat aaaaatactg cacgacaata attacagccc taccagtgtt acaagaaaaa
     3301 ttgcttcaat aagaggatgg ttcagatggc tcagtgcaaa tgaaattatc tcacaagatc
     3361 ccagtcttgg tatagagttg ccaagattga ccaaaaagct tcccagagtg atctcagtct
     3421 cagagataga agaaatgttg aataacaaac tggatgaaac acaacaggta ataatagagc
     3481 ttctatatgg agcaggccta agagtgtccg agcttatcgg actggagtta aacaatattg
     3541 aattatcatc cagatatgta agatgcatag gcaaaggctc aaaagaaaga attattccta
     3601 taggagaaaa agcgcaaaaa gctattgcag gatatcttaa aataagacaa cttttaataa
     3661 aaaaatacaa gcttgagaca aaacaatttt taataaaaga aaacggacat ttgatgacac
     3721 gacaggatgt ttatgttttt attaaacagc agggggaatt attaagaaaa cacatttctc
     3781 cgcacacatt aagacatagc tttgcaactc atatgttaga aaacggagca gacttaagag
     3841 ttgttcagga attgctgggg cacagtgatg tttctaccac tcaattgtat actcacgtaa
     3901 gcaaaaaacg acttaaagaa gtttattttt caattaataa ataggaaccg gaagtgaatt
     3961 taaaagagat ttatacaaca aaaaaacaag agcctgttat atcatacgag gtctttccgc
     4021 ccaaagacga tattgatgca acaaaattgg aaaaattatt cgatgaatta aaaaagcttc
     4081 tggtatttaa tccttctctt atttccgtaa cctacggagc aggcggctct aatcaaaacg
     4141 agtcagttga aattatcaaa agaatcaaac aggaactcaa tgtcagccca atgccgcatt
     4201 ttacctgtgt atcaacaagt actgaaaata taaaaaatta tttaaaaact cttaa
//
LOCUS       DABS01000079            2637 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15463, whole genome shotgun sequence.
ACCESSION   DABS01000079 DABS01000000
VERSION     DABS01000079.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(69..142)
                     /locus_tag="CPT85_03080"
     tRNA            complement(69..142)
                     /locus_tag="CPT85_03080"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(106..108),aa:Arg,seq:cct)
     gene            306..1112
                     /locus_tag="CPT85_03085"
                     /pseudo
     CDS             306..1112
                     /locus_tag="CPT85_03085"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1078..1091
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1356..>2637)
                     /locus_tag="CPT85_03090"
     CDS             complement(1356..>2637)
                     /locus_tag="CPT85_03090"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24674.1"
                     /translation="NDSTLDLNLKGGGNSLCIDVDPANLIADYINMTGSPDDMTMITI
                     RDINVISDPLQSVTIFDIFDHDKFGTDLALSQELQNSIVYGGLKTYKWALTPKLTLIE
                     LGGLNPNIQRYQGATAAAFMNQMLSYDYSLNRTDEIYTNLREQKLASRKLNSYASNGP
                     TGLYVDNYYEDGSAMWIRPYVNLETFNLSGASGGLNNQSYGFMIGFDFPMHETRNDWK
                     LFPTIYASYLGSSQQYLDSHMNQNGGYGGFLLSAFKDDFYAGWTINGGGLGVTSRYAS
                     GHDDYAIITAGTALKLAYNWKIRNRFFVQPNVTTAYTFLSPSNLVNFQSVDMDQSQVN
                     GLTVAPSLRLTYRNETGFEPYIYGGCVIPIMSDIKATGNGLNLETLTLNTWAQFGAGV
                     RKRVSERITCFLETIIRTGGRDGWGLMFNIQIAI"
BASE COUNT          900 a          483 c          465 g          775 t
ORIGIN      
        1 agagatgtaa agcatacgca attatgctaa aatgcaagat cacgctattt aattgaatgg
       61 cataaaaata ccccggattg gactcgaacc aacgacgcac agcttaggac gctatcgctc
      121 tatccaactg agctaccggg gcgaaaataa ttaattatta tacttttatt ctataacaat
      181 aaatctaatt taaaaagtat ttgtcaaaat aaaaattata ctttcgaaga ataattttac
      241 tattttgttt tgatactatt cagatataaa taaaaataaa aacatagatt taggaaagta
      301 aggtaatggc aatttgcaca aaaattaata atactatttg tatgaaaaga atatttgcta
      361 ttttaatgtt aactttattg ggtacacaag ctattgcagc gccatgtcag gttgcgcaat
      421 gccaagaaca ggtgctgtgt gaacaatata tgtttccgga aaaaaatgca ccttgcaata
      481 aggtcattat cacaaacctg agaaatattt tgtgcaaagg taatgttttt actgtagtat
      541 ttaactgcaa attctggtca gacaaacaaa aagctggtga cagggtgaat tttagtgttc
      601 ctgaagccat ttacacacag gaaggtacat tgctcatacc tgcttgttca aaactcgttg
      661 ctactgtaat aaaaattgaa aaacaacgca aattcaataa gaatgcaagg gtacatttaa
      721 aatttgaatg ccttgtgctg ccagatggca cagttacagc gatgtcagcc aaaccattca
      781 ctaaagacgg cactctaaaa gaaggcccct ggatgactgc tggaaagctt actgcttcaa
      841 cattaggcct aggcatagcg ggtgcaggag ccggtgtagg ttttgccttt attccaaatc
      901 cagcaaagat tggcactggt cttgctattg gaataccaat tggctgcact gtcggtttga
      961 taacaggact tgttacacct ggattaaaat atcatgcaaa agcaggagaa gccataaaaa
     1021 ttatactgtg cgatgattta tgcataaaaa agacagattg tctaaaaact caacaacnnn
     1081 nnnnnnnnnn ntataaaaga aagattctct aaaaagggaa tcttttgtat ttacagcatt
     1141 gctataataa ctttgtcaat aaaaagacgc agccaagcta aatatatgga ggtattatgg
     1201 aaaaagataa taaaaaacac aacacaaaca ctgcaactaa aaagccaaca acaaaagaaa
     1261 acaaaacaga taacaaaaaa atgtctcacc cttcagacaa aaaagataag aaataagaga
     1321 gaaggcagca tatttgctgc cttcttgcta ctaacttaga tagcaatttg aatgttaaac
     1381 attaaacccc aaccgtctct tccacctgta cgaattattg tctctaaaaa acaggttata
     1441 cgctcgctta ctctttttct tacacctgca ccaaattgcg cccaggtatt caaagttaga
     1501 gtttcgagat ttagaccatt tccggtagct tttatatcac tcataatcgg tattacgcaa
     1561 cctccataaa tatatggctc aaatcctgtt tcatttctgt atgtaagccg caacgaagga
     1621 gcaacagtta aaccatttac ttgagattga tccatatcaa cactctgaaa atttacgaga
     1681 tttgatgggc ttaaaaaagt ataagctgta gtgacattag gctgcacaaa aaatctattg
     1741 cgtattttcc agttgtacgc aagttttaaa gctgtaccgg ctgtaattat tgcatagtca
     1801 tcgtgccctg atgcatatct ggaagtaaca cccaggccac ctccatttat agtccaaccg
     1861 gcatagaagt catctttaaa ggcgctaagc aaaaaaccac cgtaacctcc gttttgattc
     1921 atgtgagaat ccagatactg ttggcttgag ccaaggtaag aggcgtaaat tgtggggaaa
     1981 agcttccagt cattccttgt ttcgtgcata ggaaaatcaa agccaatcat aaatccgtat
     2041 gattggttat ttaaaccacc tgatgcacct gataaattaa aggtttccag gtttacatat
     2101 ggtcttatcc acattgcaga accatcttcg taataattat ctacatacaa gccggtcggg
     2161 ccgtttgaag cataggagtt taattttctt gaggctaact tttgctctct aagatttgtg
     2221 tatatctcat cagttctatt taaagaataa tcatagctca gcatttgatt cataaatgca
     2281 gccgcggttg caccctggta tctttgtata ttggggttta aaccgcctaa ttctattaac
     2341 gttaattttg gtgtcagagc ccatttgtag gttttgagac caccatatac tatagagttt
     2401 tgtaattctt gagatagagc aaggtctgta ccaaatttgt catgatcaaa tatatcaaag
     2461 attgtaacag actggagagg atcacttatg acgtttatat ctcttatagt aatcattgtc
     2521 atatcatcag gactgccggt catattgata tagtctgcaa ttaaatttgc cggatcaaca
     2581 tcaatgcata aagaattgcc tccacctttt aaattaagat ctaatgttga atcattt
//
LOCUS       DABS01000080            5144 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_27000, whole genome shotgun sequence.
ACCESSION   DABS01000080 DABS01000000
VERSION     DABS01000080.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5144)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5144)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5144
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..1652)
                     /locus_tag="CPT85_03095"
     CDS             complement(<1..1652)
                     /locus_tag="CPT85_03095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00757"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="DAB24638.1"
                     /translation="MAKSIVIAERDNIAAVFEDNKVTEFFIHRGDILLGDVYLSKVEN
                     ILPSIEAAFVNVGSDKMGFLHAADVIGKGGLQDKLSPKQKLVVQVVKEPTGHKGPRVT
                     TSLSLPGRFCVLMPQESGISVSKKIMSAKERARLKSIVSLLKPVGLGVIIRTEAEGQT
                     EAEIQEDLEILLEKWNTIVTQAELVDAPNLLYRDQDLLYRVIREACTEDVKEIVVDTP
                     YAMHRTQQLIQNWNLNKNIDISVYKGSEPLLVASGVKKEIEQALQIKVNLPSGGYLFI
                     QTTEALTVIDVNSGKFISSATQDETILKTNKEAVKEIARQLKLRNIGGMIIIDFIDML
                     SRADKIAILEELEMAVESDKSKPQVGQLSDLGLVEMTRHRQGQSLAEIFTKKCSHCNG
                     TGQILEDFGFASSLAEGEMRSKAAKLKLPMNGKNKHNNEKHNKVFNHQNTQNNQKNDY
                     DRRNHAKQDDTNQENNVENQDLQQPQEQQRRDNRNKRFNKNKKYNNQRRDEQKDSMLQ
                     QENTEIVAIDTQVVTVQDTPVVEPEEIKEVVNPIEAAETVED"
     gene            complement(1703..>2375)
                     /locus_tag="CPT85_03100"
     CDS             complement(1703..>2375)
                     /locus_tag="CPT85_03100"
                     /inference="COORDINATES: protein motif:HMM:TIGR03936"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24639.1"
                     /translation="YSKTPVKKYRAKVTKKGYLKFLSHLDWQNTLVKGLFRSGLPVVF
                     TEGFNPIPKISLGAALPIFIESETEFIDFELYGEDDLEKIKQTLNKSFDPMAQIINIY
                     EIDKTAKSLDITTQWARYEISALEKNVSNFENLMYIKDKLTSQDEIFLKKKTKKGIDK
                     LINIKQSVKDVELKNNKLYVTLKTGQNQDIPSVRADDLMKIFYPDEKFNITRLALFDA
                     DFRVL"
     assembly_gap    2376..2435
                     /estimated_length=60
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2436..2657)
                     /locus_tag="CPT85_03105"
                     /pseudo
     CDS             complement(2436..2657)
                     /locus_tag="CPT85_03105"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     stop; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2603..4183)
                     /locus_tag="CPT85_03110"
                     /pseudo
     CDS             complement(2603..4183)
                     /locus_tag="CPT85_03110"
                     /inference="COORDINATES: protein motif:HMM:TIGR03960"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing radical SAM
                     protein"
     assembly_gap    2629..2641
                     /estimated_length=13
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4187..4531)
                     /locus_tag="CPT85_03115"
     CDS             complement(4187..4531)
                     /locus_tag="CPT85_03115"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24640.1"
                     /translation="MSEEISKKVINIFSKHIKNKPVDTKEKVKTFAGFSYVRMDKDVN
                     GYPFKEAKLLDYAKECHYIVKVMRDKNGSPSLYSYNVPNDKLLDFLLKFRNNELNGTI
                     IEIDKFLPKSII"
     assembly_gap    4644..4698
                     /estimated_length=55
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4699..4915
                     /locus_tag="CPT85_03120"
                     /pseudo
     CDS             4699..4915
                     /locus_tag="CPT85_03120"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     start; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4863..5144
                     /locus_tag="CPT85_03125"
                     /pseudo
     CDS             4863..5144
                     /locus_tag="CPT85_03125"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     stop; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    4881..4911
                     /estimated_length=31
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1434 a          915 c          823 g         1813 t
ORIGIN      
        1 ttatcttcta ccgtttccgc agcttctatt ggattgacta cttctttgat ttcttcaggc
       61 tcaacaacag gtgtatcctg tactgtaaca acttgtgtat ctatggcaac aatttctgtg
      121 ttttcttgtt gcagcataga gtctttttgt tcgtctcttc tttgattatt atacttttta
      181 tttttattga atcgtttgtt tctgttatca cgtctttgtt gttcttgcgg ctgctgtaaa
      241 tcctgatttt ctacattatt ttcttgatta gtatcatcct gtttcgcgtg gtttcgtctg
      301 tcgtaatcat ttttttgatt gttttgtgta ttttgatggt taaatacttt attgtgtttt
      361 tcattattat gcttgttttt accattcata ggtaatttaa gttttgctgc ttttgagcgc
      421 atttcacctt ctgcaagaga agatgcaaat ccaaagtctt ctaaaatttg tcctgtacca
      481 ttacagtgag aacatttctt tgtaaagatt tctgcaaggc tttggccctg tctgtggcgc
      541 gtcatttcaa ctaagccaag atctgaaagt tgaccgacct gtggttttga tttatcggat
      601 tccacagcca tttcaagctc ttcgagtatg gcgattttat cagcacggct tagcatatca
      661 ataaagtcaa tgataatcat tccgccaata ttacgcaatt tcagctgtct ggcaatttct
      721 tttaccgctt ccttatttgt ttttaagatt gtttcatcct gtgttgcaga gctaataaat
      781 ttaccactgt taacatcaat aacggttaaa gcttctgttg tttgtataaa caagtatccg
      841 ccggaaggaa ggttaacttt gatttgcagc gcctgttcaa tttctttttt tacaccggaa
      901 gcaacaagca atggttcact gcctttgtat acagaaatat ctatattttt gtttaagttc
      961 cagttttgaa ttaattgttg tgttctgtgc attgcataag gagtatcaac cacaatttcc
     1021 ttaacatctt ctgtacaagc ttctctgata actctgtaga gtaaatcttg atctctgtat
     1081 aaaaggttcg gtgcatcaac aagttctgct tgagtaacaa tagtattcca tttttcaagc
     1141 aggatttcta aatcttcttg tatttctgct tcagtttggc cttcagcttc tgttctaatt
     1201 attacaccga gtccgacagg ttttagcagg ctgacaatag atttgagtct tgctctttct
     1261 tttgccgaca tgattttttt acttacactg ataccggact cttgcggcat tagcacacaa
     1321 aatctaccgg gtaaactcaa tgatgttgta actcttggcc ctttgtgtcc tgtgggctct
     1381 ttcacaacct gtacaacaag cttttgtttg ggtgaaagtt tatcttgtaa acctcctttg
     1441 ccaataacat ctgctgcgtg caagaagccc attttatcag aacctacatt tacaaaagca
     1501 gcttctatac tgggaaggat gttttctact ttactcaaat aaacatctcc aaggaggata
     1561 tcacctctgt gtataaaaaa ctcggtaact ttattgtctt cgaacactgc tgctatattg
     1621 tcgcgttctg caataacgat tgattttgcc atattaactt cctttaaact tgtataaact
     1681 tttataattt tacgcggcag gactataaaa ctctaaaatc tgcgtcaaaa agtgcaagcc
     1741 ttgtaatatt aaacttttcg tcgggataga aaattttcat taagtcatca gcacgtacag
     1801 acgggatatc ctgattttgg cccgttttta aagttacata cagtttatta tttttgagtt
     1861 caacatcttt tactgattgt ttaatgttta ttaatttgtc tatacctttt tttgtcttct
     1921 tctttaagaa tatttcgtct tgtgaagtaa gcttatcttt aatatacatt aaattttcaa
     1981 aatttgaaac atttttttcc aaagctgata tttcatacct ggcccattgg gttgtaatat
     2041 caagagactt agctgttttg tcgatttcat atatattaat aatttgtgcc atagggtcaa
     2101 aagatttgtt taaagtttgc tttatttttt ccaaatcgtc ttcaccgtaa agctcaaaat
     2161 caataaactc tgtttcactc tcaataaaaa taggcaaagc cgcaccgagc gaaatctttg
     2221 gtatcgggtt aaaaccttct gtaaaaacaa caggcaatcc gcttctaaaa agacctttta
     2281 caagggtatt ttgccagtcc aaatgtgata aaaactttaa atatcccttt tttgttactt
     2341 ttgccctgta tttttttaca ggagtctttg aataannnnn nnnnnnnnnn nnnnnnnnnn
     2401 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnctccg gacaaatacc gcaatttgag
     2461 cattttgttt cacaaggttc gctggatttg ctattaagag ctttttggta ttcttcaata
     2521 aaccattctt tttttatacc aacgtttata aagtcccatg gaagctcttc atcaagacta
     2581 aattgttttt gtgatagttc acctacacta aaaccgcatt tttgtgcann nnnnnnnnnn
     2641 nggtatcgag ataacaacct gcattgtaga gctcttcaat ataaccgcat aaagagccgt
     2701 cccctctagt gagtacagct tctatttcag atatatattt ttcatgaatt ttaattcgta
     2761 cgctttttaa agattttgat ttttctctaa tataagcaat tttttgagtt attacatcaa
     2821 gagaatcctg tcctacccat tggaaaggtg taaacggttt tggcacaaag attgaaaggg
     2881 tacagttaag ctttaagtcc tgctttagtc caagttcatt tttaatttgc tttgcacgat
     2941 acctgattcc gctcaaaagc gctatcattt catcaatatc ttcataggtc tctgttggca
     3001 agcctagaat aaagtagtat ttgatgctgt catatccgtt tttataacaa tcaagggttg
     3061 tgttgatgat ttgttctttc gaaatattct tgttaataac atctctaaga cgctgagagc
     3121 ctgcctcagg agccagggta atcgtagttt ttctaacatc tttaacaagg tttgacagcc
     3181 ttatattaaa gcggtctatt ctctggctag gcaatgatgc agacactttt ttatcactaa
     3241 aataacaggt tagctcctcc aatacaggtt ctatgtttgt atagtcattg gaagataacg
     3301 ataacattga aaattcatca tatcctgtat ttttcacaag attcttggtt atttctataa
     3361 tatcttcggc ttttctttct cgtataggta aatttacatg gcccggctgg caaaaacgac
     3421 acattctgcc gcacccgcgt cttatctcag taaccgccct atcatgaatt gatgttgaaa
     3481 atggcacagg atgttttctg ggtacggaat cagaagaaaa gtcatagatt cttttgttta
     3541 tttttttgcc tttgtgctgt gacggaacat ataatccgtc aatttcggca agaagtgcaa
     3601 taatttgttt tcttgtttta ccctgctttt tagcaagttt ataggtttct acaacttctt
     3661 ttaaaatatc ttccccatcg cctatcaaaa atccgtcgat aaactctctc attggctctg
     3721 gattaaaagc acatggacca cctgataaaa taatagggtc atcttctgta cggtctgcat
     3781 ttttgacagg aatgtcagcc atgttcatca ttgctagcac agtagggtaa gccagttcgt
     3841 attgcagaga aaaacccaac aagtcgaaat cttttagtct gacttttgat tccacggcat
     3901 aaagatataa atcctgcttt tcaatttcta ctttgcaatc tgtatcagga gcatatgctc
     3961 tgtcacacat acagccgtct atagaattga gggtttcata aataattctg tgaccaagat
     4021 tgcttgcgcc aacctcgtac ttgtccggaa atgctattgc aaagcgtact tcagaggttt
     4081 caaaatcttt attataagaa tatagctcat gtcctgcata ttgataaggc ttgttgacgc
     4141 tgtacaaaag cctgttgaga gtttgattat ctaacttttt catatcttaa attatacttt
     4201 tcggcaaaaa tttatctatt tcaattattg ttccatttag ttcattattt ctgaacttaa
     4261 gcagaaaatc aagcagtttg tcgttgggca cattgtagct gtacaaagat ggtgagccgt
     4321 ttttgtctct cattacctta actatgtagt ggcattcctt ggcataatcc agcagttttg
     4381 cttctttaaa cggatagccg ttaacatctt tatccatacg aacatagcta aacccagcaa
     4441 aggtttttac cttttctttt gtgtcaacgg gtttgttttt aatatgtttg ctgaaaatat
     4501 ttattacttt tttactaatt tcttctgaca taactcaatt aaatagcaat ttgcgacata
     4561 agtctaacat tttacaaaga agtaacattg taaaactttg taaacaattt taatatttcc
     4621 taaagaaaaa aaaaaaatga cgannnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     4681 nnnnnnnnnn nnnnnnnnca ctaagtccgt tttaagagct gaaacgataa aatcacaaga
     4741 tgtagtaaat gatgctaata atgaaacaga aacacttgga ctaaaattca ccccgaatta
     4801 catgccatat gaagaaaaaa aaccgtatta cgaaacagga ctgaagaaat ttattgaaaa
     4861 cagtgaactt aacagtttgg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn natgattgcc
     4921 atgaagatgt cgatttacca caagacagtg acaatacgag cagagaatct gaattaaagc
     4981 aaattttaac ttcactcggc aaagatattg atgaatcata ttcaaaaagt tataaaaaag
     5041 aaaatgaaca aacatttaca gagggagaaa ttttatacaa tatatcttca atgttaaatt
     5101 ctgataataa agaaatagcg gctattggta aggttttgtc tgat
//
LOCUS       DABS01000081            4326 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15333, whole genome shotgun sequence.
ACCESSION   DABS01000081 DABS01000000
VERSION     DABS01000081.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4326)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4326)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4326
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..333)
                     /locus_tag="CPT85_03130"
     CDS             complement(<1..333)
                     /locus_tag="CPT85_03130"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24634.1"
                     /translation="MNLKALGRCIDQPVILNKLQKKMPVLLIGAGGGYGVLDTYMSTR
                     GKSKEQKKTKAVKNSIIISSTIAASLIGANGLKIAGKQIVPRLLEKSSLTEILENNKK
                     AVDKYIKDS"
     gene            774..2528
                     /locus_tag="CPT85_03135"
     CDS             774..2528
                     /locus_tag="CPT85_03135"
                     /inference="COORDINATES: protein motif:HMM:PRK01611.2-2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="DAB24635.1"
                     /translation="MLKQYIIDVTTQAINAAVKNGKLNQMKQEDVFTLNAETPKNEEF
                     GDFAVNVSSLARYSKMAPPAIAQAVSEFIDVEDCQVNTVAGFINFKLGNSFLNTIVKD
                     IINLKHDYGSNNYGDGQKVILEYVSANPTGPFHIGHGRWAAMGSALANLLKFAGYEVY
                     QEFYINDAGNQIKNLGRSLHIRVLQEMGQDIDFPHDETERKSYYPGEYLVPIAKEFVK
                     ANPDCAKALTKDLTQEQLETLSSFAKARMLELQKELLNKFNTHFDNFYSETELHKSGK
                     VEECVEKLKQKGMLYEKDGALWFKSSLFGDDQDRVLRKTDGSNTYLTADIAYHHDKIK
                     RGFDKLINIWGADHHGYVPRMKASIEAXGDDPEKLEVLLGQLVNIVLDGEAVRMGKRK
                     NMVTLEDLIDEVGVDATRYWMIIRSIDTTLDFDIELAKSKTDENPVFYVQYAHARACS
                     IFRNAKNERLNVETKEKIAPLFEDKELDEAIMNANLGLLWSTEDEKSIASAKKLILKL
                     EEFKPIILMAARNRAPYLICKYLQELAGCFHQFYTFSRVLTDNKELSAARLALVKSVS
                     TVIKTSLDLLAVQAPERM"
     assembly_gap    1857..1858
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2602..2961)
                     /locus_tag="CPT85_03140"
     CDS             complement(2602..2961)
                     /locus_tag="CPT85_03140"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24636.1"
                     /translation="MSLRDRLKSKKEAKTAAERGEFRISIAKVTHAVNKMKNPADLGN
                     IVKEFAKFLNTLEANDAQITFSGNFDLGQKTLLNCILGNFLDDGSDKRIKNCTAEEDT
                     DTNKPASKLIRNXKENP"
     assembly_gap    2618..2619
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    3116..3133
                     /estimated_length=18
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<3134..4000)
                     /locus_tag="CPT85_03145"
     CDS             complement(<3134..4000)
                     /locus_tag="CPT85_03145"
                     /inference="COORDINATES: protein motif:HMM:PF01656.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24637.1"
                     /translation="MRKAGKCIAFIDISENFEKALNLIKKLKDLNKEAHVVALSNKTS
                     TDTIIKVMRAGAKEFVTKPVMESEFKEVINNLTQELNCVEPAQNCKIISTFSNKGGIG
                     KTSIAVNLALELAQMSKEKVALIDLNLQLGDVSTFLDMTPPFAMDYIADNIHNLDEEE
                     LLKTLSKYKNTSLYVIADPLNIDKSQDITAEQIKSILNALKKTFSYIVIDIGTNIDTK
                     TITALDNSDLILLIAIVNLPAIRSTQRCMELFEKLGYPADKIKLVLNRYMENEDIKTS
                     DIEEVVKQKVYWK"
     assembly_gap    4110..4111
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1379 a          747 c          749 g         1427 t
ORIGIN      
        1 tgagtctttt atatatttgt ctacggcttt tttattattt tcaagaattt ctgtcaggga
       61 tgatttttcc aaaagccttg gtactatttg ttttcctgca attttgagac cgtttgcacc
      121 tattaatgat gcagctattg ttgaggaaat gattatggaa tttttaacag cttttgtctt
      181 tttttgttct ttagatttac cgcgtgttga catgtatgta tccaaaaccc cgtaaccgcc
      241 acctgcacct ataagaagaa cgggcatttt tttctgtagt ttatttagaa taacaggctg
      301 gtctatacat ctgcccaggg ctttaaggtt catgagaata tcctttcggt tttaaattgt
      361 tagttatgac taacaatatt caaaaaagtt ttaattgtca agctttctga caaaaaattg
      421 cccgtgcggg cattaacata tctttacagg caaccaatat tattaaagtt tttaataaat
      481 catgccgata tattatttgt tcaataaaac agggatattg tatggacaaa aacgaatttg
      541 atgaaaatca acttaaccac gtaaaaatgc aaagtgacct gataaaactc atccaggtat
      601 tggatgagtg tattgagcac attgacagct tctattgcta cacaatgaaa aagcagatgc
      661 tggccggctc gaatcaaaac taggcaagaa acatataaaa atttaaacct gtgtaaatat
      721 tctttgtttt gactataatc tttgtaagat tagaaatttt gcgaaggtga aaaatgttaa
      781 aacaatatat tattgatgtt acaacacagg caatcaatgc tgctgtaaaa aacggcaagc
      841 ttaaccagat gaaacaagaa gatgttttca cgctaaatgc agaaacacca aaaaatgaag
      901 aattcggtga ttttgcagta aacgtatcgt ctctggcaag atattcaaaa atggctccac
      961 ccgctattgc gcaggctgtt tctgagttta ttgatgttga agattgtcag gttaacactg
     1021 ttgcaggttt tataaatttc aaacttggaa attccttttt aaacacaatt gttaaagaca
     1081 taataaattt gaaacatgac tacggctcaa acaattacgg agacggtcaa aaagttatac
     1141 ttgaatatgt atcagcaaac cccacagggc cttttcacat tggtcacgga cgttgggcag
     1201 ctatgggcag tgcacttgca aatctcttaa aatttgcagg gtatgaagtt tatcaggaat
     1261 tttacattaa cgatgcaggc aatcaaatca agaacctcgg tcgttcgctt cacatcagag
     1321 ttttgcaaga aatgggccaa gatatagatt ttccgcatga tgaaacagaa agaaaatctt
     1381 attatcctgg tgaatacctt gtgcctattg caaaagaatt tgttaaagca aatcctgatt
     1441 gtgcaaaagc attgacaaaa gatttaacac aagaacagct tgagacactt tcatcttttg
     1501 caaaagccag aatgctcgag ctgcaaaaag agctgttaaa caaattcaac acacattttg
     1561 ataattttta ttctgaaaca gagttgcaca aatcaggtaa agtggaagaa tgtgttgaaa
     1621 aacttaaaca aaaaggcatg ctctatgaaa aagacggtgc tctgtggttt aagtcgtctc
     1681 tttttggcga tgatcaagac agagttttaa gaaaaacaga tggttcaaac acttatctta
     1741 cagcagatat agcttatcat cacgacaaaa ttaaacgcgg ttttgacaaa cttataaata
     1801 tttggggtgc tgaccaccat ggctatgttc cgagaatgaa agcatctatt gaggctnncg
     1861 gtgatgaccc tgaaaagctt gaagtgcttt tagggcagct tgtaaatatt gttctggacg
     1921 gtgaggccgt gcgtatgggc aaacgtaaaa acatggttac actggaagac ctgattgatg
     1981 aagttggtgt tgatgcaacc aggtactgga tgattataag aagcattgat acaacactgg
     2041 attttgatat tgagcttgca aaatcaaaaa ctgacgaaaa ccctgttttc tacgtacaat
     2101 acgctcatgc acgtgcttgt tcaatattca gaaacgcaaa aaatgaacgt ttaaatgttg
     2161 aaacaaaaga aaaaattgct ccgctttttg aagacaaaga gctggatgaa gcaataatga
     2221 atgcaaattt agggcttttg tggtcaacag aagatgaaaa atcgattgct tcagcaaaaa
     2281 aactgatttt gaaactcgaa gagtttaaac caataatact gatggcagca agaaacagag
     2341 cgccttatct gatttgcaaa tatcttcagg agcttgcagg ctgtttccac cagttttata
     2401 ccttttcaag agtcctgact gataacaaag agttgtcagc agcaagattg gcacttgtaa
     2461 aatcagtatc aacagtgata aaaacatcac ttgatttact ggcagttcag gcaccggaaa
     2521 gaatgtaaaa aaagaagagt ttttactctt ctttttctga ctcttctgct tcaagagctt
     2581 ctttttcagc caatctttct tttacggatt ttcttttnng tttcttatga gcttggaggc
     2641 aggcttgttt gtgtccgtat cttcttctgc tgtacagttt ttgatacgct tatcagaccc
     2701 gtcatccaaa aagttgccta aaatgcaatt tagcaatgtt ttttgcccga gatcaaaatt
     2761 gccgctaaat gttatttgtg catcattagc ctctaatgta tttaaaaatt ttgcaaactc
     2821 tttaacaata ttgcccagat ccgccgggtt tttcatctta ttcactgcgt gtgttacttt
     2881 tgcaattgat attctgaatt cgcctctttc agctgctgtt tttgcttctt ttttgctttt
     2941 taatctatct cttaatgaca attttcttct ccaactatat attaagttct cttttgttat
     3001 aatttttatt caatttttgt gttatcagat agtctgatat ttttgaggca aaatccttat
     3061 agttaattgc gatgtttgct tcagggttaa tttcactcac cggcacccct ttattnnnnn
     3121 nnnnnnnnnn nnntttccag tacacttttt gtttaacaac ttcttcaata tcagacgttt
     3181 taatatcttc attttccatg tatctgttta gtacaagctt aattttgtca gcagggtagc
     3241 cgagtttttc aaacaattcc atgcatcttt gtgtgcttct gatagcagga aggttaacaa
     3301 tagctatcaa cagaatcaaa tcactgttat caagagctgt gattgttttt gtatcaatat
     3361 ttgtgccaat gtctattact atataagaaa atgttttttt taacgcatta agaatactct
     3421 taatctgctc cgccgtgata tcttgtgact tatcaatatt gagagggtct gcaataacgt
     3481 acaggcttgt atttttatat ttagaaagtg tttttaagag ctcttcttca tccaggttgt
     3541 gaatgttgtc tgctatataa tccattgcaa aaggaggtgt catatcaaga aatgttgata
     3601 catcaccaag ttgtagattc aaatcaatga gagcaacttt ttcttttgac atttgagcca
     3661 attccaaagc cagattaaca gcaatggagg ttttgccgat accgcctttg ttagaaaacg
     3721 ttgaaataat tttacaattc tgcgcaggct ctacacaatt aagctcctga gtaaggttat
     3781 taattacttc tttaaactct gactccataa caggctttgt aacaaactct tttgctccgg
     3841 ccctcataac tttgataatt gtatctgtgg atgttttgtt ggaaagtgca acaacgtgtg
     3901 cttctttatt caaatctttg agttttttta taagatttaa agccttttca aaattttccg
     3961 aaatatcaat aaacgcaatg catttaccag ctttgcgcaa aaaatcaaat ccgagctcaa
     4021 aatcaaaaaa ctctgcacaa atttcaatat tattaaagga agaaagataa tttttaataa
     4081 tgtttcttga attttcttcc ttgtctatcn ntaattacat tcaaattttc actcattatt
     4141 ttacctgtac attataatgt acaaatatta tacagtaaga gcgacaaaat ttaaacgaaa
     4201 atccccaaat atcaattatt tattggaata attatttgac tcaacgcaaa catatacggg
     4261 agctggctca taagccgccg caaaaacacc atcaataata gactcaaaaa acttagaaat
     4321 aacttc
//
LOCUS       DABS01000082           13589 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_14867, whole genome shotgun sequence.
ACCESSION   DABS01000082 DABS01000000
VERSION     DABS01000082.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 13589)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 13589)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13589
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..838)
                     /locus_tag="CPT85_03150"
     CDS             complement(<1..838)
                     /locus_tag="CPT85_03150"
                     /inference="COORDINATES: protein motif:HMM:PF01074.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24611.1"
                     /translation="MKKKVYAYLHTHWDREWYREFEEFKVRLVEVFDDVLNKLEKNEI
                     PSFYFDGQTAALQDYLEIRPEKQDFIKKLIKDKRLFIGPYYCSTDSFLVDSESLIKNL
                     QMGISYSKAFGCHDYIAYHADTFGHSAHIPQIVKYFDINNAIFWRGLGELESEFLFND
                     LKSIYLIEGYFHDYFSAQISYEKKAEFLKRTLDRIAKYSSDNMLLPLGADHLAAPDNI
                     KEQIKEVNKLLDDYEIVLSTPFEYLDKVKGNYKKNITHEFRDTKRNFILPGVYSSRID
                     LKQ"
     gene            942..2714
                     /locus_tag="CPT85_03155"
     CDS             942..2714
                     /locus_tag="CPT85_03155"
                     /inference="COORDINATES: protein motif:HMM:PF13091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24612.1"
                     /translation="MKNLTAAILIILFVLITFLNIEKDNSHEVLKVLSATEFYIDKNN
                     NKTAEVNELVILNLETEPDELGVIQLTQLNYLGKKFAKSVLLNKKVKIQRKLNEDTKI
                     ILPDGKDYEKELIAKGYIFTGTNRSDVNMNLELARKLNLVSYNTRSHKYHKLNCKYAL
                     KSRNIETMELKDVPQKAKPCAQCHLKKSKTVKSSKKNKYPKEIYEKYMPAYKDASIEF
                     YITDFTKYYYPSTKCLTTPCKSLLNEINKATSTIDFAIYGTDKQPEITNALINAQKRG
                     VRVRWVYDTDKKGSTIYSETLQLKNILKNSRRDIDINTQESVQYKDAIMHNKFFIFDN
                     QKIWTGSANITFTDLSSFNANTAILINSKEIAKIYTREFESMYSGRFHQHKTPTPNNL
                     NIIGASKIRVYFSPQDKIITNAIIPLLNDAKRYIYIPVFVITHKEFNQALINAKNRGV
                     EIKIIVDATSAGSTYSSVKNLRANKIPVKAENRAGKMHMKSIIIDDKYVITGSMNFTK
                     SGESYNDENVLVIENPAMAKAFKSKFLYFWQTIPDKWLYKNPGAESFNSINSCFDGID
                     NDFDGKIDMLDDSCNYKLRKESKT"
     gene            complement(2711..3538)
                     /locus_tag="CPT85_03160"
     CDS             complement(2711..3538)
                     /locus_tag="CPT85_03160"
                     /inference="COORDINATES: protein motif:HMM:PF03692.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24613.1"
                     /translation="MVWIIVVFFSLLFSFYYPLPIDLILYQFSLLCYIVDVNTLQNEI
                     INTRKIYRELFNNAHSAIERQIDSLKKASLCNHCKQGCDIDFNKITVLQKFPGGCRYK
                     FWQESVLNLLENQISKDIYERIQIIEKRRQTYSCACCSSCCKLASSEYSFEELKQRAK
                     NGDVFSKEFISVFVPYDSVDTAQKLYPDYVKLLREHFKDNELYFYYCPKLGSNGLCTD
                     YENRPNICRDFPNNPLVALPLKCSYNEWKQEVEITALTLHALIDIIGYYKQKINEVL"
     gene            3508..5292
                     /locus_tag="CPT85_03165"
     CDS             3508..5292
                     /locus_tag="CPT85_03165"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24614.1"
                     /translation="MKRIQQLSRQLINQIAAGEVIERPASVVKELVENSIDAGATRIE
                     IEVSKDCLSLRVADNGAGIHPDDIELAFSKHATSKISTADDLFDIHTMGFRGEALASI
                     ISIAKVVCTTRTKDFETGTRVECEESNVKSSPAACAIGTTMEVNDLFYNTPVRQKFLK
                     SEKVELSYISEALQSIAIAHPEIAITLIYDGKTPVKTSGSGDLLCVLTEIYSNSIAGE
                     LKKINKQDELSHLHATGFCSTPDFTRSSKKSVYVFVNNRVVKCPVILKAIDTAYKNML
                     PAGKYPFVCLNLSIPAKDVDVNVHPTKKEVRYQNPNQIFNFIYSSILGALADIKVPQK
                     EEPDIVIPFGNYNTLQTTTQDGVSQDKEDDDTVYVSSQKFEEIQETNTPPASRQFELN
                     IKQIDLDIPKIAQVEETFNIIGQYQNTYIIFEEDTELKIVDQHIADERYIFEKLQANL
                     KKEDIHSQLLLISDVLQLEAADIELIQENSEKLKHFGYEIQKVSDTEIIFKKVPQVIS
                     HIKVKDILSDILENLHGDLNNLEEKMLVTMSCKAAVKAGTELNHWQMEELIKKWKTTK
                     LPYTCPHGRPIVHSFSEKEIASFFHRNV"
     gene            5304..6269
                     /locus_tag="CPT85_03170"
     CDS             5304..6269
                     /locus_tag="CPT85_03170"
                     /inference="COORDINATES: protein motif:HMM:PF01555.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24615.1"
                     /translation="MYYYDSYSLTFFYTLVIEIKKRDIILAVKKSNLKTKTKVTQTPD
                     LKVVTKPKTLTKPYNDIDLNNWKDYSHVLTDTLWEFNSREKGNGHSYDYHGNYIPQIA
                     QQLYERYTKKGDIVLDLFFGSGTSGIEAVNMGRRCIGVELKQEMVDYVSEKFDNKTLV
                     TDVNIICGDSASSDIGYKIQDRLEVMGREKAQFLVLHPPYDDIIKFSDKKEDLSNCET
                     TEEFYDLFEEVARNGYDKLEKGRFAALIIGDKYAKGQYYPLSFGCMERMNRAGFITKA
                     IIVKNIEGNEKAKGKQANLWRYRALYGGFYIFKHEYIMIFQKPNK"
     gene            complement(6300..7295)
                     /locus_tag="CPT85_03175"
     CDS             complement(6300..7295)
                     /locus_tag="CPT85_03175"
                     /EC_number="1.1.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013278986.1"
                     /note="catalyzes the formation of 2-oxoglutarate from
                     isocitrate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate dehydrogenase"
                     /protein_id="DAB24616.1"
                     /translation="MKKVTLIPGDGIGPEISEAVLKIIKAAGVEIDWDVQSAGADVAQ
                     TEGTPLPQRVIDSIRKNKVALKAPVTTPIGKGFRSVNVALRKELDLYANIRPCKNIEG
                     IKTPFDNVDLVVVRENTEDLYAGIERQIDEDTAESIKIITRKASTRIAKYAFDYAVKY
                     GRKTVWAVIKANICKLSDGLFLNCAREVAKDYPQIEFKEILVDNLCMQLVQNPQKFDV
                     LVLPNLYGDIVSDLTAGLIGGLGVAQGANIGADCAVFEPVHGSAPDIKGQDKANPTAL
                     LICAINMLKYINEDAAAQKIEKALYKVLAENKNLTCDLGGSASTSQFTQEIINNL"
     gene            complement(7292..7822)
                     /locus_tag="CPT85_03180"
     CDS             complement(7292..7822)
                     /locus_tag="CPT85_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014957719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24617.1"
                     /translation="MFIFDYIRLFKLITDTEAQNEAAGFLIDNNKTLAVAESCTGGLL
                     SSLMTDVSGSSSYIKANFVTYANEAKMKYLNVKEETLKEHGAVSIETANEMVQGLLNE
                     TGADYAIATTGIAGPTGGSDTKPVGLVYIGIGSKERVHVSKYNVCSKYPRMLIKYLFA
                     KHAVLLLLDFFKGTIK"
     gene            complement(7838..8530)
                     /locus_tag="CPT85_03185"
     CDS             complement(7838..8530)
                     /locus_tag="CPT85_03185"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24618.1"
                     /translation="MKKYMTMGLLFAGLALSMNISANAAISNKTMKADIQAIRIPAGT
                     VLNLELMDPVSTKIDSVGDEFSAMLKEDKLVNGQIALPAGSIIRGTINKITPAKRLSR
                     SAIVYFSFDHVVTPTGRQIPVNAGLYDYKELTLDGGVYQGGNYGYAIQQNWKKSKDIL
                     GSTIQWGKGTGENLQYLCVPVGAVGGVFGGAGYYVGMGVADLFKKGNDVNFAQGKNFA
                     IMLTQPLDIPLH"
     gene            complement(8594..8833)
                     /locus_tag="CPT85_03190"
     CDS             complement(8594..8833)
                     /locus_tag="CPT85_03190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018759476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="DAB24619.1"
                     /translation="MRLDKFLKVSRLIKRRTVANDVSDQGRVFVNDNPAKPSKQLKEG
                     DIIRIEHFNKSVSVKVLKXGNISVQEASSLYEEIK"
     assembly_gap    8645..8646
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8984..9730
                     /locus_tag="CPT85_03195"
     CDS             8984..9730
                     /locus_tag="CPT85_03195"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24620.1"
                     /translation="MTTINNSTAYSPSHNVKNAGVIKYKENPLKGFVKNDKDGQVKRA
                     ALAGSAITTLGYLFAAAKIAKKGSFKVSDMFNVDFKNMFKVMGLATSAVVGGLAGGLI
                     VDDKENRKPKLKEAMHQFLGNVVTPISIVGIAGEAIEKRKFSKSKEIALSGLAAITGV
                     AAGVTGGNWVASKVNEAIYKEKDERKLGVKDFGIHVDDLLTVAALTPIGDSIKGFISK
                     ALPAIFLICGYEAGTKKAHKKPVIENQENN"
     gene            9778..10617
                     /locus_tag="CPT85_03200"
                     /pseudo
     CDS             9778..10617
                     /locus_tag="CPT85_03200"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    10390..10417
                     /estimated_length=28
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(10620..12038)
                     /locus_tag="CPT85_03205"
     CDS             complement(10620..12038)
                     /locus_tag="CPT85_03205"
                     /inference="COORDINATES: protein motif:HMM:PF13502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24621.1"
                     /translation="MTSQNSRAYPITVLYANGIINLTKNKKDIYIRNLNIETKNNANV
                     KMFNVIFKKSVLKKGMFNCKLNVKGNINNPHILGFVSMDNLDMPLFDTTLQDISVKFK
                     DKTVEVRASGMVLASDFVLLSTIKNDFKPPIVIENLELKSQKLNLDTLVDSLTTIPTP
                     NTAVKLVETGKTSVKMPLNVSDFIIKKGSMTAENIVIRDLNATNYEADFVLGKDMILN
                     LNKLGFDVTTGKMTGTAVYNFDNGRIKANVSAYNVDSNKVASSLFGFKDQIFGNANGN
                     IVITTKGSSEEERIKNMFGYVYFEITDGKMPKLGSVEYLLKAGNFIKSGITGVSLNNL
                     LALIAPVKTGYFDSIKGNFALKNGVAQDIEVYSKGDNLNMYINGEFDILQNYANLRVF
                     GRLTKRASNILGPVGNVSFNSLLSSIPGLKMNKNDKSGIIKDINKIPGVELSDQQYRV
                     FTVKIDGDIDKEKYVKNFRWIE"
     gene            complement(12035..12328)
                     /locus_tag="CPT85_03210"
     CDS             complement(12035..12328)
                     /locus_tag="CPT85_03210"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24622.1"
                     /translation="MDKTLKVSGYFTTKFSEYFANKYINSFLTYPIKPKGDITITADI
                     SGNINNLRIRPKMKFAPESDIYYMGANLGDESEEREINADINVTSNNVVXXGL"
     assembly_gap    12044..12047
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    12387..12417
                     /estimated_length=31
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<12418..13545)
                     /locus_tag="CPT85_03215"
     CDS             complement(<12418..13545)
                     /locus_tag="CPT85_03215"
                     /inference="COORDINATES: protein motif:HMM:PF13116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24623.1"
                     /translation="MTDGEVYGQFNYKNTTVSLDGLNTVINGANGALEFKGKDMHFYS
                     TSGFIKNQPVKIDGKANLAGDIDFDVTSPAIDAADLFEILTTSPMLDSKKAMVDPVEA
                     VSGQVSVALKLKGIVKDFSSILGNETLNISGKIDFKNSTGKLKFAPITLQKISGKGEF
                     NDTDWKADLTGFIGSSKVFVNGFCKDGRTDLKANASSVKTDEIIALVSNTDKLPIPKL
                     PLTHSLVTFNAHYKSNTPQVDLNKLSAKGYFHPETRNDDFIISSGNFALNNGNFELKN
                     FNAKLFNSKIYAHAKVQNLFSQNYRADGNLNISNFDVSSLNAMKKMAFLPPNLKKLLI
                     AYENYSGHADVNLNCRNNKLKGKIALKDIKFEHSYFKTPVSV"
BASE COUNT         4706 a         2428 c         2193 g         4197 t
ORIGIN      
        1 gttgttttaa atcaatgcgg gaagaataca cgcccggcag gataaaattt ctttttgtat
       61 ctctaaattc atgcgtaata ttttttttgt aattgccctt tactttatcc aaatattcaa
      121 acggagtgga caaaacaatt tcataatcat caagcagttt attaacctct tttatctgtt
      181 ctttaatatt gtccggtgcc gcaagatggt cagcaccaag cggtaaaagc atattgtcag
      241 agctgtattt tgcaattctg tccagagtac gctttaaaaa ttctgccttc ttttcataag
      301 aaatctgagc gctaaaatag tcatgaaaat atccttcaat cagatagatt gattttaaat
      361 cattaaacaa aaactcagac tcaagctcac ccagcccgcg ccagaaaatt gcattattta
      421 tatcaaaata tttaactatt tgaggtatat gagcactatg gccaaacgta tctgcatggt
      481 atgcaatata gtcatggcag ccaaaagcct ttgaataaga aatacccatc tgtaagtttt
      541 taatcaaaga ctcgctatcc accagaaagc tgtccgtaga acagtaataa ggccctataa
      601 ataatctttt atctttaatc agttttttaa taaaatcctg tttttcagga cgtatttcaa
      661 gataatcctg caaagcagcg gtttgcccgt caaaataaaa agacggaatt tcattttttt
      721 ccagtttatt taaaacatca tcaaagactt cgacaaggcg cactttgaat tcctcaaatt
      781 cgcgatacca ttctctgtcc cagtgtgtat gtagatatgc atatactttc tttttcataa
      841 caaaattgta aattatatct ttcgtgttgc caaaaaatta acctaagtta acctgatgtt
      901 acttatatgt aatttatttg tataattgtt ataatttttt tatgaaaaac ttaactgccg
      961 caatcttaat tatcttattt gtattaatca cctttttaaa catagaaaaa gataattctc
     1021 acgaagtttt aaaggtttta tccgccacag agttttatat agataaaaat aataataaaa
     1081 cagcagaagt aaatgaactc gttattttga atcttgaaac agaaccggat gagctaggtg
     1141 taatacagct cacccagctt aattatcttg gtaaaaagtt tgccaaaagt gtacttctca
     1201 ataaaaaagt taaaattcaa agaaaactga atgaagatac taaaataatc cttccggatg
     1261 gaaaagatta tgaaaaagag ctaattgcca aaggatacat ttttacaggc acaaaccgca
     1321 gtgatgtaaa tatgaatctg gagctggcgc gtaaactcaa ccttgtaagt tacaacaccc
     1381 gctcgcataa ataccacaaa ctaaactgca aatatgcatt gaaatcaaga aatattgaaa
     1441 caatggagct taaagacgta cctcaaaaag ctaagccatg tgcacaatgc catttgaaaa
     1501 aatctaaaac agtaaaatca tcaaagaaaa ataaatatcc caaagaaata tatgaaaaat
     1561 acatgcctgc atacaaagat gcatcaatag aattctatat aacagatttt acaaagtact
     1621 attacccttc aacaaaatgt ttgactacac cttgtaaatc tcttttaaac gaaataaaca
     1681 aagcaacaag cacaatagat tttgcaattt atggaacaga caaacaacca gaaataacaa
     1741 atgctctgat aaacgcacaa aaacgagggg taagagtcag atgggtctat gatacagata
     1801 aaaaaggaag cacaatatat tctgaaacat tacagctcaa aaacatcctg aaaaactcca
     1861 gacgcgatat tgatataaac acacaagaat ccgtacagta taaagatgcc attatgcata
     1921 ataaattctt tatctttgac aatcaaaaaa tatggacagg ctctgcaaac ataactttta
     1981 ctgatttatc aagttttaat gcaaacacag ccatattgat aaactcaaaa gaaattgcaa
     2041 agatttatac aagagaattt gaatcaatgt attcaggacg cttccaccaa cacaaaaccc
     2101 ctacacctaa caaccttaat attatagggg catctaaaat acgtgtttat ttttcaccac
     2161 aggacaaaat tattacaaat gcaataatcc cgcttttaaa tgatgcaaaa aggtacatct
     2221 atataccggt ttttgttata acgcacaaag agtttaatca agcactcatc aatgcaaaaa
     2281 acaggggtgt ggaaataaaa attattgttg atgcaacatc tgcgggctct acatattcat
     2341 ctgttaaaaa tttaagagca aataaaattc cagtaaaagc agaaaacaga gcaggtaaaa
     2401 tgcatatgaa atccataatt attgatgaca aatatgttat tacaggctca atgaatttta
     2461 caaaaagcgg agaaagctat aatgatgaaa acgttttggt aatagaaaac cctgcaatgg
     2521 caaaggcttt taaatccaaa tttctatact tctggcaaac catccctgac aaatggctgt
     2581 acaaaaatcc gggagcagaa tcatttaact cgataaactc atgttttgac gggatagaca
     2641 acgattttga cggaaagata gatatgctcg atgattcttg caactacaaa ctacgtaaag
     2701 aatcaaaaac ttaaagcact tcattaatct tttgtttgta atatcctatt atatcaatta
     2761 acgcatgcaa agtaagtgct gttatttcaa cctcttgctt ccactcattg taagaacact
     2821 ttaaaggcag cgcaacaagt ggattgttag gaaaatccct gcatatattc ggacgatttt
     2881 cataatcagt acacaacccg tttgagccca gttttggaca ataataaaaa tagagctcat
     2941 tatctttgaa atgctctctt aaaagtttaa cataatcagg ataaagcttt tgagctgtat
     3001 caacagaatc ataaggaaca aatacgctta taaattcttt tgaaaaaaca tctccgtttt
     3061 ttgcacgttg tttcagctct tcaaaagaat attccgagct tgcaagtttg cagcatgaag
     3121 aacaacacgc acaggaatat gtctgtcttc gtttttcaat tatttggatt ctttcataaa
     3181 tatcttttga tatttgattt tcaagaaggt ttaaaacaga ttcttgccag aatttgtaac
     3241 gacagccgcc aggaaatttt tgcaaaacag ttattttgtt aaaatcaata tcacacccct
     3301 gtttgcaatg attgcaaaga gaggcttttt taagagaatc aatctgtcgt tcaatagcag
     3361 agtgtgcgtt attaaaaagc tctctgtata tttttcttgt gttaattatt tcgttttgta
     3421 aggtattcac atctacaata tagcacaaca gagaaaattg atataaaatt aaatctatcg
     3481 ggagagggta ataaaaagag aataaaagtg aaaagaatac aacaattatc cagacaattg
     3541 ataaatcaaa tagccgcggg agaggttatt gaaagaccgg cttctgttgt aaaagagctt
     3601 gttgaaaact ctattgacgc aggagcaaca agaatagaaa tagaagtaag caaagactgt
     3661 ctttctttaa gagttgctga taacggcgca ggaatacacc cggatgacat tgagctcgct
     3721 ttttcaaaac atgcaacaag taaaatatcc acagctgacg acctttttga tattcacacc
     3781 atggggttta gaggtgaagc tcttgcaagt attatctcta ttgcaaaagt tgtctgcaca
     3841 acacgcacaa aagattttga aacaggcacc cgtgtagagt gcgaagaatc aaacgtcaaa
     3901 tcctcgcctg cagcatgtgc aataggcaca acaatggaag ttaatgacct tttttacaat
     3961 acacctgtgc gccagaaatt tttaaaatct gaaaaagttg agctttcata tatatcagaa
     4021 gctcttcaaa gcatagctat agctcatccg gaaattgcaa ttacccttat ttatgatggc
     4081 aaaactcctg taaaaacatc gggcagcggt gatttgttgt gtgtattgac agaaatttat
     4141 tcaaattcta ttgcagggga attgaaaaaa attaacaaac aagatgagct atcgcatctg
     4201 catgcaacag gtttttgttc tacaccggac tttacccgtt catcaaaaaa gtctgtttat
     4261 gtatttgtaa acaacagggt tgttaagtgt ccggttattt taaaagcaat tgatacagct
     4321 tacaaaaaca tgcttccggc aggaaagtat ccatttgtat gtttgaatct ttcaatccct
     4381 gcaaaagatg tggacgttaa tgttcacccg acaaaaaaag aagtgagata tcaaaaccca
     4441 aatcagatat ttaactttat ctacagctcc attttaggtg ctctggcaga tattaaagtt
     4501 ccgcaaaaag aagagcctga tattgttatt ccatttggca attacaatac attacaaacc
     4561 acaacacaag atggagtttc tcaagacaaa gaagatgatg acacagttta tgtttcatca
     4621 caaaagtttg aagaaataca agaaacaaac acacccccag cttcaagaca gtttgagctg
     4681 aacataaaac aaattgacct tgatatacca aaaattgcac aggttgaaga gacattcaat
     4741 ataataggac aataccaaaa cacctatatt atctttgaag aagatacaga attaaaaata
     4801 gtagaccagc atattgcaga cgagagatat atttttgaaa aactgcaagc aaatctaaaa
     4861 aaagaagaca tccattccca gcttttgctg atatcagatg ttttacagct ggaagctgct
     4921 gatattgaat tgattcaaga aaacagcgaa aaacttaagc atttcggtta tgaaatacaa
     4981 aaagtcagtg acactgaaat aatcttcaaa aaagtcccac aggtcatatc acacataaaa
     5041 gtaaaagata ttttgtctga tattttagaa aaccttcatg gagatttaaa caatttagaa
     5101 gaaaaaatgc ttgttacaat gtcatgcaag gctgctgtaa aagccggaac agaattgaat
     5161 cactggcaga tggaagaatt aataaaaaaa tggaaaacaa caaaattgcc ctacacctgc
     5221 cctcatggca gaccgattgt gcattctttt tcagaaaaag aaatcgcttc attcttccat
     5281 aggaatgtat agattaaaat ctcatctatt attatgattc atattcctta acatttttct
     5341 atactttagt tatagaaatt aaaaagaggg atataatctt ggcagttaaa aaaagcaatt
     5401 taaaaacaaa aacaaaggtg acacaaacac ctgatttaaa ggttgttaca aaacccaaaa
     5461 cattaactaa accctataac gatatagatt taaacaactg gaaagattat tctcatgtcc
     5521 tcacagatac actgtgggaa ttcaactcca gagaaaaagg caacggtcac tcttatgact
     5581 atcacggaaa ctacatcccg caaattgcac agcaattgta tgaaagatat acaaaaaaag
     5641 gtgacattgt tttagacctt ttctttggtt ccggcacatc aggtatcgaa gctgttaaca
     5701 tgggcagacg ctgcattggt gttgaactga aacaggaaat ggttgactac gtaagtgaaa
     5761 aatttgacaa taaaacactt gtaacagacg taaatattat atgcggagat agtgcatcat
     5821 ctgatattgg ctacaaaata caagacagac ttgaagtcat gggcagagaa aaagctcaat
     5881 ttttagtgct tcatccgcct tatgacgata taattaaatt ttcagacaaa aaagaagacc
     5941 tctcaaactg tgaaaccaca gaagagtttt atgacctgtt tgaagaagtt gcaagaaacg
     6001 gttacgataa actggaaaaa ggcagatttg cagcgctaat tatcggtgac aaatacgcaa
     6061 aaggtcagta ttaccccttg agcttcggct gcatggaaag aatgaaccgt gccggattca
     6121 taacaaaagc aataattgta aaaaatatag aaggcaatga aaaagcaaaa ggcaaacagg
     6181 caaacctctg gagatacaga gccttgtacg gcggttttta tattttcaaa cacgaatata
     6241 taatgatttt tcaaaaaccg aataaataaa aaagtcccgt ttatacgaga tttttttatt
     6301 tagagattat taataatttc ttgtgtaaat tgtgacgttg aagcactgcc tccaaggtca
     6361 caggtgagat ttttattttc agctaagact ttgtaaagtg ctttttctat tttttgtgca
     6421 gcagcatctt cgtttatata tttgagcata ttaatagcac atatgagcaa cgcagtagga
     6481 tttgctttat cttgaccttt tatatcagga gcagagccgt gaacaggttc aaatacagca
     6541 caatcagcac caatattagc accctgagca acaccaagac cgccaataag ccctgctgta
     6601 aggtcagaaa caatatctcc gtaaagattt ggtaaaacaa gcacatcaaa cttttgcgga
     6661 ttttggacaa gctgcataca aaggttatct acaagtattt ctttaaattc aatctgtgga
     6721 taatcttttg caacctctct tgcacaattt aaaaacaatc cgtcagagag cttgcaaata
     6781 tttgctttta taacagccca gacagttttt ctaccgtatt ttacagcata gtcaaatgcg
     6841 tattttgcaa ttcttgttga agcttttctt gtaataattt ttattgattc agctgtatct
     6901 tcatcaattt gcctttcaat acctgcgtaa agatcctctg tattttctct tacaactaca
     6961 agatcaacat tgtcaaaagg agtttttata ccttcgatat ttttgcaagg tcttatattg
     7021 gcatataaat caagttcttt tctcaaagcc acattaacgc ttctaaaacc tttaccaata
     7081 ggggtagtaa caggagcttt cagggcaact ttattttttc ttatagaatc aatgacccgc
     7141 tgaggcaacg gtgtgccctc tgtctgtgct acatcagcac ctgctgattg tacatcccag
     7201 tcaatttcaa caccggctgc ttttattatt ttcaatacag cctctgaaat ttcaggccct
     7261 ataccgtcac cgggaattag tgttactttt ttcattttat tgttccttta aaaaagtcca
     7321 gcaaaagtaa tacagcatgt tttgcaaaaa gatatttgat aagcatgcgc ggatattttg
     7381 agcaaacatt gtattttgaa acatgcacac gttcttttga accaattcct atataaacca
     7441 gtccaaccgg ttttgtatca ctaccgcctg taggcccggc aatgcccgtt gttgcaatgg
     7501 cataatcagc accggtttca ttaagaagcc cctgaaccat ttcatttgca gtttctatac
     7561 tcactgcacc atgctctttt agagtttctt cttttacatt aaggtatttc attttagctt
     7621 cattagcata agtaacaaag ttggctttta tataagaaga actgcctgac acatcagtca
     7681 taagagagct caacaaaccg cccgtacaag attctgcaac agcaagtgtt ttattgttat
     7741 caataagaaa gcctgctgct tcattttgag cttcagtgtc tgttatgagc ttaaaaagtc
     7801 taatatagtc aaaaataaac ataatttatt cttttattta gtgcaaagga atatctaaag
     7861 gctgagtgag cataatagca aaatttttgc cttgtgcaaa atttacgtca ttaccttttt
     7921 taaacaggtc agcaacaccc attcctacgt agtatccagc accaccgaat acaccgccta
     7981 cagcaccaac cggtacacaa aggtattgaa gattttcacc tgtgcctttg ccccattgga
     8041 ttgttgaacc taaaatatct tttgattttt tccagttttg ctgtattgca tagccgtagt
     8101 taccgccttg ataaacaccg ccatctaaag tgagctcttt gtaatcataa agacctgcat
     8161 taacagggat ttgtcttcct gtaggtgtta caacatggtc aaaagaaaaa tagactattg
     8221 cgcttctgga aagtcttttg gccggagtaa ttttatttat tgtccctctg ataatagaac
     8281 ctgcgggcag agctatctga ccgttaacaa gtttgtcttc ttttagcatt gcagaaaatt
     8341 cgtcacccac actatcgatt tttgttgaaa ccgggtccat taattccaga ttcaaaacgg
     8401 ttcctgccgg tattctaata gcttgaatat cagctttcat tgttttatta cttattgcag
     8461 catttgcaga aatattcata ctcaaagcaa gacctgcaaa gagcaacccc attgtcatat
     8521 attttttcat aaaaatctcc taactaactg tttttatata actattttag agatttttaa
     8581 ataaaatgca atattatttt atttcttcat ataaagaaga tgcttcctgc acagaaatat
     8641 tgccnntttt aagaactttt acacttaccg atttattaaa atgttcaatt ctgataatgt
     8701 ccccttcttt taattgtttg gagggttttg ccggattgtc gttaacaaaa acacgtccct
     8761 ggtcagaaac atcgtttgca acagtacgtc tttttataag tcttgatact ttcaaaaatt
     8821 tatctaatct catataaaaa tgttactaaa aaaacatata aaattcattc tccatatttg
     8881 ttttataatt acagtgttaa attatttaac aaaacctgtc aggtaatggc aaaatttttt
     8941 ctttagagtc attattcaga tatacgaatt tttgagacaa accatgacta ccattaataa
     9001 ttcaacagct tattcaccat cacacaatgt aaaaaatgcc ggagttataa aatataaaga
     9061 aaaccctctc aaaggttttg taaaaaatga caaagacgga caggtaaaaa gggcagcact
     9121 ggcaggcagt gcaattacaa ctctggggta tttatttgca gctgcaaaaa ttgcaaaaaa
     9181 aggcagcttt aaagtgtcag acatgtttaa tgttgacttt aaaaatatgt ttaaggtcat
     9241 ggggcttgca acatcagctg ttgtaggcgg ccttgccggt gggttgattg ttgatgacaa
     9301 agaaaacaga aaacccaagc taaaagaagc aatgcaccaa ttcttaggca atgttgtgac
     9361 acctatttcc attgttggca ttgccggcga agctattgaa aaaagaaaat tttcaaaatc
     9421 aaaagaaatt gcactgagcg gacttgctgc aataacaggc gtagcagccg gtgtaacagg
     9481 aggaaactgg gttgcatcaa aagttaacga agcaatttac aaagaaaaag atgaaagaaa
     9541 actcggtgta aaagactttg gcatacacgt agatgacctg ctgactgtcg cagctctgac
     9601 ccctatcgga gatagcatca aaggctttat ttcaaaagca ctgcctgcaa tattcctcat
     9661 ttgcggatac gaagccggta caaaaaaagc tcataaaaaa cccgtaatcg aaaatcaaga
     9721 aaataattaa tttttgatat actataaaca taattcaaat ttacggggta aaaaagaatg
     9781 aaaaaggtta catatatttt taatattgcg cttgttacag tactaatggc ctgtacagca
     9841 gcgagcacat atgccaaaac aataaatttt gcaattgcat ctgatgttca ttactcctca
     9901 attacagaaa cagaaaacag aaagtttaca aacggagcaa aagctttaaa cggattaatc
     9961 gatagaatta atgaaaacaa atatgattat gttgtatttt taggcgacaa catagataaa
    10021 tctaataaaa agaatctggt agccttttta aatactgtaa aaaaaataaa aacaccttat
    10081 tatcttgtgc cgggaaatca tgatacacac aaaatatcag gactcacaaa ggaagaatat
    10141 gcaaagattg tgcatgaata caataaaaca caaaaaaaag cagcaacatc atattacttt
    10201 tatccatccg cagatattat agctattgtt cttgataacg tatcatcagg tatgccaagt
    10261 actcatggta tgtataatga caaaactcta aaatttcttg atgaaacatt aagcaaaaat
    10321 aaaaacaaaa aagcaataat attccagcat gttccatttg tagaaccata cgaaagcccg
    10381 tcacacaacn nnnnnnnnnn nnnnnnnnnn nnnnnnnata acatacttgc catctgttcc
    10441 ggtcattatc acagagagtt tgtcaaaaga gatgatagag gtatttatca tatatctgct
    10501 cctgcattgt atgaagcccc gtattattac tatgaattac aaataaaata tgataaaaaa
    10561 ccttttttaa aacctcaaaa tgttaaaatt gacggtacag ctaaacctgc tatataaggt
    10621 tattctatcc aacggaagtt tttaacatat ttttctttat caatgtcacc gtctattttt
    10681 acggtgaaca ctctgtactg ctggtcgcta agttcaactc cggggatttt gttaatatct
    10741 tttataattc cgcttttatc atttttgttc atttttaagc cgggtattga gctcaaaaga
    10801 gagttgaaag aaacattgcc aacagggcca agtatattgg atgctcgttt tgtaagtctg
    10861 ccaaacactc tgaggtttgc atagttttgt aagatatcaa actcaccgtt aatatacata
    10921 ttcaagttgt caccttttga atagacttca atatcctgtg caacaccgtt tttgagtgca
    10981 aaattacctt tgatagagtc aaaataacct gttttgacgg gagcaatcag agcaagcaga
    11041 ttattcaaac ttacccctgt aataccgctt tttataaagt tgcctgcttt taaaagatat
    11101 tctacagaac ctaatttagg catttttccg tcggttattt caaaatatac atacccgaac
    11161 atatttttta tacgttcttc ttcggagctg ccttttgtag tgattacgat attaccattg
    11221 gcattaccga atatctggtc tttaaacccg aataaagaag aagcaacctt gtttgaatct
    11281 acattataag ctgatacatt ggcttttata cgcccgttat caaagttata aacagcagta
    11341 cctgtcattt tacctgttgt cacatcaaag ccgagtttgt tcaagttcaa tatcatatcc
    11401 ttgccaagaa caaagtctgc ttcgtagttt gttgcattga ggtccctgat aacaatattt
    11461 tcagcagtca tgcttccttt tttgataata aaatctgaaa catttaacgg catttttaca
    11521 gaagtttttc ctgtttcaac aagcttaact gcagtattag gagtagggat tgtggtaaga
    11581 gagtcaacca gagtatccaa attgagtttt tgtgatttta attcaaggtt ttctattaca
    11641 attggaggtt taaaatcatt ttttatagtt gataacaata caaaatccga agccagaacc
    11701 attccgcttg ctcttacctc tacggtttta tccttaaatt ttacagagat atcttgcaaa
    11761 gttgtatcaa acaaaggcat atctaaattg tccatagaaa caaaaccaag aatatgcgga
    11821 ttgtttatat tgccttttac atttaatttg caattgaaca ttcccttttt caaaactgat
    11881 tttttgaata taacgttaaa cattttaacg ttagcgttat ttttcgtttc tatattcaaa
    11941 tttcttatat aaatatcttt tttatttttt gtcaggttga ttattccgtt tgcatacagc
    12001 acagtaattg gatatgcacg ggaattttga gaagtcataa accnnnntaa acaacattgt
    12061 tagacgtaac atttatatca gcgtttattt ctctttcttc gctttcatca ccaagatttg
    12121 cacccatgta ataaatatca gattccggtg caaacttcat tttgggccta atacgaaggt
    12181 tgttaatatt tccgctgata tcagctgtaa ttgtaatatc gcctttaggt ttaatcgggt
    12241 aagtcaaaaa gctgttgata tatttattag caaaatattc actaaatttg gtagtaaaat
    12301 aaccgcttac ttttaaagtc ttgtccaaat cccataaaga tacattcaaa aacactggtg
    12361 tgttatctat ttgagcaacc agagaannnn nnnnnnnnnn nnnnnnnnnn nnnnnnnaac
    12421 tgatacaggt gttttaaaat agctgtgctc aaatttaata tcttttagtg caattttacc
    12481 tttaagttta ttgttcctgc aattcaaatt tacatcagcg tgtccggaat aattttcgta
    12541 agcaattagc agttttttca ggttaggagg caagaatgcc atctttttca ttgcatttaa
    12601 tgaagacaca tcaaagttgg agatattcaa gtttccatcg gctctgtagt tttgagaaaa
    12661 caaattttga acttttgcat gtgcatatat ttttgaatta aacaattttg cattaaaatt
    12721 ctttaactcg aaattgccat tgttcaaagc aaaatttccg gaagaaatta taaaatcatc
    12781 atttctcgtt tccggatgaa aatagccttt tgcactcaat ttattcaaat caacttgagg
    12841 agtatttgat ttgtagtggg cattaaaagt aacaagagaa tgcgtcaaag gcaattttgg
    12901 tattggcaat ttatctgtgt ttgaaacaag agcaataatt tcatcggttt taacagagga
    12961 tgcattagcc tttaaatctg ttctgccgtc tttacaaaaa ccgtttacaa aaacttttga
    13021 tgagcctata aagcctgtta aatcagcctt ccaatccgtg tcattaaact cacccttacc
    13081 gctgattttc tgtaaagtaa taggagcaaa ttttagttta cccgtgctgt ttttaaaatc
    13141 tattttacca gagatattta atgtttcatt gcctaaaatt gagctgaaat cttttacaat
    13201 acctttgagc tttaatgcga cgctgacttg gcccgaaacg gcttctacag ggtcaaccat
    13261 tgcttttttt gaatcaagca tagggcttgt tgtaagtatt tcgaataaat ctgctgcatc
    13321 aatggccggt gatgtaacat caaaatctat atcacctgca aggtttgcct ttccatctat
    13381 ttttacaggt tgatttttta taaaaccgga agttgagtaa aaatgcatat ctttgccttt
    13441 aaactcaagt gctccgttag caccgtttat aacagtatta agcccatcca gagaaaccgt
    13501 cgtatttttg tagttgaatt gaccgtaaac ctcaccgtct gtcacggttc ctaaggtatg
    13561 tatatcaata ttacctttgc ctttaatat
//
LOCUS       DABS01000083            5403 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13108, whole genome shotgun sequence.
ACCESSION   DABS01000083 DABS01000000
VERSION     DABS01000083.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5403)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5403)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5403
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            298..513
                     /locus_tag="CPT85_03220"
     CDS             298..513
                     /locus_tag="CPT85_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017185218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="DAB24579.1"
                     /translation="MAKDVIEFEGKILESLPNAMFRVELENGHEILAHISGKIRKNFI
                     KILPGDKVKVEMTPYDLTRGRITYRLK"
     gene            579..692
                     /gene="rpmJ"
                     /locus_tag="CPT85_03225"
     CDS             579..692
                     /gene="rpmJ"
                     /locus_tag="CPT85_03225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005398614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="DAB24580.1"
                     /translation="MKVRASVKKMCKDCKFIRRRGRITVICKNPKHKQRQG"
     gene            840..1205
                     /locus_tag="CPT85_03230"
     CDS             840..1205
                     /locus_tag="CPT85_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004233729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="DAB24581.1"
                     /translation="MARLAGVDLPRNKRMIIALTYIYGIGPTRSAKILEACGISQDLR
                     TDDLTDDDIKKLRNELTNYHIEGDLRREESLNIKRLSEINSYRGMRHRRKLPARGQRT
                     KTNARTRRGKKTGPVSKKK"
     gene            1256..1642
                     /locus_tag="CPT85_03235"
     CDS             1256..1642
                     /locus_tag="CPT85_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015145006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="DAB24582.1"
                     /translation="MARPIKTKKKEKKNVLQGVVHIQSTFNNTIVTSCDTQGNAIAWA
                     SAGGCGFKGARKGTPFAAQSAAAQVAKKSVDQGMKKVEVYIKGPGSGRETAIRAIQAA
                     GLEITLIKDVTPIPHNGCRPPKKRRV"
     gene            1668..2366
                     /locus_tag="CPT85_03240"
     CDS             1668..2366
                     /locus_tag="CPT85_03240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015510903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="DAB24583.1"
                     /translation="MYFGIPVKYGQREPDKNQDDVKIVKKRKKKESKLAKYTGPSNKL
                     FRNFGVTDLSNRKLVSSLRQTASGQHGAARKKLSDYALHLNEKQKIRLTYLVSEKQFA
                     KYYNKAARTKGVTGTVLLQLLESRLDNVVFRAGFATTRKQSRQIVNHGHVLVNGKKVD
                     IPSYLVKAGDEITVRAKSSDFVKAVMEPLDVAAPAWMTVDANAQKIVFDRIPEREELD
                     PEFKEQLVIEYYSK"
     gene            2407..3393
                     /locus_tag="CPT85_03245"
     CDS             2407..3393
                     /locus_tag="CPT85_03245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_431256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="DAB24584.1"
                     /translation="MELKIKNVTTTTGSDGSQYGKFSIEPLERGFGNTIGNALRRVLL
                     SSLEGAAVTAVRIEGITHEYTAIPGIVEDVIDIMLNLKGMVVKTDSKEPQQLRLDIDK
                     PGPVLASDIQLPAGVKIVNPDWLICTVAEGGSIHADIVVETGKGYIAHDVLKNNNGAM
                     PIDMLPIDATFMPIKRVSYNVENTRVGDVTDFDKLNLEIWSNGSIDVNVALSQAANIL
                     IEHFMQIAAITGTPVVSMPQVAAVIEEEVVADTSAPTISIEDLELSVRAYNCLKRASI
                     NNMAELLKKSEHDLLNIKNFGKKSSDEVIEKLHQFGLDLMPNPEGVDMDELV"
     gene            3439..3876
                     /locus_tag="CPT85_03250"
     CDS             3439..3876
                     /locus_tag="CPT85_03250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019508912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="DAB24585.1"
                     /translation="MRHQSKKHHLGKAQDQRNALLRSLATELILHGEIKTTMARAKAL
                     KPYAENIITLAKQGTLHSRRLAAKFIFDKETGKFMNFETGEVLEGVEKADKEQKAVAQ
                     TILRKLFVETGKKYANRNGGYTRIYRMPPRRGDAAEMALIQLV"
     gene            3888..4673
                     /locus_tag="CPT85_03255"
     CDS             3888..4673
                     /locus_tag="CPT85_03255"
                     /inference="COORDINATES: protein motif:HMM:PRK00021.2-1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="DAB24586.1"
                     /translation="MPKYSIIVEYIGTNYSGSQVQPDKVTIQSELNKALSTLKVADAF
                     NEEGSQKQIIKTIFSGRTDAGVHSKGQVVHFESSKPIVASRFLNSINGILPNDISVKS
                     IQEVDEKFHAQLSAKYRVYQYKIVNRQHRSAWDKHSLLVREPLNIERMNKGLSYLIGE
                     HDFTSFKSMRTANPAKDCIVYKAECKKEGDIITFEIAGNRFLYNMVRTIVGTLLMIEH
                     NKFEPEFMKQVLEAKDRTKAGPTISPDGLTLIEVGYEQYNLVK"
     gene            4704..5141
                     /locus_tag="CPT85_03260"
     CDS             4704..5141
                     /locus_tag="CPT85_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014144346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="DAB24587.1"
                     /translation="MKTYSAKPLEVERKWYVIDAEGKTLGRLATVCANLLRGKLKPEY
                     TPNVDTGDFVIVINADKIQVTGNKETDKIYYHHTMYPGGLKSISFKDLMAKDPTKAIE
                     KAVKGMLPHNTLGAQQFTKLKVYAGAEHPHEAQKPVVYEMEVK"
     gene            5141..>5403
                     /gene="rpsI"
                     /locus_tag="CPT85_03265"
     CDS             5141..>5403
                     /gene="rpsI"
                     /locus_tag="CPT85_03265"
                     /inference="COORDINATES: protein motif:HMM:PF00380.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="DAB24588.1"
                     /translation="MADTKEFKATGRRKTSIAVVKLVKGKGRVFINGKTMDAYLGNRP
                     AMKILVYKPLALTENMENFDVKVKAVGGGICSQAGAIRHGISRA"
BASE COUNT         2017 a          955 c         1053 g         1378 t
ORIGIN      
        1 taacttgata tttcgatacc ctctatttgt ccagttgttt ttttaatatt tgaataatta
       61 aaaatttaat aaatcttaac aaagttcttg aaaacgcgca cgaaaagcca ttattgaaca
      121 actgcattac tattaatcat tttgttattt tatataaaca attattttct cttttgttaa
      181 aaagggctca aatcttaata aaatcaatca aaaaagcttg cttgtggatt tttaccatgt
      241 aagataaata tacaagggcg aattatgccc gtaattaata tctaaaaaga aggtaaaatg
      301 gcaaaagacg taatcgaatt tgaaggcaag attttagaat cactaccgaa tgcaatgttt
      361 agagttgaac tcgaaaacgg acacgaaata cttgctcaca tttcaggaaa aataagaaag
      421 aatttcatca aaattcttcc cggagacaaa gtcaaagttg aaatgactcc gtatgattta
      481 accaggggaa gaatcactta cagacttaaa taaatacgct cccgcctctc gggacgtacg
      541 cggcaaaaac aataaaaaca ctagataagg aaaacaaaat gaaagtaaga gcatcagtta
      601 aaaaaatgtg caaagactgc aaattcatca gaagaagagg cagaatcaca gttatttgta
      661 aaaaccctaa acacaaacaa agacaggggt aggatgcttc agccggagca gagccttgta
      721 gggctttcag gattgaaaga ccgtaaaggc ggagcttaac aacggcgacg tggaaatctt
      781 tgatttcctc aggagcaatt acaacaaaaa caatcactaa gttaacataa ggagaaacaa
      841 tggcaagatt ggctggggtt gatttacccc gtaacaaaag aatgataatc gctttaacct
      901 atatctacgg tataggacca actcgttctg ctaaaatctt agaagcttgc ggaatttcac
      961 aagacttaag aacagacgat ttgacagatg acgatatcaa aaaattaaga aacgaactca
     1021 caaattacca catcgaaggt gatttgagaa gagaagaatc tcttaacatc aagagattat
     1081 ctgaaatcaa ctcttacaga ggtatgcgtc acagaagaaa actccctgca agaggacaaa
     1141 gaacaaaaac taacgcaaga acaagaagag gcaaaaaaac aggccctgtt tctaaaaaga
     1201 aataagaaat tgagttagtt taagtacaca agagtaataa ttaaaggaaa taaaaatggc
     1261 aagaccaatt aaaactaaaa agaaagaaaa aaagaatgta ttgcagggtg ttgttcacat
     1321 tcaatcaaca tttaacaata caatcgtaac ttcttgcgat actcaaggta atgctattgc
     1381 atgggcatca gcaggcggct gtggttttaa aggtgctaga aaaggcactc cgttcgcagc
     1441 tcaatctgca gcagctcaag tagctaaaaa atcagttgac caaggaatga aaaaagtaga
     1501 agtatacatc aaaggacccg gttcaggccg tgaaacagct atcagagcta ttcaggctgc
     1561 aggtttggag atcactttaa tcaaggacgt aacaccaatc cctcacaacg gatgccgtcc
     1621 tcctaagaag agaagagttt aatctctgac cttcccgtca ttccggaatg tatttcggaa
     1681 tccccgtaaa atacggacaa agagagcctg ataaaaatca ggatgacgta aaaatagtta
     1741 agaaaagaaa gaaaaaggag tcaaaattgg ctaaatatac aggaccttca aataaattat
     1801 tccgtaactt cggtgtaacg gatttatcta acagaaagtt ggtttcttct ttgagacaga
     1861 ctgcttcagg tcagcatggt gctgcaagaa aaaaactttc tgactatgct cttcacttaa
     1921 atgaaaagca aaaaatcaga cttacttatt tagtaagcga aaaacagttt gcaaaatact
     1981 acaacaaagc tgcaagaaca aaaggcgtta caggtacagt tcttttacaa ttgttagaat
     2041 caagacttga taacgttgtg ttcagagcag gttttgcaac aacaagaaaa caatccagac
     2101 aaatcgttaa ccacggccac gtgcttgtta acggcaaaaa agttgacatt ccatcatacc
     2161 tagttaaagc aggcgacgaa atcacagtaa gagcaaaaag ctcagacttc gttaaagctg
     2221 ttatggaacc gttagatgta gctgctccag catggatgac agttgatgct aacgctcaaa
     2281 aaatcgtgtt cgatagaatt cctgaaagag aagagcttga tcctgaattc aaagaacaac
     2341 tcgttattga gtactactca aaataatcca cataagtccg aataactaca attaggagaa
     2401 aaacagatgg aattaaaaat taaaaacgta acaacaacaa ccggttctga cggatcacaa
     2461 tacggaaaat tttctattga gccgttagaa agaggctttg gtaatacaat cggaaacgca
     2521 ttaagacgtg tattgctttc ttcattggaa ggtgcagctg ttacagcagt tagaatcgaa
     2581 ggtattactc acgaatacac agctatcccg ggtattgttg aagacgttat tgatataatg
     2641 ttgaatctta aaggtatggt tgtaaaaact gattcaaaag aacctcaaca gttaagatta
     2701 gacattgata aaccgggccc tgttttggct tctgacattc aacttcctgc aggcgttaaa
     2761 attgttaacc ccgactggtt gatttgtaca gttgctgaag gcggttctat ccacgctgat
     2821 atcgtggtag aaacaggcaa aggttacatt gctcacgacg tattgaaaaa caataacggt
     2881 gcaatgccta tcgatatgtt acctatcgat gcaacattca tgcctatcaa acgtgtcagc
     2941 tacaatgtag aaaacactcg tgtaggcgat gttacagact tcgacaaact taacctcgaa
     3001 atctggtcaa atggttctat cgatgtaaac gttgcattgt ctcaagcagc taacatctta
     3061 atcgaacact ttatgcaaat tgcggcaatc acaggtactc ctgttgtttc tatgcctcag
     3121 gttgcagctg tgattgaaga agaagttgtt gctgatacaa gtgctcctac aatttcaatc
     3181 gaagatttgg aattgtctgt aagagcatac aactgcttga aaagagcaag catcaacaac
     3241 atggctgaat tactgaaaaa atcagaacat gatttgttga acatcaaaaa cttcggtaaa
     3301 aaatcatctg acgaagttat cgaaaaatta caccaatttg gtttagacct tatgcctaac
     3361 cctgaaggtg tagatatgga cgagcttgta tagtctgtat ttaagaacag aaataattaa
     3421 gaaaaaggat aaataaaaat gagacaccag tctaaaaaac atcacttagg aaaagcacaa
     3481 gaccaaagaa atgccttgtt gcgttcttta gcgactgaac ttattttgca cggtgaaatt
     3541 aaaactacta tggcaagagc aaaagctctt aaaccttatg cagaaaacat tatcactctt
     3601 gcaaaacaag gtactcttca ctcaagaaga ttggctgcaa aattcatctt tgacaaagaa
     3661 actggcaaat ttatgaattt tgaaacaggc gaagttcttg aaggcgtaga aaaagctgat
     3721 aaagaacaaa aagctgttgc tcaaacaatt ttgagaaaat tgtttgttga aacaggcaaa
     3781 aaatacgcta acagaaacgg cggttacaca agaatctaca gaatgcctcc aagacgcggc
     3841 gatgctgctg aaatggcatt gattcaactc gtttaatcga gggtgtgatg ccgaagtatt
     3901 caattatagt tgaatatatc ggaacaaatt attcgggctc acaagttcag cctgataagg
     3961 taacgattca gtctgaactt aacaaagccc ttagcacatt gaaagtggca gatgccttta
     4021 acgaagaagg cagccaaaaa caaataatca agacaatctt ctcaggcagg actgatgcag
     4081 gtgtgcattc aaagggtcag gttgtccatt ttgaaagttc aaaacccatt gttgcttcaa
     4141 ggtttttaaa ctcgataaac ggaatcttac ctaatgatat aagcgttaaa tcaattcaag
     4201 aagttgatga aaagtttcat gcacagttga gtgcaaaata cagagtgtat cagtacaaaa
     4261 ttgtcaacag acaacacaga agcgcttggg ataaacattc tctccttgtt agggaaccct
     4321 taaacattga gaggatgaat aagggcctat catatttaat cggagaacat gattttactt
     4381 cgtttaaatc aatgagaacg gccaaccccg caaaagattg tattgtatac aaagctgaat
     4441 gcaaaaaaga aggtgatatt attacttttg aaattgcagg caacaggttt ttgtataata
     4501 tggtcagaac aattgtcggt actttgctta tgattgagca caataaattt gaacccgaat
     4561 ttatgaaaca agtgctcgaa gctaaagaca gaacaaaagc gggtcccaca atcagccctg
     4621 acgggttgac actgattgaa gtgggatatg aacaatataa cttagttaag taaacaaaag
     4681 aaaaataaaa ggaaaactga aagatgaaaa catattcagc aaaacctctt gaagttgaaa
     4741 gaaaatggta tgtaatcgac gccgaaggta aaactttggg cagattggct actgtttgcg
     4801 ctaacttact cagaggcaaa ttaaaacctg aatacacacc taacgttgat acaggtgatt
     4861 ttgttatcgt tatcaacgct gacaaaattc aggttacagg caacaaagaa acagataaaa
     4921 tttactacca ccacacaatg tatccgggcg gattaaaatc aatttctttc aaagatttga
     4981 tggcaaaaga ccctacaaaa gctattgaaa aagctgttaa aggtatgctt cctcacaata
     5041 cattgggtgc acaacagttc actaaactta aagtttatgc aggtgctgaa catccgcacg
     5101 aagctcaaaa acctgtagtt tatgaaatgg aggttaaata atggctgata ctaaagaatt
     5161 caaagcaaca ggcagaagaa agacctctat tgcagttgta aaactggtta aaggtaaagg
     5221 cagagtattc attaacggta aaactatgga tgcatatctt ggtaacagac cggctatgaa
     5281 aattcttgtt tacaaacctt tagcattgac agaaaacatg gaaaactttg acgttaaagt
     5341 taaagctgtt ggcggcggta tctgctctca agcgggtgct atcagacacg gtatttcaag
     5401 agc
//
LOCUS       DABS01000084           15457 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_7159, whole genome shotgun sequence.
ACCESSION   DABS01000084 DABS01000000
VERSION     DABS01000084.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 15457)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 15457)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15457
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..418)
                     /locus_tag="CPT85_03270"
     CDS             complement(<1..418)
                     /locus_tag="CPT85_03270"
                     /inference="COORDINATES: protein motif:HMM:PF01584.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24555.1"
                     /translation="MEFKTPLLTIEDPDNLHLCFVLDNKTYALNAKNVLEVTTLPLIN
                     EPQKLPEYIVGILNYNDMFINVIDIRKVFSLTQKKYELSNKIIIIKGSESLIAIIVDE
                     VTDFFTAHPSKIQRVMGESFNNIARTFYKLNDEVVNI"
     gene            546..1556
                     /locus_tag="CPT85_03275"
     CDS             546..1556
                     /locus_tag="CPT85_03275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015148558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24556.1"
                     /translation="MSSGEELTYRKKSDIKFVLDVVFLIVLLILIISISIKNLWEPGV
                     IAGVSLLFVIYIGQYIWTREWLLGELRKNISEKDKRTINSAQKILDLTVTQKNAIVKY
                     EDSYNQAANNIGKMKSLAFALKQNAKEILYKVSQSLQNTDIEQKPVQANIDKMMVLKQ
                     RIQIIAELILELSEYIQQIGSIIGLVEDIAEQTNMLALNAAVEAARAGEHGKGFAVVA
                     GEIRKLADESKQATTKIASLINDIQHTTNSTVMATEEGSKEIESGVKLAGNIEQNFNV
                     LNDALTNLMKFIESVSFNSENQEKLSSEIITELKENAGDLSDILASINTNIENINTLK
                     NE"
     gene            1569..>1945
                     /locus_tag="CPT85_03280"
     CDS             1569..>1945
                     /locus_tag="CPT85_03280"
                     /inference="COORDINATES: protein motif:HMM:PF01627.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="DAB24557.1"
                     /translation="MDFLPEEFEEILNIFRGETEEIIQKLNNNLLQLENSPNNKDLIV
                     YLFRDAHSLKGAARMIGFNNIQRLAHKAEDVLGLAKENKIVINREISDALYKAMDLLS
                     DLIQESVKLKKEYYTDDIQKIID"
     assembly_gap    1946..1966
                     /estimated_length=21
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2171..2193
                     /estimated_length=23
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <2194..4678
                     /locus_tag="CPT85_03285"
     CDS             <2194..4678
                     /locus_tag="CPT85_03285"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01584.17,HMM:PF02895.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24558.1"
                     /translation="YEIKNEIKNIFAKVNFVIKSSNLMTDDEIKDIDNKLTNTVNFLN
                     KIYEDLGIEKIDVKEKVSQKIQQDKDNAKDKQNKNQTSAHSDTLNNLAEKIEFLKEGF
                     NKFESDLSQVPQLYDEIKSLVEITNKKEIKQICDKIMEILAIVKKGKTLPDKEIITIL
                     KQSLLSVEKLTLETKEEQDDVTLVLQRLDIIKQMMDLNSSVNPLSNLSSTLDESSLPV
                     KKAQDFFNSFETTSIRTLRVDSKKLDRLVSQMGELIIGRIKHKKNISELENILSDLTE
                     WRNFNHKSQSFIKYYDRKYINSEDAVDYSTLSVFSKQIFSIFQENSSKIIKLNNRILN
                     LQKSLDEEDTKLNTIVTQLESMIKNIRVLPLATIFHMFPRMIRDISKDTGKDIELLIS
                     GSETSADKKVIEEIKAPLMHIIRNSIDHGIETPQERIAAGKSPKGKIYLIAKSMQNKI
                     IIEIHDDGRGIDLQKIVNRALEKNMITQKEAQYLSAEQIMNIIFWPGFSTEQVVTELS
                     GRGVGLDIVQTKISQLNGTVKVFSVPNQGTKITIELPISMSTLKAFIVECSQQFFAMP
                     MTSIKNVMWIKEEDIYLRNDTKSIIIEGKTVNLFYLSELMKLPLSEESSKSNKKTVIL
                     IEVENSLMGIIVDRILGDQNILQKKLDPPIIKLKNISGITTLANGDVCLILNLPELYK
                     STYTPVEKPLIPVPSYKLRARENKDYKILIVDDSITTRELLKNILIHWGYSFEMVKNP
                     KEAFEILYKENFDLILSDMEMPEMDGSMFIKELKNTPKFKDIPVVLITSYDTERLAKD
                     IPDIDAFIKKSNFNQDYLLDVIEKLLKYE"
     gene            4671..5246
                     /locus_tag="CPT85_03290"
     CDS             4671..5246
                     /locus_tag="CPT85_03290"
                     /inference="COORDINATES: protein motif:HMM:PF01966.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="DAB24559.1"
                     /translation="MNKLSVYEKYCKNEEHAKEVEKYALMILSALKDAVEAYKNITER
                     ETLYLQIAALLHDIGYVVEKKSHHKHAMNLIIQEGLEGLDNEETKVTANIARYHRGSL
                     PDETKHEIYKNLTPQQKNTVQLLGSIVRLADGFDKPHKNLILRMEAKETPDEVNLYLK
                     TIGFKPNLNMAEKKKDMLEHTLQKKINFIFV"
     gene            5313..6047
                     /locus_tag="CPT85_03295"
     CDS             5313..6047
                     /locus_tag="CPT85_03295"
                     /inference="COORDINATES: protein motif:HMM:PF12811.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24560.1"
                     /translation="MFKSSNPLLSRMDNNVQMLEGAPMTVSGTITKTFILLLIAAVSA
                     AAVVYEAFMGYADKVMMIMGIALFAGLGTGLVTAFVPKLAKFLAPVYAFAQGALLAAL
                     SLIMETQFPGIAMQAVAATFFTFFIMLVLYRTGAIRATEKFRATIMSAMLTILVLYLI
                     NFVGGFFNFSIPFISGYSKMGIVFSVIVVLVAALSLILDFDFIEQGAQKMLPKDYEWY
                     GSFGLLVTLVWLYVEILRLLSRLRND"
     gene            complement(6049..6732)
                     /locus_tag="CPT85_03300"
     CDS             complement(6049..6732)
                     /locus_tag="CPT85_03300"
                     /inference="COORDINATES: protein motif:HMM:PF04055.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic radical-activating protein"
                     /protein_id="DAB24561.1"
                     /translation="MTRTAKVAEIFDSVQGEGPYIGYRQLFVRFCGCNLLCDYCDTEF
                     DKGDDYTVAQLVEKIKSFKLEPLHSVSLTGGEPLLQYEFLKEFLPSLKQLGLKIYLET
                     NGTMDRALDKVIEYIDIVSMDFKLDSSAKIGDLYSKHDAFLEICKKHSKDTFAKLVFD
                     ETIRDFEIDECVKLAQKYKIPVILQPKMDGDKIKVSHDKIVETFNKFSEKYHDTRLIG
                     QVHKFFSIR"
     gene            complement(6725..7108)
                     /locus_tag="CPT85_03305"
     CDS             complement(6725..7108)
                     /locus_tag="CPT85_03305"
                     /inference="COORDINATES: protein motif:HMM:PF01556.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24562.1"
                     /translation="MQTKVTKVITAAETEICXXESRFFSYEGANVLCEIPITPFEAVL
                     GANIEVPTLCGNVSMKIPPNTSTGQKFRLSEQGVEDKKTNKKGDQIVTVRIEIPKEAS
                     VQEVALYEQLKNISTHKIRENLLND"
     gene            complement(7035..7847)
                     /locus_tag="CPT85_03310"
     CDS             complement(7035..7847)
                     /locus_tag="CPT85_03310"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00226.29,HMM:PF01556.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24563.1"
                     /translation="MNQYYQKDLYAILGVSPDCDEAKIKSAYRKQARIWHPDVNDNSQ
                     ESIVRFKEITEAYEILCDTQKRSQYDIIKGFNIRKESSYTSKKQTQSQAKKAYNQTSS
                     TTTKEKTHTYTSTNDTYTKSAQNNEKNTQKADNKTDKSSFSQVFENILDGLFTSDNAK
                     NKKAKKPKPENGRDINLNVNIKMSEAVSGTHRTVNVLHSERCPKCEGRRFINGAKCPL
                     CKGSGEVSIHKKLNVKIPAGIKKGAKIRIANEGNKGYNGGRNGDLYXREQVF"
     assembly_gap    7054..7055
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(7966..9129)
                     /locus_tag="CPT85_03315"
     CDS             complement(7966..9129)
                     /locus_tag="CPT85_03315"
                     /inference="COORDINATES: protein motif:HMM:PF00155.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="DAB24564.1"
                     /translation="MKSLFERYKKELKELHDSSCERKLCSFKKAGKYIFEDNKKYLNL
                     SSNDYLGIAEDKEVLDRFFKIADFSLGSASSRLLTGSSYVYAKLECLLAALLRKDKAL
                     IFNSGYHANVGIMSALLSKKDAVFCDKLNHASILDGIKLSDAKMFRYKHLDYEHLESL
                     LKEHRDEFENVIIVTESLFSMDGDIADLNRLIDLKKKYNALLVVDEAHAFGVFGEKGL
                     GVAEMQGCLSDIDLYAATLGKAVGSVGAFCAGHDVLINYLINKCRPLIFSTALPEINV
                     AFSYCMITEIIPNLKQQRKELLVTAQKLREKLNSYGLKTMGESHIVPVILGSNENAVK
                     VSKELIKNGYYLLPIRHPTVAKDSSRVRISLRADISYEEVENIPEIIKNVLDE"
     gene            complement(9143..9526)
                     /locus_tag="CPT85_03320"
     CDS             complement(9143..9526)
                     /locus_tag="CPT85_03320"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24565.1"
                     /translation="MIDSAQLIKIIHQLPASLISIIVTNVLLILGFALGKLVLYRNEN
                     AIKFYAYFSVVISLLFALYFISILWFSLSNLYLGNAVYAAIFPIFLFLPFIIGHFASY
                     EKVHFYTNIQILTLIISLLLALSFI"
     gene            complement(9526..10317)
                     /locus_tag="CPT85_03325"
     CDS             complement(9526..10317)
                     /locus_tag="CPT85_03325"
                     /inference="COORDINATES: protein motif:HMM:PF12697.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="DAB24566.1"
                     /translation="MTGSPFEMKKMGKALYDADFDVYCYCLPGHGTSPINIKNVRWED
                     WYSDSTLHYRELTQKYDEVYLGGLCMGAVLALAIASEYREVRGILSLSTTLFLDGWTI
                     PWYNFLMPIGVHTILRYYYSFPEREPYGLKNETLRKKIAALQKRNTEALDNYPMSCIY
                     ELLKLSKYTQKNMFKVKAPILLMHAREDDLTSTKSAEFVFKNIGSSIRKYIELENSYH
                     LVVMDNERDFVFEKSIEFLNSLSDFGPVIEKQPPIDDTFMESAGA"
     gene            complement(10403..11785)
                     /locus_tag="CPT85_03330"
     CDS             complement(10403..11785)
                     /locus_tag="CPT85_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004865458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="DAB24570.1"
                     /translation="MKLSDEEIKAIDKEYCSWGDTVHYHDDQTIFRDCEGSYMYDGKD
                     TPYLDLQMWYSSCNLGYKNKRVLNAVLDQYQTMPQISSRFVYDYKALLAEKIAKANLD
                     RYGIKGRVQFNVGGAQVNEDMLKLIRNYTKKPRMFAFMGGYHGRTIGTTAVTSSYRYR
                     EHFGHMSDTAHFVPFPYCFRCPYDKKCESCNMYCVKQFAKLFESEYNGVYDPKTKDCE
                     FGGFIAEPLLGTGGYIVPPKGYFKELKKVLDEHNILFMVDEVQMGCFRTGKLWAMEHF
                     GVKPDAMTFAKSITNGMNPLAGMWAKEELINPKVFPAGRTHSTYAANPIGTRAGYEVM
                     SIFDEERKELESEIARKGAKFLDGLKALEKKYKNIGTVNGLGFALSVEVTEADRFTPA
                     RELCDEIIEAGLKGDLTYKGKKCGLILNNGGYFKNIITLVPQLYISDEEIDMALELMD
                     QLFDRYMEKA"
     gene            complement(11813..12475)
                     /locus_tag="CPT85_03335"
     CDS             complement(11813..12475)
                     /locus_tag="CPT85_03335"
                     /inference="COORDINATES: protein motif:HMM:TIGR01489"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24567.1"
                     /translation="MKNFQFFCDFDGTITKEDTLNKFLRVYAKTDWLEVEEKWMNGAI
                     GSKQCIEEQMQLFPLMEQKTIDEFIESIEIDETFPDFLEYLKSEDIDFTIVSDGFDYF
                     IERILAKNNINGVKIFSNKLKFENGRFQTFFPHFNENCKRKSGVCKCSVVKNHRIVTK
                     PVLYAGDGLSDFCVSRKVDILFAKGSLLEYCKDTKNDYRDGFDLVGFKSFDEIKNYIK
                     SV"
     gene            complement(12490..13371)
                     /locus_tag="CPT85_03340"
     CDS             complement(12490..13371)
                     /locus_tag="CPT85_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018085721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="DAB24571.1"
                     /translation="MRFDAGEIITAMITPMDKDRKVDYKALEKLVEHLIATGTESILV
                     AGTTGESPTLTHDEEVEIFRFVKKVANGRAKLIMGAGSNCTQTAVMATNNAKECGADA
                     ILSVVPYYNKPSQKGLIEHFSTIAKSTDLPVLLYNIPGRTGITMQPETIAHLAKEHKN
                     IFAVKQSLADMDVITETRRLCPDDFVIYSGDDSLTLPMVSVGAHGVISVASHIIGNQM
                     HEMLNLYKSGKVKEATDMHLKLYPLFKKIFMAPNPVPVKECLKKMGIIENYVRRPLVE
                     LDEEERNELYSVLEQYI"
     gene            complement(13447..13902)
                     /locus_tag="CPT85_03345"
     CDS             complement(13447..13902)
                     /locus_tag="CPT85_03345"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24568.1"
                     /translation="MKKIFKTLILTTMMTGMCLPAFAIKNKNPVVWNQKEPVEVLAVN
                     NALSMDIIYNRMRTLAFMANLDCHEFSRSYALKSSTGKTYVRQRRQSVRENTRAAEYI
                     AKVFSENSGNIYFAPNGLGLFAALVGEFYIGNESLSKILVQKGYCSYVE"
     gene            complement(13886..15295)
                     /locus_tag="CPT85_03350"
     CDS             complement(13886..15295)
                     /locus_tag="CPT85_03350"
                     /inference="COORDINATES: protein motif:HMM:TIGR01574"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="DAB24569.1"
                     /translation="MENKNFLKKVYIETMGCQMNKSDTERILGMLSHFGYEHTEESKD
                     ADLLIVNTCSIRQLSADKAYSLVGVWGKWKNDERQKELQGKPFKEIKIAFCGCVAQQD
                     KEKLLKRFPYVDLVFGTNNVYELPDLIKRINEGERVCATNETPKKFTDGEEEAKYEIK
                     RAKSLNAWIPIMEGCNNFCTYCIVPFTRGRERSRKPAEIIAEAKKAVAEGFKEITLLG
                     QNVDSYGKTLDANNDYDGRDVTLANLLRDLNKIDGKFRIRFVTSYPTDISDDLIQAVK
                     ECDKVCEFFHIPMQSGNSNVLKEMNRRYDREQYGKIVKKIRETFEDVAITSDFIAGFP
                     GETEEEFLDTLSAIDEFELDYSNTAAYSPRVKTKAAKWTDKFIDEETKFERLARLNEK
                     NRQACLKSNEKCVGKTFEILVESYENKDGEIILAGRAPNNKIVHFRGDKALVGEFVDV
                     KITGASTWHLRGELDEKNI"
BASE COUNT         4943 a         2978 c         2662 g         4828 t
ORIGIN      
        1 ttatattaac aacttcgtca ttaagtttgt aaaaagtacg tgcaatatta ttgaagcttt
       61 cgcccataac tctttgtatt tttgaaggat gtgccgtaaa aaagtctgtg acctcatcaa
      121 caataattgc aatcaaagac tcgcttcctt taataattat tatcttatta gacagctcat
      181 attttttttg tgtgagcgaa aaaacctttc ttatatcaat aacatttatg aacatatcgt
      241 tataattgag aatacccaca atatattcag ggagcttttg aggttcgtta atcaaaggca
      301 gagtagtaac ttccagcacg ttttttgcat tgagggcata tgttttgtta tcaagcacaa
      361 aacataaatg cagattgtca gggtcttcta ttgtcagcaa aggagtttta aattccatat
      421 aattgtacta tttcctgtat ctgatacttg gcgcaaatgc aaatttgtaa taaaataatt
      481 atattgcatt ttcaccaaaa ataacaagag tttatacaag gaattaagac gaggagtcaa
      541 ttaatatgag cagtggcgaa gaattaactt atagaaaaaa atccgatata aaatttgtac
      601 tggatgttgt gtttttaatt gtacttctta ttttaatcat atcaatatct atcaaaaacc
      661 tctgggagcc tggtgttatt gcaggtgttt cattgctttt tgttatttac ataggccaat
      721 atatctggac aagggagtgg cttcttggag aattaagaaa aaatatctcg gaaaaagaca
      781 aaagaacaat taactctgca caaaaaattc ttgatttaac ggttactcaa aaaaatgcaa
      841 ttgtaaaata cgaagattca tacaatcaag cagcaaacaa tataggtaaa atgaagtcgc
      901 ttgcatttgc tttaaaacaa aatgcaaaag aaattttata caaagtttct caatcattac
      961 aaaacaccga cattgaacaa aaacctgtac aggcaaacat tgataaaatg atggttttaa
     1021 aacagcgtat tcaaattatt gcagaattaa ttttggaatt aagtgaatac atccaacaaa
     1081 tcggttcaat catcggcctg gttgaagata ttgcggaaca gacaaacatg ctggcactaa
     1141 acgctgctgt tgaagcggca agagccgggg agcacggcaa aggttttgct gttgttgcgg
     1201 gcgaaatcag aaaactcgct gacgaatcaa aacaggcaac tacaaaaatt gcttcgttaa
     1261 tcaacgacat ccagcacaca acaaactcta ccgttatggc aacagaagag ggaagcaaag
     1321 aaattgaatc cggagtaaaa cttgcaggca atattgaaca aaactttaat gttttgaacg
     1381 atgctttgac caatctgatg aagtttattg aaagtgtttc attcaattca gaaaaccagg
     1441 aaaaattgtc ctctgaaatt attacggaac tgaaagaaaa tgcaggcgat ttgtctgata
     1501 ttctggcatc aatcaacaca aatattgaaa acattaacac tttaaaaaac gaataagtgg
     1561 aataaaaaat ggatttttta cccgaagagt ttgaagaaat tttgaatatt ttcagaggcg
     1621 aaactgaaga aatcattcag aaattaaaca acaacctcct tcagctcgaa aacagcccta
     1681 ataataaaga ccttattgtt tatttgttta gagatgccca ctctcttaaa ggtgctgcaa
     1741 gaatgatagg tttcaacaac attcagcgcc ttgcgcacaa ggcagaggat gttctcggac
     1801 ttgcaaaaga aaataaaatc gtcataaaca gagaaatatc agatgcctta tacaaagcaa
     1861 tggatttgct ctcagacctt atacaagaat ccgttaaact aaaaaaagaa tactacacgg
     1921 atgatatcca aaaaattatt gattannnnn nnnnnnnnnn nnnnnncaat ctgttgaaga
     1981 atcaaaaaat attacacaaa acgagcaaaa caaagaaata acaacaaatc caaaaacaca
     2041 aaatcaggat tttttgaaaa caacaatcac aatcaatgct cttttgtcag aagcatatct
     2101 tttgctgaaa aatatgcagg gagaggaagg ttcgtcttac atagaaacat tttgtgatgt
     2161 aataaaacag nnnnnnnnnn nnnnnnnnnn nnnttacgaa ataaaaaacg aaataaaaaa
     2221 tatttttgca aaagtaaatt ttgtcataaa aagctcaaac cttatgacag atgacgaaat
     2281 aaaagacata gataataaac tgaccaatac cgttaatttt ttaaacaaaa tctatgaaga
     2341 ccttggcatt gaaaaaatag atgttaagga aaaagtatct caaaaaatac aacaagacaa
     2401 agacaacgcc aaagacaagc aaaacaaaaa tcaaacttct gcacacagtg atactctaaa
     2461 caaccttgct gaaaaaatag aatttttaaa agaggggttc aacaaatttg aatcagacct
     2521 gtcacaggtt ccacagctct atgacgagat aaaaagcctt gttgaaataa ccaataaaaa
     2581 agaaataaaa caaatttgtg acaaaatcat ggagattttg gcaattgtaa aaaaagggaa
     2641 aacactccct gataaagaga taataacaat tctcaaacaa agcctgctgt ctgtcgaaaa
     2701 attgacactg gaaacaaaag aagagcaaga cgatgttaca ctggttttgc aaaggctgga
     2761 tatcatcaaa cagatgatgg acttgaactc ttctgttaat cctctttcca acctgagctc
     2821 cacactggat gaatcatcgc tgcctgttaa aaaggcacag gactttttca actcttttga
     2881 aacaacatca ataagaacac tacgcgttga ttcaaaaaaa ctggaccgcc ttgtgagcca
     2941 gatgggtgag ttgattatag gaagaataaa acacaaaaaa aacatctccg aacttgaaaa
     3001 catactttcc gaccttacgg agtggagaaa ttttaaccat aaatcacaaa gctttatcaa
     3061 atactatgac agaaaataca tcaactccga agatgccgtt gattattcta cactttcagt
     3121 ttttagcaaa cagatttttt ccatatttca ggaaaactca tcaaaaatta tcaagcttaa
     3181 caacagaatt ttgaatctgc aaaagtcact ggatgaagaa gatacaaaac taaacaccat
     3241 tgttacccaa ctagagagca tgataaaaaa catcagagta ttgcctctgg caacaatatt
     3301 ccatatgttc ccgagaatga taagagacat atcaaaagat acaggcaaag atatagagct
     3361 gcttatttcg ggtagtgaaa ccagcgcaga taagaaggtt atcgaagaaa taaaagcacc
     3421 tcttatgcat atcataagga attcaatcga ccatggcata gaaactcctc aagaacgtat
     3481 tgctgcaggc aaatcgccta aaggcaaaat ctatctgatt gcaaaaagca tgcaaaacaa
     3541 aattatcata gaaattcatg atgatggaag aggtattgac ttacaaaaaa ttgtaaacag
     3601 agctcttgaa aagaacatga ttacccaaaa agaggctcaa tatctctctg cagaacaaat
     3661 tatgaacata atattctggc cgggtttttc tacagaacag gtcgtaacag agctctccgg
     3721 aagaggtgtg gggcttgata ttgtacagac aaaaatctcg cagctaaacg gcacagtaaa
     3781 agtcttttca gtgcccaatc aaggaacaaa aataaccatt gagctgccta tatcaatgtc
     3841 aacgctcaag gcttttattg tagaatgctc tcagcagttt tttgcaatgc caatgacgtc
     3901 cataaaaaat gttatgtgga ttaaagagga agatatctat cttcgaaacg acacaaaatc
     3961 cattattatt gaaggcaaaa ccgttaacct gttttacttg agtgagctta tgaaacttcc
     4021 attaagtgaa gaaagctcaa aaagcaataa aaaaacagtg attttgattg aagtggaaaa
     4081 cagcctcatg ggtataattg tggacaggat tctaggcgat cagaatattc tgcaaaaaaa
     4141 gctcgaccct ccaattataa agctaaaaaa catatccggt ataacaacac tggcaaacgg
     4201 agatgtgtgc cttatcctca atctacccga gctgtacaaa agtacttaca ctcctgttga
     4261 aaaaccgctt attcctgttc cttcttacaa attgagagcc agagaaaaca aagattacaa
     4321 aatccttatt gtggatgatt ctattacaac aagagaactg cttaaaaata ttcttattca
     4381 ctggggttat agttttgaaa tggtgaaaaa ccccaaagaa gcttttgaaa tcttgtacaa
     4441 agaaaatttt gaccttatat tgtcagacat ggaaatgccc gagatggacg gcagtatgtt
     4501 tattaaagaa cttaaaaaca cacctaaatt taaagacata cctgttgtgc tcattacatc
     4561 ctatgacaca gaaagacttg caaaagatat tcctgatatt gatgcattta tcaaaaaatc
     4621 caacttcaat caggattacc ttttagacgt tatagaaaaa cttttgaaat atgaataaac
     4681 tgtctgtata cgaaaaatat tgcaaaaatg aagaacacgc caaagaagtg gaaaaatacg
     4741 cgctgatgat tttgagcgca ttaaaagacg ctgttgaggc ttacaaaaat ataacggaaa
     4801 gagaaacgct ctaccttcag attgcagcac tgctgcatga tatcggatat gttgtagaaa
     4861 aaaaatcaca ccacaaacac gcaatgaacc ttattataca agaagggctt gaaggtttgg
     4921 acaatgaaga aacaaaagtg actgcaaata tagccagata tcatagaggc tctttgcctg
     4981 acgaaacaaa gcacgaaata tacaaaaacc ttacccccca acaaaaaaac acagtacaat
     5041 tgctaggttc gatagtaagg cttgcagacg gttttgacaa acctcataaa aaccttattt
     5101 tgagaatgga agctaaagaa acacctgatg aagtcaactt gtacttaaaa actattggat
     5161 ttaaaccaaa tttgaacatg gcggaaaaga aaaaagacat gcttgagcac acactgcaaa
     5221 agaaaattaa ttttattttt gtttaacagt caattgaaaa tagtgtaatt acgtgctata
     5281 gaataattgg tattttaatt cgaggagaat atatgtttaa aagttcaaac cctcttcttt
     5341 caagaatgga caataatgta caaatgctgg aaggtgcccc tatgacggtt tctggcacaa
     5401 taacaaagac ttttattctt ttgttgattg cggcagtatc agctgcagct gttgtgtacg
     5461 aagcgtttat gggatacgct gataaagtaa tgatgataat gggaattgct ctttttgcag
     5521 gactcggtac aggccttgtg acagcatttg tgccaaaact cgcaaaattt ttagcaccgg
     5581 tttatgcatt tgcgcaaggt gcactgcttg cagcactttc acttattatg gaaacacaat
     5641 tccccggcat tgcaatgcag gcagtagcag caacattttt tactttcttt attatgcttg
     5701 tgctttacag aacaggcgcg ataagagcaa ctgaaaaatt ccgtgcaaca ataatgtctg
     5761 caatgcttac gattcttgtg ctttatttaa tcaattttgt tggtggattt ttcaactttt
     5821 caataccgtt tatcagcggt tactcaaaaa tgggaatcgt ttttagcgta atagttgtat
     5881 tggttgcagc attgagcctt attttagact tcgatttcat tgaacagggc gcacaaaaaa
     5941 tgctgccaaa agactatgaa tggtacggtt cttttggtct gcttgtcact cttgtatggc
     6001 tgtatgtcga aatactccgc cttttatcaa gattgagaaa cgattagttt atcttattga
     6061 aaaaaacttg tgaacctgac ctataagtct tgtatcatgg tatttttcag aaaatttatt
     6121 aaaggtttcc acgattttgt cgtgcgagac ctttatttta tccccatcca tttttggctg
     6181 taaaataaca ggtattttat atttttgtgc aagttttaca cactcatcta tttcaaaatc
     6241 tctgattgtc tcatcaaaaa ccagttttgc aaaagtgtct tttgaatgtt ttttgcaaat
     6301 ctcaagaaaa gcatcatgtt ttgagtacaa atcaccgatt tttgcactgg aatccagttt
     6361 aaaatccatt gaaacaatat caatatactc aatcacttta tcgagcgctc tgtccattgt
     6421 gccgtttgtc tcaagataaa tttttagacc cagttgtttt aaagaaggta aaaattcttt
     6481 taaaaactca tactgcaaca atggttcgcc tcctgtcaga ctgacagagt gcaaaggttc
     6541 aagtttaaat gattttattt tttcgacaag ctgtgcaact gtatagtcgt ctcctttgtc
     6601 aaattccgta tcacaatagt cgcatagcaa attacagccg caaaatctga caaaaagttg
     6661 tctgtatcca atatatgggc cttctccctg cacggaatca aaaatttccg caacttttgc
     6721 agttctagtc atttaaaaga ttctccctga ttttatgagt tgagatgttt ttaagttgtt
     6781 cataaagcgc aacttcttgt actgaagctt cttttgggat ttcaattctt acagtaacaa
     6841 tctggtcgcc ttttttgtta gtttttttat cttccacacc ctgctctgac agcctgaatt
     6901 tttggccggt agaagtgttt ggaggaattt tcatagagac attcccacac agtgtcggta
     6961 cttcgatatt tgcacccagt actgcctcaa acggagtaat tggaatttcg cacaaaacat
     7021 ttgcgccctc atagctaaaa aacctgctct cttnnataca aatctccgtt tctgccgccg
     7081 ttataacctt tgttaccttc gtttgcaatt cttatttttg cgcctttttt tattcctgct
     7141 ggaattttta cattgagttt tttatgaatt gaaacttcac cgctgccttt gcaaagcggg
     7201 cactttgcac cgtttatgaa tcttcttcct tcgcattttg gacagcgttc actgtgcaga
     7261 acattaacgg ttctgtgcgt accagagacg gcctctgaca tttttatgtt tacattaagg
     7321 tttatatccc tgccgttttc aggttttggt tttttggctt ttttgttttt tgcattgtcc
     7381 gaagtaaata acccgtccaa tatattttca aacacttgag aaaacgagct tttatcagtt
     7441 ttgttatcag ccttttgtgt atttttttca ttattttggg cagattttgt ataagtatcg
     7501 tttgtgcttg tataagtatg agttttttct tttgttgtgg tagagcttgt ctgattatag
     7561 gccttttttg cctgcgactg ggtttgtttt tttgaagtat aagagctttc ttttcttata
     7621 ttaaaccctt taataatgtc atactggctt cttttttgag tgtcacagag gatttcatat
     7681 gcttctgtaa tttctttaaa acggacaata ctctcttgag agttgtcatt aacgtcaggg
     7741 tgccaaatac gcgcctgctt gcggtaggca gatttaattt ttgcctcgtc acagtccgga
     7801 gagacaccta aaattgcata taaatctttc tggtaatact ggttcaatgg ccttatccga
     7861 tttcttgccg ctacattgat ataatataat gaagcattct aaaatgtcag catattaatc
     7921 taatctagtg tcgtaagctg ccgaaaactc accgtttccg tcatcttact cgtctaaaac
     7981 attttttatt atttcgggaa tgttttcaac ctcttcataa ctgatatcag ctcttaatga
     8041 aattctaacc cgtgatgagt ctttagcaac agtcggatgg cggataggca gaaggtaata
     8101 tccgtttttg attaactctt tagaaacttt aacagcattt tcgttactgc caagaattac
     8161 aggcacaata tgactttcgc ccatagtttt gagtccgtat gaattaagtt tttcccgcag
     8221 tttttgcgct gttacaagca gctcttttct ttgctgtttc aaattcggga taatttctgt
     8281 aatcatacag taagaaaacg caacattgat ttcaggcagt gctgtagaaa aaataagcgg
     8341 cctgcatttg ttaatcaaat agttaatcaa cacatcatgc cctgcgcaaa aagcacccac
     8401 agagcctaca gctttgccca aagtggcagc atacaagtca atatcagata ggcagccttg
     8461 catttctgca acgccaagcc ccttttctcc gaaaacacca aaagcatgcg cttcatccac
     8521 aacaagcaaa gcattgtatt tcttttttaa atcaataagt ctgttcaaat ctgcaatatc
     8581 accgtccatg ctaaaaagag attccgtaac aatgatgaca ttttcaaact cgtctctatg
     8641 ttctttcaaa agcgattcca aatgttcata atccagatgt ttgtatctga acatttttgc
     8701 atcagacagc ttaataccgt cgagaatgct ggcgtggttg agcttgtcgc aaaagacagc
     8761 atcctttttt gaaagaagag ccgacattat acccacattg gcatgataac cgctgttaaa
     8821 aataagtgct ttgtccttgc gaagcagagc cgcaagaagg cactcgagct ttgcataaac
     8881 ataagagctg ccggtgagca gtcttgatga agctgaaccg agagaaaaat ctgcaatttt
     8941 gaaaaacctg tcaagaacct ctttatcctc tgcaattccc agatagtcgt ttgaagaaag
     9001 gttaaggtat tttttattat cttcaaaaat atatttaccc gcttttttaa aagagcagag
     9061 ttttctctcg cacgagctat cgtgcagctc tttcaattct tttttgtatc tctcaaataa
     9121 acttttcata ttatcctttt aactatataa atgacaaagc cagaagcaaa cttattatca
     9181 aagtcagaat ctgaatgttt gtataaaaat ggaccttttc ataagaggca aagtggccga
     9241 tgataaaagg caaaaacaaa aatatcggaa atatagcagc ataaacagca ttacccagat
     9301 acaaattgct cagcgaaaac cacaaaatag aaataaaata caacgcaaat aacaagctga
     9361 taactacgga aaaataagca taaaatttta ttgcattttc atttctataa agcacaagct
     9421 ttcccagtgc aaaaccaaga atcaaaagca cgtttgtaac aatgatagaa atcaaagaag
     9481 ccggcagctg gtgaataatc tttattaact gtgcgctatc aatcattatg cacccgcact
     9541 ttccataaac gtatcatcaa tcggcggctg tttttctata acagggccaa aatccgaaag
     9601 gctgtttaaa aattctattg atttttcgaa cacaaaatca cgctcattgt ccataacaac
     9661 aaggtggtag ctgttttcaa gctctatata ttttcttata cttgagccta tgttcttgaa
     9721 aacaaattcc gcactctttg tgcttgtcaa atcatcctct cttgcatgca taagaagaat
     9781 aggtgctttt actttgaaca tatttttttg cgtgtatttg gacaatttta aaagctcata
     9841 aatacaagac attggatagt tgtccagagc ttctgtattt cttttttgca gtgctgcaat
     9901 tttctttctc agagtttcgt ttttgaggcc atagggttct ctttcaggaa aagagtaata
     9961 ataccttaaa attgtatgaa cacctattgg catcaaaaaa ttgtaccaag gtattgtcca
    10021 gccgtctaaa aacagagttg tggaaagaga aagaatccct cttacctctc tgtattcgct
    10081 tgcaatagca agagctaata ctgcccccat acaaagaccg ccaaggtaaa cctcgtcgta
    10141 tttttgagta agttctctgt aatgaagcgt agaatcagag taccagtctt cccatcttac
    10201 attttttata ttgatggggc ttgtgccatg gccaggaagg cagtagcaat aaacatcaaa
    10261 gtctgcatca tagagggctt tgcccatttt tttcatttca aaagggctgc ctgtcattcc
    10321 gtggaataac agaacagctc ttttacattt attttcgtgt ataaactcga aatctaaact
    10381 ctgtcccaag ggtcttatcc tattaagcct tttccatgta tctgtcgaat aattgatcca
    10441 taagttcaag agccatgtca atttcttcgt cggaaatata aagctgagga acaagagtga
    10501 tgatattttt gaaatatcct ccgttgttga gaatcaaacc gcattttttg cctttgtaag
    10561 ttaaatcacc cttaagacct gcctcgataa tttcgtcgca aagctctctt gcaggtgtaa
    10621 atctgtctgc ttccgtaact tcaacactca aagcaaaacc aaggccgtta actgtaccga
    10681 tatttttgta tttcttttca agagctttta atccatcgag gaattttgca cctttgcgtg
    10741 caatttcaga ctcgagctct tttctttctt catcaaaaat actcattact tcataacccg
    10801 cacgtgttcc tatggggtta gcagcataag tagagtgtgt tctgccggca gggaatactt
    10861 tcgggttaat caattcttct tttgcccaca taccggccag cggattcata ccgtttgtga
    10921 tagattttgc aaaagtcata gcatcaggtt taaccccaaa gtgctccatt gcccagagtt
    10981 tacctgttct aaagcagccc atctgtactt cgtccaccat aaacagtata ttgtgttcat
    11041 caagaacttt tttcaattct ttaaaatatc ctttcggagg aacaatataa ccgcctgtgc
    11101 caagcaaagg ctctgcaata aatccgccga attcacaatc ttttgtttta gggtcataaa
    11161 caccgttgta ttcgctttca aagagttttg caaactgttt tacgcagtac atattgcaag
    11221 attcgcattt tttgtcatac ggacatctga aacaatacgg aaaaggaaca aaatgagcag
    11281 tgtcagacat gtgaccaaag tgttctctgt atctgtagct tgaagtaacg gctgttgtac
    11341 cgatagtacg gccgtgatat ccgcccataa acgcaaacat tctcggtttt tttgtatagt
    11401 ttctgattaa tttcagcata tcttcgttaa cttgagcacc gcccacgtta aactgtacac
    11461 ggcctttgat accgtatctg tcgaggtttg cttttgcaat tttttctgca aggagagcct
    11521 tgtaatcgta cacaaatctt gatgaaatct gaggcattgt ctgatactgg tcaagtacag
    11581 catttagaac tcttttgttt ttgtagccca agttgcagct tgagtaccac atttgcaaat
    11641 caaggtaggg agtgtctttt ccgtcataca tataagagcc ttcgcagtct ctgaagatag
    11701 tctgatcatc atgataatga acagtatcgc cccaggagca atattcttta tctattgctt
    11761 taatttcttc atcagaaagc ttcatttttg tatctaacat tactctctcc ttttatacgc
    11821 tttttatata gtttttaatt tcatcaaaag atttgaaacc cacaaggtca aaaccatcac
    11881 ggtaatcatt tttagtatct ttacaatact ccaacagcga gcctttggca aatagaatat
    11941 caaccttgcg gctcacacaa aagtctgata acccgtcccc tgcgtacaat acgggctttg
    12001 taacaattct atgatttttt acaacactgc atttacaaac tcctgatttt cgtttgcagt
    12061 tttcgttaaa atgcggaaaa aatgtttgga atctgccatt ttcaaatttg agtttgttgg
    12121 aaaaaatctt tacgccattt atgttatttt ttgcaagaat tctttctata aaataatcaa
    12181 aaccgtctga cactattgta aaatctatat cttcggactt taaatattcc aaaaaatcag
    12241 gaaaagtctc atcaatttct atagactcaa taaattcatc tatagttttt tgctccatca
    12301 aagggaacag ctgcatttgt tcttctatgc actgttttga gccaatagca ccgttcatcc
    12361 atttttcttc gacttcaagc cagtcggttt ttgcataaac gcgtaaaaat ttgtttaggg
    12421 tatcttcttt tgtaatagta ccgtcaaaat cacaaaagaa ttgaaaattc ttcatcacat
    12481 tcctcaagac taaatgtact gttcaagaac agagtacaac tcatttcttt cctcttcatc
    12541 aagttcaaca agaggacgtc ttacatagtt ttctataata cccatttttt taaggcactc
    12601 tttaacaggc acagggtttg gcgccataaa gatttttttg aaaagcggat acaattttaa
    12661 atgcatatcc gtagcttctt ttactttgcc tgatttgtac aggttcaaca tctcatgcat
    12721 ttggttgccg ataatatgag atgcaacaga aattacaccg tgagcaccaa cagaaaccat
    12781 tggcagagta agactgtcat cgccagagta aataacaaag tcatccggac aaaggcgtct
    12841 tgtctctgta ataacgtcca tgtcagcaag gctttgtttt acagcaaaaa tatttttgtg
    12901 ttcttttgca aggtgagcaa ttgtttcggg ctgcatagta atgcctgttc tgccgggaat
    12961 attatacaaa agcacaggca gatcagtaga ctttgcaatt gtagaaaaat gctcaatcaa
    13021 gcctttttgt gaaggtttat tgtaataagg gacaactgac aaaatagcat cagcgccgca
    13081 ttctttagca ttgtttgtag ccataacagc tgtctgtgtg cagttggagc ctgctcccat
    13141 aatgagtttt gcacggccgt tggccacttt ttttacaaat ctgaaaatct caacttcttc
    13201 atcgtgagtc agcgtaggag attcgcctgt tgtaccggca acaagaatgc tctccgtgcc
    13261 tgtggctatc agatgttcaa cgagtttttc cagcgccttg taatcgactt ttctgtcctt
    13321 atccatcggc gtaatcattg ccgtaataat ttcacccgca tcaaaacgca tagccataaa
    13381 aaactctcct tgaaactgtt cttctaatcc cagtataaat tattaaaaac tttaatacaa
    13441 tattttttat tcaacgtaag aacaataacc tttttgaaca aggattttgc ttaggctttc
    13501 gttgcctata taaaactcgc cgacaagggc agcaaaaagc cccagtccgt taggtgcaaa
    13561 atatatatta ccgctgttct cgctgaaaac tttggcaata tattcagcag ctcttgtatt
    13621 ttctctcacg ctttgtctgc gttgtctgac ataggttttt cctgttgagc tttttaaagc
    13681 ataagatctt gaaaattcat gacaatcaag atttgccata aaagcgagtg ttctcatcct
    13741 attgtaaatt atatccattg aaagagcatt gttaacagcc agcacctcaa cgggttcttt
    13801 ttggttccaa acaacaggat ttttattttt tattgcaaat gccggaaggc acatgcctgt
    13861 catcattgtt gttaagatca aagttttaaa tatttttttc atcgagttct ccgcgcaaat
    13921 gccacgtgct ggcacctgta atttttacgt caacaaactc tccgacaagt gctttatctc
    13981 ctctgaagtg aacgattttg ttgtttggag cacgacccgc aagaataatc tcgccgtctt
    14041 tgttttcgta tgattcaaca aggatttcaa aagtttttcc cacgcatttt tcgttggatt
    14101 ttagacaggc ctgtctgttt ttttcgttca gacgggcaag tctttcaaat ttagtttctt
    14161 catctataaa tttgtctgtc cattttgcgg cctttgtttt tacacgcggg gaatatgctg
    14221 cggtgtttga ataatccagc tcaaactcat caattgcact caatgtatca agaaattctt
    14281 cttctgtttc accagggaac cctgcaataa aatccgaagt tattgcaaca tcctcgaaag
    14341 tttcacggat tttttttaca attttgccgt attgctcacg gtcgtaacgg cggttcattt
    14401 cttttaatac gtttgaattg cctgactgca tcggtatgtg gaaaaattcg cacaccttgt
    14461 cacattcttt gactgcctgt atcaaatcat ccgaaatatc tgtcggataa gatgtcacaa
    14521 aacggattct aaacttaccg tcgattttat tcaagtcccg aagaagatta gccaatgtga
    14581 cgtctctgcc atcgtaatca ttgtttgcat ccagtgtttt tccgtagctg tccacgtttt
    14641 gaccgagcag tgtgatttct ttaaatcctt ctgctacagc ctttttagct tctgctataa
    14701 tttctgcggg ttttcggctt ctttcccgcc ctcttgtaaa cgggactata cagtatgtgc
    14761 aaaaattgtt gcagccttcc ataatcggaa tccaggcgtt gaggcttttg gcgcgtttaa
    14821 tttcgtattt cgcctcttct tcgccgtctg tgaatttttt aggtgtttcg tttgttgcac
    14881 atactctttc gccttcattg attcttttta tcaagtccgg cagctcgtat acgttgtttg
    14941 tgccaaacac aagatcaaca tatggaaaac gctttaagag tttttcttta tcctgctgcg
    15001 caacacatcc gcaaaaagcg atttttatct ctttaaacgg tttgccctgt aattcttttt
    15061 ggcgctcatc gtttttccat ttaccccaca cgcccacaag gctgtatgcc ttgtcagcag
    15121 acagctggcg gattgaacag gtgttcacga taagcaaatc cgcatcttta gattcttctg
    15181 tatgctcata cccgaaatgc gaaagcatac cgagtattct ttccgtgtca gacttgttca
    15241 tctgacaccc catagtttca atataaacct ttttcaaaaa attcttattt tccataaaaa
    15301 aaattatatg aaaaaaacag aagaaataac attatttttt ggatggatta aaatctattt
    15361 ttaagacagc tgcacaaccc agtaaatggt tagattcaaa gtcagaaagt ttatatttag
    15421 cacacgccat tttataatct ccaattaaag aaatata
//
LOCUS       DABS01000085            4236 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_21699, whole genome shotgun sequence.
ACCESSION   DABS01000085 DABS01000000
VERSION     DABS01000085.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4236)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4236)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4236
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..725
                     /gene="tgt"
                     /locus_tag="CPT85_03355"
     CDS             <1..725
                     /gene="tgt"
                     /locus_tag="CPT85_03355"
                     /inference="COORDINATES: protein motif:HMM:TIGR00430"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="DAB24548.1"
                     /translation="SMEIQQDIGADIAMAFDECAPYPCSYEEAKNAMERTHRWLERCF
                     NAHTRDDQALFPIVQGAFYDDLRQESARVISSFDAVGYAIGGVSVGEPADVKNHFVGL
                     TAPLLPRLKPRYLMGVGTPEDLLDGILRGIDMFDCVLPTRNARHGSFFTNDGRKIIKN
                     KEFERESSPLDKECNCYTCRNHTKAYVRHLYRAGEATAAILMSIHNTQFLIDLVKEAR
                     KAILENRYEEFYREKMTRLFPL"
     gene            complement(720..1520)
                     /locus_tag="CPT85_03360"
     CDS             complement(720..1520)
                     /locus_tag="CPT85_03360"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24549.1"
                     /translation="MDKKKTFKQLTAVFVIGCMIQAGAFAAQNQYSATQPPMMKPAVX
                     QSNSFVKNIKANNNSKRKIEVYTDKQGNPISKEQKERSEELKKIYKGVTKDEKLMEAM
                     ELMKGNSMSEFSRKALLGNNLSGKPMMVSFEDLSRFGQTYANFDALGWKKKDRLYIYI
                     NKKHEDAPAPALAAVLSHEALHQDDFNSLNEETYAWTMEAAVWTKLSEKDPKYNDSMH
                     PLVVRENTLKKLFIKGNYTSKYIRKTVFSNPGYSNLPSRSPGFEDDNL"
     assembly_gap    1389..1390
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1684..2553)
                     /locus_tag="CPT85_03365"
     CDS             complement(1684..2553)
                     /locus_tag="CPT85_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_846207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="DAB24550.1"
                     /translation="MTITAAMVKELREKTGAGILDAKKALVENDGDMEKAMEFLRQKG
                     IASADKKMGRIAAEGLVGSYVEGNVGAIIEVNCETDFVAKNNEFKELVSNLAKLIVAK
                     RPADVDALLATTCDKCGKKVEDIIKEKVATIGEKITVRRFDIVEGNPATYIHNGKIGV
                     LLNTDCADEALEKDICLHIASNAPEFVSREEIPQSVIDEETRIEMGKEDLASKPENIR
                     AKIVEGRINKLMASRCLLEQPFVKNPDQTVAQLCEGKLNVKCFIRYVLGEGLEKRQDN
                     FAEEVANQIAGNN"
     gene            complement(2691..3455)
                     /gene="rpsB"
                     /locus_tag="CPT85_03370"
                     /pseudo
     CDS             complement(2691..3455)
                     /gene="rpsB"
                     /locus_tag="CPT85_03370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010530653.1"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
     assembly_gap    2864..2903
                     /estimated_length=40
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3662..4204)
                     /locus_tag="CPT85_03375"
     CDS             complement(3662..4204)
                     /locus_tag="CPT85_03375"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24551.1"
                     /translation="MLCTAMNVFAEPYAIVPVGCPVQGAPCAQNQPCNCGKPECPKCC
                     DSAPVFNSCEEIQAWKIKFCEKRACMYDKLCLTQEQRVKAKCIDDKYFDEIAPLKMCC
                     KQEKMKLKEMECKKCKWKVKHEQKQKIKDLKSEIKEKKKEHKECFMQILTSCQKDKYK
                     ELMKDKCKKHKKAKCECGCK"
BASE COUNT         1090 a          833 c          751 g         1520 t
ORIGIN      
        1 tatcaatgga aatacaacag gatattggtg ctgatattgc aatggctttt gatgaatgcg
       61 ctccttatcc atgttcgtat gaagaagcta aaaacgccat ggaacgcaca caccgctggc
      121 tcgaaagatg ttttaacgct catacaagag acgaccaggc gctatttccc attgttcagg
      181 gtgcttttta tgatgatttg agacaggaaa gcgcaagagt gatatcttca tttgacgctg
      241 ttggctacgc tattggcggt gttagcgttg gagagcctgc tgatgtcaaa aaccactttg
      301 tcggcctgac tgctcctctt ttgccaaggc tgaaaccaag atatttaatg ggagttggaa
      361 cgccggaaga cttgcttgac ggtatactaa gaggcataga tatgtttgat tgcgtattgc
      421 cgacaagaaa cgcgcgccac ggttcattct ttacaaatga tggaagaaaa atcattaaaa
      481 ataaagaatt cgagcgggag tcttccccgc tcgataaaga gtgcaactgc tatacctgcc
      541 gcaaccatac aaaagcttat gtccgacacc tgtaccgtgc aggcgaggca acagctgcta
      601 tattaatgag catacataat acccagtttt tgatagacct cgttaaggaa gcaagaaaag
      661 ctattcttga aaatcggtac gaagaatttt acagagaaaa aatgacaaga ctctttcctc
      721 tataagttgt catcttcaaa cccaggtgat cttgagggca gatttgaata accaggattt
      781 gaaaaaactg tttttctaat atatttgctt gtgtaattgc ctttgataaa cagttttttt
      841 agtgtgtttt ctcttaccac aagggggtgc atgctgtcgt tgtattttgg atctttttca
      901 gaaagttttg tccatacagc tgcttccatt gtccaggcat atgtttcttc gtttaaagaa
      961 ttaaaatcgt cctgatgcaa agcctcatgg gaaagcactg ccgcaagcgc aggcgcagga
     1021 gcgtcttcgt gttttttgtt gatgtaaata taaagcctgt cttttttctt ccatcccagt
     1081 gcgtcaaagt ttgcatatgt ttggccgaat ctacttaaat cttcaaaact taccatcatg
     1141 ggtttgcctg ataaattgtt gccaagcaaa gcttttcttg aaaattcaga catggagttt
     1201 cctttcatca actccatcgc ttccatcaac ttttcgtctt ttgttactcc tttgtagatt
     1261 tttttgagct cttcagagcg ttctttctgt tctttggaaa tagggtttcc ctgtttgtct
     1321 gtgtagactt cgatttttct tttagaattg ttgtttgctt taatgttttt tacaaagctg
     1381 tttgattgnn ttacagcagg tttcatcatg gggggctgtg ttgcggagta ttgattttgt
     1441 gctgcaaaag caccggcttg aatcatacat cctattacaa atactgctgt taattgttta
     1501 aaagtctttt tcttatccaa taatcctcac ccgttctcaa ctatccatac agaatattat
     1561 taattattat tttttcaata tcaaatcact aagcggttat gaaaagtttt gtaaagttga
     1621 gttttttatt acataaaaaa gccccctgaa aatcagagag cttttttagt cttatacttt
     1681 aacctagttg ttgcctgcga tctggtttgc aacttcttct gcaaagttgt cctgtctttt
     1741 ttcaagacct tcacccaata cgtagcggat gaagcattta acattcaact tgccttcaca
     1801 aagttgtgca actgtctggt ctgggttttt aacaaacggt tgttctaaaa gacatcttga
     1861 tgccataagt ttgttaattc ttccttcaac gattttagct ctgatgtttt caggtttgct
     1921 tgcaaggtct tctttaccca tttcgattct tgtttcttca tcaataactg attgagggat
     1981 ttcttctctt gaaacaaatt caggagcgtt agaagcgatg tgtaagcaga tatctttttc
     2041 aagagcttcg tcagcgcaat ctgtgtttaa caatacaccg attttgccgt tgtggatgta
     2101 agttgcagga ttgccttcaa caatatcaaa tcttcttaca gtgatttttt caccgatagt
     2161 agcaactttt tctttgatga tatcttcaac ttttttaccg catttgtcac aagttgtagc
     2221 aagcaatgca tcaacatcag caggtctttt tgcaacgata agttttgcaa ggttagaaac
     2281 caattctttg aattcattgt ttttagcaac gaagtcagtt tcgcagttaa cttcgataat
     2341 agcaccaacg ttgccttcaa cataagagcc taccaaacct tcggcagcga ttctgcccat
     2401 ttttttgtca gcagaagcaa tacctttttg acgaaggaat tccatagctt tttccatatc
     2461 accatcgttt tcaacgagtg cttttttagc gtcgagaata cctgcaccgg ttttttctct
     2521 gagctctttt accatagcag ctgttattgt cattttgtaa tcctctctgt attttttata
     2581 ttgtcaactg actccgaaaa acggaagttt accaagtaca tggggtcact tccgttttct
     2641 taataagtca ttagcgagtt tagagaaaaa tctccttgtt cgcaatttaa ctatgcttca
     2701 acagaagctt cttctttaac ttcttcagct gtaacaccgg catcttcagc tttgatagtt
     2761 tcagctttag agcctacagc tttgttttct ctcaattgtt tgccttccaa aacagcatca
     2821 gcaagtttag aagcaatcaa tctgatagaa cggatagcat catnnnnnnn nnnnnnnnnn
     2881 nnnnnnnnnn nnnnnnnnnn nnngattaca ggaatgtgta atttgttggc ttctgcaata
     2941 gcaatgtctt cttttttctg gtcaacaaca aagataatgt ccggcatacc gcgcatttct
     3001 ttgataccgc ctaaagtttt agacaatttt tcaagttttt tagtcatttg aacaacttct
     3061 tttttaggaa gcttttcaat gtggcctgaa tttacgaagt cttcaagctc tcttaattta
     3121 ttaactctgc ctctgatagt ttcaaagtta gttaacaaac cgcctaacca tcttctgttg
     3181 atgtaataca tgccgcatct tgttgcttct tgcgcaacaa cttctgtagc ttgtttttta
     3241 gtacctacaa aaagtacgtt tttacctctt gcagcaaatt cttttacgat gttgtaagct
     3301 tcatctaatt tatcggaagt ttttctcaaa tccaatacat agattccgtt tcttgcaccg
     3361 taaatatacg gtttcatttt ggggttccat ctttgtgttt ggtgtccgaa gtgtacacct
     3421 gcttcgagta aatcaatcat tgatgctacc ggcatctttt tctccttttt tctacgaact
     3481 ttaacctact aagcgggttt tgctttggct ttttgcctca gcccctacgt tttcagtata
     3541 aaattcaatt actatactac atataaaatt atataccaaa caaaacgtat gccaacatgg
     3601 ggtttagggt ttatgaatat tgcttaacat aaaaagagac ggacttgccg tctctttttt
     3661 gttatttgca accgcattcg cattttgctt ttttatgttt tttgcatttg tctttcatta
     3721 attctttgta tttgtctttt tggcagcttg tcaaaatttg cataaaacat tctttgtgtt
     3781 cttttttctt ttctttaatt tcagatttca aatcttttat tttttgtttt tgctcatgtt
     3841 ttactttcca tttgcacttt ttgcattcca tttctttgag cttcattttt tcttgtttgc
     3901 agcacatttt taacggtgca atttcgtcaa aatatttgtc atcaatgcat tttgctttta
     3961 ctctttgttc ctgtgtaagg caaagtttgt cgtacatgca tgctcttttt tcgcagaatt
     4021 ttattttcca tgcttgaatc tcttcacagg aattaaaaac aggtgcgctg tcacagcatt
     4081 ttgggcattc aggttttccg caattgcagg gctgattttg tgcacacggt gctccttgaa
     4141 caggacaacc gacaggaaca attgcataag gctctgcaaa tacattcatt gcagtgcata
     4201 acatagccgc tgtaacaaaa actgatgctc ttgaaa
//
LOCUS       DABS01000086            4005 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_36844, whole genome shotgun sequence.
ACCESSION   DABS01000086 DABS01000000
VERSION     DABS01000086.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4005)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4005)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4005
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..1862
                     /locus_tag="CPT85_03380"
     CDS             <1..1862
                     /locus_tag="CPT85_03380"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24541.1"
                     /translation="QTQSVSTPVLKEVKDAKVYVVADGKDDGKISGAQKFANFAKGAG
                     NFFKGMFCGKDGKFSLLQTAKTVGLVALGFAVPAIGIGMLAVGGAMSVYSLGKGIVKA
                     NAAKTDAEAETAWQNIGEGTTGVVMTAVGAKALKTSKAATAAEALRYKGIKGYGRALK
                     DVYVDAGKGIKQGYTHVKENGITSSLRTAKDVSKDYITSSWEGRFRSTNAKNNAKSRM
                     EAAYDKQVLKHETRILELEQKIANSKNAKKSAEWRAEITELRGQIADIIKAKSEIPET
                     PSTAFSKTRIRNINKNINEKNAEIAQIRKDNPTIDSLIQQRADLKRNYPAEVARFDNN
                     NPQVAKLLKLEKDVNTLKNLKQRVQSNPDINGYRQNQIDYYTKLEAYAKAQAKKSKGA
                     EKTKWESIQKQAGQRVAEHKQFRYIEQAQENALRANKEIARVKDLLKKVEDEIKVTKD
                     AEKLTDLNIKKAKYEAEISANKMQIQTAKNQLRHGYKFENITSYIKENHKPIGYPTMA
                     VASRDIEEVATYDPQDIQAMMYGFSSAAEMEAALKAEGSQGAQEALMAAQEYAAANTQ
                     AQAKTTAKSTAQTTSNVTNPYTQYSLYSQMNMTPPMGTGLEFQDVYXPYAGLI"
     assembly_gap    1839..1840
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1905..2678)
                     /gene="lgt"
                     /locus_tag="CPT85_03385"
     CDS             complement(1905..2678)
                     /gene="lgt"
                     /locus_tag="CPT85_03385"
                     /inference="COORDINATES: protein motif:HMM:TIGR00544"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="DAB24542.1"
                     /translation="MQSPPSSVLLNIGGFNLHYYGLIMFFAIITALFVMHCVAKKFYK
                     DVDTDTLLDILPIIILCSILGARLYYVIMDFSYYNKHLAEIPAVWQGGMSIHGGIIGG
                     VLSGIIVAKVKKISFLKYADVFSYGLVLGQAVGRFGNYFNCEAFGKPCSIPFLKLYIP
                     PAHRPFGYESIEYYHPAFLYESLWNVFVFLILFFVVRKIPNIKEGTIFFAXRIIVEWC
                     RMDSVLNIGNIAIAQIVSAVVIVLSAIFLIVIYKRKGKT"
     assembly_gap    2046..2048
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2678..3328)
                     /locus_tag="CPT85_03390"
     CDS             complement(2678..3328)
                     /locus_tag="CPT85_03390"
                     /inference="COORDINATES: protein motif:HMM:PF13181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="DAB24543.1"
                     /translation="MKKVVLLITILFVSVISTACINNLAVQELNNKAKEYMANGETEK
                     AICRLRSSIDLDTSIFETHYNLGVALIEVKEYAEAQASLENAIKLKPDFADSYYSLAM
                     AMENQADDIINGRTNEDKTLNAEQTEETAQQADAKAKKELTEAEKNKVIELLNGAVDN
                     YNKYIVKKPDAEDKDKVEEQIRFVNEQIGQYNSLRSNAMPDVENASTSTNLEGSED"
     gene            3457..3729
                     /locus_tag="CPT85_03395"
     CDS             3457..3729
                     /locus_tag="CPT85_03395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002828988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24544.1"
                     /translation="MSNDEKVVSLSRAKHENDTKKEEDNNQGFQPVYCSFCGRPNTKV
                     VKMVKGPGVNICSECTMIAVQYLILEDKMPSGEAQKILDAFWAKLD"
     gene            3744..>4005
                     /locus_tag="CPT85_03400"
     CDS             3744..>4005
                     /locus_tag="CPT85_03400"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24545.1"
                     /translation="MPENKHPENKLPENKLQIRAKLLSAIINMQNNSQDRAYIKKTLE
                     ELNAIVDKDAVLDILNREFLKENSQMRDYTITFLISELTDPQK"
BASE COUNT         1490 a          728 c          702 g         1080 t
ORIGIN      
        1 tgcagactca atcagtttca accccagttt taaaagaagt aaaagacgcc aaagtttatg
       61 ttgttgccga cggcaaagac gacggaaaaa tttccggagc acaaaaattt gctaattttg
      121 caaaaggtgc aggcaatttc tttaaaggaa tgttctgcgg caaagatggt aaattcagtc
      181 tgcttcaaac agcaaaaact gtcggcttag ttgcattagg ctttgctgta cctgctatcg
      241 gtattggaat gcttgcggtt ggcggagcta tgagtgtcta ctctcttggt aaaggaatcg
      301 taaaagctaa tgctgctaaa acagacgcag aagctgaaac tgcttggcaa aacataggtg
      361 aaggcacaac aggtgttgtt atgacagcag tgggtgctaa ggctctaaaa acaagcaagg
      421 ctgcaactgc tgcagaagca ttaagatata aaggaattaa aggttatgga agagccttaa
      481 aagacgtata tgtagatgct ggaaaaggta ttaagcaagg ttatacacat gtcaaagaaa
      541 acggaatcac aagctcttta agaacagcaa aagatgtttc aaaagattac atcacaagca
      601 gctgggaagg ccgattcaga tcaactaatg ctaaaaataa tgcaaaatca agaatggaag
      661 ctgcttatga taaacaggtg ttaaaacatg aaacaagaat tcttgaactt gaacaaaaaa
      721 ttgcaaactc caaaaatgct aaaaaatcag cagaatggag agcagaaata acagagcttc
      781 gcggacagat tgctgacatt atcaaagcaa aatcagaaat tcctgaaact ccgtctacag
      841 cattttcaaa aacaagaatt agaaatatta acaaaaacat taatgaaaag aatgcagaaa
      901 ttgcacaaat aagaaaagat aatccgacaa ttgattcatt aattcagcag cgtgcagatt
      961 tgaagagaaa ctatccggca gaagttgcaa gatttgataa caacaaccct caagttgcaa
     1021 aactgctcaa acttgaaaaa gatgtaaata cactcaaaaa ccttaaacaa agagttcaat
     1081 caaatcctga tataaacgga taccgtcaaa atcaaattga ctactataca aaacttgaag
     1141 catatgcaaa ggctcaggct aaaaaatcaa aaggtgctga aaaaacaaaa tgggaatcta
     1201 tccaaaaaca agcaggccaa agagttgcag aacacaaaca attcagatat atcgaacagg
     1261 ctcaagaaaa cgcacttcgt gcaaataaag aaatcgcaag agttaaagat ttgcttaaaa
     1321 aagttgaaga tgaaatcaaa gttacaaaag atgctgaaaa gcttacagat ttaaatatca
     1381 aaaaagcaaa atatgaagca gaaatctcag caaacaaaat gcagattcaa acagctaaaa
     1441 atcagttaag acacggttac aaatttgaaa atatcacttc ttatataaaa gaaaatcata
     1501 aaccgatcgg ttacccgaca atggctgtag cctcaagaga tatcgaagaa gttgcaacat
     1561 atgaccctca agatatccag gcaatgatgt acggtttctc ttcagcagca gaaatggaag
     1621 cagcactcaa agcagaaggc tcacaaggcg cacaagaagc actgatggca gcacaagaat
     1681 atgcagcagc taatactcaa gcacaagcta aaacaacagc taaatcaaca gcacagacaa
     1741 catctaatgt aacaaaccca tacactcaat acagcttgta ttcacaaatg aatatgactc
     1801 ctccgatggg tacaggtctt gaattccaag atgtttacnn accgtatgca ggccttattt
     1861 aacaaataac taatacatta catctattac aaaaaaaggt aagattaagt cttacctttt
     1921 cttttgtata ttacgattaa aaatattgcg ctcaatacaa ttacaacagc cgaaacaatt
     1981 tgtgcaatcg caatgtttcc tatgtttaaa acactgtcca ttctgcacca ttccacaata
     2041 atccgnnntg caaaaaatat tgtcccttct tttatgttcg gtatttttct tacaacaaaa
     2101 aacaatatta aaaatacaaa aacattccat aatgattcgt aaagaaaagc tgggtgataa
     2161 tactcaatgc tctcataccc aaaaggcctg tgagccggcg ggatatacag ttttaaaaac
     2221 ggaatggaac aaggtttgcc aaaagcttca cagttaaaat aattgccaaa tcttcctact
     2281 gcctgaccaa gcacaagccc gtacgaaaaa acatcggcat attttaaaaa tgaaattttt
     2341 tttacttttg caacaataat acctgacaac actccgccga taatacctcc gtgaatagac
     2401 atcccgcctt gccatacagc gggaatctct gctaggtgtt tgttgtagta cgaaaaatcc
     2461 attattacat aataaagccg tgctccaaga attgagcaca gaattattat tggcagtata
     2521 tcaagcagtg tgtctgtatc tacatctttg taaaactttt tggcaacaca atgcattaca
     2581 aaaagagctg ttattattgc aaaaaacata atcagcccat aatagtgcag attaaaacct
     2641 ccgatattta ataataccga agatggaggt gattgcatta atcttcgctg ccttccaaat
     2701 ttgttgatgt tgatgcattt tctacatcag gcattgcatt ggaacgcaat gaattgtact
     2761 gtccgatttg ctcgttaaca aatctgattt gttcctctac tttgtcttta tcttctgcat
     2821 caggtttttt aacaatatat ttgttgtagt tgtcaacagc accgtttaag agctcaataa
     2881 ctttattttt ttcagcttct gttaactctt tttttgcttt tgcatctgct tgttgcgcag
     2941 tttcttctgt ttgttcggca tttagagttt tatcttcatt tgttctgccg tttataatgt
     3001 catcggcctg attttccatt gccattgcaa gagaataata tgagtctgca aagtcaggtt
     3061 tgagttttat tgcattttcc aaagatgctt gagcctctgc gtattctttt acctcaatga
     3121 gagcaacgcc aaggttgtaa tgtgtttcaa aaatacttgt atcaaggtca atactggagc
     3181 gcagacgaca gattgctttt tctgtttctc cattggccat atattctttt gccttattgt
     3241 taagctcttg tactgcaagg ttgttaatac aagctgtaga tataacagag acaaaaagaa
     3301 tggtaattaa taaaactact tttttcatat tataaaactc taattcaaat tataaatttt
     3361 aagcctaact tgctaacata ataaacaaaa tgaaaatatt tggcaactct cttaaaataa
     3421 gatacaataa acgaagtaga taaggaactt gaagacatgt caaacgatga aaaagtagtg
     3481 tcactctcaa gagcaaaaca cgaaaatgat actaaaaaag aagaagataa taatcaggga
     3541 tttcagcctg tatattgcag tttttgcggc agacccaata caaaagtcgt aaaaatggtt
     3601 aaaggcccgg gtgtaaatat ttgctcggag tgtacaatga tagctgtaca ataccttata
     3661 ctggaagata aaatgccatc gggcgaggcg caaaaaattc ttgatgcgtt ctgggcaaaa
     3721 ttagattagc ggagcttttg taaatgccgg aaaacaagca tcctgaaaat aaattacctg
     3781 aaaataaatt acagattaga gcaaaactcc tatctgccat aataaacatg caaaacaact
     3841 ctcaagacag agcttatata aaaaagactc ttgaggaatt gaacgcaatt gtggacaaag
     3901 acgctgttct tgatattttg aacagagagt ttttaaaaga aaactctcaa atgcgtgatt
     3961 atactatcac atttttaatt tcagagctca cagatcccca aaaag
//
LOCUS       DABS01000087            6545 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_10859, whole genome shotgun sequence.
ACCESSION   DABS01000087 DABS01000000
VERSION     DABS01000087.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6545)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6545)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6545
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..417
                     /locus_tag="CPT85_03405"
     CDS             <1..417
                     /locus_tag="CPT85_03405"
                     /inference="COORDINATES: protein motif:HMM:PF03692.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24526.1"
                     /translation="LYKVIKIFLQYLKFYFDKIFTSKYKIEGKCNGCGACCKNIVFMI
                     ENDYVRKEEQFEELKKFDKKYLHFDIAGKNEKGVLLFKCKSLDENNKCRDYFLRSIYC
                     RAYPNVTDKIRLGGCETFDTCGYKIKINKNFKEYLR"
     gene            640..1149
                     /locus_tag="CPT85_03410"
     CDS             640..1149
                     /locus_tag="CPT85_03410"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24527.1"
                     /translation="MLGATALATQPFIDLKNKDVDAETRKTSVARTLAKIVAGTLVGV
                     AVRQAGISFVRKYSQYDPNLCSGLVSSIKPKKGESFFVPMFEKVAGASSTNEKSIFPI
                     AADKLEKKFELYRKAMGTFVATIAMIGTNFLLDAPLTKYFTGVFQKSLANVKLDENPV
                     PKKEAEVKQ"
     gene            1149..1700
                     /locus_tag="CPT85_03415"
     CDS             1149..1700
                     /locus_tag="CPT85_03415"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24528.1"
                     /translation="MPAPKFVNKFIQYMFDTYSKDGGKLLVHLGALGWVFSSAAQLVV
                     VATDKNIDKNKKKFLLPQEGADAAVNVVMYYSICDIIKKGADKLVEKGKLLTDDVAKA
                     LCKIKGYDPKKDINAWNNMFTEAERKMKLTERLAEPNKLNFMKSLPKSEQIKIMPXXX
                     NLKATKTTLVRWLQCWHLCLRVI"
     assembly_gap    1619..1626
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1673..1876
                     /locus_tag="CPT85_03420"
     CDS             1673..1876
                     /locus_tag="CPT85_03420"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24529.1"
                     /translation="MASVLACNIVTPYVRNKVASKSQQYLCKQEAKEVRKTQIKENIT
                     MKNPLPASFKAFNNYNSFGNIKI"
     gene            1942..3213
                     /locus_tag="CPT85_03425"
     CDS             1942..3213
                     /locus_tag="CPT85_03425"
                     /inference="COORDINATES: protein motif:HMM:PF04413.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24530.1"
                     /translation="MLFFSFLYNLVFILAAIIFLPVILIALVLVPKFRAGFWTKFGFY
                     NIKLNHDKKTIFFHAVSVGEVNAVETLIKKTREAFPDSNIVLSTTTKTGQEIAHKKLG
                     NTVDTITYFPFDFFFSVNSFLNSIKPDKIIIAETEIWPDFVYLAKRRNIPVYIVNGRL
                     SPRSYKGYKRFAFFFKPVFSQYKGIFMQTHGDVERILNVGAPNDITKFMGNLKFDIKP
                     TMNSEQITELAQDLKLNGARMIAAASTHKGEDEIILDAFKQLKKEFCDIKLLLAPRHP
                     ERYEKVEQLIAQTGFAYGKRSNNDTFENNDIIMLDTMGELMKMFSVCHFAYIGGSFSS
                     TGGHNPLEANIWGKPVVSGECVFNFKDIYEFLTRSDAAKLSATPEELTNDMRRLLTDN
                     DFYNKACADTSKIFEENSGAVDFVINVLNEA"
     gene            3240..5735
                     /locus_tag="CPT85_03430"
     CDS             3240..5735
                     /locus_tag="CPT85_03430"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24531.1"
                     /translation="MEQSFLKNSLLLNSLKSSLSAAVQPEKLDEMLAFYNNKDKQICF
                     VEGDAGSFKTELFKESRRFLTDNTLVFGFRCFEGTTLDDIFLSFFEDLKRYAQEKKVS
                     FTKIETNSLSQRIIKYLSSINLPCVILIDSLEEVFNKQNQSEKDEIIRFIKHLHSMNK
                     FKIVLISSYFTEEFDDLSDASVCIKTEPYTKEQILSVIPDLSPDDLDKLYALTGGNRN
                     YVYITSNIAVTLNTSAGALLEEFETKRVSFVDFILQKLITFVTEKVKKSLYYLALVNE
                     PISGEYLIKQGFFTQEQLNYVVEKGLVSNEYNSVYVKNYLKKYLIRIIAHLDKIKIHT
                     FWRDFYSSQLPLKPKDRVILISRNTMRSQIEYHSGFIIQQRQEADNTDMSLMSYLNSN
                     LTAWNIKNTNIKDDTEEKKERPTPPKSISDKEKRFEKYELTKDEISLLSVPVDLRKQE
                     EHAAKQQLYRTFEQKEDALKQEKKQKSLPQLYNSAKELEDSHDFETAFVLYYQAWQLV
                     DDTDFKDYEPLLLERLAVCAKRMNKTMEAIDFYNRLTELYASLEQIDKMNEVRLNIAQ
                     IYKETFKLNHARVIYENFINKKSTASNSILARSYIELAGIEEDSANTEKAVEYYKKAF
                     AIADEISNTKEKLDAPILAQAYFKYALILDDFSQTQAALDFYQRSIRTAKEGNIYLSA
                     AYTNVGQIIREQGNPKKAADYYKMALKTDIANSNYEGVYYICLKLARLSEEIALESVA
                     DWLLKSLSAAKRTKENIYITNAYLETGDYYFDKGDNQKALKAFLLAKKSLEKYEHSQE
                     SEQSIELRLNDLKSILPRNIIDKVIQDVENNGR"
     gene            5725..6444
                     /gene="rsmG"
                     /locus_tag="CPT85_03435"
     CDS             5725..6444
                     /gene="rsmG"
                     /locus_tag="CPT85_03435"
                     /inference="COORDINATES: protein motif:HMM:TIGR00138"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="DAB24532.1"
                     /translation="MEDKHFTLIEQLIGEELPKLTKERLQNFEQLFKIYNSHTNLVSK
                     NDEKVLFEKHIYDSLCLALFFKKFNINTSAKILDVGTGGGFPSLPLAIVFPQLQIYPL
                     DSIAKKIGFIEFVQKELRLDNLHTMCKRAEELPQEMKGYFDVVTSRAVASLNTLLEYT
                     VPFACSTGFVVAYKSKNADEELQNAKNAISVLKCEAVQRIKYELPQIQEHDRELIIFK
                     KTGKTPLLYPRKSGQAKKTPL"
BASE COUNT         2330 a         1048 c         1185 g         1974 t
ORIGIN      
        1 ttatataaag tgataaaaat ctttttacag tatctgaaat tttattttga caaaattttt
       61 acctctaaat acaaaataga aggcaaatgc aacggctgcg gagcatgctg caaaaatatt
      121 gtatttatga ttgaaaatga ctatgtaaga aaagaagaac agtttgaaga gcttaaaaaa
      181 tttgataaaa aatatttgca ttttgatata gctggtaaaa acgaaaaagg cgttttgctt
      241 tttaaatgca aatcattgga cgaaaataac aaatgccgtg attatttttt acgttcaata
      301 tattgccggg catatcccaa tgtaaccgac aagatacgcc ttggcgggtg tgaaactttt
      361 gatacttgcg gatataaaat taaaataaac aaaaatttta aagaatattt acgttaaatt
      421 ttttgtttaa aaaccttaac aaaacaggtt tttttgtaaa ttttgaaact tgttttgttt
      481 tacatgactt gtgaagtgta gccaaaatct gttttattta gtaaaatagg taagctggga
      541 aaatgaaagg ttattcctgc cttgatcatt agtaacaaaa tagtaaaaca agccctcgat
      601 tggacgggcc gtaagattca ctctcctgag cagcgactgg tgcttggtgc tacggctctt
      661 gctacacagc cttttattga tttgaaaaac aaagatgtcg acgctgaaac aagaaaaact
      721 tccgttgcaa gaacccttgc aaaaattgtt gccggtacgc ttgtgggcgt agctgtcaga
      781 caggccggta taagctttgt aagaaaatat tcccagtatg acccaaattt gtgcagtgga
      841 ctcgtttcaa gcattaaacc taaaaaaggt gaaagcttct ttgtaccaat gtttgaaaaa
      901 gttgcgggag catcttctac taacgaaaaa tcaattttcc ccatagctgc tgataaattg
      961 gaaaagaaat ttgaactcta cagaaaagca atgggcactt ttgttgctac tattgcaatg
     1021 ataggaacaa acttcttgct tgatgcacct ttgacaaaat actttaccgg agttttccaa
     1081 aagagtcttg ctaatgtaaa attagatgaa aatcctgtac ccaaaaaaga agcggaggtt
     1141 aaacaataat gcctgcgcct aaattcgtaa ataaatttat ccaatatatg tttgatacct
     1201 actcaaaaga cggaggcaag ctccttgtac acttaggtgc actgggatgg gtattcagct
     1261 ctgctgcaca gcttgttgtt gtggcaacag acaaaaacat tgataaaaac aaaaagaaat
     1321 tcctccttcc ccaagaaggt gctgatgctg cagtaaacgt tgttatgtat tattcaatat
     1381 gtgacattat caaaaaaggt gctgacaaac ttgtagaaaa aggaaaactc ttaacagatg
     1441 atgttgcaaa agcactttgc aaaataaaag gctatgaccc caaaaaagat ataaatgcct
     1501 ggaataatat gttcacagaa gccgaaagaa aaatgaagct tacagaaagg cttgctgaac
     1561 ccaataaact caactttatg aaatcgcttc ctaaaagtga gcaaataaaa attatgccnn
     1621 nnnnnntaaa tttgaaagcc acaaaaacaa cgttggtacg gtggctgcag tgttggcatc
     1681 tgtgcttgcg tgtaatatag ttacaccgta tgtaagaaac aaagttgctt caaaatcaca
     1741 acaatatttg tgcaaacagg aagcaaaaga agtaagaaaa actcaaatta aagaaaatat
     1801 tacaatgaaa aatcctttgc cggcttcttt caaagctttt aataattata actctttcgg
     1861 caatattaaa atatagtaat tgaataacca atttgttttt tatagactta agaaaagtat
     1921 cggaatttgg agattaggag tatgttattc tttagttttt tatacaatct tgtttttatt
     1981 ttagccgcaa taatttttct ccctgtaata ttaattgcat tggtacttgt gcccaaattt
     2041 agagcgggtt tttggacaaa atttggcttt tacaatatta aattgaatca tgacaaaaaa
     2101 actatatttt ttcacgctgt ttccgttggc gaagtaaacg ctgtggaaac tcttataaaa
     2161 aagacaagag aagcttttcc tgattctaat atcgttcttt ctacaacaac aaaaacaggg
     2221 caggaaattg cacataaaaa actcggcaat accgttgata ccattactta ttttccattt
     2281 gatttctttt ttagtgtaaa ttccttctta aacagcataa aacccgataa aattattatt
     2341 gcggaaacag aaatttggcc tgattttgtt tatcttgcaa aaaggagaaa tatccctgtt
     2401 tatattgtta acggcagatt gtctccacgc tcatataaag gttataagcg atttgctttc
     2461 ttttttaaac cggttttttc ccagtataag ggtatcttta tgcaaacaca cggtgatgtg
     2521 gaaagaatcc tcaatgtcgg tgcgccaaac gatataacaa aattcatggg gaatttgaaa
     2581 tttgatatta aaccgaccat gaacagtgaa caaatcacag agcttgcgca agatttaaaa
     2641 ttgaacggag caagaatgat agctgctgca agtactcata agggagagga tgaaataatt
     2701 ctggatgcat ttaaacagct taaaaaagag ttttgtgaca taaaattgct gcttgcacca
     2761 agacatccag aaagatatga aaaagttgag caactcattg cccaaaccgg ctttgcttac
     2821 ggaaaaagaa gcaataatga tacttttgaa aataatgata taattatgct cgatacaatg
     2881 ggtgaattga tgaaaatgtt ttcagtgtgt cattttgcat atattggagg cagcttttcg
     2941 tctaccggag gtcacaatcc tcttgaggcc aatatatggg gtaaacctgt tgtttcaggt
     3001 gagtgtgtat tcaattttaa agatatttac gaatttctta cacgctctga tgcggcgaag
     3061 ttatctgcaa cgccagagga acttacaaat gacatgagaa ggcttcttac agataatgat
     3121 ttttataaca aagcatgtgc tgatacctct aagatatttg aggaaaactc cggtgctgtt
     3181 gactttgtta tcaatgtttt gaatgaagct taatatccaa aatatgataa tatatttata
     3241 tggaacaaag ctttttaaaa aacagtttgc tgctcaattc actaaagtct tctttgtctg
     3301 ctgcagtgca gccggaaaag cttgatgaga tgctggcttt ttacaataac aaagataagc
     3361 agatctgttt tgttgaaggc gatgccggct cttttaaaac tgaacttttt aaagaatcac
     3421 gccgattttt aacagacaat acgcttgttt ttggtttcag gtgttttgaa ggcacaactc
     3481 ttgatgatat ttttctttcg ttttttgaag atttgaaaag atatgctcaa gaaaaaaaag
     3541 tttcttttac taaaatagaa acaaactctc tttctcaaag gattattaaa tatctcagct
     3601 caataaattt gccgtgtgta attttgattg attcacttga agaagttttt aacaagcaaa
     3661 atcaatcaga aaaagatgag ataattaggt ttatcaaaca tttgcattca atgaataaat
     3721 ttaaaattgt tttgatatcc tcatatttta cagaggaatt tgatgattta tcagatgcaa
     3781 gcgtgtgtat caagacagaa ccatatacaa aagaacagat tttgagtgtt ataccggatt
     3841 tgtcacccga tgatttggac aaattatatg ctttgactgg cggaaacagg aactatgttt
     3901 acattacttc taatattgca gtgacgttga acacaagtgc aggtgctttg ctcgaggaat
     3961 ttgaaacaaa acgtgtttct tttgtggatt ttatcttgca aaaactcatc acttttgtta
     4021 ctgaaaaagt taaaaaatct ctgtattatc ttgcacttgt aaatgagcct attagcgggg
     4081 aataccttat aaaacagggc ttttttactc aagaacaatt aaattatgtt gtagaaaaag
     4141 gccttgtttc aaacgaatat aattctgtct atgtaaaaaa ctatttaaaa aaatatctta
     4201 taaggattat tgcgcatctt gataaaataa aaatacatac cttctggagg gatttttatt
     4261 cgtctcagct gcctttaaaa cccaaagaca gagttatttt aatttcaaga aatacaatgc
     4321 gttctcagat agaatatcat tcaggtttta ttattcaaca gcgtcaggag gccgacaata
     4381 cagatatgtc gttgatgagc tatcttaata gcaatcttac tgcgtggaac ataaaaaata
     4441 caaatataaa agatgatact gaagaaaaaa aagagcgccc tactcccccg aaaagtattt
     4501 cggataaaga aaaacgcttt gaaaaatatg aactgacaaa agatgaaatc tctttgttga
     4561 gtgtgcctgt tgatttaaga aaacaagaag aacacgcagc caaacagcag ctctaccgta
     4621 cttttgaaca aaaagaagac gctcttaaac aggaaaagaa acaaaaatct ttacctcaat
     4681 tgtacaattc tgctaaagag ctggaagatt ctcacgattt tgagacggca tttgttttgt
     4741 attatcaggc ttggcagctt gttgatgata cggattttaa agactatgaa ccgttgcttt
     4801 tggaacggct tgctgtgtgc gccaaaagaa tgaacaaaac aatggaggca atagactttt
     4861 ataacaggct gacagaattg tacgcatctt tagaacaaat tgataaaatg aatgaggtta
     4921 ggctcaatat tgcacaaatt tacaaagaaa cctttaagct aaaccatgca agagtcatat
     4981 atgaaaactt tataaacaaa aagtctactg catcaaattc tattctagcg cgttcatata
     5041 tcgaacttgc cggcatagag gaggattctg ccaatacaga aaaggctgtg gaatattaca
     5101 aaaaagcctt tgcaatagct gatgaaattt ctaatacaaa agaaaaactt gatgcaccta
     5161 ttcttgcaca ggcatatttt aaatatgcac tcattctgga tgatttcagc caaacccagg
     5221 ccgcattaga tttttaccaa agaagtatac ggactgcaaa agaaggcaat atctatcttt
     5281 ctgctgcgta tacaaatgtc ggacagatta taagagagca gggcaacccc aaaaaggctg
     5341 cagattatta taaaatggct ctaaaaactg atattgcaaa ctctaattat gaaggtgttt
     5401 attatatatg tttaaaactc gcaagattga gtgaggaaat tgcgctggaa tctgttgccg
     5461 attggctttt aaagtctttg agcgcagcca aacgcacaaa agaaaatatt tatataacaa
     5521 atgcttatct agaaacaggt gattactact ttgataaagg ggataatcaa aaggcgctga
     5581 aagctttcct gcttgctaaa aagagtcttg aaaaatacga acactcgcaa gaaagtgaac
     5641 aaagcataga acttcgtctc aatgatttga aaagcattct tcctcgaaat ataatagata
     5701 aagtaataca agacgtggaa aataatggaa gataaacact ttaccctgat agaacagctc
     5761 ataggcgaag aattgcccaa gctgacaaaa gagagattgc agaattttga acagttgttt
     5821 aaaatctata attctcacac taatctggtg agcaaaaatg acgaaaaagt gctgtttgaa
     5881 aaacatatct acgactcttt gtgtttggct ctgtttttta aaaaatttaa tattaacact
     5941 tctgcaaaaa ttctggatgt gggtacaggc ggtggtttcc cttcattgcc tcttgcaata
     6001 gtttttccac agctgcaaat ttatccgctc gattctattg caaaaaaaat cggatttata
     6061 gaatttgtac aaaaagagct cagactcgat aatctgcaca caatgtgcaa aagagctgag
     6121 gaattgccac aggagatgaa aggctatttt gatgttgtta catcacgtgc tgttgcctct
     6181 ttgaatacgc ttttggaata cacagtgcca tttgcttgtt caacgggttt tgttgttgca
     6241 tataaatcca aaaatgctga tgaggagctg caaaatgcca aaaatgcaat ttctgttcta
     6301 aaatgtgaag cagtacaacg cataaaatat gaactgccgc aaatacaaga acatgataga
     6361 gagttgataa tctttaaaaa aacaggcaaa acaccactct tatatcccag gaagtcagga
     6421 caggcaaaga aaacaccttt gtaaaattat gacaaaaaaa accgcttatc atttaagatt
     6481 agcggatgca atttttatag ataaagtgtg tttttaacaa ttaataattt aaaaatttat
     6541 tatat
//
LOCUS       DABS01000088            7175 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12627, whole genome shotgun sequence.
ACCESSION   DABS01000088 DABS01000000
VERSION     DABS01000088.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7175)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7175)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7175
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..993)
                     /locus_tag="CPT85_03440"
     CDS             complement(<1..993)
                     /locus_tag="CPT85_03440"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24519.1"
                     /translation="MTINKINLQSPVQNFAMQNTKTQQNPAFKGRTDIIQYALHMKNP
                     KISNHRFKNNVSYFLNVSKGLSKYTTAFKRYKMDFMFDLSEKYYYDIQKEGAEKLKLN
                     KNIVFRIYDKVKNPGDLHKNLINGQYNFKQMENIVDLTNDNPHNLKLAQKLLTEYPQL
                     SYEKLENFLKSPLSKQINKNYNDYKPYLKLHINQDDVVQGLEQKIEQGYDKKYFVAMN
                     KLFDLKERYHVIEQLDTDKLLKNYTEEKFEVLHKTARAYASISKNELAELGGDDKTIE
                     FIYNTTTRQNAPYRKKVLGFVERNINFENKPEAAPIKTLLEIFKEISLNPKARTY"
     gene            complement(1138..3579)
                     /gene="gyrB"
                     /locus_tag="CPT85_03445"
     CDS             complement(1138..3579)
                     /gene="gyrB"
                     /locus_tag="CPT85_03445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="DAB24520.1"
                     /translation="MATETNYGADNIRVLEGLEAVRMRPGMYIGSTSQRGLHHCIYEI
                     VDNSIDESLAGYCTQITVTINTDESVTVEDNGRGIPVDIKPDSGKSALEIVHTVLHAG
                     GKFGDGGYKVSGGLHGVGASVVNALSEKYVVEVSRQGYVWRQEYLRGEPTAPVEKIRE
                     TDKTGTKTTFWPDPEIFTETTHIDRDVIANRLREMAFLNKGLKIRYIDAETKTEHDFH
                     FEGGIGSYVEFLNKNKTVLFEQPIYIDKAVDNMQVEIAMQYTDAYNESVLSFANNINT
                     HGGGTHLTGFRNGITRVLNDYARKNKLLKESEANLSGDDVREGLTAIVSVKLPNPEFE
                     GQTKDKLGSSEATAAVQDAIRDKLQEWLEFNPKYGKIIIEKTLQAQRAREAARKAREL
                     TRRKSALETSTLPGKLADCSNREPEKCELYIVEGDSAGGSAKQGRNRMFQAILPLRGK
                     ILNVERARLDKMYANNEIKSMVQALGINISKNEDDVDIEKLRYHKIIIMTDADVDGAH
                     IRTLLLTFFFRYAKPLLDNGHVFIAQPPLYKITIGKQAEYLYDDRALDKMLRERGIKD
                     LTLYNKDKSKSATGAELVELLANMSTFYHSFNNPLINAIPSVVMRALIRSNIEPEDFD
                     NQETMQKHTAYINHYLVDHAENYGIEEAKNYRVELKFNTETQKYNLNLHLERETEQVL
                     LTSILIKSNEFQRVKNAYPAIRSYLIEEEKVLVLDTGSEELQITAFAELQRVVEERGK
                     KGLTLQRFKGLGEMMPQQLWETTMDPATRTLLKVNVEDAMLCDQLFDILMGDKVEPRR
                     DFIETNAVFAQNIDT"
     gene            complement(3756..7175)
                     /locus_tag="CPT85_03450"
                     /pseudo
     CDS             complement(3756..7175)
                     /locus_tag="CPT85_03450"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     start; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    3759..3760
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    5382..5397
                     /estimated_length=16
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    6942..6959
                     /estimated_length=18
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1860 a         1278 c         1291 g         2710 t
ORIGIN      
        1 gtatgttctt gctttagggt tcaatgatat ttctttgaaa atttccagca gagtttttat
       61 aggagctgct tcaggtttat tttcgaagtt gatattgcgt tctacaaagc ccaatacttt
      121 ttttctgtaa ggagcgtttt gacgggttgt ggtgttataa ataaattcta tagttttgtc
      181 atccccacca agttcggcaa gttcattttt gcttattgat gcataggctc ttgctgtttt
      241 gtgtaaaact tcaaattttt cttctgtata gttctttagc agcttatctg tatcaagctg
      301 ttctataaca tggtagcgtt cttttaagtc aaacagttta ttcattgcta caaaatattt
      361 tttatcatat ccctgctcta ttttttgttc cagaccctgt actacatcat cttgatttat
      421 atgaagttta aggtatggtt tgtagtcatt gtagtttttg tttatctgtt tggacaacgg
      481 actttttaaa aagttttcaa gtttttcata agaaagctgc gggtattctg tgaggagttt
      541 ttgtgcaagc ttaaggttgt gcgggttatc attagtcaaa tctacgatat tttccatttg
      601 tttgaaattg tactggccat ttatcaggtt tttatgtaaa tcacccgggt ttttcacttt
      661 gtcatatatt ctaaaaacaa tatttttgtt aagttttagc ttttctgcac cttctttttg
      721 tatatcgtaa taatattttt ctgataaatc gaacataaag tccattttgt agcgtttaaa
      781 tgcagtagtg tatttgctta atccctttga tacgttaaga aaataagaaa cgttgttttt
      841 aaacctgtga ttactgattt tagggttttt catatgcaat gcatattgta ttatgtcagt
      901 tctgcctttg aatgcaggat tttgctgtgt tttagtattt tgcatagcaa aattttgcac
      961 ggggctttgc aggttaattt tgttaattgt catgtaatgg cctctcttta ttaatgtttc
     1021 gtatgactaa tataaaacgc taaatattat tttttgatag ttatttaaac acttttaata
     1081 attcttagca aaaaaagaca gccctctaaa agggctgtct ttttatattt tttgagttta
     1141 ggtatcaatg ttttgtgcaa atacagcatt tgtttcaata aagtctcttc tgggctctac
     1201 cttgtcaccc ataagaatat caaataactg gtcgcaaagc attgcatctt ctacatttac
     1261 cttaagcagt gttcttgttg ccgggtccat tgttgtttcc cacagctgtt gcggcatcat
     1321 ttcaccaaga cctttgaatc gttgaagtgt aagacctttt ttacctcttt cttcaacaac
     1381 tctttgcagt tctgcaaaag ctgtgatttg aagctcttct gaccctgtat caagcacaag
     1441 cactttttct tcttctatca aatagcttct gattgcagga taagcatttt ttactctctg
     1501 gaattcgttt gatttgataa gaattgaagt aagcagtacc tgttctgtct ctctttcaag
     1561 gtggagattc agattatact tttgagtttc tgtattgaat ttgagctcaa ctctgtagtt
     1621 tttagcttct tcaatgccgt aattctctgc gtggtcaaca agatagtggt tgatgtatgc
     1681 agtgtgtttt tgcattgtct cttgattatc aaagtcttca ggttcgatat ttgaacgtat
     1741 caaagccctc ataacaacag acggaattgc attaatcaac gggttattga atgagtgata
     1801 gaatgttgac atattggcaa gcaattctac aagctctgct cctgttgcgc tttttgattt
     1861 gtctttgtta taaagagtta aatctttgat accgcgctct ctgagcattt tgtcaagcgc
     1921 tctgtcatcg tagaggtatt cagcctgttt gccgattgta attttgtaca aaggcggctg
     1981 tgcaatgaag acgtggccat tatccaaaag cggttttgca tatctaaaga agaatgtcaa
     2041 taatagtgtt ctgatgtgag caccgtcaac atcggcatcg gtcatgataa tgattttgtg
     2101 gtaacggagt ttttcaatat caacatcatc ttcgtttttg cttatgttaa taccaagcgc
     2161 ctgaaccatt gacttgattt cgttgtttgc atacatttta tcaaggcgtg cacgttctac
     2221 gttaagaatt ttacctctta atggcagaat tgcctgaaac attctgtttc ttccctgttt
     2281 agccgagccg cccgcagaat caccctctac tatgtagagt tcacattttt caggctctct
     2341 gttggaacaa tctgcaagtt tgccgggaag tgttgatgtt tcaagagcag atttgcgtct
     2401 ggtcagctct ctcgcttttc ttgcagcttc tcttgctctt tgtgcctgca atgttttttc
     2461 aatgatgatt ttaccgtatt tggggttaaa ctcaagccac tcttgcaatt tgtctctaat
     2521 agcatcttgc actgctgctg ttgcttcaga gctgccgagt ttgtcttttg tctgaccttc
     2581 aaactcgggg ttggggagtt taactgatac gattgctgtc aaaccttctc ttacatcatc
     2641 accggagagg tttgcttcag attcttttaa aagtttgttt tttcttgcgt aatcatttaa
     2701 tacacgtgtg ataccgtttc taaaacctgt aaggtgagta ccgccgccgt gagtattgat
     2761 attatttgca aagctcaata ctgattcatt gtaggcatct gtgtattgca tagcaatttc
     2821 aacctgcata ttgtcaacgg ctttgtctat gtaaataggc tgttcaaaca atactgtttt
     2881 atttttgttt aaaaactcaa cgtagcttcc gataccgcct tcaaagtgga aatcgtgttc
     2941 tgtttttgtt tcggcatcaa tatatctgat tttgaggcct ttgtttaaga atgccatttc
     3001 tcttaaacga ttggcaataa catctctgtc aatgtgagta gtttctgtaa aaatttcagg
     3061 atcaggccaa aaagttgttt ttgtaccggt tttgtctgtt tctctgattt tttcaacagg
     3121 agctgtcggt tcccctctaa ggtattcctg gcgccataca tagccctgtc ttgaaacttc
     3181 tacaacatat ttttcggata atgcgtttac aacagaagca ccaacgccgt gaagaccgcc
     3241 ggatactttg tagccgccat ctccaaattt acctccggca tgaagtactg tgtgtacaat
     3301 ttccaatgct gacttgccag aatcaggttt aatatcaaca ggaataccac gaccgttatc
     3361 ttcaacggta acactttcat cagtattgat tgtcacggta atctgtgtac aataacctgc
     3421 cagagattcg tcaatagagt tgtctacaat ttcataaata cagtggtgca aacctctttg
     3481 agaagttgaa ccgatataca taccgggtct cattctgacg gcttctaacc cttccaaaac
     3541 cctaatatta tcagcaccgt aatttgtttc tgttgccatg cttaattatt ccccaattag
     3601 tcttaaattc tatctttacc aatattttac aacaaacaaa gtcatttaac cagtttgtta
     3661 agttggtatg ataaaatgtg ttttatttca aaacaacaat cggaagattt tcttcgtgtg
     3721 ctttttttag atattcatcg ggaagatttg aaaggtcann tgtaaatagc tgtgatttca
     3781 ggattgctga caagaacctc attccaccat ttgtcgtttc tcaaaagagc ggaatttgtg
     3841 cctctttgtg cattttttct tgcaagcagt tctttataag cgtctgcaaa ctccggatcc
     3901 gtttggctta acagctccat tgtgaggggt tgccactgtg ttttggcttt tatattatca
     3961 agacgtttta tatattcttc atttgagagg ccgcttatag cttttatgtt atcagatacc
     4021 attgctctgt gttgtgcttt ttctcctttg cctctaagtg cattgtagcc tctgtctcta
     4081 tagtattcga caagcatatc cggaatattt ttggataaag aaaacatgtc atgtccgtat
     4141 gcagcgtatt gatgttccgg ggcaacattg aaaataaagc ctgtaccctt tgctgctgcg
     4201 tagctgtttt tgccgatgta gctggtgcaa atgactttgt catcttcaat tgttttaaag
     4261 gcatcaaaat ttgagaattt cattgctctt ggtgtatttg aagacgatgc aaaggagact
     4321 tctggtgtat gaataaaggc ataaaaatct tttatgtcag aggcattaac aacttttacg
     4381 ttataatctt taatagtctg aattttggct ttttggtaaa gctcggactg agatgtttga
     4441 gggagtataa aatcttctga tttgatttct ttgattctgt tttgtaacat tttgtcaaaa
     4501 tttcttgtca ggccgtcagc ctcttttgag ctgtagagca tttgcgcaag ctcaaatgta
     4561 ttgccttctt tcaatttgaa tgccatcagg tcaaatttgt tggctctgtc attacctttg
     4621 ataatctgcc cgcgtgtagg aataattgtt tctctttttt cagtgttcat aaatttttct
     4681 actatatctg agctttctat aactttatac aatttgacag cttcagcctc agacaagcct
     4741 aacttttgac cgataaagaa cccgtcaaat gcacaaccct gtatagagcc ggatgtattg
     4801 tccgtattgt gaagtaaaac tgccattgtc aggacttttt tgtctgaatc tgaaagtgca
     4861 tcaaagtttg gtttttgaac aactttttga agtgttttga ctgttgttac aggtaagttt
     4921 gagccatcta tttgtctgaa aatttcaggc ataagttttg atatatcttt caagtcattg
     4981 gtaagttgag gatagtcctt taccgttata aaattgttgt ttgtataatc attgacaaga
     5041 ggtttcatac gatttaaaac atctattgta tttgaatcgg taatatcagc aagcgagaga
     5101 tcttttgctc ttgtatcggg gtatcctaaa agctttccat cttttatatt aaacccatag
     5161 taatcgtata ttttcaattt ttcttcttta ttcaaagatg aacacatctt ttcaacttga
     5221 gatacaaaat tcttttgtga aagttggaga ttgatttgct caaggtctga caaatcagca
     5281 ttttttagag tatttgtcaa agaattcaaa tttttgtcaa agatattgat atcatttttt
     5341 gccagcggct caaaacggat gttcatgctt tgagagactt gnnnnnnnnn nnnnnnnatg
     5401 gggagtattt ttatcaaccc ggaaacattt tttgtatcca gtaaatcagt attgcatttc
     5461 aaaaggcagg ataaaaagtc tcttttttgc tctaaagaca tttctctgac agaatcaaaa
     5521 tctttgaagg gcaaagctgc atcaatgact tttatatccg cagtcgtgat atcttccggt
     5581 tttatatttt cgcgtataaa tttgtgtgca tcatcagaca ctccaaccat ttgtaccagt
     5641 tcatagcttc gatatccttc ggagtgaatc tgtttcagtc tatttaaatc aatatcaatg
     5701 tttccgtcaa tagccagaga cggtactgac agcttatgaa gctcaattgc cttgtcaata
     5761 acattattgt caatcgtgcc atcttcaagt gtgcacttgt taaataatct ttcatagttt
     5821 gaagagctgt caaaaaggta tttagcaggg cacacaccgt tttcggcaag ttttagcgct
     5881 gcatcaagtc tgtgaggatt tcgataaaaa tccgttgatg attcaagaat atctatagat
     5941 tggtttattg tttgcttatt tataaactca ggattattct ttgcaattct tttgaaacgt
     6001 tcagcggctt catcaaaaga aatctctttc gaatatgcat taatatttct catatttggt
     6061 attaatcgtt gtgttataaa caatggataa ccgctgtttg taagttcatc aactgtattt
     6121 aataattttt tatcaattgt tccgtcagct tttttgcagt tgtcgatatt tttattgata
     6181 tattcccaaa attcgccttg ttttctataa ctcagagctt tctcaaaagt ctgtttatca
     6241 aaattgccgt tgatatcggt acaatggctc ttgagcaaag taagatttgc agagtatctt
     6301 ccgttctttt ctattgcatc aagcaccata tcagtactgt tatcgtactg tgcataagat
     6361 tttagagttt ctatattggt tgttccatcg taattttttg ctgcatacag taaatcggat
     6421 ataataaatc cgttcactcc tttttgatgc aatgaagagg ctcctttcat cagatcagta
     6481 tcgttgccga ttgctctaat aatatctttt aaggtctcct tattcattgc gtttttggag
     6541 ttgtcaaaaa gggaatatat tgcgtcaact ccttcgtctg ttttagctat gcttgtcaaa
     6601 taccagtggt catcaagctc tgtaaatttg ttcacaaagt tcacatagtt ttcaatgtca
     6661 tcaggagttt ttacatattt ttccagagtg tttttaatca gacctctttt atatgcaaat
     6721 ctctgcccgg atgggtcagc ttcttcaaga agtttcaata cagcttgcag ttgttcttgt
     6781 gtttttactg atgaggagac atcaacaaga gcatagcttt catttccaac ccacgattta
     6841 tctttgttgt ttacatgggg cagacctttt ttataaagct catacaaaag cggatttttc
     6901 tttatctcac ttataatgtt tttatactga taatctgctc gnnnnnnnnn nnnnnnnnna
     6961 ataagcattg ccataatttc cgcatctttt atgtctgtaa gatattggaa attttctctg
     7021 atatcataat ttaattctga atttttgaag agtatcgagg ctttttgata gtcctctttt
     7081 gtttttaggc tatcaataaa acgtcgaatt tcaagatcca gtcctgaatt tgcttttgga
     7141 ttatgtccct gtgatgcaat ttgttttaga agttc
//
LOCUS       DABS01000089           11617 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9951, whole genome shotgun sequence.
ACCESSION   DABS01000089 DABS01000000
VERSION     DABS01000089.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 11617)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 11617)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11617
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..233)
                     /locus_tag="CPT85_03455"
     CDS             complement(<1..233)
                     /locus_tag="CPT85_03455"
                     /inference="COORDINATES: protein motif:HMM:PF01168.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="DAB24476.1"
                     /translation="MKFNRASFLNTHRDAWVEVNLDCIEHNILEFKKYLKKDAKLFAV
                     VKADAYGHGAVMIAPVLLASGVDFLGVSSVDEGL"
     gene            332..1078
                     /locus_tag="CPT85_03460"
     CDS             332..1078
                     /locus_tag="CPT85_03460"
                     /inference="COORDINATES: protein motif:HMM:TIGR00040"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcE family phosphodiesterase"
                     /protein_id="DAB24477.1"
                     /translation="MKIAVISDIHGNMQALSAVLKNIQEENCDKIFCLGDLAMAGPEP
                     ARTIDKIQELIKTTDFTCIQGNTDEMIVNCDNQMIHMLEENNPVMAHALECDATVVSE
                     EQKQFLKNLPPQKELEIEGVKILLVHGSPRKNNENIYCDLKIEEVEEMIKGTDANIIF
                     CGHTHVPCGYQTNTRQTVVNVGSVGRPFAQKPKSCYAILEINNGEFSIKHNLVDYDVK
                     TASEILKGRGFEGADKLAAMLISATSRYPQ"
     gene            1106..2401
                     /locus_tag="CPT85_03465"
     CDS             1106..2401
                     /locus_tag="CPT85_03465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015143623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="DAB24478.1"
                     /translation="MIERYSLKEMKQLWELESKFGFYLEVELAVCEAYNTLGQISNED
                     LKTIKERANFSVERIDEIEKEVGHDVIAFLTNVNENVGEASRFIHMGMTSSDVIDTAF
                     ALQIKKASEIIEKDLDKVIETIKNKAKEHKNTICIGRSHGIHAEPMTFGVKLLSWLDH
                     FERAKRRFIAAKEEIAQGQISGPVGTYSNISPEIEKLVCKKLGLTPAKISTQVIARDN
                     HAYYMQSLALIASAIEQCSIEIRHLQRTEVLEAEEAFKKGQKGSSAMPHKKNPISSEN
                     LSGLARVVKSNAAASLENIALWHERDISHSSVERIIFPDSTILIDYMLNRFANVVEGL
                     VINKENMLKNTSLFGGIVFSQRVLLELTNKGLSREKAYTLVQKNALEAFNKPDGNFKQ
                     NLLSDPMMCEHLNADEIENCFDSSYYLRNIDEIYSRFGI"
     gene            2414..3031
                     /locus_tag="CPT85_03470"
     CDS             2414..3031
                     /locus_tag="CPT85_03470"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24479.1"
                     /translation="MGCLKFIIKVAIVVLAIVGFKSLGGWDWCVKTFHIGQKPTQQSM
                     LEKTKDVADFSKIRDEYELSKSANILGFRAVVAEHGATGQKLAVVNENKNIKITQEDF
                     KNGQLKKKIDDVNKKLEYQYIHVENFKILKQGTMKTMGQNAPYALFEAEVTNLPVKKL
                     KGMICVAKDKEGKNKIIVSANDGGKYSQIISEQFFKNVKLNDAKK"
     gene            3015..4130
                     /gene="ribD"
                     /locus_tag="CPT85_03475"
     CDS             3015..4130
                     /gene="ribD"
                     /locus_tag="CPT85_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011098942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin biosynthesis protein RibD"
                     /protein_id="DAB24480.1"
                     /translation="MTQKNNEKYIKKCIKLARKGEGKVSPNPLVGAVILDKIGKIAGY
                     GWHQKYGEAHAEVNAVKMAKEKGIDIKGGTIFVSLEPCSHFGKTPPCCDLIIKEGLKK
                     AVIGCVDPNPIVSGRGIQKLKDAGIEVVTGILENECKKLNEIFIKNQLDNKPFIAIKT
                     ASTLDGKIATKNGSSKWITTEKARKHVQKLRNKYDAILTGSGTVIADNPSLTARIKNG
                     TNPIRVIIDSNGRTSAESKVFNNDGTKVFLAVFAQTDTSKYPENVEIIKCPKLESTGK
                     IDLQFLTRKLYEKGVRSILVEAGGTLNGAFIKEKLADKLYQFIAAKILGDKDGKNFAE
                     GFDISDINNCVKLNITNVKMFNQDILIEADFLVEQPS"
     gene            complement(4093..4905)
                     /locus_tag="CPT85_03480"
     CDS             complement(4093..4905)
                     /locus_tag="CPT85_03480"
                     /inference="COORDINATES: protein motif:HMM:PRK09562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="DAB24481.1"
                     /translation="MVKTCNYPNLERLIEILEILRSENGCAWDREQTHYSLKKNMIEE
                     AYEAVDAIEDGDCKHLQEELGDVLLQVVLHSQIAKEENEFTIEDVAKGISDKLVHRHP
                     HVFGDLKVSNTKDILDNWDKLKAEEKKHRKSAMDGISKAQSALMSAQKISKNAVKKGF
                     EWPDEKTLWECFYSEIDEFKEAVQEGDTQHAEEEFGDILFAAVNVARWNKIDAEQALL
                     KANRKFMARFRKMEELAQKENPQKPLEEYSFEEYDNLWKRAKKVVQQENLPQ"
     gene            complement(4907..6205)
                     /locus_tag="CPT85_03485"
     CDS             complement(4907..6205)
                     /locus_tag="CPT85_03485"
                     /inference="COORDINATES: protein motif:HMM:PF03816.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24482.1"
                     /translation="MNELKDKNEQYNQYLYKHKPNQSKGGFGRIITGLLLTVIVIIAA
                     AFAFIGYAGTDNKYSKMLMSFVKDLSPKQQKGFNLPILQQKQNILIVGVDSNGKNADP
                     FKGTRSDTMILVNLDPAGHSINAISIPRDSKVYLANDFGVQKINAAHALGGIDLTIKT
                     VEDTLGIKVNKYVVVNNDGVKKLVDALGGVPVYIEKDMYYNDYSGGLHINLSKGLHVL
                     NGEQVEGYLRFRKDGLGDIGRTSRQQWFVKAVLEKLQSPSVIPKIPEVLNIASTYVKT
                     NLSLYEMSHIAAALRNINMSDVEFATLPGAPSKKGYISYWILDPEKTQEVIDRMVYRD
                     KPSPSDKKLVAGIMYSFDKEEEAMKIKDELTASGYEVNCIGRAHLPHSQIIGHNAAVT
                     SDFVGWLKKQVPEVKSSQFVYDPIRMYCVHSDFTIIVSGS"
     gene            6333..7493
                     /gene="proB"
                     /locus_tag="CPT85_03490"
     CDS             6333..7493
                     /gene="proB"
                     /locus_tag="CPT85_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014932672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="DAB24487.1"
                     /translation="MDNNNFREKIKNAQRIVFKFGTNVLRNDYKEISLSRIYTFIEDI
                     AQLKKLGKEPIIVTSGAVGLGAKRLSVDSSESMSVKQACAAVGQSRLMSIYEDGFDKY
                     GIITAQILLTEEDFTHRRKYLSLHDTLNTLISLGTIPVINQNDTVSTQELDFYQDTFQ
                     VSFSDNDKLSALVASELDADLLVVLSDIDGLFDDNPKENPDAKKISVVEELTEEIEKY
                     AREASQGGRGGMKTKLEAMNVVTRSGGTGIIANGKEPHIIKRLFDIDNNEELGTVFLP
                     TENLTNKKRWIAYATNIQARMTVNDGAKKALTQKYTSLLPIGVLNIEGDCQKGDIVSI
                     LDTDGNEFARGMVNYNCSDCKRIIGHHSDDILTILGYKNYDAIITRDNIALL"
     gene            7511..8815
                     /locus_tag="CPT85_03495"
     CDS             7511..8815
                     /locus_tag="CPT85_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="DAB24483.1"
                     /translation="MVTNLETMAQNAKLASYTLASLDTLTKNKALDAVANKIEENKLA
                     ILQENAKDLEEAKKLLESGEINNSTYNRLKLDHNKMRDMVQGIRDVKRLEDPVNKKLW
                     AMGLDTGLDLYRVSCPIGVIGVIFEARPDVIPQICALAIKSANAVLLKGGKEAYNTNV
                     ILTRLIKEALDELGAFPQDTINILFSRDEVAQMLTMDKYIDLIIPRGGNALVQYVKDN
                     TKIPVMGHADGICHIYIDEAADVKKATDICIDAKTQYPSACNAVETILIHESLLENYL
                     PQLVIEFEKAGVTVKGCEKCKEFVPHLELATKEDWAMEYGDKIISIKAVKDLFDAIAH
                     INVYGSGHTDCIITEDKQAIDVFMNLVDSAGVFANVSTRFADGFRYGLGAEVGISTSK
                     THARGPVGLEGLVIYKYKMYGSGQTVAPYADGKKTFIHQRII"
     gene            8815..9912
                     /locus_tag="CPT85_03500"
     CDS             8815..9912
                     /locus_tag="CPT85_03500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00539"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase"
                     /protein_id="DAB24484.1"
                     /translation="MTQSAYIHIPFCKNKCNYCSFTSFSAHSDAQRKKYVDTLLLEID
                     NFYKGEPLKTLYIGGGTPSLLEIKDLQRILYCFNYDPSCEITIEINPETVDFEYLKKL
                     KDAGFNRISIGIQSFNDEILKAIGRIHNASRALQTVIAAKKAGFDNINADFIYGLPNQ
                     TIDDFVNDLRTIEQTGVTHISLYGLKIEEGCKFFENMPENLADDDLQADMYLAAIDTL
                     ENAGYEHYEISNFAKKGFESRHNLNYWNDGEYYGFGAAAHGYIGGVRYSNFCDLKDYE
                     KKYDSKEFLEALNKQERLEETIFLGLRKAEGININEINQKFSIDFETFYKGILDKYTQ
                     SNHLVKTQNGYRLSNEGFLISNVIMAEFIDC"
     assembly_gap    10009..10025
                     /estimated_length=17
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(10229..10933)
                     /locus_tag="CPT85_03505"
     CDS             complement(10229..10933)
                     /locus_tag="CPT85_03505"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24485.1"
                     /translation="MYDVFLKSAIFGVRNADKVATTNDKGRVFADVGQFTNAAKAAAQ
                     LDNALGKGAQAAINAMGSVAQNNKALETFAKGANWAANHVNPLLIGAAGYRVVVADDK
                     EHALKREVLGMSSMFAGEAAMKEFFKSNTMNNFKAGIKNPKLRTCVTALEGVLFVLGS
                     IASSNVGYKIGDKMFANKTKRTPQKNKIEVKDNKVLKTTMPQKEPVETKADKKTELDD
                     YEKDFFNARKENGMIA"
     assembly_gap    11045..11046
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            11064..11273
                     /locus_tag="CPT85_03510"
     CDS             11064..11273
                     /locus_tag="CPT85_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="DAB24488.1"
                     /translation="MLKNFLIKLISIYQKISSLKPPVCRFYPTCLEYTKQAISKYGII
                     KGGWLGIKRICRCHPLNPGGYDPVP"
     gene            11435..>11617
                     /locus_tag="CPT85_03515"
     CDS             11435..>11617
                     /locus_tag="CPT85_03515"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24486.1"
                     /translation="MVDFLIFILVLVLASLLVYVMAYTVYFTACVFNSTKAKRFLLKQ
                     KYNAAAQPNNMIIIIYA"
BASE COUNT         3942 a         2195 c         2150 g         3311 t
ORIGIN      
        1 agcccttcat caacagacga cacccccaga aaatccacac ccgaagcgag caatacagga
       61 gctatcataa cagcgccgtg tccgtatgcg tcagccttta ccactgcaaa aagttttgca
      121 tcttttttca ggtacttttt aaactctaat atattatgct ctatgcaatc cagatttact
      181 tctacccagg catctcggtg ggtatttaaa aaagaggctc tgttaaattt cactttacca
      241 cccgctatcg ttttttacac aataattcta tctcaaaaaa tatattacat gttaaaattt
      301 ttatatacaa aaacaataaa aaggaaaaac tatgaaaata gcggtaatat cagatataca
      361 cggaaatatg caggctcttt cggccgtatt aaaaaatatt caagaagaaa actgcgataa
      421 aattttctgt ctcggcgacc ttgctatggc aggccctgag ccggcaagaa caatagataa
      481 aatacaagag cttattaaaa caactgattt tacctgcata cagggaaata ctgacgaaat
      541 gattgttaat tgcgataatc agatgattca tatgcttgaa gaaaacaatc ctgttatggc
      601 acacgcgctg gagtgcgatg caacagtcgt ttcagaagag caaaaacaat tcttaaaaaa
      661 tctgcccccg caaaaagagt tggaaattga aggcgtaaaa atacttttgg tacacggcag
      721 tccgagaaaa aacaacgaaa atatttactg cgatttaaaa atcgaagaag ttgaagaaat
      781 gataaaaggc acagatgcaa acattatttt ttgcggtcac acacacgtac cttgcggata
      841 ccagacaaac accagacaaa cagttgtcaa tgtcggcagt gtaggccgtc cgtttgcgca
      901 aaagccaaaa tcctgttatg caattcttga aatcaacaac ggagaatttt ctatcaagca
      961 caaccttgtt gattacgatg tgaaaacagc atcagagata ttaaaaggca gaggttttga
     1021 aggagcagat aagctggctg ctatgctaat aagcgccaca agcagatacc cgcagtaaca
     1081 gattgtcata aaagaggcaa aacttatgat tgaaagatac agtttaaaag aaatgaaaca
     1141 gttgtgggag ctcgaatcaa aattcggatt ttatctggaa gttgagcttg cagtttgcga
     1201 agcatacaac acactcggcc aaatcagcaa cgaagactta aaaaccataa aagaacgcgc
     1261 caatttcagc gttgaaagaa ttgacgaaat tgaaaaagaa gtcggacacg acgtgatagc
     1321 atttttaaca aacgttaatg aaaacgtagg cgaggcatcc agattcatcc acatgggtat
     1381 gacaagttcc gatgttatag acacagcttt tgcgcttcaa atcaaaaagg catctgaaat
     1441 tattgaaaaa gaccttgata aagttattga aaccatcaaa aacaaagcaa aagagcataa
     1501 aaacacaatc tgtatcggcc gttctcacgg tatacacgca gagcctatga ccttcggggt
     1561 aaagctttta agctggcttg accattttga aagagcgaaa agaagattta ttgctgcaaa
     1621 agaagagatt gcccagggtc aaatttccgg ccctgtcggg acttacagca atatctcgcc
     1681 ggagatagaa aaacttgtat gtaaaaaact gggtctaaca cccgcaaaaa tctccacaca
     1741 ggtgatagcc agagacaacc acgcatacta catgcaatct cttgcattga ttgcatctgc
     1801 catagaacag tgctctattg aaatacgcca tctgcaaaga acagaagtgc ttgaagcaga
     1861 ggaagcattc aaaaaaggtc aaaaaggcag ctccgcaatg ccgcacaaaa agaacccgat
     1921 ttcttcggag aatctttcag gccttgcccg tgtagtcaaa agcaatgcag cagcatcctt
     1981 ggaaaatatt gcactctggc acgaaagaga catttctcac agctctgtag agcgtattat
     2041 tttcccggat tcaacaattc ttattgacta tatgctcaac cgctttgcta acgttgttga
     2101 ggggcttgtg attaacaaag aaaatatgct caaaaacaca tcattgtttg gcggaatagt
     2161 tttctcccaa agagtattgc ttgagcttac caacaaaggg ctttcaagag aaaaagccta
     2221 cacgcttgtt caaaaaaatg cacttgaagc ttttaacaaa cctgacggaa attttaaaca
     2281 aaaccttttg tctgacccga tgatgtgtga gcatctaaat gctgacgaaa ttgaaaactg
     2341 ttttgattca agttactatt taagaaatat agacgaaatt tattcaaggt ttggaattta
     2401 gtttggagag cgtatgggct gtttaaaatt tataatcaaa gttgcaatcg ttgtactcgc
     2461 tatagtggga tttaaatcac tgggcggctg ggactggtgt gtaaaaacat ttcatatagg
     2521 tcaaaagccc acgcagcagt caatgcttga aaagactaaa gatgtggcag atttttcaaa
     2581 aatccgtgac gagtatgagc tatcaaaatc tgcaaacatt ctggggttta gagctgttgt
     2641 tgccgaacat ggagcaacag ggcaaaagct ggctgtagtc aacgaaaata agaatataaa
     2701 aatcacacag gaagatttta aaaacggaca gctaaaaaaa aagatagacg atgttaacaa
     2761 aaagctggaa tatcaataca ttcacgttga aaactttaaa atcttaaaac agggcacaat
     2821 gaaaacaatg ggccaaaatg ctccttatgc actttttgaa gcagaagtta caaacctgcc
     2881 tgtaaaaaaa ctcaaaggta tgatttgcgt tgccaaagac aaagaaggca agaacaaaat
     2941 cattgtttct gctaatgacg gcggaaaata ttcacaaata atatcagaac agttttttaa
     3001 gaatgtaaaa ttaaatgacg caaaaaaata atgaaaaata tataaaaaaa tgtataaaac
     3061 ttgccagaaa aggggagggg aaagtttcgc ctaacccgct tgttggagcg gttattctgg
     3121 ataaaatcgg aaaaattgca gggtacggct ggcatcaaaa gtacggcgaa gcacacgcag
     3181 aagtaaatgc agtaaaaatg gcaaaagaaa aagggataga cataaaaggc ggcactatct
     3241 ttgtaagcct tgagccgtgc tcgcattttg ggaaaacccc tccgtgctgt gatttaataa
     3301 taaaagaagg cctaaaaaaa gctgtaattg gctgtgttga cccaaatcca attgtatcgg
     3361 gacgcggtat acaaaagcta aaagatgccg gcattgaagt tgttacaggt atactggaaa
     3421 acgaatgcaa aaagcttaat gaaattttta taaaaaatca gctcgacaac aaacctttta
     3481 ttgctataaa aaccgcatcc acactggatg gcaaaatcgc aactaaaaac ggatcttcaa
     3541 aatggattac aactgaaaaa gcacgtaaac atgtacaaaa attgagaaat aaatacgacg
     3601 caatcctcac aggctcaggc actgttattg cagacaaccc gtctttgaca gccagaataa
     3661 aaaacggaac aaatccaatc cgcgtaataa tagattcaaa cgggcgcacc agcgcagagt
     3721 ccaaggtttt taacaatgac ggaacaaaag tttttcttgc tgtttttgct caaaccgaca
     3781 cctcaaagta tcctgaaaat gttgaaataa taaaatgtcc caaactcgaa agcaccggta
     3841 aaattgacct tcaattttta acccgaaagc tttatgaaaa gggagtaaga agcatactcg
     3901 tagaagccgg aggcacatta aacggagctt ttatcaaaga gaaactagca gacaagcttt
     3961 atcaattcat tgcagctaaa attctaggcg acaaagacgg gaaaaatttt gcagaaggtt
     4021 ttgatataag tgacataaat aactgtgtaa agctaaacat aacaaacgta aaaatgttta
     4081 accaagatat tcttattgag gcagattttc ttgttgaaca accttcttag ctcttttcca
     4141 caggttgtcg tactcttcaa aagaatattc ttcaagcggt ttttgcgggt tttctttttg
     4201 cgcaagctct tccatttttc taaaacgtgc cataaacttt ctatttgctt ttaaaagagc
     4261 ctgttccgca tcgattttat tccatcttgc gacattaaca gccgcaaata atatatcgcc
     4321 gaattcttct tctgcatgct gtgtatcgcc ttcttggaca gcttctttga attcatctat
     4381 ctccgaataa aaacactccc acaatgtttt ttcatcaggc cattcaaaac cttttttaac
     4441 agcatttttg ctgatttttt gcgcactcat tagtgcagac tgggcttttg aaattccatc
     4501 cattgcagat tttctatgtt ttttttcttc tgctttcagc ttatcccagt tatcgagaat
     4561 atcttttgtg ttgctgactt tcaaatcgcc aaacacatgc ggatgacggt gtacaagttt
     4621 atcagatatt ccttttgcaa catcttctat agtgaattcg ttttcttctt ttgcaatttg
     4681 agaatgcaaa acaacctgta aaagaacatc tccaagctct tcttgcaaat gtttgcagtc
     4741 gccgtcttcg atagcatcaa cagcctcgta ggcttcttct atcatatttt tttttaaaga
     4801 ataatgagtc tgttctctat cccatgcaca gccgttttca ctcctcagaa tttcaagaat
     4861 ttctattagc cgttctaaat taggataatt acacgttttt accatattaa gaacccgata
     4921 ctataattgt aaaatcactg tgcacgcaat acattctgat tgggtcataa acaaactggg
     4981 atgattttac ttctggaact tgctttttta accaacctac aaagtcgctt gtaacagctg
     5041 cattgtggcc gatgatttga gaatgcggaa ggtgtgctct tccgatacag tttacttcat
     5101 aaccggaagc cgttaattca tctttaattt tcattgcttc ttcttctttg tcaaaggaat
     5161 acatgattcc ggccacaagt tttttgtctg acggagaagg tttgtctctg taaaccattc
     5221 tgtcaattac ttcctgtgtt ttttcagggt caagtatcca gtagcttata tagccttttt
     5281 tggaaggagc gccgggcaaa gttgcaaatt caacatcact catatttata tttctcaaag
     5341 ctgcagctat gtgagacatt tcatacaaag aaaggtttgt tttaacgtat gtggaagcaa
     5401 tattcaaaac ttccggaatt ttggggataa cagaaggtga ttgaagtttt tcaagcacag
     5461 cttttacaaa ccactgctgt cttgatgttc tgccgatatc gccaagaccg tcttttctga
     5521 atcttaagta gccttccacc tgttcaccgt tgagtacatg caaacctttt gaaagattga
     5581 tgtgaagacc gcctgagtag tcgttgtagt acatatcctt ttcaatgtaa acaggaacac
     5641 cgccaagggc atccaccagt ttttttacac cgtcattgtt tacaactacg tatttattaa
     5701 cttttattcc aagagtgtct tcaacggttt ttattgtcaa atcaataccg cctaaagcgt
     5761 gtgctgcgtt gattttttga accccgaaat cattagcaag ataaacctta ctgtcacgag
     5821 ggatagaaat agcattgata gaatgtcctg cagggtcaag gtttacaaga atcatcgtat
     5881 ccgaacgtgt acctttaaat gggtcggcat tttttccgtt agagtcaaca cctacaatca
     5941 gaatattttg tttttgttgc aagataggaa gattaaaccc tttttgttgt tttggactaa
     6001 ggtcttttac aaaactcatc aacatttttg agtatttatt gtctgtaccg gcatagccga
     6061 taaaagcaaa agctgctgct attatgacta tcacggtaag caaaagccct gttattattc
     6121 tgccaaaacc gccttttgat tgattaggct tgtgtttata caaatattga ttatactgct
     6181 cgtttttatc cttgagttcg ttcatttcta gtctatcctt gtaaaaaaaa ttattaaaat
     6241 tactagccaa ttaataaata tattacttca aaaaaatttt ttttaataca cggtttattt
     6301 taatttaatc attttttacg tataatttgc gtatggataa taacaacttt agagaaaaaa
     6361 taaaaaacgc tcaaagaatc gtctttaaat tcggcacaaa tgttttgaga aacgattaca
     6421 aagaaatttc tctttcccgt atttacacat ttattgaaga cattgcacag ctcaaaaaac
     6481 tgggtaaaga gcctattatt gttacatcag gagctgtagg ccttggtgca aaaagactca
     6541 gcgtagattc ctcagagagt atgtctgtaa aacaggcctg tgctgctgta ggacaatcac
     6601 gtcttatgtc tatttatgaa gacggatttg acaaatacgg cattattact gcacaaattc
     6661 ttttaacaga agaagatttt actcacagaa gaaaatatct tagcctgcat gatacattga
     6721 acacgctcat atcccttggc acaattccgg taatcaatca gaatgacacc gtgtctacgc
     6781 aagagctcga tttttatcag gatacttttc aggtaagttt ttcagacaac gacaaattgt
     6841 ctgcccttgt tgccagcgag ctggatgcgg atttgctggt tgtattgtct gatattgacg
     6901 gactttttga tgacaaccct aaagaaaacc ctgatgcaaa aaagatttca gtagtcgaag
     6961 agcttacgga agaaatagaa aaatatgcac gtgaggcctc tcaaggggga cgcggaggta
     7021 tgaaaacaaa actcgaggca atgaatgttg taacacgctc gggcggaaca ggtattattg
     7081 ccaacggcaa ggaacctcat ataataaaaa gactttttga tatagataac aatgaagaat
     7141 tgggtacggt atttttacct acagaaaatc ttacaaacaa aaaacgctgg atagcatatg
     7201 ccacaaatat tcaggcaaga atgactgtca acgacggagc aaaaaaagca cttacgcaaa
     7261 aatacacaag ccttttgcct ataggagtgc tcaatattga aggcgactgt caaaaaggcg
     7321 atatagtaag tattttggat acagacggaa acgaatttgc cagaggtatg gtaaactaca
     7381 actgctctga ctgcaaaaga ataataggcc accattccga tgacatttta acaattttgg
     7441 gatacaaaaa ctacgatgca ataattacac gcgacaacat tgcattgcta taacataagg
     7501 acaattaaat atggtcacaa atttagaaac aatggcacaa aatgccaaac ttgcatctta
     7561 cactttagct tcacttgata cccttacaaa aaacaaagcg cttgacgctg ttgcaaataa
     7621 gattgaagaa aataaacttg caattctaca agaaaatgca aaagaccttg aagaagcaaa
     7681 aaaactttta gaatcaggag aaataaacaa cagcacatac aatcgtctaa aacttgacca
     7741 taacaaaatg cgagatatgg tgcagggaat tagagacgta aaaaggctgg aagaccctgt
     7801 aaacaaaaaa ctctgggcaa tggggcttga tacgggactg gacttgtatc gtgtgagctg
     7861 tccgataggg gttatcgggg tgatttttga agcccgtccc gatgtaatcc cgcaaatttg
     7921 cgcgttagca ataaaaagtg ctaatgctgt tcttttaaaa ggcggaaaag aagcttataa
     7981 cacaaatgta atcttaacaa ggctgataaa agaagcgctt gatgagcttg gagctttccc
     8041 gcaagataca ataaatattc ttttcagccg cgacgaagtg gctcaaatgc ttacaatgga
     8101 caaatatatt gaccttatta tcccgcgcgg aggcaatgct cttgtccagt acgtaaaaga
     8161 taataccaaa atccccgtga tgggtcatgc tgacggaatc tgccatattt atatagacga
     8221 agcagccgat gtaaaaaaag ccactgatat ttgtattgac gcaaaaacac agtacccgag
     8281 cgcgtgcaat gctgttgaaa caatacttat acacgaaagt cttctcgaaa attaccttcc
     8341 gcagcttgtc atagagtttg aaaaagcagg tgtaacagta aaaggctgtg aaaaatgcaa
     8401 agaatttgtc cctcatctgg aacttgctac aaaagaagac tgggcaatgg aatacggtga
     8461 caaaataatt tcaataaaag cagtaaaaga cctgtttgac gcaattgcgc acataaatgt
     8521 ttacggctct ggccacacgg actgtataat aacagaggac aaacaggcaa tagatgtatt
     8581 tatgaatctt gtggattctg ccggtgtatt tgcaaacgtt tccacacgtt ttgctgacgg
     8641 attccgctac gggctcggcg cagaggtagg tatttctaca tcaaaaaccc acgcgagagg
     8701 accggtcgga cttgaaggtc ttgttattta caaatacaaa atgtacggtt caggccaaac
     8761 cgtagcgcct tacgctgacg gcaaaaagac ctttattcac cagagaataa tttaatgact
     8821 caaagcgcat acatacatat tcccttttgc aaaaacaaat gcaactactg ttcgttcaca
     8881 tcttttagcg cgcacagtga tgcacaacgc aaaaaatatg ttgatacgct gcttttagaa
     8941 attgacaatt tttacaaagg agaaccttta aaaactcttt acatcggggg aggcactccg
     9001 tctttgctcg aaattaaaga tttgcagagg attttatact gttttaatta cgacccatct
     9061 tgtgaaataa caatagaaat aaaccccgag acagtagatt ttgaatattt aaaaaagcta
     9121 aaagacgcag gatttaacag aatatccata ggcatacaga gttttaacga tgaaatttta
     9181 aaagcaatag gccgtataca caacgcgtcc agagcattac aaaccgttat tgctgcaaaa
     9241 aaagcaggct ttgacaacat aaacgcagac tttatctatg gactgccaaa ccaaacaata
     9301 gacgattttg taaacgacct caggacaatc gaacaaactg gcgttacgca tatatcgctt
     9361 tacggactaa aaatcgaaga aggatgtaag ttttttgaaa acatgcctga aaacctggct
     9421 gatgatgacc tacaggcaga catgtacctt gctgcgattg atacactaga aaacgcagga
     9481 tacgaacact atgaaataag caattttgca aaaaaagggt ttgagtcccg ccataattta
     9541 aactactgga atgatggaga atattacgga ttcggcgctg ctgcacacgg atatataggg
     9601 ggagtaagat actcaaactt ttgtgattta aaagattatg aaaaaaaata cgactcaaaa
     9661 gagtttcttg aagcactcaa caaacaggaa aggcttgaag aaaccatatt cctcggttta
     9721 agaaaagcag aaggcataaa cataaacgaa ataaatcaaa agttttcaat agattttgaa
     9781 acattttata aaggtattct tgacaaatac acacaaagca atcaccttgt aaaaacccaa
     9841 aacggataca gattgagcaa tgaaggattt ttgatttcta acgtcattat ggctgagttt
     9901 attgattgtt aaatattgtt tacaattgtt gaaaaaatag ccaaaatcat taaagttatg
     9961 gcaggactaa tccgataata aatatgtgaa gtgtattagt gtatcagtnn nnnnnnnnnn
    10021 nnnnnagcca attttttctc aaacaaagat cccgaactgc ctaatttgaa tctcaaaaaa
    10081 cttccaaaaa ttaacaaagg gctgcccaaa attcaaatgc agggtgattc tgactttttg
    10141 ttcgaaatag acggaaaaaa cattaatatg gacgaagttg ctcaaaagtt cagcacaatt
    10201 tattttaatt cataaaattt gtgcaaagct atgcaatcat tccgttttct tttcttgcgt
    10261 taaagaaatc tttttcgtaa tcgtctaatt ctgttttttt atctgctttt gtttcgacag
    10321 gttctttttg cggcattgtt gtttttaaaa ctttattatc ttttacttca attttgtttt
    10381 tttgaggtgt tctttttgtc ttatttgcaa acatcttgtc cccgattttg tagcccacat
    10441 tgcttgaagc aatagaaccg agaacaaaca agacgccctc aagagctgtt acacaggttc
    10501 ttaactttgg attttttata cctgctttaa agttgttcat tgtatttgat ttaaaaaatt
    10561 ctttcattgc agcttcgcca gcaaacatag acgacatgcc aagaacctct ctttttagag
    10621 catgttcttt gtcatctgca acaacaactc tgtaaccggc tgcaccaatc aaaagagggt
    10681 taacgtggtt tgcagcccag tttgcgcctt ttgcaaaagt ttcaagtgct ttgttgtttt
    10741 gtgcaacgct gcccattgca ttaattgcag cctgagcacc ttttccaaga gcattatcca
    10801 gttgtgctgc ggcttttgcc gcatttgtaa attggccgac atccgcaaaa actctgcctt
    10861 tgtcattcgt tgttgcgact ttatcggcat ttcttacacc aaatattgct gattttaaaa
    10921 atacgtcgta caaagtatca ccttacacta tacacttcca tttatataaa caatttctga
    10981 ttttaaaaat tgctattaat ttaaattttt ttacaattgt aatataatat tgtttacagt
    11041 gatanncggt gtttacaatc aaaatgttaa aaaatttttt aataaaatta ataagtattt
    11101 atcaaaaaat atcatcacta aaacctcctg tttgcaggtt ttatccgaca tgcttggaat
    11161 acactaaaca ggcaatatca aaatacggaa taataaaagg aggctggctt ggcataaaac
    11221 gtatctgccg ctgccacccg ttaaaccccg gcggatatga ccctgtacct taagtatatt
    11281 tacatatttt catctttatg taggatttta ggcttcaggc tggatttttg agtatttttt
    11341 ttataaaatt taacacataa ttaagagccc cacttcgtat ttaaatcacc ccatattata
    11401 acagctgtaa aaagggctcg tgacgaggaa taaaatggtt gactttttaa ttttcatact
    11461 ggttttagta ctggcatcac ttttagttta tgtaatggct tacacggttt actttacggc
    11521 ctgtgtcttc aacagtacaa aggcaaaaag atttttgctc aaacaaaaat acaatgccgc
    11581 agcacagcct aacaatatga ttatcattat ttacgca
//
LOCUS       DABS01000090            6263 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_21915, whole genome shotgun sequence.
ACCESSION   DABS01000090 DABS01000000
VERSION     DABS01000090.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6263)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6263)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6263
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(66..1795)
                     /gene="ade"
                     /locus_tag="CPT85_03520"
                     /pseudo
     CDS             complement(66..1795)
                     /gene="ade"
                     /locus_tag="CPT85_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012158256.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenine deaminase"
     assembly_gap    262..263
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2028..2303
                     /locus_tag="CPT85_03525"
     CDS             2028..2303
                     /locus_tag="CPT85_03525"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24472.1"
                     /translation="MKVFHYSMVCLICGLLVITAGCKKTPVTVVNTRSGVLINSSDFT
                     GGLQQKAVQHTSTASIEQVSQPTAKSTGNVIHLGGGYEKIEMGPLFD"
     gene            2440..2835
                     /locus_tag="CPT85_03530"
                     /pseudo
     CDS             2440..2835
                     /locus_tag="CPT85_03530"
                     /inference="COORDINATES: protein motif:HMM:PF03965.14"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2536..2537
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2766..3143
                     /locus_tag="CPT85_03535"
                     /pseudo
     CDS             2766..3143
                     /locus_tag="CPT85_03535"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2777..2790
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3152..3541)
                     /locus_tag="CPT85_03540"
     CDS             complement(3152..3541)
                     /locus_tag="CPT85_03540"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24473.1"
                     /translation="MIDIDFFKKFNDTYGHQSGDAVLRQVAQILKKNVRSTDVVCRYG
                     GEEMSIILTNTNNEDAIVTAQKICKAVSEHPLKLVNGNDVQVTISLGVSTYPQNGETT
                     QEMIKFADDCLYKAKENGRNQVGNLAP"
     assembly_gap    3545..3546
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3623..5017)
                     /locus_tag="CPT85_03545"
     CDS             complement(3623..5017)
                     /locus_tag="CPT85_03545"
                     /inference="COORDINATES: protein motif:HMM:PF05226.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24474.1"
                     /translation="MTMKKIKDKIAQYLKDKTFLRYLLYSIYIVITTCVLFVFLTHPA
                     IRGFFASIENKTFDIRQNILSPYKKVNKNIVILTIDEESHEYLFGKYGEWPISRGIYA
                     DMINYLESHKPAAVAFDLMFVKSLKSSLDEDKKLGHTMSSYDNVFTSINFDNLPYDLR
                     QPADLPDALKANIINESDINLKNDNITFSNCRAIINEILKTTPNIGHINIIRADDGIA
                     RDLPPFVSYKDDYYPHLALKVALKYLKDTEGLDINRFKIDKNANLVLGKRVIPLNYEG
                     SAILNWYGPSGLTNKNTFEYVPVWKVEKTMYEGAKLIPQDYFKGKIIYIGTSATSLFD
                     LKSVPTDRIFPGVEIHTTFLNNIFDNNFIKRVPMPVDIALSLLLSLFVGLIVIRSEST
                     VISSLVAILTGIIYLITTTLVMYYFNIWVGVIXAGFDFACVYSVLPCKIYFEITRSGV
                     YICSGHNRRAYRAI"
     assembly_gap    3743..3744
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    5076..5077
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5280..>6263
                     /locus_tag="CPT85_03550"
     CDS             5280..>6263
                     /locus_tag="CPT85_03550"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00512.23,HMM:PF02518.24,HMM:TIGR00229"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24475.1"
                     /translation="MENTDYKKILEHLDAVVIAADYDNKITYANKYFCSLFNTNCEKL
                     CGKNIFDFLPQNSDTVVIKDYTYKITKYDDTDSSYYYLTVIDNQMEKIYSDFISTVSH
                     ELRTPLTSIRGFADTMLMSFDKLDKAQVQKFLNIIKEQSNRLIKLVENLLSISKIQVQ
                     QSNLVFKSVNAISQIEQVLDIVKNQYPSHAFEMHCQGDIPNILTDENKFQQIMINLLD
                     NAAKYSYDKGSVSVSVANAKKENFVSIKVTDHGVGIEPDNLGRIFEKFTRIENHLTRK
                     TQGSGLGLYIVKNLIEKMGGQICVESSTVLPNSGSTFEVLLPAATYTNQSEK"
BASE COUNT         1960 a         1207 c         1129 g         1943 t
ORIGIN      
        1 cttaagattc tatttcaaaa aatcagtttt gtgaagggta ttgagattaa tattttataa
       61 agattttaaa caaacaaatc cgtaacctca aaactgttta catcaatgag ccccttgtcc
      121 gtaatcttaa tttcaggaat aacagacaac gataaaaatg ccatactcat aaaaggctca
      181 tctatcttgc agccgatttg ttttgcagct ttatcgagcg cctcaatatc tttttgcact
      241 tcaagtgctg ttttatcaga cnnatcaaac ccgccacagg cagtttaagg tgggcaagag
      301 ttttaccgtt ttgtacaata atttttccgc cctgtgattt cacaagctca actgctgcaa
      361 ggtacatgtc ctcatcgttt gtgcctatta ctatcatatt gtgcgagtca tgcgccacag
      421 tagatgcaat cgcacctgat ttgagcccaa aaccttttac aaacccgaga cctatatttc
      481 ctgttgcttt gtgcctttca atgacggcaa ttttgagaat atcgttttca atatcgctga
      541 cagcaaggcc gttttcaatc tttacggttt ctattgtctg ttttgtaata agctgtttag
      601 gtataacgtt tattactttt gcggttgttt tgccctgcgg ggctttgatt tgaagatctt
      661 ctctgtacaa atattttatg ttaaccgagc ctcttaaagc cggtggtttt aaattatccg
      721 tatcaatcac cattttgccg tcttttgcag caagttttcc atttttgaac accatcaatg
      781 gctcaaaatt ttccagatcc ttaaacaccg caatatctgc cctgtagccc ggagcaatag
      841 cgccaagatc agacagatta aagtattctg cggtgttaag actcgccatt tgtatagctt
      901 ttatcgggtc aaccccgttt ttgacagctt ttttaaccat tcttgaaata tgctttgcca
      961 gatgttttgg atgacggtca tctgtgacaa aaatacattt tcttgtatta agatttttca
     1021 atacgggaag caatggttcc aaatcccttg ctcctgtggc ttctctcacc atcagataca
     1081 taccaagacg cagtttttca acagcttctt caacagtggt gcactcatgg tctgagcgga
     1141 tacctgctgc aacataagcg ttaagatctt ttccggacaa atgcggagca tgcccgtcca
     1201 cacgcttgtg tttttccagc ccgagccgca ctttgctcaa aacactgctg tcgcagttta
     1261 taacaccggg aaaattcatc atctctgcaa tacctaacac ccacggagca tctattaaaa
     1321 gagcaaggtc atagctgttt aaatccacac ccgaagtctc aagagatgtt gcgggcacgc
     1381 aagaggggag agtcatataa acatcaagcg gaagattttt tgttgcttct ctcataaagc
     1441 tgataccctg cagccccatt acatttgaaa tctcatgcgg gtctgccaca acagttgtgg
     1501 tacctgatgg gacaaccatt tttgcaaact ctgaaggcat aagcattgag ctttccagat
     1561 gcacatgccc gtcaataaac gaaggcgaga cataagcgcc ttttacatcg atttcttcaa
     1621 caccgtgata atcgttgcca acgccggcaa tcacaccgtc agagattgca acatcgcctt
     1681 cataaatctc ttcagataag acattgacta tttttgcgtt ttttaaaaca aggtctgctt
     1741 gtatatcgcc ttttgcggtt tttattattt tttcttcttt attaaagttt tgaatgtcaa
     1801 aaatatccaa tttgtactcc gtaatctaat tgttcatata ttttttttat tatacaatat
     1861 tattcctcgc ataataatta agaaatgttt aaatgtatac attacaagta tgatttttta
     1921 taaaaacata gtgcatttta aaaattatat gctataatag tagtagataa aattacaggt
     1981 ttttgacaat ccaaagagtg tgtttacgtt aaacgggtat agctgaaatg aaagtttttc
     2041 actacagtat ggtatgttta atttgcggac tgctggtcat aaccgcaggc tgcaagaaaa
     2101 cccctgtgac cgttgtaaac acccgaagcg gagtcctcat aaacagcagt gattttaccg
     2161 gcggattgca gcaaaaagca gtccaacata caagcacagc tagtattgaa caggtcagtc
     2221 agcctactgc caaaagtacc ggcaacgtaa tacaccttgg cggcggctac gaaaaaatcg
     2281 agatgggtcc ccttttcgac taaaacctga ttaagaatat aatttaaaat tacatatatt
     2341 taggacaaat atgtcttcaa attgttttaa tttattttct tttgtattac tataagtgta
     2401 attgtaattt agtatgacaa taattaaaaa ggaataaaaa tgaattatac acacggcagt
     2461 ctcgaaaacg aaattttaaa aacaatttgg atgctcgaag aaattgaaga aaatgatgta
     2521 tccgtaaatg aagtannaat taacagaaat tcctcctcaa aaagagcata cacaactgtt
     2581 aaaaccgtta tggacagact tgtcgaaaag aacatgctcg tgagatacaa acagggtaaa
     2641 aaattctttt acaaaaccgt gtcttctcgc gacgaaatgg cacaacaggc tattaaaaaa
     2701 cttgcaggcc agtattttaa caacgatatg gattcattaa tcgatactgt aaaaagtatg
     2761 agcaaatgca aaactcnnnn nnnnnnnnnn ccaaagaaag acaactcaca ggcaatatta
     2821 ttattgcggt tttgacagag cggatttccg taaaaaaggg gctgctgctt tttccaaaag
     2881 gctgtgctga tccgtcagtg caagctgcgt ggcatgcgct ttgccattat gaggcggatg
     2941 aagacatacg tgcaaaagac atagaataca acaatcagca aatagaactg cttgagatga
     3001 ttgcgtttgc attcaaagac ggcagcccgc ttccacaaaa tatcattgaa gcttatcatc
     3061 catattataa agatgacccg atttcgtatg aaaccgggtt aaaaggtttt gtaaaaaagt
     3121 ttttacgctt tattaatttt taacctgtat tttaaggcgc cagattgccc acctgatttc
     3181 tgccgttttc tttggctttg taaaggcaat catcagcaaa tttaatcatt tcctgtgtag
     3241 tctctccgtt ttgcggataa gtagaaaccc caaggcttat tgtcacctgc acatcgttgc
     3301 cgttgaccag ttttagagga tgctcgctca ctgctttaca gattttttgt gcggttacaa
     3361 ttgcatcttc attgtttgtg ttggtaagaa ttatagacat ttcttccccg ccatagcggc
     3421 aaacaacatc agtgcttctt acattctttt taagaatctg tgcaacctgc ctcaaaacag
     3481 cgtcacctga ctggtgaccg tacgtatcat tgaatttttt aaaaaaatct atatcaatca
     3541 ttatnntatt aaagaaaacg gtttgttgta gcgtttacct gtttcaatat tctggagcat
     3601 ctgctcttga aaatatctgt ggttatatag ctctgtaagc ccgtctgttg tggccagagc
     3661 atatgtatac tccagatcgc gtgatttcaa aatatatttt gcaaggtagc acgctataaa
     3721 cacaagcaaa atcgaaacca gcnnatatta caccaaccca tatgttaaag taatacatta
     3781 caagagtagt ggttattaaa tagataatac ctgtcaaaat agccaccaga gaagaaataa
     3841 ccgtagactc gctcctaata acaataagac caacaaacaa gctcaaaagc aagctcaatg
     3901 caatatcaac aggcataggt actcttttta taaaattgtt atcaaatatg ttatttaaaa
     3961 aagttgtatg aatttccaca cccggaaaaa ttctatctgt cggtacgctt ttaaggtcaa
     4021 acagagaggt tgcgcttgtg ccgatgtaga taatttttcc tttaaagtaa tcttgaggaa
     4081 taagttttgc tccctcatac attgtttttt ccactttcca tacgggaacg tattcaaaag
     4141 tgtttttgtt agtcaaaccg ctcggtccgt accagttgag gatggctgaa ccctcataat
     4201 ttagaggtat aacccttttt ccaagcacaa gattggcatt tttatctatt ttaaaacggt
     4261 taatatcaag accttctgta tctttgaggt atttgagcgc aacttttaaa gccagatgcg
     4321 ggtaataatc gtccttgtat gaaacaaaag gaggcaagtc tctggctatg ccgtcatcag
     4381 ctctaatgat atttatgtga ccgatatttg gtgttgtttt aagtatctcg tttatgattg
     4441 ctctgcaatt tgaaaaagtt atattatcat ttttcaggtt tatatctgat tcgtttatga
     4501 tgtttgcttt taaagcatcg ggcaaatcag cgggctgtct caaatcgtag gggaggttgt
     4561 caaagtttat ggaggtaaaa acgttgtcgt aagaagacat tgtatgcccg agttttttgt
     4621 cttcatcaag gctgcttttt aatgatttta caaacatcaa atcaaacgcc acagcagcag
     4681 gtttgtgcga ttcaagatag tttatcatat cagcgtaaat accccttgag ataggccatt
     4741 cgccgtattt accaaaaagg tactcgtggc tttcttcgtc aattgtgagg ataacgatat
     4801 ttttgtttac ctttttatac ggagaaagga tattctggcg gatatcaaaa gttttgtttt
     4861 ctatagacgc aaaaaaacct cttattgcag ggtgtgtcaa aaacacaaac aatacacatg
     4921 ttgtgattac tatatagatg ctgtataaga ggtatcttaa aaaagttttg tcttttaaat
     4981 attgtgcaat cttgtcttta atttttttca tagtcattat taaactccag taaaagcgag
     5041 gtcaaatcaa cgagctcgtc ggggttttgc agatcnnaac aaacattctt cattaaggtt
     5101 catggttact taaactctct ctttttttaa tagtcgggta atttttaaat taatttgggg
     5161 ttattattat tttgacaaaa tttgaatatg aataaatcac cctaacaaag tagtttttaa
     5221 catgattaag aaaaccttaa ttttaatcat tttgaaaaac tcattgttat aataaagata
     5281 tggaaaatac ggattacaaa aaaatactcg aacacctcga cgctgttgtc attgcagcgg
     5341 attatgacaa caaaatcacc tatgcaaaca aatacttttg ttcgcttttt aacacaaatt
     5401 gcgaaaaatt atgcggcaaa aatatctttg actttctgcc tcaaaattcg gatacagtag
     5461 tgataaaaga ctacacgtac aaaattacaa aatacgatga cacagattct tcttactact
     5521 atcttacggt cattgataac cagatggaaa aaatctattc tgattttatt tccacagtca
     5581 gccacgagct gagaaccccg ttgaccagta taagagggtt tgcagatacc atgcttatgt
     5641 cttttgacaa actggacaaa gcacaggtac aaaagttttt gaatataata aaagagcagt
     5701 ctaacaggct gataaagctt gtggaaaatc ttttatccat ttcaaagatt caggtgcagc
     5761 agagcaacct tgtgttcaaa tcagtaaacg caatctctca aattgagcag gtgcttgata
     5821 ttgtcaaaaa ccagtaccct tcacatgctt ttgaaatgca ttgccaggga gatatcccta
     5881 acattttgac tgacgaaaac aaattccagc agataatgat taatctgctc gataatgcag
     5941 ccaaatactc ttatgacaaa ggctctgtgt cagtgtctgt tgcaaacgcc aaaaaggaaa
     6001 actttgtcag cataaaagta actgaccacg gtgtgggcat agaacccgac aaccttggcc
     6061 ggatttttga aaaatttaca agaatagaaa accacctgac aagaaaaact caaggcagcg
     6121 ggctcgggtt gtatattgta aaaaatttga tagaaaaaat gggcggacaa atttgtgtgg
     6181 aaagttccac agttctgcca aacagcggct cgacgtttga agtgcttctg cctgctgcaa
     6241 cctacacaaa ccagagcgaa aaa
//
LOCUS       DABS01000091            4052 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13776, whole genome shotgun sequence.
ACCESSION   DABS01000091 DABS01000000
VERSION     DABS01000091.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4052)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4052)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4052
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..638)
                     /locus_tag="CPT85_03555"
     CDS             complement(<1..638)
                     /locus_tag="CPT85_03555"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24460.1"
                     /translation="MNRKELLNKFYVTKEYNSLKKILANGQTSYEKYYLAKIYAQEKD
                     YKTASLIYKSINQYYEYGRCELLQGNFDNAKKIWHDIKEDSPPVMWGRSLLEFINLYV
                     INVPTFFQIRAFLEVDLDALLNAGLINYCENIVNGAHLLAQNNQESYKFIGRVFVNNE
                     YFDLAELFLKRAKDICYVDPEVHFLLAKCHLHNNDKREAKKALKTSIEKGYG"
     gene            complement(640..927)
                     /gene="csrA"
                     /locus_tag="CPT85_03560"
     CDS             complement(640..927)
                     /gene="csrA"
                     /locus_tag="CPT85_03560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015918930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator"
                     /protein_id="DAB24461.1"
                     /translation="MLVLARKVGEKIILNDDIEIIVLDSNQNTVRIGVNAPKNVTVYR
                     EELYREIKNANISSKEVTEKSVKELHELIKDRKNNFSSSTYDSLTNKISKN"
     gene            complement(971..1408)
                     /locus_tag="CPT85_03565"
     CDS             complement(971..1408)
                     /locus_tag="CPT85_03565"
                     /inference="COORDINATES: protein motif:HMM:PF02623.13"
                     /note="binds to flagellin and appears to stabilize
                     flagellin during flagella assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="DAB24462.1"
                     /translation="MNINTTKFGEINIDENLVFDFVEPIIGYDNLKKYVLVEHSEESA
                     FKWLQSVEDPALAFPVTSPAFFDIEYQFEIPTEKAEKISLNSVESLISLNIVTIPASN
                     PRKATINLLAPIIINAANKQGMQIILSNSNYPVKYSLFKEETV"
     gene            complement(1444..2193)
                     /locus_tag="CPT85_03570"
     CDS             complement(1444..2193)
                     /locus_tag="CPT85_03570"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24463.1"
                     /translation="MNLKKFVLGLTILGLMAAQTACMADKVPDSVIRTLVGKYKAQNY
                     TGCAQMSEDIIKKNPSNIYAHYYKGLAYMQLGKTEQATEAFEKVEMLNSNPTLVKYAQ
                     RGIACLQNPEDCAKYGQTNSELDKFIKSNKFYDKSVQSEVNKKKLDRIKENINEELGP
                     NKKSEMPTNDEIAQAVKTLAKLGINPMAGMNANYANPEMMEMNMLLGNNTQTNNGMNM
                     LPMLLMNQNGVQKMSPELIQTMMMSQMAPTY"
     gene            complement(2303..3259)
                     /gene="dacB"
                     /locus_tag="CPT85_03575"
     CDS             complement(2303..3259)
                     /gene="dacB"
                     /locus_tag="CPT85_03575"
                     /inference="COORDINATES: protein motif:HMM:PF02113.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="DAB24464.1"
                     /translation="MVLDPTVIDNKQWGIGWMWDDDTNALLPKYSPFTVNENKIDISI
                     EPAKNAMMPSIKNKSRYNMVIVNMLKNGSADSISPERKPWEHGDLTYIKGTVKNPVKL
                     TLPVDAPERYFVDELTSAMNSVGLKRNGTVKTAPMPAGLTKVAEVSSRPLSELIANTL
                     KNSNNLYSELIFKTAAAAYTKAQGTTEDAVEMFNKYFASIKSDKPIVVDACGISRNDL
                     ISADWTTEALNMIYKANDFDMFESFLAKPIEGTLSDRLLNISLKLRAKTGTASAISSI
                     AGYIDTKSGKKYSFAIYVQNHNKSTLDVKRFEDALINEIYKM"
     gene            complement(3256..3522)
                     /locus_tag="CPT85_03580"
     CDS             complement(3256..3522)
                     /locus_tag="CPT85_03580"
                     /inference="COORDINATES: protein motif:HMM:PF02113.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24465.1"
                     /translation="MLLLQFLSKTQKQVMLYXXHKMMNPASVQKIFTMRSAYAQLGED
                     FVFNTAAYVDSKSNLYIKLSADPSLTTGQLKILMQKVKEHYKXX"
     assembly_gap    3261..3262
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    3468..3469
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3636..>4052)
                     /locus_tag="CPT85_03585"
     CDS             complement(3636..>4052)
                     /locus_tag="CPT85_03585"
                     /inference="COORDINATES: protein motif:HMM:PF00795.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="DAB24466.1"
                     /translation="LGFTKIGLSICYDIRFPEIYRKYSKEGAQVIINVAAWSDKKPEH
                     WEIMHRARAIENQCFMVVADQTGKICGNENNLGHSMIINPWGDIVAGLEAQEACFEYT
                     INLDEVSNLRQNFPLLADRRDEDFETFNIKEIKINA"
BASE COUNT         1111 a          707 c          646 g         1584 t
ORIGIN      
        1 tagccgtaac ctttttcaat acttgttttc aaggcttttt tagcttctct tttgtcattg
       61 ttgtgaagat gacactttgc aagcaagaag tgcacttcag ggtcaacata gcagatatct
      121 tttgctcttt taaggaacaa ttcggctaaa tcaaagtact cattatttac aaaaactctg
      181 ccgataaatt tatagctttc ctgattgttt tgtgcaagca aatgtgctcc gtttacaatg
      241 ttttcacagt aatttatcag tcctgcattt aataacgcat cgaggtcaac ttccaaaaaa
      301 gccctaattt gaaaaaaagt aggtacatta atcacataaa gattaataaa ttcgagtaaa
      361 gatcgtcccc acataacagg tggcgagtct tctttaatat catgccatat tttttttgca
      421 ttatcaaaat tgccttgcaa cagttcacat ctgccgtact catagtattg gtttatgctt
      481 ttgtagatta gtgatgctgt tttataatcc ttttcttgcg cataaatttt tgcaagataa
      541 tatttttcat aagaggtttg tccattagca aggatttttt tcaggctgtt atattcttta
      601 gtgacataaa atttatttaa taattctttt ctattcatct taatttttag aaattttatt
      661 ggttaagctg tcatatgtag aacttgaaaa attgtttttt ctatctttta tcagttcatg
      721 cagctctttt acagattttt ctgttacttc tttgctgcta atattggcat tttttatctc
      781 tctgtagagt tcttctctgt atacagtaac atttttaggc gcattgacac ctattcttac
      841 tgtattctgg ttagaatcca aaacaataat ttctatatca tcatttaata taattttttc
      901 gccgactttt ctggcaagaa ccaacattgc tatatctcct atccctggtt gcttaattgt
      961 tatgtttggt ttatacagtc tcttctttaa aaagagaata tttaacagga taatttgaat
     1021 ttgaaagtat tatttgcata ccctgtttgt tggccgcatt aataattata ggcgccagca
     1081 agtttattgt cgctttgcgc ggattagatg ccggaattgt tactatatta agcgaaatga
     1141 gtgattcaac tgaattcaag cttatttttt ctgctttttc tgttggtatt tcaaactgat
     1201 attctatatc gaaaaaagca ggtgatgtaa caggaaatgc caatgcaggg tcttctactg
     1261 attgcagcca tttaaatgct gactcttcag aatgctctac aagtacatac ttttttaagt
     1321 tgtcataacc aataataggc tctacaaaat caaataccaa attttcatcg atattgattt
     1381 ctccaaattt agttgtgtta atattcattt cctctacacc cgtgtctgtt aaattatttt
     1441 taattaatat gtcggtgcca tttgtgacat catcattgtt tgaataagct caggagacat
     1501 tttttgtaca ccattttgat tcattaacaa cataggaagc atattcatcc cgttattagt
     1561 ttgtgtgtta tttccaagga gcatgttcat ttccatcatt tcaggatttg catagtttgc
     1621 attcattcct gccataggat ttattcccaa tttggcaaga gtttttactg cttgtgctat
     1681 ttcgtcatta gtcggcattt ctgatttttt gttagggccg agctcttcat tgatattctc
     1741 tttgattctg tccaatttct ttttgttaac ttctgattgt acggatttgt cataaaattt
     1801 attggatttt ataaatttat cgagttcgct gtttgtttga ccgtattttg cgcaatcttc
     1861 aggattttgc aagcaagcaa ttcctctttg tgcatattta accaaagtag ggttgctatt
     1921 caacatctca actttttcaa acgcttctgt agcttgctct gtttttccaa gctgcatgta
     1981 agcaagacct ttatagtagt gtgcataaat attagacggg ttctttttaa taatatcttc
     2041 tgacatttgg gcacagccag tgtaattttg tgccttatat ttgccaacaa gtgttcttat
     2101 aacagaatcc ggaaccttat ctgccataca ggctgtttgt gccgccatca aacctaatat
     2161 tgtcaatcct aaaacaaatt ttttcaaatt catacctcta tatcctttgt ttctaatctt
     2221 ttaataattt ttaagtataa gtcaattagt taatttaatt atataatact tttttaaaaa
     2281 aagcctaatg tatttagcct aattacattt tataaatttc atttattaat gcatcttcaa
     2341 atctttttac atcaagtgtt gatttgttgt ggttttgtac ataaatagca aagctatatt
     2401 ttttacctga ttttgtatca atgtatccgg caatagagct tatggcactt gctgtacctg
     2461 tttttgctct cagtttaagg ctgatattga gtaatctgtc ggatagagtg ccttctattg
     2521 gttttgccaa aaatgattca aacatatcaa aatcgtttgc tttataaatc atatttaaag
     2581 cttctgttgt ccaatctgct gaaattaaat catttcttga aataccgcaa gcatcaacaa
     2641 caattggttt atcagacttt attgatgcaa aatatttgtt gaacatttct actgcatctt
     2701 ctgttgtacc ctgtgctttt gtgtaggctg cagctgcagt tttgaaaatt aattccgaat
     2761 aaaggttatt gctgtttttt aatgtatttg caataagctc gcttaacggt ctgctggaca
     2821 cttcggcaac ttttgttaag ccggcaggca ttggagctgt tttaactgtt ccgtttcttt
     2881 ttaaccctac agaattcatt gcagatgtta attcatctac aaaatacctt tcaggtgcat
     2941 ctacgggaag agttagcttt accggatttt taacagtgcc ttttatatat gttaaatcac
     3001 cgtgttccca aggttttctt tccggtgata ttgagtcagc agagccattt tttaacatgt
     3061 taacaatcac catattataa cggcttttgt ttttgataga aggcatcatc gcattttttg
     3121 caggttctat acttatatca attttatttt cgttaacagt aaaaggtgaa tattttggta
     3181 aaagtgcatt tgtatcatca tcccacatcc agccgatgcc ccattgtttg ttatcaatga
     3241 cagtagggtc aagcactata nntttttgta gtgttcttta actttttgca taagtatttt
     3301 aagttggccg gtagttaaag aaggatctgc cgagagtttt atatataagt tgctttttga
     3361 atcaacatag gcagctgtgt taaagacaaa gtcttctcca agttgagcat aagcacttct
     3421 cattgtgaat attttttgca cggaagccgg gttcatcatt ttgtgttnna tatacaacat
     3481 gacctgtttt tgcgtctttg acagaaactg caacagtagc attgttgtta atatctgatt
     3541 tttttattat cgaatccaaa ttagccgcaa atgatgaatt tgcgcatata aaaagcatcg
     3601 caattactgc aataaattgt attttgtatt taagtttatg catttatctt tatctccttt
     3661 atgttaaatg tttcgaaatc ttcatctctt ctgtcggcaa gcaaagggaa gttttgtctc
     3721 aggtttgaaa cctcatcaag gttaattgta tattcaaaac aagcttcctg tgcttcaagc
     3781 cctgctacaa tgtctcccca gggattaatt atcatagagt gccccagatt attttcattg
     3841 ccgcatattt ttccggtctg gtctgcaact accataaaac attggttttc aatagctctt
     3901 gctctgtgca ttatttccca gtgttcgggt tttttatcag accaggctgc tacattaatt
     3961 attacctgcg caccttcttt ggagtatttt ctgtatatct cggggaatct tatgtcgtaa
     4021 caaatagaca gtcctatttt tgtaaaacct aa
//
LOCUS       DABS01000092            5820 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_20573, whole genome shotgun sequence.
ACCESSION   DABS01000092 DABS01000000
VERSION     DABS01000092.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5820)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5820)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5820
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..1042)
                     /gene="flhB"
                     /locus_tag="CPT85_03590"
     CDS             complement(<1..1042)
                     /gene="flhB"
                     /locus_tag="CPT85_03590"
                     /inference="COORDINATES: protein motif:HMM:PRK05702.1-4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="DAB24444.1"
                     /translation="MADEKTEEATPRRREDERKKGNVAKSQDMTSALTITSGVGLMFV
                     LSPMIMEKLKNLLYYTLTHLNPNEIETNDIITIFAPYAKVTGEMLLPFFLGLVVATIL
                     VVRLQVGSIFSTEKIKPKIDKLTPSSMVNALKKMFNPFEPKNMVEITKSFLKMGIVGY
                     VGFSTVMGRKDELLGLLGVDIPTAFAVLAGILTQMIINICVAMLIIGFIDKKYQDYEY
                     NKSIKMTKQEIKDEWKNMEGDPLIKSKIKSAQMQFMRQKMMSAVPNADVVVANPTHFS
                     VALKYDKDIAPAPVVVAKGVDYMAFKIREIAKANNVPIVENKPLARSLYKLVQVDQVI
                     PAELYVAVAEILA"
     gene            complement(1071..1856)
                     /gene="fliR"
                     /locus_tag="CPT85_03595"
     CDS             complement(1071..1856)
                     /gene="fliR"
                     /locus_tag="CPT85_03595"
                     /inference="COORDINATES: protein motif:HMM:TIGR01400"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="DAB24445.1"
                     /translation="MQPNLLTLLSPANIIIFVIIFTRISGMIFSMPLISTYPIPEQVK
                     IWLGALVSFILFPMVAAHSGFVVPQSMPELLLYLFREFAIGYIIGFCATFLFAAVQIG
                     GEFVSIQVGISMSQVLDPTTGESTQILSQMYTYLAAMVFVGLNAHQWLFAALYKSFQA
                     FPPGTDFVFTGSIVSQVLHMSASMFSIGISMILPIFCVMFVSEVLMGFMSKMMPQMNI
                     FMVAIPLKIYVGIVLMLMFLSPTVTYLITVTQTYLKNILNLFV"
     gene            complement(1871..2140)
                     /gene="fliQ"
                     /locus_tag="CPT85_03600"
     CDS             complement(1871..2140)
                     /gene="fliQ"
                     /locus_tag="CPT85_03600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013910111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliQ"
                     /protein_id="DAB24446.1"
                     /translation="MEDTVFLTLTQNVLILILILSTPILVVSMVVGLLISVFQAVTQI
                     QEATLTFVPKIIAGILTLIILLPWMLNMFVARCTEMFEYVQTMIK"
     gene            complement(2156..2917)
                     /gene="fliP"
                     /locus_tag="CPT85_03605"
     CDS             complement(2156..2917)
                     /gene="fliP"
                     /locus_tag="CPT85_03605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013780498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliP"
                     /protein_id="DAB24447.1"
                     /translation="MRNFKNILKIFSAMLAAFCTNSAAHAAVAFPTISVGMTQANTPQ
                     EFTQGVQILILLTILTLAPSIFIMCTAFIRIIIVLALTRQAIGTSTLPPNQVLAGLAL
                     LLTFFVMAPTFNKMNETAIQPYMKNQITQQVALDKAIIPLREFMIAHTEEKELGLFLS
                     MAKIEKPKDWKDVPTYTLIPAYVLSELKTSFKIGFVIFLPFLVIDIVVASILVSMGML
                     FLPPTTVAMPFKLILFVMIDGWYLVTKTLLEGFIT"
     gene            3080..3937
                     /locus_tag="CPT85_03610"
                     /pseudo
     CDS             3080..3937
                     /locus_tag="CPT85_03610"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel protein MscS"
     assembly_gap    3643..3655
                     /estimated_length=13
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3997..4395
                     /gene="rsfS"
                     /locus_tag="CPT85_03615"
     CDS             3997..4395
                     /gene="rsfS"
                     /locus_tag="CPT85_03615"
                     /inference="COORDINATES: protein motif:HMM:TIGR00090"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="DAB24448.1"
                     /translation="MTDISSYKLASVIARILDDKLGKDITILNISNVSVLADYFVICS
                     ADTNTQVKSLTGYVRDRIKHLFDRIPTGEENDLKNRWNLLDYGDVIVHVLHREERETY
                     ALEKFWSHAHKVEKEAWEEESKEYSEYDNA"
     gene            4497..5633
                     /locus_tag="CPT85_03620"
     CDS             4497..5633
                     /locus_tag="CPT85_03620"
                     /inference="COORDINATES: protein motif:HMM:PF09989.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA protein activase"
                     /protein_id="DAB24449.1"
                     /translation="MAKKSKEKIKVAFPHMGNIYVAWGSALRRLGVEPYIPPYSSKRT
                     LSLGTKNSPESICLPYKLILGNFIEAIEGGADYVAMISSPGICRLGEYGAGIQNTLED
                     MGYHANYIELQLYDGIKGMFRFLTELTDVKNPVTIIRAIVFAFRKVFAADRMENLLSY
                     YRAREVKVGDAEKAFKKGMKLIYEANHYSELKKAEKQAKEMITKVEIDPKREVLHVDL
                     TGEIYMVQDPFSNQNIERELGKMGVQTRRTLTISSFLKDAIIPKMFVKGETHLERAFR
                     LAKPYLSRDIGGDSLECVSDIIYANEKGKDGIIHISPFTCMPEIMSQNFFPAMRENCE
                     IPILPLIMDEQTGKAGYITRLEAFVDLMRRRKRKKEQELAASAK"
BASE COUNT         1897 a         1107 c         1105 g         1698 t
ORIGIN      
        1 atgcaagaat ctctgctact gcaacgtaca gctctgccgg gataacctga tcaacctgaa
       61 caagcttgta taaagagcgc gcaagcggtt tgttttctac aatggggaca ttgtttgctt
      121 ttgcaatttc tctgatttta aaagccatat aatccacacc cttggccaca acaaccggtg
      181 cgggtgcaat atctttgtca tacttgagcg caacagaaaa gtgggtgggg tttgctacaa
      241 caacatctgc attggggaca gcgctcatca ttttttgtct cataaactgc atttgagcgg
      301 atttgatttt tgacttgata agcggatccc cttccatgtt tttccactca tcttttattt
      361 cctgttttgt catttttatg gatttattgt attcgtaatc ctgatatttt ttgtcaataa
      421 atcctataat aagcattgcc acgcatatgt ttataatcat ctgggtcaaa ataccggcaa
      481 gcacggcaaa agctgtcgga atatccacac cgagaaggcc cagcagttcg tcttttctgc
      541 ccattaccgt agaaaaaccc acgtatccga caatacccat tttcaaaaat gattttgtta
      601 tttctaccat gtttttgggt tcaaatgggt tgaacatttt ttttagagca tttaccatac
      661 tgctcggggt gagcttgtct attttaggtt taattttttc agtactaaaa atagaaccta
      721 cctgcaacct taccacgagt atggttgcaa ccaccagtcc cagaaaaaac ggcaaaagca
      781 tttctccggt cacttttgca tacggagcaa aaatagtgat gatatcattt gtttctattt
      841 cattggggtt aaggtgtgta agggtgtaat aaagcaaatt tttgagtttt tccataatca
      901 ttggagacag cacaaacata aggcctacac ccgaggtgat ggtcaatgcg gaagtcatat
      961 cctgactttt tgctacgttc cctttttttc gttcgtcctc tcgccttcgc ggggtcgcct
     1021 cttccgtttt ttcgtctgcc attgtttttt atgttcccct gttcaaacct ttatacaaaa
     1081 aggttgagta tattttttaa atatgtctgc gttaccgtga tgaggtaagt aacggttggt
     1141 gatagaaaca ttaacatcaa tacgataccg acatatattt ttaacgggat tgccaccatg
     1201 aaaatattca tttgcggcat catttttgac ataaatccca tcaatacttc tgatacaaac
     1261 ataacacaga aaataggtaa aatcatgctt atgccgatag aaaacataga cgctgacata
     1321 tgaagcacct gtgacacaat gctgcctgtg aagacaaaat cagtacccgg aggaaaagcc
     1381 tgaaaactct tgtataacgc agcaaaaagc cactggtggg cattaagccc cacaaaaacc
     1441 attgcagcaa gatatgtgta catttgtgag agaatctgcg tgctttcacc tgttgtgggg
     1501 tcaagcacct ggctcatgga aatacctacc tgaatactga caaactcacc gcctatttgc
     1561 actgcagcaa acaaaaatgt tgcacaaaaa ccaataatat accctattgc aaactctctg
     1621 aataaataaa gcagaagctc aggcatgctc tgaggcacaa caaacccaga atgtgcagca
     1681 accatcggaa acagtataaa agatacgagt gcgcccagcc agatttttac ctgttccggt
     1741 attggatatg ttgaaatcaa cggcatggaa aaaatcatac cgcttattct tgtaaaaatt
     1801 attacaaaaa taatgatgtt cgccggagat aaaagtgtca gtaagttggg ctgcaagctt
     1861 ttctctcctt ttacttaatc attgtttgaa cgtattcaaa catttccgtg caccttgcaa
     1921 caaacatgtt aagcatccaa ggcaaaagta taatcaatgt gagtattccc gcaatgattt
     1981 tgggtacaaa tgtcaaagtt gcttcctgta tttgtgtaac cgcctgaaaa acgcttatca
     2041 aaagtcctac aaccatgctc acaacaagta ttggtgtaga taatatcagt atcaaaatca
     2101 aaacattctg tgtaagtgtt aaaaagactg tgtcttccat ttattttccc ttaaattatg
     2161 tgataaaacc ctcaagcaga gttttggtaa caagatacca tccgtctatc ataacgaaaa
     2221 gtataagctt gaaaggcatt gcaaccgtag tcggcggcag aaacagcata cccattgaaa
     2281 caagtatact ggccactaca atgtctatga caagaaacgg cagaaaaatt acaaacccga
     2341 ttttgaaaga ggttttaagc tcgctcaaaa cataagccgg aataagcgtg taagtaggca
     2401 catctttcca atcttttggt ttttctattt tggccatact caaaaacagc cccagctctt
     2461 tttcttccgt gtgtgcaatc ataaattcac gaagcggaat tattgccttg tccagcgcaa
     2521 cctgttgtgt aatctggttt ttcatataag gctggattgc ggtttcgttc attttattaa
     2581 acgtaggagc cataacaaaa aacgtcaaaa gcaaagccag acccgcaagc acctgattgg
     2641 gcggcagtgt tgacgtacct attgcctgac gcgtgagcgc aagtacaata attatcctga
     2701 taaacgccgt acacataata aaaatactcg gcgcaagtgt caggattgtt aacaggataa
     2761 gaatttgtac gccctgtgta aattcttgcg gagtgtttgc ctgtgtcatc ccgacagaaa
     2821 tagttgggaa tgccacagct gcgtgcgctg cactgtttgt gcaaaatgca gcaagcattg
     2881 cactaaagat ttttaaaata ttcttaaaat tcctcatagt tttccacatt ttaaatactc
     2941 aacataacag tattctatct tttattggct gttatgacta attcttaact aaacttaaac
     3001 tgtgaccgtg tgagacgggc tattgttttt tgtgttgttg tcgaataata ttatatagac
     3061 cgtgctaagg agtatcaaaa tgatagaatt cattgaacaa cacagaaatt ttatattcac
     3121 cattcttcct gattttttga ggaataaatg gacaatgatg gtgctcaata ttattatctt
     3181 tgtatttttt ataaagatag caaatatttt tattgaaaaa ttcctggata gaatctgccg
     3241 ttttaaagac gattttgaat tcaaaaaaca actggttact ttaaaatcta tagttaaatc
     3301 aattgtagat acaatcatag ctgcctttgg tgtgatgtat attttaaacg ggctcggtgt
     3361 agatataaga ccaattctta cagcagcagg ggttttgggt gttgcagtag gttttggtgc
     3421 aaagagattt tttgaagata ttattacagg catgtccatt ttgcttgaag gtcaggtgcg
     3481 tgtgggtgat tatatagaaa tttccggcca tcagggcgtt gtggaaaaag tggatataaa
     3541 actcatccag cttcgtgata ctcaaggcag agtgcactat atcaggaacg gtatggtaga
     3601 cactgttgtt aactatacaa gagactactc ctattatgtt ttnnnnnnnn nnnnnaatgt
     3661 cataaatgtt ttaaaagaaa ttgatgagga ttttagaaaa aactctaaag taaaagacta
     3721 tgtacttgct cctttagaaa tttttggact cgacagcttt gatgattctg cagtgattat
     3781 caaagccaga ataagaacct cccctataaa acaatgggaa gttggcagag aatttaacaa
     3841 atatatcaaa gcaaagtttg acgaaaaagg tatagaaatc cccttcccgc aaagaacggt
     3901 ctatcttgtc aatgagaatc aagacaatca aaactaattc atgataaaat taatttacat
     3961 cacactatta gagttaaaca ataaaggaag tataaattga ctgatataag ctcatacaaa
     4021 cttgcaagcg taatagcaag aattctcgat gacaaactgg gtaaagatat aacaattttg
     4081 aatattagca atgtgtctgt tctggcggat tattttgtga tttgctctgc tgatacaaac
     4141 acacaggtaa aatctctcac aggctatgta cgtgacagaa tcaaacacct ctttgacaga
     4201 atccccacag gcgaagaaaa tgaccttaaa aacagatgga atctgcttga ttacggtgat
     4261 gtaattgttc atgtgcttca ccgtgaagaa cgcgaaacct atgcacttga aaaattctgg
     4321 tcacatgctc ataaagttga aaaagaagct tgggaagaag aatcaaaaga atactctgaa
     4381 tacgataatg cataattttt cttaataaaa gcctgttatt gtctgtaaaa aaaatctctt
     4441 tggttatata attaggtaaa ttgacagtat agaccacagg gaagagttaa gaaataatgg
     4501 ctaaaaaatc taaagaaaaa atcaaagtag cgtttcctca tatgggaaat atttatgttg
     4561 catggggttc ggctttaaga agactgggtg tagaacctta tatccctcct tattccagca
     4621 aaagaacact ctctttaggt accaaaaaca gcccggaatc tatctgtctg ccttacaaac
     4681 ttattctcgg caactttata gaagccattg aaggcggtgc tgattacgtt gcaatgattt
     4741 cctcccccgg tatctgtcgt cttggcgaat acggtgcagg tatccaaaat acccttgaag
     4801 acatgggcta ccacgcaaac tatattgaat tacagctcta tgacggaatc aaaggcatgt
     4861 tcagattcct tacggaatta accgacgtaa aaaatcccgt cacaatcata agagcaatcg
     4921 tttttgcttt tagaaaagtc tttgcagctg acaggatgga aaacctcctt tcgtactacc
     4981 gtgcaagaga ggttaaagtc ggagatgctg aaaaagcctt taaaaaaggt atgaagctca
     5041 tctatgaagc aaaccactac agcgagctca aaaaagccga aaaacaggct aaagaaatga
     5101 ttacaaaagt ggaaatcgac cccaaaagag aagtgctcca cgtagatttg acgggtgaaa
     5161 tttacatggt gcaagacccg ttttccaacc agaatattga aagagaactc ggtaaaatgg
     5221 gtgtgcaaac aagaagaacc ctcactatct cgagcttttt aaaagatgca atcatcccaa
     5281 aaatgtttgt taaaggcgaa acccacctcg aaagagcttt cagactggca aaaccttatc
     5341 tttccagaga cattggcggt gactctttag agtgcgtttc agatattatt tatgcaaacg
     5401 aaaaaggcaa agacggcatt atccacatca gtccgtttac atgtatgcct gaaattatgt
     5461 ctcaaaactt tttccccgca atgagagaaa actgtgagat tccaatcctt cctcttatca
     5521 tggatgaaca aacaggaaaa gcaggctata ttacgcgtct tgaggcattt gtcgatttga
     5581 tgagaagacg caaaagaaaa aaagagcagg agcttgctgc cagcgccaaa tagtgttgtg
     5641 tgattcatta agaaagggct agtgcttatg cgagtatcac aatttaacaa caatacttta
     5701 acaccaaatt ttaaatgcaa aattgtttat gatgacaatt ttgaaaaatt tgccaaaaag
     5761 attatcaaaa atcaaaacga ttttgaagac cttttatttg ttcaagagtc tttgaaaacc
//
LOCUS       DABS01000093            6307 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15243, whole genome shotgun sequence.
ACCESSION   DABS01000093 DABS01000000
VERSION     DABS01000093.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6307)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6307)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6307
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(93..383)
                     /locus_tag="CPT85_03625"
     CDS             complement(93..383)
                     /locus_tag="CPT85_03625"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24435.1"
                     /translation="MHADSIKYFLTQLETADNKSKAEIENMLVNVGSAAVPVLVEQLQ
                     TVKGAVRGVVAMSLIRIGEPSVDCLKKVAQNNKDFEWVAKYLISEIKGEIAA"
     gene            complement(498..1430)
                     /locus_tag="CPT85_03630"
     CDS             complement(498..1430)
                     /locus_tag="CPT85_03630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011940897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="DAB24436.1"
                     /translation="MQYPRPVTNKRYYQFSEYLKNKFGKKVYKITLDAGFSCPNRDGT
                     ISSGGCIFCDDGGSFSRAHSNALSIEKQVEKGIHNLSTRFKAQKFMSYFQAYSNTYKP
                     VDELKKIYDASLCSDDVVGISIGTRPDCVDEQKLDLIASYTDKYETWIEYGLQSMHDK
                     TLKFINRGHDYQTFVKAFEQTKKRGIKVGVHIILGLPGETKEDMLSTIYALAKLGVDG
                     VKFHCLCIFPNTKLYDMYEQGKIKLLEEDEYIDIACDCLELLPPDTTIHRLGGNGLQA
                     IKVAPKWLNKKFEILNTIDDVLEKRNSYQGIHYK"
     gene            complement(1657..2748)
                     /locus_tag="CPT85_03635"
     CDS             complement(1657..2748)
                     /locus_tag="CPT85_03635"
                     /inference="COORDINATES: protein motif:HMM:PF01757.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24437.1"
                     /translation="MNEDFSTKVDLMKALAILLVVSGHLEFSLLGMFTPYSFQLALFF
                     FISGYLFKDKYLNDVVTFIKRRFKSLLVPYFWYNLFYMGVTILIFHLSGKFWGKPISL
                     KNFFITPFLNGHQFDLSCPLWFVTQLFMTMIAFLFIFRVLKAAKDNKFFHLAVFTILG
                     VSAIPLSKIIPVDPLNLVVIRTMFSVFFVYLGYYYRHHVEDKIDIFSAKWLGAIVALQ
                     SVLWLFNRDYDPEHGIGLSYVLVWARFDDQLIVPIITALTGIWASLFVVKILYPYMHN
                     IKFVRLMGENSYHIMANHLLVMYIITAILLHINGIPIQERSNHDIYWIYNPVQTTYLY
                     FVLTMVITTYTGVLQKNIYALMKKKFFDK"
     gene            2900..4027
                     /locus_tag="CPT85_03640"
     CDS             2900..4027
                     /locus_tag="CPT85_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006831322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24438.1"
                     /translation="MKVKFGSLTVSSERSKRSASNAGAAHAVKKGDTLYSIAKKYGVS
                     VADIVKANNIKNNHIEIGEKLVIPTKTVEKPTTVVKTAKKANVFGNGIVKDAPSLSNK
                     EATDKDVSAPAALYKGAGVHYVKAGDTFEKIEKLYGFSKGELRNYSTNSKLTTLKAGN
                     KVQLPERVHLRNINNKNDVAKALGISTGFIDHMESIEKKRTRLYDDGAGNATVGIGHH
                     AFGSFEKNFYKNRTLSNKEIYQLLAKDLAKAKNTIVKSIGQDAYDKLSVNQKEALIDY
                     VFNRGKDAFRSDDCAPLRSALKNGQYEKAAIHMYTPNTLKNDSTRLGVSKRRLYEIHH
                     FCGGKITKNIQQKVQQLYXFFCPQRLCAGRAQQRSKRAVWK"
     assembly_gap    3956..3957
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4058..5185)
                     /locus_tag="CPT85_03645"
     CDS             complement(4058..5185)
                     /locus_tag="CPT85_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001253604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="DAB24439.1"
                     /translation="MKTDTFKVEEWMNEYEQYCQYDLGNTTVQTLSLDELFSLSKINK
                     HDFCDKLCSQKLGYGCIKGSPKLKNGVANLYKTITPDDIVPTNGAAGANYLVFYSLIE
                     PSDRVISVIPTYQQLYSIPKSFGADVQFLYLKPENKFLPDIQELEKLVTKNTKLICIN
                     NPNNPTGALMDEDMLQQIADIARSVNAFVLSDEVYRGLNIGEEKTPSMADIYEKGISV
                     CSMSKIFSLAGLRLGWIACKDKSFINNCFQHREYNMISCSIPDEMLASAALDNAELIT
                     ERNRNLIKQCNKILAAWLNNEGKEHFSCVMPRGGTTALIYYDLDMPSYKFCDALSKQH
                     GVFLTPGCCFELENCFRAGYCTDKSTLKEGLLKISSFIAQL"
     gene            complement(5228..6082)
                     /locus_tag="CPT85_03650"
     CDS             complement(5228..6082)
                     /locus_tag="CPT85_03650"
                     /inference="COORDINATES: protein motif:HMM:PF07859.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipase"
                     /protein_id="DAB24440.1"
                     /translation="MDNLQKETHKDIPADVKDTQIFTENKNSIALRIIRPANNNEKLP
                     AIIYLHGGGWVMGGKESFDMLIKQLAINTNSVVIFPEYSRSPEAKYPVALKEIYSVLE
                     YIYENPDEFNIDNDSIAIAGDSAGANMATVTALKSKNQNGPKLKFQCLFYPVTNADMD
                     TKSYDLFKDGPWLSKKAMEWFFEAYAPDKESRNDIYVSPLKADEEDLKGLPPTLIITA
                     ENDVLRDEGEAYARKLDSAGVDVLNIRINGTIHDFLMLNALSDTQCAKGALNLACNML
                     KKALHKDF"
     assembly_gap    6092..6137
                     /estimated_length=46
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1901 a         1167 c         1180 g         2011 t
ORIGIN      
        1 taatttacgg ggttaagatt aaaaaaagaa ctgtatttaa tacagctctt ttttataaat
       61 tttaaattgt tccgactata taaaatgaaa cactacgcag cgatttcgcc tttgatttcg
      121 gaaattaaat attttgcaac ccattcaaag tctttgttgt tttgagcaac ttttttgagg
      181 caatcaacag aaggttcgcc gattctgatt aagctcattg caacaacgcc tcttactgca
      241 ccttttacag tttgcaattg ttcaacaaga acaggcactg ctgcagaacc tacgttaaca
      301 agcatgtttt caatttctgc tttgcttttg ttgtctgctg tttcgagttg agttaaaaaa
      361 tatttaatag aatctgcgtg catttcaatg tctccatgta atttcttatc gttgtacaca
      421 ttataaagca aatttttatc aaattcggat ttctttatct aatctttata tcgagataaa
      481 gatttggcaa aaaaccttta tttataatgt attccctgat aagaatttct cttttcaagc
      541 acgtcgtcta ttgtgtttaa gatttcaaat tttttgttaa gccattttgg ggcaactttt
      601 attgcctgta aaccgttgcc cccgagcctg tggatggttg tatcaggcgg caaaagctca
      661 aggcaatcac aggcaatgtc aatgtattcg tcttcttcga gcagcttgat ttttccctgt
      721 tcatacatgt catagagttt tgtgtttgga aaaatgcaca ggcagtgaaa cttgacaccg
      781 tcaacaccga gctttgcaag tgcgtatatt gtagagagca tgtcttcttt tgtttcgccc
      841 ggcaggccaa gtataatatg caccccgact tttataccgc gtttttttgt ttgttcaaac
      901 gctttgacaa atgtttggta atcgtgtccg cggttgataa atttcaaggt tttgtcgtgc
      961 attgattgca gcccgtattc aatccatgtt tcgtatttgt ctgtgtaaga agcaatcaaa
     1021 tccagttttt gttcgtcaac acagtcaggg cgggtgccta ttgaaatccc cacaacatcg
     1081 tcgctgcaaa gtgaggcgtc atagattttt tttaattcgt caacaggttt gtaagtgtta
     1141 gaataggcct gaaaatatga cataaatttt tgagccttaa aacgtgtaga aaggttgtgt
     1201 attccctttt ccacctgttt ttctatagaa agtgcattag aatgcgcgcg cgaaaaactt
     1261 cccccgtcgt cacaaaatat acagccgccc gaagagattg ttccgtctct gttagggcag
     1321 ctgaaacctg cgtcaagtgt tattttataa accttcttgc cgaatttgtt ttttaaatat
     1381 tcgctgaact gatagtatct tttgttagtt acagggcgcg gatattgcat gtttattgtt
     1441 cggcattttc atcatcgggc aaaacagggt aaaggtagtg ttctccgcat tttgggcata
     1501 caacttcctg ctgttttccg tcttcgagta ttgctacttc aaaaagctct ctgcagcttg
     1561 attgtacaca tcttattgcc catgaaggtc taactattct tgccataatt ctttctccgt
     1621 attatatctt ttaagcagat tttagcataa ttctggctat ttatcaaaaa actttttctt
     1681 catcagggca taaatatttt tttgcaaaac gcctgtgtaa gttgttatta ccattgtgag
     1741 aacaaaataa agatatgttg tctgcacagg gttgtaaatc cagtaaatat cgtggtttga
     1801 gcgttcttgt attggtattc cgtttatatg aagcaaaatt gccgtgataa tatacataac
     1861 aagcagatgg tttgccatga tgtggtaaga attttcaccc ataagtctta caaattttat
     1921 gttgtgcatg taggggtaaa gtatttttac aacaaacaaa gatgcccaaa tccctgtcag
     1981 agccgtgatt atcggcacaa tcaactggtc atcaaatctt gcccagacaa gtacataact
     2041 caaaccaatg ccatgttcag ggtcatagtc tctgttaaaa agccacaaaa cagactgcaa
     2101 agctactatt gcaccgagcc attttgcgct aaatatatca attttatctt caacatgatg
     2161 tctgtaataa tacccaagat atacaaaaaa caccgagaac attgttctta ttacaacaag
     2221 atttaaaggg tctacgggta tgattttgga taacggaata gcactcacac caagaattgt
     2281 aaacactgcc agatggaaaa atttgttgtc ttttgctgct ttcaagaccc tgaaaataaa
     2341 taaaaacgca atcattgtca taaaaagctg tgtcacaaac cacagcgggc atgacaagtc
     2401 aaactgatgt ccgttcaaaa acggggttat aaaaaagttt tttaaactaa tcggtttgcc
     2461 ccagaatttt ccgctaaggt gaaaaatcag tattgtaacc cccatataaa acaggttgta
     2521 ccagaaatac ggcaccagaa ggctcttaaa ccttctttta ataaaagtca ccacatcgtt
     2581 taagtatttg tctttgaaca agtaccctga aataaagaaa aacagcgcaa gctgaaatga
     2641 atacggagta aacattccaa gcagcgaaaa ctccagatgg cccgacacaa cgagcaaaat
     2701 ggccagtgct ttcatcaaat cgactttagt ggagaaatct tcattcatga cgtttatttt
     2761 gtattaaaag taaaattgtt gcaattgctt taatgattaa aatatgtaaa aaaatattac
     2821 aaatgacaac taatccttaa agtttacaaa aaataagccg ttatgcagaa tataaacaaa
     2881 aactacgcta aaaaagggaa taaaagtgaa attcggctca ctgacagttt catctgaacg
     2941 cagcaagcgg tctgcttcta acgcaggcgc ggctcatgct gtcaaaaaag gagatactct
     3001 ttattcgatt gcaaaaaaat acggtgtgag tgtggctgat attgttaaag caaacaatat
     3061 caaaaataat catattgaaa taggcgaaaa gcttgtcatt ccgactaaaa ctgtggaaaa
     3121 gccaacaaca gtcgttaaaa ccgccaaaaa agctaacgta tttggcaatg gaatagtgaa
     3181 agatgctcca tcgctttcaa ataaagaagc tactgacaaa gatgtatctg ctcccgctgc
     3241 attgtataaa ggtgcaggag ttcattatgt taaagcaggc gatacttttg agaagataga
     3301 aaaactttat ggtttttcga aaggagaatt aagaaattac agcacaaact caaaactgac
     3361 aaccctcaaa gctggcaata aggtgcaatt gcccgaacgt gttcatttgc gtaatattaa
     3421 caataaaaat gatgtggcaa aggctcttgg tataagcaca ggctttattg accacatgga
     3481 aagtattgaa aagaaacgaa cccgcctcta cgatgacggt gcaggcaatg ccacagtggg
     3541 catagggcat catgccttcg gctcttttga aaaaaatttt tataaaaaca gaacgcttag
     3601 taacaaagag atttatcagc tgcttgcaaa agaccttgca aaggccaaaa atactatcgt
     3661 taaatcaatc ggacaagatg catatgacaa actttccgta aaccaaaaag aagcattgat
     3721 agattatgta tttaacagag gcaaagatgc ttttagaagt gatgattgtg cacctttacg
     3781 aagtgcatta aaaaacggtc agtatgaaaa agccgcaata catatgtata ccccgaatac
     3841 tcttaagaac gacagtacgc gtcttggtgt gagcaaaaga aggttgtatg aaatccatca
     3901 tttttgcggc ggaaaaataa caaaaaatat acaacaaaag gtgcagcagc tttatnnctt
     3961 cttctgcccg caacgactct gtgctggccg ggcacaacaa agaagtaaaa gagctgtttg
     4021 gaaataaaat taaattgaaa tcagctgtat aacaatttta caattgtgct ataaagctgc
     4081 ttatttttag caatccttct tttagggtag atttgtccgt acaataacct gctctaaaac
     4141 agttttccaa ctcaaaacag cagccggggg ttaaaaacac accgtgttgt ttagaaagcg
     4201 cgtcacaaaa tttgtacgag ggcatatcaa ggtcataata tatcaatgct gtagttccgc
     4261 ctcgaggcat tacacaggaa aaatgttctt ttccttcatt attgagccag gctgccaata
     4321 ttttattaca ttgttttatc aaatttctgt tgcgttctgt tatcaattct gcattgtcta
     4381 aagcagcaga ggccagcatc tcatccggta tagagcatga aatcatattg tattcgcggt
     4441 gttgaaaaca gttgttaata aaacttttgt ctttgcacgc tatccagccg agccttaggc
     4501 ctgcaaggga aaagattttc gacatggagc aaacacttat tcctttttca taaatatctg
     4561 ccatagatgg tgtcttttct tcgccaatat tcaagccgcg atatacctca tcagacaata
     4621 caaaagcgtt gacagacctt gcaatatctg cgatttgctg cagcatatct tcgtccatca
     4681 atgcgcctgt agggttgttg gggttgttta tgcaaattag ttttgtattt tttgttacca
     4741 gtttttcgag ttcttgaata tctggcaaaa atttattttc aggttttaga taaagaaatt
     4801 gcacatctgc accaaacgat tttggaatcg aatacagctg ctgatatgtc ggtattactg
     4861 aaattaccct gtctgacggt tctatcagcg aataaaagac aagataattt gcccctgcag
     4921 cgccgtttgt gggcacaata tcgtcagggg tgatggtttt gtagagattt gcaactccat
     4981 tttttagctt tgggctccct ttaatgcagc cgtagccaag tttttgagag cataatttat
     5041 cacaaaaatc gtgtttattt atttttgaaa gtgaaaacaa ctcatcaagt gaaagggtct
     5101 gaacagttgt attgccaagg tcgtattggc aatactgttc atattcgttc atccattctt
     5161 caactttaaa ggtatctgtc ttcatataca gattattaaa taatctgttt tttgaggcaa
     5221 ccgtttgtta aaaatctttg tgcagtgctt ttttcagcat attacacgca aggtttagtg
     5281 cgccttttgc acactgggta tcgctaagcg cattgagcat caaaaaatcg tgtatagtgc
     5341 catttattct tatgtttagc acgtctacac ctgcggagtc gagttttctt gcataagctt
     5401 cgccttcgtc tcgcagcacg tcattttctg ctgttataat cagggttgga ggaagccctt
     5461 tcaggtcttc ttcatctgct tttaatggtg aaacatagat gtcatttcgg gattctttgt
     5521 caggagcata tgcttcaaaa aaccattcca ttgctttttt actcagccat gggccgtctt
     5581 tgaacaggtc gtacgatttt gtatccatgt cagcgttggt tacaggataa aacagacact
     5641 ggaatttaag ctttggcccg ttttggtttt ttgatttcag tgccgtaact gttgccatgt
     5701 tggctcctgc actgtcgccg gctattgcta ttgaatcatt gtctatatta aactcatcag
     5761 ggttttcgta aatatactcc agcaccgaat aaatttcttt tagtgcaacg gggtattttg
     5821 cttctggaga acgtgagtat tccgggaaaa taaccacaga atttgtgttt atggcaagtt
     5881 gttttatcag catgtcaaag ctttcttttc cgcccattac ccagcctccg ccgtgaagat
     5941 agataattgc cggcagtttt tcattattgt ttgcgggtct tattatcctg agagcaatgc
     6001 tgtttttatt ttccgtaaat atttgtgtgt cttttacatc tgcaggtatg tctttgtgag
     6061 tttctttttg cagattatcc agaaattgtc tnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     6121 nnnnnnnnnn nnnnnnncat ggatataaaa tcttctgttt ttgtagttaa atttggcaat
     6181 tttgagttag cttctgtcat ttatattctc cttttttttt gagaatatta acaggcaaaa
     6241 aaattttttc catcagaaaa aagtatagat ttatgtaata taataaaatt acaaagggtt
     6301 atttaat
//
LOCUS       DABS01000094            5157 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_11221, whole genome shotgun sequence.
ACCESSION   DABS01000094 DABS01000000
VERSION     DABS01000094.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5157)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5157)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5157
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(109..1857)
                     /locus_tag="CPT85_03655"
     CDS             complement(109..1857)
                     /locus_tag="CPT85_03655"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24422.1"
                     /translation="MKFCNGNQELVNEYMKNISAKYTTRAEIEKHMPEIMDELLNKCK
                     SEYKDALGVKSYSQYENEYNIACKKVFGKEDSKKIAQNFVKNAKTQAAYTEVGLTIAT
                     SLLLPQSSIAKTSFQKTALQYGKKAAVSNLKSKMTLTMGAMPATLTTLNAATSEEGFT
                     EQNIKEIKEKFKNGMLYGGFGAYVSGPLGNAVSNILSKKPYLFSTAVSKSMGTAAETT
                     ADVIFDGITSDVEFKDSLKQNGGFNFGMMIVGGIIHKSLNKLSVSNLNTGEYLVKDDN
                     GKTVFKAKDSNELAGFDETPKAYVDIIKNNKTELQNMCRAYLNDEIDDSILASKFENF
                     LADKMNMPAYPEIKKLQNDRADGEFDATEMTITFDTEDMGRLSKFFGTLMHEMHHFLQ
                     TKEILCNMSIDEYAKRKSIDFVNKDKLKNPEKYNTPEKLNNRITTHTRATAQAYKDAG
                     WEEVISNYPRNDFLSNEYIRAEKLMQADLNYDSSNLKSYYSNLQETEAHEINVRTELE
                     FEYSILETISKEEYETANKVYSLINDNYKDYEPLLDIKASIDADSYSLVELVKEAKSM
                     GVTKPEEIVVLLIDEN"
     gene            complement(2058..2513)
                     /locus_tag="CPT85_03660"
     CDS             complement(2058..2513)
                     /locus_tag="CPT85_03660"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24423.1"
                     /translation="MSDQIQVGKINKIHSLNSNESEDSLQFKPVVFNPEIIQDVQTDF
                     SHNREYSTKEKNELDRFLGDFLYGSSTSGLQEISNYNKSVGWLNITDRAVNSFKVYTG
                     QTDRIELEENLKQEQKDXSKTQLIQSQEHLNHKLKENLVFHTRIKTSHI"
     assembly_gap    2155..2156
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2610..>3607)
                     /locus_tag="CPT85_03665"
     CDS             complement(2610..>3607)
                     /locus_tag="CPT85_03665"
                     /inference="COORDINATES: protein motif:HMM:PF00375.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24424.1"
                     /translation="LIGLGIGHFTQPGAGLSQPANISSAYMDAVTAMGHSSHHASLTQ
                     LVIDIFPSSVVKSMAEGNLLQIVVFSLFFALAICAVGQKAKPVLDVLNSLSEIMFKFT
                     EYVMYFAPIGVFAAIASTIGNSGIGILRNYVKIVFSLYFALAVFILFIILLVCKVVKI
                     PVSGLIRTLKDPALLAFSTASSEAALPKAMEQMEKFGVPKNIVGFVMPTGYTFNLDGS
                     TLYLSMAVLFATQLVGIELAFQQQLIIMFALMFTSKGVAGVPRAALVVLAGTLSSLNY
                     PLIGVAILLGIDQILDMGRTTVNLIGNCIATIFIARWENEFDYDKMHEYLASKEV"
     assembly_gap    3608..3625
                     /estimated_length=18
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<3626..3841)
                     /locus_tag="CPT85_03670"
     CDS             complement(<3626..3841)
                     /locus_tag="CPT85_03670"
                     /inference="COORDINATES: protein motif:HMM:PF00375.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24425.1"
                     /translation="MQNIKLTRYILISLVLGIIVGVAFPAFAVKLSPLAMMFLNMVKM
                     IIAPLLFATLVIGIAGHGDIKSLGKIGF"
     gene            complement(3900..4862)
                     /locus_tag="CPT85_03675"
     CDS             complement(3900..4862)
                     /locus_tag="CPT85_03675"
                     /inference="COORDINATES: protein motif:HMM:PF00691.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body stator protein MotB"
                     /protein_id="DAB24426.1"
                     /translation="MAKKKKPEEHENLERWLVSYADFMTLLFATFVVLYALSQINVNE
                     FKKVEESLKKAFSVQSILDGGSGVMSSGESVLDASAANSMIDSLMMEYISQRYEQESY
                     DQIKKEIEDMAKSGELNGVSATIDDRGLVITITDKGILFQSGSAELSKNAEKVLETIG
                     KLIVQKFAMHAIKVEGHTDSVPISGGKYPSNWELSSARASSIVRYLINKFKILPDLMS
                     AVGYADTRPVETGKNADIAKNRRVEIVVQRNLHKNLDHYQNTYMKMGKTEQQRRRNEQ
                     IKIIREIDNKDIEALGEDIQQTYEETGSEFLDESQRIERLSNPK"
     gene            complement(4866..>5157)
                     /locus_tag="CPT85_03680"
     CDS             complement(4866..>5157)
                     /locus_tag="CPT85_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015839034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="motility protein A"
                     /protein_id="DAB24427.1"
                     /translation="GAVLGLIQVMQNLSDPSKLGAGIAVAFVATVYGVGAANLIFIPF
                     STKLKFKFKKVFLKKEMIIEGILAIQAGESPALIERKLQAYILDSHMKEEAA"
BASE COUNT         1424 a          954 c          845 g         1914 t
ORIGIN      
        1 gttcttttaa ggttttgtct tcctgtgttt tgaaaatttg aagcatagga cccgccaatc
       61 gcacataaat cttttacaaa cttattatac aacaagcatg aaaaattttt aattttcgtc
      121 gattaacaat acaactattt cttcaggttt tgttaccccc atggattttg cttcttttac
      181 aagctcaaca agtgaatatg aatcagcatc aatgcttgct tttatatcta gaagtggttc
      241 gtaatcttta tagttatcat ttattaagga atacacttta tttgctgttt catattcttc
      301 tttacttatt gtttcaagta ttgagtactc aaactcaagc tctgtcctta cattaatttc
      361 atgtgcttcg gtttcttgaa ggttggaata ataagacttg agattactgc tgtcataatt
      421 aaggtctgcc tgcataagct tttctgctct tatatattca tttgataaga aatcattgcg
      481 tggataattg cttattactt cttcccagcc ggcatctttg tacgcctgag ctgtagctct
      541 agtatgtgta gttattctat tatttaattt ttcaggtgta ttatattttt ctggattctt
      601 aagtttatct ttgtttacaa aatcaataga ttttcttttt gcatattcat ctatagacat
      661 attgcataat atttctttag tttgtagaaa atgatgcatc tcgtgcatta aagttccaaa
      721 aaacttgctt agtctgccca tatcctccgt atcaaacgta attgtcattt ctgtagcatc
      781 aaattcacca tctgccctgt cgttttgtaa ttttttaatt tcaggatatg caggcatatt
      841 cattttgtcg gctaaaaagt tttcaaattt tgatgccagt atagaatcat ctatttcatc
      901 attaagatat gctctgcaca tattttgtaa ttctgtttta ttatttttta tgatatcaac
      961 atatgcttta ggcgtttcat caaatcctgc aagttcgttg ctgtcttttg ctttaaaaac
     1021 agtttttcca ttatcatctt taactaaata ctctcctgtg tttaaatttg acacagataa
     1081 tttatttaga gatttatgga taattccacc gacaatcatc attccaaaat taaagccgcc
     1141 attttgtttt aaagagtctt taaattcaac atcacttgtt attccatcaa aaataacatc
     1201 ggcagttgtt tctgctgctg tgcccattga ttttgagaca gctgtgctga atagatacgg
     1261 cttttttgat aagatgttag atactgcatt acccaacggc cctgatacat atgctccaaa
     1321 gcctccatat agcattccgt ttttaaattt ttctttaatt tcttttatat tttgctcagt
     1381 aaagccttct tcacttgttg ctgcgttgag tgttgtgaga gttgcaggca tggctcccat
     1441 tgtaagtgtc atttttgact ttaagttaga tacagctgct ttttttccgt attgcagtgc
     1501 tgttttttga aaacttgttt ttgcaatact gctttgtggt aatagtaatg atgttgcaat
     1561 agttaatcct acttctgtgt aggctgcttg agtttttgca ttttttacaa aattctgtgc
     1621 tatttttttt gaatcttctt tgccgaatac ttttttgcag gcaatattgt actcgttttc
     1681 atattgagaa taacttttta cacctaatgc atctttatac tcggatttac atttatttaa
     1741 caattcatcc attatttcag gcatatgttt ttctatttca gctcttgtcg tgtatttggc
     1801 tgaaatgttt ttcatatatt cgtttacgag ttcttgattg ccgttacaaa atttcaatag
     1861 tgtttctccg aatttttcat gagacgatgg agatggtgct gtcaatgcgt gagccgccgg
     1921 gccctttacc tattttagag cctgtttgta ttccttctct tggcgcaaaa tattttttac
     1981 atctgaaaag ccctgcttta acccctcata tttttcgtga tatgcagtta ctcttgtata
     2041 atcttctgct gtgtttttta gatatgagat gttttgatgc gagtatggaa taccaaattt
     2101 tctttcaatt tgtgattcaa atgctcctgg ctttgaataa gctgcgtctt tgagnnatct
     2161 ttttgttctt gtttaagatt ttcttccaac tcaattctgt cagtttgtcc tgtgtaaacc
     2221 ttaaaactgt tcactgctct atctgtaata tttaaccagc ccacactttt gttgtagttc
     2281 gaaatttctt gtaaacctga tgttgatgaa ccataaagga aatctcctaa gaatctatcc
     2341 agctcattct tttctttagt tgaatattcc ctgttatgcg aaaaatcagt ttgtacatcc
     2401 tgtataattt cgggattgaa aactacaggt ttaaattgta atgaatcttc tgattcattg
     2461 ctattcagtg aatgaatctt attaatcttg cctacttgta tctggtctga catataaaat
     2521 aaaatccctt ggtttctttt aattgaaata tcggcaattt atttgttaaa ctttatatta
     2581 tagggttaat ttgtaacaat tcttaaattt tatacttctt ttgaggcaag atattcgtgc
     2641 attttgtcgt aatcaaattc gttttcccat cttgcgataa aaatggttgc aatacagtta
     2701 ccgatgaggt ttactgttgt tcttcccata tcaagaatct ggtcaatacc aaggaggatt
     2761 gcaacaccta tcaatggata gtttagactg gataaagtac ctgccagcac aacaagagca
     2821 gctcttggca cccctgcaac acctttgctt gtaaacatca acgcaaacat aatgattaat
     2881 tgctgctgaa atgcaagctc tataccgaca agctgtgttg caaaaagcac tgccatagac
     2941 aggtataatg tgcttccgtc aaggttgaag gtgtatcctg tcggcataac aaaaccaaca
     3001 atatttttgg gtacaccaaa tttttccatt tgctccattg cttttggcaa tgctgcttca
     3061 gagctggcgg ttgaaaaagc aagtaaagcc gggtctttta gtgttcttat caggcctgac
     3121 acagggattt ttacaacctt gcagacaagg agtatgataa acaaaataaa caccgcaagt
     3181 gcaaaataaa gtgaaaatac aatttttacg taatttcgca atattcctat accgctattg
     3241 cctatagtgc tggctattgc agcaaaaaca cctatgggag caaaatacat tacgtattcc
     3301 gtaaacttga acattatttc agacagcgag ttcaatacat ctaatacagg ttttgctttt
     3361 tgcccgactg cacaaattgc aagtgcaaaa aataagctga atacaacaat ttgtagcaga
     3421 ttaccttccg ccattgattt tacgacacta gaggggaata tatctatcac aagctgcgtt
     3481 aaagatgcat gatgtgagct gtggcccatt gcagtaacag catccatgta tgctgaagaa
     3541 atattagcgg gttgagaaag gcctgctcct ggttgtgtaa aatgacctat tcctaatcct
     3601 atcaacannn nnnnnnnnnn nnnnngaatc ctattttgcc aaggctttta atatcaccgt
     3661 gtccagcaat gcctataaca agtgttgcaa aaagcaatgg cgcaataatc attttgacca
     3721 tattcaaaaa catcatcgca agaggtgaaa gcttgacggc aaaagctgga aatgccactc
     3781 cgacgattat ccctaatacc aatgatatta aaatatatct agtcaattta atgttttgca
     3841 aaaaattgtc ctcttaaata ccagacaata tcattataga ataaacatgg aaattatgtt
     3901 tacttaggat tagacaatct ttctattctt tgtgattcgt ctaaaaattc acttcctgtt
     3961 tcttcgtagg tttgttggat atcttcacca agggcttcta tatccttgtt atctatttct
     4021 cttattattt tgatttgttc gtttcttctt ctttgttgtt ctgttttacc cattttcata
     4081 taagtatttt gataatgatc aagatttttg tgtaaatttc tttgaacaac aatttcaact
     4141 cgtctgtttt tggctatatc tgcatttttg ccggtttcaa caggtcttgt gtcggcatag
     4201 ccgacagctg acattaaatc aggcagaatt ttgaatttgt ttattaaata tcggacaata
     4261 gaagaggctc ttgcagagga aagctcccaa ttggatggat atttaccgcc agatataggc
     4321 acactgtctg tatggccttc tacttttatt gcgtgcattg caaatttttg tacaattagt
     4381 tttccgatag tttcgagtac tttttctgca ttttttgaca gttctgcaga gccggattgg
     4441 aataaaatgc ctttatctgt gatagtaata acaaggcctc tatcatcaat tgtggcgctt
     4501 actccgttaa gttctccgga ttttgccata tcttctattt ctttttttat ctggtcatag
     4561 gattcctgct catatctctg gctgatgtat tccatcatca gtgagtcaat catcgaattg
     4621 gctgcacttg cgtcgagcac ggattcgccg gaagacatta caccgcttcc cccatcaagt
     4681 atagattgga cgctgaatgc tttttttagt gactcttcta cttttttaaa ctcattaaca
     4741 ttgatttgag acagtgcata taaaacaaca aaagttgcaa aaagaagtgt cataaaatcc
     4801 gcataagaca caagccagcg ttctaagttt tcatgttctt ccggtttttt cttttttgcc
     4861 atttactatg ccgcttcttc tttcatgtga ctgtctaaaa tataagcctg aagttttctt
     4921 tcaatcaaag cagggctttc tcctgcctgg atagcaagaa taccttctat aatcatttct
     4981 tttttcaaaa agactttttt aaatttaaat ttaagttttg ttgaaaacgg aataaatatt
     5041 aagttggcgg caccaacacc ataaactgtt gcaacgaatg caaccgcaat acctgcaccg
     5101 agttttgacg ggtcagaaag gttttgcatt acctggatca aacctaatac tgcaccg
//
LOCUS       DABS01000095            4027 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15250, whole genome shotgun sequence.
ACCESSION   DABS01000095 DABS01000000
VERSION     DABS01000095.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4027)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4027)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4027
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(330..739)
                     /gene="ssrA"
                     /locus_tag="CPT85_03685"
     tmRNA           complement(330..739)
                     /gene="ssrA"
                     /locus_tag="CPT85_03685"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(793..1356)
                     /locus_tag="CPT85_03690"
     CDS             complement(793..1356)
                     /locus_tag="CPT85_03690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006640160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="DAB24412.1"
                     /translation="MMNFFVINGHKFYPYAKGELNHTLFEKIIEIVSPGNSVQTTIIE
                     NGYDVKEEIEKYKLADFIIFQTPMNWFSVPWSFKKYIDEVYLHNIFYKGTADYGRGGL
                     FKGKKYMYSITCNPSEDVFDNPNLFFGTQSPEDLIVALHKIQQFCGMEPVKSYFCFDV
                     VHNPDIEKYLKGLDNHLHTYVLNDRLA"
     gene            complement(1411..1728)
                     /locus_tag="CPT85_03695"
     CDS             complement(1411..1728)
                     /locus_tag="CPT85_03695"
                     /inference="COORDINATES: protein motif:HMM:PF12844.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="DAB24413.1"
                     /translation="MNIKKLLGKRIKELRKNKGITQEALSEKAGIDSKHLSRIECGVN
                     FPSLDLLSKIATILEIEPYLLFQTIHLREKSVLIKEINAVLESQSEANVRIFYKVLMD
                     IIS"
     gene            complement(2124..3491)
                     /locus_tag="CPT85_03700"
     CDS             complement(2124..3491)
                     /locus_tag="CPT85_03700"
                     /inference="COORDINATES: protein motif:HMM:PF00083.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="DAB24414.1"
                     /translation="MKIVHFWLYVIAVVASLGGLLSGYDTGVISGALLFINETWDLTD
                     FTQGFLVSSVLIGAVIGAATNGVMADIFGRKKIIIATAIIFIIGSILSAVAPNVAILI
                     LSRVMVGLAVGMVNFVVPLYLSEVSPKNIRGMLVSLYQWAITAGILFSYLINGTFAAA
                     VYNWRWMLLAGVLPATVLLIGMSFLGDTPRWLLSKKRDEEAKAIFNKIEPDSDADAEI
                     ANIKETLKEELDAKDKKIKFKKWMIMPLVVGIGIMFAQICTGINTIIYYAPTIFKISG
                     FDSNISAIYAATGIGVVNFLMTIVAIAFTDKLGRKPLLYFGLTGVMLSLIALGCAFQF
                     ADVLGDNLKWVAVGSLITYIICFACSLGPIGWILVSEVFPLRIRGAAMSLCTVANFGF
                     NFLVVFSFLPLIHRIGEACTFWMFGAVSLLCIFFVYFCVPETKGISLETIEKNWIDGV
                     PPRKF"
     gene            complement(3688..>4027)
                     /locus_tag="CPT85_03705"
     CDS             complement(3688..>4027)
                     /locus_tag="CPT85_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013192747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="DAB24415.1"
                     /translation="CNTLKCRPPENRNPLPEEKAACREYLDIQVGALKPRIILLCGNI
                     AVQSFMEGAKGITKVRGQWFDGPYGSKMMPIFHPSYLLRNESRAKGSPKWLMWQDIQE
                     IKRAYDAIKD"
BASE COUNT         1393 a          776 c          650 g         1208 t
ORIGIN      
        1 aaatgagcat aaaaaaatta aacactttaa gcaatataac acaaaatctc aacggcaaaa
       61 aacttacacc gttaaaggat tacaaaggtg ttgttctgaa attaacaagc aaagataaaa
      121 aacaaataga aaaatacaac gccgaaatag caaaacttga atgtgacctt tacaagtttt
      181 gcagatatca agatgaaccc aaaacacttc cggagaaagt atattactgg aataaaaaag
      241 atatgataga agaagcaata gacaaattgc gtgaactaat caaacaagtc aaacaaaaca
      301 ggcttgatat acaaaaatca aatttaaaat aatggagacg aggggagtcg aacccctgtc
      361 cgaaatggaa tgcagcaaac atctacgagc gtaggagtct tttatcttat tttagcaagg
      421 aaagcttcct caacctgagc taaaacaaag cagttttaag agatacgcgc cttgagaaaa
      481 gtcttgatac ggttaattct catccccgta ctgcgtcttg catagtggac tccgtacagc
      541 ggcaagctgg ccgtacagag tgggcatagt tcagtctgtc gaactatcgg ttactaagca
      601 gcgagagctg ctcttctgcc gaaattgcct tcgataacgt tgttagcgtt taatttaagt
      661 tgctcgttga taaccgagaa cagcgctcgg acccgcagtt tgatacaaac gatcaccccg
      721 tcaaatccaa aacgtcccca tatgtaagtt tcaaagtact gtaatatgta ttataccaca
      781 atttaaaacc gtttatgcaa gtctatcatt caaaacatat gtatgcagat gattgtcaag
      841 acctttaagg tatttttcaa tatctgggtt gtggacaaca tcaaaacaaa aataagattt
      901 tacgggttcc attccacaaa attgttgaat tttgtgcaaa gcaacaataa gatcctcagg
      961 actttgtgtc ccaaagaaca aatttggatt atcaaaaaca tcttcagacg gattacaggt
     1021 aattgaatac atgtattttt tacctttgaa aaggccgccc ctgccatagt ctgctgtgcc
     1081 tttataaaaa atattgtgca agtaaacttc atcaatatat tttttaaaac tccacggcac
     1141 agaaaaccag ttcatagggg tttgaaaaat tataaaatca gccagtttgt acttttcaat
     1201 ttcttctttt acgtcgtagc cgttctcaat tattgtggtt tgaacagaat tccccggtga
     1261 gacaatttct ataatttttt caaacaatgt atgatttagc tcccctttgg catagggata
     1321 aaatttatgt ccgttaatta caaaaaagtt catgatttat attaaaacca tacagaagaa
     1381 aattgcttca gtcttcaggt catagcacta ctacgaaatt atatccatca aaactttata
     1441 aaagatacga acattagcct cggattgaga ttctaaaaca gcattgattt ctttaatcaa
     1501 aacagatttt tctctcaggt gtatagtttg aaacaacaaa taaggctcaa tttccagaat
     1561 agttgctatt ttgctcaaca aatcaagaga aggaaaattc acaccacatt ctatcctgct
     1621 gagatgtttg gaatcaatac ccgctttttc tgacaacgcc tcttgagtga tacctttatt
     1681 ttttctaagt tcttttattc tttttcctaa taattttttg atattcataa caattattta
     1741 ttattacagt ctcgaatact ttgctaaaca acacaattta tcaaatttta gatacaatat
     1801 tgacatgcaa tgtcaagttg tctacaatct atgtagatgt tttaaaataa ttctgtatca
     1861 aacatcactt tgagtttaac tagattattc agttatattt ataatcggga gaatttttta
     1921 aatgctggat aaaaaaataa aatataaaat tattaaaaat gaccaacact ctatccccaa
     1981 atacataaat cttctttgca aaaaattcaa acaattcgct aaacaacctg actgttattt
     2041 tacttatact atccttaatt tccccagcac tagcctgaca caaaaaatac tattattcaa
     2101 aaggcttatt tgttaacaaa gggttaaaat tttcttggag ggactccgtc tatccaattt
     2161 ttttctattg tttctaaaga aatgcccttt gtttcaggaa cgcagaaata aacaaagaat
     2221 atacataaca gtgacacagc accaaacatc cagaaggtac atgcttctcc tattctgtgg
     2281 attagaggaa gaaaagagaa aacaacaagg aaattaaaac caaagtttgc aaccgtgcaa
     2341 aggctcatag cagcacctct tatacgaaga gggaacacct ccgaaacaag aatccaacca
     2401 ataggtccaa gactgcatgc aaaacatatg atgtaagtaa taaggcttcc aacagcaacc
     2461 catttaaggt tatcacccag tacatctgca aattggaatg cacagccaag tgcaatcaaa
     2521 ctgagcatca ctccggttag tccaaaatac aatagtggtt tgcggccgag cttgtctgta
     2581 aaagctattg caactattgt cataaggaag tttactacac caatacctgt ggctgcataa
     2641 attgcgctga tattggaatc aaagccggat attttaaaaa ttgtcggtgc ataataaatt
     2701 attgtattaa tacccgtgca tatttgggca aacataatac ctatgccgac aacaagaggc
     2761 attatcatcc attttttaaa tttaattttt ttatcttttg catcaagctc ctcttttagc
     2821 gtttctttga tgtttgctat ttcggcatct gcatcgctgt ctggttcaat tttattaaat
     2881 attgcttttg cttcttcatc acgcttttta ctgagcagcc atctgggggt atcgccaaga
     2941 aaagacatac caataagcaa aactgttgca ggcaatacac cggccaacaa catccatctc
     3001 cagttgtaaa ctgccgcagc aaaggttccg tttatcaaat aagagaacaa aatacctgct
     3061 gtaatagccc attgataaag agaaacaagc atgcctctga tattttttgg agagacctca
     3121 gaaagataca aaggtactac aaagtttacc atgccaactg caagaccaac catgaccctt
     3181 gataatataa ggattgcaac attaggagca accgcactca aaatagagcc tattataaaa
     3241 attattgcag tagctatgat aatttttttt cgtccgaaaa tatctgccat gacaccgttg
     3301 gttgctgcac caatgaccgc acctatcaat actgagctga caagaaatcc ctgtgtaaaa
     3361 tcagttagat cccatgtttc gtttataaaa agaagtgcac ctgatattac gccggtatca
     3421 taaccggaaa gtaaaccgcc taaagatgct acaacagcga taacataaag ccagaagtgg
     3481 actattttca ttattatctc cttacaaaca tcacacagaa actacttaat aaatgccatt
     3541 aattgcaaat tttaaaacat tgttgattac actataaaca attttttgga gcaatgtatc
     3601 gtttaaaaga cttatacata attttgtcag gtaacattat gttgaaatta ttaattgtat
     3661 tatttttgct gaaatttttt ggaataacta gtctttaata gcgtcatatg cacgtttaat
     3721 ttcttgaata tcctgccaca tgagccactt gggactgcct tttgctctgg attcattacg
     3781 caaaagataa gaaggatgaa aaattggcat catttttgag ccatacggcc cgtcaaacca
     3841 ttggcctctg actttggtta tgccttttgc gccttccata aaagactgta cggcaatatt
     3901 tccgcacaaa agtataattc tcggttttaa agcaccaact tgaatatcaa gatattcacg
     3961 gcatgcggct ttttcttccg gcagaggatt tctgttttcc ggcgggcggc attttaaagt
     4021 gttacaa
//
LOCUS       DABS01000096            5003 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_31148, whole genome shotgun sequence.
ACCESSION   DABS01000096 DABS01000000
VERSION     DABS01000096.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5003)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5003)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5003
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            50..721
                     /locus_tag="CPT85_03710"
     CDS             50..721
                     /locus_tag="CPT85_03710"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24401.1"
                     /translation="MINNASQNKIKEYITIVEKVAKVEHRRIPSHMVDYEELVSIGII
                     AVQAMIKNKTPEQLEKYNSSYIATAVRWAIRNELRNRYKWYTLKHSKASEDESAEGGT
                     DGDIDVSPGKVREAIYETILSIDSIAAASSDNDSPFDFIKDPHALPDEKAEIGELGKA
                     IREAIATLPQKDRLVVEYRFYRNMQVKEIAEQVGLSSSRITRIVQSALNHVREYLVAH
                     EHYGY"
     gene            724..1722
                     /locus_tag="CPT85_03715"
     CDS             724..1722
                     /locus_tag="CPT85_03715"
                     /inference="COORDINATES: protein motif:HMM:PF02518.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24402.1"
                     /translation="MINILLSVFIIVSVVLIFSLIYLLRKYKSLKKTFRKNKTALRAI
                     IKTINSVRYGNLYERVNEESFAIFPNLAQSVNSMIESIVDREDMIKEYQNDLNKKIDA
                     LKEVEQLKEDFVATLTHDLKVPILAEKNMLNFLLDNRFGELNEKQKEALLYLKNSNKE
                     LVELVEIILETYKVNETKIDLHKESVDINRLVEETTEEMKPISDTDSISINYWSEFFE
                     KVQVDEFYIKRVLKNLILNAISFSNPSSKVDVALCNDDKKIYIKITNYGKSIKKEEIK
                     HVFDKYYTTAKKFRKVGTGLGLYLSNRIVKAHKGRIFIESAPGENEYTTFIVEIKR"
     gene            complement(1723..2613)
                     /gene="sdaAA"
                     /locus_tag="CPT85_03720"
     CDS             complement(1723..2613)
                     /gene="sdaAA"
                     /locus_tag="CPT85_03720"
                     /inference="COORDINATES: protein motif:HMM:TIGR00718"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="DAB24403.1"
                     /translation="MIKSKNFEDVLNIAREKNKKLYEICELLEADTSEISTEEVRDRV
                     KIILDAMKDAIEKGLKSKEKSMSGMCGDDCAKLLERYKSGHSLFSETYQKVLTYSLAT
                     IEQNLRMGKIVACPTAGSCGIVPAVIIAIAESINAGEEEQINALITAGLIGKIVANKL
                     ALAGAVAGCQSECGVAAAMAAAGLVEMYNGTNEQILSAAALTLKNIMGLVCDPVAGLV
                     EVPCVKRNAFLSIYAVTGAELAMANIQSVIPIDEVVDAMKQVGEMMSPRLKESSEAGL
                     ATTKTGLEITQNLAKKWQEQ"
     gene            complement(2610..3290)
                     /gene="sdaAB"
                     /locus_tag="CPT85_03725"
     CDS             complement(2610..3290)
                     /gene="sdaAB"
                     /locus_tag="CPT85_03725"
                     /inference="COORDINATES: protein motif:HMM:TIGR00719"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit beta"
                     /protein_id="DAB24404.1"
                     /translation="MVEKVKTLFDVIGPVIIGPSSSHTAGAVRIGLLARKIFGEIPQK
                     VKFKLYNSFAKTGKGHGTDKGLLGGVLGMDVDNDSIKKAYDIAKKLNVHYEFEYLEDY
                     NRHPNSVDVILEGKTVKKMEISGISVGAGEVAITKINGYKFNINGDYDTLVLIYKDKP
                     GMVYRVTALLQGQNLNIASMHCDRNAKGQEASMGICLDGHITDHIMQELAKIEGVYLI
                     RNIEMLKK"
     gene            complement(3300..4961)
                     /locus_tag="CPT85_03730"
     CDS             complement(3300..4961)
                     /locus_tag="CPT85_03730"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02775.19,HMM:PF02776.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="DAB24405.1"
                     /translation="MSKIKTVDYVVQELVKLGITDVFGLPGDYNFNIVEAVEKNKDTN
                     WIGCTNELNAGYAADGYARIKGYGALVTTYGVGELSAINAIAGSFAEFVPVIKIVGVP
                     KTKDIKNKTLLHHNFSEPDYHAFERAFSNVTCTTAFLDETNAKKEIDRVLSVFINEKK
                     PVYLAIPMDICDFEIENEPEINIKKSDENILNSALNHAQKLLKKAQKPVIIADSLIER
                     FLSVNEAKEFIKTSGYPVTTFIMGQGLVNWNYENNLGTFTGRHGNKNTYDYVNSSDCV
                     ISIGAIMSDFNTFNFDMKFTPSNYIQIFGDYTVIENKRYDNVLMKDMLNRLTKIVLAK
                     NAELPKKVFEYTKAPVARGAKLDSKYIYPRIQEFLKKGDVIFIETGMVKYGFALMKQP
                     EEAMFHSQVLWGSIGWATAAAFGASVALKDTDKRVILFTGEGSHQLTAQEVSSVMRYG
                     LKPIFIILNNDGYTIERLLSNDPMASFNDIAQWDYAKFAKAFDGDIWTARAKTDKEFD
                     EALIIAAKKQKTKMCYIEIFTDKMDLPELAKRMVEQRQANKPSIS"
BASE COUNT         1546 a         1042 c          871 g         1544 t
ORIGIN      
        1 ctcaaaaacc tagtaatata aatattaaga aaaatgataa aaaataatca tgattaacaa
       61 cgcttctcaa aataaaatta aagaatatat aacaatcgtt gaaaaggtag caaaggttga
      121 acacagacgt attccttcac acatggtgga ttacgaagag cttgtgtcta tcggtattat
      181 tgctgttcag gcaatgatta aaaacaaaac acccgagcag ctggaaaaat acaacagctc
      241 ctacattgca acggctgtaa gatgggctat cagaaacgaa ttaagaaacc gctacaagtg
      301 gtatacttta aaacactcaa aagcttctga agatgaatca gcagagggcg gtacagatgg
      361 tgatattgat gtgtcaccgg gaaaagtaag agaagcaatc tacgagacta ttttgtctat
      421 agattctatt gccgctgcat cgtcagataa tgactctccg ttcgatttta tcaaagaccc
      481 tcatgctctg ccggacgaaa aagcagaaat cggagaactc ggtaaagcaa taagagaagc
      541 aattgcaacc ctgccgcaaa aagacaggct tgtcgttgaa tacagatttt acagaaacat
      601 gcaggtcaaa gaaattgcag aacaagtcgg cctgtcatct tcgcgtatta caaggattgt
      661 gcaatcagca cttaaccatg taagagaata ccttgttgcg catgaacatt acggttacta
      721 agcgtgatta atattttatt atcagtattt atcattgttt cggttgtatt aatattttcc
      781 ttaatttatt tgttaaggaa atacaaaagc ctaaaaaaaa cgttccgcaa aaacaagaca
      841 gcactgagag caatcataaa aaccataaac tccgtccgct acggaaacct ctatgaaagg
      901 gtaaacgaag aatcttttgc tattttccca aaccttgcac agagcgtaaa ctctatgatt
      961 gagtccattg tcgacagaga ggacatgata aaagagtatc aaaacgattt aaacaaaaaa
     1021 atcgacgctc taaaagaagt ggaacaactc aaagaagact ttgttgctac tttaacacac
     1081 gacttaaaag tgccgattct tgcagaaaaa aacatgctga attttctttt ggataacaga
     1141 ttcggcgagt tgaacgaaaa acaaaaagaa gccctgttat accttaaaaa ctccaacaaa
     1201 gagcttgtag agcttgtgga aattatactg gagacctaca aggtaaacga aaccaaaatt
     1261 gacctgcaca aagaaagtgt tgatatcaac aggctggttg aagagacaac agaagaaatg
     1321 aaaccaattt cagacacaga ttctatcagc ataaattact ggagcgagtt ttttgaaaaa
     1381 gtacaggtgg acgaatttta tattaaaaga gtattgaaaa accttatcct gaacgcaatc
     1441 tccttcagca acccttcatc aaaagtagac gttgcactat gcaatgatga caaaaaaata
     1501 tatataaaaa tcacaaacta cggtaaaagt attaaaaaag aagagattaa acacgttttt
     1561 gacaaatact atacaaccgc aaaaaaattc cgcaaagtag gcaccggcct tggtctttac
     1621 ctttcaaaca gaatagtaaa agcccacaaa ggcagaattt ttatagaatc tgcaccgggc
     1681 gaaaacgaat acacgacttt tattgtggag ataaaaagat aattattgct cctgccattt
     1741 tttagcaagg ttttgtgtta tttcaagccc tgtttttgta gtagccagcc ccgcttccga
     1801 gctttctttc aggcggggag acatcatttc gccaacctgt ttcatcgcgt ccaccacctc
     1861 gtctatcggg ataacggact gaatatttgc cattgcaagc tctgcacctg tcactgcata
     1921 aatagagaga aaggcgtttc tttttacaca gggcacttcg acaagccctg caacagggtc
     1981 gcaaacaagc cccataatgt tttttaaagt aagagcagct gcactcaaaa tttgctcgtt
     2041 tgtaccgttg tacatttcaa caagcccggc tgcagccatt gcagcagcaa ccccgcattc
     2101 gctctggcag cctgcaactg ctccggccag agcaagtttg tttgctacaa ttttgcctat
     2161 gagcccggct gtaattagtg cattgatttg ctcttcttct cccgcgttta ttgattctgc
     2221 tatggcaata ataactgccg gcacaatccc gcatgaacct gctgtaggac acgcaacaat
     2281 tttgcccatt cttaaattct gttctatagt tgccagagaa taggtgagca ctttttgata
     2341 ggtttcagag aacaacgaat ggccggattt gtatcgctca agcaattttg cacagtcatc
     2401 gccgcacatt ccgctcatgg acttttcttt tgatttaagc cctttttcaa tagcgtcttt
     2461 cattgcgtcc agaatgattt ttaccctatc acgcacttct tctgtagaaa tctcagaagt
     2521 gtccgcttcc agcaattcgc atatttcgta taatttttta tttttttccc gtgcaatatt
     2581 gagcacatct tcaaaatttt tcgactttat cattttttca acatttctat atttctaatc
     2641 aaataaacgc cttcgatttt tgccagctct tgcataatat ggtcggtaat atgcccgtcc
     2701 agacaaatac ccattgacgc ctcctgacct ttggcgtttc tatcacaatg catggaagcg
     2761 atgttaaggt tctgtccctg cagcaatgca gtaactctat aaaccatgcc tggcttgtcc
     2821 ttgtaaataa gcacaagcgt gtcataatca ccgtttatat taaatttgta tccgtttatt
     2881 tttgtaatgg ccacctcgcc cgcaccaacg gaaataccgc tgatttccat tttttttaca
     2941 gttttgcctt ccagaatcac atcaacggaa ttaggatgcc tgttgtaatc ttcaaggtat
     3001 tcaaattcat aatgaacatt gagttttttt gcaatgtcat aagccttttt tatactgtca
     3061 ttatccacat ccataccaag tacaccgcca agcagcccct tgtctgtgcc gtggcctttg
     3121 cctgttttag caaaagagtt gtagagttta aattttacct tttgcggtat ttcgccaaag
     3181 attttcctcg caagaagccc tatcctgaca gctccggccg tgtgagagct agatggccct
     3241 attataaccg ggcctattac atcaaaaagc gtttttactt tttccacaat ttctccaaac
     3301 tatgatattg acggtttgtt tgcctgtctt tgttcgacca tgcgttttgc aagttccggt
     3361 aaatccattt tatcagtaaa aatttcaata taacacattt ttgttttttg tttttttgca
     3421 gcaattatca aagcttcatc aaactcttta tctgtctttg cacgggcagt ccagatatca
     3481 ccgtcaaagg cttttgcaaa ttttgcatag tcccattgtg caatgtcgtt aaaagaagcc
     3541 atagggtcat tagataacaa tctttctatt gtatagccgt cattatttag tattataaaa
     3601 atcggtttta aaccgtaacg cattacagag cttacctcct gtgccgtaag ctggtgagac
     3661 ccctcgcctg taaaaagaat aactctttta tccgtatctt ttagcgcaac actcgcgcca
     3721 aaggcagcag cggttgccca gccgatagaa ccccacaaaa cctgtgagtg aaacatagct
     3781 tcttccggct gtttcataag agcaaaaccg tatttgacca tgcctgtttc aataaaaatc
     3841 acatcacctt ttttcaaaaa ttcctgaata cgcggataaa tgtattttga atcaagcttt
     3901 gcaccacgcg ccacaggggc ttttgtatat tcaaatactt ttttgggcaa ttccgcgttt
     3961 tttgcaagaa caatttttgt cagcctgttt agcatatctt tcataagaac gttgtcatat
     4021 cttttgtttt caataaccgt ataatctcca aaaatctgta tgtaatttga aggagtaaat
     4081 ttcatatcaa aattgaaggt gttaaaatca ctcattattg cacctattga tattacacag
     4141 tcggaagaat taacataatc ataagtattt ttattaccgt gtcttcccgt gaaagtcccc
     4201 agattgtttt cataattcca attgacaagc ccctgcccca taataaatgt tgtcacagga
     4261 taaccgcttg ttttgataaa ctctttggct tcatttacag acaaaaatcg ctctattaaa
     4321 gagtccgcta ttataacagg cttttgggct tttttgagca gcttttgggc atggtttaaa
     4381 gctgaattta aaatattttc atcgcttttt ttaatattta tttcaggttc attttctatt
     4441 tcaaaatcac aaatatccat aggaattgcc agataaacag gctttttttc attaataaaa
     4501 acactcaaaa ccctgtcaat ttcttttttt gcattggttt cgtcaagaaa agcggttgtg
     4561 catgttacat ttgaaaacgc tctttcaaat gcatgataat caggctctga aaaattgtga
     4621 tgaagtaatg ttttattttt tatatccttg gtttttggga ctcccacaat ctttattacc
     4681 ggaacaaatt cggcaaaact accggcaata gcatttattg cagacaactc accgacaccg
     4741 tatgttgtga caagagcacc gtagcctttt attctggcgt atccgtctgc tgcataaccg
     4801 gcattaagct cattggtgca gcctatccaa tttgtgtctt tatttttttc aacagcctct
     4861 actatgttaa aattgtaatc tccgggaaga ccgaaaacat cagtaatacc aagtttaaca
     4921 agctcttgca ctacgtagtc gactgttttg attttagaca tttttatatt ccttttgata
     4981 ttttgtttac acgtttttta ata
//
LOCUS       DABS01000097            8547 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9541, whole genome shotgun sequence.
ACCESSION   DABS01000097 DABS01000000
VERSION     DABS01000097.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8547)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8547)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8547
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..848
                     /locus_tag="CPT85_03735"
     CDS             <1..848
                     /locus_tag="CPT85_03735"
                     /inference="COORDINATES: protein motif:HMM:PF13361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24384.1"
                     /translation="TKNDCLDSQPVFALIFAIIKFCAFPWQNERIIHIINVLNNQKLF
                     IFSSADIEFVKTLKSPFILCMEDEMPSPALAKLLWDLNYWLQNSGLDTDELAHKCGCY
                     YYSGEIEKSNIYMISLILKKLSVQYPDTIQLIERLEDLSKRPILNKFKFFTDDNVENK
                     ANRGIIQIMTYHKSKGDEFDYVFIPQLSEELLPTDVEKIKINPKERFLESVKAINLKY
                     NKKDEKELKLFKAEENLRLFYVAVTRAKKKLYISCARKYKKYSRIKDTMPSILFERVL
                     TNADK"
     gene            835..1506
                     /locus_tag="CPT85_03740"
     CDS             835..1506
                     /locus_tag="CPT85_03740"
                     /inference="COORDINATES: protein motif:HMM:PF12705.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24385.1"
                     /translation="MQTNNQTTYTLGKLQMYDECPQKYKLCYIDKVHIVEPISKTQTG
                     TAIHNLINYYLKGMDVSKMVEALNSNEKKLWHNFKNSNISNYKFVDSEYAFNLKIDEY
                     WLSGRIDALFEYDGDYIIIDWKTGEKFTPDNVKFQTSFYLLCMYEILKLKGLLKKPEE
                     LSLHYVDLASDNAIRIGFDEDLYWNYKTQILNIIRKINENKNFFCNKTDNCKKCKYYR
                     ACPYY"
     gene            1540..2202
                     /locus_tag="CPT85_03745"
     CDS             1540..2202
                     /locus_tag="CPT85_03745"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24386.1"
                     /translation="MLINNSQPSFKSRCVTVKNAQDVCRAVRNNFPYVAYSKAAREAS
                     GDILKKENIFDYLVEKTKILKEYREDRQYLKNPLKFYKEILYSTFTEKLAACYELSAL
                     AEMILRMNGVKKCTKASLVSKSGKRMNHCVTYVQLSHKYDPKKVIIIDPFLQEADFLP
                     NMLVKYKGQYKHCLNPIHPKDTISLHLKPEKPLTDEEINILKEKYPQLIFKKELFKEK
                     SP"
     gene            complement(2227..2757)
                     /locus_tag="CPT85_03750"
     CDS             complement(2227..2757)
                     /locus_tag="CPT85_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017300265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination-mediator protein A"
                     /protein_id="DAB24392.1"
                     /translation="MVPIDDLDKVSEDAANTVDQLAMELATIQQSAKRIAIIGSRNLP
                     ITHQQIIETLSFALASQGNTIITSGGSSGTNAATIRGAMKANPDKLKVILPQTIGQQP
                     SDVQDQLIGVPNIIEHSDRAMMTLADASRICNREIIDDCQQLICFLSHTSNTLHKAID
                     YAEESHKVITAFYLDX"
     assembly_gap    2230..2231
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2979..5486
                     /locus_tag="CPT85_03755"
     CDS             2979..5486
                     /locus_tag="CPT85_03755"
                     /inference="COORDINATES: protein motif:HMM:PF00580.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase PcrA"
                     /protein_id="DAB24387.1"
                     /translation="MEELLSTLNEQQREAVVEKEGALLVLAGAGSGKTKVLTTRIVNL
                     VKSGVNPYKILAVTFTNKAAKEMRERLSKMIGEEVVKKMWVGTFHNICGRILRFDIEN
                     YKSPDGKKWDNNYVIYDESDSNTIIKNAIKKLNLDDKTYAPKLVKAAISNAKSKMQDA
                     YTFSTRARDYRTQKISEIYEEYEKQLLANNAIDFDDMLLLTVNLLSTNEEVRNKYHER
                     FSHILVDEFQDTNISQYMLIKHLYSNNKAETELKNRSLCVVGDVDQSIYSWRGADYKI
                     ILNFQADYRNSKLIKLEQNYRSVATILDAANAIIVNNTERVSKNLYSTKGQGDKIDIY
                     EAQDEAGEAYFIANKIKNYASNLNDYAVLYRTNSQSRAIEEALISQGISYRMVGGLKF
                     YDRKEVKDIIAYLKLLYNRHDSQSLKRIINVPKRSIGDTTVKKLQEIANGMDYSLYEV
                     IQNIDEYDDLSAGVKSKLKAFCELLDKLDKNKNSLSLPEFIAFVIEETGYLRELKQED
                     TEEAESRIENLQELVNVARDFAPDEEDNILGEFLAQVALVSDLDETPDADNAVTLMTL
                     HAAKGLEFETVFLAGLEEGIFPHSRSLNSNTEMEEERRLMYVGVTRAKQKLYISYAKR
                     RQMWGETRYYTPSRFLAEIPENLTERNISEDSYQSQRAGSTFKQAVNKIKTDRSGYVE
                     KSTSFGKGFVAPLPNQNTQSISKVVKKKPTYTPAQPSTPAPKPSNNFVRKEAYIVKNE
                     QNKAKDEERVKKLLEDNPIKRMLEEKKAKEAALAAANESSSRSFEKGDRVFHEKFGIG
                     HIDEIKEIGSSKMYVIDFGKQGKKAVDALYANLKKFX"
     assembly_gap    5481..5482
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5528..6208)
                     /locus_tag="CPT85_03760"
     CDS             complement(5528..6208)
                     /locus_tag="CPT85_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018284533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="DAB24388.1"
                     /translation="MFKETKTHEVTTDVVIFTIKDDKLKVLLVKRAHEPFKSKWALPG
                     GYVRISETLDDAALRILKEKTNVQNIYLEQLYTFGDPLRHPTSRVITCAYFALIRSDD
                     IVLSFEENTEITEVKWHSVNSIPALAFDHKEIIEYSLKRTRERLEFCPIAFQLLPQKF
                     TLTELQKAYEMILMKKLDKRNFRKKFLSLAILKELDEYTKSGSKRPARLYSFDKITLD
                     SKRGHFFS"
     gene            complement(6323..6811)
                     /locus_tag="CPT85_03765"
     CDS             complement(6323..6811)
                     /locus_tag="CPT85_03765"
                     /inference="COORDINATES: protein motif:HMM:PF01464.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24389.1"
                     /translation="MGIDPALGLSIAKMESGFVHEKRSSFGAVGVFQLMPSTARRLGY
                     NPYYLSDNIRGGLMYYKMMYQKFGSVELALAAYNAGPGNVSKYKGVPPFAETKRFVRG
                     IMSEYYAQKANPDPAITKYQGKGTIDAVNKALTIDKDNNVLKTNANSLENLPIVTLSG
                     AI"
     gene            7272..8210
                     /locus_tag="CPT85_03770"
     CDS             7272..8210
                     /locus_tag="CPT85_03770"
                     /inference="COORDINATES: protein motif:HMM:TIGR00573"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="DAB24390.1"
                     /translation="MPRKKCIEIVLDVETTGLDYKKERIIEFAAVRLENGVIKDKYET
                     LINPQQHIRKSSMAVHGITEEMVADQPTEEEAMPGIFEFIGDYPIVAHNAIFDYNFLN
                     EASKRLYGKPIENQRIDSQFLFKEVYPEFESHGLENLMNKFGVEFDTRHRAMADTIGL
                     AQAYPKLKKLYEKKYDWQMKQIDNIEYLFERFLRIQQAVQTMQSEIQDLKSIFKLYFD
                     EGGKPVEATTGETLVYQSKQSYSYDFVQIKDILDDIGALPKAVKLNNGFVDRLVNGKS
                     LDEETREKIKAARCDFSETRNIQVVKPDKHNNESNK"
     gene            complement(8310..8498)
                     /locus_tag="CPT85_03775"
     CDS             complement(8310..8498)
                     /locus_tag="CPT85_03775"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24391.1"
                     /translation="MINATNPFANYTLAIAAQYNDTKAGIEEAEKKPSRKIYRSLDSM
                     LEECVFLGATRFGTNFIA"
BASE COUNT         2898 a         1430 c         1546 g         2669 t
ORIGIN      
        1 taaccaagaa cgattgtctt gattctcagc ctgtttttgc tcttattttt gcaataatta
       61 agttctgcgc tttcccctgg caaaatgaac gcataattca tattattaat gttttgaaca
      121 atcaaaaact gtttattttt agctctgctg atattgagtt tgtaaaaaca cttaaatctc
      181 cttttatcct ttgtatggaa gatgaaatgc cttctcctgc tttggcaaaa cttttgtggg
      241 atttgaatta ctggcttcaa aattccggac tggatacaga tgagcttgcc cacaaatgcg
      301 gctgctatta ttattctggc gaaatagaaa agtctaatat ctacatgatt tctttgatat
      361 taaaaaaatt gtctgttcaa taccctgata caattcagct tatagaaagg cttgaagacc
      421 tttctaaacg ccctatttta aacaaattta aattttttac ggatgataat gttgaaaata
      481 aagcaaacag gggaattata caaataatga catatcataa atctaaaggc gatgagtttg
      541 actatgtctt tattccgcag ttgagcgaag aattgttgcc aacagatgtg gaaaaaataa
      601 aaattaaccc aaaagaacgt tttcttgaat cagtaaaagc tataaactta aaatacaata
      661 agaaagatga aaaagagctt aagctgttca aagcagaaga aaacctgcgt cttttttatg
      721 tagctgtgac aagagcaaag aaaaaacttt acatatcttg tgcacgaaag tataagaaat
      781 attcaaggat aaaagataca atgccttcta ttctctttga aagggttttg acaaatgcag
      841 acaaataacc agacaacata tacactcggc aagcttcaaa tgtacgatga gtgccctcaa
      901 aaatacaaat tatgttatat agacaaagtt catattgtag agcctatttc taaaacccaa
      961 accggtacag ccattcacaa tttgataaac tactatctaa aaggtatgga tgtatctaaa
     1021 atggttgaag ctttgaacag taatgaaaaa aaactgtggc ataatttcaa aaatagcaat
     1081 atttccaatt acaaatttgt tgacagtgaa tatgctttta acttaaaaat agatgaatac
     1141 tggctatcag gaagaattga cgcacttttt gagtatgacg gcgattatat tatcatagat
     1201 tggaaaacgg gtgaaaaatt tacgcctgac aatgtaaaat tccaaacatc tttttatctt
     1261 ttatgtatgt acgaaatttt aaagttaaaa ggactgttaa aaaagcctga agagctctca
     1321 cttcattatg ttgatctggc ttctgacaat gcaatcagga ttggttttga tgaggatttg
     1381 tactggaatt ataagactca aatattaaat ataatccgca aaattaacga aaataaaaac
     1441 tttttctgca acaaaacgga taattgtaaa aaatgtaaat attacagggc ttgcccctat
     1501 tattaggcaa taaattatat tcagctgttt tatagtttta tgcttatcaa caattctcag
     1561 ccatcgttta aatccagatg tgtaacggta aaaaatgcgc aggacgtttg tcgtgcggtg
     1621 cgcaacaatt ttccgtatgt ggcatattcc aaggcagcta gagaagcttc cggtgatata
     1681 ttaaaaaaag aaaacatctt tgattatctt gttgaaaaga caaaaatatt aaaagaatat
     1741 agagaagaca gacaatatct taaaaatcct ttgaagttct ataaagaaat tttgtattct
     1801 acttttactg aaaagctggc tgcatgttat gagctttcag ctcttgccga aatgattttg
     1861 agaatgaatg gggttaaaaa atgcaccaag gcttcacttg tatcaaaatc aggcaaaagg
     1921 atgaatcact gtgtaactta tgtacaactt tcacataagt atgaccctaa aaaagttata
     1981 atcatagacc cgtttttgca agaggctgat tttctgccaa atatgcttgt gaaatataaa
     2041 gggcaatata agcattgctt aaaccccatt catccaaaag acactatttc tttacatttg
     2101 aaaccggaaa aacctctaac tgatgaagag ataaatattt tgaaagaaaa gtatcctcaa
     2161 ttaatcttta aaaaagaatt attcaaagag aaatcgcctt aaatatttaa ggcgctcatt
     2221 aatattctan naatccaaat agaacgcagt aattacttta tgagactctt ctgcataatc
     2281 aattgctttg tgcaaagtgt ttgacgtatg cgataagaaa caaatcaact gctgacaatc
     2341 gtcaataatc tctctgttac aaatacggct tgcgtctgca agagtcatca ttgctctgtc
     2401 agagtgctca attatgttag gtactccgat gagctggtct tgtacgtcag aaggctgctg
     2461 gccgattgtc tggggtaaaa ttactttgag cttgtcggga ttagctttca tcgcacccct
     2521 gattgtcgca gcatttgtac ctgaagaacc gcccgatgtg atgattgtgt ttccttgaga
     2581 tgcaagtgca aaagacagag tttctataat ctgctggtgt gtaataggca gatttctgct
     2641 tccaatgata gcaatacgtt ttgcagactg ctggattgtt gccaattcca ttgcaagctg
     2701 gtcaacagtg tttgcagcat cttcggatac tttgtccaaa tcatcaatag gaaccataat
     2761 tgaagattgc tcttgtgatg actgttcctg attttcttta ttttcttctg acattacctt
     2821 atcctaatta aatgtgttaa ctaaactaca agtgttacat atagtatttt actaataaat
     2881 gttttttgat tatcataata atagcataaa ttgtcaaaaa taaaagtatt ttttaataaa
     2941 acacttgcaa acattagtaa aaatcgggaa gttggggaat ggaagagtta ttatcaacat
     3001 taaatgaaca gcaaagagaa gctgttgtag aaaaagaagg agcacttctt gtgcttgcag
     3061 gtgcgggcag cggaaaaacc aaagttttga caactcgtat tgtaaacctt gttaaatcag
     3121 gagttaatcc atacaaaatt cttgccgtaa catttaccaa caaagctgca aaagaaatga
     3181 gagaacgtct gtcaaaaatg ataggcgagg aagttgtaaa aaaaatgtgg gtgggtactt
     3241 ttcacaatat ctgcggaaga atcctgcgtt ttgatataga aaattacaaa agccctgacg
     3301 gcaaaaagtg ggataataac tatgttattt atgatgaatc agattctaat acaataatta
     3361 aaaatgctat aaaaaaactg aatcttgatg acaaaacata tgctccaaaa ctagttaaag
     3421 cggcaataag caatgcaaaa agcaaaatgc aagatgccta taccttttct accagagcaa
     3481 gagattacag aacacaaaaa atatcagaaa tatacgaaga atacgaaaag cagctccttg
     3541 caaataacgc aatagacttt gatgatatgc ttcttttgac agttaatctt ctttcaacaa
     3601 atgaagaagt aagaaacaag tatcacgaaa gattctctca cattcttgta gacgagtttc
     3661 aagatacgaa cataagccag tatatgctca tcaaacatct ttattccaat aacaaagccg
     3721 aaacagagct taaaaacaga agcctttgtg tggttggtga tgttgaccag tctatctaca
     3781 gctggcgtgg tgcagattac aagattattc tcaattttca ggctgattac agaaattcaa
     3841 aacttattaa actcgaacaa aactaccgtt ctgttgcaac aatacttgat gcagcaaatg
     3901 caataatagt caacaatact gaacgtgtga gcaaaaatct gtattctaca aaaggtcagg
     3961 gcgataaaat tgatatttat gaagctcaag acgaagccgg agaagcctac tttattgcaa
     4021 ataaaattaa gaattatgcc agcaatctca atgattacgc tgtgttatac cgtacaaatt
     4081 ctcaatcacg tgcaatagaa gaagctctga tttcgcaagg tatctcgtat cgaatggtcg
     4141 gcggtttaaa attctatgac cgtaaagaag ttaaagatat aattgcctat cttaaattgt
     4201 tgtacaacag gcatgattca cagagtttaa aaagaatcat caacgtgccc aagcgctcaa
     4261 tcggggatac taccgtaaaa aaactgcagg aaattgcaaa cggcatggat tattctcttt
     4321 atgaagttat acaaaatatc gatgaatacg atgatttgtc tgcgggtgta aagtctaaac
     4381 tcaaggcttt ttgtgaactt cttgataaac ttgataaaaa taaaaactct ctttcattgc
     4441 ctgaatttat tgcttttgta atagaagaaa caggttacct tagagagcta aaacaggaag
     4501 atacagaaga agctgaatca aggatagaaa accttcaaga gcttgtaaat gtggctagag
     4561 actttgctcc tgatgaagaa gataatatac tcggtgaatt tctggctcaa gttgcattgg
     4621 taagcgattt ggatgaaaca cctgatgcag acaatgctgt tactctgatg accttgcacg
     4681 cagctaaagg tcttgagttt gaaacagttt ttcttgcagg gcttgaagaa ggcatattcc
     4741 cgcacagccg ttcgttaaac agcaacactg aaatggaaga agaacgccgc ctcatgtacg
     4801 ttggagttac acgtgcaaaa caaaaattgt atatttcata cgccaaaaga agacaaatgt
     4861 ggggcgaaac aagatactat actcctagtc gttttcttgc agagattccg gaaaacctta
     4921 cagaaagaaa tatatcagaa gattcttatc aatctcaaag agcaggaagt acatttaaac
     4981 aggctgttaa taaaattaaa acagatagaa gcggatatgt tgaaaaatcc acatcttttg
     5041 gtaaaggttt tgttgctcct ctaccaaacc agaatactca aagcataagt aaagttgtta
     5101 agaaaaaacc cacttataca ccagctcaac cctcaacacc agctccaaag ccttctaaca
     5161 attttgttcg taaagaggct tatattgtta aaaacgaaca aaataaagcc aaagatgaag
     5221 agcgtgtaaa aaagctgctt gaggataacc ctatcaaacg tatgcttgag gagaaaaagg
     5281 ctaaagaggc tgctctggcg gctgcaaacg aaagttcatc ccgctctttt gaaaagggtg
     5341 acagagtttt tcacgaaaaa tttggcatag gccatattga tgaaataaaa gaaataggct
     5401 catcaaaaat gtacgtgata gactttggca agcagggaaa aaaagctgtt gatgcacttt
     5461 atgccaattt gaaaaagttt nnataacaaa aagctccttt ttataaggag ctttttgttt
     5521 caatttttta tgagaagaaa tgtcctcttt tggaatcaag tgttattttg tcaaaagaat
     5581 acaatcttgc aggtcttttg gagcctgatt tagtgtattc atcaagctct tttaaaatag
     5641 caagtgacaa aaatttcttt ctaaaatttc tcttatccag ctttttcatc aaaatcattt
     5701 cgtaagcttt ttgcaattct gttaaggtaa atttttgcgg aagcaattgg aatgcaatgg
     5761 gacagaattc caaacgttct cttgttcttt ttaaagagta ttcaataatc tctttgtggt
     5821 cgaacgcaag agccggaatg ctgtttacag aatgccattt tacttctgta atttctgtgt
     5881 tttcttcaaa tgaaagcaca atgtcatcgg aacgaatgag tgcaaagtaa gcacaggtaa
     5941 ttacacgtga tgtagggtga cgaagcggat caccaaaagt gtataactgt tccagataaa
     6001 tgttttgaac gtttgttttt tcttttaaaa tacgcaatgc cgcatcatca agcgtttctg
     6061 atattcttac atagccgccg ggaagagccc atttgctttt aaacggttca tgcgcacgtt
     6121 taaccaacaa tacttttaat ttatcatctt taatagtgaa aataactacg tcggtagtga
     6181 cttcatgggt ttttgtctct ttaaacatac atcctcggct tgttttgata cttttgtttc
     6241 ttatatttta ttccaaacaa aaagcatttt gtagtttttt ataaaaattt acaaaatgct
     6301 tttgttttaa ttttcttttg gcttaaattg cgcctgatag tgttacaatc ggtaaattct
     6361 ctaaagagtt tgcatttgtt ttaagtacat tgttgtcttt atcgattgtt agtgctttgt
     6421 ttaccgcatc tattgtacct ttgccctgat attttgtaat tgccgggtca ggatttgcct
     6481 tttgtgcgta atattcgctc atgattcctc ttacaaaacg ttttgtctct gcaaaaggcg
     6541 gtacaccttt gtatttgctg acattgcctg gtcctgcgtt gtaagctgca agagccagct
     6601 ctacagaacc aaatttctgg tacatcattt tgtaatacat taatcctccg cgaatattat
     6661 cgctcagata atacgggttg tatcccaatc ttcttgccgt agatggcatc aactggaaaa
     6721 cacctactgc accgaatgag cttctttttt catgtacaaa gcccgattcc atctttgcaa
     6781 tgctcaaacc caaagcagga tctatgccca tttccaaaga gtgttttaca atgtaatctt
     6841 tgactgtggc ttttgaagtt tctgcttgtg attgatttgg atttaaaatg caaagaatga
     6901 atagtaaggt tagtgttagt aactttctaa tcaaatgtta atcctctgtt ttgtaacttg
     6961 aaacggacgg ctgttttgcc tgactcttaa tttgtgtaat ttttttatgt ctttttacac
     7021 aaacccggag tcccgtaaac gcgatttttt agtccgattg ctttgacgtt cacaactgat
     7081 ttcaaaaatc gagttctttg ttatattact tcataaagat aaaaagtcaa gcccctagac
     7141 cttttgcgcc cttttaaccc ttttgtggct tgctttttac aacaatttta ttttgcttca
     7201 aagtgtaaat tttgttaatt agatgaccga atattcgttt gtgttaatat agaaaggggg
     7261 aagatttaaa tatgccaaga aaaaaatgta ttgaaattgt ccttgatgtt gaaacaacag
     7321 gactggatta taaaaaagag agaattatag aattcgctgc agtaagattg gaaaacggtg
     7381 ttattaaaga caaatacgaa actttaataa accctcagca gcatattaga aaatccagca
     7441 tggcagtgca tggtattact gaagaaatgg ttgctgacca gcctacagaa gaagaagcaa
     7501 tgcccggcat atttgaattt atcggcgatt atccgattgt tgcccacaat gctatttttg
     7561 attataactt cttaaacgaa gcttcaaaac gcctttatgg caaacctatt gaaaatcaga
     7621 gaatagattc tcaattttta tttaaagaag tttatccgga gtttgagtct cacgggcttg
     7681 aaaatctgat gaacaaattt ggtgtcgaat ttgatacaag acacagagca atggcagata
     7741 caataggcct tgcgcaggct tatccaaagt tgaaaaaact ttatgaaaag aaatatgact
     7801 ggcaaatgaa gcagattgac aatatagaat atctgtttga aagattttta cgtattcagc
     7861 aggctgttca aacaatgcag tctgaaattc aagacctgaa atcaattttt aaactctatt
     7921 ttgacgaagg cgggaaacct gttgaagcaa caacaggaga aactcttgtg taccagtcaa
     7981 aacagtctta ttcttacgat tttgtacaga ttaaagacat ccttgatgat ataggagcac
     8041 tgcccaaagc cgtgaagctt aataacggtt ttgtcgacag gcttgttaat ggcaaaagtc
     8101 tggatgagga gacaagagaa aaaattaaag ccgcaagatg tgatttctct gaaacaagaa
     8161 atattcaggt tgtaaagccg gataaacaca ataatgagtc taataaataa taaaaaagcc
     8221 tgaacttttt gttcaggtct tttaaaatta agtctagttg ccgattcctc tatagttctc
     8281 tttatttatt gccaaatgat ttttaatgat taagcgatga agttagtacc aaatcttgtt
     8341 gcgcctaaga aaacacattc ttcaagcatt gagtcaaggc ttctgtagat ttttcttgaa
     8401 ggtttttttt ctgcttcttc aatacctgct tttgtatcat tatattgtgc tgcgattgct
     8461 aatgtgtagt ttgcgaatgg gttagttgcg ttaatcattt ctctctggcc tctgttgttt
     8521 ttctcttaca tatatataaa gtatata
//
LOCUS       DABS01000098            6636 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15316, whole genome shotgun sequence.
ACCESSION   DABS01000098 DABS01000000
VERSION     DABS01000098.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6636)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6636)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6636
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..291
                     /locus_tag="CPT85_03780"
     CDS             <1..291
                     /locus_tag="CPT85_03780"
                     /inference="COORDINATES: protein motif:HMM:PF05683.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="DAB24369.1"
                     /translation="PFSLKDKIIFYAGPCPAAPNEVIGPVGPTTSARMDTYCDLLYSN
                     GLLATIGKGERSNEAXNIKGNISPHKVGFHAFLQNVLKRRKLLLLKNWEQKL"
     assembly_gap    178..179
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            387..578
                     /locus_tag="CPT85_03785"
     CDS             387..578
                     /locus_tag="CPT85_03785"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24370.1"
                     /translation="MPFSAGNSNIQTPVKYSLPYQNNKSNDSVSFKANISEIYKLPLK
                     LDVSLKLQQCISFLXGVKI"
     assembly_gap    561..562
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            604..1797
                     /locus_tag="CPT85_03790"
     CDS             604..1797
                     /locus_tag="CPT85_03790"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24371.1"
                     /translation="MEGIQKDIKGFEGLSLKQIAFAAKDMQVLTAKQGCYNNCVHCYP
                     AARKPVKQKGGFVNSILFEDLKTYTDSYIELKDRTGINFFQTTDKKQVPYQSLFYDAD
                     AIDIAVNDLNGNIHDFPELNKMLYKATGKKGVFDTSGWNPKSRVHQERAQKIVEYYKN
                     LKHADELYQFNLSVNPFHSIYAKSVELKEKGYDKLSEKLYKIYVDRISNALFTFIPLM
                     NNSNFSVILRAFKNDVPNMKDFNESAVGKLADDILGSLLARCQNDMLQQRRVIYSHGD
                     LVEVMNNTTSKLKYISTHLISGEKVKELFLKRNPHICDADFYKLFSGPVTLSECFERL
                     KKWNSYEKAAVNYQKIIDSTGKVYLSDNYRIIPTDIQFNFVNKEKKTGGFSMTEDFIV
                     TKEMI"
     gene            complement(1840..2578)
                     /locus_tag="CPT85_03795"
                     /pseudo
     CDS             complement(1840..2578)
                     /locus_tag="CPT85_03795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015210368.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
     assembly_gap    2027..2028
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2797..4733
                     /locus_tag="CPT85_03800"
                     /pseudo
     CDS             2797..4733
                     /locus_tag="CPT85_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007934945.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
     assembly_gap    3386..3387
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    4723..4730
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4751..5380
                     /locus_tag="CPT85_03805"
     CDS             4751..5380
                     /locus_tag="CPT85_03805"
                     /inference="COORDINATES: protein motif:HMM:TIGR00329"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24372.1"
                     /translation="MIGPDVKDDIIIMALESSCDETACAIVKNGREVLANVVASQIKT
                     HQQFGGVVPEVAAREHLDAVNLIIAQAFEQSGLKPDDITAIAATVGPGLVGSLLVGLN
                     AAKALAVTYDKPFIGVNHLNAHVCANYIDTDLKPPMIALLVSGGHTQIIKVDDYLNQQ
                     IIGETIDDATGEAYDKVARLLGLPYPGGXGAKRESESISASAGKSSGRI"
     gene            5271..5744
                     /locus_tag="CPT85_03810"
     CDS             5271..5744
                     /locus_tag="CPT85_03810"
                     /inference="COORDINATES: protein motif:HMM:PF00814.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24373.1"
                     /translation="MTRLQDYWGFHIPEAXAPNGNPKAYQLPQAKVPGEFDFSFSGLK
                     TAVLNLTRKLEKELGAIPKEDVAASFQECITSTLFKKTLKAAEKYGIKQIVLGGGVAA
                     NSEIRKKFFSLEDKGYKIFAPAMKYCTDNASMIASSAYFLANTMDSLEIEVFSRC"
     assembly_gap    5315..5316
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5738..6196
                     /locus_tag="CPT85_03815"
     CDS             5738..6196
                     /locus_tag="CPT85_03815"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24374.1"
                     /translation="MLKKLVLTLAVLSIAIPAAARTNSQLGAQLYAVSRQVDKQNKAR
                     GDLMRDNIASFLIDANMLNFNENNATWKKLPSGWLYDSRSAQHLYLRHLGVYRSPDGK
                     VFGVFDVNCEDINDIQERTYGYVKTTEVYLVPSYRSLKGRSLGFIQTFCK"
     gene            6265..>6636
                     /locus_tag="CPT85_03820"
     CDS             6265..>6636
                     /locus_tag="CPT85_03820"
                     /inference="COORDINATES: protein motif:HMM:PF00215.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="DAB24375.1"
                     /translation="MGFNNTNLTAKDRIVLALDTDSLEEVERLVTLLKDYVGCFKVGP
                     QLFTSCAYDAIDLIKKLGGEIYFDGKFHDIPSTVAKAGSNLIKRGVTTFSAHLAGGTK
                     MLTTTVKVARETAKKFNMPAPT"
BASE COUNT         2163 a         1166 c         1297 g         1992 t
ORIGIN      
        1 ccttttagcc tgaaagataa aataattttc tatgcaggcc cttgtccagc tgctccaaat
       61 gaagtcatag gccctgttgg acctactaca tctgcaagaa tggatactta ttgtgatttg
      121 ttatattcaa acggtctttt ggcaacaatc ggcaagggtg agcgctcaaa tgaggcgnna
      181 aatataaagg gaaatatctc accgcacaag gtgggatttc atgccttctt gcaaaatgtg
      241 ttaaagaggc ggaagttgtt gcttttgaag aattgggaac agaagctgta agaaaattgg
      301 ttgtaaaaga ttttcctttg actgttgaaa tctaatggca aaaattattt tgtttgcatt
      361 ttattttgaa tatgaagatc aaaataatgc cgttttcggc cggtaattcc aatatacaaa
      421 cacccgtaaa atattcgtta ccgtaccaaa acaacaaatc aaatgattcg gtgagcttta
      481 aggccaatat tagcgaaatt tataaattgc ctttaaagtt agatgtttca ttaaaacttc
      541 agcaatgtat ttctttttta nncggggtca aaatctaatg ttaaaaacta ttatctaaat
      601 gctttggagg gtatacaaaa agatataaaa ggttttgaag gcttgtcttt aaaacaaata
      661 gcgtttgctg ccaaagatat gcaggttttg actgccaaac agggctgtta caataattgt
      721 gttcactgtt atcctgctgc gcgtaaaccg gtaaagcaaa agggtgggtt tgttaattca
      781 atcttgtttg aagatttaaa aacttatact gattcttata tagaattaaa agatcgtaca
      841 ggtataaact tttttcagac tactgacaaa aaacaagttc catatcaatc acttttttat
      901 gatgctgacg caatagatat tgcagtcaat gatttgaacg gaaatattca cgactttccg
      961 gaattaaata aaatgttgta taaagcaacg ggcaaaaaag gggtgtttga tacaagcgga
     1021 tggaatccaa aaagccgtgt tcatcaagaa cgtgcacaaa aaattgttga atattacaaa
     1081 aatctaaaac acgctgatga attgtatcag tttaaccttt ccgtaaatcc gtttcattca
     1141 atttatgcaa aatctgttga attaaaagag aaaggctatg acaaactgtc ggaaaaacta
     1201 tacaaaattt atgttgatag aatttcaaat gctctgttca catttattcc tttaatgaat
     1261 aatagcaatt tcagcgttat tttaagagct tttaaaaacg atgtgcctaa tatgaaagat
     1321 tttaatgaat ccgcagttgg aaaacttgct gatgatattt taggcagctt attggccaga
     1381 tgtcagaacg atatgttaca acaaagacgt gttatatatt cacacggaga tttggtcgag
     1441 gtaatgaata atactacttc aaagttaaaa tatataagta cacatctcat atcaggcgaa
     1501 aaggtaaaag aactgttttt aaaaagaaat ccacacatat gcgatgcaga tttttataag
     1561 ttattttcag ggccggtaac tttatcagaa tgctttgaac gtttgaaaaa atggaatagc
     1621 tatgaaaaag ctgctgtcaa ttatcaaaaa ataattgatt ctacgggcaa ggtttatctt
     1681 agtgataatt acagaatcat tccgactgat atacaattta actttgtcaa caaagaaaaa
     1741 aagactggcg gattttcaat gactgaagat tttattgtca caaaagaaat gatttagtgt
     1801 taaaaaaatc ccccataatt atttatgagg gatttttttt tagttaattc tttggaacat
     1861 ataacctata ccacgtgctg tcaggattaa ttccggattt gccgggtcgg tttcgagttt
     1921 tgaacgtagt cttgaaatat gaacgtcaac aactcttgta tctattctgt gatccggcgg
     1981 ataagcccat acatattgaa gaatttcatt tcttgaataa gcctggnnca agttcaagaa
     2041 ggctaaattc catacctgtt aatctgatac gttcattttt tctaaatacc tgtcttcttg
     2101 cagtatcaat tttgatgttt cctgttgtaa taacattttt agttacttta cctgtagaag
     2161 gtgcaatttc tctgtttgtt gcacgtctta aaactgattt aacgcgtgct tcaagttctt
     2221 tagggctgaa gggcttaaca acgtagtcat cagcaccgag ctcaagacct gtaattcttt
     2281 ctgaaacatc accgagagct gttaggataa tgataggaac atcagatgtt cttctgattt
     2341 ctctacaaac accgtagccg tccattttag gcatcataac gtctaaaact acgagatccg
     2401 gattttcttt attgaacaca gctacagctt cttcaccatc agcagcagta actatatcat
     2461 aaccaatcat acttaatctt gtttcaagaa ttcttctgat acttgcttca tcatcagcaa
     2521 ttagaatctt ttgttttgct tcaccttgtt cattaggaat ttcactattt ggacacatgt
     2581 taaaaaccta tctttcttta ccctatgtcg taaaccacat ttttgtaacg aattattttg
     2641 taacgtaaac aatattacaa aatattgact ttttttaaat tatattacaa ctccttaact
     2701 tagtcaactt ggagacatac tgttgagcta ttaaaattgc attactttta tggtggtgct
     2761 ataaaattaa tatgtataga aagagaggat attataatgt ctaacattga ggtaatttta
     2821 cccgacaatt caaaaatttc tttagaagat ggagcaaacg gctttgacct tgctaaaaca
     2881 attagcgaag gcttattaaa aaatgcagtt gctttagaaa ttaacggaga agtaaaagac
     2941 attcgaacga ccctctcaaa taatgacaaa gttaaaattt taactgctaa ggatcatgaa
     3001 actcttgcta tattgagaca ctctacatct cacgttatgg cccaggctgt tattgctttg
     3061 ttcccgcagg caaaacttgc cattggtcct gctattgaaa acggatttta ttatgacttt
     3121 gacttagaag gccacacttt cacggaagaa gacctctcta aaatcgaaga aaaaatgaaa
     3181 gaaattgtta aagaaaatct tacatttgaa aaatatcttg tgcctgatgt tgatgctcaa
     3241 atcaacgaat tcaaatcaca aggcgaaata tataaagctg aattgcttga agaacacaga
     3301 gaccacaaac caacattgtt ccttacaaag gataaagatg gaaactcttt gttcaatgac
     3361 ctttgtgccg gccctcacct tccaannaat tgatgaaagt cgccggtgca tactggagag
     3421 gtgacgctaa aaataaaatg cttcaaagaa tttatgcaac agcattctgg acaaaagatg
     3481 acttaaaagc ttatcttact atgttagaag aagctgaaaa acgcgaccac agaaaactcg
     3541 gttcaaaact tgatttgttc tcaacacgcg aagaattggg cggcggtctt gtgttgtggc
     3601 atccgaatct tgctgttgta agagaagaga ttgaaaacta ctggagaagc gaacacagaa
     3661 aaagaggcta tgtaattgta aacactcctc acatcgcaaa atcaaaactc tgggaaattt
     3721 caggacacgc tgaccactac agagaaaata tgttctttat ccaaaaagaa gatgactctg
     3781 aagaccagtt catactaaaa ccaatgaact gcccgttcca tattctgatt tatcaggcta
     3841 acagacactc ataccgttca ctcccattga gaatggcaga acttggtact gtatacagaa
     3901 aagaacactc aggtgctctt gccgggttaa ctcgtgtaca gggttttact caagacgatg
     3961 ctcacgtttt ttgtactcct gaacaacttg ttgatgaaat caatgaaatc atcgactttg
     4021 tagcagatac aatggctatc tttaaaatgg actttgaagt tgagctttca acccgtccgg
     4081 aaagttatgt aggtgaaatt gataactgga acagagctga agctggcttg aaagaagcta
     4141 tggacagacg cggtatgaag tatgaaatca atgaaggcga cggtgctttc tacgggccta
     4201 aaattgactt caaagttaaa gatgcaattg gcagaacatg gcagtgtgca actatccagc
     4261 tagactttaa cctgcctgaa agatttgata tcaaatatca ggataaagac ggtcagatga
     4321 aaactcctgt tatgctccac cgtgtaatct tcggttcaat ggagcgtttc cacggtatct
     4381 tgattgaaca ttatgcaggt gcattcccat tgtggttagc tcctacacag gttgctgttg
     4441 ttcctatttc aaatgacaaa cacactgatt atgcagaaaa agtttataaa gcgttgagaa
     4501 atgctggaat cagagcaaac cttgatgacc gttccgaatc aatgaactat aaaataagag
     4561 aatctctaca agataagaaa attccttatg ttgtggttgt tggcgacaag gaaattgagg
     4621 atggatctgt tgcaatcaga aaaagaggca aaggccccat cggcacactc aagattgatg
     4681 agtttgtttc aggtctttta gaagaaatca aaagcagagc atnnnnnnnn tgatatcagg
     4741 cgagccggta ttgataggcc cggatgttaa agatgacata ataattatgg ctcttgaatc
     4801 aagctgtgac gaaacggctt gtgcaattgt aaaaaacgga cgtgaagtgc tggcaaatgt
     4861 tgtagcttcg cagattaaaa cccatcaaca gtttggaggg gttgtgcccg aagttgcggc
     4921 cagagaacac ctcgatgctg ttaatttaat aatcgcacag gcgtttgaac aatccggctt
     4981 aaaaccggat gatattactg caattgctgc tacagtcggg cccggattgg tcggctcact
     5041 gcttgttggt ttaaatgcag ctaaagctct ggctgttacg tatgacaaac cttttatcgg
     5101 tgtaaaccac ctgaacgctc atgtttgtgc aaattacatt gatactgatt taaaaccgcc
     5161 aatgatagct ttgcttgtaa gcggtggtca tactcaaatt attaaggttg atgactactt
     5221 gaatcagcag attatcggtg aaaccattga cgatgccaca ggtgaagcat atgacaaggt
     5281 tgcaagacta ttggggcttc catatcccgg aggcnntggc gccaaacggg aatccgaaag
     5341 catatcagct tccgcaggca aaagttccgg gcgaatttga tttcagtttt tcaggtttaa
     5401 aaactgctgt tttaaacctc acgagaaaat tggaaaaaga actcggtgca ataccaaaag
     5461 aagatgttgc ggcaagtttt caggaatgta ttacctccac actctttaaa aaaacactca
     5521 aggctgctga aaaatacggc ataaagcaga ttgtgctagg cggaggtgtt gctgccaatt
     5581 ctgaaataag aaagaaattt ttctctcttg aagataaggg gtacaaaatt tttgctccgg
     5641 caatgaaata ctgtactgat aacgcatcta tgattgccag ctctgcgtat ttccttgcaa
     5701 atacaatgga ttcacttgag attgaagtat tttcaagatg ttaaaaaaac ttgtcttaac
     5761 tcttgcggtt ctttctatag ctatcccggc tgctgcaaga acgaattcgc agcttggtgc
     5821 acagctgtac gctgtatcac gtcaggttga taaacaaaac aaagcgcgcg gggatttaat
     5881 gcgagacaat attgcctcgt tcttgattga tgcaaatatg ctcaacttta acgaaaataa
     5941 tgctacctgg aaaaaacttc catcgggatg gctttatgat tcacgttctg ctcagcatct
     6001 ttatttgaga catcttggcg tttacaggtc tcctgacgga aaagtatttg gtgtttttga
     6061 tgttaattgt gaagacatta acgatataca ggagcgtacc tatggttatg taaaaactac
     6121 ggaagtgtat cttgttcctt cctatcgttc gctaaaaggt cggtctttgg ggtttataca
     6181 aactttttgc aaataatcgg ttgcaacttg tgttttaaaa tgctatattg ataaggctat
     6241 agcttataga taaatgggat tggtatgggt tttaacaata caaatttaac agccaaggac
     6301 cgtattgttc ttgcactgga tacagactct ttagaagaag tcgaacgatt agtaacgctt
     6361 ttaaaagatt acgtgggctg ctttaaagta ggtcctcaat tatttacttc ttgcgcttat
     6421 gacgcaattg atttgattaa aaaactgggc ggtgagattt attttgacgg taaatttcac
     6481 gatattcctt ccactgttgc aaaggcaggt tcaaacctga taaaaagagg cgtaacaact
     6541 tttagcgcac atcttgcagg cggtacaaaa atgcttacaa caacggttaa agtggcaaga
     6601 gaaaccgcaa aaaaattcaa tatgccggcg ccgact
//
LOCUS       DABS01000099           11110 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_16561, whole genome shotgun sequence.
ACCESSION   DABS01000099 DABS01000000
VERSION     DABS01000099.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 11110)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 11110)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11110
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            37..407
                     /locus_tag="CPT85_03825"
                     /pseudo
     CDS             37..407
                     /locus_tag="CPT85_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_389039.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    196..201
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            435..779
                     /locus_tag="CPT85_03830"
     CDS             435..779
                     /locus_tag="CPT85_03830"
                     /inference="COORDINATES: protein motif:HMM:PF02049.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24354.1"
                     /translation="MIEKKFAPNINLFERMQPTKLDTGVGGISPFRMGRVEKLETNDF
                     KSVFSGLVENFNRELNAPDQLMKDVMEENGNADIHDVMTAMAKAELGVTVATNITTKV
                     IQAYEKITQIQL"
     gene            864..>1119
                     /locus_tag="CPT85_03835"
     CDS             864..>1119
                     /locus_tag="CPT85_03835"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24355.1"
                     /translation="MKINTNKTYKAIKEQFAQKKAKLKQEAQERIKEAQEYLEPKVKE
                     AAYQAKQKVQPKVDEFIASADSALNPPKAQVLKENVKKLEK"
     assembly_gap    1120..1168
                     /estimated_length=49
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1301..2239)
                     /locus_tag="CPT85_03840"
     CDS             complement(1301..2239)
                     /locus_tag="CPT85_03840"
                     /inference="COORDINATES: protein motif:HMM:PF04794.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24356.1"
                     /translation="MPPRYSTVQQSPAFSYPYKTFVLLFPQRKFYINGREKTXADDFG
                     ISNSANEAVFAAFKNGILTSTSIMANAPAFENAINLIPELKGISIGVHLNIIEFATLK
                     ENPKEKSLLYDKKGNYNNNYLALIQKSYNKDFLNEVEEDFRLQIETVMASTTVDHIDS
                     HVHVHAIPEIFKIVCKLAREYGIKNIRTQFEYPYFVPDVKKYLSVKYPLNLIKIALLN
                     TFTLINKKYLYANFNEINTNENFIGVNYTGYMDKNTLLXXVKQRTEAILHPSFDTNDS
                     LHYTEYQALINEEFKLAVKQAGIELINFSNEKKSIV"
     assembly_gap    1468..1470
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2125..2126
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2188..3147
                     /locus_tag="CPT85_03845"
     CDS             2188..3147
                     /locus_tag="CPT85_03845"
                     /inference="COORDINATES: protein motif:HMM:PF00535.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="DAB24357.1"
                     /translation="MDKKKLAIVVPCYNEEESLTVNIDVFKHTLFALIEKGVIKDDSF
                     ICFIDDGSKDKTWELIEKAHGVDFAHIKGLRFTKNYGNQKALIAGLEYALKKGVDCAV
                     TIDADLQQDETKIEEFINKFNEGSEIVYGIRKDRKSDNFIKKITGYAFYKFMNLMGAN
                     IVPNHSEYRLMSRKALDTLAQYKERNLFLRGIFCDTGLKSDYVEFDVKKRVHGDSKFS
                     FFSLFKLAAEGITSFSVRPLRLIFYIGVMISLISICWGCWTLYRLLNDLPARIGAIDY
                     YEIFEMFMSGLQMLCIGIIGEYVGQILQEVKGRPRSIIEKELD"
     gene            complement(3144..4487)
                     /locus_tag="CPT85_03850"
     CDS             complement(3144..4487)
                     /locus_tag="CPT85_03850"
                     /inference="COORDINATES: protein motif:HMM:PF09992.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24358.1"
                     /translation="MNTALAYNQKSIRKIVNHSLYFTVLLSLFCSQSLLVNNNLFANE
                     AIINNGANITQDKVEEQTRSLTEEKQRWESMLRQRYRNGAILTLADGVKHIRMVKYIN
                     SRPVKINIVEVNTKINPNIEIAPQLASTNLKHRATIRTIASRNNSIAAVNGTYFKPQN
                     GVPLGTLMIDKKVYTGPIHNRVAMGIGKNEFKMAQVQFNSTLKAGRQSLKIDNINQPR
                     MLSTYTLLYTRDWGLTSPTPPKYGVNIAIQDNKITAISYGSTAIPENGYVISGPKAKL
                     EPFFMAKKIELDIKMVPQWENIDHIISGGPYLIKDGEVFIDVTAQKLGAITGKNPRTA
                     IGYTAHNEFIMVTVDGREHASVGMTLGELARMMKGFGCINAMNLDGGGSTVMYVQGKV
                     VNNPAQKGGIPISNALTISERTRIAYXXMKIIRKFFKKINFTARDFFYSALIITY"
     assembly_gap    3230..3231
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    4738..4739
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4785..5369
                     /locus_tag="CPT85_03855"
     CDS             4785..5369
                     /locus_tag="CPT85_03855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003373915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
                     /protein_id="DAB24359.1"
                     /translation="MGLFGDNDDFSKFINKSLEGSQTEKNLKEAFCGESQARNKYSFF
                     AKQARKDGYVQIARIFEDTANNEAEHGKIWLKLLNGGKIPHTLDNLKSAASTENYEWE
                     DMYARFAQDAREEGFDKIACLFELVRGVEKMHMTRYNKLAHDIEEKAVFKRDEAVMWE
                     CAKCGYTFEGEEAPETCPFCRHPRAYFFEKCYNY"
     gene            complement(5380..7194)
                     /locus_tag="CPT85_03860"
     CDS             complement(5380..7194)
                     /locus_tag="CPT85_03860"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02518.24,HMM:PF13426.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24360.1"
                     /translation="MSTKSISISTQNKLILLGLVISTVLIVGLAVFAITNIQQKISEV
                     YAIFGEILTKTLAIESVEITKDVQEFDKFSTLQAHTRSIINSNNEIAFIEFKDADNKI
                     IYSSKNDYPNRAKQALITSSSQMIVNDNGVKTNIGKVTVGLSGGATKDISHATRNSML
                     VVFTVAWLVFTLVILINTILITRELSMLHHGVKKISTGQFGYTLDDKNTSGEIKDLIH
                     AFNDMSLRLHQYEEQNIDQLTLERNKFEAVLMSIVNGVVVCDNFDNVVLVNNAAKKML
                     EVEDEQILNTKIQMYCDTDGELCFKEKIEQFKDTPLDVMENKPLEFNIEVDNRVIKSV
                     ISPMFSKNQDYVGYVIVLIDVTKEVEIDKMKSNFISNVSHELRTPVTVLRTYIDTLYN
                     HSDDFDEKTNKEFFEVINKEAARLQKMVNDILDFSRLEAGNVKVVKEKTNIIPLIECE
                     IKSMQVLAEEKNITFSLIKEPNLPEIPINADSIERALNNLLSNAIKYSPENGRIKVRA
                     EIARDPQFVEVSVEDQGCGIPEEHQKKIFERFYRVENDTHTVKGTGLGLHLVKITIEK
                     HHQGQVFVKSKPNEGSTFGFRLPINPVEKAEDMEDETV"
     assembly_gap    7308..7309
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(7322..8599)
                     /locus_tag="CPT85_03865"
     CDS             complement(7322..8599)
                     /locus_tag="CPT85_03865"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24361.1"
                     /translation="MSDKMNVNNQVWTIRVPNNTSRIVNQNLWQYDMFGAYPNDSLAA
                     LNDTALFKFDNTASLFLDETARLSSFVGPLLKMLEAQNAQWAQIAAMNISKGNPSINI
                     VNKTTKPETDEKDSKDIDGTKEIKESQIKSTLERMGALDSRVGNKKIEYIDPKTGEKK
                     EIELLKRLIQLSKDYQENPDNPEKVEISDENYELLWDIAGRYAKSEGDLSRADYLKLI
                     EIAKNPGGPGAYRETKEEVSKAGLRPEKNQAVLDAALAGAPDNYESLATEFKEALYCW
                     GTDTDKLNNVKSKIDKNNVVEFSKYFHERYGEDYGENVLEAIFADCDSWGRGNHWYTD
                     DDPKPYVSKLSNSLIERTEDLIKNNPKMNDEDKKALQNACTTLADSIKDENIKYPWWS
                     TDMSSDCAKGISSNYQDLLDKLTKMEKSIYGED"
     gene            8826..10492
                     /locus_tag="CPT85_03870"
                     /pseudo
     CDS             8826..10492
                     /locus_tag="CPT85_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018028382.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diphosphate--fructose-6-phosphate
                     1-phosphotransferase"
     assembly_gap    10275..10279
                     /estimated_length=5
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            10651..>11110
                     /locus_tag="CPT85_03875"
     CDS             10651..>11110
                     /locus_tag="CPT85_03875"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24362.1"
                     /translation="MKINSIAATNYACKKPKMQSFNGSWEEKTIYKPDGYHSYHQKTY
                     LPDKGESTTEIAKAWEKETGLLPIDWVKDVNPYNQLGSKTNNGKYEKTEYVLNGQKYM
                     PVDVLIASAREKLNRKDEYDGYGKIKDCIELAQLHSLEGNQKAVKDVEKQI"
BASE COUNT         3398 a         1930 c         2099 g         3612 t
ORIGIN      
        1 gttcaaaaca atgtacaaaa taccactgca aacgttgtga accctacaaa aaaacagata
       61 ctagatatta tttcaaaagt gtctcaaaaa tacggcgtgg atgaaaaact tgtacaagct
      121 ctaatcagac aggagtcagg ttttaaccct aaagcccgct cacattgcgg agcaatgggc
      181 cttatgcagc ttatgnnnnn ntaaaagatg cctacaaccc tgtacagaac gttgaaggcg
      241 gtgtaaaaca tctcaaaggt ttgcttgcca gatacaacgg aaaccttgtg cttgcactgg
      301 ctgcatacaa tgccggaggc ggcaatgtag ataaatacgg cggtgttcct ccttttaaag
      361 aaacacaaaa ctatgtaaaa agcatactcg caaattacct gagctaacac ttaaaaacga
      421 aacggaattg aaatatgata gaaaaaaagt ttgcaccgaa cataaattta tttgaaagaa
      481 tgcagccgac aaagcttgac accggtgttg gcggaataag tccttttcgt atggggcgtg
      541 tagaaaaact cgagacaaac gattttaaat ccgttttttc aggccttgtt gaaaacttta
      601 acagagaatt aaatgcacct gaccagttga tgaaagatgt aatggaagaa aacggaaatg
      661 ccgatatcca cgatgttatg actgctatgg caaaagccga gctcggagtg acagtcgcta
      721 ctaatatcac aacaaaagtg atacaggcgt acgaaaaaat tacacaaatt cagctgtaac
      781 ctttatgtaa caaatttttg tataaaataa caaaaaaatt tctccttttg ctttataata
      841 agtgggcgca aggagaattt tttatgaaaa ttaatacaaa taaaacatac aaagcaataa
      901 aagagcaatt tgcacagaaa aaagcaaagc taaaacaaga agcacaggag agaattaaag
      961 aagctcaaga atatcttgag ccaaaagtaa aagaagctgc atatcaagcc aaacaaaaag
     1021 tgcagcctaa agttgatgag tttattgctt ctgctgattc tgccttgaac ccgccaaagg
     1081 ctcaagtgtt aaaagaaaac gttaaaaaac ttgagaaaan nnnnnnnnnn nnnnnnnnnn
     1141 nnnnnnnnnn nnnnnnnnnn nnnnnnnnac ccttatctgg gaaagagaaa aagagcttaa
     1201 aaaattggaa caaaatgtat tatcagctat agaaaaactc aaaaatttca cagaaaaaga
     1261 atctgctgca caaagggttt ttaatttaat gaacttataa ttatacaatg gatttttttt
     1321 catttgaaaa attaataagc tcaattccgg cctgcttcac agcaagtttg aattcttcat
     1381 taataagtgc ctgatattcc gtataatgaa ggctgtcatt agtatcaaat gacgggtgca
     1441 atattgcttc tgttctttgt ttcacatnnn ataaaagagt gtttttatcc atatagcctg
     1501 tgtaattaac acctataaaa ttttcgttgg tgttgatttc gttaaaattg gcatacaggt
     1561 attttttgtt tatgagcgta aacgtattta aaagagctat ttttatcaga ttgagagggt
     1621 atttgacaga aagatatttt tttacatctg gtacaaaata agggtattca aactgtgtgc
     1681 ggatattttt tatgccgtat tcccgcgcaa gcttgcatac aattttgaat atttctggaa
     1741 ttgcatgtac atggacatgc gagtctatat ggtcaaccgt agtacttgcc ataaccgttt
     1801 caatctgcag cctaaagtct tcttcgactt cgtttaaaaa atctttgtta tatgactttt
     1861 gtatcaacgc aagataattg ttgttgtagt tgcctttttt gtcgtataga agcgattttt
     1921 cttttggatt ttcttttaaa gtagcaaatt ctataatgtt tagatgtaca ccaatgctta
     1981 tgccttttaa ctcaggaatc aaattaatag cgttttcaaa agcaggtgca ttggccataa
     2041 tgcttgtgga agttaatatc ccatttttaa atgcagcaaa aacagcctcg tttgcgctgt
     2101 ttgaaatacc aaagtcatcg gcatnngttt tttctcttcc attaatataa aatttccttt
     2161 gaggaaataa taacacaaag gttttatatg gataagaaaa agctggcgat tgttgtaccg
     2221 tgctataacg aggaggaatc tcttactgtt aatatagatg tctttaagca tacgcttttt
     2281 gctttaattg aaaaaggcgt tattaaagat gatagtttta tctgttttat tgatgacgga
     2341 agcaaagata aaacatggga gttgatagaa aaggctcacg gcgttgattt tgctcatata
     2401 aaaggtttga gatttacaaa aaattatgga aaccaaaaag ctctgattgc gggtcttgaa
     2461 tatgctctaa aaaaaggcgt agattgtgca gttacaattg atgcggattt gcagcaggac
     2521 gaaactaaaa ttgaagaatt cattaataaa tttaacgaag gttctgaaat tgtatacggt
     2581 ataagaaaag acagaaaatc agataatttc atcaaaaaaa ttacaggcta tgccttctat
     2641 aaatttatga atcttatggg cgcaaatatt gtccctaatc attcagaata cagactcatg
     2701 agcagaaaag ctcttgatac tctggctcaa tacaaagaaa gaaatctgtt cttgagagga
     2761 atattctgtg atacaggtct taaaagcgat tatgttgaat ttgatgtaaa aaaacgtgtg
     2821 cacggagatt caaaattcag ttttttctca ttgtttaagc ttgcagcgga aggtataacg
     2881 tcttttagcg taagacccct tcgacttatc ttttatattg gcgtaatgat ttctttgata
     2941 agtatctgct gggggtgctg gactttgtat cgcctgctca atgacttgcc ggccagaatt
     3001 ggtgctatag actattatga aatatttgaa atgtttatgt caggtctgca aatgctttgt
     3061 ataggcataa tcggagagta tgtcggccaa attttgcagg aggttaaagg cagaccccgc
     3121 tcaattattg aaaaagagct ggattaatac gtaataatta aagctgagta gaaaaaatcc
     3181 cgcgcagtaa aatttatttt cttaaaaaat ttacgaatta ttttcatcan ntcataagca
     3241 attcttgtcc tttctgatat tgtcaaagca ttggatattg gtataccgcc tttttgtgcc
     3301 ggattgttta ctactttgcc ctgtacatac ataactgtgg aaccgcctcc gtccaggttc
     3361 attgcgttta tacaaccgaa acctttcatc attctggcta gttctccaag cgtcatacca
     3421 acagatgcgt gctctctacc gtcaactgtc accattataa attcgttatg tgcagtataa
     3481 ccaatagctg ttcttgggtt tttgcctgta attgcaccga gcttttgtgc agtgacatca
     3541 ataaagactt ctccgtcttt gataagataa gggccgccgc ttattatgtg gtctatgttc
     3601 tcccattgcg gaaccatttt tatatcgagt tcaatctttt tagccataaa aaacggctcc
     3661 aactttgcct tgggtcctga tataacgtat ccgttttcag gtatagctgt ggagccgtaa
     3721 gatattgcag tgattttgtt gtcttgtatg gctatattaa cgccgtattt tggtggggtc
     3781 ggggatgtaa gcccccagtc tcttgtatag agtaatgtgt atgtggaaag cattctgggc
     3841 tggttgatat tatctatttt gaggctttgt cttcctgctt ttaatgtgga attgaattgt
     3901 acctgcgcca ttttaaattc gtttttgcct atgcccatag ctactctgtt gtggataggc
     3961 cctgtgtaga cttttttgtc tatcatcaat gtgcctaaag gtacaccgtt ctggggctta
     4021 aaataagtgc cgtttactgc ggctatagaa ttattgcggc ttgcaattgt tctgattgtt
     4081 gccctgtgtt ttaaatttgt ggatgcgagt tgtggagcga tttcaatgtt aggatttatt
     4141 tttgtattaa cttcgactat gtttattttg acaggccttg agttgatata cttcaccata
     4201 cggatatgct taaccccgtc tgccagtgta aggattgccc cgttgcggta tcgctgcctg
     4261 agcatagatt cccatctttg tttttcttcc gttaaactcc tcgtttgctc ttcgacttta
     4321 tcttgtgtaa tatttgctcc gttattaata atcgcttcgt ttgcaaaaag attgttgtta
     4381 accagcaaag attgagaaca aaacagactc aacaatacag taaagtataa agaatgattg
     4441 actatctttc ttatactttt ttgattgtag gctaatgcag tgttcattgt gattaactct
     4501 ttttttatct tttctactac tattgtaaca tatattggaa tctactacaa ttgtaaaaga
     4561 gatttatttt taaaaaacca atcacattgc accttttcag cttaatattc cttaatcaaa
     4621 atcggcacaa aaaacaccct gaaatatagg ctatatttat ttatggtaag gtttacactt
     4681 aatctttttt tttataattt atgcatctaa actagccgtt ttggctaaca gaattatnnt
     4741 tctttgtgtt ctaatacttc ctgtagagtc agaaaggagt ttatatgggg ttatttggtg
     4801 acaacgatga tttttctaaa tttatcaaca agagtcttga aggttctcaa acagagaaaa
     4861 atttaaagga agctttttgc ggagaatctc aagcaagaaa taaatactct ttttttgcaa
     4921 aacaggcaag aaaagacggc tatgtgcaga tagcaaggat atttgaagat actgccaata
     4981 atgaagcaga acacggaaaa atttggctca aacttttaaa cggtggtaaa attcctcaca
     5041 cacttgataa tttaaaatca gctgcaagta ccgaaaacta tgaatgggaa gacatgtatg
     5101 cccgttttgc tcaagacgca agagaagagg gttttgacaa aatagcctgt ctttttgagc
     5161 ttgtacgcgg ggttgaaaaa atgcatatga ccagatacaa caagcttgcg catgacattg
     5221 aagaaaaagc tgtttttaaa agagatgaag ccgtaatgtg ggaatgcgca aaatgcggtt
     5281 atacttttga aggcgaagaa gctcctgaaa cctgtccgtt ttgcagacat ccgagagcat
     5341 acttttttga aaaatgttac aactactaaa atttaacgtt taaactgttt cgtcttccat
     5401 atcttccgct ttttcaacgg gattaatggg gagacggaac ccgaacgttg agccttcgtt
     5461 gggtttgctt tttacaaaaa cctgaccctg atggtgtttt tctatagtta ttttaacaag
     5521 gtgcaggcca agacctgtac cttttactgt atgtgtatca ttttccacac ggtaaaaacg
     5581 ctcaaatatt tttttctggt gttcttctgg aataccgcag ccctgatctt cgacagacac
     5641 ttccacaaac tgagggtcac gagcgatttc tgcacggact ttgattctgc cgttttccgg
     5701 agagtatttt attgcattgg aaagaagatt gtttaatgcc ctttcaatgc tgtctgcatt
     5761 gattggaatt tccggaagat tgggctcttt tatcaatgag aaggtaatat ttttttcttc
     5821 tgccagaact tgcatggatt ttatttcaca ttcaatgagt gggataatgt ttgttttttc
     5881 ttttacgact tttacattgc cagcctcgag tcttgagaag tctaaaatat cgttaaccat
     5941 tttttggagc cttgcagcct ctttgttaat aacttcaaaa aactctttgt ttgttttttc
     6001 gtcaaagtcg tcagagtgat tgtacaaagt atcaatatat gttcttaaaa cagtaacagg
     6061 tgttctgagc tcgtggctta cgttagagat gaagttgctt ttcatcttgt cgatttcaac
     6121 ttcttttgtt acatcaataa ggacaattac atagccgacg taatcctgat tttttgaaaa
     6181 catcggggag attactgact ttattaccct gttatccact tcaatattga attcaagcgg
     6241 cttgttttcc atcacatcaa gaggagtgtc tttaaactgt tcgatttttt ctttaaaaca
     6301 gagctctccg tcagtgtcgc agtacatctg gatttttgta ttcaagattt gctcgtcttc
     6361 aacttcaagc atttttttag cagcgttgtt aacaagtaca acgttgtcaa agttgtcgca
     6421 aacaacaacc ccgttaacaa tactcataag cacagcttca aacttgttgc gctcaagggt
     6481 aagctggtct atgttttgct cttcatattg gtgaagcctc aaggacatat cattaaaagc
     6541 gtgaataagg tcttttattt caccggaagt gtttttgtca tcaagagtgt aaccaaactg
     6601 gcctgtagaa atctttttta caccgtgatg gagcatactc aactctcttg tgataagaat
     6661 ggtgtttatg agtataacca gcgtaaatac aagccacgca acggtgaaca caaccagcat
     6721 tgagtttctt gttgcatgag aaatatcttt tgttgctcct ccggaaagcc ctaccgtaac
     6781 tttaccgatg tttgttttta ccccgttgtc attaactatc atctgagatg agctcgttat
     6841 aagcgcctgt tttgcgcggt tgggataatc atttttgctt gaataaataa tcttgttgtc
     6901 agcgtcttta aactctatga acgctatttc gttgttgctg ttaataatag aacgtgtgtg
     6961 agcctgaaga gtggagaatt tatcaaattc ctgaacatct tttgtgattt ctacactttc
     7021 aatggcaagt gtttttgtga gtatttcgcc gaatatagca taaacttcgg aaattttttg
     7081 ctggatattt gttatggcaa aaacagccaa acccacaatc agcacggtgc tgattaccag
     7141 acccagaagt attagtttat tttgtgtgct tatactgata gactttgtac tcattgtaga
     7201 aaaattatag cattaaatta aaaatagtaa tatacataaa aataaagggc acatattgtg
     7261 cccttgaaaa cctaccatac ctattataaa ccgaggaata aattgtannt tttattaatt
     7321 attagtcttc gccgtagatg gatttttcca tttttgtgag tttatcaagc aagtcttgat
     7381 agttgctgct gatacctttt gcgcaatcag atgacatatc agtgctccac caggggtatt
     7441 tgatgttttc atctttgata gaatcagcta atgtagtgca agcgttttga agagcttttt
     7501 tgtcttcgtc attcatttta ggattgtttt tgattaaatc ttctgttctt tcaatgagag
     7561 agttagacaa tttgctaacg tatggttttg gatcatcatc tgtgtaccag tggtttcctc
     7621 tgccccagga gtcacaatct gcaaatattg cttcaaggac attttcacca tagtcttcgc
     7681 cgtatctttc gtggaagtat ttagaaaatt ctactacatt gtttttgtca atttttgatt
     7741 ttacgttatt taatttatca gtatctgtac cccagcagta taaagcttct ttgaattcag
     7801 tagccaatga ttcatagttg tcaggtgctc cagctaaagc agcatccaat acagcctgat
     7861 tcttttcagg gcgaaggcct gcttttgaaa cttcttcttt tgtttctctg taagcaccag
     7921 ggccgccagg gtttttagct atttcaatca attttaagta atcagctctt gataaatcac
     7981 cttcagattt tgcatatctg cctgcaatat cccagagtaa ttcataattt tcatcgctga
     8041 tttctacttt ttcagggttg tcagggtttt cttgataatc ttttgataat tgaatcaaac
     8101 gtttgagaag ttcaatttct tttttctcac ctgttttagg gtcgatgtat tcaatttttt
     8161 tgttgccaac tcttgaatca agagcaccca tgcgttcgag tgttgatttt atttgagatt
     8221 ctttaatttc tttagttccg tcaatatctt ttgagtcttt ctcatctgtt tcaggttttg
     8281 ttgttttatt tacaatatta atgctagggt tgcctttaga tatattcatt gcagcgattt
     8341 gagcccattg tgcattttgt gcttcaagca tttttaaaag tggacctaca aatgaggaga
     8401 gtcttgctgt ttcatcaaga aataatgatg cagtattgtc aaacttaaac aatgctgtgt
     8461 catttaatgc agccagtgag tcattgggat atgcaccgaa catatcatat tgccagaggt
     8521 tttgattaac tattctggat gtattgttgg gtactctgat tgtccaaact tgattgttta
     8581 cattcatttt gtcactcata atcttatcct ctgtagttcc ttattcctct aataaactaa
     8641 gactttattc agtcctattg gattcctcgt tcctgtatta atataaaaaa tttttgagtc
     8701 aggaaattgc ctttttagtc aaaatcttgt taacaaaact taacaataat ccctgagccc
     8761 ttgataattg ttttcatgct agaatcttac atgtaattgt taaataaagt gaggttagta
     8821 aaattatgac agaattatca cctttgcaaa aagcaagact tggctttaaa cctgtacttc
     8881 ccgctacatt ggctgccgga atcaaaaaag tggcagttat tgaaggcgaa aaaacagagt
     8941 gcgttaaaga ccaggagcaa attaaaaaac tttttgccaa tacatacggc aaatgcactg
     9001 ttaccttcaa atctggcgaa gaacaaagct ttgcagcaag aaatatcggc gttatcctat
     9061 ccggtggtca ggctcccggc gggcacaatg ttgttgccgg tttgtatgat gctttgaaac
     9121 aggctaaccc ccagagcaaa ttatacggtt tcttaggcgg cccgtccggt attatcgacg
     9181 gtcaatatat agaatttact gatgaaatca tcgacgcata cagaaacaca ggcggttttg
     9241 atatcatcgg ttcaggcaga acaaagcttg aaacagaaga acagtttgaa aaatcacttg
     9301 caaactgcaa aaagcttgat atttcgggta ttgtaatcat cggcggtgac gactctaaca
     9361 ctaacgctgc aatgcttgca gaatggtttg ttgctaaaaa cgcaggtgtt caggttatcg
     9421 gctgtcccaa aacaattgac ggcgacttga aaaacgagca aatcgaaatc tcttttggtt
     9481 ttgatacagc tacaaaaaca tacgctgagc tggttggtaa tattcaaaga gacgtaaatt
     9541 cagctaaaaa atactggcac tttgtcaaag ttatgggcag aagtgctact cacgttgctc
     9601 ttgaagttgc tttgcaaact caacctaata ttactttgat ttcagaagaa gttgaagaaa
     9661 agaaaatgtc acttaaacaa attgttgact atatggctga catcattgca agacgtgcaa
     9721 atgcaggtaa aaacttcggt gttgcattga ttccagaagg tttaattgaa ttcattcctg
     9781 aaatgaaaac aatgattgca aacctcaatg atgtaatgtc tactcttgaa caggatgctt
     9841 cgtacaacaa gttgactgta cctgctgaca aattcaactt tattgaaagc agacttgaac
     9901 ctaataacgc aaaagttttt gaatctttgc ctgtattgat taaagcacaa ctgcttatgg
     9961 acagagaccc tcacggaaat gttcaggttt ccaagattga aacagaaaaa cttttgattg
    10021 aaatgattaa agttaaactg gatgaaatga aatctcaagg tgaatttgcc ggtaaattct
    10081 ctgaccagtg ccacttcttt ggatacgaag gcagatgtgc attcccatcc aactttgacg
    10141 ctaattactg ctatgcttta ggtttcaatg catatgctct tatgcagtca ggcatgacag
    10201 gttacctctc atctatcaga aacacaactg ctccatctac tgaatgggtt gcaggaggtg
    10261 ttcctcttac tatgnnnnnc gtcacggtca tatgaagcct gttatacaaa aggctcttgt
    10321 aagactcgac ggtcctgtat ttaaaaagct cgaggcaaat agagaaaact gggcgatgaa
    10381 tgacgaatac atcttccccg gctctattca atactggggt ccgagcgaag tttgtgatat
    10441 cacaactcaa acactcaaac tcgagagaga agctgcttta gcttctgtat agagctttta
    10501 atttcaattt aaacgggttt ctcaaaaaag aggaacccgt tttttaataa acatttgtaa
    10561 atcttattct taaaattcaa caaattattt tgtttttgta ttttaatcca attggttata
    10621 tgtgttaatt aaaaaagaga gaggttatta atgaaaatca attcaattgc agctacaaat
    10681 tatgcttgca aaaagcctaa aatgcagtct tttaacggta gctgggaaga aaaaacaatc
    10741 tataaaccgg atggatatca ctcttatcat caaaaaacat acttgccaga taaaggtgaa
    10801 tctacaacag aaattgcaaa agcctgggaa aaagaaacag gattgcttcc tattgattgg
    10861 gtaaaggatg taaatccata caatcagctt ggctcaaaaa caaacaacgg caaatatgaa
    10921 aagacagaat acgttcttaa tggacaaaaa tatatgccgg ttgacgtttt gattgcttct
    10981 gcgagagaaa aattaaaccg taaagatgaa tatgatggct atggcaaaat taaagattgc
    11041 atagaacttg ctcaacttca tagtctggaa ggtaatcaaa aggctgttaa agatgttgag
    11101 aaacaaatag
//
LOCUS       DABS01000100            6395 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_27234, whole genome shotgun sequence.
ACCESSION   DABS01000100 DABS01000000
VERSION     DABS01000100.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6395)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6395)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6395
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            204..1454
                     /locus_tag="CPT85_03880"
     CDS             204..1454
                     /locus_tag="CPT85_03880"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010936225.1"
                     /note="catalyzes the isomerization between
                     2-isopropylmalate and 3-isopropylmalate in leucine
                     biosynthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="DAB24344.1"
                     /translation="MGQTIAEKIISKHAGYDVKAGELCIAKVDVAAVQDGTGPLMVQE
                     FKKLGKSKPANPQRCILFIDHASPSPRKELSNTHMVLREFAKETGAVLSETGCGVCHQ
                     RLVESFVNPGEILVGADSHTCTSGALGAFATGMGSTDVAVAMALGKTWLKVPATFKVV
                     VEGEFQKGVYAKDLILHLIGLIGADGATYRALEFHGSTIKNMTMADRFTLANMAVEAG
                     AKAGLFVTDEKTKAYLKEKGREDKFVEITPDPDAVYERVIEIDASKLEPTVSCPHTVD
                     NTKLAKDLKDVKVNQVFVGTCTNGRIEDLRVVADILKGKQVNPDVRMIVVPASKDVYK
                     QAIEEGLITTLVDAGAQILGPGCGPCVGVHAGILGDGEVCLATQNRNFQGRMGNTKGF
                     IYLSSPAVAAYSAISGCITDPRGI"
     gene            1556..2665
                     /locus_tag="CPT85_03885"
     CDS             1556..2665
                     /locus_tag="CPT85_03885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005842750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase"
                     /protein_id="DAB24345.1"
                     /translation="MCRIGAIKSKKYLHPSKALELMRSQQKGHDNSGFAFVMQDLGGV
                     FENYKDLPILSMACTNEGMHIAEDILHSIGFVRVMQWAPDVHNDMEGLNIEPMPNYVF
                     EVFNYPHSYKYAPKEEKEALLLDTRLKLRKALEQADEGYVYSFWPDVLMLKEIGAPRD
                     IGTYFGLWKENKDFCAKIITAQCRQNTNYDIVRYAAHPFFLQGYTALANGENTFYEKN
                     KLFQKKLHKGYIGFESDSQCFLYTLHYVNKILKWPLKYFKHVITPLPYDEIQARKDSE
                     ILLRIKASLAHLEVNGPNSIIAVTPDGTLFTTCDSKKLRPVVVGKTDDTVIITSEVTG
                     VNELMPDRDISQDIYPNEREMVVVDNDLNIERWHQ"
     gene            2677..4311
                     /locus_tag="CPT85_03890"
     CDS             2677..4311
                     /locus_tag="CPT85_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011736029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase"
                     /protein_id="DAB24346.1"
                     /translation="MKTNDVAKNDLKWQIEYNPQRCTLCGKCCAACTFNAIEFKVERR
                     RRVKSTGALPKPSVTWEAEPVVKQIIRKNKNCVGCGMCQKVCPNEAIKPVYNEHNRVN
                     VIHRAENAESPKRGGRSNLHTEGRTLDKIKIGRISQMTDPSLDAMRHTFDILAPFGRV
                     LPPEKLPFTVDENGDLQMSDAAPNTRWIYPIIIGDMSIGALSTRMWEAVAMAVAYLNE
                     VVGLPVRMCSGEGGMPLKLLKSRYLKYMILQIASGHFGWDRIINAMPEMIEDPAGVLI
                     KIGQGAKPGDGGLLMAKKVVRHIQEIRGVPKSDLLSPPNHQGLYSIEESVQKMFLSMN
                     SAFKFRVPVAIKVAASVTSVSVYNNLLRDPYNIVGGFFLDGIAGGTGAAHEVSLDHTG
                     HPIVSRLRDCYLAAVHQGKQGQIPLWAAGGVGMNGTLAADAFKMICLGANGVFTGKLI
                     LQIAGCIGNDFGRCNACNTGLCPVGITTQNKTLVDRLDVDKVAQNIVNYFIATDTELK
                     KLLAPIGNSSLPVGRSDALVTVDKNVATRLDIQHVC"
     gene            4305..6395
                     /locus_tag="CPT85_03895"
                     /pseudo
     CDS             4305..6395
                     /locus_tag="CPT85_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013008828.1"
                     /note="frameshifted; too many ambiguous residues;
                     incomplete; missing stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S ferredoxin"
     assembly_gap    4459..4488
                     /estimated_length=30
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         2128 a         1179 c         1384 g         1674 t
ORIGIN      
        1 atcatggaga aaaggagtgg aagagaaagt ataaagagaa ttggctacat taatataatt
       61 cccgaaacat gatttacaaa acatatattt tatatatatt tacatatatt aacattgttg
      121 tgcaaatatt attactgtac aaacagtgct ttaatttgat atattaaatg tggtattgga
      181 gtttaacgaa aagagataat catatgggtc aaacaattgc agaaaagata atttccaaac
      241 acgccggcta tgacgtaaaa gcaggcgaac tgtgtattgc aaaagtagat gttgcagcag
      301 tacaagacgg cacaggccct ttgatggtac aggaatttaa aaaactgggc aaatcaaaac
      361 cggctaatcc gcaacgctgc atattgttta ttgaccacgc ttctccaagc ccgagaaaag
      421 aactctctaa tacacacatg gtgttaagag aatttgcaaa agaaaccggc gcagtgctct
      481 ctgaaacagg ctgcggcgta tgccaccagc gccttgtaga atcttttgta aatcccggcg
      541 aaatcctcgt cggagctgat tctcacacct gtacttccgg tgcattaggt gcatttgcta
      601 caggcatggg ctctacagat gttgctgttg caatggctct tggcaaaacc tggcttaaag
      661 tgcctgcaac ttttaaagtt gttgttgaag gagagtttca aaaaggcgtt tatgcaaaag
      721 atttaattct gcatttgata ggtcttatcg gagcagacgg tgcaacatac cgtgcccttg
      781 aatttcacgg ttctaccatt aaaaatatga caatggcaga cagatttact cttgccaata
      841 tggctgtaga agcaggtgct aaagcaggat tgtttgtaac tgacgaaaaa acaaaagcat
      901 atcttaaaga aaaaggcaga gaagacaagt ttgttgaaat aacacctgac cctgatgctg
      961 tatacgaaag ggtaatagaa atagatgctt caaagcttga acctactgta tcttgccccc
     1021 acactgttga caacacaaaa cttgcaaaag atttaaaaga cgttaaagta aatcaggttt
     1081 ttgtaggtac ctgtacaaac ggccgtattg aggatcttcg agttgttgcc gatattttga
     1141 aaggcaaaca ggttaatcct gatgtaagaa tgatagttgt gcccgcttca aaagatgttt
     1201 ataaacaggc aattgaagaa ggcttgataa caacacttgt agatgctgga gcacagattc
     1261 ttggcccggg ctgcggacct tgcgttggtg tacatgccgg cattttagga gacggtgaag
     1321 tttgtctggc aacccaaaac agaaattttc aaggcagaat gggcaacaca aaaggcttta
     1381 tctacctttc ttctcctgct gttgcggctt acagcgcaat ttccggctgt ataacagacc
     1441 ctcgcggtat ttagctcata taaagatttt attaaaattc acctcatttt attgacatga
     1501 aataaaaata aaaatatgct aaaaaagcca gacaaataag gtgaattttt ggaatatgtg
     1561 cagaataggt gcaattaaat caaagaagta tctacacccc tcaaaagccc ttgagcttat
     1621 gcgttctcag caaaaaggcc acgacaattc aggctttgcg tttgtaatgc aagatttagg
     1681 cggagtgttt gaaaattata aagacttgcc gattctttct atggcctgta caaatgaagg
     1741 tatgcacata gcagaagaca tccttcacag cataggattt gtacgcgtaa tgcaatgggc
     1801 acccgatgta cacaatgata tggaaggctt gaatattgag cctatgccca attatgtatt
     1861 cgaagtattt aactacccgc attcatacaa atatgctcct aaagaagaaa aagaagctct
     1921 tcttttagat acccgattaa aactaagaaa agcattggag caggcagatg aaggctatgt
     1981 atactccttc tggccggatg tgcttatgct caaagaaata ggtgccccca gagatatcgg
     2041 aacatacttt ggactttgga aagaaaacaa agatttttgt gcaaaaataa taactgcaca
     2101 gtgcaggcaa aatacaaact atgacattgt acgctatgca gcacatcctt tctttttgca
     2161 aggctacaca gcactggcta acggagaaaa tactttttat gaaaagaata aactttttca
     2221 aaaaaagctt cataaaggtt acataggatt tgaaagcgat tctcaatgct ttttgtacac
     2281 tctgcactat gtgaacaaaa ttcttaaatg gccgttaaaa tattttaaac acgtaatcac
     2341 acctctgcct tatgatgaga tacaggcaag aaaagattct gaaattctgc tgagaattaa
     2401 agcctcactt gctcacctag aggtaaacgg cccgaattct attattgcag taacaccgga
     2461 tggaacgctt tttacaacat gtgattcaaa aaagctgaga cctgttgtag tgggtaaaac
     2521 agatgatacg gttattatca catcggaagt tacaggcgta aatgaactta tgccggacag
     2581 agatatctca caggatatat atcctaacga aagagaaatg gttgttgtag ataacgacct
     2641 caatattgaa aggtggcacc aatagatacc cgtgtaataa aaacaaatga cgttgccaaa
     2701 aacgatttga aatggcagat tgaatataat ccgcaaagat gtacactgtg cggaaaatgc
     2761 tgtgcagcgt gcacattcaa tgcaatagaa tttaaagtcg aaagacgacg cagagtaaaa
     2821 agtacaggcg ccttgccaaa accttctgtt acgtgggaag cagagcctgt ggtaaaacag
     2881 attataagaa aaaacaaaaa ctgcgtaggc tgcggaatgt gccagaaggt ttgtccaaac
     2941 gaagcaatca aaccggtgta taacgagcat aacagagtaa atgttattca cagagctgaa
     3001 aatgcagaat cacccaaaag aggcggtcgt tcaaaccttc atacagaggg taggactctt
     3061 gataaaataa aaatcggccg tatctctcaa atgacagacc cctcgctgga tgcaatgcgc
     3121 catacttttg acatacttgc acctttcgga cgtgttttac ctccggaaaa attgccgttt
     3181 accgttgatg aaaacggtga tttacagatg agtgacgctg ctcccaatac acggtggatt
     3241 tacccgataa ttatagggga tatgtcaata ggtgcacttt ctacacgcat gtgggaagcc
     3301 gttgcaatgg cagttgctta cctcaatgaa gttgtaggtc tgcctgtcag aatgtgctca
     3361 ggcgaaggag gtatgccttt aaaactgtta aaatcaagat atctaaaata tatgatttta
     3421 cagattgcat caggacattt tggctgggac agaatcataa atgcaatgcc cgaaatgatt
     3481 gaagaccctg ccggagtctt aataaaaata ggtcagggtg caaaacccgg agacggaggc
     3541 cttttaatgg ccaaaaaagt tgtacgccat attcaggaaa tcagaggcgt gccaaaatct
     3601 gatttgctct cacctccaaa tcatcaggga ttatactcta ttgaagaaag tgttcaaaaa
     3661 atgttcttgt ccatgaactc tgctttcaaa ttcagagtgc ctgtggcaat taaagtagcg
     3721 gcttcagtta caagcgtaag tgtttacaac aaccttcttc gcgaccctta caatattgtt
     3781 gggggctttt tcctggacgg tattgccggc ggaacaggtg cagcgcatga ggtatcactt
     3841 gatcacaccg gacatcctat tgtgtcaagg ctccgtgatt gttatcttgc tgcggtgcat
     3901 cagggcaaac aaggtcaaat accgctttgg gcagccggag gtgttggtat gaacgggaca
     3961 cttgcagcag atgcatttaa aatgatttgt cttggtgcaa acggtgtgtt tacgggaaaa
     4021 cttatcttac agattgccgg ctgcataggc aatgactttg gcagatgcaa tgcctgcaac
     4081 acaggcctgt gccctgtcgg aatcacaaca caaaacaaaa cccttgtgga caggctcgat
     4141 gtggataaag tggctcaaaa tattgttaat tactttattg caacagatac agagctcaaa
     4201 aaacttctgg ctcctatcgg aaacagctca ctgcctgtcg gccgctcgga tgcactcgta
     4261 actgtagaca aaaatgttgc aacaagattg gatattcaac acgtatgtta aaaaaataca
     4321 ctatagacag tttaaaagac aataaaagac tttcgacaag agaacttttg caaatcatct
     4381 acgataaaat ggcagaaggc tatacctctt tcgaaattac agcctcaggc cagcacaaca
     4441 ttggcgggcc tttgtggann nnnnnnnnnn nnnnnnnnnn nnnnnnnncg gctcaatggg
     4501 tatgccagat acaaaaattg taattgaagg ctctgctcct gctgatgtag gctggttaaa
     4561 ctccggtgcg gaaatcatat taaaaggaga cggcggagac acaaccgcac actgcgctgc
     4621 aagcggaaaa atttacgtag ctggaagagt aggaacccgc tccggtgcat tgatgaaaca
     4681 tgaccccaaa tttcctgctc cggaattctg ggtgttaaaa aacacaggct ccttctcatt
     4741 tgaatttatg ggtggaggaa ccgcagtaat atgcggattg gactgcgaag ggtttgattc
     4801 cataataggt tctcgctctt gtgtgggaat ggttggcgga acaatctatg ttagaggcaa
     4861 tgttaacggc ctttcagatg atgtttacat tgtagatatt gatgataatg acaaagagtt
     4921 tttaacaaac ggattaaatg aatttttaac aaaaatagag agaactgatt tatttgatac
     4981 tctgactgat ttttcacagt ggagaaaaat cattgcaaaa acttttgaag aaagaaaagc
     5041 caaccatctt attccaatga aagatttcag gctaaataaa tggtttaaag aaaatgacgg
     5101 cggcattttt tcagatgtct atgaagatga ttttaaagtt tattctattg taaacaaagg
     5161 agaccatcgc ttgcgttatc ccagctggga caattacacg cagcctgcac cctgtgaaag
     5221 tcactgccct atcgggattc cgacacaaaa aagaattaac cttataaaaa atgacaagat
     5281 aaaagaagca ttagagatga tgcttgatta cacgccattt ccggcttgtg tatgcggcaa
     5341 actttgtcca aatctttgca tggaagaatg cagcagaggt tatgtggatg aacctatcaa
     5401 gtttgatgcc ctgggtatga tgagcagaga tgtaaaaata ccgcagtttg caacaacaaa
     5461 agacaaatca gttgccgtaa taggttccgg tgtggcaggt ttatccgctg catggatgtt
     5521 aaaaaagcag ggatatcggg ttactgtttt tgaagaagac aaagaaatag gcggcaaact
     5581 aagacaggtt attccttacg aaagattgtc aaaagactgt cttgatgcag aattggaaag
     5641 aatcaaagaa tccggcataa atttcagcgt taatacaaaa ataacaaagg aactgtttga
     5701 aaacatcaaa aacgaataca atgctgtgat agtcacctgt ggtgcacaca atcctgttgt
     5761 aattccgttt gaaggacatg aaaaacttat caaaggtctt gatttcttaa aaaatgtcaa
     5821 taatggaatt aaacaaaata taggagaaaa aatcgttgta atcggtgcgg gtaacgcagc
     5881 aatggatgta atcattgagg catacaactg cggtgcaaaa aaagttacag caatagacat
     5941 tcaaaaaccg gctgcttttg ataaagaaat tgctcattgt aaagccctgg gtgcagaaat
     6001 tttgtaccct tgttttacag aaaaagtgac agataaaggc gtgctgttaa aagatggcac
     6061 tttgcttgaa gcagacacgg taataatttc cataggcgac agacctaagc tcgattttgt
     6121 agagcctgat tggttgaatg aacgaggaat gctcaagctg aatgaattta aacaaacaat
     6181 agatgaaaag gtttttgcag ctggagatgt tataaaacag gggcttttca caaatgccat
     6241 tgcagacggc aacaatgcag ccaaaaacgt catcaatttg cttgaaggta aacctttaga
     6301 aacttttgaa aaagcaacaa tgcttgctcg cgataaggtt aaaacagaat actatcaagg
     6361 tctttctcca atgaaggtac aagaaattga tgcct
//
LOCUS       DABS01000101            5617 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13879, whole genome shotgun sequence.
ACCESSION   DABS01000101 DABS01000000
VERSION     DABS01000101.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5617)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5617)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5617
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            31..777
                     /locus_tag="CPT85_03900"
     CDS             31..777
                     /locus_tag="CPT85_03900"
                     /inference="COORDINATES: protein motif:HMM:PF01643.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24324.1"
                     /translation="MLFTKEYEIKYYEQNVNGDLKESALLNFLQDIATLSAESLGFGP
                     SFVFANNYAWVVLKYHIELFAPLRNLSSIVIKTEPRGIAKLYAYRDFELYTKDGQCIG
                     KAVSTWVLIDICTRKLLNTQKILADFMAPYQKRETDLVYEKIDSPDELMYQEVFDVRF
                     DDIDVNRHANNSNYIVWALETLPVDFRLKHSPKTIDIKYKKEIGLNARVLSEAQQILT
                     DGNVQTLHVIKDEQNAQDLTSLKIVWQYLI"
     gene            949..1449
                     /locus_tag="CPT85_03905"
     CDS             949..1449
                     /locus_tag="CPT85_03905"
                     /inference="COORDINATES: protein motif:HMM:PRK00039.2-1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="DAB24325.1"
                     /translation="MRILGIDPGIAIVGYSVIDAVDGVYTLVSSGSIQTDKNKSEAGR
                     LYEIATDLEEIIKAYKPDTAGVEKLYFFKNQKTIIPVAQARGVIMMTLEKYSISAVEY
                     TPIVVKQTITGYGRASKDEVARSVEQMVEKDGKNWPKLDDTVDSIAIAVCHARNEECN
                     LSQYAV"
     gene            1468..1944
                     /locus_tag="CPT85_03910"
     CDS             1468..1944
                     /locus_tag="CPT85_03910"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24326.1"
                     /translation="MEIKQLLLKQMGMLSSVLGLVLGVITIIPFICNFSFFALIVLSA
                     PIILVYMKKLDMIGILDIRQGAMYGAIIGFISFVAFSVSFVPLATIIGFIYKGSYYLG
                     VSLLFRTGFFVLIMMVFFVALLAALMNAFSGLVTIYVYNQLEQKPEESKTDINIEE"
     gene            1950..3017
                     /gene="mtnA"
                     /locus_tag="CPT85_03915"
     CDS             1950..3017
                     /gene="mtnA"
                     /locus_tag="CPT85_03915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015185955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="DAB24327.1"
                     /translation="MDFKSKIKTIEWINDKKVSRMVDQLVVPYEYKLVDISTSDDMFD
                     AIKTMIVRGAPAIGIAGAHGMALAALEIAEKTQDSEEFLKQLKEKAQYLKSARPTAVN
                     LMWAVDKQFDYIKDSHKSVNEMVQMLIDHGVKLENEDIEINKKIGDYGAQLVPKKSAT
                     ILTHCNAGALATVGYGTALGVVRSAFANDNTVQVFADETRPRQQGARITTFELAMDGI
                     PVTLITDGMSGYFMNKGMIDMVVVGADRIASNGDTANKIGTYNLAIVANYHNVPFYIA
                     APLSTIDTSISSGKQIPIEERDHKEVTHINGKSVCAEGVNVINPGFDVTPAELIKGII
                     TEKGVLYPPYSESIKKAFAEL"
     gene            complement(3208..3627)
                     /locus_tag="CPT85_03920"
     CDS             complement(3208..3627)
                     /locus_tag="CPT85_03920"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24328.1"
                     /translation="MSIVASVMKKLHTRKILKTAEKNMKKDGAYKIVKHINKKTGVVS
                     LIGKTKQGEKYNSFGLLADGSQISKSYAQLLINNTPCTNKIKTIRTVVVGADGHRYKK
                     EKTIKKFLELTRVPVKEMSKEIHMFKTGENFFMKKVS"
     gene            4185..5171
                     /locus_tag="CPT85_03925"
     CDS             4185..5171
                     /locus_tag="CPT85_03925"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24329.1"
                     /translation="MRLIVILFVLIIYLSNAPCTFAKDCVNIIYLHGFNAFDYPIVED
                     EAKRVAQAFQGRCMGNYCFSGKYRVIFWADLYDCDEAFKLYESALMSLNNTHNHTNPK
                     IHLSMDQQKFNLFSPLIHPSDRGSGPVSCYLRNLINGFLFQIFFLKTSPYHQNIVMDR
                     IQKAVDTTNNKFVIIAHSFGSAAAVDFLETRIISNPANEEKFAGLITSADLTTTFNAN
                     YWAQNKDYDPLKKIAQFIVQKDKFWICYNHRNDIAATGLPKKLTDYKKEHNLKGKGFI
                     VSKTTKSAFLNNYTSFLRPFALDNGKIRAHSWLHLRPYDFADKVIKTYEQEH"
     gene            complement(5176..5607)
                     /locus_tag="CPT85_03930"
     CDS             complement(5176..5607)
                     /locus_tag="CPT85_03930"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24330.1"
                     /translation="MLLLDSKKWEKAVEQKDDKSIVIEYGIKGEDVKNFKWTQLVTVQ
                     YFVITDNFKTTLDEYYKTHIGAIEAIAKNSEKPFEKKIIYQNKNEILYEWKFDNAKET
                     EIARVVYTPKGIYHIHFAKKGAFTNEEKAKYIDLLKTAQLK"
BASE COUNT         1736 a          951 c         1071 g         1859 t
ORIGIN      
        1 tcaaaataac cttatagtca ggagttttat atgctgttta caaaagaata cgaaattaag
       61 tattacgagc aaaatgtaaa cggggattta aaagagtctg ctcttttaaa ctttttgcag
      121 gatattgcca ctttgagcgc ggaatcactg gggtttggcc cgagttttgt ttttgccaac
      181 aactatgcat gggttgtgct caaataccac atagagcttt ttgctccgtt gaggaatctg
      241 tcttcaattg ttataaaaac tgaaccaaga ggtattgcaa aactttatgc ttaccgtgat
      301 tttgaattat atacaaaaga cggccaatgc attggcaaag cagtttctac atgggtgctg
      361 attgatattt gtacaagaaa gcttttaaat acacaaaaaa ttctggctga ttttatggca
      421 ccttatcaaa aaagagaaac tgatctcgtg tacgaaaaaa tagactctcc tgatgagctt
      481 atgtatcaag aggtttttga tgtcaggttt gatgatattg atgttaacag gcatgctaat
      541 aattcaaact atattgtctg ggcattggaa actcttcccg ttgatttcag gctaaaacat
      601 tcaccaaaga ccattgatat aaaatataaa aaagaaatcg ggcttaatgc aagagttttg
      661 tcagaagcac agcagattct aacggatggt aacgtacaaa ctttgcatgt aataaaagat
      721 gagcaaaatg cacaggattt gacttctctt aagattgtgt ggcaatatct aatctagtat
      781 cgtcattgtc gcctcgaatt ctcgagccgc cattgactca ccttttcaag gtgacactca
      841 caaaattcgt tcacgtcgtt gtcactcctt atcacgaatt ttgctcggac aaaatatttc
      901 aaaatactaa gagtttgtca tcgtgtttgt gtagtctata atggaagaat gagaatattg
      961 gggatagatc cgggaatagc aatcgtcggc tacagtgtaa tagatgctgt agacggtgtt
     1021 tatactcttg tgagctcagg ttctatccaa actgacaaaa acaagtctga agcaggcagg
     1081 ctgtatgaaa tagctacgga tctggaagag ataataaaag cttataaacc tgatacggca
     1141 ggtgttgaaa agctgtactt ttttaagaac caaaaaacaa ttataccggt ggctcaagcc
     1201 agaggtgtaa taatgatgac gcttgaaaag tattccataa gcgctgttga atacaccccg
     1261 attgtggtaa aacagactat tacgggttat ggcagagctt caaaagacga agttgcccgc
     1321 tcggttgaac aaatggtcga aaaagacggc aaaaactggc caaaactgga tgatacagta
     1381 gactctattg caattgccgt atgccatgcc cgaaacgaag aatgtaacct gtcacaatac
     1441 gctgtatagt aattttagag gtatattatg gaaataaaac aacttttgtt aaaacaaatg
     1501 ggaatgctct caagtgtcct tgggttggtg ctcggcgtta ttactatcat tccttttatc
     1561 tgcaattttt ctttctttgc attgatagta ctttctgctc ccataattct tgtttacatg
     1621 aaaaagctgg atatgatagg catacttgac atcaggcagg gcgctatgta cggtgcaatt
     1681 attggattta tttcttttgt tgctttttct gtgtcatttg tgccgctggc aactattatc
     1741 gggtttattt acaaaggttc ttactacctt ggtgtgagcc tgttgtttag aaccggtttc
     1801 tttgttttaa ttatgatggt gttctttgtg gcattgttag ctgctttaat gaacgcattt
     1861 tcaggtcttg ttacaatcta tgtttacaac cagcttgaac aaaaacctga agaatcaaag
     1921 acagacatta atatcgagga atagaaggaa tggattttaa atcaaaaatt aaaacaattg
     1981 aatggataaa cgacaaaaaa gtttccagaa tggtagacca gctggttgtt ccgtatgagt
     2041 ataaactggt tgatatttct acatcagatg acatgtttga tgcaatcaaa acaatgatag
     2101 taagaggtgc acccgccatt ggtattgccg gcgcacacgg tatggcgctg gcagctttag
     2161 agattgctga aaaaacacag gatagtgaag agtttttgaa acaactaaaa gaaaaagcgc
     2221 agtatttaaa aagcgcaaga cccactgctg ttaatcttat gtgggctgta gacaagcagt
     2281 ttgactatat taaagactcc cacaagtctg ttaacgaaat ggtgcagatg cttatcgacc
     2341 atggtgttaa actggaaaat gaagatattg aaatcaataa aaaaataggc gattacggtg
     2401 cgcagcttgt gcctaaaaaa agtgcaacaa tactcactca ctgcaatgcc ggtgcgctgg
     2461 caactgtggg ctacggtacg gctcttggtg ttgtgcgttc tgcatttgca aatgacaaca
     2521 cagtgcaggt ttttgcagat gaaacaagac cacgtcagca gggtgcaaga attaccacat
     2581 ttgaacttgc aatggacgga atccctgtta ctcttatcac tgacggtatg agcggatatt
     2641 ttatgaacaa aggtatgata gatatggttg ttgtcggtgc tgacagaatc gcttctaacg
     2701 gtgatactgc caacaaaatc ggtacataca atctggctat tgttgcaaat taccacaacg
     2761 tgccttttta tattgctgca cctttgtcca caattgatac atccatttca tcaggcaagc
     2821 aaatacctat tgaagaaaga gaccataaag aagttacgca catcaacggt aaaagtgttt
     2881 gcgctgaagg tgttaatgta atcaatccgg gctttgatgt aacaccggca gaattaataa
     2941 aaggtattat tacggaaaaa ggtgtgcttt atcctccgta cagtgagtct attaaaaaag
     3001 cgtttgctga attataatgc aaaaaaaagc cgtccattga ggccggctac tagacttggg
     3061 gaggaggttt gttagacctt ttgtctaaca atatatctat cggcacattg gattcaaaac
     3121 tttagaaata tcatctattt ggtttacaaa aattcataaa aaagcagcct gaattatttc
     3181 aggctgcttt ttatagtttg ctaaaaacta cgaaaccttt ttcataaaga agttttcacc
     3241 tgttttaaac atatgaattt ctttggacat ttctttaacc ggtactcgcg ttaactcgag
     3301 aaattttttg attgtttttt cttttttata tctgtgtccg tctgctccca caactactgt
     3361 tcttattgtc ttaattttgt ttgtgcatgg cgtgttgtta ataagcagtt gtgcatagct
     3421 ttttgaaatt tgtgaaccgt ctgccagtaa accaaaggaa ttgtattttt caccttgttt
     3481 tgttttgcct ataagcgaga caacgcctgt ttttttgtta atgtgtttta caatcttata
     3541 ggcaccgtct tttttcatat ttttttctgc agtttttaaa atttttcttg tgtgcaattt
     3601 tttcataact gatgcaacaa tagacatttt tacctctttc cgtaatgtga taaatcctct
     3661 ttttgtaatg aggggttaca attatataac gtagtttttt aattcacaag tagttttttg
     3721 tagggacaat tttttattgt taacgaatgt aacgaaaaat atctaaattg aaattatata
     3781 aattttaaat actttatata tgtgtaagtg ttgtaaacaa gaggtaaaca aagatggcat
     3841 tcactcctaa caatgcaata gatcaaaaac ttgcaaaaat gtatgccgaa aaggttacgg
     3901 ttaatctgga taaccgctca acccttgatc cggaagattt ctggaagacc atgcagatga
     3961 tagctgtcgc aaacaaagcg atgatgcata tcaattgtgc atagaaaaaa agttcaaatc
     4021 ccatataaca gggaccttat attggagatt tatggagttt tccctattag tctagttttg
     4081 cctgagtttc tctcaggttt tttttgctta tttttctggt tattcttctg tttatagcta
     4141 aaggtgcgtg gctgcaaatt accggttaat ttatctttgt atttatgaga ttaattgtta
     4201 tcttatttgt tttaataatt tacttaagca atgcaccttg tacttttgca aaggactgtg
     4261 taaatataat ctatcttcac ggtttcaacg cttttgacta tccgattgtt gaagacgaag
     4321 ccaaaagggt tgctcaggct tttcaaggac gctgtatggg caattactgt tttagcggaa
     4381 aatatagagt aattttctgg gcagatttgt atgactgtga tgaagcattc aaactctatg
     4441 aatcagcttt gatgtcttta aacaatactc acaatcacac aaacccaaaa atacatctga
     4501 gtatggatca acaaaagttt aatctttttt ctccgcttat tcatccttcg gacagaggct
     4561 cagggcctgt ttcctgttat ttgagaaatc ttattaacgg atttttgttc cagatttttt
     4621 tcttaaaaac ctctccttat catcagaata ttgtaatgga tagaatacaa aaagctgttg
     4681 atacaacaaa taataaattt gttattattg cacacagttt tggctctgct gcagctgttg
     4741 attttttgga aacaaggatt atatcaaacc cggctaacga agaaaaattt gcaggactaa
     4801 ttacatccgc tgatttaacc acaacattca atgccaatta ctgggcacag aataaagatt
     4861 atgaccctct aaaaaagatt gctcaattta ttgtgcaaaa agataaattc tggatttgtt
     4921 acaatcatcg aaacgatatt gcagcaacag ggctgcctaa aaaacttacg gattataaaa
     4981 aagaacacaa tttaaaaggt aagggcttta ttgtcagcaa gactacaaag tctgcttttt
     5041 tgaataatta tacgagtttt cttcgtccgt ttgcgttgga taacggaaaa ataagggctc
     5101 attcctggct gcatttacgt ccgtatgatt ttgccgacaa ggtgataaaa acttatgagc
     5161 aggagcatta aatatttact ttaattgtgc ggtttttaaa aggtctatgt atttagcctt
     5221 ttcttcattg gtaaaggctc ctttttttgc aaaatggata tgataaatac cttttggcgt
     5281 atatacaacc cttgctattt cagtttcttt ggcgttatca aacttccatt cgtaaagaat
     5341 ttcatttttg ttttgataaa taattttctt ttcaaacggt ttttcagaat ttttggctat
     5401 tgcttctatc gcaccaatat gggttttgta atattcatca agagttgttt taaaattgtc
     5461 tgttataaca aaatactgta ctgtaacaag ttgtgtccat ttaaaattct ttacatcttc
     5521 gcctttgatt ccgtattcaa tcacaatgga tttgtcatct ttttgctcta cagctttttc
     5581 ccatttttta gaatccaaaa gtaacataac ttcaccg
//
LOCUS       DABS01000102            4415 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_26290, whole genome shotgun sequence.
ACCESSION   DABS01000102 DABS01000000
VERSION     DABS01000102.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4415)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4415)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4415
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..785
                     /locus_tag="CPT85_03935"
     CDS             <1..785
                     /locus_tag="CPT85_03935"
                     /inference="COORDINATES: protein motif:HMM:PF01966.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24294.1"
                     /translation="YGTENAGLIMIEPFEGKKISDEFLKLINVTSRLFAISMMLLKLT
                     DETSKVMAEPDVSSSELQHYRAELTAVIGDLGAEQQNFVEMLAKAVDAKSEYHNNHSQ
                     HVADLAKEMCEYLGLNEKTKDLIYYAGLLQNIGKITIPEELFNKKEKLSKEDWETLQN
                     HPNIGVSLLMSINFLSEVIPYIHYHKERWDGKGEPEGLKGQSIPFGSRIIALADAYSA
                     LREERPYRQALSKEEALKIIKQEAAIKWDPDLVNVLESLLAK"
     gene            831..1598
                     /locus_tag="CPT85_03940"
     CDS             831..1598
                     /locus_tag="CPT85_03940"
                     /inference="COORDINATES: protein motif:HMM:PF01738.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24295.1"
                     /translation="MKKILILIIALLILAPTTALAAAKKQKVGYVGITYETKDSFVIK
                     SKLFYPAKQQSVYPVVVMLHSLGYSSDYWGNIPKKFIDEGAAVLMIDLRGHGQSMYDS
                     NFRIRSWQYFTKNTYEKYPSDISDIIKYVASNYKNLSTTKYAIVGADIGANTAILAAE
                     KLPNQPAAMVLISPTREFKWLYTPIALTNLHPFPILSMVSARDPYSNKESQALKKFAQ
                     GEFDIKIYPAGSMGMLMLKANPSMGTDIVNWVMPKIK"
     gene            1635..2789
                     /locus_tag="CPT85_03945"
     CDS             1635..2789
                     /locus_tag="CPT85_03945"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24296.1"
                     /translation="MRINNQMYNYKSAAPGNFKGYDARPLKAVVMTISDEPAAFEIVK
                     KISDIGKKDGFDVYYSNGCSKLLKNINSIKKKFNENLGFRFCKWAQDRAVLTPKNKVI
                     SDGYYKNSIFARSLSSVTKAKTVSSQDAIEGGNLFFIKSNGKNEMLLGSEDLVGRNIE
                     TIKKMYGVDKIHILPQADYHLDLFYRPLTDNKILIADDTMTLKALQKGLNNLKKYLKN
                     NDCIQEEQNKLLFVKDKLENLIKEFKIDINLNNNFNADDIEPLLKEKGFEPIRVPARI
                     YSTIPNYKRDDLTHSLNYINAVVHQKPDKSLTYITNKSDLNEKFGITWQIARKIGFDF
                     EEMFIKSLAPYVKRDDIHFVSGQNNHVSYLLEKEQGGVHCLCNEIPAGII"
     gene            2942..>4415
                     /locus_tag="CPT85_03950"
     CDS             2942..>4415
                     /locus_tag="CPT85_03950"
                     /inference="COORDINATES: protein motif:HMM:PF01514.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24297.1"
                     /translation="MDFQKILENKPLLYGLIGGLVVVLALFITVGIVVSSNNSGAPKT
                     VKEKVIDKPLDLLTTDNLGKAIEIQALLAREGITVERRADGQKSVLYLQKYTMTQRDR
                     ALLAIVKSGLVDQNIGLEIFDKGDFTSTKEDKRIRLTRAINGELSRLIRKIPPIENAS
                     VFVSIPEQVMFEQDQKPITATVQIVMPSGEKLDNMKVKAIRNLLLGSVNGLEAENISI
                     TDTNGNVYDSIASADDDMLAKLEENDQYMQAKVKTQLDKLIGKGNYAVTVSTYLRQAP
                     MQKDAIDFDPTKKTALTEQTFSEGLGDQTRDTNKGISAVSVYLPNGLPANNADSAQNR
                     SYSRTARESQYGVPKIQTSELIKPGTIEDISIAVTLEESSIPANMTLEELKVLVAKAA
                     SPKAKPENVEIAFSDSVDPFLAGDKPESLPKPDSTGNPWWLAIAMILIGLGFGLKFLS
                     DKVKKAQERQREEIEMLREKTQDQEKQIRDVNLKAAELIEK"
BASE COUNT         1609 a          828 c          839 g         1139 t
ORIGIN      
        1 attacggcac agaaaatgcc ggactgataa tgatagaacc gtttgagggc aagaaaattt
       61 ccgatgaatt tttaaaactc attaacgtaa catccagact ttttgcaata tctatgatgc
      121 tgctgaaatt aactgatgaa acatcaaaag taatggcaga accggatgtt tccagctctg
      181 aattgcagca ctatcgtgcg gaacttactg ccgtaatagg cgaccttggc gcagaacagc
      241 aaaattttgt agaaatgtta gcaaaagctg ttgatgcaaa aagtgaatat cacaacaatc
      301 actcacagca cgttgctgac cttgcaaaag aaatgtgcga gtaccttggc cttaacgaaa
      361 aaacaaaaga tttaatatat tatgcgggcc ttttgcaaaa tataggtaaa attacaatcc
      421 cggaagagct gttcaacaaa aaagaaaaac tctcaaaaga agactgggaa actcttcaga
      481 atcaccccaa tataggtgta agccttttaa tgagcataaa tttcctttca gaggttattc
      541 cttacattca ttaccacaaa gaacgctggg acggaaaagg cgaacccgaa ggactaaaag
      601 ggcaaagcat tccgtttggt tcacgtataa ttgctctggc tgatgcttac agtgcattaa
      661 gagaagaaag accctacaga caggccttga gtaaagaaga ggcgctcaaa atcataaaac
      721 aagaagctgc aatcaaatgg gatccggatc ttgttaatgt tctggaatct ctgctggcaa
      781 aataaaaaca aatattaaaa ccccataatc cattgagaag agaaattaaa atgaaaaaaa
      841 ttttaatact tataatagcg ttgctaattc ttgcaccgac aaccgctttg gctgcagcta
      901 aaaagcaaaa agtcggatat gtgggtatta cttatgaaac aaaagacagc tttgtaataa
      961 aatcaaaact cttttatccg gctaaacagc agtccgtata ccctgtggtg gtaatgcttc
     1021 attctctggg ttattccagt gattattggg gaaatatacc aaaaaaattc atagacgaag
     1081 gcgctgctgt tttgatgatt gacttgagag gccacggtca gagcatgtac gattcaaact
     1141 ttagaatacg ctcctggcag tattttacaa aaaataccta cgaaaaatat ccctctgaca
     1201 tatctgatat catcaaatat gttgcatcaa attataaaaa tctttccaca acaaaatatg
     1261 caattgtggg tgctgatata ggtgcaaata ctgcaatact tgcagcggaa aaacttccaa
     1321 atcaaccggc agcaatggtg ttgatttcac caacaagaga gtttaaatgg ctgtacacgc
     1381 ctattgcttt gacaaacttg caccctttcc ccattctgtc tatggtaagt gccagagacc
     1441 cttattccaa taaagaatca caggctctta aaaagtttgc ccagggcgaa tttgatataa
     1501 aaatttaccc ggcaggatca atgggaatgc tgatgctcaa agctaatccg tcaatgggta
     1561 cggatatagt aaattgggtt atgccaaaaa ttaaatagca actttttata tttacgggtt
     1621 tataaactgt tgttatgcgt ataaacaatc aaatgtataa ttataaatca gcagcccccg
     1681 gtaattttaa aggatacgat gcacgccctc tcaaggctgt tgtgatgaca atcagcgatg
     1741 aaccggctgc ttttgaaatt gttaaaaaaa tctctgatat aggaaaaaaa gacggatttg
     1801 atgtgtatta ttcaaacggg tgctcaaaac tgcttaaaaa catcaatagt atcaaaaaga
     1861 aatttaatga aaatttaggt tttcgttttt gcaaatgggc acaggatagg gccgtgctta
     1921 cccccaaaaa taaagtaata tcggacggtt attataaaaa tagcattttt gcgcgcagcc
     1981 tgtcttctgt aacaaaggca aaaacagtat cttcacaaga tgcaattgag ggcggcaatt
     2041 tgttttttat aaagagcaac ggaaaaaatg agatgctgct cgggtcagaa gaccttgtag
     2101 gcagaaacat tgaaactatt aaaaaaatgt acggtgtgga taaaatacat atccttcctc
     2161 aagcagacta ccatttggat cttttttaca gacctcttac tgataacaaa attttgattg
     2221 cagatgatac aatgaccctc aaagctctcc aaaaggggtt aaataactta aaaaaatact
     2281 taaaaaataa cgattgtata caagaagaac aaaacaagct cttatttgta aaagataaac
     2341 tcgaaaacct tataaaagaa tttaaaattg atataaactt gaataacaac tttaacgctg
     2401 acgatataga accattgcta aaggaaaaag gatttgaacc aataagagtt cctgcaagga
     2461 tttacagcac tatcccaaat tataaacgtg atgatttaac tcacagcctg aattatataa
     2521 acgctgttgt acaccaaaaa cctgataaat ctctcaccta tatcactaac aaatcggatt
     2581 tgaacgaaaa gtttggcatt acctggcaaa tagcaagaaa aataggtttt gattttgaag
     2641 aaatgtttat aaaaagcctt gctccgtatg ttaaacgaga cgatatccat tttgtatcag
     2701 gccaaaacaa tcacgtttca tatcttcttg aaaaagaaca agggggcgtt cactgtctgt
     2761 gcaatgaaat cccagccgga ataatataaa taacatgact ttttgaaaaa aatcattaat
     2821 atgatgtaga agattttcta ctccatatgt atgaaaattt ccctcaagac atacatcggc
     2881 agttaacttc taccgtaatt gatagtataa tcttaagtag cgaggcagga aaaaatttta
     2941 aatggatttt caaaagatac tcgaaaataa gccattactt tatgggctaa tagggggact
     3001 tgttgtcgta ctggcactgt ttataacagt gggtattgtc gtgtcttcaa acaattcggg
     3061 tgctccaaaa accgttaaag aaaaagttat agacaaacct cttgatctcc tcacaacaga
     3121 taatctgggc aaagccatag aaattcaggc tcttttagcc agagaaggca ttactgtaga
     3181 aagacgtgca gacggacaaa aatctgtatt gtatcttcaa aaatatacaa tgacacaaag
     3241 agacagagcg ctgcttgcta tagtaaaaag cggccttgtc gaccagaata taggtctcga
     3301 aatatttgat aaaggcgatt ttacttcaac aaaagaagac aaaagaatcc gcctcacccg
     3361 cgcaatcaac ggtgaattgt cccgcttaat cagaaaaatc ccgccgattg aaaacgcttc
     3421 agtttttgtt tctattcctg aacaggtaat gtttgaacag gatcaaaaac ccattacagc
     3481 aaccgttcaa attgtaatgc caagcgggga aaaactcgac aacatgaagg taaaggcaat
     3541 aagaaacctt cttttgggct ctgttaacgg gctggaagcc gaaaatattt ctatcacgga
     3601 tactaacggg aatgtgtacg actctatcgc ttctgctgat gacgatatgc tagccaagct
     3661 ggaagaaaat gaccagtata tgcaggcaaa agtaaaaaca caacttgata aattaatagg
     3721 taaaggaaat tatgcggtta ctgtcagcac atatttgaga caggcaccaa tgcaaaaaga
     3781 cgcaatagat tttgatccga ctaaaaaaac agcattgaca gaacaaacct tctccgaggg
     3841 gctcggcgac caaacaagag atacaaataa aggtatcagt gcagtaagcg tataccttcc
     3901 aaacggcttg ccggctaata atgcagactc tgcacaaaac agaagctact ccagaacagc
     3961 cagagagtct caatacggtg tgcctaaaat acaaacaagc gagttgatta aacccggaac
     4021 aattgaggat atctcaattg ccgtaactct tgaagaaagc tcaattcctg ctaacatgac
     4081 gcttgaagaa ctcaaggtgc ttgtagcaaa agctgcttct ccaaaagcaa aacctgaaaa
     4141 cgtagaaatt gcattctctg attcggttga cccgttcctt gcaggtgaca aacccgaatc
     4201 cttgccaaaa cctgattcta caggcaaccc gtggtggctt gctatagcaa tgattcttat
     4261 tggtcttggc tttggtttaa aattcctctc tgacaaagtg aaaaaagcac aggaacgcca
     4321 aagagaagaa atagaaatgc tgagagaaaa aactcaggat caggaaaaac aaataagaga
     4381 cgtaaacctg aaagcagctg aactgataga aaaac
//
LOCUS       DABS01000103            4487 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_17215, whole genome shotgun sequence.
ACCESSION   DABS01000103 DABS01000000
VERSION     DABS01000103.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4487)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4487)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4487
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(235..930)
                     /locus_tag="CPT85_03955"
     CDS             complement(235..930)
                     /locus_tag="CPT85_03955"
                     /inference="COORDINATES: protein motif:HMM:PF01553.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24264.1"
                     /translation="MERNYARRYANEFNLFRLIYQALWCIFIAIPLFWLFYRFEIKGR
                     ENIPKGKKFICAANHVSHLDPFLVSIAVKKPIAYMAKKELFEDNGLIFRLNIDWLGAF
                     AVNRQKLEVATIKTVKELYKTNWLLGIFPQGGIRRNHTIEKINKGFAVIAKAAKWDVL
                     PISITGCEKYNWIPFGAKVTVQIGKPISYELSQDELIEQWGQQVASMSHYKYIETESE
                     NSEVQDQQEFAEA"
     gene            complement(967..1605)
                     /locus_tag="CPT85_03960"
     CDS             complement(967..1605)
                     /locus_tag="CPT85_03960"
                     /inference="COORDINATES: protein motif:HMM:PF01553.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24265.1"
                     /translation="MSTFSKRDTKTYNEFRRFCLWFVCNFCFGSYIKLMYNYNVEGKE
                     NIPSDERFIVAANHISGRDPFLLPFALNLPIAFMAKEELFEKFFSRTLMDCCGAFAVR
                     RDKVEVSTIKTALNIKNTNWMLGLFPQGTRDSSQKVEKITKGFASFAKATKTGILPVG
                     IIGSDEKPKWPFCTKLTVKIGKMIPYSDDIDDMMRQWCSTISELTGKEYVLE"
     gene            complement(1675..2754)
                     /locus_tag="CPT85_03965"
     CDS             complement(1675..2754)
                     /locus_tag="CPT85_03965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012963998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="DAB24266.1"
                     /translation="MKQFSQTGHYEGLINRYREYLPVTDTTPVVTLNEGNTPLVKADN
                     LARKIGLDCEIYLKFEGANPTGSFKDRGMTMAVTKAKEAGAKAIICASTGNTSAAAAA
                     YGAKAGLKTYVLIPDGYIALGKLSQAMMYGAEIIAIKGNFDEALERVIEISEKYPVTL
                     VNSVNPYRIEGQKTGAFEICDALGDAPDYHFIPVGNAGNITAYFKGYEEYHKLGKTTH
                     IPKMMGFEAEGAAAIVKGERIMKPETIATAIRIGNPASWKQAENARDKSGGIINFVND
                     EEIIATYKLIASTEGILAEPASAASVAGVIKAQKLGLIESGKKIVCILTGNGLKDPDS
                     AIKYSGCEVKKTSSELNDILKAMQI"
     gene            complement(2760..4037)
                     /locus_tag="CPT85_03970"
     CDS             complement(2760..4037)
                     /locus_tag="CPT85_03970"
                     /inference="COORDINATES: protein motif:HMM:PRK06349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="DAB24267.1"
                     /translation="MDKNGKVKLGLIGLGTVGTGVVKVLKDYENIEITRIAVKNLNKK
                     RDIENLDQSILTDDPFSIVTAPDIDIVVEVIGGTQPAYELLKTAIKNKKHIVTANKEL
                     LAKHGEELFNLANENNVVILYEAAIAGGIPIIMPIKTTLAGNKIHTIEAILNGTTNYI
                     LTKMEKDGVSYEEVLKEAQKLGYAETDPTGDVEGFDSAYKITTLATITLNQRVDINKV
                     YREGITKISANDMKFAKELGYKIKLIALAKLTEDNKADVRVHPMLVPIKDCLAGINGV
                     TNSVVLEGFPIGRVMFAGPGAGMFPTASSVLGDILAITRSMGSKELLPLMKCHHSVSA
                     QQIDIKDTVNKYYISVTATNTPGVIGSIGEICGRHNISLASVLQKGIDKENTAEIVVI
                     TEGCKEQDINNAVEELKNNNSIVKINNLIRVME"
     gene            4244..>4487
                     /locus_tag="CPT85_03975"
     CDS             4244..>4487
                     /locus_tag="CPT85_03975"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24268.1"
                     /translation="MNGYSAIPASYQNGLYWQYFMKSFEDAMAMQQKKANAYQDSIMA
                     NQASGPLKATNQSYVNNADVEAANAAQAQAAMQTQSV"
BASE COUNT         1223 a          877 c          738 g         1649 t
ORIGIN      
        1 tattatatat aaaattacac tatgtttggc gtttcgtcaa taccttgcta tttttgtagt
       61 aaattgtaaa aacaaaaaaa tatgcatttt tttatgcata ttttaaaatt tttaccacac
      121 ttctctctaa tttttgatgc tttttttata aaaaataaaa aagattagtt tgattttttc
      181 atattggttg tcatgtgtac actttattgt tgttacattt ctttacattt gaatctatgc
      241 ttctgcaaat tcctgttggt cttgcacctc actgttttca gattctgttt ctatatattt
      301 gtaatggctc atagatgcaa cctgttgccc ccattgctca atcaattcgt cttgtgaaag
      361 ctcataagat attggttttc caatttgtac tgtcacttta gcaccaaatg gtatccagtt
      421 gtatttttca catcccgtga tagaaatagg caaaacatcc cattttgcag cttttgcaat
      481 tactgcaaaa cctttattta ttttttcaat ggtgtggttt cttcttattc cgccttgagg
      541 gaaaatgcct aataaccagt tagttttgta caattcttta acagttttta ttgttgcaac
      601 ttcaagcttt tgacggttaa cagcaaacgc tcccagccaa tcaatattca atctgaaaat
      661 taagccattg tcttcaaaaa gttctttttt tgccatgtaa gcaattggtt tttttactgc
      721 aatagaaacc aaaaacgggt caaggtgaga aacatgattt gcggcacaaa taaatttttt
      781 gcctttaggt atattttctc ttcctttaat ctcaaatctg taaaacagcc agaataatgg
      841 tattgcaata aaaatacacc atagcgcttg atatattaac ctaaaaagat taaattcatt
      901 cgcatatctt cttgcataat ttctttccat tcagtacctc cagacatcct tattccaaaa
      961 gaatatctat tctaaaacgt attcttttcc tgtcagttca gaaatagtgc tgcaccattg
     1021 acgcatcatg tcatcaatgt catcactgta gggaatcatt tttccgattt ttacagtaag
     1081 ttttgtacaa aacggccatt ttggcttttc atccgaaccg ataattccga cagggagtat
     1141 tcctgtcttt gttgctttgg caaatgaagc aaagcctttt gttatctttt ctactttttg
     1201 actcgaatcc cttgttcctt gagggaatag acccagcatc caatttgtat tttttatatt
     1261 taatgcagtt tttatagtag aaacttctac cttgtctctt ctgactgcaa aagctccgca
     1321 gcaatccatt aatgttcgtg agaaaaattt ttcaaaaagt tcttcttttg ccataaatgc
     1381 aatgggcaaa tttaatgcaa aaggcaacaa gaaagggtct ctacccgata tgtgattggc
     1441 tgcaactata aatctttcat cagatggaat attttcttta ccttcaacat tatagttgta
     1501 cattagtttt atgtaagagc caaaacaaaa attacaaaca aaccacagac aaaatctgcg
     1561 aaactcgttg taagtttttg tgtctctttt ggaaaaagta ctcatttagc gtatcctctg
     1621 attctttcta acatcttagc aaaaatagta tttaaaagcc aatcagacag ttgtttatat
     1681 ttgcattgct tttaaaatat catttaattc agaagatgtt tttttgactt cgcagccgga
     1741 gtatttgata gcagaatcag gatctttgag cccgtttcct gtaagtatac atacgatttt
     1801 tttgcctgat tcaataagtc cgagtttttg agcttttata acccctgcaa cagaagctgc
     1861 actggccggt tcagctaaaa taccttctgt tgaagcgatt aatttatatg tcgcaatgat
     1921 ttcttcatca ttaacaaaat taatgattcc gcctgatttg tctcttgcgt tttcagcctg
     1981 tttccagctg gccgggttgc ctattcttat ggctgtagca atagtttcag gtttcattat
     2041 tctttcacct ttcacaattg cagcggctcc ttctgcttca aatcccatca ttttagggat
     2101 atgagttgtt ttgccgagtt tgtggtattc ttcatatcct ttaaagtatg cagtaatgtt
     2161 gccggcattg ccgacaggga taaagtgata atccggggca tcgccaagtg catcgcatat
     2221 ttcaaatgcg ccggtttttt gtccctctat tctgtaagga ttcaccgaat ttacaagtgt
     2281 aacagggtat ttttcggata tttctattac tctttcaagt gcttcgtcaa agtttccttt
     2341 gattgcaata atttctgctc cgtacatcat tgcttgagaa agtttgccaa gtgcaatgta
     2401 accatcagga ataagcacat atgttttgag tccggctttt gccccataag cagccgctgc
     2461 agctgatgta ttacctgtag atgcacaaat tattgctttt gcgccggctt ctttggcttt
     2521 tgtaacagcc attgtcattc cgcggtcttt aaagcttcct gtagggtttg cgccttcaaa
     2581 tttaagataa atttcgcaat caagcccgat ttttcttgcc agattgtctg cttttaccaa
     2641 aggtgtattc ccttcattaa gagtaacaac aggcgttgta tccgttacgg gtaaatattc
     2701 tctgtatcta ttgattaatc cttcataatg acctgtttgt gaaaattgtt tcattttatt
     2761 tactccataa ctcttattaa attattaatt tttacaatgc tgttgttgtt tttgagctct
     2821 tcaaccgcat tattgatatc ttgttcttta catccttctg taataacaac aatctctgct
     2881 gtattttctt tgtcaattcc tttttgcaaa acactggcaa ggctaatatt atggcgtccg
     2941 caaatctcgc cgatggagcc tataacaccc ggtgtatttg ttgctgtgac tgaaatatag
     3001 tatttgttca cagtatcttt gatatcaatc tgctgtgcac tgacactgtg gtggcatttc
     3061 atcagcggaa gcagctcttt tgagcccata cttctggtaa ttgcaagaat atcacccaat
     3121 acagagcttg cagtggggaa cattccggct cctggtcctg caaacattac tctgcctata
     3181 ggaaaacctt ccagcactac actgtttgtt acaccgttta ttcctgcaag acaatctttt
     3241 ataggaacaa gcatcggatg cactctaaca tctgctttgt tgtcttctgt tagttttgca
     3301 agggcaatca atttgatttt gtatccaagc tcttttgcaa atttcatatc atttgcactg
     3361 atttttgtga taccttctct gtaaactttg ttaatatcaa ctctctgatt gagcgtgatg
     3421 gtagctagtg ttgttatttt ataagctgaa tcaaaccctt caacatcacc tgtggggtca
     3481 gtttctgcat aacccagctt ttgtgcttct ttcaaaacct cttcgtatga gacaccgtct
     3541 ttttccattt ttgtcaagat atagtttgtg gttccgttta aaatggcttc aattgtatga
     3601 attttattgc cggcaagtgt tgtttttatt ggcatgatga taggaattcc acctgcaatt
     3661 gccgcttcgt aaaggatgac cacattattt tcatttgcca gattgaataa ctcttcaccg
     3721 tgtttggcca gcagctcttt gtttgcagtt actatatgtt ttttgttttt tattgctgtt
     3781 tttaaaagct catatgccgg ctgggttccc ccaatgacct ccacaacaat atcaatgtca
     3841 ggggctgtaa caattgaaaa cgggtcgtct gttaaaatag attggtcgag gttttcaata
     3901 tctctttttt tgttcaggtt ttttactgca atacgcgtta tttctatatt ctcatagtct
     3961 ttcaacactt ttactacacc tgtgcctaca gtgcccaatc cgattaaacc taattttacc
     4021 ttaccgtttt tatccatatt tctcccgttt ccacatataa attattatcc ttattaaacc
     4081 ataaacaaag cagtgttttg cgtagtgact taaacatgct gcttaatatt acttaacact
     4141 ttttgtttta ttgtcaattt tagaattcta aaagttttta tttaaataag ggaaattaag
     4201 atttaatttt ttttagagga attttactaa acgaggggaa aatatgaacg gatattctgc
     4261 aatacctgca agctaccaaa acggtcttta ctggcagtat tttatgaaat cttttgaaga
     4321 tgcaatggca atgcagcaga aaaaagctaa tgcctaccag gatagcatta tggcaaacca
     4381 ggcttctggt cctttgaaag caacaaacca gtcctatgtt aacaatgccg atgttgaagc
     4441 agctaatgca gctcaagcac aggcagctat gcagactcaa tcagttt
//
LOCUS       DABS01000104            4485 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15871, whole genome shotgun sequence.
ACCESSION   DABS01000104 DABS01000000
VERSION     DABS01000104.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4485)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4485)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4485
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            1..1515
                     /locus_tag="CPT85_03980"
     CDS             1..1515
                     /locus_tag="CPT85_03980"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01966.20,HMM:PF13492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24236.1"
                     /translation="MLDDAKFLAENSQNKNAIKTNLFCWAYIYFSEKNYSQALTVLKQ
                     ARTIQSDNTIINIKVMDLIGRIDSLELDHSEITLDTDIEKPLVALLNVARTLAAETSL
                     ELLLKTVAQEIKKVLDADRCTVFLLDKNKNELVSKIALGMGTQELRFPADKGLAGYVA
                     QSGEIINIKDAYSDSRFNQEIDKETGYKTQTILCMPIWNMKHEILGVFQVLNKNNAVF
                     TKEDEEILIAIGSSAGIAIENARLFESQQLMINQQKELFKNFVDTLAASIDARDKITA
                     GHSNRVKMYSELICEVMDTDEKTKANIIHAAILHDIGKIGIRDAVLQKDGKLTDDEYK
                     HIQEHVKITYDILNRVYISEEFKEVAEIASSHHEKYDGTGYFRKLKGEEIHFGGRVLA
                     VSDVFDAITSKRHYRDKMPIKNALDIIKSGSWKHFDGNIVEAFFKIKLDRLVDVFLSE
                     VDSVLYNNEDREILSKFDVEYLYNLLDADEQNYSDSDRSLVELFNRYYNCKAGN"
     gene            1523..3112
                     /locus_tag="CPT85_03985"
     CDS             1523..3112
                     /locus_tag="CPT85_03985"
                     /inference="COORDINATES: protein
                     motif:HMM:PF13181.4,HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24237.1"
                     /translation="MIKKFITTAVILASSTACVCFAQGPDKNIIKTPVSTFNQENLKV
                     IKNNELTNDFLRIITFSQNSNTQNTATIDYSKKYADANEKFTQGNITSAYKDYKIVLA
                     GSQTEDFVNLGLAYKFANIGLFSLAQEAINNIQDRETYNHQIQLIKSKLFPQVVLSYD
                     DEILLAQNYTEIYYNNLAFEVARDMNKMPDRLKRSDYAHYILSQAYYNIKEYSKAINE
                     INKALSINPDNANYVKYKAQIFCETNKLSDAIKTLDNLLSQDINILDYRKDLEGLRYY
                     TLAKAAKDRAKSRYYLAHYFMQTGDSQRAIKELNQNISANKKDVDSMTLLADIYFKQN
                     KLADSMDMYERAYKIKKNNPQTLMGIANMYMFKKDYKNAVDFYVKAAKKDKNNTTALI
                     NASLCYKMLDMTDKSVEYANKVLAKENLSADIYYTASKIDEIKNIQYLKKAVSLDPMM
                     TDAWLDLTDIAIKNNRLELARTYLKPVKYVNSKDHRYYYLAGLIQKQQGNKEAAQSNF
                     KKSLEINPFFVEASKELSSQL"
     gene            3129..3803
                     /locus_tag="CPT85_03990"
     CDS             3129..3803
                     /locus_tag="CPT85_03990"
                     /inference="COORDINATES: protein motif:HMM:PF00072.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="DAB24238.1"
                     /translation="MAKYNILIVEDHALTRFGLKTAFESADCLAEIYEASKAQTGIDI
                     VEKENIDVVIMDLGLPDMNGIEAAKIIKQKHPEIKVIILSSHEQQEDVIKSVKAGASA
                     YCTKDVAPDKLISIVESVIKGAAWFDPKVAGYVLNAAVAYEKEDKNPPDTDAKQEKTA
                     DTNLTTREKQVLALIVEGFSNSDIAKKLDVSVNTTKAHVCNILQKLSVSDRTQAAIKA
                     IKDHII"
     gene            3896..>4485
                     /locus_tag="CPT85_03995"
     CDS             3896..>4485
                     /locus_tag="CPT85_03995"
                     /inference="COORDINATES: protein motif:HMM:PF00072.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24239.1"
                     /translation="MVAIAKILIIDDSPKYLADALPLYGYEVDVATDGMQGLKKLTSE
                     NSDYDMVLLDVMMPNMDGWETLKAIRVNKRLENIPVIMITALNEEQKEISGLKFGADD
                     YVVKPFILPNLLARIEALLRRSTWQKEKVSNVDLKFVQEGEIEPLTAREKEILKMVSQ
                     GASNNDIAQKLFVREVTVKTHLNSIFKKLKVKNRTQA"
BASE COUNT         1758 a          800 c          788 g         1139 t
ORIGIN      
        1 atgctcgatg atgcaaaatt tcttgcagaa aactctcaaa acaaaaacgc catcaagaca
       61 aatctttttt gctgggcata tatttatttt tcggaaaaaa attattctca ggcactaact
      121 gtactaaaac aagcacgcac aatacaaagt gacaacacta ttataaatat caaagttatg
      181 gatttaatcg gaagaatcga ttccttggaa ttagaccaca gcgaaataac tttggataca
      241 gatattgaaa agccgcttgt tgcattgctc aacgtagcaa gaacacttgc agcagaaaca
      301 agccttgaac tgcttttaaa aactgttgca caagaaataa aaaaagtgct cgatgcagat
      361 agatgcactg tttttctact tgataaaaat aaaaatgagc ttgtatcaaa aattgcactg
      421 ggtatgggca cacaggaact acgttttccg gcagataaag gcttggccgg ttatgttgct
      481 caatcaggcg aaataataaa tatcaaagat gcctacagcg actcaagatt caatcaggaa
      541 attgacaaag aaacaggata caaaacacag acaatacttt gtatgcctat atggaacatg
      601 aaacacgaaa tattgggtgt atttcaggtt ctaaacaaaa acaacgctgt ttttacaaaa
      661 gaagacgaag aaattcttat tgcaataggc tcaagtgccg gtattgcaat tgaaaacgca
      721 agactatttg agtcacaaca gctgatgatt aatcagcaaa aagaactttt caaaaacttt
      781 gtagacacgc ttgcagcttc tattgatgca agagataaaa tcacagccgg ccactcaaac
      841 cgtgtaaaaa tgtattcaga attaatttgc gaagtaatgg acaccgatga aaaaacaaag
      901 gctaacatta tacacgctgc cattttacac gatataggca aaataggcat acgtgatgcg
      961 gtgctgcaaa aagacggtaa gttaacagac gacgagtaca aacatatcca agaacacgtg
     1021 aaaataacat atgacatact caaccgtgta tatatttcag aagagtttaa agaagtagcg
     1081 gaaattgcct caagccacca tgaaaaatac gacgggacag gatatttcag aaaattaaaa
     1141 ggcgaagaaa tccactttgg cggcagagtg ctggctgtta gtgatgtatt tgacgctatt
     1201 acatcaaaaa gacattaccg tgacaaaatg cccatcaaaa atgccctgga tattatcaaa
     1261 tcaggttcct ggaaacattt tgacggtaat attgtggaag catttttcaa aatcaaactc
     1321 gataggcttg ttgatgtatt cttaagcgag gtagactctg ttttatacaa caacgaagac
     1381 agagaaatat tatcaaagtt tgatgtagaa tatctttaca acctgcttga tgcagatgaa
     1441 caaaactatt cagattccga caggtctctg gtagaattat ttaacagata ctataattgt
     1501 aaggcaggta attaattatt ttatgattaa aaaatttata acaacagcag taattttagc
     1561 aagctctaca gcctgtgttt gttttgcaca aggccctgat aaaaatataa taaaaacacc
     1621 tgtttccacg tttaatcagg aaaatcttaa agtcataaaa aacaacgaac ttacaaatga
     1681 ttttttaaga ataatcacat tctcgcaaaa cagtaacaca caaaacaccg cgactattga
     1741 ttattctaaa aaatatgctg atgcaaacga aaaatttacg cagggtaata taacatccgc
     1801 atacaaagac tacaaaattg tgctggccgg ctcacaaaca gaagactttg ttaaccttgg
     1861 ccttgcatac aaatttgcaa acataggcct gttctcactt gcacaggaag caattaataa
     1921 tatacaagac agagaaacat acaaccatca gatacagctg ataaaatcca aactcttccc
     1981 acaggtagta ctttcttacg atgacgaaat actccttgca caaaattata cagaaattta
     2041 ctacaacaat ctggcgtttg aagttgcacg tgatatgaac aaaatgccag acaggctcaa
     2101 acgctctgat tacgctcatt atatactttc acaggcttat tacaacataa aagaatactc
     2161 gaaagccatt aatgaaataa acaaagctct gtcaataaac cctgacaatg caaattatgt
     2221 aaaatataaa gctcaaattt tttgcgaaac aaacaaactg tctgacgcaa tcaaaaccct
     2281 ggacaacctt ttgagtcagg atattaacat tctggattac agaaaagatc ttgagggttt
     2341 aaggtattac acactggcaa aagctgcaaa agaccgtgca aaatccagat attatctggc
     2401 tcattatttt atgcaaacag gtgactctca aagagctata aaagaactca atcagaatat
     2461 ttccgcaaac aaaaaagatg tcgattcaat gacactgctt gcagatattt atttcaaaca
     2521 aaataaactt gcagactcaa tggacatgta tgaaagagcc tataaaatca aaaaaaataa
     2581 tccacaaaca cttatgggca ttgccaatat gtatatgttc aaaaaagatt acaaaaatgc
     2641 agttgatttt tatgtaaaag cagcaaaaaa agacaaaaac aatacaactg ctctaatcaa
     2701 tgcttcttta tgctacaaaa tgcttgatat gacagacaaa tctgttgaat atgcaaacaa
     2761 agtgcttgca aaagaaaatc ttagtgcaga tatttattat actgcctcaa aaattgacga
     2821 aataaaaaac atacaatatt tgaaaaaagc tgtgtctctt gacccgatga tgacagacgc
     2881 ctggctggac cttacagata ttgccatcaa aaataaccgt ttggaactcg caaggacata
     2941 tctcaagccc gtaaaatacg ttaacagcaa agaccacaga tattactatc tggcaggtct
     3001 tatacaaaaa caacagggaa acaaagaggc tgcacagagt aattttaaaa aatcgttaga
     3061 aataaaccct ttctttgttg aagcgtcaaa agaattgagc tcacagttat aaagaaataa
     3121 aggcaataat ggcaaaatac aatatcctta tagtagaaga ccatgctctt acaaggtttg
     3181 gcttaaaaac agcttttgaa tcagcagact gcctggctga aatatatgaa gcgtctaaag
     3241 cacaaaccgg tatagatatt gtagaaaaag aaaacattga tgttgtaata atggatctgg
     3301 ggctgcctga tatgaacggt attgaagcag ctaaaatcat taaacaaaaa catccggaaa
     3361 taaaagtaat tatactttcc tcacacgaac agcaagaaga tgtgataaaa tccgtaaaag
     3421 ccggtgcttc tgcctattgc acaaaagatg ttgcccctga caaactaatc agcattgtag
     3481 aatctgttat taaaggtgca gcgtggtttg atcccaaagt agcaggttat gtgctcaatg
     3541 cagctgttgc ttatgaaaaa gaagacaaaa acccgcctga tactgatgca aaacaagaaa
     3601 aaaccgcaga cacaaacctg actaccagag aaaaacaggt gctggctctg attgtagaag
     3661 gattttccaa cagcgatata gcaaaaaagc ttgacgtaag tgttaacacg acaaaagcac
     3721 atgtctgcaa tattttgcaa aaactgtctg ttagtgacag aacacaggca gcaataaaag
     3781 ccatcaaaga ccatattata taatctaaat agatgaattt cgagcgcttt taattgataa
     3841 ataataactt atcaattaaa attacaacta aagtataaga agaaagaata aaaaaatggt
     3901 tgctatagct aaaatcttaa ttatagatga tagtcccaaa taccttgcag atgcattgcc
     3961 tttgtacgga tatgaggttg atgttgctac agacggtatg caggggctga aaaagcttac
     4021 atcagaaaac agcgactatg atatggtgct gcttgatgta atgatgccaa atatggacgg
     4081 ctgggaaaca ttgaaagcaa taagagtaaa taaaaggctt gaaaatatcc cggtaattat
     4141 gattaccgca cttaacgaag aacaaaaaga aatctcagga ctcaaattcg gtgcggatga
     4201 ttatgttgtg aaacccttta ttcttcctaa cttactggca agaattgaag cacttttaag
     4261 acgttctacc tggcaaaaag aaaaagtcag caatgtggat ttaaaatttg tgcaagaagg
     4321 tgaaatagaa cctcttacgg caagagaaaa agaaatctta aaaatggttt ctcaaggagc
     4381 aagcaacaat gatattgcac aaaaactctt tgtaagagaa gttaccgtaa aaacgcacct
     4441 taacagcatt ttcaaaaaac tcaaagtaaa aaacagaaca caggc
//
LOCUS       DABS01000105            7573 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_24723, whole genome shotgun sequence.
ACCESSION   DABS01000105 DABS01000000
VERSION     DABS01000105.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7573)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7573)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7573
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(45..269)
                     /locus_tag="CPT85_04000"
     CDS             complement(45..269)
                     /locus_tag="CPT85_04000"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24218.1"
                     /translation="MNKPKRIKISKIENKILSLSCKISRIESLSKILFECLVDKYDIS
                     TRDTESLCNVLCEEIKRANNKISKIESLFF"
     gene            352..588
                     /locus_tag="CPT85_04005"
     CDS             352..588
                     /locus_tag="CPT85_04005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013433275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="DAB24219.1"
                     /translation="MNNKKGELTSKFGKKLKMERTKKDYSQEKLSSLSNISKNSISAI
                     ERGESIPSIETIEKLANALNMPVTELIDVSRVDL"
     gene            652..1791
                     /locus_tag="CPT85_04010"
     CDS             652..1791
                     /locus_tag="CPT85_04010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007087746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="DAB24220.1"
                     /translation="MKISILGSTGSIGRQAIEVIQKMPGFFEVVSLTGGANLDVLRSQ
                     IKLVNPKNVCVKSEQDALALKKEFPKINVLHGDEGLVEIASDKTNERILVSVSGKTGL
                     KPTLAAIENKIDVALANKETLVMAGDIVMKRAKEKNVKILPVDSEHGAIHQCLSNRDE
                     VEKLIITASGGPFRNKTIDDIKNATVEETLHHPRWNMGKKITIDSATLMNKGLEVIEA
                     HHLFNMPYEKIQVVVHPQSIVHSAVEYVDGSVIAQLGFPSMHIPIQYTLTYPHRFEGI
                     ETRSFDFVKAGRLDFDAPDLEKFPCLKLAFEAGKQGGTLPVVMNAANEEAVYLFLDKK
                     ISLCQIYEITKKMMDSHENILNPSLEQILETDMIIRDFVKKSTAN"
     gene            1932..2621
                     /locus_tag="CPT85_04015"
     CDS             1932..2621
                     /locus_tag="CPT85_04015"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="DAB24221.1"
                     /translation="MPDYLTKEEIRQWRSSLERITLEEYAKRLGKVISDEKETNDMVD
                     MVYKHSAPVRYVSNDESSVVKNNFKAERISSLAQQSFEREKEISVEKMERDLRKTLNK
                     NKQAEKAAIAKAKEAKELKEVKKAEVKPAVKSIPAPKAQVKEVKPVVSQEETEDIQIT
                     FKKNLTPREQAVFEHFLNNKNSIVYAKELAQVLDLPRDYVYKYIKNLRAKMNENAIQN
                     ADNGGFVLTVK"
     gene            3115..3932
                     /locus_tag="CPT85_04020"
                     /pseudo
     CDS             3115..3932
                     /locus_tag="CPT85_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012616311.1"
                     /note="Catalyzes a key regulatory step in fatty acid
                     biosynthesis; frameshifted; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-[acyl-carrier-protein] reductase FabI"
     assembly_gap    3389..3390
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4030..5388
                     /gene="pyk"
                     /locus_tag="CPT85_04025"
                     /pseudo
     CDS             4030..5388
                     /gene="pyk"
                     /locus_tag="CPT85_04025"
                     /inference="COORDINATES: protein motif:HMM:PRK05826.1"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
     assembly_gap    5352..5359
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5982..6218)
                     /locus_tag="CPT85_04030"
     CDS             complement(5982..6218)
                     /locus_tag="CPT85_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24222.1"
                     /translation="MPLYNGINPSKRPPPPPPPPVLSSELWPPPPPPPPPISRTSYKS
                     VFSGEKMLNRQKFVLQEFLCKKSRFHRRLRRQLQ"
     gene            6229..>7573
                     /locus_tag="CPT85_04035"
     CDS             6229..>7573
                     /locus_tag="CPT85_04035"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24223.1"
                     /translation="MTVGSGGTTRGGEYHGGLSNSVSHPRADDGGSSYLTRSRGGDSK
                     TYIEVAGGQGGDSVGCSKWKCRGGDAGYGRGVVSANYYSSLEVNGNTVSAFSGHVTGS
                     NGQWGDYYKRYNPYGRGAKNYYTDTADNVTTYGDSGDPGACRSCIWAKNGVNGYGVIS
                     KTWKKFGMGGTSAIPQTYFVPSLEGKLVVTIPDAAGPEEKGGTTVAKNVKNNVVGRIF
                     YGYGAAGGKADESLEAPSAGEHSQFSLKGGGAPAPECTPRSYIPGGYAPVTVAVKKCT
                     KVVCNIVEANEDKIKEENVMSTGVEVLPQGFVKVGSKYALKQSVDDNKPEDITPFVVS
                     TSTPSSQSLSDYFQSIKLYEYIKGRYTTIMNTLIRWIKISGCFPEYNEGDEDKTEFAG
                     YDNKDTVYNTYRCFRDSNIKYEKICAEDVVETKETQGWHAGMIQPAICKENASPGT"
BASE COUNT         2497 a         1344 c         1555 g         2167 t
ORIGIN      
        1 tagaaatatt atattataaa taaactgatt ggagtgagat aaggttaaaa aaagagtgat
       61 tctattttgg agattttgtt gtttgctctt ttgatttctt cgcagagcac gttgcataga
      121 gattctgtgt cacgggtgga gatgtcgtat ttatccacaa ggcattcaaa gagaatcttt
      181 gagaggcttt ctattcttga gattttgcag ctcagggata ggattttgtt ttcaattttt
      241 gagattttta ttctttttgg tttgttcata aatttctcca agtaaacttg tattattgac
      301 aagtatactt aattgaaata aagctgtcaa tagactagta tagtatgtat tatgaataat
      361 aaaaaaggtg aattgacaag taaatttgga aaaaaattga aaatggagag aacaaaaaaa
      421 gattactctc aagaaaaatt gtcttcacta tcaaatataa gcaaaaactc tataagcgca
      481 attgaaagag gagaaagcat accctctatt gaaacaattg aaaaacttgc caatgctctt
      541 aatatgcctg ttacagaact cattgatgtc agcagggtcg atttgtaaaa aacaaattcc
      601 ccatatttat cctataatta atttcagagg aatatttaat cagggatagt tatgaagatt
      661 tcgattttag gttcaacggg ttctattggc agacaggcta ttgaagttat tcaaaaaatg
      721 ccgggttttt ttgaggttgt ttcgcttaca ggcggtgcaa atcttgatgt gcttcgctcg
      781 caaataaaac tcgtcaaccc aaaaaatgtc tgcgtaaaat ccgagcagga cgctcttgct
      841 cttaaaaaag agttccctaa aatcaatgtt ttgcacggtg atgaggggct tgttgaaata
      901 gcgtctgaca aaacaaacga aagaatcctt gtctccgttt cgggcaaaac aggcctgaaa
      961 cccacgcttg cagctattga aaacaaaatt gacgttgcgc ttgctaacaa ggaaaccctt
     1021 gttatggcag gtgatattgt gatgaaacgt gcaaaagaaa aaaacgtaaa aattctgccc
     1081 gttgattccg aacacggtgc aatccatcag tgtctctcaa acagagatga ggtggaaaag
     1141 cttattataa cagcatcagg cggtcctttt agaaacaaaa ccattgatga tatcaaaaac
     1201 gcaacagtgg aagaaacact gcaccatccc agatggaaca tgggcaaaaa aattacaatt
     1261 gactctgcaa cgcttatgaa caaagggctc gaggtcattg aggcacatca tttattcaat
     1321 atgccgtatg aaaaaattca ggttgtggtg cacccgcaaa gcattgtgca cagtgctgtc
     1381 gagtatgttg atggaagtgt aattgcacag ctcggatttc cttcaatgca tattcctatc
     1441 cagtacacgc ttacttatcc gcaccgtttt gagggtattg aaacacgcag ttttgatttt
     1501 gttaaggcag gccgtttgga ttttgatgcg cctgatttag aaaaatttcc ctgtcttaag
     1561 ctggcttttg aagccggtaa acagggcgga acgcttcccg ttgttatgaa tgcagctaac
     1621 gaggaggctg tttatctgtt tttggacaaa aagatttcgc tgtgccagat ttatgaaatt
     1681 accaaaaaaa tgatggattc tcacgaaaat attttgaacc cgtctttgga acaaattctt
     1741 gaaacagaca tgattataag agattttgta aaaaaatcaa cagcaaatta aataaattta
     1801 cattgtaaaa attgatacat attttgagat ttttattaaa gtttcatgct aaattatact
     1861 taacctaacc ccattggtaa aatatttgaa gagaaattag acagttatat tagtcaagga
     1921 gatttattaa tatgcccgat tatttgacca aagaagaaat cagacagtgg agaagttctt
     1981 tggagagaat cactttagag gagtatgcta aaagattagg caaagttatt tctgacgaaa
     2041 aagaaacaaa cgatatggtt gatatggtct ataaacattc tgctcctgta agatatgtat
     2101 caaacgacga atcttccgtt gtaaaaaata attttaaagc agagagaatc agctctttag
     2161 cgcagcagtc ttttgaaaga gaaaaagaaa tttctgttga aaaaatggaa agagatttaa
     2221 gaaaaactct caacaaaaat aaacaggctg aaaaagctgc aattgcaaaa gcaaaagaag
     2281 ctaaagaatt aaaagaagtg aaaaaagcag aggtaaaacc tgctgtgaaa tctatacctg
     2341 caccaaaagc acaggttaaa gaagtaaaac ccgttgtttc acaagaagaa actgaagata
     2401 ttcaaattac ttttaaaaag aaccttaccc cgcgcgagca agctgtgttt gagcactttt
     2461 taaacaacaa aaacagcatt gtttacgcaa aagagctggc acaggtgctt gatttgccta
     2521 gagactatgt atacaaatac atcaaaaacc tcagagcaaa aatgaacgaa aacgcaatcc
     2581 aaaatgctga caacggcgga tttgttctca cggtaaaata aaagctggaa aaatcatata
     2641 aaaaaagagg tcttatttaa gacctctttt ttgctgcaaa aaacaaacta ctcaaaagca
     2701 agcatatcgt gtcccggcac tctttccaga gtgttgtttc cttttaacgg agtggacaat
     2761 ctttctgcta cgctttttct gaatgattgt ttttctttgt tcatatcttc aacattagat
     2821 agaatttttc tgaaaacatt ttttcctaac atgttaccca tagcgtacct ctttctgcca
     2881 aatctcttta aaagattctt taaggcgtta agtaaataaa ataaacacaa ataaataata
     2941 aatgacctaa tatatataat acctcttttt ttgagttttg ccaatacatt tgtagtagta
     3001 aatccaaaat tgttacaaaa acactttttt aaatcggtta aattaataaa taaatatgga
     3061 cattcgctca tgttgatact aatatacagg tattatataa aggagaatgt ttttatgaaa
     3121 ttaatggaag gcaaaaaagg tattattttc ggcgtttcta acgcaagagg cattgcttat
     3181 gcgattgcca aacaaatcca cgaagcaggc ggcgaaatag ctttcacata cgctaacgaa
     3241 gctatggaat cacgcgttcg tcctctggct gaagaaatga atgcaaaaat gatagcagaa
     3301 tgtgatgtaa ccaacgaaga acaggttaaa gcagtttttg ccgaatatga aaaaacttac
     3361 ggaaaattgg attttgttat ccatgcccnn tagcttttgc tcaaaaagaa gatttgatgg
     3421 gtgattttat cgatacatca aaagcaggct gggatacagc tcttggtgtt agtgcttatt
     3481 ctttggttac tttggcaaga aatgcaaaac ctttattcaa cgaaggcggc gctatccttg
     3541 ctttgacata ccttggctcg gaaaaagttg ttgctaacta caatgttatg ggtgttgcta
     3601 aagcagcgct tgaatcttct gccagatatc ttgctgacaa cctcggcaaa atgggtgtta
     3661 gagttaactg cctttctgca ggtgctgtta aaacacttgc tgctaaaggt atttccggat
     3721 ttgacagaat gctcaaagca gcgattttaa aatcaccttt aaaaagaaat gtatctcttg
     3781 aagatgttgg caaaacaggt ttgtacctcg tttctgacct ttcttcaggt gttaccggtg
     3841 aaattgtaca cgtagattgc ggatgtcacg ctgtttatgc atcaattgac gaaatggatg
     3901 ctacatacgc atatcaaaag gaacaacatt aagaatattc aaagggcaat ctcaaagact
     3961 gcccttttag ttttttatgg tattgaatac actagattag atggcgaaac aatataagga
     4021 atcaaaaaaa tgatgaaaaa gaacaaaaca aaaatcgttg ctacgcttgg gcctgcaagc
     4081 tgtgaagaag caactataga agaacttgtg ctctccggag ctacaatgtt tagaatcaac
     4141 acttctcaca acacagcaga agctcacgct gaaactatta aaagaattag aaacgtagaa
     4201 aaaaaattaa aaacatttat tccagttctg gttgaccttc aaggtccaaa aatcagagta
     4261 ggtaatctta tcgaacctat tgcaatcgaa cccggcaaag agcttgtgct cgaatacgga
     4321 cttgaacaaa cagaccctaa catcgtacct gtagactaca aaggcgttgc tgacgatgtt
     4381 cacgaaggcg aatatatcct tctcgatgac ggtaaaatta aaattcaggt tgttgcaaaa
     4441 gaaggttcaa aagtacgtgt taaagttatt aacggcgaat tgctcaaacc cagaaaaggt
     4501 atcaacatcc ccggcggtac aaagagcctt tctgctatta cagaacgtga cgttgacttt
     4561 attaaatttg ctgtagacaa cgatgcagat taccttgctt tgtcttttgt cagagacaaa
     4621 gacgatatct tgctcgctaa aaaatatttg agtcactttg gtgctgatat acctatcgtt
     4681 gcaaaaatcg aaaaacctga agctgttaaa aacatcaaat ctattttgaa tgttgttgac
     4741 gctgtaatgg ttgctcgtgg tgaccttggt atcgagcttg ctccggaaaa agtgcctatg
     4801 gttcaaaaaa tgattgtaga cgaagcgttt gcacaaagaa aaacttgtat cgtagcaaca
     4861 caaatgctcg agtctatgat tgaaaacccg attccgacaa gggcagaagc ttctgacgtt
     4921 gctaacgcta tcttggacgg tgctgatgct gttatgttgt caggagaaac tgctgcaggt
     4981 aaataccctg tagaagctgt taaaatgatg gctatgattg ctcatgacgt tgaacaaagc
     5041 aacttcgtaa gctacaactt agacctccct atgaatcctg actatgaacc aactcctcaa
     5101 gctgttgcgg ctgctgccgt taaaatggct aacgatttgg gtgcaaaagc gattcttgct
     5161 ttcactcata caggttacac agttaaactg ctctcaaaat tgagaccatc tgttcctgtt
     5221 cttgctatct ctgacagcga aaaatcttgc agaaaattaa atctgttctg ggatatgcac
     5281 ccttacctca aagattggga tgttgtttta aatgatgatt tattgaaaaa aatcgataaa
     5341 ctcttactcg annnnnnnna gagttatcat tattggttct attcctaaac tcatcacagg
     5401 cagaacaaac tttgtacgtg ttcacagaat gtgcgcattc tagaaaacat ttttgtataa
     5461 ttcaaaaagc agacttttat ttaaggtctg ctttttttta ttaaaaaatg taaaacggaa
     5521 aatacaaaat ataaagaaat gttaagacaa gctcttgatc tcaaaatcca gttcccataa
     5581 ccttttctgt aaggtaaggt aagtgaccct ggattgtgtt tttagggatg aataattttt
     5641 tatatagctt tatcatgaag aaacatatgc tatataagga gttatgatga aaaagatttg
     5701 ccgaaacttt tgccctgctt tttcactggc agaagctttg attactttgt taattatttg
     5761 tattattgtg ctggcttctg tacccgtgat aacaaaaaaa agaagggaca tgacagaagg
     5821 ccccaaggga atgtggattt gtacaagaaa cagccagggg cagtacgttt attacgacaa
     5881 tcgctcaccc aaaggtgaca ttaacaatat cgacagttgg acagcaacag gcactgattc
     5941 ttgcacgttt acctccggtt cacgacctta caaatatggt atcactgtaa ttggcggcgg
     6001 aggcggcggt ggaaacggct cttcttacag agaaattctt gcaagacaaa cttctgccgg
     6061 ttcaacatct tttcacctga aaaaaccgat ttatatgatg ttctgcttat cggaggcgga
     6121 ggcggcggtg gaggcggcca gagctctgat gacaacacag gcggaggcgg tggaggcggc
     6181 ggccgctttg aaggatttat tccattatac agaggcactg cctatacaat gactgtagga
     6241 agcggcggta caacgcgcgg tggtgaatat cacggcggtt tgagcaactc tgttagccat
     6301 ccaagggctg acgatggagg ctcttcttat cttactcgtt cacgcggcgg tgactccaaa
     6361 acttatatag aagttgcagg cggacaaggc ggcgactctg taggttgttc caaatggaaa
     6421 tgtcgcggtg gagatgccgg ctatggtaga ggagttgttt ctgcaaacta ttattcatct
     6481 ttagaagtga acggaaacac tgtttctgct ttcagtggac atgtcacggg cagtaacgga
     6541 caatggggcg actattacaa acgctacaac ccctacggcc gcggtgcaaa aaattattac
     6601 acagacactg ccgacaacgt tacaacctat ggcgacagtg gagacccggg tgcttgccgt
     6661 tcgtgtatat gggccaaaaa cggtgtgaac ggctatggtg ttatctctaa aacttggaaa
     6721 aaatttggca tgggtggtac ttctgccatt ccccaaacgt attttgttcc ttctttagaa
     6781 ggcaaacttg ttgttactat tcctgatgcg gccggtccgg aagaaaaagg cggcacaact
     6841 gttgctaaaa atgtcaaaaa caatgttgtg ggccgaatat tctacggtta tggtgcagca
     6901 ggcggcaaag ctgacgaatc cttggaggct ccttctgccg gtgaacattc acaattttct
     6961 ttaaaaggag gaggggctcc tgcgcctgaa tgtactccaa gatcctatat ccccggcgga
     7021 tatgctcctg ttacggttgc ggtcaaaaaa tgtacaaagg tggtatgcaa tattgtagag
     7081 gctaatgaag ataaaattaa agaagaaaac gttatgtcta caggtgttga agtattgcct
     7141 cagggttttg taaaagttgg ctcaaaatat gctctcaaac agtctgttga tgacaacaaa
     7201 ccggaagata ttacgccttt tgttgtatca acaagcactc cttccagcca atctttgtct
     7261 gattattttc aatctataaa attatatgaa tatataaaag gccgctatac cacgattatg
     7321 aataccctta taagatggat aaaaatttcc ggatgttttc cggaatataa tgaaggtgat
     7381 gaagataaaa ctgagtttgc cggttatgat aacaaagata cggtttacaa cacttatcgt
     7441 tgttttagag attctaatat aaaatatgaa aaaatttgtg cagaagatgt tgtagaaacc
     7501 aaagaaactc aaggttggca cgctggtatg atacagcctg caatctgtaa agaaaacgct
     7561 tcgccgggta cat
//
LOCUS       DABS01000106           17554 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_4067, whole genome shotgun sequence.
ACCESSION   DABS01000106 DABS01000000
VERSION     DABS01000106.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 17554)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 17554)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17554
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     assembly_gap    148..176
                     /estimated_length=29
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<177..1292)
                     /locus_tag="CPT85_04040"
     CDS             complement(<177..1292)
                     /locus_tag="CPT85_04040"
                     /inference="COORDINATES: protein motif:HMM:PF03572.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S41"
                     /protein_id="DAB24182.1"
                     /translation="MKINLKKYGLTAFALLVIFVASAITTSGGVFASSPQQLYDQVWK
                     LINSKYVDHTNNQQDWKRWKNKYDKVINTDEDAYVAIQTMLASLNDPYTKFLDPKEFE
                     DETSSIKGSLKGIGVQIGLREGKLVIIAPIEDTPGEKAGLLAEDEILEIDGKSTKGIT
                     IDKAADQIRGEEGTYVTLLIKRKNQENKLYKIQRAEIEIKSVSTKTPEKAQLDDCVGY
                     IRLSSFISKNATTEFENALNQYKNKKGFIIDLRSNPGGLLSNAILISDMFLDGGIIVS
                     TVDRDGYKETTRATKRYVTDKPIVILINKGSASASEIFSGAMKDNKRALLVGENTFGK
                     GLVQEVNKLMGGSGANITIQKYLTPNGTDINKKGIAPD"
     assembly_gap    2044..2068
                     /estimated_length=25
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<2069..3865)
                     /gene="recJ"
                     /locus_tag="CPT85_04045"
     CDS             complement(<2069..3865)
                     /gene="recJ"
                     /locus_tag="CPT85_04045"
                     /inference="COORDINATES: protein motif:HMM:TIGR00644"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="DAB24183.1"
                     /translation="MILEKVWKIKEHKDIPQEIINVAGSGLLAQLLVQRGIDSVQKIT
                     DFLNPSQMKITSPFVFCDMQKSVDRIFDAIEKQEKIIIYGDFDCDGVTSTSLLYKTLT
                     HLGANVDYYIPNRENENHGLNTKALVKLIAKQRAKLIITVDCGVSDVEQVAFANGFKV
                     DVIITDHHEAPAVLPEAYAIINPKAVNALDKDLNVEQINALNELAGVGVAFKLACALL
                     ETKKDYDFANNLLPFVAVGTIADVVPILYENRSFVYAGLKLIESGIHYGLTKLLESGG
                     YEIKNGVTSENIAFGVAPRINAAGRLDTVEPAVKLLISDNKSEIDLCVEELNNFNRIR
                     QDICEDIFNEAVEMIQNEPPQDAIVLYKQGWHIGIIGIVASKLVEKFYKPVFLMTLDE
                     NTGFVRCSSRSIPEVHIRNVIADNESLFEYFGGHSQAAGLVFDPKKSPFEKVKSALIE
                     STKQQAEGKELVPRVNIDLELDGTDIGVELIDTIKQLEPFGEGNKTPVFAVKNLVLSS
                     FKTMGQKNNHLKIFCESSDGRPFECVYWNHDSLNIPQGKEFDVVFYPKLNVFNGITTI
                     QLDVQDVKSEFVVKDEKSDFKLYDHRKKTNIFR"
     gene            complement(3862..4245)
                     /locus_tag="CPT85_04050"
     CDS             complement(3862..4245)
                     /locus_tag="CPT85_04050"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24184.1"
                     /translation="MKEEYSENYRRWYDKDPILSKSMSTLEKSDDETQIKVALNLIKI
                     IIEHNISEHTFTSVEDMMTSVEEGLVEKGKSRWYDLDTTVRTAINMLENSPVPVQKAV
                     AKEMAKMVVDKIKEDKDEQDDDEEV"
     gene            complement(4266..4541)
                     /locus_tag="CPT85_04055"
     CDS             complement(4266..4541)
                     /locus_tag="CPT85_04055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018132258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S ferredoxin"
                     /protein_id="DAB24185.1"
                     /translation="MDKKIEDKLYTLKYKTDSKCHLEPEQSKCLQCLDKTCTIICPAN
                     VYSYSETDKKLTVSYEKCLECGACRIACKNIKWTYPKSGKGVIYKKS"
     gene            complement(4541..5854)
                     /locus_tag="CPT85_04060"
     CDS             complement(4541..5854)
                     /locus_tag="CPT85_04060"
                     /inference="COORDINATES: protein motif:HMM:PF01134.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="DAB24186.1"
                     /translation="MSEEIIQNKVDIIVVGAGPAGVSAAITAARGGKKVVLVERAPYA
                     GAKNMYGGVIYSHAASEIFPNYKEAPIERYISKHNYVLLSDEDSTEISYKNPSHEECA
                     FVAIRAKWDKWCVQEAVKEGVYFAPDTLVKELIVKDGKVVGITTDVEDFYADVVIIAD
                     GVNSLLARQIGLREDIKPKNVALAVKEVIRLAPEVIEKRFSLKEGTGCAMELVGGPLA
                     QMFGMGIVYTNKDSVAVGIGVSLEDLKTRKVKPYELLDAVKKHPFVAEIIEGGELLEY
                     SAHLIPEGGYKAVPKLYTDGAMVAGDAAGLVNNVHFEGTNLAMISGKLAAQTALEAFE
                     RGDFSSNTLCLYKKKLENSFILKDLKTYKDVVHTLSGRAGSFLTYYPAKVNEFFSIFT
                     CADGVPKXKKGNFQKFTKEFFTKRSLSELFKDAIAGIKIVFGILK"
     assembly_gap    4656..4657
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6000..6263
                     /locus_tag="CPT85_04065"
     CDS             6000..6263
                     /locus_tag="CPT85_04065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005959736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin"
                     /protein_id="DAB24187.1"
                     /translation="MNKAIVYTSATCPYCVKAKRLLQMLNIEFEEINCDENFDEMCAN
                     LSQKYNQPCISTVPQIIINDNYVGGYDDLEHLYKTNELDRILN"
     gene            complement(6608..9273)
                     /locus_tag="CPT85_04070"
                     /pseudo
     CDS             complement(6608..9273)
                     /locus_tag="CPT85_04070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002353206.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
     assembly_gap    6779..6780
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    9414..9415
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(9450..10265)
                     /locus_tag="CPT85_04075"
     CDS             complement(9450..10265)
                     /locus_tag="CPT85_04075"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24188.1"
                     /translation="MVRFFQKAFSLAEMLIVLVIISIVVVFTLTLIKPDDSALRIQYY
                     KAFNTVATAAYNIYEKALTENKEMYENEELCSFLKYYINTSSKYSCNQSYVDLSGSAF
                     NKDNIQFTASNGMVFYMSRSFTTNYFQKEQKHRIIWVDINGKRRPNSAKWHENKPADI
                     VAFDITDGGEVVPLGYPKIDVRYMSANVVYSDEEQKQDTMSFYKAQRTAFGQQQYEYE
                     VFSYNFDQSDPRFGTSVLQIAPQFINKENTQQAQICKNDDGEIFPRCSLDIIK"
     gene            complement(10259..11737)
                     /locus_tag="CPT85_04080"
     CDS             complement(10259..11737)
                     /locus_tag="CPT85_04080"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24189.1"
                     /translation="MKKIFEEGFSLSEALIFLLITCLVMIATMPLITIRHIKLPERAP
                     HGKWACKLINGQMYSATAANVNAKLPPDEKWKKGCTFPELPSSVSYVIVQAIGGGASG
                     RQGDMTIGSESKTVDLFPSDEDKSVYTVEETGKYRIYFPGESGKRGYLTPAYFDVMLN
                     GFKYMSCAFDSSLPNSVVPSVTFDYDLKRGDKLVLDIKDSDTQNKFNNSSENLCDSSR
                     PILAQWVDEHGVSHTEPYKFQSVVHKPGNNGKIRILSLQDGANTKNLVEIKGSGGGYY
                     ASSTDSCNIDCSRRYTALYDRAMWKLEDYINTSSAAEFQKSFSSNKTAKISSQGHTLS
                     YYGGCGGAAGQVNTVVVEKPDKSNIEIKIGKGGINGGDGEDTVFDYIVASGGIGCADN
                     GVNASVNGTDGGSANTMAALDSVGGKGGDGKIGLPLLSYTQMKGKDATGLGSGGGGGG
                     IALKINKPIEEYLNNSLIYQLENYKELGAVGNGASGGVIVSW"
     gene            complement(11749..13131)
                     /locus_tag="CPT85_04085"
     CDS             complement(11749..13131)
                     /locus_tag="CPT85_04085"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24190.1"
                     /translation="MVLTRKKTAYTLAEMLIVLLIIALIAIGSTPLLVKKGKKQKEKL
                     THGTYACTVFDGEEYFFHSDKKNDTIPYSKEGWARGKCGTSFVMPYKSGLLNVKLTGG
                     GGAGGDASVKWDDSVAPRAFYDDNTYIVSTSGYYDIIVSGSKGSSSSVTQWNATIDGK
                     EHNCFAETAKAGETAFFSGAVYLNKSDKIDIKFEHESMGSLNLDCSSQIQIPSSQIGQ
                     NGKDIVISKNSSTILRVEGSKAGSYRCNSANLCAGHFEARQGDNGSVTTYTSFADKEE
                     SVGSNGYDYGVVIIKWSDKNNTQKAFLPKAGCGGTAGEIRSALYPILRNKLPEVKVGS
                     GGTSQKEAQDTTFGSLRASAGRNNVVCSTKTDDYNGVEGKTFSAIADLNSKGGAGGIS
                     VPTEEINGSDATGFSSGGGGGAIYFDTIPSYDTSKSYEDNLDPFLNGVQRWNQGSGGK
                     GGEGLLIITW"
     gene            complement(13144..14856)
                     /locus_tag="CPT85_04090"
     CDS             complement(13144..14856)
                     /locus_tag="CPT85_04090"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24191.1"
                     /translation="MKKKINIKNVFSGFSLAEALIVLLVVAIIVAISAPMITKRRKSL
                     RENAVHGKWACKYIDGTLHSATAENVDDPLPDDSEWEKDCKFPSIAKNVKYLWVEVYG
                     GGGGGARGYATPWISKTYSYDLGTPAPRDGEYDITASVSNRGYSMSWKNENNLNAEGI
                     YYSNDPDTRTVCNGRYFGEYEKQDDVLTYASCKTYTEKDLCIHTGDSSAIKRDDCINS
                     IERAGTYCYRNTAERPPYYYNLPAQLLAQCKASGYENCTFNPNSVTYTKTKQKCLNTR
                     SLPYVYYGSSAPGISGKVYLKEGEYLKFKVDNQGEYYPSGDLGGYEHYSANDGDDYAL
                     YHHKSEIQDGVMHVGEKLVAKMSGGKAGIFTETTSKSSRCCTNCGKLDKYPNSSKTST
                     VFCAKDGENGKTTLSDDYSYLKKNSSTSKSQMSILNQDFEYYNGCSGANGSYSANLFP
                     ASRNHNYEIKVGKGGNGATGEDDNTVSKSAQDGKDSYFGWIRGAGGKGAGDYCKTSTV
                     QEQETNIYNSSTGGKGGSVEFPDGKIPQRNYALTIEEDKYPNSRWTVTDGQNGKSGII
                     VVSW"
     gene            complement(15048..16004)
                     /locus_tag="CPT85_04095"
     CDS             complement(15048..16004)
                     /locus_tag="CPT85_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008907993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="DAB24192.1"
                     /translation="MSAILEVKNLNLGFNLSEGFSQAIYDVSFSLNKGETLAIVGESG
                     CGKTISTMSVLQLLPQTAQIKSGEIIYNGENLLSFNQKQMQKIRGKKIALIPQDPMTS
                     LNPLYTIGNQMLEIIELHQNVKGKEAFNIAVEALERVKIPDAKAKMKSYPHEFSGGMK
                     QRVIIAMALACNAEIIIADEPTTALDVTVQAQIMEILRDVKEKFNMSVILITHDLGIV
                     AQNADKIAVMYAGRVVEYAPVDELFNDPKHPYTKALLNVILDINTDKVETIEGQPPSV
                     TDNIKGCPFHPRCKYCMEICTHKEPELKMTGSNRKVACHLYS"
     gene            complement(16004..16858)
                     /locus_tag="CPT85_04100"
     CDS             complement(16004..16858)
                     /locus_tag="CPT85_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012636094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="DAB24193.1"
                     /translation="MTQVKFTKMQGAGNDFILMEYGEYKKIEDKFPEIAVKLCDRHFG
                     IGADGIFVPVENPKTYSDLEWLFYQADGSTAQMCGNGMRCFARFCFDKKIVNKRKFTV
                     HTGAGKIVPEVLEDLRVKVNMGKPILEPEKIPFKGSKNLNYPLWDGVKKFTVNAVSMG
                     NPHCVIFVKDDEDNHALAKKYGDAIEHDNLFPEKTNVEFVKVISREEIDVAVWERGCG
                     ITLACGTGACASVVAAILNGLCDNKVKVNLPGGSLTIEWAGNSQNTDFDVLMTGEAQY
                     VYTGIIEI"
     gene            complement(16873..17277)
                     /gene="atpC"
                     /locus_tag="CPT85_04105"
     CDS             complement(16873..17277)
                     /gene="atpC"
                     /locus_tag="CPT85_04105"
                     /inference="COORDINATES: protein motif:HMM:TIGR01216"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="DAB24194.1"
                     /translation="MSKKINLKIITHEKEVFNDRVDAVYSKSVEGEFGILPDHQPFMA
                     ALDIGVTRADVEGKMKHFTTMGGIFQFKDNEALILTDLAECGSDIDVTRAKSAKERAE
                     ARIGSHEVEIDNARAQIALAKAMARLKAATKD"
     gene            complement(17363..>17554)
                     /locus_tag="CPT85_04110"
     CDS             complement(17363..>17554)
                     /locus_tag="CPT85_04110"
                     /EC_number="3.6.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012499036.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. The beta chain is a
                     regulatory subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="DAB24195.1"
                     /translation="LSQPFFVAEQFSGIPGKYVKLEDSIKGFKEILEGKHDDLPEQAF
                     YMVGTIEEAIAKAEEMKNA"
BASE COUNT         4494 a         3789 c         3396 g         5815 t
ORIGIN      
        1 cttaaaaaaa ggaagaatta aaataacttt attacaaaaa cccccctcac tgtagtgaag
       61 gggtttttgt gtgattactt ttactttgag caaaccgact ggttttgtat catttttaca
      121 agaagctcgt ttgctttttt gagctggnnn nnnnnnnnnn nnnnnnnnnn nnnnnnatca
      181 ggtgcaatac cttttttgtt gatgtctgta ccgtttggtg tcaggtattt ttggattgta
      241 atatttgcac cggagccgcc catgagtttg ttaacttctt gaacaagccc tttgccaaag
      301 gtgttttcac ccacaagcaa tgcgcgtttg ttgtctttca ttgcgcccga aaaaatctca
      361 ctggccgacg cagagccttt gttgataagg ataacaatcg gtttgtccgt tacatatctt
      421 tttgtagctc tggttgtttc tttgtaaccg tcgcggtcaa ccgtgctcac gatgattccg
      481 ccgtcaagaa acatatctga tatcaaaatc gcgttgctca agagtccgcc cgggtttgag
      541 cgaaggtcta tgataaaacc ttttttgttt ttgtactggt taagtgcgtt ttcaaactct
      601 gttgtagcat ttttactgat aaaagagctg agtctgatat aacccacaca gtcgtccagt
      661 tgtgcttttt caggtgtttt tgtagaaacg gatttaatct ctatttccgc acgctggatt
      721 ttgtatagtt tgttttcctg attttttctc ttaatcaaaa gggttacata agtgccctct
      781 tcgcctctaa tctggtctgc ggctttatca attgtaatac cttttgtaga tttgccgtcg
      841 atttcaagaa tttcgtcttc ggccagaagt cctgcttttt ctccgggagt gtcttcgata
      901 ggagcaataa ttacgagttt gccttctcta aggccgattt gcacaccaat accttttaaa
      961 gaacctttga tagagcttgt ttcgtcttca aactctttgg ggtcaagaaa ttttgtataa
     1021 gggtcgttaa ggctggccag cattgtctgg attgcgacat atgcatcctc gtctgtatta
     1081 ataaccttgt catacttgtt tttccatctt ttccagtcct gctggttgtt tgtatggtca
     1141 acgtattttg agttaatgag tttccacacc tgatcataca actgctgcgg agaagatgcg
     1201 aacaccccgc cggatgtggt tatagcactt gcaacaaaaa tcaccagaag cgcaaatgct
     1261 gtaagaccgt atttttttaa gttaattttc aaaattctac ctctttttcc ctactttcgt
     1321 caggtcaaca atataatacc ataaagcacc cgtattttta tatcggatac cttgctaacc
     1381 tttcctcaac caatttaatc cagtttcgtc tccgactcac tttttcaatg ggtacacaat
     1441 tagaccgtat aaatttttat ttgtttcata aatctaataa atatttattt ttgtaacaaa
     1501 gaatttataa aataagctcc tcaagcggca ttgtagagag tttttggcgg tagtcataga
     1561 tttttgcaag ctcggtttcg agctcttcgt acatttcaga ttcttttatc ttggacagtt
     1621 caaccgcttt agaaaacatt attttgtact tgtctgcatt tttttcaaca acctcgaaca
     1681 tccctaattc ctcgagcatg tcaaagcaca gctctgtcac ttcgtcagac acagcaagaa
     1741 aatccgaaat atcattgaga ttcacctcgc cgtttttgtt tgtgcacacg tatttgagca
     1801 tgccggagat attcttaaca agctcctgcg cgtcaatttt gcggttattg tagttcataa
     1861 agtgcaaaac tcttgcgcct gattttttaa tcaaattctg catggcagct tcgctcgtag
     1921 ggtagtcaaa aaacataatc tgcgcgcatt tagaaagatt ttttcttgac ctgatttttg
     1981 gtgcaatctc tttgtaggtt ttgagagtat cgcagattgg tttgctctgc gcaaaaatct
     2041 ctgnnnnnnn nnnnnnnnnn nnnnnnnngc ggaagatatt tgttttttta cggtggtcat
     2101 agagtttgaa gtcagacttt tcgtctttta caacaaactc tgattttaca tcctgcacat
     2161 cgagctgtat tgttgtaatt ccgttaaaaa cattgagctt tggataaaac acaacatcaa
     2221 actctttgcc ctgcgggata ttcaggctgt catggttcca gtaaacgcac tcaaacggcc
     2281 tgccgtcaga gctttcgcaa aatattttaa ggtggttatt tttttgcccc attgttttaa
     2341 agctgctgag cacaaggttt tttacagcaa aaacaggggt cttgttgcct tcgccaaaag
     2401 gctcgagctg ttttattgtg tcgattaact caacaccaat atccgtaccg tcaagctcaa
     2461 ggtcaatatt aacacgcggt acaagctctt ttccctctgc ctgctgcttt gtggactcta
     2521 taagcgcaga cttaactttt tcaaacggtg attttttggg gtcaaaaaca agccctgcag
     2581 cctgcgagtg gccgccaaag tattcgaaaa ggctttcgtt atcggcaata acgtttctga
     2641 tgtgcacttc tggaatgctt cttgaagagc agcgcacaaa acctgtgttc tcatccaaag
     2701 tcataagaaa aacgggttta tagaattttt caacgagctt tgacgccaca atcccgatta
     2761 tgcctatgtg ccagccctgt ttataaagca caatcgcatc ttgcgggggt tcgttttgta
     2821 tcatctcaac agcttcgtta aaaatatcct cgcatatatc ctgacgtatg cggttaaaat
     2881 tgttcaactc ttccacgcac aggtcaattt ctgatttgtt gtcggaaatc aaaagtttta
     2941 cagccggctc cacagtgtcc agacggcctg cggcattgat tctcggtgca actccaaagg
     3001 caatattttc tgatgttacc ccgtttttaa tctcataacc gcctgattcc agcagttttg
     3061 tcaaaccgta atgaatgcct gattcaatga gcttcaatcc ggcatacaca aaagagcggt
     3121 tttcgtatag aatcggcacc acgtctgcaa ttgtgcccac tgcaacaaac ggcagaaggt
     3181 tgtttgcaaa gtcataatct ttttttgttt caagaagcgc gcatgcaagc ttaaacgcaa
     3241 ctcccacgcc ggccagctca ttgagtgcat tgatttgctc gacattaagg tctttatcaa
     3301 gagcattgac agctttcggg ttaataatag cataagcttc cggcagaacc gcgggtgcct
     3361 cgtggtggtc tgtgatgatt acatctacct taaacccgtt tgcaaaagcc acctgctcaa
     3421 cgtcgctaac cccgcaatct acagtgataa tgagttttgc tctttgtttt gcaatgagtt
     3481 tgacaagcgc ttttgtattg agcccgtggt tttcgttttc acggttaggg atgtaatagt
     3541 caacattcgc tcccagatgt gtaagcgttt tataaagaag agaggtcgat gtaacgccgt
     3601 cacagtcaaa gtctccgtag attattattt tttcctgttt ttctattgcg tcaaaaattc
     3661 tatccacgga tttttgcata tcgcaaaaaa caaaaggcga ggtaatcttc atttgagaag
     3721 gattgagaaa atccgtaatt ttttgcacgg aatcaatgcc cctttgcaca agcaattgtg
     3781 caagaagccc gctccccgca acgtttataa tttcctgcgg gatgtcttta tgctctttta
     3841 ttttccaaac tttttccaag attatacttc ttcgtcgtcg tcttgttcgt ctttgtcttc
     3901 tttaattttg tcgacaacca tttttgccat ttctttggca accgcttttt gaacaggcac
     3961 agggctgttt tccagcatgt tgatggctgt tctcactgtt gtatcaagat cataccatct
     4021 gcttttgcct ttttccacaa ggccctcttc aacagaagtc atcatgtctt caacgcttgt
     4081 gaaagtgtgt tcagagatgt tgtgctctat gatgatttta atcaaattga gcgcaacttt
     4141 tatctgggtt tcgtcgtcag atttttccag tgtgctcatt gatttagaca agatagggtc
     4201 tttgtcatac catctgcggt agttttcgct gtattcttct ttcatacctc actccttagg
     4261 ctgtatcacg attttttgta tattacccct ttgccgcttt tggggtaggt ccattttatg
     4321 tttttgcaag caattctgca agcgccgcac tccagacatt tttcgtagct tacggtgagc
     4381 tttttatccg tctcgctgta gctgtatacg tttgccggac atattattgt acaggttttg
     4441 tccaaacatt gcaagcattt tgattgctcg ggctcaaggt ggcattttga gtctgttttg
     4501 tattttagtg tatagagttt gtcttcgatt tttttgtcca ttattttaat atcccgaata
     4561 ctatttttat gccagcaatt gcgtctttaa aaagctctga caggctgcgt tttgtaaaaa
     4621 attcttttgt gaatttttgg aaattacctt ttttgnnttt gggaaccccg tcagcacagg
     4681 tgaagatgct gaaaaattca ttgactttgg cggggtagta tgtcaaaaac gaacccgcac
     4741 ggccggatag ggtgtgcaca acgtctttgt aggttttcaa gtcctttaaa ataaagctgt
     4801 tttccaactt ctttttgtac aaacaaaggg tgtttgaaga aaaatcaccg cgttcaaacg
     4861 cctcgagagc tgtttgtgca gcaagttttc cgctaatcat agcaagattc gtgccctcaa
     4921 aatgcacatt gttaacaagc cccgctgcgt cgcctgccac cattgccccg tcagtataga
     4981 gtttcggcac ggctttgtac ccgccttcgg gtatgaggtg agcggaatat tccaacaact
     5041 cgccgccttc tatgatttct gcaacaaaag gatgtttttt tacagcgtct aaaagctcat
     5101 agggtttgac tttgcgtgtt ttcaagtcct cgagagatac ccctattccc actgcaacag
     5161 aatctttgtt tgtataaaca atacccatgc caaacatttg tgcaagcggc cccccgacaa
     5221 gttccatggc gcagcctgtg ccttctttta aggaaaatct tttttctata acctcaggcg
     5281 caagtctgat tacctctttt acggcaaggg caacgttttt gggctttatg tcttctctaa
     5341 ggcctatttg tcttgccaga agagagttta cgccgtcggc aattatcaca acatctgcgt
     5401 aaaaatcctc tacatccgtt gtgataccaa caactttgcc atcttttaca ataagctctt
     5461 ttacaagggt gtcgggtgca aaataaacgc cctctttaac agcctcttgt acacaccatt
     5521 tatcccattt tgcacgtatt gcaacaaaag cgcactcttc gtgagacggg tttttatatg
     5581 aaatttccgt ggagtcttca tccgacaaca agacataatt gtgttttgaa atatatcttt
     5641 caattggtgc ttctttatag ttgggaaaaa tctcagaagc agcgtgagag tagattaccc
     5701 cgccatacat gttttttgca cccgcataag gagcacgctc aacaagcaca actttttttc
     5761 cgcctcttgc tgccgtaatt gccgcactga caccggccgg accagctccg acaactatta
     5821 tatcaacttt gttttgtatg atttcttcgg acatttttta ttgaactccc ccgtgacaaa
     5881 aacaattata ctattaattt acgctctttt tcaataaacc tttaatactc ctgtgggata
     5941 ttgtttattt gtgaaagaga gattatgata gctttgtaag attaaaataa ggagttttta
     6001 tgaataaagc aattgtctac acatcagcca catgccctta ttgcgtaaaa gcaaaaaggc
     6061 tgctgcaaat gttaaatatc gaatttgaag aaatcaactg cgatgaaaat tttgatgaaa
     6121 tgtgcgcaaa tttgagccaa aaatacaacc agccatgcat ttcaactgtt ccgcaaataa
     6181 taattaacga caattatgtt ggcggatacg acgatttgga acacctttac aaaacaaatg
     6241 aattagacag gatattaaat taagattgtc ttgaaaataa ataaaaatgg tttataatta
     6301 ttatataggg tgaagcccta aaaaaatatg acttttttag agcttcttct tcatacccta
     6361 taaccaaatt aagaaaattt taaggactgt tataattgcc gttataacgg tctttattat
     6421 tttcatggtc atagtatcac cccctttcca gccgatttcc tcatttaatc gagtgtgccg
     6481 atgggagtgt ggtatataac cctattttta ttttacccaa tattacattt atgtaaaaca
     6541 aaaacccctc acaaaacgca aggggttttt gttcttaact gttgaacagt ttcaagaatt
     6601 tttcgtatta tttacagccg agagtaccga cttcttcttt tgagtgtttg aactcaatta
     6661 ccgcttgagc agcagcaagt ctggcttgcg gaactctaaa cggtgagcac gatacataat
     6721 tcaagccgat tctgtggcag aacttaacag aagcagggtc gccgccgtgt tcaccgcann
     6781 gtgcggtttg acgcttaggg ctttgtccag tgcaattttc atcaactggc caacgccttc
     6841 ctgatccaga gtttggaacg gattggaagg cagaattttg ttatccacat atttttgcaa
     6901 gaatttgcct tctgcatcgt ctcttgaata gccaaatgtc atctgtgtaa ggtcgtttgt
     6961 accaaatgag aagaactcgg catattctgc aatctggtca gctgttaaag cagcacgagg
     7021 aatttcaatc atcgtaccaa tcatgtaatc aactgatacg cctttttctg ccataacttc
     7081 tttggcaacg cgttctgcta cagcttttgc ttctttaagc tcatttacgt ggccgacaag
     7141 cggaatcatg acttcgggtt ttacatcaag accttctttt ttcaagtcgc atgcagcgta
     7201 gaagatagct ctaacctgca tttcattgat ttcagggaat gtaagaccca gacggcatcc
     7261 gcgaagaccc atcatcgggt tggattcaga catcttttca acaagatgaa gcatttcttc
     7321 atcttttgca tagtcttgat gcagtgcttt tttggttgca acagtggcaa tcaattcttc
     7381 cttggatggc aagaactcgt gaagcggcgg gtctaaaaga cggattgtca taggtttgtc
     7441 gccaagagcc ttgaacatgt catagaagtc ttgatactgc ataggcagca gatgatttaa
     7501 cgcttctttt ctttgttctg tattttctgc aataatcatt ttttgaaccc aaggcaatct
     7561 ggccggatcc atgaacatgt gctctgttct gcaaagacca acgccttctg cgcccatttc
     7621 aagagctttt gcaacgtctt gaggtgtgtc agcgttagcg cgtacgctca agagtttaac
     7681 atcgttaacc cattcaaaga gttttttgaa gttgtcatcc aaagtcggag gaacaaggtg
     7741 tacagagcct tcaaatactt cacccgtacc gccgtcaagc gagataatgt cgttttcgtg
     7801 gtagactttg ccgcttccgt cagttaatgt accgttttta aggtcgattt taaggtcttc
     7861 gcagcctgca acacagggtt tgcccatacc ttttgcaaca acggcagcgt gagaagtcat
     7921 gccgcctctt aaagtaagta cgccttgaga agcaatcata ccgtggatat catcagggca
     7981 tgtttccaaa cgcacaagta taactttttc gcctgcgctg cctctttgcg cagcttcttc
     8041 tgtatcaaaa acgattttac ccacagcagc acccggagaa gctgcaaggc cttgagcaat
     8101 cttgtgtgct tcttttttag cagcggggtc aaagtcaggc aagagtacct gataaagctg
     8161 attcgggtca acgagctcga ttgctctttc tttatcaata atgccttctt ctgccatttc
     8221 tacagctata cgtacagaag cttttgcagt tcttttaccg tttcttgtct ggaggatgta
     8281 gagtttgcct ctttcgattg taaattccat atcctgaaca tctttgtagc cttcttcaag
     8341 tttttttgca atatcaacgt attgtttgta ttgttcgggc atttcttttt caaggtctgc
     8401 aatcggatga ggtgttctga tacctgcaac aacgtcctcg ccctgtgcgt ttgtcaagta
     8461 ttcgccatag aatttgtttt cgcctgtgga ggggtttctt gtgaaagata cgcccgtagc
     8521 acagtcgtcg cccatgttac cgaagaccat tgtttggacg tttacggctg taccgtagtt
     8581 gtggtcaatt ttgtagtggt ttcgatatgc taccgcgcgc gggatgttcc atgaacggaa
     8641 cactgcttca atagcttctt ccaattgaac ataaggatct tgagggaagt ctttgcctgt
     8701 ttctgcttta attaaagctt tatatggttc aatcaaagat ttccaatcat cggcagagag
     8761 ttcaacgtcg agtttatatc ctttttcttt tttgattttg tcgatgtatt cttcaaactt
     8821 cattctttca atgtcccatg caacagagcc gaacattgtt aagaaacgtc tgtatgagtc
     8881 ataacaaaaa cgagggttgt tggtcaattt aatcatgcct tcaacggttt catcgttcat
     8941 accgaggtta aggattgttt ccatcatgcc gggcattgag agtctggcgc ctgaacgtac
     9001 tgaaacaaga agagggtttt cgctgtcacc gaattttttg ccggcttttt cttcaacttt
     9061 tttcaaagct gctttaactt cgtccataac cccataaggc attttgttgc cgtggtttat
     9121 ataatccata caggtttctg tagtgattgt taaccccgga ggtacgggca agcccaaatt
     9181 agtcatttca gcgaggtttg cacccttacc gcccagaaga ttacgcattg aagcatcgcc
     9241 ttcttcaaat aaccatactc gtttttctgt catagtttgt ctccttttaa taaactgagt
     9301 atatcgtgcg tttttatatt ttatgaaacc attagtttta cagtctctag actagcatat
     9361 tttttttgaa tacacaaacg gtttttcatc attttaaaaa gacatcacaa aaannataat
     9421 aatacccgtg gtgctaaaaa aaataacatc tattttataa tatccaggct gcagcgggga
     9481 aaaatctcac catcatcatt tttgcaaatc tgtgcttgtt gtgtattttc tttattgata
     9541 aattgagggg caatttgcaa tacgcttgtg ccaaatctgg gatcggactg atcaaaattg
     9601 tagctgaaaa cttcgtattc atactgctgc tgtccaaatg ctgtgcgctg cgctttgtaa
     9661 aacgacatgg tgtcttgttt ttgttcttcg tctgaataaa caacgtttgc gctcatgtat
     9721 ctcacatcta tttttggata accaagggga acaacttctc caccgtctgt tatatcaaag
     9781 gcaactatgt ctgcgggctt gttttcatgc cattttgcac tgtttggcct tcttttgccg
     9841 tttatatcaa cccatattat cctgtgtttt tgttcttttt gaaaataatt tgttgtaaaa
     9901 gagcgtgaca tgtaaaaaac catgccgttt gaagcagtaa attgtatatt gtctttatta
     9961 aacgcagaac ccgataaatc tacatatgat tggttacagg aatatttact gcttgtgttt
    10021 atatagtatt ttaaaaaaga gcacaattcc tcgttttcat acatttcttt attttcggtg
    10081 agagcttttt catatatgtt ataagccgca gtggcaacag tgttgaaggc cttgtaatat
    10141 tgtattctca atgcagagtc atccggttta atcaaagtaa gagtgaacac cacaacaata
    10201 ctgataataa caagcacaat gagcatttct gcaagagaaa aagctttttg gaaaaatctt
    10261 accatgagac aattacccct ccagaagctc cgttgccaac tgcaccaagt tccttgtaat
    10321 tttcaagctg ataaataagt gaattattaa gatattcctc aataggttta tttattttta
    10381 aggcaattcc cccgcctccg ccaccggaac ccagacctgt tgcatctttg cctttcattt
    10441 gtgtataaga caacaaaggc aaacctattt ttccatcacc gcctttacca cctacagaat
    10501 cgagtgcagc catggtgttt gcgctgcctc cgtctgttcc gttgacagaa gcattgactc
    10561 cgttatcagc acaaccaata ccgcctgatg caacaatata gtcaaatacg gtatcctcac
    10621 cgtcaccgcc gtttatgccg ccttttccga tttttatttc aatatttgat ttgtcaggtt
    10681 tttccacaac aacagtgtta acctgcccag cagccccgcc acagccgcca tagtagctaa
    10741 gagtatgacc ctgggagctt attttggcag ttttgttgga agaaaagctc ttctgaaatt
    10801 ctgcggcaga gcttgtgttt atatagtctt caagtttcca catggctctg tcatacagtg
    10861 cagtgtaacg ccttgagcaa tcaatattgc aagaatccgt ggaggaagcg taataaccgc
    10921 ctccgctgcc tttaatttcc acaagatttt ttgtgtttgc accgtcttgc aaagacagga
    10981 ttctgatttt tccgttattt ccgggtttgt gcacaacaga ttgaaacttg tatggctctg
    11041 tgtgtgatac gccgtgctca tccacccatt gagcgagaat tggtcttgag gaatcacaaa
    11101 gattttccga gctgttatta aatttgtttt gtgtatcact gtctttgata tccaaaacaa
    11161 gcttgtcgcc tcgtttcagg tcataatcaa acgtaacaga cggcacaaca ctgttgggca
    11221 aagaagaatc aaatgcacaa gacatgtatt tgaacccgtt gagcataaca tcaaaataag
    11281 caggtgtaag atatcctcgt tttccggatt ctccggggaa gtaaattctg tattttcctg
    11341 tttcttcaac agtataaaca gatttgtctt catcagaagg gaaaagatcc acggttttgc
    11401 tttcagagcc tatggtcata tccccctgac gccctgatgc gccgccgcct attgcctgta
    11461 caataacata cgaaacagaa gacggcagct cgggaaaagt acagcctttt ttccattttt
    11521 catcaggagg aagtttggcg tttacattgg ctgccgtagc agaatacatt tgtccgttta
    11581 tcagcttaca ggcccatttc ccgtgaggag ccctctctgg tagcttgatg tgtcttattg
    11641 ttataagagg cattgtcgct atcataacaa gacaggttat taacaaaaag ataagtgctt
    11701 ctgaaagaga aaaaccttct tcaaatattt ttttcattta atactccatt accaagtgat
    11761 aattaacaac ccttctccgc cttttccgcc ggagccctga ttccaccttt gtacaccgtt
    11821 taaaaacgga tcaagattgt cttcgtaaga ctttgatgtg tcataagaag ggattgtgtc
    11881 aaaataaatt gcaccgcctc caccgcctga tgaaaaacct gttgcatcag agccgtttat
    11941 ttcttcggta ggcacagaga ttccgcccgc accgcctttt gagttaaggt ctgctatagc
    12001 gctgaaagtt ttgccttcaa ccccgttgta gtcgtctgtt tttgttgaac atacaacatt
    12061 gttacggccg gcagacgctc ttaatgagcc aaaggtagtg tcttgagctt ctttttgaga
    12121 agtaccgcct gatcctactt ttacttccgg caatttgttc ctcaaaatag gataaagagc
    12181 agatcttatc tcgcctgcag tacccccgca gccggctttg ggcaaaaagg ctttttgagt
    12241 attgtttttg tcagaccatt ttattattac aacaccgtag tcataaccgt ttgaaccgac
    12301 tgattcttct ttgtctgcaa aagacgtata tgttgtcaca gaaccgttgt caccctgacg
    12361 tgcttcaaag tgtccggcgc acaaattagc tgaattgcat ctgtaagaac cggcttttga
    12421 accttcaacc ctgagtattg tggaagagtt ttttgatata acaatatctt tgccgttttg
    12481 gccgatttgt gacgaaggta tttgtatttg agaagagcaa tctaaattca aagaccccat
    12541 tgactcatgt tcaaatttta tatctatttt gtctgatttg ttgagataaa cagctccgga
    12601 gaaaaatgct gtttcgccgg cttttgcggt ttctgcaaaa cagttgtgct ctttaccgtc
    12661 aatagttgca ttccactgtg ttacagaaga gctgctgcct ttggagcccg agactataat
    12721 gtcataataa ccgcttgtgg acacaatata agtgttgtca tcataaaaag cacgaggagc
    12781 aacagaatca tcccatttta cagaagcatc accgccggca ccgcctccgc ctgtgagttt
    12841 tacatttaaa aggcctgatt tgtaaggcat tacaaaagaa gtaccgcatt tgccgcgagc
    12901 ccagccctct tttgaataag gaatggtatc attttttttg tcagaatgaa aaaagtactc
    12961 ctcaccgtca aaaacagtac aggcatatgt tccatgggtg agcttttctt tttgtttttt
    13021 gccttttttt accagcaatg gtgttgagcc tatagcaatg agtgcaatta tcaaaagtac
    13081 tataagcatt tctgccagtg tatatgctgt ttttttgcgt gttaaaacca ttataaatcc
    13141 tttttaccag ctcacaacaa taattccgct cttaccgttt tgtccgtctg ttacagtcca
    13201 tctgctattg ggatatttgt cctcttctat ggtcagagca tagtttctct gtggtatttt
    13261 cccatcggga aactcaacag aaccgccttt gccgcctgta gatgagttgt aaatattagt
    13321 ttcttgctct tgtacggttg atgttttgca ataatccccc gcgcctttgc cgccggctcc
    13381 tcttatccat ccaaagtaag aatccttacc gtcttgtgca ctttttgata cggtgttatc
    13441 atcctcgccg gttgcaccgt ttccgccttt gccaactttt atttcataat tatggtttct
    13501 tgacgcaggg aacaaattgg cactataact gccgttggca ccgctgcatc cgttgtagta
    13561 ttcaaaatcc tgatttaaaa tagacatttg gctttttgat gtcgacgaat tttttttcaa
    13621 atagctataa tcgtcactca aggtagtttt gccgttttca ccatcttttg cacagaacac
    13681 agtgcttgtt tttgatgagt ttggatattt gtccaatttt ccgcagtttg tacagcatct
    13741 tgaggatttt gaggttgttt cagtaaaaat acctgccttg cccccgctca tctttgcaac
    13801 aagtttttcg cccacatgca taactccgtc ttggatttct gatttgtggt ggtaaagcgc
    13861 ataatcatcc ccgtcattag cggaataatg ttcatacccg cctaaatctc cggaaggata
    13921 atattcgccc tgattatcca ccttaaattt gaggtattcg ccttctttca ggtacacttt
    13981 tcctgaaatt ccgggtgcgg aagaaccgta ataaacataa ggaagactcc ttgtgttcag
    14041 gcatttttgt ttggtttttg tatatgttac agaatttggg ttgaaagtac aattttcata
    14101 accggaagcc ttgcattggg cgagcagctg cgcggggagg ttgtaataat aaggagggcg
    14161 ctctgctgta tttctgtagc aatatgtgcc tgcgcgttca atgctgttga tgcaatcatc
    14221 cctttttatg gcagagctgt cacctgtgtg gatacacaaa tctttttccg tatacgtttt
    14281 gcagcttgca tatgtaagta catcgtcttg tttttcatat tctccaaagt atctgccgtt
    14341 gcatacagtc cttgtatcag ggtcgttgga ataatatatt ccttctgcat tcaaattgtt
    14401 ttcatttttc caggacattg aataccctct gtttgaaaca gaggctgtta tatcgtattc
    14461 accgtctctt ggggcgggag ttccaagatc atagctgtat gttttgctta tccacggggt
    14521 agcataaccg cgtgcaccgc caccgcctcc gccgtaaact tctacccaca gatattttac
    14581 attttttgca attgatggaa atttgcaatc tttttcccac tcactgtcat caggaagcgg
    14641 gtcatcaaca ttttcagctg ttgcagagtg cagtgttccg tctatgtatt tgcatgccca
    14701 tttgccgtgg acagcgtttt ctctgagaga ttttcttctc tttgtaatca tcggagcgct
    14761 tattgctaca ataattgcaa caaccaatag cacaatcaaa gcttctgcaa gcgaaaaacc
    14821 ggagaataca tttttgatat tgattttctt tttcattcac aatccataat aattaatgtc
    14881 tttttttatg atatggattt tgaaacaaca attcactacc tcaagacata atccaccgtc
    14941 ccttacctta ccttacagaa aagcttacgg ggcctgggtt ttgttgtcaa gaaactctgt
    15001 gttacatatc ttaatatttc tgtttttcgt tacaatttat ttacaaatta cgaatataaa
    15061 tgacacgcta cttttctatt gctgcccgtc atttttagtt cgggctcttt gtgtgtgcat
    15121 atttccatac aatatttgca ccttggatga aaaggacagc cctttatatt atccgttaca
    15181 gaaggcggct ggccttcgat tgtttccact ttatcagtat tgatatcgag tattacattt
    15241 aaaagagcct ttgtataagg atgtttaggg tcattaaaaa gttcatctac aggggcatat
    15301 tcaaccaccc tgccggcata cattacggct attttgtcgg cgttttgggc aactatgcca
    15361 aggtcatgcg tgatgaggat tacagacatg ttaaattttt ctttaacgtc tcttaaaatc
    15421 tccataattt gagcctgaac agtgacatcc agcgctgttg taggttcgtc cgctatgata
    15481 atttccgcat tgcaagcaag cgccattgca atgataacgc gctgtttcat tccgccggaa
    15541 aactcatggg ggtatgattt catttttgct tttgcatcag gtatttttac cctctcaaga
    15601 gcctctactg caatattaaa agcttctttg ccttttacat tctggtggag ctcaattatt
    15661 tcgagcattt gattgccgat tgtatacaga gggttgagcg aggtcatggg gtcttgcggg
    15721 ataagagcta tcttttttcc cctgattttt tgcatttgtt tctgattgaa actaagcaga
    15781 ttttctccgt tataaataat ttcaccgctt tttatttgcg ctgtttgagg taaaagctgc
    15841 aatacagaca ttgtagaaat tgtttttccg cagcctgatt cacctacaat ggcgagggtt
    15901 tcgcctttgt ttaaagaaaa actgacatca tatattgcct gactgaaccc ttcagacaga
    15961 ttgaacccta agtttaagtt tttgacttct aaaatagctg acattaaatc tcgataatac
    16021 ccgtgtaaac gtattgagct tcacctgtca ttaatacatc aaaatcagtg ttttgtgaat
    16081 tgcccgccca ttcaatagtc agtgagcccc cggggagatt aacttttacc ttgttgtcac
    16141 aaagtccgtt caaaattgcc gcaacaacag aagcacaagc acctgtaccg caagccagag
    16201 tgattccgca gccgcgctcc catacagcaa catcaatttc ttctcttgaa attactttta
    16261 caaactctac atttgttttt tcagggaaca ggttgtcatg ctcgatagcg tcaccgtatt
    16321 tttttgcaag agcgtggttg tcctcgtcgt ctttaacaaa aataacgcag tggggattgc
    16381 ccatgcttac agcgttcacc gtgaattttt taaccccgtc ccacaaaggg tagttgaggt
    16441 ttttactgcc tttaaaaggt attttttcgg gttccaaaat aggtttgccc atgtttacct
    16501 taaccctcaa atcttcaagg acttcgggta cgatttttcc tgcacctgtg tgcacagtga
    16561 attttctttt gtttacaatt tttttgtcaa aacaaaaacg agcaaaacat ctcatgccat
    16621 tgccgcacat ttgcgcagta gagccatctg cctgataaaa cagccactcc aaatcagaat
    16681 aagtttttgg gttttccaca ggcacaaaaa tgccgtcagc accgatacca aagtgtctgt
    16741 cacaaagttt tactgcaatt tcagggaatt tatcttcgat ttttttatat tcaccgtatt
    16801 ccatcaaaat gaaatcattg ccggcaccct gcatttttgt aaattttacc tgtgtcattt
    16861 ttttaaaccc tattaatctt tagtagctgc tttgagcctt gccatggctt ttgcaagtgc
    16921 tatttgtgct ctggcgttgt ctatttcaac ctcgtgagag ccgattcttg cttctgctct
    16981 ttctttggcg gattttgcac gggttacgtc aatgtcagag ccgcattctg ccaaatctgt
    17041 cagtatcaaa gcttcgttgt ccttaaattg aaatattccg cccattgtgg tgaaatgttt
    17101 catttttcct tcaacatctg cccttgtaac accgatatca agagcagcca taaaaggctg
    17161 gtggtcgggc aaaataccga attcaccctc aacgctcttt gaataaacag cgtccacgcg
    17221 gtcattaaag acttcttttt cgtgtgttat aattttcagg tttatttttt ttgacattgt
    17281 tgtttacctt gtccttgacc ggctttgccg gggatcctga aacaaattca ggatgacagt
    17341 tatattattg ctaaacctcg gcttacgcgt ttttcatctc ttcagccttt gctattgctt
    17401 cttctattgt acctaccatg tagaaagcct gttcgggaag gtcatcgtgt ttgccttcga
    17461 gaatttcttt aaagcctttg atagaatctt caagttttac atatttaccc ggtatgccgg
    17521 agaactgctc tgcaacaaag aacggttgag aaag
//
LOCUS       DABS01000107            8655 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12780, whole genome shotgun sequence.
ACCESSION   DABS01000107 DABS01000000
VERSION     DABS01000107.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8655)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8655)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8655
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(64..1362)
                     /locus_tag="CPT85_04115"
     CDS             complement(64..1362)
                     /locus_tag="CPT85_04115"
                     /inference="COORDINATES: protein motif:HMM:PF03237.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="DAB24131.1"
                     /translation="MPIDWTKSKYSKKHRLFLSKKPEDMAFFTLCDGAVRSAKTLSII
                     YKIPQMFDFVGNEYLKVFSGYSKNTVRNNVLVELLPYLKNYHGAQVKFNSASGELDIK
                     LWGKLYNCLVVGGGKSDSDSNIQGATWDFWYANELPKHHYGFYNMALSRLTPENARAI
                     ADSNPESSNHWLYRERIKPFLEDDENIKSIFDYWHFTMEDNANLSKSFIQNQKKLYQG
                     VFEARKIKGLWVVAQGLVYDTFDIKKHTCAHKEIVEKIQKNEFVEYFLGLDWGWIHPL
                     SCGLYAITKDGKYYKIDELYGSXRINEDKVISWILDRQKEYGRYFRFINCDNARPEQN
                     HKLRQALNGIIVHEKKPKVIDSIGIVRSIINYDRLIVNKDRCKNTLREFGLYRYPNEQ
                     ERTDRFIDLDTPLKENDDTMDETRYALYFYETNYGYRFLR"
     assembly_gap    467..468
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1352..1750)
                     /locus_tag="CPT85_04120"
     CDS             complement(1352..1750)
                     /locus_tag="CPT85_04120"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24132.1"
                     /translation="MKKLSKAKYKKIEQECLSIVIENNLIFLDEIFIFSQILPSEFYE
                     AKLHESILIKDAIDINRAKLKRDLRLKWFDSTNATLNAALYKLVCTEDEKRALSASAA
                     SKNAASNDICTQEEYLKSLKEMGEAIENAD"
     gene            complement(1945..2541)
                     /locus_tag="CPT85_04125"
     CDS             complement(1945..2541)
                     /locus_tag="CPT85_04125"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24133.1"
                     /translation="MALKTVTKLFGVDDAKLFPVTEDSETKFTCGDGIDLPGVRQISV
                     TYEMEEKSLTGDEKVLEVSNKIKSVTFNMEYAKLSLEILAQLTGGSYTKTGSDDDEVG
                     TFSFGGGDLPNYFQLKAQILDTSNDGGDVHFCIYKAKATAIPINGVQDDFATLTFDGK
                     GVYTEHEFGVEGSKQTKLIDIEIHSKAKDLTATVDAGA"
     gene            complement(2551..2922)
                     /locus_tag="CPT85_04130"
     CDS             complement(2551..2922)
                     /locus_tag="CPT85_04130"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24134.1"
                     /translation="MILDDIKSFIVQNALADESVIKYDYDSAKGEDLLLLTLCDNIPC
                     DLAMRSRVRITVKFSDLKLTRDTCFALYNLLFPEDNFQKAIVVNGKTMHIKLNQGPYF
                     ADKDPSKRHGYVLDITVTYNR"
     gene            complement(2938..3246)
                     /locus_tag="CPT85_04135"
     CDS             complement(2938..3246)
                     /locus_tag="CPT85_04135"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24135.1"
                     /translation="MGYFTNLLTQRAVLKTVNGSDSDGRPNIIALDEIDCRIEFKHSL
                     TVNSQGQELTSSGRLYTESVVKVDDILEIKDKEFKVINVNPYYPLADSICAVNEVYFA
                     "
     gene            complement(3256..3720)
                     /locus_tag="CPT85_04140"
     CDS             complement(3256..3720)
                     /locus_tag="CPT85_04140"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24136.1"
                     /translation="MTLVLFQNSFVTLEEAEAYFDERFDSDKWTNPDSKPEDGVKEKL
                     LITASRKINRFDFVGKPLENDQPMAFPRDFELPQDIKDAVCEEAYSMLSKESSVHKKN
                     QESNISSISLGAGSISYNAPVSLNEDTLLDSSTALYLIKKWVKKGFFTNYIQ"
     gene            complement(3859..4809)
                     /locus_tag="CPT85_04145"
     CDS             complement(3859..4809)
                     /locus_tag="CPT85_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016298734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="DAB24137.1"
                     /translation="MAQDAKIISRTNAEALIPVETSNEIIKEVPKASAALQLFKQLPN
                     MSAKQKTLPIASTLPTAYFLNGDTDMKKTTNAEWDKLTLTAEEIAVIVPIPEAVFEDA
                     QYSMWDEIKPQIVEAFGVAIDDAVFFGVNKPTSYPDAIVTAAIAKNNKVEIGTNEDIA
                     GDIIGENGVMSLVEASGYKVTGFYADSTLEAKFRNLRDKNNQLLYTPGLTSEMPVSLV
                     GRPMVYDETGIFDATKALLIAGDFSKAVYSIRQDITYKVLDQAIIQNTDGSIAYNLAQ
                     QDMVALRCVMRLGVQVANPITRKGGSNRYPFAVLTPEASA"
     gene            complement(4849..5430)
                     /locus_tag="CPT85_04150"
     CDS             complement(4849..5430)
                     /locus_tag="CPT85_04150"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24138.1"
                     /translation="MSGTQDLNSTAQITVNTAQDGQSGIGSDFQTPAPEAEVEENEKE
                     LTPSQKMDALLRGNSTGQMKREIEKLRKEAAKYRTSSKAETQQKLEIKAKADEIQKEL
                     DALKKEHRNLSLIQKLDRAGCIKSELVAKDIPADIVTAEDLETFIEDYKENNKFLFKA
                     QKQNAGGTFKASGIKNLTPSQKMDAYIRAALGR"
     gene            complement(5640..6095)
                     /locus_tag="CPT85_04155"
     CDS             complement(5640..6095)
                     /locus_tag="CPT85_04155"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24139.1"
                     /translation="MAFDLPRACLHLEDSNSSSEASEILWNWILKRIRLSEAYAALHD
                     IYKKDCAAVFFDLNSDGENEILGTHYASARNGNGEWLLYVLQKDKNGKYKEITGDTVY
                     FDAKHPICILLKKTDGYRNFQVYSETKDDDVTYVYNKEKGLYYKKSVKN"
     gene            complement(6085..6594)
                     /locus_tag="CPT85_04160"
     CDS             complement(6085..6594)
                     /locus_tag="CPT85_04160"
                     /inference="COORDINATES: protein motif:HMM:PF07007.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="DAB24140.1"
                     /translation="MKKFLYFILVLGLTTGVTGAKEAFEHPVDIQESACKTGTQNLDE
                     WTKCTLKAARAWNSEVDKYYSLLYKKLSGDAKTALYDNQKYWNLYKNNEYKVIDSLQD
                     KNNDTKERAVFRAVQKRDLIKTRAKSLRLYYIQTFPDDEHEKIEINNNQSGFQLDPML
                     QRGLRWLGF"
     gene            complement(6694..7533)
                     /locus_tag="CPT85_04165"
     CDS             complement(6694..7533)
                     /locus_tag="CPT85_04165"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24141.1"
                     /translation="MKKSLNWGNVSMKSKDGAKYTRKRYKELIKKGFSPEEAEKMIYF
                     EIGISTVIRQGIESASAETCMAVGRLVGTEAGATIGAAGGSVQTVGIGSFTGGLIGAH
                     FGKFTCSKIIKGTSEFAIKRTSEHYAKSHKNFNDIYSEIDINYVSSYLENNTKNIADF
                     KPANAIKNTSQNKNMPLQGRVTKNVYVEKTTNTRKFDENKNYSDYINEITNSNKIYTK
                     EDIENMSDKELSDNKEAIDFQKKSIGIPTNKQAKASGMIFVSGYTRSDGIEVKSHYRA
                     HPA"
     gene            complement(7606..7911)
                     /locus_tag="CPT85_04170"
     CDS             complement(7606..7911)
                     /locus_tag="CPT85_04170"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24142.1"
                     /translation="MDKKLVKLIKEQEKQNFPQKIREKLSKKKGFFLINAVCIIIALI
                     IEFIISWIFKTDFNLDSLQILDKSDFEKSNEEALRPSSIIRTAIIITVCIIILIFAH"
     gene            complement(7980..8507)
                     /locus_tag="CPT85_04175"
     CDS             complement(7980..8507)
                     /locus_tag="CPT85_04175"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24143.1"
                     /translation="MQADAIAKHIETLTQFFYILTKTPPQAYGLDISGNMSGESLRKI
                     FIAALSKVDDIKQVSFTSTIQNVVSCAMALNSTPVKSVNIAWGEPIPADYSELVNTEN
                     SRVAAGTQSKLTTIMTLDNVSEEDAMAEMERMELERADKMSLKEALEQMKQENSKDFE
                     SDTDKVDDVQNNPII"
     assembly_gap    8510..8532
                     /estimated_length=23
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         2395 a         1701 c         1479 g         3055 t
ORIGIN      
        1 tatagcatat tttttttacc cgttcgggta aagtttttgt attgacaaaa taaataattc
       61 ctgctaacgc aaaaacctgt agccataatt ggtttcgtaa aaatacagag cgtatcgggt
      121 ttcatccatt gtgtcatcat tttcttttag cggtgtgtca aggtcaataa aacggtctgt
      181 acgctcttgc tcattaggat aacggtacaa accaaactct cttaatgtgt ttttgcacct
      241 gtctttgtta acaatcaacc tgtcataatt gataatagaa cgaacaattc ctatgctgtc
      301 aatgactttg ggcttctttt catgtacaat gattccattt aaagcctgcc ttagcttatg
      361 attctgttca gggcgtgcat tgtcacagtt aataaacctg aaataccgtc cgtattcttt
      421 ctgcctgtct aaaatccaac ttatgacttt gtcttcatta atacgannag aaccgtaaag
      481 ctcatctatt ttgtaatatt ttccgtcttt tgtaatagca tataatccac aggataaagg
      541 gtgaatccaa ccccagtcca agcccaggaa gtattcaaca aattcatttt tttgtatttt
      601 ttcaacaatc tctttgtgtg cacacgtgtg ctttttgata tcaaatgtat cgtaaactaa
      661 cccctgtgcc acaacccaca aaccttttat cttcctcgct tcaaatacac cctgataaag
      721 ctttttctgg ttttgtataa aagattttga aagattggca ttatcttcca tggtaaaatg
      781 ccagtagtca aaaatactct ttatgttttc atcatcttca agaaaaggct tgattctctc
      841 tctgtaaagc cagtggttcg aactttcggg gttgctgtct gcaattgctc gtgcattctc
      901 tggagtaaga cgcgataatg ccatgttgta aaatccataa tgatgcttgg gtagctcgtt
      961 agcataccaa aaatcccagg tggcaccttg tatattggag tcactgtctg atttcccccc
     1021 gcctacaaca aggcagttgt acaacttgcc ccagagcttt atatcgagct ctccgcttgc
     1081 agaattaaat ttaacctgtg ctccgtggta gttttttaaa tacggcaaaa gctcgaccag
     1141 cacattgtta cgcacagtgt tttttgaata acctgaaaaa actttcaaat actcattgcc
     1201 cacaaagtca aacatttgag gaattttgta aataatagaa agagtcttgg cagagcgcac
     1261 cgcaccgtcg catagagtga aaaatgccat atcttcgggc tttttgctca aaaacaacct
     1321 gtgcttttta ctgtatttag attttgtcca atcaatcggc attttcgatt gcttctccca
     1381 tttcttttaa actttttaaa tattcttctt gcgtgcaaat atcgttggat gctgcatttt
     1441 tggatgcagc agatgctgaa agtgcacgct tttcatcttc tgtacaaaca agcttgtata
     1501 acgcagcatt gagcgttgca ttggtgctgt caaaccattt taacctcaaa tcccttttta
     1561 attttgcacg gttaatgtct atagcatctt ttattaaaat agattcatga agttttgctt
     1621 cataaaattc tgatggcaaa atttgagaaa atatgaatat ttcgtcgaga aaaatcagat
     1681 tattttcaat tacaatgctc agacattcct gttcaatttt tttgtacttt gcttttgata
     1741 gttttttcat attccattcc taatttgtct gtgtacttac ttagtgattt tttaaaaatt
     1801 aaaaaaatcc agcataattt tattattatt acattcgtgc aataaaaaag ttatcatatt
     1861 ttccgtttcg atactttccc ccgaaaataa gtccaaagat gtaacaattg cacatcctcg
     1921 gactgcgggg ggaatatgta ttaactatgc acctgcatca acagtggcag taaggtcttt
     1981 ggcttttgaa tgtatttcaa tgtcaataag ctttgtttgt tttgaacctt caacaccaaa
     2041 ttcgtgctct gtgtaaacgc cttttccatc aaatgttaaa gttgcaaaat cgtcttgaac
     2101 accgtttata gggatggcag ttgcttttgc tttgtaaata caaaaatgca cgtcaccacc
     2161 gtcattgctg gtgtctaaaa tttgagcctt aagctggaag taattgggca aatctcctcc
     2221 gccaaaactg aatgtaccga cttcatcatc gtcagaacct gtttttgtgt aacttccgcc
     2281 tgtcagttgt gccaggatct ccaaactcaa tttggcatat tccatgttga aagtaacaga
     2341 cttaattttg tttgaaactt ccaatacttt ttcatcacct gtcaaagatt tttcttccat
     2401 ttcataagta actgaaatct gtcttacacc tggtaaatca atgccgtcac cacaggtgaa
     2461 ttttgtttcg gaatcttctg taacaggaaa taatttggcg tcatcaacgc cgaagagttt
     2521 tgttactgtc ttaagtgcca tttttttctc ctatctgttg taagtaactg taatatccaa
     2581 cacgtaaccg tgtctttttg acgggtcttt gtccgcaaaa taaggcccct gattaagctt
     2641 tatgtgcata gtttttccgt taacaacaat tgctttttga aaattgtctt ctggaaaaag
     2701 cagattgtac aaagcaaaac aggtgtctct tgtaagtttt aaatcagaaa atttgactgt
     2761 tattcttaca cgagagcgca ttgccaaatc gcacggaata ttgtcacaaa gcgtcaaaag
     2821 tagtaaatct tcgccttttg ccgagtcata atcatatttg attacactct catcagcgag
     2881 cgcattttgg acaatgaagc tttttatgtc atctaaaatc atttttttct cctgtaatta
     2941 agcaaaataa acctcattaa ccgcgcaaat agaatcggca agaggataat aaggatttac
     3001 attgataacc ttaaattctt tgtctttaat ttctaaaata tcgtccacct tcactacaga
     3061 ttctgtgtaa agacgtccgg aagatgtgag ctcctgccct tgtgaattaa cagttaatga
     3121 atgtttaaat tcaattctgc aatctatctc atctaatgca ataatattgg gtcttccgtc
     3181 actgtcagaa ccattcactg tctttaaaac agctctttgc gtgagcaaat tagtgaaata
     3241 ccccattttt cctccttatt gaatgtagtt tgtgaaaaag cctttcttaa cccatttttt
     3301 gattaaataa agcgctgtcg aagaatccaa cagtgtgtct tcatttaatg aaacaggcgc
     3361 attatatgat attgaacctg caccgagaga aatcgaagag atgttagact cctgattttt
     3421 cttgtgtaca cttgattcct tgctcaacat agagtaggcc tcttcgcaca ccgcatcttt
     3481 gatgtcctgc ggaagctcaa aatctcttgg aaaagccatt ggctggtcgt tttcaagagg
     3541 cttgcccaca aaatcaaaac gatttatttt tcggcttgca gtgattaaaa gcttttcctt
     3601 caccccgtct tcgggctttg agtcaggatt tgtccattta tctgaatcaa atcgctcatc
     3661 aaaataggcc tccgcctctt ctaaagtgac gaaggaattt tgaaacaata ctagtgtcat
     3721 agtttttccc tttctttgaa aatttatgtt taaatcctcg ttcctcccgt tattgctcta
     3781 aaacgaatga taaaaagggc aaacggcaca tcagtgccgc tgcccggata aatcgaatat
     3841 gcaaaacaaa tattttgact aagcagaagc ttccggtgtc aaaacagcga aaggataacg
     3901 gtttgaaccg ccttttcttg taatcgggtt agcaacttga acaccgagtc tcattacgca
     3961 gcgtaatgca accatgtctt gttgtgcaag gttgtacgct attgaaccgt cagtgttttg
     4021 gataatagct tgatcaagca ctttgtaagt gatgtcctgt ctgatagagt aaacagcttt
     4081 tgagaaatca ccggcaatca acaaagcttt tgttgcatca aaaatacctg tttcgtcata
     4141 aaccatagga cgtccaacaa ggcttacagg catttcagaa gttaaaccgg gtgtgtaaag
     4201 aagctggttg tttttgtcac gaaggtttct gaatttagct tctaatgtgc tgtcagcata
     4261 aaaacctgta actttgtaac cagaagcttc aaccaaagac ataacaccgt tttcaccaat
     4321 gatgtcaccg gcaatatctt cgtttgtacc gatttctact ttgttgtttt ttgcaattgc
     4381 tgcagtaaca attgcatcag gataagatgt aggtttgttt acaccgaaaa atactgcatc
     4441 atcaatagct acaccaaatg cttctacaat ttgaggcttg atttcatccc acatagaata
     4501 ttgtgcatct tcaaaaacag cttccggaat aggtactatt actgcaattt cttcagcagt
     4561 aagagttaat ttgtcccatt cagcgtttgt tgtttttttc atgtcagtgt cgccgttaag
     4621 aaagtatgct gtcggcaaag tggaagcaat aggaagagtc ttttgctttg cactcatgtt
     4681 tggtaattgt ttaaataact gcaatgcagc agaagcttta ggaacctctt tgataatttc
     4741 gtttgatgtt tcaacgggaa ttaatgcttc tgcatttgtg cgtgaaataa tttttgcatc
     4801 ttgtgccatt ttagaatttt tcctttctgt aatttaatac tgtcttaatc aacgccccaa
     4861 tgccgcccga atataggcat ccattttttg tgagggggtc agatttttta tgccggatgc
     4921 tttgaaagta cctccggcat tttgtttttg agctttgaaa agaaatttgt tgttttcttt
     4981 gtaatcttca ataaatgttt ccaaatcctc tgccgtaact atatcagcgg ggatatcttt
     5041 tgcaacaagc tcgcttttga tacatccggc tctgtcaagt ttttggatta aagaaagatt
     5101 acgatgttct tttttcagtg catcgagctc tttttgaatt tcatcagctt ttgctttaat
     5161 ctcgagcttt tgctgtgttt cggcttttga agacgtgcgg tattttgccg cttccttacg
     5221 aagtttttca atctctcttt tcatttgccc tgtcgaattt ccgcgaagaa gtgcatccat
     5281 cttttgtgat ggagtaagct ctttttcgtt ttcctcgact tcggcctccg gggccggtgt
     5341 ttgaaaatcg ctgccaatac ctgattggcc atcctgtgca gtatttactg taatctgcgc
     5401 agtagaatta aggtcctgtg tacctgacat aggaactcct ttcttttgtt gcggactgtg
     5461 taataaaaaa atgcctaaca gcccaggtgt agtgtgtaag ttaatgaata aaaaaaacgg
     5521 cattttgtta aaaatgccgt gcaaaatagc tggatcgatg caattgtcta tggacaactg
     5581 cgagtctaac tattatgcac gctaaaggtt gtaaaaaatt aatgtatttt ccgttttact
     5641 caatttttaa cagatttttt ataatacaaa cctttttctt tgttataaac gtaagttaca
     5701 tcatcatctt ttgtttcact gtaaacttga aaattcctgt aaccgtcagt ttttttcaaa
     5761 agaatacaaa taggatgttt ggcatcaaaa tataccgtat cacctgtaat ctctttgtat
     5821 ttgccattct tgtctttttg caaaacatac aaaagccact ctccattgcc gtttctggcg
     5881 ctggcatagt gtgtgccgag tatttcattt tctccatcag aattcaaatc aaaaaacaca
     5941 gccgcacaat cttttttgta aatatcatgc agcgctgcat acgcctccga caatcggata
     6001 cgttttaaaa tccagttcca cagaatttca gatgcttcac tgctgctgtt ggaatcttcc
     6061 aaatgcagac aagcacgcgg taaatcaaaa gccaagccag cgaaggccgc gctgaagcat
     6121 aggatcaagc tgaaaaccac tttgattatt gttgatttcg attttttcat gttcatcatc
     6181 ggggaaagtc tgtatatagt ataatctgag cgattttgct cgcgttttaa tcagatctct
     6241 tttttgtaca gcacgaaaaa cagctctctc ttttgtatcg ttgtttttgt cctgtagtga
     6301 atcaatcact ttgtattcgt tgtttttgta taaattccag tatttctggt tatcatacaa
     6361 ggcagtcttt gcatcaccgg agagcttttt atacaaaagt gaataatatt tatccacttc
     6421 gctgttccat gctcttgcag cttttagtgt acattttgtc cattcatcaa gattctgtgt
     6481 ccctgttttg caggcacttt cttgaatgtc aaccggatgt tcaaaggctt ctttagcgcc
     6541 tgtaacccct gtagtcagac ccaaaaccag aataaaatac aaaaattttt tcatacataa
     6601 atgatacagg attaaataat tgttcgcaag taatcgaatc ggcaatctta atcaatatcg
     6661 cccggccacc acctctttct ttaatgaatt tttctaagca ggatgtgctc tgtaatgact
     6721 tttcacttct attccgtcag atctggtata gcctgaaaca aatatcattc cggaagcttt
     6781 tgcctgcttg tttgtaggaa taccaattga ttttttttga aaatcaattg cttctttgtt
     6841 gtcactcaat tctttatcag acatattttc aatgtcttct tttgtataaa ttttgttaga
     6901 atttgttatt tcgttaatgt agtcgctgta gtttttgttc tcatcaaatt ttcgggtgtt
     6961 tgttgttttt tcaacgtaaa cattttttgt cactctgcct tgaaggggca tatttttatt
     7021 ttgtgatgta ttcttaatag catttgcagg tttaaagtct gcaatgtttt ttgtattgtt
     7081 ttccaaataa gatgaaacat aatttatatc aatttccgaa tatatatcgt taaagttttt
     7141 gtggcttttt gcataatgtt cagaggttct ttttattgca aattcacttg tgcctttgat
     7201 tattttgcta caagtaaact tgccaaaatg ggcaccaatt aatcctcctg taaaagagcc
     7261 tatgcctaca gtttgcacag aacctccggc agctccgatt gttgcacctg cttctgttcc
     7321 aacaagacgt cctactgcca tgcacgtttc ggcagaggca ctttctatcc cctgccttat
     7381 aacagtactt atacctattt caaaataaat cattttttct gcctcttcag gagaaaagcc
     7441 cttttttatt agctctttat agcgttttct ggtatatttg gcaccgtctt ttgatttcat
     7501 tgaaacattg ccccagttta aacttttctt caaaatttct cctttctaaa aaacacagac
     7561 agattactta tctgcctgtg ttaaattagt ctgtattttg taatattaat gagcaaaaat
     7621 taatataatg atacacacag ttattataat ggctgttcta ataatggaag aaggtctaag
     7681 cgcctcttcg ttcgattttt caaaatctga tttgtccaat atttgcaaag agtctaggtt
     7741 aaaatccgtt ttgaatatcc aggagattat aaactctata ataagagcga ttattataca
     7801 caccgcatta ataagaaaaa atcctttctt tttagaaagt ttttctctta ttttttgtgg
     7861 aaaattttgt ttttcctgtt cttttataag ttttaccagc tttttgtcca tatatttatt
     7921 tttgcataga tttttttcaa aaagttatca tatttgccgt ttgactacaa aaattaatat
     7981 taaataattg ggttattctg aacatcatcc actttatctg tgtctgattc aaaatctttg
     8041 ctattttctt gtttcatttg ttccagagct tctttcaatg acattttgtc tgctctttcc
     8101 agctccattc tttccatctc tgccattgca tcttcttctg atacattgtc caaagtcata
     8161 atagttgtca acttgctttg agtgccggct gcaactctgc tgttttcagt gttaacaagc
     8221 tctgaatagt cagccggaat tggttcaccc caggcaatgt ttacactttt aacaggtgtt
     8281 gaatttaaag ccatagcaca gcttacaacg ttttgtatcg tagatgtaaa cgaaacctgc
     8341 tttatgtcat ccactttgga aagtgcagca ataaatattt ttctcaaact ttcacccgac
     8401 atgttgcctg aaatatccaa gccgtaagct tgaggaggcg tttttgtcag aatgtagaaa
     8461 aattgagtaa gagtttcaat gtgctttgca atggcatcag cttgcaaatn nnnnnnnnnn
     8521 nnnnnnnnnn nntttcaaaa agtcggaatc agggaagatt ctttcattgg tgataggatt
     8581 catctccaga ttctgctcac tgcctgccaa cttaggattt gcatggcggt tgattatctt
     8641 agaattctgg cttat
//
LOCUS       DABS01000108            6839 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13769, whole genome shotgun sequence.
ACCESSION   DABS01000108 DABS01000000
VERSION     DABS01000108.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6839)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6839)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6839
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            217..768
                     /locus_tag="CPT85_04180"
     CDS             217..768
                     /locus_tag="CPT85_04180"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24008.1"
                     /translation="MSTKSKAIVNLKSSEKVANFLESNHLHKKDFAEMIGVTLSYVYN
                     LIDSAIPFSTRGITLERIATVMDVEPEEFVEYKIPQEPILMDESIEFLKEKQKEKGIS
                     TVQLLKSFPRKKRVEIVDILRGARPIPLDWKELXLDINKEEIYPYWEERTRQLFQNAG
                     MNLQANQGLVDAMFDCARNYVDK"
     assembly_gap    623..624
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(774..>1098)
                     /locus_tag="CPT85_04185"
     CDS             complement(774..>1098)
                     /locus_tag="CPT85_04185"
                     /inference="COORDINATES: protein motif:HMM:PF12631.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="DAB24014.1"
                     /translation="NPEALNISSKTGYNIEELKEKIKEAVLDKNSLETEFVTNQRQQE
                     CLTNAKNALTNALFAAQNGELQDLISIDIKAALLSLEXLDEITGEVITDEILENIFEH
                     FCIGK"
     assembly_gap    853..854
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1099..1145
                     /estimated_length=47
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<1146..>1981)
                     /gene="trmE"
                     /locus_tag="CPT85_04190"
     CDS             complement(<1146..>1981)
                     /gene="trmE"
                     /locus_tag="CPT85_04190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00450"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="DAB24015.1"
                     /translation="FSKKELQPGRICHGWIIDNEKKIDEVIVLPFKNPNSYTGEDVIE
                     IQCHGGPKVVKQILDLTLKNGARLAQKGEFTKRAFLNKKLDLSQAEAVLDIIHAKTSN
                     FAQKSANNLSGALAQQIKQIKDSLFTLYSRIIAAVDFPEDVKEPEYSYLIEECQKNIS
                     NIERILKNANASNIMRQGIKIAIAGCPNAGKSSLFNALLNIERAIVTEIPGTTRDVIQ
                     ESVDIDGIPATLIDTAGIRDNEEVDKVEAIGIEYTKNCVENADLILFLFDWSKGFDEN
                     DA"
     assembly_gap    1982..2016
                     /estimated_length=35
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2213..3886
                     /locus_tag="CPT85_04195"
     CDS             2213..3886
                     /locus_tag="CPT85_04195"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24009.1"
                     /translation="MLLTPVNLFLQRQTTLKNTAKSANQTSVTAPMPYDSVSFGKKLS
                     NEETTAIFNNYNPVVKDFDSYHVPVHNKDIARRLQKSYTEKSFHDMFKYVKKHGTFDI
                     NLDPETKFVQTSIIDKKENPLMSKLVWVTDTSNFMPLLKDTNPDLCVPLMENISGYYA
                     KQQSSFDKIINNPLLFELNHDWPNTAKNGVGHVFNPENKITHKWYPRTRLDSIGLYLG
                     TMSDLIKDGLQGSKYGYKKAADISQNAIESIANTTAYLNKIVYPYAKDTGPWEEKTFN
                     STASSDVAIINDAFRKVIDLMYSPTKDKELLKVRTRLLNAKNGSIFKDEQGLRNMLKI
                     GEHRIKTNSAWEFPTQRKRDGAMSFIFKTEKLDEDVINNAIKVFARLKKFEKPTPKNK
                     ELVRDNGILRYTGDNYLYINADLDFEKNVYIPNRKFPDRTEAQWFMVSDMSKAYGMIA
                     KSLMDYIAKGGKSNAAKNLLQYAMQKETEYINRSYARITGKNSYKANAKPCPAFKVPE
                     AYQAVTDAKGKIKFVPGTHTPLTWAQASLYDASKLFEQNLKRYPEIIKS"
     gene            complement(4148..4891)
                     /locus_tag="CPT85_04200"
     CDS             complement(4148..4891)
                     /locus_tag="CPT85_04200"
                     /inference="COORDINATES: protein motif:HMM:PF00899.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24010.1"
                     /translation="MADFSRNELIWGKETQKLLKDKTVFVFGLGGVGGFALESLARAG
                     VQNFTVVDFDCVSPSNINRQIIALTSTIGCKKTDLFEKRLKDINPDINLTCVCDFYNE
                     NLRDDIFKTKPDYVIDAIDTMRSKIDLLVYCKQNNISVITSMGAGNRLDPTQLYITDI
                     KDIENKKCTFTKNVLYQLKKHGIEEGITAVCSRECPSVLERISSKENIETKNGEKIEF
                     TKITPGSTPFVPAVAGYFMGYQVLKDFLS"
     gene            complement(4902..5225)
                     /locus_tag="CPT85_04205"
     CDS             complement(4902..5225)
                     /locus_tag="CPT85_04205"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24011.1"
                     /translation="MNNRRWYDKHRETRVALDLLKNLHSTIQSKLSNDIINVASAIKT
                     VHRENDTAPLSIGLERVLGLYQTNKGRRWYDKQPDLSVAIKTISTLPESDYENIMEGI
                     CMSLK"
     gene            5332..5601
                     /locus_tag="CPT85_04210"
     CDS             5332..5601
                     /locus_tag="CPT85_04210"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24012.1"
                     /translation="MEIILFITGLVLGAVVTFFVMKNIQQKQQAAVESAYSDIYEKMQ
                     LQFENLSNKIFKETTQDFSNMSKERITEILEPFKEKFEELKXIQY"
     assembly_gap    5588..5589
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5621..6436
                     /locus_tag="CPT85_04215"
     CDS             5621..6436
                     /locus_tag="CPT85_04215"
                     /inference="COORDINATES: protein motif:HMM:PF02646.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24013.1"
                     /translation="MHIKEVIETGAKISNDTNTLASALKGDNMKQGRWGELILEKVLE
                     LSGLRKGEEYDTQTGFGSKKPDATIFLPDNKAVFIDAKTSLASYDAYINAQNEDEAQF
                     ALKQFKDSVKTHISGLAKREYFEIEEFASPEYVLMFIPVESCYAMLFAENGELWELAW
                     KNKIMPVSPSTLLAALKIINSFNMVNRQNKNAQEIAGLAGKMIDKFADMVKDLNGVQT
                     NLSKAMTKLMGRDNVIRQCERLTELGAKNAKQIPEPCVVDDALKNHNQPALIE"
     gene            complement(6437..6754)
                     /locus_tag="CPT85_04220"
     CDS             complement(6437..6754)
                     /locus_tag="CPT85_04220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018293507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24016.1"
                     /translation="MEEIKTRLKIKTDEDYYNEFFNRFKSGKSGGAGRASSKLTKETA
                     IDTLNKYIEGDKLKADSTKAQIKAAYRRLALKYHPDTCKEADKAAYEEIFKEIGEAYG
                     ALR"
BASE COUNT         2213 a         1202 c         1222 g         2114 t
ORIGIN      
        1 aatttatatt tatcgccagg attgcccagc cctgtaataa gtttcattgt tgtactctct
       61 ttataaatgg tgttttaagt ttataaataa ataagattgc ccctattgtt tcgtcctgat
      121 taccaataac aaaaagttcg aatcagttta tcaatataat ataaaattta gaacattttc
      181 aaaatacttt atatatttta gggacggagg agactaatgt caaccaagag taaagccata
      241 gtgaatctta aaagcagtga aaaggttgct aattttttag aatccaatca cttgcataaa
      301 aaagattttg cagagatgat aggcgttact ctctcttatg tttacaatct gatagacagt
      361 gccatacctt tttccacaag ggggataaca ttagagagaa ttgctactgt aatggatgta
      421 gagcctgaag aatttgtaga atacaaaatt cctcaggagc ctattcttat ggatgaatcc
      481 atagagtttt taaaagaaaa acaaaaggaa aaaggaattt ctactgttca gcttttaaag
      541 agttttccca ggaaaaaacg ggtagaaatt gttgatatct tacgaggggc aagacctata
      601 ccgcttgatt ggaaagagct ttnnttggat atcaacaagg aagaaattta cccgtactgg
      661 gaagaaagaa caagacagct gtttcaaaac gcaggaatga accttcaggc aaatcaaggc
      721 cttgttgatg caatgtttga ctgcgcaaga aactatgtgg acaaataaaa ctattatttt
      781 cctatacaaa aatgctcaaa tatattttcc aagatttcat cggtgataac ctcaccggtg
      841 atttcgtcta atnnctctaa tgaaagcaat gcagctttta tatctataga aatcaaatcc
      901 tgcaattccc cgttttgggc ggcaaaaaga gcatttgtca gggcattttt tgcatttgtc
      961 aggcattctt gctggcgctg gttggttaca aattctgttt ccaatgaatt tttatcaagc
     1021 acagcttctt ttattttttc ttttaactct tctatattgt agccggtctt ggaagaaatg
     1081 tttaaagcct ccgggtttnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1141 nnnnnaagca tcattttcgt caaaaccttt gctccaatca aaaaggaaaa ggatgaggtc
     1201 agcattttcc acacaatttt ttgtgtattc aataccaata gcctctacct tgtctacctc
     1261 ttcgttgtct cttattccgg ctgtatcaat gagagtagcc ggtatgccgt cgatgtcaac
     1321 agattcttga ataacgtctc tggttgtccc agggatttcc gtaacaatgg ctctttctat
     1381 atttagcaga gcattaaata aagaagattt ccctgcattg gggcagcctg ctatggcaat
     1441 ttttatgcct tgacgcatta tgtttgaagc attggcattt tttaaaattc tttcaatatt
     1501 actgatattt ttttgacact cttctatcag ataagaatat tcaggttctt ttacgtcttc
     1561 cggaaagtca actgcagcaa tgattctaga atagagagta aaaagagaat cttttatttg
     1621 tttgatttgt tgagcaagag cgcctgatag attgttagca cttttttgtg caaagtttga
     1681 tgtttttgca tggataatat caagcacggc ctcggcttga gacaaatcaa gttttttgtt
     1741 taaaaaggct ctttttgtga attctccttt ttgtgcaaga cgcgcaccgt tttttagtgt
     1801 taaatcaagg atttgtttta cgacttttgg cccgccatgg cattgtattt ctataacgtc
     1861 ttcgcctgta tagctgtttg gatttttaaa aggcaaaaca ataacttcat cgattttttt
     1921 ttcgttatca attatccagc cgtgacaaat tctgcccggt tgcaattctt tttttgaaaa
     1981 tnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnncaac gcctcctgca ccaagggggg
     2041 tagctattgc agagattgtt tcaaattcat aatttatatt cataacttga tagtagtatc
     2101 aacaggtatg tttttcaatt attgtttaat attgtaaata aatttaagac tgactggcaa
     2161 aaaatatctt attccaactt aaaataaaaa aaaagagaaa gagtagggat ttatgttatt
     2221 aacaccggtt aatttatttt tgcaaaggca aacaacttta aaaaacaccg caaaatctgc
     2281 aaatcaaaca agtgttacag ctccaatgcc atatgacagt gtttctttcg gcaaaaaatt
     2341 atcaaatgaa gaaactacag caatttttaa caattacaat cctgttgtaa aagactttga
     2401 ttcttatcat gtgcctgttc acaataaaga tatcgctcgc agattacaaa aaagctatac
     2461 tgaaaaatcc tttcatgata tgtttaaata cgtaaaaaaa cacggtactt ttgacataaa
     2521 cttagaccct gaaacaaaat ttgtacaaac cagcataatc gacaaaaaag aaaaccctct
     2581 tatgtcaaaa ttggtctggg ttacagacac aagcaatttt atgccgcttt taaaagatac
     2641 aaatcctgat ttgtgtgtac ctttgatgga aaatatatca ggttattatg caaagcagca
     2701 gagctctttt gacaaaataa tcaacaaccc gctgcttttt gaactaaacc acgactggcc
     2761 taatacagca aaaaacggtg tgggacacgt atttaacccc gaaaataaaa taacccacaa
     2821 atggtatcca agaacaaggc tcgattccat tggtttgtat ttaggcacaa tgtcagacct
     2881 tatcaaagac ggtttacaag gctcaaaata cggttacaaa aaagcagccg atatatccca
     2941 aaatgctatt gaatccattg caaacacaac agcttattta aacaaaattg tataccccta
     3001 tgcaaaagat acaggaccat gggaagaaaa aacattcaac tcaacagcct caagcgatgt
     3061 tgcaattatc aatgacgcgt ttagaaaagt tattgattta atgtattctc caacaaagga
     3121 taaagagctt ttaaaagtac gcacccgttt attaaatgcc aaaaacggca gtatttttaa
     3181 agacgagcaa ggactgcgaa atatgctcaa aataggtgaa cacagaatca aaacaaacag
     3241 cgcgtgggaa tttccaacac aaagaaaacg cgacggtgca atgagtttca tatttaaaac
     3301 agaaaaactt gatgaagatg ttataaataa cgcaataaag gtttttgcaa gactgaaaaa
     3361 atttgaaaaa ccaacaccaa agaacaaaga acttgtaaga gataatggta ttttaagata
     3421 cacgggtgat aattatttat atataaatgc tgaccttgat tttgagaaaa acgtatacat
     3481 tccaaaccgt aaattccctg acagaacaga ggcccagtgg tttatggtca gcgatatgtc
     3541 aaaagcttac ggaatgatag caaaaagcct gatggactat atagccaaag gaggaaaaag
     3601 caacgctgca aaaaaccttt tgcaatatgc aatgcaaaaa gaaaccgaat acataaacag
     3661 aagctatgca agaattacag gaaaaaattc atacaaagcc aacgcaaaac cctgccctgc
     3721 atttaaggtt ccggaagcat atcaggcagt aacggatgca aaaggaaaaa taaaatttgt
     3781 acccggtaca catactccgt taacctgggc acaggcatcc ttgtatgacg cgtcaaaact
     3841 ttttgaacaa aatctaaaaa gatatcctga aatcatcaaa agctaaaccc ttgcaataaa
     3901 agggtttgca caaaaacatt aagaaatatt acaaataatt gtctttttta aacaaaaaag
     3961 gcaattattt cttatggaaa tactttatat atatacgaga gataaaaaga gatttaaaga
     4021 gagatttaat ttttaaacac atacatacac actgacctac cacactaacc tacacttact
     4081 tacacacacg aggaatcaaa caagattcaa ccgggattca ttatggattc cggttttttt
     4141 tattttttta tgataaaaaa tcttttagaa cctgatatcc cataaaatat ccggcaacag
     4201 ctgggacaaa aggtgtggaa cccggggtta tttttgtaaa ctcaatcttt tcgccgtttt
     4261 tggtttctat attttctttt gaagagattc tttccaacac agacgggcac tctctgctgc
     4321 aaacagctgt aattccttct tctatcccgt gtttttttag ttgatacagc acattttttg
     4381 taaaagtaca ttttttattt tctatgtctt ttatatccgt aatataaagc tgtgttgggt
     4441 caaggcggtt gcctgcaccc attgaagtaa taacagaaat attattttgt ttgcaataca
     4501 caagcaaatc tatttttgag cgcatagtgt ctattgcgtc tattacatag tcaggttttg
     4561 ttttaaatat atcatctcga agattttcat tataaaagtc gcacacacag gtaagattta
     4621 tgtctggatt gatgtctttt agtctttttt caaacaagtc tgtttttttg catccgattg
     4681 tggaagtgag tgcaataatc tggcggttga tattggatgg ggaaacgcag tcaaagtcta
     4741 caacagtgaa attctgcacg cccgcccttg caagagattc cagcgcaaac cctccaacac
     4801 cgccaagacc gaagacaaag actgttttat ctttgagcag tttttgtgtt tcttttcccc
     4861 agatgagttc atttcgtgaa aaatctgcca tgatttttcg cctattttag tgacatacag
     4921 ataccttcca tgatattttc ataatcactt tcaggtaatg tcgaaattgt cttgattgca
     4981 acagaaaggt ccggctgttt gtcgtaccag cgacggcctt tgtttgtttg atagaggccc
     5041 agcactcttt caagccctat gctcaaaggt gctgtatcat tttctctgtg cactgttttt
     5101 attgcactgg caacgtttat aatatcgttt gaaagtttgc tttgtattgt tgagtgcaga
     5161 ttttttaaca ggtctaaagc aacccttgtt tctctgtgtt tgtcatacca gcgtctatta
     5221 ttcacgttcc tgcctccagt caataatatt aatattatat tgtttttttt acaaaataca
     5281 actctgttac attgttatgc tagtatataa ttatcaaaac gggagatatt tatggaaatt
     5341 attttgttta taacaggttt ggttttagga gcggttgtta ctttttttgt tatgaaaaat
     5401 atacagcaaa aacaacaggc tgctgtagag tctgcttatt cagatattta tgaaaaaatg
     5461 cagctgcagt ttgaaaacct gtcaaacaaa atttttaaag aaacgactca ggatttttcc
     5521 aacatgtcga aggaaagaat cactgaaatt ttagaaccgt ttaaggaaaa atttgaagag
     5581 ctgaaaanna tacaatattg aacagggtgc aaaacttgat atgcacatta aagaggttat
     5641 tgaaacaggt gcaaaaatct ctaacgacac aaatactctt gcctctgcac taaaaggcga
     5701 caacatgaaa cagggtagat ggggcgagct tattcttgaa aaagtgcttg agctttcggg
     5761 tcttagaaaa ggcgaggagt atgacactca aactggattc ggctccaaaa agcctgatgc
     5821 aactattttt ctgccggata acaaggctgt atttattgac gcaaaaacat ctcttgcctc
     5881 ttatgatgcc tatataaatg cacaaaacga agacgaagca caatttgccc tgaaacagtt
     5941 caaagattct gtaaaaacgc acatatcagg actggcaaag cgtgagtatt ttgaaataga
     6001 agagtttgct tcacccgagt atgtattgat gtttataccg gttgagagct gctatgcaat
     6061 gctttttgct gaaaatggag agctctggga gcttgcgtgg aaaaacaaaa tcatgcctgt
     6121 gtctccgtca acgcttcttg cagcattaaa aatcattaac agttttaata tggtcaaccg
     6181 ccagaacaaa aacgcacagg aaattgccgg tcttgcagga aagatgatag acaaatttgc
     6241 agacatggta aaagacctta acggtgtaca aacaaacctg tcaaaagcta tgacaaagct
     6301 catgggcaga gacaatgtaa taagacagtg cgaaaggttg acagagcttg gtgccaaaaa
     6361 tgccaagcag attcccgagc cgtgtgtggt tgatgatgct ttgaagaatc ataatcaacc
     6421 cgcgctaatt gaatgattat ctcaacgcgc cgtaagcttc gccgatttct ttaaagattt
     6481 cttcgtaggc agctttgtca gcttctttac aagtatctgg gtgatattta agagcaagac
     6541 gtctgtatgc ggctttgatt tgcgcttttg tagagtcagc tttcaattta tcgccttcta
     6601 tgtatttgtt aagagtgtct atagccgttt cttttgtgag tttagaagaa gctctgcctg
     6661 caccgcctga ttttccgctt ttgaatctgt taaagaattc attataatag tcttcatccg
     6721 ttttgatttt tagacgagtt tttatttctt ccattttggt tttaagtgca tttattgtat
     6781 tttcagaaag tccgtagggt ttttcaagga ttctttctat tgcactatac attgttgtc
//
LOCUS       DABS01000109            7534 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_4439, whole genome shotgun sequence.
ACCESSION   DABS01000109 DABS01000000
VERSION     DABS01000109.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7534)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7534)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7534
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(4..603)
                     /locus_tag="CPT85_04225"
     CDS             complement(4..603)
                     /locus_tag="CPT85_04225"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23996.1"
                     /translation="MPDYGEIVLYELDKKDIPFLMDMLKNIRLEKLAPNEGNLSQKNE
                     WKYLIKKAAGGLKRAENVYLTAYKNKPCGIMSFMPFFDNELCYVSYTATWPYKTGENV
                     KCAGQVLFRHVFEYAKSVKKGVCLVLDDKAPDGKKSNKVFYRKLGFEKVDQPKPELKI
                     LPNKQTKGVIKDILDTVIDYRPSGDGKELRLEKVLDINY"
     gene            complement(731..1090)
                     /locus_tag="CPT85_04230"
     CDS             complement(731..1090)
                     /locus_tag="CPT85_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006780167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="DAB23997.1"
                     /translation="MKTKKQTKTKPQDCPIEELFSLIGNKWKVLILRDLLEGSRRFGE
                     LKQATGASQKSLTSKLREMEDAGLVERKVFPEVPPRVEYTLTDIGYSLAPVLDSMAQW
                     GTDYREYCRLKDKLNNR"
     gene            complement(1134..2930)
                     /locus_tag="CPT85_04235"
     CDS             complement(1134..2930)
                     /locus_tag="CPT85_04235"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23998.1"
                     /translation="MEKFIEFSKKYCLKELGIITIVSLIMYFIFYGKQDVYLVDVSRE
                     AYIPWQMLKGKVLYKDIFNVYGPLGYQINAIAYALLGVKLNTLYLMGFLNSLVICFTT
                     FFISKLFVDKKTSLCISGLTMFVCVYAKNFFNFIFVYSYNAVYALSGFLLSLLFALLF
                     LRDKKTSQLLCAFLFAGFSFANKIEDLPYFVFLFLCLPVFVKFNEEGAFKKYLFAFFA
                     FMLFPVISFGVLVLQGVSLSDFISSFDFIQKLVKAPVTTYFYYNFGLYFNPYIVADVL
                     HSVWTILKTLVPCAVVLYGLNLFVNRYAQNKFVKAVCNFAVFMVMLFVCAKSYNLLKI
                     NYSTIFAWAGMAVCVILKVFVLVLVYRFFKYKKLKEQRDIASNQDKMFLFLVISALAV
                     SFKGLCDVTITCYGTFTLAALFIPLVIFFAKYVPDYAKYLDKTGLCKTLQNLCIMIMM
                     GFFFFGIDRITDGQLYKLAQPTGTLFIKKVYPMQNDMISYIREYTPKDAVVLTVPEGA
                     IVNFLAQRDTHNMFYYLIPVNVQIFGEDFILKNIEKNPPDYFLYNTLVYSVYGVGHFC
                     SYAPKVCDFMDKNYYVQRMWKGPVTFILYKHK"
     gene            2994..3782
                     /locus_tag="CPT85_04240"
     CDS             2994..3782
                     /locus_tag="CPT85_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007015713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="DAB23999.1"
                     /translation="MINNKKIAVIMPAYNAEKTLEQTYNELYKDIVDEIILVDDNSSD
                     KTKEVAKKLGITTLVHDKNKGYGGNQKTCYTAALKTDADIVIMVHPDYQYTPKLVPAM
                     ATMLAFDEYDACIASRFIGKGALEGGMPLYKFIANKCLTLFQNLMMGERLTEYHTGFR
                     AFTKEVLEKCPLKDCDDDFVFDNEMLALIFYKGYTIGQISCPTKYFPDASSINFMRSC
                     KYGFGVLKTSILFALAKWGIYKSKIFRNDAKTLDKNEELPYFEG"
     gene            complement(3824..6037)
                     /locus_tag="CPT85_04245"
     CDS             complement(3824..6037)
                     /locus_tag="CPT85_04245"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24000.1"
                     /translation="MLGNINLFLNKLSVEEIAKLDTNKDGQISNEEAEGSLFQFKDRF
                     SDAEYLSLTGSAKPVEQQPAANVPTTSSEVPETAKNAVELRTYFTKMKDSFIETYVAG
                     LLESGELEESGKKSLIFYINTNARTYIEDYIKNNVKTPYDTSEVYAGFETYIAEKLEE
                     RKAAQAAVDTQLTDAVNNTDANYEKLTEATKKADTEYITSEEYAEIKGIATDYILGIM
                     AGGLENDEFDAFMSALNPEYKNDTNYKVAQKALELLQTETDPIKMQEIINNAKTAIGN
                     LIGDMDEYGDGTTPLSEAVKTRAKFIDNKKYSEQLDAYIDDSIEARTHEPNPELFDPE
                     ARLERLNALKTAFLSQYEGDGTDLETEFAAFVEKSDKELENVYAKEDVLTESDTKNYE
                     KVKETLEAAGQYANAEEKDAIFDAAADYVMADMIQGTTDNLLASINSQYVYFPQYIEA
                     KSLIDNLKTSATPEADYTKAKELIKELLASQGVDKIEKFVEIEETKNVNLSVTEITQG
                     LWGYGTTETHGGDNLVGTHFTIQNGKVVWTNDTDNKDINKMYDQLRQRIHTQMKEQLG
                     DSYNAEEIDKYFDQAIVNVAMNLENPTGLHSIEELANNAVVYFNAIATAGVHGQETNK
                     VSNNKIDMTQILVETGKIDNYCSGIIGRGKLWISGKYVCVKNALYGIITPIMNKMQEQ
                     LGDNFDKVEITRILQTAVDATVKSSSIESETYDVYQYFFKQVNTLYNDYLSQKGY"
     gene            6224..6811
                     /gene="lexA"
                     /locus_tag="CPT85_04250"
     CDS             6224..6811
                     /gene="lexA"
                     /locus_tag="CPT85_04250"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="DAB24001.1"
                     /translation="MLNLNLSEKQKNFFENLKKAYGKEPLPSFEKIAQAFGFKHKNSV
                     WQYFNKLKECDLIIEKNGKFIINPDCFGAILFTSSVRAGFATVAEDSIEKRVSLDENF
                     DLDNPSVFMFTVSGDSMVNAGIFDGDKVIVKKTPYAKNGDIVLAFIDNGYTLKTYRQK
                     DGKVWLQPENPEYPIIEPKESLTIFGVATGIARQL"
     gene            6983..>7534
                     /locus_tag="CPT85_04255"
     CDS             6983..>7534
                     /locus_tag="CPT85_04255"
                     /inference="COORDINATES: protein motif:HMM:PF00817.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB24002.1"
                     /translation="MAEIALVDCNNFFVSCEQLMNPALKDRPVCVLSNNDGCIIARSK
                     EAKAIGIPMGYPLFKAQKEFKNVIYISRNFGLYHDVSNRVMTKLLSYTPDVEQYSIDE
                     AFLDLTGLKKLFRCSYRDIIAKIKNEIETEIGIPVSIGLAPTKTLAKLACEKAKKDKS
                     LNGIHRIHYREIDDILKKTYIEDI"
BASE COUNT         2380 a         1505 c         1296 g         2353 t
ORIGIN      
        1 acactaataa tttatatcca ggactttttc cagccttagc tctttgccgt cgcctgaggg
       61 cctgtaatct ataaccgtat caaggatatc ttttataaca ccttttgttt gcttgtttgg
      121 caaaattttt agctctggct ttggctgatc tactttttca aaccccaatt tacgatagaa
      181 taccttgttg cttttctttc catcaggtgc tttgtcatca agcaccagac agactccttt
      241 tttgacagac tttgcatatt caaaaacatg cctgaacaaa acctgaccgg cacattttac
      301 attttctccg gttttgtatg gccaggttgc agtgtaagaa acatagcaaa gctcgttatc
      361 aaaaaacggc ataaaagaca ttatcccgca cggcttgttt ttatacgctg tcaaataaac
      421 attttcagca cgttttagcc cgcctgctgc ttttttaatc aggtatttcc attcattttt
      481 ttgtgaaagg tttccctcgt taggtgcaag cttttcgagc ctgatgttct ttagcatgtc
      541 cattaaaaac ggaatatcct tcttatcaag ctcgtacaaa actatctcgc cataatcggg
      601 catagatttc acaattgctc ttgcgcgctc aataccctta aagcaaggcg gtttgacgtt
      661 atttacggaa ttttgcgggg tttgaatatt catatatgaa taagttaaag cgggtgaaag
      721 aatttttttg ctacctgttg tttaacttat cttttaagcg gcaatattcc ctgtaatcag
      781 taccccattg agccatagaa tccaacacag gcgcaagcga atagccaata tctgtaagag
      841 tatactcaac tcttggcggg acttccggaa acaccttcct ttcaacaagg cctgcgtctt
      901 ccatctcgcg caattttgat gtaagtgatt tttgagaagc ccctgttgcc tgtttaagct
      961 cgccaaaacg tcttgaaccc tccagcaaat cccttaatat cagcactttc cacttgtttc
     1021 caataagaga aaaaagctct tctatggggc aatcctgtgg ttttgttttt gtttgttttt
     1081 tcgtcttcat tactcaattt tactttatta gtatcaaatt gcaaccattg tttttatttg
     1141 tgtttataca atataaaggt cacagggcct ttccacattc tttgtacata ataatttttg
     1201 tccataaaat cacacacttt aggtgcataa gagcaaaaat gaccgacccc gtaaaccgaa
     1261 taaacaagcg tgttgtaaag aaaataatcg gggggatttt tttcgatatt tttcaaaata
     1321 aaatcctcgc caaatatctg cacattaaca ggtatcaggt aataaaacat gttatgagta
     1381 tctctttgcg caagaaaatt gacaattgcc ccttccggaa cagtaagcac aacagcatct
     1441 ttaggagtat attctctgat gtagcttatc atgtcatttt gcattggata aacttttttt
     1501 ataaacagcg tgccggttgg ctgtgcgagt ttataaagct gtccgtcggt tattctgtcg
     1561 attccaaaga aaaagaaccc catcataatc ataatgcaaa ggttttgaag ggttttacac
     1621 aatcctgttt tatcgagata ttttgcataa tccggcacat actttgcaaa gaaaataacc
     1681 agcggtataa acaaagccgc taaagtaaaa gtgccgtaac acgtgattgt gacatcacaa
     1741 agccctttaa aagaaacagc cagagccgaa ataaccagaa acaaaaacat tttatcctga
     1801 ttagaagcaa tatcgcgctg ctcttttaat tttttgtact taaaaaatct gtaaaccaaa
     1861 acaagcacaa acactttcaa aataacgcaa acagccatgc ctgcccaggc aaaaatcgtt
     1921 gaatagttaa tttttagcaa gttgtaggat tttgcacaaa caaaaagcat aaccataaac
     1981 accgcaaaat tacacacggc tttgacaaat ttattttgcg catagcggtt aacaaacaaa
     2041 ttcaacccgt acaaaacaac cgcacacggc acaagagttt tcagaattgt ccacacggaa
     2101 tgcaaaacat ccgcaacaat ataagggtta aaatacaacc cgaaattgta ataaaaataa
     2161 gttgtaacag gagctttaac aagtttttga ataaaatcaa aactgctgat aaaatcactc
     2221 aaactcacgc cctgcaaaac aagcacacca aaagatatta caggaaaaag cataaacgcg
     2281 aaaaaagcaa aaagatattt tttaaatgca ccttcctcat taaatttgac aaacacgggc
     2341 agacacaaaa acaaaaatac aaaataaggt aaatcctcaa tcttgtttgc aaaagaaaaa
     2401 cccgcaaaca aaaacgcaca caaaagctgc gatgtttttt tgtcccttaa aaaaagcaaa
     2461 gcaaacaaca atgaaagcaa aaagcccgac agagcataaa cagcattgta tgagtataca
     2521 aaaataaagt taaaaaagtt ttttgcatac acacacacaa acatcgtcaa accgctaatg
     2581 caaagcgatg tttttttatc aacaaagagt ttggaaataa aaaacgtggt aaaacaaatc
     2641 acaagagaat tcaaaaagcc cattaaataa agcgtgttga gctttacccc caaaagtgca
     2701 tacgcaatgg cgtttatttg ataccccaaa ggcccgtaaa cattaaaaat atctttgtat
     2761 aaaaccttgc ctttgagcat ctgccagggg atataagcct ctctgctcac atccacaaga
     2821 tagacatcct gttttccgta aaaaataaaa tacattatca aagaaactat tgttattatt
     2881 ccaagctctt tgaggcagta ttttttagaa aattctataa acttttccat acaaattgta
     2941 ttctccctct cttttgatta tactataagt taaataataa cgaggagtta aggatgatta
     3001 ataataaaaa aattgctgtt atcatgcctg catacaacgc agaaaaaaca cttgaacaaa
     3061 catacaatga gctttataaa gacatagtgg atgaaattat tcttgtggat gacaactcct
     3121 cggacaaaac aaaagaagtt gcaaaaaaac tgggcataac aacccttgtg catgataaaa
     3181 acaaaggata cggcggaaac cagaaaacct gctacacagc agcgctcaaa acagatgcag
     3241 atatcgtgat aatggtacac ccagactatc agtacacccc gaaactcgta cccgcaatgg
     3301 caacaatgct tgcttttgac gagtatgacg cgtgtattgc atctcgcttt atcggcaaag
     3361 gtgcgctgga aggcggaatg cctttataca agtttattgc aaataaatgc ctgacacttt
     3421 ttcaaaacct catgatgggc gaacgtttga cagaatacca cacgggtttt cgtgcattta
     3481 caaaagaagt gcttgaaaaa tgcccgctaa aagactgcga tgacgatttt gtttttgaca
     3541 acgaaatgct tgcgctcatt ttttacaaag gctacacaat aggccagata agctgcccca
     3601 caaaatactt ccccgatgct tcctcaatca actttatgag aagctgcaaa tacggtttcg
     3661 gggttttgaa aacaagtatt ctgtttgcac tggcaaaatg gggtatttat aaatcaaaaa
     3721 tatttagaaa cgatgccaaa acactggata aaaacgaaga attaccgtat tttgaaggat
     3781 aaaaaaggga ggcaagcctc ccctttttta ttcagacgtt tatttaatag cctttttgac
     3841 taagatagtc attatacaag gtgtttacct gtttgaagaa atattgatat acatcgtaag
     3901 tttcgctttc aatgcttgat gatttcactg ttgcatctac agcagtttga agaattcttg
     3961 tgatttcaac tttatcaaag ttatcaccta attgttcctg cattttattc attattggcg
     4021 tgattatgcc atataatgca tttttaacac atacatattt gcctgatatc cacaatttgc
     4081 cgcgaccaat aattccgctg cagtagttat cgatttttcc ggtttctaca agtatttgag
     4141 tcatatcaat tttattatta gacactttat ttgtttcctg tccgtgaact cctgctgttg
     4201 ctattgcatt gaaataaacc actgcattgt ttgcaagctc ttctatagag tgtaatcctg
     4261 taggattttc cagattcatt gctacattaa caatagcttg atcaaagtat ttatcaattt
     4321 cttctgcatt gtagctgtca cctagctgct ctttcatttg tgtatggatt ctttgtctga
     4381 gctgatcata cattttgtta atgtctttgt tatctgtatc gtttgtccac acaacttttc
     4441 cattttgaat agtaaagtgt gtgcctacca gattgtcacc gccgtgagtt tctgttgtgc
     4501 cgtaacccca caagccttga gtaatttcag taacagaaag gttaacattt tttgtttctt
     4561 caatttcaac aaatttttca attttatcaa caccctgtga agcaagaagc tctttgatga
     4621 gttcttttgc ttttgtgtag tctgcttccg gagttgctga cgttttgagg ttatcaatca
     4681 aagattttgc ttcgatatac tgcgggaagt aaacgtattg agagttgata gaagcaagaa
     4741 ggttgtcagt tgtaccctgt atcatatcag ccattacata atcagctgct gcatcaaaga
     4801 ttgcgtcttt ttcttctgca ttagcatact ggcctgctgc ttcaagagtt tctttaactt
     4861 tttcataatt ttttgtatca gattctgtta aaacatcttc ttttgcgtaa acattttcaa
     4921 gctctttgtc agatttttca acaaaagctg caaattctgt ttcaaggtca gtgccgtcac
     4981 cttcgtactg gcttaggaat gctgttttga gtgcatttaa tctttcgagc cttgcttcag
     5041 ggtcaaataa ttctgggttt ggctcatgtg ttcttgcttc aattgaatca tcaatgtatg
     5101 cgtcaagctg ctcactatat tttttgttgt caataaattt agctcttgtt ttaacagctt
     5161 cgctcaaagg agttgtgcca tcgccgtatt cgtccatgtc tccgataaga ttgcctatgg
     5221 ctgtctttgc attgttgatt atttcctgca ttttgatagg gtcagtctct gtctggagca
     5281 gctcaagagc tttttgtgcc actttgtaat ttgtgtcatt tttatattca gggttcaaag
     5341 cagacataaa tgcgtcaaac tcatcgtttt ccagaccgcc tgccattatt ccgaggatgt
     5401 agtctgttgc aataccttta atttcagcat actcttcaga tgtaatgtat tcagtgtctg
     5461 ctttttttgt agcttctgtg agtttttcat aatttgcatc agtgttgttc actgcgtctg
     5521 tcaattgcgt atcaacagct gcttgtgcgg cttttctttc ttcgagtttt tctgcaatgt
     5581 aagtttcaaa acctgcataa acttcacttg tatcgtaagg agttttcacg ttatttttaa
     5641 tgtaatcttc aatataggtt cttgcatttg tgttgatgta aaaaataagt gattttttgc
     5701 cgctttcttc aagctcgccg ctttctaaaa gacctgcaac atatgtttcg ataaagctgt
     5761 ctttcatttt tgtaaaatat gttctcaatt ccacagcatt tttagcagtt tcaggaactt
     5821 ctgatgaagt tgtgggaaca ttagctgcgg gctgctgttc aacaggtttg gcagaacctg
     5881 tcaaagataa atattcagca tctgaaaatc tgtctttgaa ctggaataaa gaaccttcag
     5941 cctcttcatt agaaatctgt ccgtctttgt ttgtgtctaa ttttgcgatt tcttccactg
     6001 acagtttgtt caaaaataaa ttaatgtttc ctaacataac ctactcctta ttgcttaaac
     6061 cttttccctt gcttgtaatc atgtactcgg catttgtttt tataaacttt agacttttta
     6121 gacttcaatt ttacatttct tcacaatcag gtgttcaaac ccttttttta aagcaaaaaa
     6181 aatacatgtt gacatattat agacatttgt ctataatgta attatgttga atctgaatct
     6241 aagcgagaag caaaaaaact tttttgaaaa cctcaaaaaa gcatacggga aagaacctct
     6301 tccgagtttt gaaaaaatag cacaggcttt cgggtttaag cacaaaaatt ctgtctggca
     6361 gtattttaat aaactcaaag agtgtgactt aatcatagaa aaaaacggaa agttcatcat
     6421 aaatccggac tgtttcgggg cgattctttt tacatcatct gtcagagcag gctttgcaac
     6481 tgttgccgaa gactcgatag aaaaaagagt ttcgcttgac gaaaactttg atttggacaa
     6541 cccgtcagta tttatgttca cagtgtcggg cgactcgatg gtcaacgcag gtatttttga
     6601 cggagacaaa gtcatagtca aaaaaacacc gtacgcaaaa aacggagaca ttgtacttgc
     6661 gtttatagac aacggctata cgctcaaaac ctacagacaa aaagacggaa aagtctggct
     6721 ccagcccgaa aatcccgaat acccgattat cgagccaaaa gaatctttga ctatcttcgg
     6781 tgtggcaaca gggattgcaa gacagctgta atacttttaa aaatgaaaac ttatcaactc
     6841 tagatatcct tcctaataaa atcaaaaaag cgggggtctc atgttaataa attgcagatc
     6901 acaaattaga taagggatat acatcccccg ctttattttc tttcctcaac aaaatgaata
     6961 tacattaata aggtaatgca caatggcaga gatagcactt gtagattgca acaacttttt
     7021 tgtatcgtgc gagcagctca tgaaccccgc actcaaagac cggcctgttt gcgttttgag
     7081 caacaacgac ggctgtatta ttgcccgctc aaaagaagca aaagcaatag gcatcccaat
     7141 ggggtatccg ctttttaaag cacaaaaaga gttcaaaaac gtaatttata tctcaagaaa
     7201 cttcggcctg tatcacgatg tgtcaaaccg cgttatgaca aagctcttga gctacacgcc
     7261 ggatgtggag cagtattcaa tagacgaggc ttttttggat ttgactggac taaaaaaact
     7321 ctttcgctgc tcttaccgcg atataattgc aaaaataaaa aacgaaatag aaaccgaaat
     7381 aggcataccc gtgtccatag ggcttgctcc gacaaaaacc cttgcaaagc ttgcctgtga
     7441 aaaggccaaa aaagacaaat ctctaaacgg catacacaga atacactata gagaaataga
     7501 cgacattctc aaaaaaacct atatagaaga catc
//
LOCUS       DABS01000110           13617 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_5707, whole genome shotgun sequence.
ACCESSION   DABS01000110 DABS01000000
VERSION     DABS01000110.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 13617)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 13617)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13617
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..5668
                     /locus_tag="CPT85_04260"
     CDS             <1..5668
                     /locus_tag="CPT85_04260"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23977.1"
                     /translation="KDKKTVVLAEMLNDIVVNTDNSEIPNTKAINQKHHGMCAAISIA
                     RKLMSYEYKPGYVDTILSELDNTDNIMVYDLEHLGQGKKIPVPKITIDYNAAQNKGYR
                     IVDAATMQWMNIADMSGLDNKPVGIYTAFDQEHFASFEDTHYPLRLEQADLQAKHTYY
                     QVLVKAKDNIDRAKLEKLKKQINYSDAQNRLDSDIKTAQDITASLKTKLGQVLSSLSD
                     KELHSTISNLYSLQVKTSAKIPQIKDGLQNYRFIPNEEESIKERKIKAYLTDTFNNKI
                     NSKALDSNITDIKDLILMHNSLSMQISPENTLPDKIRFDRRLFDAAAAYRTSKIFALH
                     DKDTRADYMIHYNIVDTEKFLVDNIEKSIQHIAKTGDKRYINHFAKTYGVATEKDTIV
                     EVLQDVKQTVEEALTEELDGFYQRLGLDNRIYALAGEIKTIKNAVQEGDKDELKSIAL
                     TMGMKPDKNKVIAKLSEYENILENNCNEKQYTEIFNKVGLKNRLEAFADSFNIMADAM
                     DAPQDAFNSAIIKEFNLCNGLDENADIIDSKKALFQLSEDFNKFSFFITMLRNQMEIT
                     DDNGNIINSADVGELILKYLENDNIIISQKELAALQKRYDAIDKIRSSDEFSSRSGKI
                     SDPSLYKYTPSEKITLQKINKSINAMAASTNKELNFVFSKIKKPMEEQARQIGVNTGR
                     YWVQRGGSSGLHSMQQSRILQQLTDKPYYEENDLGKAVNIIKNTPHSGVSCTSVFHDK
                     PGWHAQYIAEIANKNGKDILFHDNSWGPSEKENIWIDSEGMTRTDYKDSRGGELGYIT
                     DSKWRNGNYTNNLFYKTGHNKPERINSRIIKKLSDIDAKEDYKFGLMSDIILNGVSQK
                     AAEIAAGIKDTIFLPDYYYINDMEKAASTLSLSKIKSVKAMQEAYMKKYMAEKDQLDA
                     RLEKTPFNKGISSQQEFDALPDNDPVKVTFEKAAIKLSTSYLSYWQQMGKINSFEELQ
                     KIRQQQKADARANFNYAFAKDPQILLAYALNRNKNHVIEILNKTLKNNNIKISEDLKV
                     KIIENSAVYTKDRLADFDGSLKNTVNFFVNNIIRQFYANVPKNLNSSKAAMQLKQYLE
                     KDINEALYFNKKDLLKDTPLNNAIRKYIDKKFNPATDEEFVQIYRKLQDMTTAEFNAA
                     TADAQNSDMAYKDLNAYDVLKLYTASNPKVTGIVSNIIYQKNFLNLLDMSEYEDSFQY
                     KKLEKKPRGAHYKGTRTFDDLYFSFDNSLDALDAQKLFNKYKDKNYREYGVFPAYPKI
                     NSINDKIIDKKIDVLETSINQVSKFVQDLKINLYVYEATHRIEDFLNTLDDNKKLNKK
                     EFAVLNTMLGEFITIMHNDINISQSVEAAESMIELPPSSFAKEYKNLFQQWKKEVDAV
                     ENINPKDMLLSNIETNIKGLKEGFKVSINSDIPVRYRNILFTDLNNWLNEKLKSDIPY
                     YDRLLERREIENKLSSYGNDNCDENIKTDFLNNLHIYINAIKRELAGLSKVQNPDKKT
                     LERHQKIKTAFEKQKEQLEQIINDYSQKYIDPLYSQAFETTLKEYISHSFKQSKKAPY
                     NDEKEDMLFERFRSDYLKYHVLNNPKDILDRFVALCAKDGEIACAKDEDQKRRLNFEK
                     QVCKDYLDTALCLASRAEIQDLLMRAAELGNTAMVFSKFKNYDTGLVDTDKGTILTMA
                     DDESIDFMVRNLVLSNDYSTAVLFIEKLGLSEKFLNFENKKLSIKDAKKLIDKMADIL
                     VTTNLQNKIITEETAKLDESFENSDDYVQRIDNVKKAIIKRAKGLGRRNNLSCVLEKL
                     DGAKDMIALNPDIAKSVFINEMLSDALDNIGRMANEDIAKIQTSLDEYTTLYNLIQKI
                     DTTTNAKSTQLKEELIAKFDEIMKYNNQKLTGAAQGSDDIEISYED"
     gene            5754..6404
                     /locus_tag="CPT85_04265"
     CDS             5754..6404
                     /locus_tag="CPT85_04265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010294830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="DAB23978.1"
                     /translation="MKKIISAQEAISFIKEGSTVMVGGFLECGAPDILVDELVNQNIG
                     NLTMISNDTTYPHADKGKLIVNKQIKKLITSHIGTNPETGKQMHSGELDVELVPMGTL
                     IEKIRAKGTGLGGVLTPTGVGTVLEENKKTMEIDGKTFIFEKPLGADFALIYGTKVDK
                     FGNVSYYGTTRNLNTIMATAADTVIVQADELVDCLDPNEVVIPGLFVDYIVVKEDN"
     gene            6405..7148
                     /locus_tag="CPT85_04270"
     CDS             6405..7148
                     /locus_tag="CPT85_04270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005946895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-CoA--3-ketoacid-CoA transferase"
                     /protein_id="DAB23979.1"
                     /translation="MELTAQKTIEKELNSKVVTDPISAAHKELSKEKIREIIAKRAAK
                     EFKEGDVVTLGIGLPTAVANYVPENMHVIFQSENGLLGVGKDQQKDNLDKRIINAGGG
                     FVEAKYGACFYDSQMAFTMMRGGHIDATVLGALQVDEEGSLASWVIPGKMVPGMGGSM
                     DLVVGAKKVIIAMEHTSKGQIKIVDKCTLPLTAYKEVDMIITERCVFKVSDCGLVLTE
                     INPLFTIEDIRACTTAHFSVSDHLKFMDV"
     gene            complement(7135..7596)
                     /locus_tag="CPT85_04275"
     CDS             complement(7135..7596)
                     /locus_tag="CPT85_04275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_350035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="DAB23980.1"
                     /translation="MIIKEILCDKKKYLDLLLIGDEQESMILKYLDKSRIFGLYDPEL
                     KAICAVEHMPDKSEKVVEIKNIAVYPKYHHKGYGTKLLQHILSLYKSEADKILVGTGE
                     NEQTLRFYKKQGFMYSHTLKNFFIQNYDHPIYENGKQLVDMIYLSINLKHP"
     gene            7668..8895
                     /locus_tag="CPT85_04280"
                     /pseudo
     CDS             7668..8895
                     /locus_tag="CPT85_04280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004223884.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     assembly_gap    7775..7776
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    9495..9496
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            9519..9704
                     /locus_tag="CPT85_04285"
     CDS             9519..9704
                     /locus_tag="CPT85_04285"
                     /inference="COORDINATES: protein motif:HMM:PF00580.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23983.1"
                     /translation="MFVDEYQDIDEKQYKLIKLLADNDANLCAIGDPNQAIYGFRGGD
                     SKFFNNFSQDYPNVXXY"
     assembly_gap    9695..9696
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            10016..10599
                     /locus_tag="CPT85_04290"
                     /pseudo
     CDS             10016..10599
                     /locus_tag="CPT85_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_193440.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    10316..10317
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(10596..12122)
                     /locus_tag="CPT85_04295"
     CDS             complement(10596..12122)
                     /locus_tag="CPT85_04295"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23981.1"
                     /translation="MAISAIHGTTLRNHXXVKNTRPANNYAYVTFQHQSNDTFVKQKH
                     SNISFKGYDRAAAQQFIEQIEQSKAKHLARGWQCEFYKINDEIGIKAPKPLHPEYQNA
                     DFNGYGNVKEFFALKKINEISPDIAVTPYEIINKNGKNYLVEEVLTGGHPYKTQLTKG
                     HVTDILNKAFTLDTNGIVNNDLQGGNIILTGKDKTKFIDFGSFSILENSGHYINSDIR
                     PAEQYQNGTIANLVNSTKEGRFMATFYSDYQPDFLMRSDNKFLKMDSNATVFEYRTIY
                     DYLKTGHDEKPKDFFSNYLKIKSEQYHGKMIEFLESLKLSKTDKAQLDMRKNAVEQEK
                     IFKEVFANPSENVMKAELGKMQLKWLVLCHGDQQHKTFSYFQDYLNMINTLEQNAQGT
                     EKKYFASLKERISALNFEHEVFKGRELADDENLIKIIFENVKAKAKETINKATQDIIE
                     IIEKPSPIPPEKAGGKKTAALLGLTGILAAGSVYAYKNINEKKQKQPELKPRVLAQSA
                     "
     assembly_gap    12077..12078
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            12281..13516
                     /locus_tag="CPT85_04300"
     CDS             12281..13516
                     /locus_tag="CPT85_04300"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23982.1"
                     /translation="MYIGAIQQYNSSPSFKSGRTTLYTDFDGTFMPFSHEDVCNNDCF
                     NKQNDFYRMHGGIDYFFSRFKDKVKLIITTGRSKNEYDYFVKNLEQKNLYIHKPQALI
                     TRDGSSRYNCTNNEIKEDTVRNNPIKESINLKDINFLSNNIKKIVKRIYPSAYIVEPG
                     VNKNRHEYGHKSLEYVLDKSDFDDKNSYISISEPEPLVIEMAVSKKYDVNSIAKSIKD
                     FVDANNIKVSVNAFEDDPFNFLPIYTTNGKQYKKADTIIIKPLIEGSEITKLYDVKNE
                     IRKNIENNTNDFVVAAGDGFNDEPMLNPLNYLDLYGVKIDKNKSIQEILSDNDTLEAL
                     KKLPFCAIVCSNEKALDNIRKIGQILDSKGIYKVKSTDNPREFLLKNLKQAINDYGET
                     NDEFMFSLGPDLYCSLFDN"
BASE COUNT         4874 a         2278 c         2454 g         4001 t
ORIGIN      
        1 taaagacaaa aaaactgttg tgctggctga aatgttaaac gatattgtag taaataccga
       61 taattccgaa atacctaata ctaaagcaat aaaccagaaa caccacggta tgtgcgctgc
      121 aatttctatt gccagaaaat taatgtctta tgaatacaaa ccgggttatg tagatacaat
      181 actttcggaa ttggataata cagacaacat aatggtctat gatctggagc atctagggca
      241 aggtaaaaaa attcctgttc ccaaaataac aatagattat aatgctgcac aaaataaagg
      301 atacagaata gtcgatgctg ctacaatgca gtggatgaat attgctgata tgtcaggtct
      361 ggacaataaa cctgtgggga tttatacagc atttgaccag gaacattttg cttcgtttga
      421 agacactcac tatccgctca ggctggaaca agctgattta caggccaaac acacttatta
      481 tcaggtactt gtaaaagcca aagataatat tgacagggcc aagcttgaaa aattgaaaaa
      541 gcagataaac tattccgatg ctcaaaatcg ccttgattct gatattaaaa cagcacagga
      601 tataactgca agtttgaaga caaaacttgg tcaagttttg tcttctttat ctgataaaga
      661 gcttcatagc actatatcaa acttatattc actacaggta aaaacatcag ctaaaattcc
      721 gcagataaaa gacggacttc aaaattacag atttattcca aatgaagaag aatcaataaa
      781 agaacgtaaa atcaaagctt atcttacaga taccttcaat aataaaatta attcaaaagc
      841 gcttgattca aatatcacag atattaaaga tttgatattg atgcataatt cactatcaat
      901 gcaaattagt ccggaaaata ccctgcctga taaaatcaga tttgacagaa ggctgtttga
      961 tgctgcagca gcttatcgta caagcaaaat atttgctctg catgataaag ataccagagc
     1021 tgattatatg attcattaca atattgtgga taccgaaaaa tttcttgtgg acaacataga
     1081 aaaatctatt caacacattg ctaaaacggg tgataaaaga tacatcaatc attttgcaaa
     1141 aacatacgga gttgcaactg agaaagatac aattgttgaa gtgctccaag atgtaaaaca
     1201 aactgttgaa gaagcattga cagaagaact ggatggtttc tatcaaagac tcggtcttga
     1261 taacagaata tacgcacttg ccggtgaaat aaaaaccata aaaaatgcag tgcaagaagg
     1321 tgataaagac gaactaaaat caattgctct tacaatgggc atgaaacctg acaaaaataa
     1381 ggtaatagca aaactaagcg aatatgaaaa tattcttgaa aataactgta atgaaaaaca
     1441 atatacagaa atttttaata aagtaggcct gaaaaacaga ctggaagctt ttgctgattc
     1501 attcaatata atggcagacg caatggatgc cccccaggat gctttcaaca gcgctataat
     1561 aaaagagttt aatctttgca acgggctgga cgaaaatgca gatatcattg attctaaaaa
     1621 agctcttttt caattgtccg aagattttaa caagttttcg ttctttataa caatgcttag
     1681 aaaccagatg gaaataacag atgataacgg aaatatcata aacagcgcag acgtaggtga
     1741 gttgatatta aaatatctgg aaaacgacaa tataattatt tctcaaaaag agcttgctgc
     1801 tttgcaaaaa agatatgatg caattgataa aattcgttct tctgacgagt tttcatccag
     1861 atccggtaag atatcagacc cttcattgta taaatacacg ccttctgaaa agataacact
     1921 gcaaaaaatt aacaaatcaa ttaatgcaat ggccgcttct accaataagg aattaaattt
     1981 tgttttcagt aaaattaaaa aaccgatgga agaacaggcc agacaaatag gtgtaaacac
     2041 aggccgttat tgggtgcagc gcggaggctc ttccggtctt cactcaatgc agcagtcaag
     2101 aatattacag cagctgacag acaaacctta ttatgaagaa aatgaccttg gaaaagctgt
     2161 aaatataatc aagaacaccc ctcattccgg cgtttcatgc accagtgtgt tccatgacaa
     2221 accgggctgg cacgctcaat atattgcaga aatagcaaac aaaaacggca aagatatact
     2281 cttccatgat aacagctggg ggccttcgga aaaagaaaat atctggattg attcagaagg
     2341 catgacaaga actgattata aagattcaag aggcggtgag ctgggataca taacagattc
     2401 gaaatggaga aacggtaact acacaaacaa tctgttctac aaaacaggac acaacaaacc
     2461 tgaaagaatt aattcacgta taatcaaaaa actatcggat atagatgcca aagaagatta
     2521 caaattcggc cttatgtcag atattatact gaatggagtt tcacaaaaag ctgctgaaat
     2581 agctgctgga attaaagata ctatattttt gccggattat tattatataa atgatatgga
     2641 aaaagcagcg tcaactcttt ctttaagcaa aataaaatct gttaaagcaa tgcaagaagc
     2701 ctatatgaaa aaatatatgg cagaaaaaga ccagcttgac gcaagacttg aaaaaactcc
     2761 ttttaataaa ggcattagct cacaacaaga atttgatgca ttgcctgata acgatcctgt
     2821 aaaagtaaca ttcgaaaaag ctgcaatcaa actttctacc agttatttgt cctactggca
     2881 gcaaatgggt aaaatcaaca gttttgaaga gctacaaaaa ataagacaac aacaaaaggc
     2941 agacgcccgt gcaaacttca actatgcttt tgcaaaagac ccgcagatac ttttagcata
     3001 tgccttaaac agaaataaaa atcacgttat tgaaattctt aataagacat taaaaaataa
     3061 taatataaaa atttccgaag acctaaaggt taagataata gaaaatagcg cagtttacac
     3121 aaaagacaga cttgccgatt ttgacggaag tcttaaaaac actgttaact tctttgttaa
     3181 caacataatc agacagtttt atgctaatgt gcctaaaaat cttaactctt caaaagcagc
     3241 aatgcagctg aaacaatatc ttgaaaaaga tatcaatgaa gccttgtatt tcaataaaaa
     3301 agatctttta aaggatacac ctttaaacaa tgcgatcaga aagtatatag ataaaaagtt
     3361 taatcctgca actgatgaag aatttgtcca aatttacaga aagcttcagg atatgacaac
     3421 tgctgaattt aatgcagcga cagccgatgc tcaaaattcc gatatggcgt ataaagattt
     3481 aaatgcctat gatgttttaa aactttatac tgcttcaaac ccgaaagtaa caggcattgt
     3541 ttcaaatatt atttatcaaa agaacttttt aaaccttctt gatatgtctg aatatgaaga
     3601 ttctttccag tataaaaaac tcgagaaaaa accaagaggt gctcactata aaggcacaag
     3661 aacatttgat gatttgtatt tttcttttga taattcatta gatgcccttg atgctcaaaa
     3721 actgtttaac aaatacaaag ataaaaacta tagggaatac ggcgtgttcc ctgcttatcc
     3781 taaaattaac agcataaacg ataaaattat agacaaaaaa attgatgttt tggaaacttc
     3841 aataaatcag gtatcaaaat ttgttcagga tttgaaaata aacctctacg tttatgaggc
     3901 aacacacaga atagaagact tcttaaacac tcttgatgat aataaaaaac tgaacaaaaa
     3961 agagtttgcg gtattgaata caatgcttgg cgaatttatt actataatgc ataatgatat
     4021 caatatttct cagtctgttg aagcagcaga gtctatgata gagctcccgc cttcttcttt
     4081 tgcaaaggaa tataaaaatt tattccaaca atggaaaaaa gaagtcgatg ctgttgaaaa
     4141 cattaaccct aaagatatgc tgttaagcaa tatcgaaact aacattaagg gtctgaaaga
     4201 aggatttaaa gtctcaatta actcagatat acctgtcaga tacagaaata ttttgttcac
     4261 tgatttgaat aactggttga atgaaaagct caaatcagac attccttatt atgacaggct
     4321 gctagaaaga agagagattg aaaataaact ctcatcttat ggcaatgaca attgtgatga
     4381 aaatatcaaa acagactttt taaacaattt gcatatttat ataaatgcaa taaaaagaga
     4441 gcttgcaggt ctttctaagg tacaaaaccc tgataaaaag actttagagc ggcatcaaaa
     4501 aataaaaaca gcttttgaaa aacaaaaaga acagctggaa caaattatca atgattattc
     4561 tcaaaaatat atcgaccctc tatactcaca ggcttttgaa actacgttga aagagtatat
     4621 ttcgcatagc tttaaacagt ctaaaaaagc accttataat gacgaaaaag aagatatgct
     4681 ttttgaaaga ttcagaagtg attatctaaa ataccatgtt ctaaacaatc caaaagacat
     4741 ccttgatagg tttgtagctc tttgtgcaaa agatggcgaa attgcctgtg caaaagatga
     4801 agatcagaaa cgaagactga actttgagaa acaggtttgt aaagattacc tagatactgc
     4861 tttgtgcctt gcttctcgtg cggaaataca ggatttgctt atgagagcag ccgagcttgg
     4921 caacacggct atggtgtttt caaaattcaa aaactatgac acaggtcttg ttgatacgga
     4981 caaaggcaca attttgacaa tggcagatga tgaatcaatc gattttatgg taagaaacct
     5041 tgtgctatca aatgattatt ccactgctgt tctttttata gaaaaactgg gacttagcga
     5101 aaaattcttg aattttgaaa ataaaaaact cagcattaaa gatgcaaaaa aattgataga
     5161 taaaatggca gatattctgg ttacaacaaa cttgcaaaat aaaattatca cggaagaaac
     5221 agcaaaactt gatgagtctt ttgaaaacag tgatgattat gtacaacgca tagacaatgt
     5281 taaaaaagca attatcaaaa gagctaaagg cctgggaaga agaaataacc tttcctgtgt
     5341 actggaaaag cttgacggtg caaaagatat gattgcgctc aatcctgaca ttgcaaaaag
     5401 tgtatttata aacgagatgc tttcagatgc gctcgacaat atcggcagaa tggcaaatga
     5461 agatattgct aaaatacaaa cttcgcttga tgaatacaca actttgtata atttgattca
     5521 aaaaattgat acaacgacta atgcaaaatc aacacagctt aaagaagaac ttatagccaa
     5581 atttgatgaa ataatgaaat ataacaacca aaaacttacc ggcgctgctc aaggttctga
     5641 tgatatagaa atttcctacg aagattagtt ataaatatta aaagtgaaga aatatgttag
     5701 atttttacaa aataaatatt tataataaaa ttgagaaaaa ggactgaatg cgtatgaaaa
     5761 agattatatc agcccaggaa gcaataagtt ttataaaaga aggctcaacc gtaatggtcg
     5821 gcggtttttt ggagtgcgga gccccggata ttttggttga tgaacttgtt aatcaaaata
     5881 tcggcaatct cacaatgata tctaacgata caacctatcc tcacgctgat aagggaaagc
     5941 ttattgtaaa taaacagata aaaaaactaa ttacctcaca cattggtact aatcctgaga
     6001 caggcaagca aatgcattcc ggagagttgg atgttgagct ggtgcctatg ggtacgttga
     6061 ttgaaaaaat cagagccaaa ggaacagggc ttggcggtgt tttgaccccg acaggcgttg
     6121 gcacggtgct tgaagaaaat aaaaaaacaa tggaaatcga tggaaaaaca tttatcttcg
     6181 aaaaaccgct gggtgctgat tttgcattga tttacggtac aaaagtggat aaattcggca
     6241 atgtttctta ctacggcaca accagaaacc ttaacacaat catggcaact gctgccgata
     6301 cagtgattgt tcaagccgat gaactcgttg actgtttaga ccccaatgaa gttgttatac
     6361 cggggctttt tgtggattat attgttgtaa aggaagacaa ttaaatggaa ttgactgcac
     6421 aaaaaacaat tgaaaaagaa ttaaactcaa aagtcgttac agaccctatt tcagcagcgc
     6481 acaaagagct gtcaaaagaa aaaatcagag aaattattgc aaaaagagct gcaaaagagt
     6541 ttaaagaagg cgatgtagtc actcttggta tcggccttcc cactgctgtt gcaaattatg
     6601 ttcctgaaaa tatgcatgtt attttccaat cagaaaacgg acttttaggt gttggaaaag
     6661 atcaacaaaa agataatctt gataaaagaa tcatcaacgc aggcggtggc tttgtagaag
     6721 ctaaatacgg tgcttgtttt tatgactcgc aaatggcgtt tactatgatg agaggcggcc
     6781 atatagacgc tacggtatta ggagctctgc aggtggatga agaaggcagc ctcgcaagct
     6841 gggttattcc cggtaaaatg gttcctggca tgggcgggtc tatggacctt gttgtaggag
     6901 caaaaaaagt tattattgcc atggaacata catcaaaagg ccagataaaa attgtggata
     6961 aatgtactct tcctcttact gcatacaaag aggttgatat gattataaca gagcgttgtg
     7021 tttttaaagt tagtgattgc ggacttgttc tgacagaaat taaccctttg tttaccattg
     7081 aagatataag agcttgcaca accgctcatt tttcagtaag tgaccatctg aaatttatgg
     7141 atgtttaaga ttaattgata aatatatcat atctacaagt tgtttcccgt tttcgtagat
     7201 agggtggtcg taattttgta taaaaaagtt ttttaatgtg tgtgaataca tgaaaccctg
     7261 ctttttataa aagcgtagtg tttgttcatt ctcacctgtt ccgaccaata ttttgtcggc
     7321 ctcacttttg tataggctca aaatatgctg taaaagcttt gttccataac ctttgtgatg
     7381 gtatttaggg tatactgcaa tattttttat ttcaacaacc ttttcacttt tatcgggcat
     7441 atgctcaaca gcacaaatag ccttcaattc aggatcataa agtccaaaaa tacggctttt
     7501 atcaagatat tttaatatca tactttcctg ttcatcacca attaacagca aatctaagta
     7561 tttcttttta tcacataaaa tttctttaat tatcataaat tcactttatc atgtcttttt
     7621 atttctgtat aataaaataa ctatttaaga gagtatcgga gttaagtatg tatttttatg
     7681 cagacctgca cattcattca aagtattcca gggcaacaag caaaagctgt aacctcgaag
     7741 agctggcaat ttgggcgcaa aaaaagggct tgagnnttga gtgttatatc aacgggtgac
     7801 tttacacatc cggcatggtt tgccgaaatt caggaaaaac ttgtgcctga taataacggt
     7861 gcgtacagac tcaaacctga aattgaaaaa caaataggcc taaaaacgcc aataaggttt
     7921 attttgtctg ttgaaatttc tacaatttat aaaaaaggcg ataaaacaag aaaagtgcac
     7981 catgtggttt ttgctccgga tatggaaatt gcacaaaatt tcagacaaaa actgggtgct
     8041 ataggcaata taaaatcaga cggacgcccg attttggggc tggactctcg agaccttctt
     8101 gaaattactc tggagtcagg cgatggtaca tatattatcc cggcacacat atggacaccg
     8161 tggttttccg ttcttggttc aaaatcgggg tttgactcta tagaagagtg ttacgctgac
     8221 ctttcagatc acatttttgc agtagaaaca ggactgtctt ctgaccctga gatgaactgg
     8281 cgggtgtcaa agcttgataa attcagactt gtatcaaact ctgatgcgca ctctccttca
     8341 aaacttgcaa gagaagcgac aatctttgat acagagcctg attatttcag cataatgaat
     8401 gcacttaaaa caggcagcgg ttatgtggga acagttgaat ttttcccgga agaaggcaaa
     8461 taccacgaag acggacatcg aaaatgtaat atttgttttt ctccgcaaga aacaataaaa
     8521 cacaacggta tttgtcctgt gtgcgaaaaa cctcttacaa taggtgtttt aaatagagtc
     8581 aatgagcttg ccgatcgtcc ctttgacagc acattcaaac ctactacagc cggtaaagtc
     8641 gtgagtcttg ttcctcttcc tgaaatgtta tcagagatta tgcaagtagg tgtacagagc
     8701 aagtctgtat gtgccgaata tgaaaggctt attctcaaat tcggatcaga actgtctatc
     8761 ttgacacagg tccctgtgga agaaatttct aaagattctc ctatgctggc agaaggtatc
     8821 tcaagactgc gtgtaaacaa agttatcaga catcccgggt atgatggaga atacggtgtt
     8881 atcaggcttt ttgaagaaga tgaaatctta aaaaaaaact ctgtaaatct aaaactggat
     8941 atcaaaatac cggaaacaca aaaaactcaa ccggcaaaag aaaataaata ttcagtaaaa
     9001 acacaggaat tcgtttttga gaaaacacac agcacttcca gctcaaaaga atcgaaacct
     9061 aaaaaagctt ctcttgatga attccagcag gctgctgtag aaaatccttg taaccagcta
     9121 ttgataatag caggaccagg ctccggcaag acgactgttc ttacaagaag aatctcttat
     9181 ttaataaaag acaaaaatat ttctgctaaa aattgtctgg ctataacctt taccagacgt
     9241 gcatctttag aaatgagaga aagactgcaa aaattattga acgctcagtc tgatgaaatt
     9301 aatattcata catttcactc aatgtgtctg gaaatattaa aagaaaatta tgaaaaagta
     9361 ggtcttagtc aggattttgg tgtgattaca ccacaggaaa aatctttata taaacaggat
     9421 gaaatccctg ataatttgat agaatttgat gatttgatta acctaacagt taaacttttt
     9481 gaggattatc cggcnnttta gcggatactg caaactatat ttttgttgac gaatatcaag
     9541 atattgatga aaaacaatac aaactcataa aacttctggc agataacgat gctaatttat
     9601 gtgcaattgg agacccgaat caggcaatat acgggtttag gggcggtgat tcaaaatttt
     9661 tcaacaattt ttctcaagac tatccaaatg taaanngtta ttaatctaaa aaataactac
     9721 cgctgtgcaa aaagcattgt agaagcctct aaccagttaa taaagtctga caacattatt
     9781 gcacgcaatc tttcatccaa agaaagaatt actatacata cggcacctac ggataaggca
     9841 gaggccgagt ttgtggtgag tgctatagaa aatcttattg gcggaaacag ctttttctca
     9901 atggattctc aaagagcaga cggtcaaatg gcggattttt cattcggaga ttttgctatt
     9961 ttgtacagaa cttctgcagc taaaacctat tgttgaggct cttgaacgtt caggaatgcc
    10021 ttttgttaaa ctttctgatg atatgctgtg tgacaacaaa agtgtgcgta aactcttaaa
    10081 acaactaaat gacacagagc ctgtaatcgt gcagcttgaa agattgtgcc cagattttaa
    10141 agaagagatt gaagattaca caataaaata cctgaaagaa cacgctattg catttcctga
    10201 aagaaaaacg tttattcacg aaatttcatt gctaaaacaa tctgacaccc ttgaccagcg
    10261 tgctgacaga attgctttaa tgacactcca ttcatcaaag gggcttgagt ttccgnnctt
    10321 gaagacggga ttgtgccttt gtacagagct caatcagtgc aagaaagaga agaagaaaga
    10381 cgtcttttgt atgttggtat gactagggca aaacaaagac tgttcttaac aagagcgtta
    10441 aaaagaaact ggcttggctc actcaaaaat ctggaaattt ctccgttttt ggatcgaatt
    10501 gaaaaagagc ttatcgaatt tagccggttt gaaaaagcac aaaaacaaaa cggccctaat
    10561 gtggctgatg acgcaagcca gctttcattg ttcaattaag ctgattgagc aagcacacgg
    10621 ggttttagct ccggttgctt ttgctttttc tcattaatat ttttataagc ataaacgctt
    10681 cctgctgcaa gtatacctgt aagccccaac aaagcagcag tctttttgcc acctgctttt
    10741 tccgggggta ttggagaagg tttttcaata atttctatta tgtcttgcgt tgctttattt
    10801 attgtttctt ttgctttagc ttttacgttt tcaaatatga tttttattaa gttttcgtca
    10861 tcagctaact ctctgccttt aaaaacttca tgttcaaagt ttaaagcaga gattctctct
    10921 tttaaagatg cgaaatattt cttttctgta ccttgtgcat tttgttctaa ggtgttaatc
    10981 atattaagat aatcttggaa atagctgaac gttttatgct gttgatctcc gtggcacaga
    11041 accagccact tgagctgcat ttttccaagc tctgctttca taacattttc agacggattt
    11101 gcaaaaactt ctttaaagat tttttcctgt tcaaccgcat tttttctcat atcgagttgg
    11161 gctttgtctg ttttagacag ttttaatgat tccaaaaact ctatcatttt gccgtggtat
    11221 tgttctgatt ttattttgag gtaatttgaa aagaaatctt tcggtttttc atcatgtccg
    11281 gtttttaggt agtcataaat tgttctgtat tcaaaaacag ttgcatttga atccattttc
    11341 aaaaacttgt tatcagaacg cataagaaaa tcaggctggt aatctgaata gaatgttgcc
    11401 ataaagcgtc cttctttggt cgaatttact agatttgcaa ttgttccgtt ctggtattgt
    11461 tcagcgggtc ttatgtcgga atttatataa tgaccactgt tctctaatat tgaaaaagaa
    11521 ccaaaatcaa taaatttagt tttgtctttg cctgtcaata ttatatttcc gccttgcaaa
    11581 tcgttattaa ctataccgtt tgtatcaaga gtaaatgctt tgtttaaaat gtctgttaca
    11641 tgtccttttg tcagctgtgt tttgtagggg tggcctccgg ttaggacttc ttcgacaaga
    11701 taatttttgc cgtttttatt tattatttca taaggggtga ctgcaatatc aggtgagatt
    11761 tcattgattt tttttaatgc aaaaaactct tttacattgc catatccgtt aaagtctgcg
    11821 ttttgatatt ctggatgaag cggcttgggg gctttgatgc caatttcgtc atttattttg
    11881 taaaactcac attgccagcc tcttgcaaga tgttttgctt ttgattgttc aatctgttca
    11941 ataaactgtt gagctgctgc tctatcgtag cctttaaaag aaatatttga atgtttttgt
    12001 tttacaaaag tatcgtttga ttgatgttga aaagtaacat aagcgtagtt gttagccggt
    12061 cttgtatttt ttacggnnta atgattcctt agcgttgtac catggattgc agaaatagcc
    12121 atgctcatat accccatctt tcaattaatt gtaagtatta taaatgattt tttttgctat
    12181 tacaaatgta aaattttgta aaatgcaaat taaatgtttt gattaactta aggtatttat
    12241 gtgctaaagt tgataatata tcctaaaggg attttgtgtt atgtacatag gagctattca
    12301 acagtataat tcatcacctt cgtttaaatc cggaagaact actctatata cggattttga
    12361 cggtacgttt atgccgtttt cgcacgaaga tgtttgcaat aatgattgtt ttaacaaaca
    12421 aaacgacttt tatcgcatgc acggcggtat agattatttc ttttcaagat tcaaagataa
    12481 ggtaaaactc attatcacaa caggacgcag caaaaatgaa tatgattatt ttgtaaaaaa
    12541 tttggagcaa aaaaatcttt atattcataa gcctcaggct cttattacaa gagacggctc
    12601 aagccgctac aactgcacga ataacgaaat taaagaagat accgtacgta acaatcccat
    12661 taaagaaagc atcaacctga aagatattaa ttttttgagt aataatatca aaaagattgt
    12721 aaaaagaatt tatccttcgg cttacattgt agaacccggt gttaataaaa accgtcacga
    12781 atacggtcac aaatctctgg aatatgtctt ggataaatca gattttgatg ataaaaacag
    12841 ttacatatcc atttcagaac ccgaacctct tgttatagaa atggcggttt caaaaaaata
    12901 tgacgtaaac agcattgcca aaagcataaa agactttgtt gatgccaata atataaaagt
    12961 atcagtaaat gcatttgaag atgacccgtt taattttctt ccgatttata caaccaacgg
    13021 aaaacaatat aaaaaagctg atacaattat aataaagcct cttatcgaag gttctgagat
    13081 tacaaagctt tatgacgtaa aaaatgaaat ccgtaaaaat attgaaaaca acaccaatga
    13141 ctttgtggta gcagcaggtg acggttttaa tgacgaacct atgctcaatc ctttaaatta
    13201 tcttgatttg tatggagtaa aaattgacaa aaacaaaagt atacaagaaa ttttgtcaga
    13261 caatgacact ttagaagcat taaaaaaact gcccttctgt gctatagtct gttccaatga
    13321 aaaagctttg gataatataa gaaaaatagg acaaatttta gattcaaaag gcatatacaa
    13381 agtaaaatcc acagataatc caagagagtt tcttttaaaa aacctgaaac aagcaataaa
    13441 tgattacggc gaaaccaatg atgaatttat gttttcattg ggtccggatt tatactgcag
    13501 cttatttgac aactaacaca taaggagaag agatgaaagt acatcaaatt atttcaaacg
    13561 tgtttgctaa aaacaaaaag gacaaacaaa aaacacagca accaaatctg gtaagtt
//
LOCUS       DABS01000111            5669 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_21752, whole genome shotgun sequence.
ACCESSION   DABS01000111 DABS01000000
VERSION     DABS01000111.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5669)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5669)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5669
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            109..342
                     /locus_tag="CPT85_04305"
     CDS             109..342
                     /locus_tag="CPT85_04305"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23931.1"
                     /translation="MKDLQSGAQSAIEYGVVVLLLVIIFAGSYKLYKNWTTPEPARIH
                     QANLVKSKKLMEKPSRELCTYVMNQCKARYDMH"
     gene            complement(344..739)
                     /locus_tag="CPT85_04310"
     CDS             complement(344..739)
                     /locus_tag="CPT85_04310"
                     /inference="COORDINATES: protein motif:HMM:PF03692.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23932.1"
                     /translation="MLDFLKSIYYEFLSYFVPEKMEYEITGECKKCGKCCNYMYSFDT
                     YTPKEFKIMQFLYPAYKRFYIKGKDKDGNLIFACKYVTKEGLCSVYDKRLAMCKRYPM
                     ARISYPADMHEGCGYTVHKKKFKDYLNKK"
     gene            complement(774..983)
                     /locus_tag="CPT85_04315"
     CDS             complement(774..983)
                     /locus_tag="CPT85_04315"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23933.1"
                     /translation="MELTKTRQDIYIDVIAFNIYDQEANNQLKCTALVTSGKFYSANT
                     AAELMHSLKQSLNAQKEVQGVIITH"
     gene            complement(983..1507)
                     /locus_tag="CPT85_04320"
     CDS             complement(983..1507)
                     /locus_tag="CPT85_04320"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23934.1"
                     /translation="MNLINFNFYSRKLIIIFIVLFTLFVKGVGVNSAPQKGCAVKDSD
                     EEFVLFIVDFSNSMSEKLHGTKKINMMLDTMQELLPQIPKNQRVGLRVYGHKGGYMVP
                     GMACKASSLLVPMIKGSAAQIQSALFSLQPTGWTPITYSLKQAVNCDFAGVKGXXXCS
                     QMGEKTVTKAHVIM"
     assembly_gap    1034..1042
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1523..2182
                     /locus_tag="CPT85_04325"
     CDS             1523..2182
                     /locus_tag="CPT85_04325"
                     /inference="COORDINATES: protein motif:HMM:PF00881.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23935.1"
                     /translation="MSTKVFEPQRRDFFEVLNTRKTIRKYTLDKPPIEAIKIIADAGR
                     QAPCATNTQNWEFIAVLDDRVKEKMARAVEQKYDELQQKVDNDIDKAKLNGYKYYSMF
                     FTKAPVVFAVVEKQRISTILTILEKNGMTKAELDNYDTRSSILSMGAAIENMSLTAHA
                     LGLATCWMCAPVVAHKEFGEILGVKEPDKVITLLTVGYPDGDNFSRPPKKELDEVFRI
                     V"
     gene            complement(2618..3352)
                     /locus_tag="CPT85_04330"
     CDS             complement(2618..3352)
                     /locus_tag="CPT85_04330"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23936.1"
                     /translation="MTPISPVFANIASSMGNYNWKKSATDPVELRRAKEIDFMRDMPW
                     MRDTSIQTALSEINDLVFSPEDMRYVKNMGIELPFHSGKECVDFIEKSNIRISFAKPY
                     EKTIHAQYDFSKNAILINKKYKNTKDFPVILAIGEAILHEAGHAKDKDGKSSVQEELN
                     FLGMNAIAHRAFIKKYGDLFSDSDAPIIKDGVSVYAKLFFEPDPEKKNLINRIRSKYG
                     DLPSGDRLHPPGKIARTIVTNKQSLI"
     gene            complement(3357..4616)
                     /locus_tag="CPT85_04335"
     CDS             complement(3357..4616)
                     /locus_tag="CPT85_04335"
                     /inference="COORDINATES: protein motif:HMM:PF00392.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23937.1"
                     /translation="MCGGSTLMSDKTASNKNIKNETGFEKIEKAELKRIEISQLPKEI
                     PNFKNSFESKDSVIKKWLTDWIKTGVQKGRLQENSLLPKKQDLAYYLGVSVGTIQNAI
                     RFVEDAGFLESKQRIGTIIRSSDSTDPIIRKASSKREKVIALIKKYIIDNDIKVNDPL
                     PSARALSAAIGNSTNTTRLALDYLGSQGIIAPRAFRSNESNWILKKTPEFDDTEKEFL
                     KSEELSADTLVEKVEAELKDYIKANFKVGDRLPAHQELSEILKVSIKTVHDAMKNLIE
                     EGYLLARRGRYGTTVIKLPYENLLQPQNEISIKEATIFASARDAAFYSYQKIENIIKN
                     YIKDNFEIGDKLPSMESLSEHFDVSSNTIRKALQNLSKQGYVNFSRGRYGGTFVMDIP
                     EDETESAETFRWLAVSPNYTITYDNEN"
     gene            complement(4706..5377)
                     /locus_tag="CPT85_04340"
     CDS             complement(4706..5377)
                     /locus_tag="CPT85_04340"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23938.1"
                     /translation="MADYYAQQLNNLRSCIDYRQDEANSIYQEAVKTIEEKLSKDKYP
                     ISRLNALSEKMDKASTQAQKEALFFEAETLYQEYFLDKAEDKHSQKLLMETKEYTEYQ
                     AEKIHKKINSIDTTADKMAYVMPVHIQKAAEQLSIPTSQYRQQLRDISLTAIRANNQD
                     ERVREFFEKAKNLYIKKTNAVYNAAYGIMKKMHAQYRQADYSPVQRKNTFLYLDGFSD
                     PISLN"
     assembly_gap    5457..5512
                     /estimated_length=56
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1556 a         1001 c         1060 g         1987 t
ORIGIN      
        1 tgttgtcaaa agccatagct atacagctag agcaagaaag ataattgagg atttgcgcag
       61 gcttgatgta taattataaa agttaaagcg taagggtaag gagttattat gaaggattta
      121 caatctggcg cacaatcagc aatagaatac ggagtagtcg tacttttgct ggtaattata
      181 tttgccggtt catacaaact ctataaaaac tggacaacac ccgagccggc aaggattcat
      241 caggctaatc ttgtcaaaag caaaaagctg atggaaaaac cttctcgtga gctttgtact
      301 tatgttatga accaatgcaa agcaagatat gatatgcatt agtctatttc ttgtttaaat
      361 aatctttgaa tttcttttta tgtaccgtat agccgcagcc ttcgtgcatg tctgcaggat
      421 agctgattct tgccatagga tagcgtttgc acattgcaag acgtttgtca taaacagagc
      481 ataacccctc ttttgttacg tatttgcaag caaagataag gttgccgtct ttgtctttgc
      541 cttttatgta aaaccgttta taggcggggt ataaaaactg cattattttg aattcttttg
      601 gggtgtatgt gtcaaaactg tacatgtaat tacagcattt gccgcatttt ttgcattcac
      661 cggtaatttc gtactccatt ttttcgggta caaaataaga aagaaattca taatatattg
      721 attttaaaaa atccaacata ctatgatttt agcataatgg ttctttattt tcgctagtgc
      781 gtgattatta caccctgaac ttctttttgt gcgtttaagg attgtttaag gctatgcatc
      841 agctctgctg ctgtatttgc actgtaaaat tttccgcttg tcacgagtgc agtacacttg
      901 agctgattgt ttgcctcctg atcataaata ttaaacgcaa taacatcaat atatatgtcc
      961 tgtcgggttt ttgtaagctc cattacataa tcacatgggc tttcgtcaca gttttctccc
     1021 ccatctgtga gcannnnnnn nngcctttta caccggcaaa atcacagttt actgcctgtt
     1081 tgagagaata tgtgattggc gtccaacctg ttggctgcaa agaaaaaaga gcgctttgta
     1141 tttgtgctgc actgcctttt atcattggta caagcaggct gctggctttg cacgccatac
     1201 ccggtaccat gtagccgcct ttatgcccgt aaactctaag acccacacgc tgattcttgg
     1261 gaatttgagg taacagctct tgcattgtat caagcatcat attgattttt tttgtgccgt
     1321 gaagcttttc agacatacta tttgaaaaat ccacaataaa aaggacaaat tcttcatcag
     1381 aatctttaac cgcacaaccc ttctgtggtg cggaatttac ccctaccccc tttacaaata
     1441 gtgtgaaaag tactataaat ataataataa gttttctgga ataaaaatta aagttgatta
     1501 ggttcatatt taggagtccc gaatgagtac aaaagtgttc gagccacaaa gacgtgattt
     1561 ttttgaggtg ctcaataccc gtaaaactat cagaaaatat acgctggata aaccccccat
     1621 tgaggctata aaaataatag ccgatgcggg cagacaggca ccttgtgcaa ccaataccca
     1681 gaactgggaa tttattgccg tgcttgatga cagagtaaaa gaaaaaatgg cacgtgctgt
     1741 tgagcaaaaa tatgatgagc ttcaacaaaa ggttgacaac gatattgata aggccaagct
     1801 aaacggctat aaatattatt caatgttttt tacaaaagct cctgtcgtgt ttgcagtggt
     1861 agaaaaacag agaatttcta ctattttaac aatacttgaa aaaaacggta tgacaaaagc
     1921 cgagctggat aactatgata cacgttcatc gattttgagt atgggagcag caatagaaaa
     1981 tatgtctttg actgctcatg cactggggct tgcaacgtgc tggatgtgtg cacctgttgt
     2041 tgctcacaaa gaattcggcg agatactcgg ggttaaagag cctgataaag ttatcactct
     2101 tttgacagtg gggtatcccg acggggataa cttttcaagg ccgcccaaaa aggaacttga
     2161 tgaggttttt agaatagttt aataattcat attgaaaagg tgagtcagtg acgacactag
     2221 attaaataaa aaagagggtt ttaaaccctc ttttttatac taaacccaac atttttttgt
     2281 accagctgaa tgtttccaat tcgagtccgt taaatgttgt ttttaagcat tgtcttttca
     2341 agtagttttc aaattcatcg ttgaatcttg attttacttc tttaacttcc gttgatgcag
     2401 ttttagtaga catagagcct cctttacaga aaatgtgaac ctatatattt atatcaaacc
     2461 tagaccttat gcgaataatt atatcacact ttttccaagt ttgccagcag atttactata
     2521 attgtaaaac ttgtaaacgt aaaattttgc taaaaatcaa gagattttga agatttgtat
     2581 ctttacatta ttttacaatt aggtgtaata aatacattta tatcaacgac tgtttgttcg
     2641 ttacaatcgt tcttgctatt ttaccgggcg gatgcagtct gtcgccggat ggcaaatcgc
     2701 catattttga ccttattctg ttaataagat ttttcttttc ggggtcgggt tcaaaaaata
     2761 attttgcata cacgcttacc ccgtctttaa taataggtgc gtcggagtca gaaaacaggt
     2821 ctccgtactt tttaataaaa gcacgatgtg ctattgcgtt catccccagg aagtttaact
     2881 cctcctggac agaacttttc ccgtctttgt cttttgcgtg gcctgcttcg tgcaaaatag
     2941 cctctccaat cgccagaata acaggaaaat cttttgtatt tttatatttt ttgttgatta
     3001 atattgcgtt tttagaaaaa tcatattgcg catgaatcgt cttttcataa ggtttggcaa
     3061 atgaaattct gatattggat ttttcaataa aatcaacaca ttctttaccc gagtggaagg
     3121 gcagctcaat gcccatgttt tttacatacc tcatatcttc cggagaaaat acaaggtcat
     3181 tgatttcgga cagcgctgtc tgaatagatg tgtctctcat ccagggcatg tcccgcataa
     3241 agtctatttc tttggcacgt cttaattcca cagggtctgt ggcgcttttt ttccagttat
     3301 aattgcccat tgaagaggca atgttggcaa aaacgggtga aataggtgtc attagattag
     3361 ttttcgttat cgtaagtgat tgtataatta gggcttactg ccagccagcg gaaggtttcc
     3421 gcgctttcgg tttcatcttc gggtatgtcc ataacaaaag taccgccgta tcttcctctg
     3481 gaaaagttga cgtagccctg tttagataaa ttttgcaaag cttttcttat tgtgttggac
     3541 gaaacatcaa aatgttctga caatgattcc attgatggta gcttgtctcc aatttcaaaa
     3601 ttgtctttaa tgtaattttt gattatattt tcaatttttt gatagctgta aaatgctgca
     3661 tcacgcgccg aagcaaagat agtggcttct tttattgata tttcattttg cggctgcaag
     3721 aggttttcgt aaggcaattt tattacagtt gtgccgtatc ttcctcttct ggcaagaagg
     3781 tagccttctt caataaggtt tttcatagca tcgtgtactg ttttaatgct tactttgagt
     3841 atttcggaaa gttcctgatg tgcaggcagt ctgtcgccta ctttaaaatt tgctttaata
     3901 tagtccttga gctctgcttc tactttttca acaagtgtgt cagcgctcaa ttcttcgctt
     3961 tttaggaatt ctttttccgt atcgtcaaat tcaggtgttt ttttcaaaat ccagttagac
     4021 tcgttggagc ggaatgctct tggggcgatt atgccttgag aaccaagata atcaagagca
     4081 agtcttgtag tgttggttga attgcctatt gcagcagaga gtgctcttgc cgagggcaga
     4141 gggtcgttaa cttttatatc attatcaata atgtattttt tgattagagc aatgactttt
     4201 tctcgcttgg aagaggcttt tcgtataata gggtcagtag aatcagagct tcttataatg
     4261 gtgccgattc tttgtttgga ttccaaaaat cctgcgtctt cgacaaatct tattgcattt
     4321 tgaatggtac cgacgcttac acccagataa taggcaaggt cttgcttttt gggcaaaagt
     4381 gagttttctt gcaaacggcc tttttgcacg cctgttttaa tccagtctgt gagccatttt
     4441 tttatgacag agtcttttga ctcaaaagaa tttttaaagt taggaatttc ttttggcagt
     4501 tgtgaaattt caattctttt taattctgct ttttctattt tttcaaaacc tgtttcgttt
     4561 ttaatatttt tgtttgatgc agttttatca ctcattaggg ttgaacctcc acacattatt
     4621 tagctaatgt taccataatt ataaataaac aacaagaatt tttttgttag tttttttcac
     4681 gatgtaaata aaaagtttac aaaagctaat tcaggcttat cgggtcgcta aaaccgtcca
     4741 gatataaaaa tgtgtttttt ctttgaacag gagagtagtc tgcttgcctg tattgggcat
     4801 gcattttttt cataatgccg taggctgcat tatatacagc atttgttttt tttatgtata
     4861 aattttttgc cttttcaaaa aactcccgca ctctttcgtc ctggttgttt gctcttattg
     4921 ctgtgagaga aatatctctc aattgttgtc tgtattgact tgttggtata ctcaattgtt
     4981 cggctgcctt ttgtatatgt acaggcatta cataagccat tttgtctgcg gttgtatcta
     5041 tagagttaat ttttttgtgt attttctctg cctgatactc tgtgtattct tttgtttcca
     5101 tcaaaagttt ttggctgtgt ttgtcttctg ctttgtctaa aaaatactcc tgatacaatg
     5161 tctctgcttc aaaaaataaa gcttcctttt gtgcttgagt tgaggctttg tccatttttt
     5221 ctgacagtgc attcagtctt gatatggggt atttgtcttt tgataacttt tcttcaatcg
     5281 tttttactgc ttcttgatag atgctgtttg cttcatcctg acggtaatct atgcaagaac
     5341 gcaggttgtt gagctgctgg gcataataat ctgccaaaac tttttcaata gtattgttcc
     5401 cttttgtgta aaagctgtca taggtaaagt cgtcttcaaa aaaatctctt ttaaatnnnn
     5461 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nntcttttct
     5521 ctctttaaac taattgtcac cttaaaagct ttaagtcagg aaagtaaaat ttttgccggt
     5581 tatttgttta attgttacaa atttgtttac aaatttacag caagaaggca atttgaacag
     5641 cacaaatgtt tttacatgtt tatcaagga
//
LOCUS       DABS01000112            4915 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9709, whole genome shotgun sequence.
ACCESSION   DABS01000112 DABS01000000
VERSION     DABS01000112.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4915)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4915)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4915
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(37..378)
                     /locus_tag="CPT85_04345"
     CDS             complement(37..378)
                     /locus_tag="CPT85_04345"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23893.1"
                     /translation="MNEDTLKPFMDNKDYTIIVSVDGADEKRKDLAHGFAFKGYDENF
                     VYLEDTYLNDDGSAKITKMKKNDFYSRLLEFSYTDLSKPLDKANNSLMYSPKITQTKE
                     VEQYLKNKDNN"
     gene            complement(459..1844)
                     /locus_tag="CPT85_04350"
     CDS             complement(459..1844)
                     /locus_tag="CPT85_04350"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23894.1"
                     /translation="MDIRVQNGENLSLVIKNALIKEGAADSDLKKFSIWNQILDLVDQ
                     QNAENKSNGKKAIYEGGNDRTSANWSQNYRVLAGSDLNFSDEIWNQIKSIVGLTPSVP
                     KEQPEALNKQLDAPVSPFEKKDTFPVPQQSNLPKINIETNYTQLGDNPSSVSEKHSST
                     NPDLLPISSSAQNPSKSVKEANNIVLSDMPAIESRDTAKTDIPTQSVELEKTTEVLPS
                     GAIVNKDGSIKYGEYLYSIDENGMETLKTKYGTYKATNMMNRDIIANTRAKIFGYHAT
                     NVPNLYLKDNQYYKWDENSKSYVKATIETQEARQTRLNAENRRKEEIQKLKATTADGV
                     LENFAQDGKGDCWLISSLKALNNSEKGKEIIKSCLSADNAGNITVNLKGIDKNYTITN
                     DEINAAIDSENSALGDKDAIAIELAFEKHIKSAIDSKKTNSNMDSINAGRYSMGDDYL
                     YGGXXKLLLKL"
     assembly_gap    481..485
                     /estimated_length=5
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2040..2064
                     /estimated_length=25
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2107..2775
                     /locus_tag="CPT85_04355"
     CDS             2107..2775
                     /locus_tag="CPT85_04355"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23895.1"
                     /translation="MTETAQETATMLWDKVRGKKSFNVNKTNPTNSTPTLLNEQIEAN
                     IKEKTPNAVNTVMRPDLPGVQKKSNFFKGVSYDVSLDSVEANKEIGNNLKLGTNIDVF
                     DKSIGANLEKSYNNGSVKIKGGIEYEPLDNAAKMSLNYSAPNNSIYGSAYLNKENPGV
                     NAGYYNKINKHSSLGASVSIFKDDAAFNANYKKTFKDNTNLTMGVYGSTRNKEIGVTA
                     RIGF"
     gene            2805..4142
                     /locus_tag="CPT85_04360"
                     /pseudo
     CDS             2805..4142
                     /locus_tag="CPT85_04360"
                     /inference="COORDINATES: protein motif:HMM:PF00324.19"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
     assembly_gap    3746..3753
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4139..4606)
                     /locus_tag="CPT85_04365"
     CDS             complement(4139..4606)
                     /locus_tag="CPT85_04365"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23896.1"
                     /translation="MRINSIRTSFPCNNTSKPKSFKQLQYDEDGLKTVPMSYFNHEKV
                     INALPQAKEKLDEDSFVKALIYARDNKPVLTLFNPLPSAYHSKTVDITDMIDSSSDSQ
                     ELSEKIYNRAMEIVCNNEFEEDKDPDVRDDDDYDFDDDTLRGTGWDLTDAYIP"
     gene            complement(4630..>4915)
                     /locus_tag="CPT85_04370"
     CDS             complement(4630..>4915)
                     /locus_tag="CPT85_04370"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23897.1"
                     /translation="GGFGVIAVLIVTQIIAKRMIVPFLSTPLAGFFKNYLDKREQKNG
                     IKTETPVTVDNQQSKVDSKNEQKSIVVINKDESSEHKAFKGFECMLNKSL"
BASE COUNT         1550 a          827 c          804 g         1696 t
ORIGIN      
        1 cttcgcaaat gcgaaggttt tttagtttta aaataatcaa ttgttatctt tgttctttaa
       61 atattgctca acttcttttg tttgagtgat tttgggtgaa tacatcaaag aattattagc
      121 tttatctaac ggttttgaca ggtctgtata gctgaattct aaaagtcttg aatagaaatc
      181 gttctttttc atcttagtta tttttgcact accatcatca ttaaggtatg tatcttccaa
      241 atatacaaag ttttcatcat accctttgaa agcaaatccg tgagccaaat cttttctttt
      301 ttcatcagcg ccgtcaacag atactattat tgtatagtcc ttattatcca taaatggttt
      361 taatgtatct tcattcatgc cttttaaaag tgcgacatgg tcttgaacaa caatattttt
      421 atctttagaa cggcttattg tcgatacatt aaggccggtt aaagtttcaa tagcaacttt
      481 nnnnncccgc catacagata atcatcaccc attgaatagc ggccagcatt tatgctatcc
      541 atgtttgaat tagtcttttt agaatcaata gctgatttta tatgtttttc aaaagcaagc
      601 tctattgcga tagcatcttt atcacctaat gcagaatttt cagagtcaat agctgcattt
      661 atttcgtcat ttgttatagt ataattttta tctatgcctt ttaaattaac ggtaatatta
      721 cctgcattgt ccgcagagag gcagcttttt ataatctctt tgcctttttc cgagttattg
      781 agagctttta aggaacttat aagccagcag tcacctttac cgtcttgagc aaaattttcc
      841 aaaacaccat ctgctgttgt agctttaagc ttttgtattt cttctttacg tctattttcg
      901 gcattaagcc ttgtttgcct agcttcttgt gtttctatag tggctttgac gtagctctta
      961 ctattttcat cccacttgta atattgattg tcttttaaat acaagttggg tacatttgtg
     1021 gcatgataac caaagatttt tgctcgcgta ttagcaataa tatctctgtt catcatattg
     1081 gtagctttat aagtaccgta tttagttttg agtgtttcca ttccgttttc atctattgaa
     1141 taaagatatt caccatattt tattgaaccg tccttattta caatagcccc tgatggcaga
     1201 acctctgtgg ttttttctaa ttcaacactt tgggtaggaa tatcagtttt agctgtatct
     1261 cttgattcaa tagcaggcat atctgataaa acaatattat tcgcttcttt aacacttttc
     1321 gatggatttt gagcagaaga tgagatgggt agcaaatcag gatttgttga agaatgcttt
     1381 tctgaaacag aagagggatt atctcccagc tgcgtataat tagtttcaat attaattttt
     1441 ggcaagttag attgctgtgg cacagggaat gtgtcttttt tttcaaatgg agaaacaggc
     1501 gcatcaagct gcttatttaa tgcctcaggc tgttctttag gcacagaagg tgttaaccca
     1561 actatggatt taatttggtt ccaaatttca tcggaaaaat tcaagtcact gcctgccagt
     1621 accctgtagt tttgtgacca attggcagaa gttctgtcgt taccgccttc ataaatcgct
     1681 tttttaccgt ttgatttatt ttctgcattt tgttgatcaa caagatccag tatttgattc
     1741 caaatgctga attttttcaa atcagaatca gcagcacctt cttttattag tgcatttttg
     1801 attactaaag atagattttc tccattttga acgcgtatat ccattttttt ccctgaattt
     1861 attaactaca aatatattta cggaataaca agagtaaact ttagcatttt catttaaaac
     1921 gttacaaaaa ttttacatat acaaaattca gacaaaagat tagcaatttt aagaataata
     1981 tatactttat atatacaaga ggattaatat gccggataaa gagatagaaa aatttgtaan
     2041 nnnnnnnnnn nnnnnnnnnn nnnncttcgc acaaccgaag aaaaatatgc tacgcaaata
     2101 actaacgtga cagaaaccgc tcaagaaaca gcaacaatgc tatgggacaa agtaaggggc
     2161 aaaaaaagtt ttaatgttaa caaaacaaac cccacaaact ctaccccaac gttgcttaat
     2221 gaacaaatag aagcaaacat aaaggaaaaa acaccaaacg ctgttaacac agtgatgaga
     2281 ccagatttac cgggtgtaca gaaaaaatca aactttttta aaggagtcag ctacgatgtc
     2341 agccttgaca gtgttgaagc aaataaagaa atcggaaaca atttaaaact cggtactaat
     2401 atagatgttt ttgacaaatc aattggcgca aatcttgaaa aaagttacaa caatggctct
     2461 gtaaaaataa aaggcggcat agaatatgaa ccgttggata atgctgccaa aatgagcctt
     2521 aactattctg caccaaacaa cagcatctat ggaagcgcat atctaaacaa agaaaaccct
     2581 ggcgttaatg ccggttatta caacaaaata aataagcaca gctccttagg agccagtgtt
     2641 tctattttta aagatgacgc agcattcaat gcaaactata aaaaaacatt taaagacaac
     2701 acaaatctta ctatgggtgt ttacggctct acaagaaata aagaaatagg tgtaacagca
     2761 aggatagggt tttaaatttc aagcttttat aatatgttaa ttatatgagt caagatttga
     2821 aaagaacact ttccctaact gatgcagtat caatagtagc cggctcaatg attggctgtg
     2881 gtatatttat agtttccgct gatattgcaa gacaggtaaa ttcaggacta ttactaatag
     2941 taatttggat gattgcaggt tttataacac tatgcggtgg tttgtctctt tgtgagcttg
     3001 cagcaaacat cacagaagaa ggcggacaat atgtatattt aaaaaaaatt ttcagtgaaa
     3061 aaatagcatt tttatacggc tggacattgt ttcttgtcat tcaaacaggt actattgcag
     3121 cagtttgtgt agcatttgca aagttttttg gtctgatagt tccgtttata agcagttcta
     3181 atattctttt taatttaggt tgcatacatt tttctacaca acaattattt gcagttttaa
     3241 ctgttatatt tctcagttac cttaactcaa gagggataaa atacggtgtt gttacacaaa
     3301 atatctttac cgtaaccaaa gttatatcaa tggctgcaat agtaataata gggcttttat
     3361 tcggttttaa tgctcatatt ttgcaagcaa acatgcatat gagtttcaat ttttcatttc
     3421 aaacaataaa tattatggca gtagccattg tcggtgcatt atttgcatct ataacctgga
     3481 acaatattac ttttattgca ggtgaggtaa aacatccgca aagaaacata ccaaaagcac
     3541 tggtatatgg agtagcattg gttgtttctt tatatttgct tatgaatatg atttatttag
     3601 gtgttttacc attgagtgaa atacaaacag cacctcaaga tattgtggca gcaagaacaa
     3661 taagtgaaat attcggaaca attggaaagg atataattgc ggttattatt atgatttctg
     3721 cgtttggatg cgctaacgga atgatnnnnn nnntggcaaa agatagagct ttttttagac
     3781 cgcttgctct aatcaacaga aaaacaaaag tacctgtaaa ttcactatgg gcacagtgta
     3841 tctggatatg catactaata ctatggggca attattcaga gcttttagat tttgtaatct
     3901 atgcctcttt gcttttttat atccttgtta cagctggtat ttttgtatac agaaaaaagt
     3961 ttccgcatgc aaacaaaaaa ttcaggataa attcattttt cccgataaca tttttggtgc
     4021 ttgccagcta tattgtaata tgtctttccg tgtacaagcc attatacaca ataccgggac
     4081 tgcttatcac actcgccggt attcctgtat ttcatatttg gcaaagagct aaaacgaatt
     4141 aaggtatata tgcgtctgtt aaatcccagc cagtgcctct gagcgtatcg tcatcaaaat
     4201 cataatcgtc atcatctctg acatctggat ctttatcttc ttcaaactcg ttattgcaaa
     4261 ctatctccat agctctattg taaatttttt cgctcaattc ctgcgagtct gaactagaat
     4321 caatcatatc cgtaatatct acagtttttg aatgatacgc agatggcaag ggattaaata
     4381 aagttaaaac aggtttgtta tctctagcat atattaatgc ttttacaaac gaatcttcat
     4441 caagtttttc tttagcttga ggcaaagcgt taatgacttt ttcatgatta aaataagaca
     4501 taggaacagt ttttaaacca tcctcatcat actgtaattg tttaaaagat tttggcttag
     4561 atgtattatt gcaagggaaa cttgtacgta tactattaat tctcatgaca aaatcccttc
     4621 ttttcttatt taaagagatt tattcaacat gcattcaaaa cctttaaaag ccttatgttc
     4681 agaagactca tctttattta taacgactat tgatttttgt tcatttttag aatcaacttt
     4741 agattgttgg ttatcaacag tgactggagt ttctgttttt ataccatttt tttgttcacg
     4801 tttatcaaga tagtttttaa agaaacctgc aagaggagta gacaagaatg gtacaatcat
     4861 acgttttgcg atgatttgcg tcacaatcaa tactgcgatt acaccaaagc cgcct
//
LOCUS       DABS01000113            9820 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_3699, whole genome shotgun sequence.
ACCESSION   DABS01000113 DABS01000000
VERSION     DABS01000113.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 9820)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 9820)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9820
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            193..>701
                     /locus_tag="CPT85_04375"
     CDS             193..>701
                     /locus_tag="CPT85_04375"
                     /inference="COORDINATES: protein motif:HMM:PF09360.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23882.1"
                     /translation="MLYGAPPVVKQTIIVDEEGISIEYANEGVFEIKTSPVALCRCGN
                     SKNSPFCDGSHINSKFDGTLKAEFNDILDKAQKYEGPTLTLFDNEKYCAFARFCDANS
                     GIWELIFKDDDFSISEVKRQADMCPSGRLIVFDKQGNLIETKLEKSIGILEDTNLRIS
                     GPLWLKGGI"
     assembly_gap    702..717
                     /estimated_length=16
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <718..827
                     /locus_tag="CPT85_04380"
     CDS             <718..827
                     /locus_tag="CPT85_04380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013157285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23881.1"
                     /translation="QIRTRQTLCRCGRSSNKPFCDCTHRHIHFKAQYKI"
     gene            875..1381
                     /locus_tag="CPT85_04385"
                     /pseudo
     CDS             875..1381
                     /locus_tag="CPT85_04385"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    899..916
                     /estimated_length=18
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1283..1302
                     /estimated_length=20
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1446..2108
                     /locus_tag="CPT85_04390"
     CDS             1446..2108
                     /locus_tag="CPT85_04390"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23874.1"
                     /translation="MKKLLITLILILSANTVSAYDYPPFIRDGIKPEDTVSYSPKDHK
                     WTRQAQSDDITFTKYMTKGSGGYSEYEYQNKQYEAGKDGSTYEFLHNGNLISYNSHQL
                     KFYKLDYINDKIEATELSAQEVKNLFPNLEIVMISSFKNNKITLYKPWLEQKTFMLLN
                     DTNTDFYKYQFENLGGYELIRGVFEVSKYQILPETFIFSHFGSKDKLTPPLKITVKNG
                     KN"
     gene            complement(2105..3526)
                     /gene="hydG"
                     /locus_tag="CPT85_04395"
     CDS             complement(2105..3526)
                     /gene="hydG"
                     /locus_tag="CPT85_04395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007784905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[FeFe] hydrogenase H-cluster radical SAM
                     maturase HydG"
                     /protein_id="DAB23875.1"
                     /translation="MYNPKSHKAEEFINHEEVLETLEYAEKNKNNIAVIDKILEKARL
                     KKGLTHKEAAVLLDCEIEEKNKEIFELAMEIKQDYYGNRIVLFAPLYLSNYCVNGCVY
                     CPYHHQNKHIPRRKLSQEEIKNEVIALQDMGHKRLAIEAGEDPVNNPIEYILESLNTI
                     YSVKHKNGAIRRVNVNIAATTVENYKKLHEAGIGTYVLFQETYNKETYERLHPTGPKH
                     NYAYHTEAMDRAMEAGIDDVSLGVLFGLELYRYEFTALMMHAEHLEAAFGVGPHAISV
                     PRIKKADDIDPSAFDNGIDDDTFAKIVACIRIAAPYTGMIVSTRESEECRKRLLSLGV
                     SQMSGGSKTSVGGYFNPMPETEDSAQFDISDRRPLDEVIKWLMELGYLPSFCTACYRA
                     GRTGERFMEVCKQQQIHNFCHPNAIITLKEYLEDYASPETKALGEKFIAKEMNILESS
                     EQIKNAVVEDLIKIEHGERDFRF"
     gene            complement(3614..5374)
                     /locus_tag="CPT85_04400"
     CDS             complement(3614..5374)
                     /locus_tag="CPT85_04400"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23876.1"
                     /translation="MNQIFFNSLNTIKYPFQKNKEHLPRQNVSFAQRRTSVDVYEKTY
                     TIIPYDIREDLHSLEYSFKQIKEILDKKTGEGVKSLINASGKFNTVDGITFKNVGDAC
                     DNVSFDSGSFKNLSGTIRITQRSSAGEIKQGWLIHNDRVVKNYNPSNPNSLPNNIEYY
                     SLEELQQSGINDKLRNVLANLDPVMLKVRQLAVAQKDTHLKTPAATISEDALHSLDKI
                     QDLTDKVIKTADEIPHSTLYKLNVKFPDYKQISGQSSYTFQNLGDDKIQINYSTIDSK
                     KLGYLQRLMVYDKEGQIRTGYLISDNKIVANFNPKIPAMMPEKFYYVDENKIQNAHYS
                     QAFEDYLNLYSDAINAYLKHITPDNNPASLPQEYAPVMESVRNCFESIEDKFAKINKV
                     KVSKLKTSYPDFLNMAGKRGYTFKNAGPNNETINIMRCKTKQCNDILKITVFDDKGDI
                     KDYLLVQDNFVISNYNPKYPMDIPSAPKFYNSRDIYKLSAFDYLESLNAKIADFEKFV
                     DEKITKKQQSKEEKRLQPEKVFEPKPISKKLGYKGIVAQCKRDFKEAVAKLQQGKEAK
                     EDFFKALDDIRAKVEDYFGE"
     gene            5432..6274
                     /locus_tag="CPT85_04405"
     CDS             5432..6274
                     /locus_tag="CPT85_04405"
                     /inference="COORDINATES: protein motif:HMM:PF01370.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epimerase"
                     /protein_id="DAB23877.1"
                     /translation="MIKNILITGSGGFVGKNLKEYFNSKYNLLCPRSFELDLTDCESV
                     KNFFSNNSIDFVIHCASTGGVRGCADPENCEQDNIKMVNNILFAKPETTKVIIFGSGA
                     AYSKARDLKKVKETQIGEVVPEDQYGKSKMELCKLALSRRDMLCLNIFACYGKYEKES
                     RFPSYAIIQNLKKEPVIINKNVVFDYLYIDDLCRIVEKFITSFPKSRVINVTPTKSIS
                     LLQIAQTVNQISGFESDIRFKEQGLNFEYTGDNSLLLKELPDFEFTDFNTGVTKLFNF
                     RKTL"
     gene            6271..8379
                     /locus_tag="CPT85_04410"
     CDS             6271..8379
                     /locus_tag="CPT85_04410"
                     /inference="COORDINATES: protein motif:HMM:PF00155.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23878.1"
                     /translation="MKIYPVTLHNKFIKNNLNVVNITTESNYHKKSQEKKPDLPIVSA
                     KLALISFYGDKKIKPSSRLENSDYKISNYIAEISKARYLHGDRAVVDMSMGNPDLTPP
                     EKAKQALKDKVNDLWSHRYNSPKGDGAFFYTVSSWMKKRFGVDIDPKKEVMATSGSSD
                     AIDHIFTAYANYGDKALVPDPGYSLYDDLITRHDLKKEAYKLYPQNGYLPDFSKMPKD
                     AKIMILNYPHNPTGSFAPKSIYEQAVKFAKENGILIIHDMDNSEITHSGKKPAGIMQA
                     KGAKDVAFEIHTFSKAQSMPGLRVAFAVSAKENIDNLLKAKYLSGGSVYIPVQAAAIE
                     ALKDEEGYISKVNKIYRNRKNTAINRLHKLGSDAKPTDGTYYLWAKIPPDFNSDEFFK
                     YVLHKSQIAFTPGDVFGPNGDGYVRIVMSANEKQINEAFDRIEKSGIRFDVSKHDLSE
                     DLQKEIAAMADGSYSIKPKEDRDFEAYMKLLPQKRELLLKRIQNKDSKYLSLVPKEDV
                     KLPWNILKDGQSVYLQNIKEGRSVFGEINDIMPFSSEKTYTDLAAEIKKQWKQEKYPQ
                     AEILPPYKSGKLYPDAQYFVLRAEGKIQAIANVEIQNDGCIWGRSLNTAPWNQGKERI
                     MKNSAKAVIARMVSFCLETGNDTLKFATDNPRNIALYKSLGMKEDGIRYFNGTPNTVL
                     RFDKEDMEMYLKKFQINLSF"
     gene            8582..9337
                     /locus_tag="CPT85_04415"
     CDS             8582..9337
                     /locus_tag="CPT85_04415"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23879.1"
                     /translation="MYYKGIVVGKALDRNHTDDYKYTLVNVVLYPKNLMLPDNTKVLL
                     KKEKRNNEKEHDFLELIYPKEPSDKMIADGTELKGKATVDVDSFMANQDPDDLQQIKE
                     NLASASENLDDATGQLTELLVLIQDVIKENQGSIKALSKNLAITTGNLNQITSKFDRS
                     IKQKSLDNTMTSIDESVKNVQTLTSSLNGTTQSINTAMPRIDTTLYETQSLVSNANAI
                     TCGIRQTLSKRFGGLRILFGKTVKECECNPCRR"
     gene            9385..9753
                     /locus_tag="CPT85_04420"
     CDS             9385..9753
                     /locus_tag="CPT85_04420"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23880.1"
                     /translation="MKLHSINTSFNSNYKTNFKQDQSEKAPVKKTGLLEKFHEKTKNS
                     ADMTDTIVVPRTIFKGYLGIMAGTTLITAGSLLGKTLAKTSKALSFAGLAASLYGTYA
                     FVRPFIIKDAPGVETKKEAV"
BASE COUNT         3447 a         1765 c         1693 g         2861 t
ORIGIN      
        1 ccccatgaac aacttgcagg aagaagaagc tgtaagctaa tattacaatt acttttcaaa
       61 tcataaataa aataataatt aacctttaaa atcattgaaa agtctgacaa actcttccat
      121 attttatttt aaaagttgag tatggaaaca aataaagaga tttacataaa ggttacaaaa
      181 aacgggccat aaatgcttta tggagcgcct cccgtggtca aacaaaccat tattgttgat
      241 gaagaaggca taagcataga atatgcaaat gaaggcgtct ttgagataaa aacatctcct
      301 gttgcgttgt gcagatgcgg caacagcaaa aactctcctt tttgtgacgg aagccatatt
      361 aacagcaaat ttgacggcac attaaaggca gaatttaatg acattttgga taaagcccaa
      421 aagtatgaag gcccgacttt aaccctcttt gacaacgaaa aatattgtgc atttgcaaga
      481 ttttgtgatg caaacagcgg aatatgggaa cttatattta aagatgacga tttttccatc
      541 tcagaagtaa aaagacaagc agatatgtgc ccttccggca gacttattgt ttttgacaaa
      601 caaggcaacc taattgaaac aaaacttgaa aaatcaatag gaattttgga agatacaaac
      661 ctaagaataa gcggcccatt gtggctgaaa ggtggcataa gnnnnnnnnn nnnnnnnacc
      721 agatacgtac acgacaaacc ttgtgcagat gcggcagatc atcaaacaaa ccattttgtg
      781 actgcacaca caggcatatt cattttaaag cgcaatacaa aatttaacct tacaatactt
      841 tttgttgctt atagattgtt ttattataaa ataattgtat aaagaaaagg agattatann
      901 nnnnnnnnnn nnnnnnttaa gcgcatttat cattggtatg tcagttaaca attacgctat
      961 ttccaacgta ccttcaaaaa ttgcagttgt tgatgtacaa aaagttgttg cttcttcagc
     1021 acaggtaaaa gctcttaaag cagatagaga agctaaaata aaagacctga caacatttgt
     1081 aagcaatgca agagctgctg ttaaaaaaga aactaatgct gataagaaaa aagctcttga
     1141 agctaaatat aacaaagaac tcaacgcaaa aagagatgca atccaaaaag attatgcaaa
     1201 aaaacttgct gaagttgaca aaaatatctc tgctgtaata gctcaaaaag ctaaagcagc
     1261 aagctatgat atggtaattg cannnnnnnn nnnnnnnnnn nngatatcac agctgaagtg
     1321 gctaaatcag ttaaataaaa atttcataaa acagtataaa aaagactacg caaaatgcta
     1381 attgcatagt cttttattat tttataatat ataataaatt tgcatctgat aggagtacgg
     1441 tcaaaatgaa aaaactttta attacattaa tacttatatt atcggctaac actgtatctg
     1501 catacgatta tccaccgttc ataagagacg gaataaaacc tgaagatacg gtatcgtact
     1561 cgccaaaaga ccacaaatgg accagacaag ctcaaagtga tgacataacc ttcacaaaat
     1621 atatgacaaa aggttcaggc ggatattcag aatatgaata tcaaaataag cagtatgaag
     1681 cgggcaaaga cggctctaca tacgaatttt tacacaatgg aaatttaatc agttacaatt
     1741 ctcatcaact taaattttac aaactggact acataaacga caaaatagaa gcaactgagc
     1801 tttcagcgca agaagttaaa aatctttttc ctaatttaga aatagtaatg atttcctcat
     1861 tcaaaaacaa caaaatcacg ctttataaac cctggcttga gcaaaaaaca tttatgctgc
     1921 tgaacgatac caacactgat ttttacaaat accagtttga aaacctgggc ggctatgaat
     1981 tgataagagg tgttttcgaa gtttctaaat accagattct gccggaaaca tttatcttct
     2041 cccatttcgg ctcaaaggac aagttgactc cgccattaaa aattaccgtc aaaaacggaa
     2101 aaaattaaaa acggaagtct ctttctccat gttcaatttt tatcaaatct tcaactacgg
     2161 cattcttgat ttgctctgag ctttcgagaa tattcatttc ttttgctata aacttttcac
     2221 caagtgcttt tgtctctgga gaagcatagt cttccagata ctcttttagc gtaattatgg
     2281 cattagggtg gcagaagtta tgaatctgct gttgcttgca cacttccata aaccgttcac
     2341 ctgttctacc agctctatag caagctgtac aaaagcttgg aaggtaaccg agctccatta
     2401 accattttat aacttcgtcc agcggacgtc tgtcggaaat atcaaactgc gcagaatctt
     2461 ctgtctcggg catagggtta aaatatccgc caacacttgt tttagaaccg cctgacattt
     2521 gagatacacc caaagacaaa agtctttttc tgcattcttc agactctctt gttgaaacaa
     2581 tcatgcctgt gtatggcgca gctatacgaa tacaggcaac aatttttgca aaagtatcat
     2641 catcaatgcc gttgtcaaaa gcagaaggat caatatcatc agctttttta atacgcggca
     2701 cactgatggc gtgcgggcca accccgaaag ctgcctcaag atgctctgca tgcatcataa
     2761 gagcagtaaa ctcatatctg taaagctcaa gaccaaacaa cacaccaagg cttacatcat
     2821 caatacctgc ctccattgcc ctgtccatag cctctgtatg gtatgcataa ttgtgttttg
     2881 gccctgtcgg gtgaagtctt tcatatgttt ctttgttata agtctcctga aaaagcacat
     2941 aagttccaat gcctgcctca tggagttttt tgtaattttc aacggtagtt gcagctatat
     3001 tcacattcac acgacggatt gcaccgtttt tgtgcttaac agaatatatt gtattcaaag
     3061 attccaatat gtactcaatg gggttgttaa cagggtcttc tcctgcttca atagcaagac
     3121 gtttatgccc catatcctga agagcaatta cttcattttt aatttcttct tgagagagtt
     3181 ttcgtctggg gatatgtttg ttttgatggt ggtacgggca atatacacag ccgttgacac
     3241 agtaatttga taaatacaaa ggagcaaaca gaacaattct gttgccgtag taatcttgct
     3301 tgatttccat tgcaagctca aaaatttctt tattcttctc ttctatttcg caatctagca
     3361 aaacagcagc ttctttatga gtaaggcctt tttttagcct tgctttttcc agaattttat
     3421 ctataacagc aatattattt ttgttttttt cagcgtattc taaagtttct aaaacttcct
     3481 catgatttat aaattcttcc gctttatgtg attttggatt atacatggta cccttctctc
     3541 tatctgtaaa caattatacc acgcttgaaa tacagcggca cacaattgtg aataatttca
     3601 cactatcgtg atattattca ccaaaataat cctctacttt tgcacgaatg tcatcaagtg
     3661 ctttaaaaaa gtcttctttt gcttctttgc cctgttgtag tttggcaaca gcttctttaa
     3721 aatcacgctt gcattgtgca acaattcctt tgtatcctaa ctttttagaa atcggtttag
     3781 gctcaaaaac cttctctggt tgtaaacgtt tttcttcttt agattgttgt tttttagtaa
     3841 ttttttcatc aacaaatttt tcaaaatcag caatctttgc attaagcgac tccaggtaat
     3901 caaaggctga taatttgtag atatcacggc tgttataaaa cttaggcgca gaaggtatat
     3961 ccatcggata ctttggatta taattgctta ttacaaaatt atcctgtaca agcagataat
     4021 cttttatgtc acctttatca tcaaaaactg ttatttttag gatatcatta cactgctttg
     4081 ttttgcagcg cataatattg atagtctcgt tattagggcc tgcattttta aaggtatagc
     4141 cgcgttttcc tgccatatta agaaaatcag gataagaagt ctttagcttg gaaactttta
     4201 ctttatttat ctttgcaaat ttatcttcta tagattcaaa gcaattgcgc acagattcca
     4261 ttacaggagc atattcctgt ggcaatgatg cagggttatt atcaggcgta atatgcttta
     4321 aataagcatt aattgcatcg gaataaaggt ttagataatc ttcaaaagct tgagaataat
     4381 gagcattttg aattttattt tcatcaacat aataaaattt ttcaggcatc atcgcaggga
     4441 ttttaggatt aaagttggca actattttgt tgtcactgat caaatatcct gttctaatct
     4501 gcccttcttt atcataaacc attaatcttt gcagataccc gagtttcttg ctatctattg
     4561 tagaataatt tatttgaatt ttatcatcgc ctaaattttg aaaagtataa gaactctgtc
     4621 cggagatttg tttataatca ggaaacttca cattaagctt atacaaagtg gaatgaggta
     4681 tctcatcagc tgtttttatg actttatcag tcaaatcctg aattttatcc agagaatgaa
     4741 gagcatcctc agaaatggta gcagccgggg tttttaaatg cgtatctttt tgagcaacag
     4801 ccagctgcct aaccttaagc atcacagggt caaggtttgc cagcacattt cttagtttgt
     4861 catttatgcc ggattgttga agctcttcaa gtgaataata ttcaatatta ttcggcagag
     4921 aatttggatt tgacggattg taatttttaa caactctgtc gttatgaatc agccacccct
     4981 gtttaatttc gccggcagaa gatctttgcg taattcttat tgtgcctgat agatttttga
     5041 aacttcccga gtcaaaagaa acattatcac acgcgtctcc aacattttta aaagtaatac
     5101 catcaactgt attaaattta ccggatgcat taattaaaga ttttacaccc tctccagttt
     5161 ttttatcaag aatttctttt atttgtttaa aagaatattc aagagaatgc aaatcttctc
     5221 ttatatcgta agggataatt gtgtacgttt tttcataaac atcaacactt gtgcgtcgtt
     5281 gagcaaaact tacattttga cggggcaaat gttctttgtt tttctgaaaa ggatatttaa
     5341 tggtatttaa agagttaaaa aaaatctgat tcatacaagt tagaaaacac gtaaaaaaat
     5401 ttttttgcct tttatatgat atcattgtcc tatgattaaa aatattttaa taacgggctc
     5461 tgggggcttt gtcggaaaaa atttaaaaga atattttaat tctaagtaca atcttttatg
     5521 tccaagaagt tttgaactgg atttgacaga ttgtgaaagt gtaaaaaatt ttttttcaaa
     5581 caacagtatt gattttgtta tacattgtgc ctctacaggc ggtgtcagag gctgtgccga
     5641 ccctgaaaac tgtgaacagg ataatataaa aatggtaaac aatattctgt ttgcaaagcc
     5701 tgaaacaaca aaagtcataa ttttcggctc gggagcagca tattcaaaag caagagattt
     5761 aaaaaaagta aaagaaactc aaataggcga ggttgtaccg gaagatcagt acggtaaatc
     5821 aaaaatggag ctatgtaagc tggctttatc aagaagagat atgttgtgcc taaatatatt
     5881 tgcatgttac ggaaaatatg aaaaagaaag cagattccca tcctatgcga ttattcaaaa
     5941 cctaaaaaaa gagcctgtga taatcaacaa gaatgttgtg ttcgattatc tttatatcga
     6001 tgatttatgc agaattgtgg aaaaattcat aacaagcttt cccaaaagca gagtaataaa
     6061 tgtcacacca acaaagagta tttcactgct gcagatagca caaacagtca accaaataag
     6121 cggatttgaa tcagatataa gattcaaaga acaaggtctt aattttgaat acacaggcga
     6181 taactcactg cttttaaaag agctgccgga ttttgagttt acagatttta acacaggtgt
     6241 aacaaaacta tttaatttta gaaagacttt atgaaaatat atcccgtaac tttgcacaat
     6301 aaatttataa aaaacaacct taatgttgta aacattacga cagaaagtaa ctatcataaa
     6361 aaatcacaag aaaaaaagcc tgatttaccc attgtcagcg caaaacttgc tttgataagt
     6421 ttttatggag acaaaaaaat aaagccgtct tcaagacttg aaaattcaga ttacaaaatt
     6481 tcaaattaca ttgcagaaat aagcaaagca agatacttgc acggagacag agcagttgtt
     6541 gatatgtcaa tgggcaatcc tgatttaacc ccgccggaaa aagcaaaaca ggcactaaaa
     6601 gataaagtta acgacctttg gtcacacaga tataacagtc ccaaaggaga tggcgcattt
     6661 ttttatacgg taagcagctg gatgaaaaaa agattcggtg tggatattga ccctaaaaaa
     6721 gaagtaatgg ccacatccgg ctcctcggat gctattgacc atatatttac agcttatgca
     6781 aattacggcg ataaagcgct tgttccagac ccgggatatt ccttgtacga tgaccttata
     6841 acacgtcatg acctaaaaaa agaagcatac aagctgtatc cgcaaaacgg atatctgccg
     6901 gatttttcaa aaatgccaaa agatgcaaaa ataatgattc taaattaccc gcacaatcct
     6961 acgggttctt tcgctccaaa aagtatctat gaacaggcag taaaatttgc aaaagaaaac
     7021 ggaatcctaa tcatccacga tatggataac agcgaaatta ctcattccgg caaaaagcct
     7081 gccggaatta tgcaggctaa aggagccaaa gatgttgctt ttgaaataca cactttttct
     7141 aaagcacaga gtatgccggg tcttcgcgtt gcctttgccg taagcgcaaa agaaaatatc
     7201 gacaaccttt taaaagctaa atatctttca ggcggaagtg tttatattcc cgtacaggca
     7261 gctgcaattg aggccttaaa agacgaagaa ggatacattt caaaagtaaa caagatatac
     7321 aggaaccgta aaaatacggc tataaacaga ctgcacaaac ttggcagtga tgcaaaaccc
     7381 acagacggaa cttactatct atgggccaaa attccacctg attttaactc tgatgaattt
     7441 tttaaatatg ttttacacaa atcacaaatt gccttcacgc ccggtgatgt ttttggccca
     7501 aacggcgacg ggtatgtcag gatagtaatg tctgcaaatg aaaaacaaat aaacgaagca
     7561 tttgacagaa ttgaaaaatc aggaatcaga tttgatgttt caaaacacga cctgagcgaa
     7621 gacttgcaaa aagagattgc cgcaatggca gacggctctt actctataaa accgaaagaa
     7681 gacagagact ttgaagcata tatgaaactt ttacctcaaa aaagagagct gcttttaaaa
     7741 agaatacaaa acaaagactc caaatacctg tcacttgtgc caaaagaaga tgttaaacta
     7801 ccttggaata tactaaaaga tggtcagagc gtatatcttc aaaatataaa agaaggccgc
     7861 tctgttttcg gcgaaataaa tgatattatg ccttttagca gcgaaaaaac atatactgat
     7921 ctggcagcag aaattaaaaa gcaatggaaa caggaaaaat atccacaagc agagattttg
     7981 ccaccctaca agtcaggaaa attatacccc gacgcgcaat attttgtgtt aagagctgaa
     8041 ggaaaaattc aagcaatagc taatgtagaa attcaaaatg acggctgtat atggggaaga
     8101 agccttaaca cagcaccctg gaatcagggc aaggaaagaa ttatgaaaaa cagtgcaaaa
     8161 gctgtaattg ccagaatggt gagtttttgt ctggaaacag gcaacgacac actaaaattt
     8221 gcgacagata atccgcgcaa tatagcactg tacaaatccc ttggaatgaa agaagacggc
     8281 ataagatact tcaacggtac gcctaatacc gtactgcgct ttgataaaga agacatggag
     8341 atgtatttga aaaaattcca gataaacctg agcttttaat aatattaaaa caattaatta
     8401 gccgtatcgg gtatttattc atattaaaat cagatatatt atttgaacta tgaaaaaata
     8461 cttttattta gcttctatag ctattttgct agggctcggc ttttacattt ataaactcac
     8521 aacctatacc tatataacag tcaagtttag cgaactgaga ccatttcatc atcgtattcc
     8581 tgtgtattac aaaggaattg tcgttggtaa agcattagac agaaaccata cggatgatta
     8641 caaatatacc ctcgtaaatg tcgtcttata tcccaaaaat ctcatgctgc cagacaacac
     8701 taaggttctg ttaaaaaaag aaaaaagaaa taacgaaaaa gagcacgatt ttttagagct
     8761 tatttatccc aaagagcctt ccgacaaaat gatagctgac ggaacagaat tgaagggaaa
     8821 agcaacagtt gatgtagatt cttttatggc aaatcaagat cctgacgact tacagcagat
     8881 taaggaaaat ctggcaagcg catccgaaaa cctagacgat gcaacaggcc agcttacaga
     8941 acttctggtg cttattcaag atgtgattaa agaaaatcag ggaagcataa aagccttatc
     9001 aaaaaacctt gcgattacaa caggaaattt aaaccagatt acatcaaaat ttgatcgttc
     9061 aatcaaacaa aaatcgcttg ataacacaat gaccagcata gatgaatccg ttaaaaacgt
     9121 acaaactctc acaagcagcc taaacggtac aacgcagagc atcaataccg ctatgccaag
     9181 aatagataca acgctttatg aaacacaaag ccttgtcagc aacgcaaatg caataacttg
     9241 tggcataaga caaactcttt ccaaacggtt tggcggtttg aggattttat ttggaaaaac
     9301 tgttaaggaa tgtgaatgta acccttgcag gcgctgattt ttgaagtatt atgattgtgt
     9361 agacaaaggg aatggaaccg aaacatgaaa ctgcactcta ttaatacttc attcaactca
     9421 aattacaaaa caaattttaa acaagatcaa tcggaaaaag cgcctgttaa aaaaacagga
     9481 cttcttgaaa aattccatga aaaaacaaaa aacagtgctg atatgacaga tactattgtt
     9541 gtgccaagaa caatatttaa aggatatctt ggtataatgg caggcactac attaataaca
     9601 gcgggcagcc ttcttggcaa aacgcttgca aaaacatcaa aagcactttc ttttgcaggt
     9661 cttgcagctt cattatacgg cacttacgca tttgtaagac cgtttattat caaagatgca
     9721 cccggtgttg aaacaaaaaa agaagcagtt taatttcgct ttaaaaaaaa tgattttata
     9781 ataaaataaa cctatggaga ggtgtccgag tggtttaagg
//
LOCUS       DABS01000114            5794 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9258, whole genome shotgun sequence.
ACCESSION   DABS01000114 DABS01000000
VERSION     DABS01000114.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5794)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5794)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5794
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..643)
                     /locus_tag="CPT85_04425"
     CDS             complement(<1..643)
                     /locus_tag="CPT85_04425"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23848.1"
                     /translation="MGFKNYNKKLLITLFSILAFIVMLNYLVNPYNIFQQRIFKTTLL
                     KPEAKIQERVTKPIGLKINKRKIDAVFFGTSRVDLGLDRDYYKKLTGKEADNIAIGGL
                     LFYEMFDVIDIALKVHPEIKHIYIGVDYGTFLKEDKSQYKNRALITKNPKLETSEIGV
                     ALLCLKTSANSVWSVIKTLSGNKKRMFYSSGKKYIFVNKKMKREFEKTWLEYNI"
     gene            814..1143
                     /locus_tag="CPT85_04430"
     CDS             814..1143
                     /locus_tag="CPT85_04430"
                     /inference="COORDINATES: protein motif:HMM:PF13560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="DAB23849.1"
                     /translation="MDSLKRNFGLRVRELRKSAHMTQEQLAEKLGMDTPNVCRMENGT
                     HFPQTKNLVKLAEILNVEIKELFEYAHLQSKSELVKKINSFLKTATLKDAELVYKFIK
                     GLKEYKN"
     gene            complement(1227..1634)
                     /locus_tag="CPT85_04435"
                     /pseudo
     CDS             complement(1227..1634)
                     /locus_tag="CPT85_04435"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1294..1307
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1795..3165
                     /locus_tag="CPT85_04440"
     CDS             1795..3165
                     /locus_tag="CPT85_04440"
                     /inference="COORDINATES: protein motif:HMM:PF07992.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="DAB23850.1"
                     /translation="MKTRVVIIGGVAAGPKIMAKLLRTKEFECQIDLYTEEDMISYSA
                     CGLPYFIEGLIEDPQRLIVRRPEQFEELGANIHLNKRCIKIMPDEKKIRIEDIKTGEI
                     EEVEYDKLAITTGARPVLPAIKNIHLPNIFTVRKLQDGINIRNKMRDPETKKAVIVGA
                     GYIGIEMLEAFYLNGIETHMLEMNEHILSIFDPEISDMIQEEILRMSDGKVKITTSDA
                     VIAFEGNGKVERVITHNGHIIEADMVIIAVGVTPNTEIAKAAGIELGVSNAIRVNNRM
                     QTNIKDIYAAGDCIENFHLVSKNYAWIPLGSSANKEGRCAAINISGQYDSFPGVLGSA
                     VTRYDGLTLSMTGLSETEARKFGFDVISSTMTKKDKAGYMPSAENITIKLIADRCTKK
                     ILGAQSIGSGDADKRVNTVASAIQADQTIDEFLHLDMTYAPPFSTAVDPLLSAALVIN
                     NQLFKP"
     assembly_gap    3426..3427
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3685..5043)
                     /locus_tag="CPT85_04445"
     CDS             complement(3685..5043)
                     /locus_tag="CPT85_04445"
                     /inference="COORDINATES: protein motif:HMM:PF08353.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramyl peptide synthase"
                     /protein_id="DAB23851.1"
                     /translation="MNMMEKISFYGALFGAKMINHGLHLFKSAGTSLPGVVALKISSN
                     FLSFLSKYCKKDIVTVTGTNGKTTTSGLLAHILKMSDNTVLHNEKGANMLSGIASSLA
                     VNYKPFSSFDYAVLESDEAYLTKLYDYLKADYLLVTNLFRDQLDRYGELDTTAKKIQE
                     AVTKNPQLKLFINADDPMLLELGKDNKRIYFGFDNITYKNSIQESQAPAEAVYCPCGS
                     DLFYEKRYYAHIGRYCCPECKKTRPEPDYKGYAVIYDDCSEIYLKFKQDNQEKELCFK
                     TNLVGLYNAYNALAAISAALELKIAPDIIQKGLDTYKSAFGRAEKYSIKGKNVLVQLI
                     KNPTGASEVLRTVNSSTCAKLLIIINDNYADGRDVSWLWDANFEMLKDYPHDIVVSGV
                     RAYDMAVRLKYAGFDASKIEVKNNIKEAFYYCLDSIEQGEQLLVMPTYTALLEMQKFA
                     RK"
     gene            5072..5266
                     /locus_tag="CPT85_04450"
                     /pseudo
     CDS             5072..5266
                     /locus_tag="CPT85_04450"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    5212..5224
                     /estimated_length=13
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5399..5629)
                     /locus_tag="CPT85_04455"
     CDS             complement(5399..5629)
                     /locus_tag="CPT85_04455"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23852.1"
                     /translation="MLFIIPAFSYAIFSIVSPSLSVWSRLIDVITESRFVLMAEVASS
                     RPPSPVSIMQMSVSLYAKYLYAAAVRISNSVR"
     gene            5640..>5794
                     /locus_tag="CPT85_04460"
     CDS             5640..>5794
                     /locus_tag="CPT85_04460"
                     /inference="COORDINATES: protein motif:HMM:TIGR01499"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23853.1"
                     /translation="MISGENKGFHTIEQIAKEKNSPVLTPQNSVELCFENGKNYAVVH
                     NKKYAFNL"
BASE COUNT         1844 a         1108 c         1026 g         1787 t
ORIGIN      
        1 caatgttgta ttctagccat gttttttcaa actctctttt cattttttta tttacaaaaa
       61 tatatttttt tccgcttgaa taaaacatgc gttttttatt tccgctaaga gtttttatta
      121 ctgaccagac actgtttgca gatgttttta agcataaaag agccacccct atttcacttg
      181 tttccagttt tggatttttt gtgattaaag ccctgttttt gtactgactt ttgtcctctt
      241 tcaaaaatgt gccgtagtca acgcctatgt agatatgctt tatttcagga tgtactttta
      301 aagcgatatc aatcacatca aacatctcat aaaatagaag tccgcctatt gcaatattgt
      361 ctgcttcttt accggtgagc tttttgtaat aatctctgtc cagccccaag tctacccgcg
      421 aggttccaaa aaagaccgca tctatttttc ttttgttgat ttttagccct attggttttg
      481 ttacacgttc ttgaatcttt gcttccggtt tgagaagagt cgttttaaaa attctttgtt
      541 gaaaaatatt atacggatta acaagataat taagcattac tataaaagca agaatgctga
      601 aaagtgtaat cagtaatttt ttgttgtaat ttttaaaacc cactattttt attccattga
      661 tgtaacatgc taattttttg aagatttttt gatatttaac tacaataaac aacttaatac
      721 atgtcatgat ttatcaagtt tgtcaagaaa aattgctaaa tttcgtcatt attttgtaag
      781 ccatatacct atatccttat ttaggaggcg aaaatggatt cacttaaaag aaatttcggt
      841 ttgagagtca gagaactaag aaaatccgca catatgacac aggaacagct ggccgagaaa
      901 ctcggcatgg atacaccaaa cgtgtgcaga atggagaacg gaacgcattt tccacaaaca
      961 aaaaaccttg ttaagctggc agagatattg aatgttgaaa taaaagagct ttttgaatat
     1021 gcacacttgc aatccaaatc tgaacttgtc aaaaaaatca acagtttttt aaaaacggca
     1081 acacttaaag acgcagagct tgtatacaaa tttattaaag ggctcaagga atataaaaat
     1141 tagtttttta aatattaaac agacaaaaaa aagctgttga attaggggtt caacagcaca
     1201 gtctaaacag ggatgataaa ataaaattat aaattttgaa aatttattgc gttagaagat
     1261 gtgtaagaaa cacctctgaa agaacgctct tgcnnnnnnn nnnnnnnatc gtctacacaa
     1321 tttaagaaag tcaaagactt gtcgctcatc attcttaatg ttttttgttc gggttttgca
     1381 tttgtaatta cggtttggat ggggaaatat tcggagaatt cgcttattgt agaagctata
     1441 acataattgt acatgtcagc atctataata acgtaagaga ttccggcaat ctcaagatat
     1501 ctttgagcag attctgtctc tgttaccgaa aaaatatttc tttcagaaat tcccgcctca
     1561 agacattttt gtgtcagctc tgacaatgcc tgaatatcat tttgtattaa gagtattgtt
     1621 gttttgttta tcattttctc tcatacctct tacagtgagt atatcgatac atgaaaaatt
     1681 ttctttacaa ctaaagttgt aatatcctcc aaatgatgta gtttaaaaaa agtcgtcacg
     1741 tggtacatcc cgcaggcaat agacaaagtc catagcggtt tttaaaatga cactatgaaa
     1801 acacgagttg taataatagg cggtgttgcc gcaggaccca aaataatggc aaaactcttg
     1861 agaacaaaag agtttgaatg ccagatagac ctttataccg aagaagatat gatctcatat
     1921 tccgcatgcg ggctgcctta ttttatagaa gggcttatcg aagaccccca aaggcttatt
     1981 gtaagaagac ccgaacagtt tgaagaactg ggtgctaaca tacatcttaa caaaagatgc
     2041 ataaaaatta tgcctgatga aaagaaaata cgcatagaag acataaaaac aggtgaaata
     2101 gaagaagtag aatacgacaa actggcaatc accacaggag caagacctgt tttgcctgca
     2161 ataaaaaata tccacctgcc taacattttt actgtaagaa aactgcaaga cggcattaat
     2221 ataagaaaca aaatgcgcga ccctgaaaca aaaaaagcag taatagtagg cgctggttat
     2281 ataggtatcg aaatgcttga ggcattttat ttaaacggta tcgaaacgca tatgcttgag
     2341 atgaacgagc atattctctc aatttttgac cccgaaatca gtgatatgat tcaagaagaa
     2401 atacttcgca tgagtgacgg caaagtaaaa atcaccacat ccgatgccgt catagcgttt
     2461 gaaggcaacg gaaaagtaga aagagtcatt acccacaacg gacacataat agaagctgat
     2521 atggtaataa tagctgttgg cgtaactcct aacactgaaa ttgccaaagc agctggaata
     2581 gagcttggtg taagcaacgc catcagggtc aacaaccgca tgcaaaccaa tatcaaagac
     2641 atctacgcag caggtgattg tatagaaaat ttccacctcg tgtccaaaaa ttatgcgtgg
     2701 ataccgcttg gctcttctgc aaataaagaa ggacgctgtg ctgcaataaa tatatcggga
     2761 cagtatgact ctttcccggg ggttctcggc tctgctgtga caagatatga cgggctcaca
     2821 ctatctatga ctggtttgag cgaaacagaa gcaagaaaat tcgggtttga tgtaatttct
     2881 tcgaccatga caaagaagga taaagcagga tacatgccct cggcagaaaa cataaccata
     2941 aagctgattg cagacagatg tacaaaaaaa atcctcggtg cccaatccat cggaagcggc
     3001 gacgcagata aaagggtaaa caccgtcgca tctgcaattc aggcagacca gaccattgac
     3061 gagtttctac accttgacat gacttatgca ccgccttttt ctacagcggt tgatcctttg
     3121 ttatccgctg cgcttgttat caacaaccag ctttttaaac cataaaaaac aggctcatta
     3181 attgagcctg ttttttattt ccccaaatct aattgcattg cctaaatgat attttgcttt
     3241 atattttctc tattagtctg tcagcctttg tttcaatttc cccaaatcga atagctttgc
     3301 ctctttatgt tgattagtcc agtaatgctt ctaagatatt tgcatttttt gtagccagtg
     3361 agttttctct tactttttgt ttgtgaatat atgttctgag tgcttctctg ataagttcgc
     3421 ttcttnntct acttctgcaa ctccatcaat tttgtttaaa aattcttcgg gcattgaaat
     3481 taaaactctt gccatagttg attcctccag ttataaatct tgtaatctct tttgtggttt
     3541 gtgtttggaa gttttgttcc ttactcttat ataaagtatt ttttagataa ttaattgcta
     3601 aaacttatct aaaaaatata tacaaattcc caaaaccctt gattctcaag ggctatattg
     3661 ctttacaaaa cttaacaaaa cagattattt tctggcaaac ttctgcattt ccaacagcgc
     3721 agtgtaagtt ggcataacaa gaagctgttc gccctgttca atactgtcaa ggcaatagta
     3781 aaaagcttct ttaatattgt tttttacctc aatttttgaa gcgtcaaacc ccgcatattt
     3841 cagcctgaca gccatgtcat aagcgcgcac cccgcttaca acaatatcgt gaggatagtc
     3901 tttgagcatc tcaaaattcg catcccacag ccatgacaca tctctgccgt ctgcgtaatt
     3961 gtcgttgata attatcaaaa gctttgcaca tgtgctgctg ttaacggttc tcaagacttc
     4021 tgacgcgcct gtggggtttt ttatcagctg caccagcaca tttttgcctt ttatactata
     4081 tttttccgca cgcccaaaag ccgatttgta cgtatcaagc cctttttgga taatatccgg
     4141 cgctatttta agctcgagcg ctgcacttat tgcggcaagt gcgttataag cattgtacag
     4201 ccccacaagg tttgttttaa aacagagctc tttctcctga ttatcctgtt taaatttgag
     4261 ataaatttct gaacagtcat cataaataac cgcataacct ttataatcag gctccggtct
     4321 tgtttttttg cattcagggc agcaataccg gcctatatgt gcgtaatatc ttttttcata
     4381 gaacaaatca gacccgcacg ggcaatacac agcctctgca ggagcctgag attcctgtat
     4441 ggaatttttg taggtaatat tatcaaaccc gaaataaatc cttttgttat ctttgccaag
     4501 ctctaagagc atggggtcat cagcgttgat aaaaagcttt agctgtggat tttttgttac
     4561 agcttcttga attttttttg ctgtagtatc aagttctccg tatctgtcga gctggtctct
     4621 aaaaaggttt gtcacaagca gataatcagc ttttagataa tcataaagct ttgtcaaata
     4681 cgcttcatcg ctttccagca ccgcataatc aaagcttgaa aacggtttat aattcacagc
     4741 gagcgagctg gcaatgccgg agagcatgtt tgcgcctttt tcattgtgca gcacagtgtt
     4801 gtcgctcatt tttaaaatat gagccaaaag ccctgatgtg gtagtttttc cgttagtgcc
     4861 ggtgactgtc acaatgtctt ttttacaata tttagacaaa aaagataaaa agttgctcga
     4921 aatttttaat gcaaccacac ccggcaatga tgtacccgcg cttttaaaaa gatgcagacc
     4981 gtgatttatc atttttgcac caaaaagtgc gccgtaaaaa cttatttttt ccatcatgtt
     5041 catatgaatg attatatcgt aaaattatat tatggagaat gaaaactatc ttaatgcaat
     5101 aaacctgata acctcaagag aaaaattcca catctgcctc gggcttgata ggatttcaaa
     5161 aatgcttgag cttcttggca atcctcaaga caggctgaat attatacacg tnnnnnnnnn
     5221 nnnnttgcgc aatactttct tcaatattaa ctgcagcggg ttttaaaaca gggctgtaca
     5281 caagcccgca catcacagaa tacactgaac gcataaaaat aaataacaga gatatttcaa
     5341 aaaccgattt tgcatacctt attacagata tcagtgctat agcctcagag catgatatct
     5401 atcttacaga gtttgaaatt ctgactgctg ctgcgtacaa atattttgca tacaaagaaa
     5461 ctgacatctg cataatagaa acagggcttg gcggacggct ggatgcaact tctgccatta
     5521 gcacaaatct gctttctgtt attacatcaa taagccttga ccacacagac agactgggtg
     5581 atacgattga aaaaattgca tatgaaaaag caggaataat aaaaagcaat gcaccggttg
     5641 tgataagtgg tgaaaataaa ggttttcata caatagaaca aatcgcaaaa gaaaaaaaca
     5701 gccctgtttt gaccccgcaa aacagtgtgg agctgtgctt tgaaaacgga aaaaattacg
     5761 ctgttgtcca caacaaaaaa tacgccttca atct
//
LOCUS       DABS01000115            8419 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_19430, whole genome shotgun sequence.
ACCESSION   DABS01000115 DABS01000000
VERSION     DABS01000115.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8419)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8419)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8419
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(131..445)
                     /locus_tag="CPT85_04465"
     CDS             complement(131..445)
                     /locus_tag="CPT85_04465"
                     /inference="COORDINATES: protein motif:HMM:PF09685.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="DAB23818.1"
                     /translation="MSDEKLCIGVSTLGAILLGFIAPLIIYLTKKEQLTEPSKSLVIG
                     ALNFEITLAIVSIIVSLIPFIGLLFVLLIALFNCIILIIAFVAGNKGNEYKFPLTYNF
                     VK"
     gene            complement(509..>1411)
                     /locus_tag="CPT85_04470"
     CDS             complement(509..>1411)
                     /locus_tag="CPT85_04470"
                     /inference="COORDINATES: protein motif:HMM:PF08148.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23819.1"
                     /translation="ELNNVINGIKEFKCPFGRTTADMFEYNKLKNIYVEQRKTAKVLR
                     KQMNKKNAENVDYVRDFEIKTKELLHKVHSYQCETCKLYRKHIKETELLDRFQKRAMK
                     LEKTIEYEKDIYWRIFLNHVGVLNKMGYIENNYPNEKGMTTAAIRAENELFLSEIIVS
                     GVLDTLKPDELASVICAITTEDLRADVYPEIPISKGTRKALNRIKDIRRRLTIIQRDF
                     DIETPMYINSYYSPLIEYWVNGGEWDELIEQIPAGEGDVVRCFKRTIDVLRQLTVVPN
                     VSQELVETARAAIDAINRQPIDID"
     assembly_gap    1412..1445
                     /estimated_length=34
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<1446..2831)
                     /locus_tag="CPT85_04475"
     CDS             complement(<1446..2831)
                     /locus_tag="CPT85_04475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016952053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="DAB23820.1"
                     /translation="MSEEKQCDYSFNFKLDDFQEEALFHINNGKSVVVCAPTGAGKTC
                     IAQMAIHKALKEGTRIFYTTPLKALSNQKFMDFGAKYGTDRVGLLTGDTSINRNAQIV
                     VMTTEVFRNMLYGTNFGSVSDNLKDVRYVVLDEVHYMNDEQRGTVWEESIIYCPTNVQ
                     IIALSATVANSQQLTDWINTVHSRTELVYTDFRPVPLRYYYYDSSKPNDILPLLTPEG
                     RLNKKIKPESKAKHFGRKGKTPQRQVAKDVVSILHKKNMLPAIYFTFSRKKCDEQMEK
                     CSGLCLTTPDEQKEIKRIVDEYLAENPYLYNNKHLEYVLCGVASHHAGLLPGWKVLIE
                     KLFQKGLIKVVFATETLAAGINMPARSTVISAVSKRTDSGHRMLTPSEFLQMSGRAGR
                     RGMDEIGYVTVVGTAFQSPEEVAELVTSDANPLESRFTPTYSMVLNLLQRFNLEEAKE
                     LILKSFGYYTST"
     gene            2979..5777
                     /locus_tag="CPT85_04480"
     CDS             2979..5777
                     /locus_tag="CPT85_04480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011343110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="DAB23821.1"
                     /translation="MIDLLLKLLGDPNANKVKKMMPIVEHINKLEPEMEKLTDDELRA
                     KTQEFKEHLKNREYSSDFKKDRALEKKALDEILPEAFAVVREAGKRVLNMRHFDVQLI
                     GGIFLHNGHIAEMRTGEGKTLVATLPAYLNALTGKGVHVITVNDYLAKRDSEWMGKIY
                     KFLGLSVGVILANQERGLDDFERKKAAYECDITYGTNNEFGFDYLRDNMAGSMEMLVQ
                     RPYNYAIIDEVDSILIDEARTPLIISGRLEQSAQLYQTMSKIAPQLKKDVDYEVDEKN
                     KNVILSEEGIDRAEQLLGIEDLFDVSNQYAHHLLQALKAKELYQKDTDYVIKNGEVVI
                     VDEFTGRLMDGRRWSDGLHQAVEAKEGVKIQDETQTLASITFQNLFRLYPKLSGMTGT
                     AMTEEAEFGKIYNLEVTTIPTNKPDIRINLPDVVYKSQKQKYLAVVDEIAQMHEQGRP
                     VLVGTISIDKSEYISELLKKRGIKHNVLNAKHHEKEAYIIAQAGRFGAVTIATNMAGR
                     GTDILLGGNAEYLAKDMLDSKGITPESPNYETERDAALKEAKTITEAEHEKVVQAGGL
                     HVIGTERHESRRIDNQLRGRAARQGDPGSTRFFLSLEDDLMRIFGGQHIINLMNTLNV
                     EEDMAIESKLITRQIQASQRKVETYHFDIRKSVLEYDDVMNVQREKFYQQRRRVLKGE
                     DLTPDIYYMIEKEMDRIIKSYISPGQNPQEYIYEDMLGMVKEVHSLIPQLSYLEVNDI
                     QGLSYESIFEKFKKLAIDAYREHEENTIRFYNDIQQQYEEVFVPEEPFSHKNVMRNIE
                     KDILLRVVDNKWIDHLHNIDMLRDGIGLRAYGQKDPLIEYKREAYDLFNNMMYEIQSE
                     TVKYLFRTRFGVQIVNRKDDEVIQTQLSQAAQEFKAPSEDEEPSHAPVQKGDKIGRND
                     PCPCGSGKKYKNCCGKDL"
     gene            complement(5800..6411)
                     /gene="maf"
                     /locus_tag="CPT85_04485"
     CDS             complement(5800..6411)
                     /gene="maf"
                     /locus_tag="CPT85_04485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013852463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation protein Maf"
                     /protein_id="DAB23822.1"
                     /translation="MKDLLNKKIVLASQSPRRHSLIKKLDVDFDVVSPSFDEKLDSDN
                     YTDDAIKSLSLKKALSVLENSQDTDICACNKYKDCLIISADTMVVLNNKIYGKPKSEQ
                     RAKQMLTELSGQKHFVVTAVTVLDADTKQSITEVVKTYVTFQDLSQELIDSYVTTNKP
                     LDKAGAYGIQEMGSDFIKEVDGDLENVIGLPTKTLRKILEEFS"
     gene            complement(6449..6688)
                     /locus_tag="CPT85_04490"
     CDS             complement(6449..6688)
                     /locus_tag="CPT85_04490"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23823.1"
                     /translation="MAVGPRDYIDQLLVKKYADEKVDNPQIAKMVEPEKMMNAMGDFS
                     DMRKNMMLLNNKLNSVCAALNAKAAQYRCSRFATA"
     gene            complement(6851..7603)
                     /gene="map"
                     /locus_tag="CPT85_04495"
     CDS             complement(6851..7603)
                     /gene="map"
                     /locus_tag="CPT85_04495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012748901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="DAB23824.1"
                     /translation="MAVHKKSREEIKLMKEAGNIVALVHQEMKRIIEPGVSTKYLDDA
                     AMRIIKEHKAIPTFLGYNGFPASICASVNGEVVHGIPRESCILKEGDIVSIDVGATYR
                     GLVGDGAWTYPVGEISDECKMLLETTERALMAAISVMKDNTLLDDVSGAVEDVAKEKG
                     LGIVRQYGGHGVGRQMHEEPFVFNYRVGNKFVIKNGMTIAVEPMLNLGGDDVHTLEDD
                     WTVVTNDGKPSAHFEHTIHVTDGEAEILTKLL"
     gene            complement(7620..8273)
                     /locus_tag="CPT85_04500"
     CDS             complement(7620..8273)
                     /locus_tag="CPT85_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011344250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="DAB23825.1"
                     /translation="MKKELIFMGPPASGKGTQTKKLAADTGFIHVDTGSLLRAAMAEG
                     TEAGKIAKDYVEKGALVPVEVVAQIIKDRLSQDDVQKGFILDGFPRSIEQANMLDEML
                     KEIDAGKEVSTKVIYFDVPIENLMERIIYRRSCPKCGAIYNLKTMPIKQEGICDACGG
                     ELVQRKDDTEEIAKNRFDTYFAQTAPLIDFYEKRGILKKIDATGSVDEIYAKLKEII"
BASE COUNT         2550 a         1699 c         1517 g         2619 t
ORIGIN      
        1 ccaaaattac tttaatcata tactcactcc gttatgttaa aactattatt gatacttaaa
       61 attatacact atcagataac aaaaagactg tatttttgat acagcctttt taaaaaataa
      121 ttaaaatatc ttacttaaca aaattgtaag taagagggaa tttatattca ttacctttgt
      181 tgcctgcaac aaaagcaata ataagaataa tgcagttgaa taaagcaatt aacagaacaa
      241 acaacagccc gataaaagga attaatgata caataatcga cactattgct aatgtaattt
      301 caaaattcaa tgcacctata acaagacttt ttgaaggttc agtgagttgt tcttttttgg
      361 tcaggtaaat aatgagaggt gcaataaacc ctaacaaaat agcaccgagt gtggacacac
      421 caatacaaag tttttcatca gacatagtaa atctccttca taataatcac cgaacaataa
      481 tagcaaattt tttattacta atcaattatt aatctatgtc tataggctgt ctgttaattg
      541 catcaatagc tgctcttgca gtttcaacaa gctcctgtga tacgttgggg acaactgtca
      601 attgtcttaa aacatcaatt gttcgtttaa aacatctgac aacatcacct tcaccggccg
      661 gaatctgttc aataagctca tcccattctc cgccattgac ccagtattcg attaaaggcg
      721 agtaataaga attaatatac attggtgttt caatatcaaa atcccgctgg ataatggtta
      781 atcttcttct gatgtctttg attctgttaa gcgcttttct tgtacctttg ctgattggta
      841 tctcggggta tacatcagcg cgcaggtctt ctgttgttat tgcacagatt acagaagcaa
      901 gctcgtccgg cttcaacgtg tctaaaactc cgctgactat tatctcggat aggaaaagct
      961 cgttttcagc tcttattgca gctgttgtca tacctttttc gttgggataa ttgttttcaa
     1021 tatatcccat tttgttcagt acaccaacgt ggttgaggaa gattctccag tagatatctt
     1081 tttcgtattc aattgttttt tcaagcttca ttgcacgttt ttggaacctg tctaagagct
     1141 ctgtctcttt aatgtgtttt ctatatagtt tgcaagtttc gcactggtat gagtgcactt
     1201 tgtgcaacag ctcttttgtt tttatctcaa aatctcttac ataatcgaca ttttcagcat
     1261 tctttttgtt catctgcttt cttaaaactt ttgcagtttt tctttgttca acgtagatat
     1321 ttttgagctt gttgtactca aacatgtctg ctgttgttct gccaaacggg catttaaact
     1381 cttttatccc gttaattaca ttgttgagct cnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1441 nnnnntgtcg aagtataata accaaaactt tttaaaataa gctcttttgc ttcttcaaga
     1501 ttaaaccttt gtagcaggtt caaaaccatt gaatacgtcg gcgtgaatcg gctttctaac
     1561 ggatttgcat cacttgtaac aagctctgca acttcttccg gcgactgaaa agctgtgccc
     1621 acaaccgtaa catagcctat ctcatccatc ccccttctgc cggcacggcc tgacatctgc
     1681 aaaaattcgc ttggtgtcag cattctgtgg ccggagtctg ttctttttga aacagcggaa
     1741 attactgttg agcgcgcagg catgtttatt ccggcggcaa gggtttctgt tgcaaaaacc
     1801 actttgatta aacctttttg aaaaagcttt tcgattaaaa ctttccaccc tggtaaaagt
     1861 ccggcatggt gagatgccac cccgcacaag acgtattcaa ggtgtttgtt gttgtaaagg
     1921 tacgggttct cagccagata ttcgtctaca atccttttga tttctttttg ttcatcgggc
     1981 gtggtcaggc acaggccgga acatttttcc atctgctcat cgcatttttt gcgcgaaaac
     2041 gtaaaataaa ttgcaggcag catgtttttt ttgtgcaaaa tagacacaac atcttttgca
     2101 acctgtcttt gcggggtctt gccttttctg ccgaaatgtt ttgctttaga ctcgggctta
     2161 attttcttat tcaatctgcc ttccggagtg agcaggggca aaatgtcatt gggctttgaa
     2221 gagtcgtaat aataatatct caaaggcacc ggtctaaaat ctgtgtatac aagctctgtt
     2281 ctagaatgta ctgtgtttat ccagtctgtg agctgctgtg agtttgcaac tgttgctgaa
     2341 agagctatga tttgaacatt tgtggggcag taaataatgc tttcttccca tacagtgcct
     2401 ctttgttcgt cattcatata atgaacttcg tcaagcacaa catatcttac atcttttaaa
     2461 ttgtcagaaa ccgaaccaaa attggtaccg tacaacatgt ttctaaaaac ctctgttgtc
     2521 ataaccacaa tctgtgcatt gcggtttatg gaggtatctc ctgtcaaaag tccgactctg
     2581 tctgtgccgt attttgcacc aaagtccata aacttctggt ttgacaatgc ttttaaaggg
     2641 gttgtgtaaa aaatccttgt accttcttta agagccttat gtattgccat ctgtgcaata
     2701 caggtttttc cggcacctgt aggcgcgcat acaacaacac ttttaccgtt gttaatatga
     2761 aaaagagcct cttcttgaaa gtcatccagt ttaaaattaa agctgtaatc gcattgcttt
     2821 tcttctgaca taccaattcc aaatttgtct acatatacat aataccctaa aatacatatt
     2881 tatacacagg ggctaattct ctttgtcata tgttcatttt gccgtgcgcg tgttagaatc
     2941 aatatagcga aaaaaagact atggggaatt ttcatataat gattgattta ttactaaaac
     3001 tgctgggtga tccaaatgct aataaagtaa aaaaaatgat gccgattgtc gagcacataa
     3061 acaaacttga accggaaatg gaaaagctta cagacgacga gcttagggct aaaacacagg
     3121 agtttaaaga acatttaaaa aacagagagt attcgtctga ttttaaaaaa gacagagcac
     3181 tggagaaaaa agctcttgat gaaatcttgc cagaagcttt tgcagttgta agagaagccg
     3241 gcaaacgtgt tttgaatatg cgtcactttg atgtccagct gattggcggt atttttcttc
     3301 ataacggcca tattgcagag atgagaacag gcgaaggtaa aacccttgtt gccactttgc
     3361 ccgcatacct caatgccctg acaggaaaag gcgtccacgt tatcacagta aacgactacc
     3421 ttgcaaaacg cgacagcgag tggatgggta aaatctacaa attcctcggc ctgtctgttg
     3481 gcgttattct tgcaaatcag gaacgcggtc ttgatgattt tgaacgcaaa aaagctgctt
     3541 atgaatgtga tattacctac ggaacgaaca atgaattcgg ttttgactat cttagagaca
     3601 acatggccgg cagcatggaa atgcttgtgc agcgcccgta taactatgcc attatcgacg
     3661 aagttgactc tatcttaatt gacgaagcaa gaactccttt gatcatctcc ggccgtctgg
     3721 aacaatcagc ccagctttat caaacaatgt caaaaattgc accgcagctc aaaaaagatg
     3781 tggactacga agtggatgaa aaaaataaaa acgtaatcct ttcagaagaa ggtatagaca
     3841 gagctgaaca gcttctcggt attgaagacc tttttgatgt atcaaatcaa tacgcacacc
     3901 atcttttgca ggcattaaaa gcaaaagaac tctatcaaaa agatactgat tacgttatca
     3961 aaaacggcga agttgttatt gttgacgaat ttacaggccg cttgatggac ggaagacgct
     4021 ggtctgacgg tttgcatcag gctgttgaag caaaagaggg cgtaaaaatt caagacgaaa
     4081 cccagactct tgcgagcata actttccaga acctgtttag gctataccca aaactatccg
     4141 gcatgacagg tactgcaatg acagaagaag cagaattcgg caagatttat aaccttgaag
     4201 ttacaactat tccgactaac aaaccggata tcagaattaa ccttcctgat gttgtgtata
     4261 aatcacaaaa acaaaaatat ctcgctgttg ttgatgaaat tgcacaaatg catgaacaag
     4321 gcagacctgt acttgtcggt acaatcagta tcgacaaatc agagtatatc tctgaacttc
     4381 ttaaaaagcg cggaatcaaa cacaatgtac taaacgcaaa acaccacgaa aaagaagctt
     4441 atatcattgc acaggcaggc cgttttggag cagttacgat tgcaaccaac atggccggcc
     4501 gtggtacaga tattctttta ggcggtaacg cagagtatct tgcaaaagat atgctcgaca
     4561 gcaaaggtat tacacctgaa agccccaatt atgaaacaga aagagatgct gctttaaaag
     4621 aagcaaaaac aattactgaa gcagaacacg aaaaagttgt tcaagcaggc ggtcttcacg
     4681 ttattggtac agaaagacat gaatcccgcc gtattgataa ccagttaaga ggccgtgccg
     4741 caagacaggg tgaccctggt tcaacaagat ttttcttatc tttagaagac gacctgatga
     4801 gaatctttgg cggacagcac attattaatc ttatgaacac tcttaatgtt gaagaggata
     4861 tggctattga gtcaaaactc atcacaaggc aaatacaggc ttctcaaaga aaagttgaaa
     4921 cctatcactt tgatataaga aaaagcgtgc ttgaatacga tgacgttatg aacgttcaaa
     4981 gagaaaaatt ctaccagcaa agacgaagag tgctaaaagg cgaagacctc acaccggata
     5041 tctactatat gatagaaaaa gagatggaca gaatcataaa aagctacatc tcacccggcc
     5101 agaatccgca ggaatatatc tatgaagata tgctcggaat ggtaaaagaa gtccactccc
     5161 tcattcctca gctttcttat cttgaagtaa acgatattca aggtttgagc tacgaatcca
     5221 tctttgaaaa attcaaaaaa cttgcaatag atgcatacag agaacacgaa gaaaatacaa
     5281 taagattcta taacgatata caacagcagt acgaagaagt ctttgtacct gaagaacctt
     5341 tctcacataa aaatgtaatg agaaatatcg aaaaagatat acttttgcgc gttgtcgaca
     5401 ataaatggat tgaccacctg cataatatcg atatgctccg tgacggcatc ggtcttcgtg
     5461 catacggtca aaaagaccct cttatagaat ataaaagaga ggcctatgac ttgtttaaca
     5521 acatgatgta cgaaatccag tcagaaacag ttaagtacct gtttcgaaca cgttttggcg
     5581 tacagattgt taacagaaaa gacgacgaag ttattcagac ccagctctct caagcagcac
     5641 aggaatttaa agctccatct gaagacgaag aaccctctca cgcaccggtg caaaaaggtg
     5701 ataaaatcgg cagaaatgac ccttgcccat gcggaagcgg caaaaaatac aaaaactgct
     5761 gcggcaaaga tttgtaattt gtaaaaacat taaaaaaact tacgaaaact cttccaatat
     5821 tttgcgaaga gtttttgttg gcaagcctat tacgttttcc aaatcaccgt caacttcttt
     5881 tataaaatca gagcccatct cttgtattcc gtaggcacct gctttatcca gcggtttgtt
     5941 ggttgttaca taagagtcta taagctcctg tgataaatcc tgaaaagtca catatgtttt
     6001 tacaacttct gttatggact gttttgtgtc agcgtccaat actgtcacag ctgtaacaac
     6061 aaaatgtttt tggccgctta attctgttag catttgcttt gctcgttgtt cgctttttgg
     6121 cttgccgtag attttgttgt ttaaaacaac cattgtgtca gcacttatta tcaaacaatc
     6181 tttgtattta ttacacgcgc aaatgtccgt atcttgacta ttttcaagta cggacaaagc
     6241 tttttttaga gagagggatt ttatagcgtc gtcagtgtaa ttgtccgagt ccagcttttc
     6301 atcaaaagaa ggagagacaa catcaaagtc gacatcgagc ttttttataa gagagtgacg
     6361 cctcggagat tgcgaggcaa gaacaatttt tttgtttaat aaatctttca tagtgctatt
     6421 ctagcacgaa atctgtacag gcattaaact atgctgttgc aaaccttgaa catctgtatt
     6481 gtgctgcttt tgcatttaac gctgcacaaa cgctgtttaa tttgttattt aaaagcatca
     6541 tattttttct catatcagaa aaatcaccca ttgcattcat cattttttcc ggttcaacca
     6601 tttttgcaat ctgtgggtta tcaacttttt cgtctgcata ttttttaact aacaactgat
     6661 caatgtaatc tcttggtcca actgccatga tattttctcc ctataaaatg taatcccttt
     6721 aattccctta catatataaa caatttttct gttaaaaaat tgcctttttg aacattttat
     6781 tgttaacatt tcttcacaca aaaagagaac ccttgtaata tcaggggttc tcttttttat
     6841 acttataaaa ttataacagt tttgtaagta tttcagcttc tccgtcagta acatggatag
     6901 tatgctcaaa atgtgctgac ggcttgccgt catttgttac aactgtccag tcatcttcga
     6961 gagtatgtac atcatcaccg ccaagattga gcattggctc tacagctatt gtcataccgt
     7021 ttttgatgac aaatttgttg ccgaccctgt agttaaaaac aaaaggctct tcgtgcattt
     7081 gtctgccaac accgtgaccg ccgtactggc gcacaatccc cagccctttt tcttttgcaa
     7141 cgtcttcaac agcaccggat acatcatcaa ggagcgtgtt atctttcata acagaaatag
     7201 ctgccataag ggctctttct gttgtttcaa gaagcatttt gcactcatct gaaatttcac
     7261 cgacaggata agtccacgca ccgtcaccaa caaggcctct gtatgttgca ccaacatcaa
     7321 tacttacaat atcgccttct tttaaaatac atgattctct tggaatgccg tgtacaacct
     7381 ctccgttaac agaggcgcaa atcgaagcag gaaaaccgtt gtatcccaaa aaggtaggaa
     7441 tagccttgtg ttctttgatt attctcatag cagcgtcatc aagatatttt gtagacacgc
     7501 ctggttctat gattcttttc atttcctgat gaaccagtgc aacaatgttg ccggcttctt
     7561 tcatcagctt tatttcttca cgtgattttt tgtgaactgc catttatatt acttctttct
     7621 tatataattt cttttaactt agcataaatt tcgtcaacac tgcctgtggc atcaatcttt
     7681 ttgaggattc ctcttttttc ataaaaatcg attaacggag cagtttgtgc aaaatatgtg
     7741 tcaaatctgt ttttagcgat ttcttctgtg tcatcttttc tttgtaccag ctcaccgccg
     7801 caagcatcac aaataccttc ctgtttgata ggcattgttt taagattgta tattgcaccg
     7861 catttcgggc aagagcgtct gtaaatgatt ctttccataa ggttttctat aggaacgtca
     7921 aagtaaataa cttttgtaga aacttcttta cctgcatcga tttctttaag catttcatca
     7981 agcatattag cctgttcaat gcttcttgga aatccgtcca ggataaaacc tttttggaca
     8041 tcgtcttgag acaatctgtc ttttatgatt tgagcaacaa cttctacggg aacaagcgcg
     8101 cctttttcaa catagtcttt ggcaattttt cctgcttcag taccttctgc cattgcagct
     8161 cttaataaag aacctgtatc tacgtggata aatcctgtgt cagcagccag tttttttgtt
     8221 tgagtacctt ttccgcttgc gggagggccc ataaaaatta attctttttt cataatgtaa
     8281 ccttttttta atgtaactac catctgtctc aatattatca cgcgatataa agcagtacaa
     8341 gttttgtctg aaacgcagac atacggcatg tattacacat gtatataaaa tttatattta
     8401 gttttgtaaa acttcttca
//
LOCUS       DABS01000116           19366 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_5350, whole genome shotgun sequence.
ACCESSION   DABS01000116 DABS01000000
VERSION     DABS01000116.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 19366)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 19366)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19366
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..267
                     /locus_tag="CPT85_04505"
     CDS             <1..267
                     /locus_tag="CPT85_04505"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23744.1"
                     /translation="KTKKENLLVKRQALLDKAGCIKSDLVVNVIPEDCEDVQAWIDNY
                     KKENEILFKKESTNHGGNYKPSNTKNMNPDEVMNMFIRTAAGRR"
     gene            279..1244
                     /locus_tag="CPT85_04510"
     CDS             279..1244
                     /locus_tag="CPT85_04510"
                     /inference="COORDINATES: protein motif:HMM:TIGR01554"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="DAB23745.1"
                     /translation="MAVNAATDAKAILRTNAEALIPVEISNEIIKEVPQASKLLPLMK
                     RLPNMSASQKTIPITNALASAYFLNGETDSKKTSNAEWKKLTLTAEELAVIIPIPEAT
                     LADSAFNIWGEVKPQIVEALGIAIDQAILFGTNKPSSWPEAIVTQAAAKSHSVEIGTG
                     VDVASDIIGEEGIMAKVEADGYRVTGFIADTIMEPKLRDLRDKNNNPIYVPALTDQVP
                     DSLVGRRIAYDNTSTFDTEKALMVCGDFSKAVYSIRQDITYKVLTEAIIQNTDGSIAY
                     NLAQQDMVALRCVMRLGVQIAIPATRRKGVNGYPFAVLTPEKASA"
     gene            1299..1814
                     /locus_tag="CPT85_04515"
     CDS             1299..1814
                     /locus_tag="CPT85_04515"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23746.1"
                     /translation="MIKINENSYVTVEEADEYFETRLGADSWTEIDEQQKEKALITAT
                     KKIDRLPFIGYKKSPSQPLQFPRMYYNSCSACGLQIADIPQQLKDAVYEEALTTLQFI
                     ENNSQEVYNGAVESSYQSLKLGDASITYGSKSSTSTSNSGLLSKNAGDLLQGLIKVGF
                     DISNPVFYEVY"
     gene            1814..2395
                     /locus_tag="CPT85_04520"
     CDS             1814..2395
                     /locus_tag="CPT85_04520"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23747.1"
                     /translation="MFKEPYAKLLRQKSYREALLEELKKLDREVISAGIHKSDGAKVV
                     GSDGVKLIDIAVQNHYGNEWIMPRTVRFQKNGKWFAIKKDTHIKIPATRFVSRLIENQ
                     QERVRLLEEVQANLHIQFSNANRFGEIKISDTVKNIGQYMKNRIKSYIDDRVFETNAP
                     MTVEAKGFDQRLKDKGLLYESIDWRSKKQRKHS"
     gene            2396..2761
                     /locus_tag="CPT85_04525"
     CDS             2396..2761
                     /locus_tag="CPT85_04525"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23748.1"
                     /translation="MSRAKFLIKKMGGKIYDIFSETITIDPDTGADNVKYSKTDSVLA
                     YIQPTGSGGSVKGIVLQDNRSGDSKISDFFMYHEKILKEHDRVFYGKYWYEIRAIEPW
                     ESSFMKFYKSYLVKVDGQK"
     gene            2758..3312
                     /locus_tag="CPT85_04530"
     CDS             2758..3312
                     /locus_tag="CPT85_04530"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23749.1"
                     /translation="MKIEEAKKIIYIFFKNRVSADYPQYFGLTDNASDKIFWSKVKQS
                     MPQKPYIMLSEASVSKLYKRFETFHENGQDFVRKEMRLLVTFGVYTLNSDGNLVEADN
                     LATELVEYIQDLFTETQNTFDTLSAQGITVNELVSSDIRDLSQFSQTNQEFRKEIDIA
                     FEYEDIQTYTPELGQDLDMEISNK"
     gene            3402..4544
                     /locus_tag="CPT85_04535"
     CDS             3402..4544
                     /locus_tag="CPT85_04535"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23750.1"
                     /translation="MSVYDNLISILFKLPDGRSLNEYYKNVLLVGKITEDDLQTDVEF
                     PSGGVGKYSSYDEVIAVFKPTSQFAIEANAVFNQKSNSQTTSQIQYLMIAKQDDSGAL
                     ADALNRAKASDGRFAKVVPVSRVAADLKAVADWCLTNKRFCDLPVTDVDDVAEIVAGG
                     NDYAYGVFSKSATNPIASAVASTSTCGYFGGKDGSAQFTQLTGILPEVYTGEEISEMN
                     TNNVAYYTNVSPIDGGQTEGFGYNWIIGSRMLGGELRQRQMIKDYIEKDMGLMALEFF
                     NQKPVYDETGNNLLLTMAQKRFRSYQTYNLVIETNNEQTGFELKVIPIRTGADSIMNT
                     DVEAYNAKKFKLQGYYYDAIVGEKVDFLFYVDPSDEQVEQILGEDE"
     gene            4544..4924
                     /locus_tag="CPT85_04540"
     CDS             4544..4924
                     /locus_tag="CPT85_04540"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23751.1"
                     /translation="MAVYDAKNIQFVWRGLTLTGTGDDHAYNITQQNDSFTPYKGVQA
                     EGLNIVNNQRQWQITRTFKADSVSLPILIQDNLNNVEDTLVVRDLNTGITDTFTDCVI
                     LNISGEQDSGTRTVTWNALYRNGK"
     gene            5138..5656
                     /locus_tag="CPT85_04545"
     CDS             5138..5656
                     /locus_tag="CPT85_04545"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23752.1"
                     /translation="MFIITYFKQKTSEVIMIECTVNGHKYTTAPLYFEDFTTLGFMTE
                     EKVYPFLTCLTACIANNLSDAELLKALYTSCKDIFNREDLKFISNLVLNREHMTIDGK
                     KPDQAAWEKHWQEVGFMDYRVVVFHFMRQNLGNFSSLSALLPDGWTDKMKQQIEKKLS
                     TLFTNLSEQIQK"
     gene            5575..5826
                     /locus_tag="CPT85_04550"
     CDS             5575..5826
                     /locus_tag="CPT85_04550"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23753.1"
                     /translation="MDGQNETANRKEIINSVYKLKRTNTKIKADSVKNTMNLFMANKQ
                     LGFGVNLEELKRMTPQEAYLFGQQVAEALRQLEIERLAR"
     gene            5826..7274
                     /locus_tag="CPT85_04555"
     CDS             5826..7274
                     /locus_tag="CPT85_04555"
                     /inference="COORDINATES: protein motif:HMM:TIGR02675"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23754.1"
                     /translation="MAIDELLVKLVSKLDDKGFKELDKLEKKADKQTRILSASLRNMF
                     VGVIGNIGVKEIVDASVKLDSLKTSFAALAGSDAGGSEQLKYLREETQRLGQDFVTAA
                     EAYKNLFSAGRGAGMNPDEIQQIFSSVLEAGTVLGSSQQQMQGALMALEQMISKGKVS
                     MEELRRQLGNALPGAMQIAARAMHTTSEGLQEMLEAGLDSQKFVTAFANQLHYEFGDK
                     AVNASHTLRAELARLENAVFDLKTSFLDGDAGTDLGKVIVQVTKILQSPGLKQSLNVV
                     GKLTVFLLKNIRLIAGTIVIIGIRRLISTLALLRLELLTTTFAAGSLGAAMQLFVGGN
                     IIAGIRAITAAMWATLRPIALWVAGLLLVIELIDTLRGKKTALGEIVESTPTVKEAIG
                     SEKFQRKWVDIKKIFGFQKEVPVLQDSGMYNKDGSLKSRNNISMQLNQGAIQINTQST
                     DPQATREAVKTAMFDVFEAIRIRNGYPQTEVV"
     gene            7380..7958
                     /locus_tag="CPT85_04560"
     CDS             7380..7958
                     /locus_tag="CPT85_04560"
                     /inference="COORDINATES: protein motif:HMM:PF13411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23755.1"
                     /translation="MNDKYHIAFNTNYVSSLTGASISQLNSWDRDNIVSPSILKSEGR
                     GSIRMYSFKDIVEIRTVKYLRDNQVPLKEIKRAIDYLRNSLNFDKPLSELVLIASNHN
                     ILCTPQGNINDITSQWLAANKYGQLVMSFMVPLGAITKDLDEAITKYTKRIDEAEEEE
                     KNGTLIPLSNIEEKLFGVSGSNNKKRGKRRPA"
     gene            7990..8196
                     /locus_tag="CPT85_04565"
     CDS             7990..8196
                     /locus_tag="CPT85_04565"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23756.1"
                     /translation="MQNIFKKLQSNPYITSKSKTGDLQSHRAVNWNNGYRVLFKIDEE
                     KKQVIIVAIDSHDNAYKKAKKRNN"
     gene            8206..9222
                     /locus_tag="CPT85_04570"
     CDS             8206..9222
                     /locus_tag="CPT85_04570"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23757.1"
                     /translation="MTYAAIYIKKDNKVVNPVDAVQSAGIKAELSQAFSNAKTSLQNF
                     DLSKMAQNINLQSATEFTQKYAVGALTMIINQRPVTNQMMLDSLFNGLAPALNLTAAQ
                     AGFNSIMEMKSAIESGNINVANFMQGLENGLDVVTGTITGSQDYSKYGEEIPIDLTSN
                     ITRTYIAETPDRRVQSGQTYNEYVHNLPLVLPFSGIVKDGLNYTADEFADRLEEIMYS
                     KEPFTFRAGEKIFENYVFTSFTPKRETENGVQFDAEIKFMEEGEVEYVKVNIAQQSTA
                     KGTGAGLRKQVTNTKKGQSVKNNTSPQKYAGAVGFVNSILGGDGVTVLPLLNSITNNL
                     NSYK"
     gene            complement(9213..9587)
                     /locus_tag="CPT85_04575"
     CDS             complement(9213..9587)
                     /locus_tag="CPT85_04575"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23758.1"
                     /translation="MRAWXNKPCEIRVEDSDVWLDIESKTYQIRMKNVEILKQITEED
                     KSVVGRALVGGLVFGVVGAVVGGMSGIGTKEHKDYCLKITTESYELFFKHIEGYEFDF
                     GSCYQKLKNMLPEATPPETDYL"
     assembly_gap    9574..9575
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(9711..10232)
                     /locus_tag="CPT85_04580"
     CDS             complement(9711..10232)
                     /locus_tag="CPT85_04580"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23759.1"
                     /translation="MIDIRYALVLIIGILCIILGFLSGYFFNRITKNIQQFLKRENDE
                     KKGTQNSIEDKKLINARELIDDLKKGKNVVGKNNKQLLKGLKMIAKEPDWENKIDSAT
                     LEILSNLNIKRKLIEKNRIASGNNTVKIDKKHSHVRNEEDQQVEYVTESYWYNPEDGS
                     FDINENQNIEEDD"
     gene            complement(10225..10461)
                     /locus_tag="CPT85_04585"
     CDS             complement(10225..10461)
                     /locus_tag="CPT85_04585"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23760.1"
                     /translation="MKKLIVIFCIMCFALPCCAAVKRDKYGRKVGSYEKQSNGYVVKK
                     DKYGRKTGSFKKNNDGSITEYDRYGRKIGSWKND"
     gene            10542..10856
                     /locus_tag="CPT85_04590"
     CDS             10542..10856
                     /locus_tag="CPT85_04590"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23761.1"
                     /translation="MNTFTLPDINTNPDIRVSYTINNQSYMFHFQWCDSFCLLDIYMI
                     QDNENVYIAKGEPLVPGRNLIARADMQGSLMLVNKYGQNAELLQENFSTDFVLVYIAD
                     FA"
     gene            10974..11888
                     /locus_tag="CPT85_04595"
     CDS             10974..11888
                     /locus_tag="CPT85_04595"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23762.1"
                     /translation="MAYNKLKFNIMLQVAGADLSIQDLDIDFDVYKNNKSENNKSTIT
                     IWNLNDTTYQRLLEKTYAVDLYTWYGDDEPSLMFRGFVDKDKTSKRNINGRINTAKGF
                     LESPVRQDIKGSFDIPTIIELVDGHVAYTQTKINKDYRTKVTSTQILKDCIEAMGVGT
                     AKFSDKLPVKEYPTFKAVGAPQAVMQQVCKPLGIKFNISNGLIQVVAPDEEFNGEFAI
                     LLNRENSMRPDRVGENELVISTRLIPSLNPYDWVQCDFNEFSGVESVRQVHSKGNNYG
                     TQGSTEIIIGFDKLKKKTKRKKKKTENL"
     gene            11885..12472
                     /locus_tag="CPT85_04600"
     CDS             11885..12472
                     /locus_tag="CPT85_04600"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23763.1"
                     /translation="MRDCNDSFNDILDGFSNATLVEKPCKIVKVNSQYCVDVEYYDNN
                     EPYYLYNVPVKHLQTQSAFVFLGLKAGDCGTVRFFDNDVTGYYADDEYVSDETRSHDI
                     NDNLFSFGFYPALSQYVFPHGDVVIGTTSGAVVNLTAAGISISGGDVSITGSGNITIS
                     SSSVSIGADTTIDGKKFLEHTHSNGNQGNPTGGVI"
     gene            12473..12817
                     /locus_tag="CPT85_04605"
     CDS             12473..12817
                     /locus_tag="CPT85_04605"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23764.1"
                     /translation="MTDILMKNNRLPMYNGDFVLTNATDEIKQHIATALNTFYTDWLL
                     DFTKGIDYAYGLRHEEFLRHDIKNQILGVEGVVALSAFSMKFDKTNRSWQVTAAVKTI
                     YGKVEINEYIQQ"
     gene            12897..14060
                     /locus_tag="CPT85_04610"
     CDS             12897..14060
                     /locus_tag="CPT85_04610"
                     /inference="COORDINATES: protein motif:HMM:PF04865.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23765.1"
                     /translation="MKIDEKGIVLSTLNDILDAYELRYQSKYGADFYIKPEGVIDNIA
                     QSSGFMEMSLQEQIAFLGKQFDPETAEGVWQDKLYERINLYRLEAQSTVFTKGIIGTP
                     GFSAEAGSVTIRLEATGDEFVNSEAFTIEDSGTANIRFECVITGVIPVNAADTFQIVE
                     APNEITAISQEDATDIATGRERESDDEFRIRYRTAKAINAKATRNANIANLSKYVDNI
                     AFLKIFDKKTDYTMEAGTLLVIAKHNTTDAAFANAVFESVTDGIDLLGDDTQVVKDRA
                     GQDVTINWKNADEIQIDITGTIKVRDGYYPNTVIANAKQSILAYIEKRVFGLESIIYA
                     TEFIIPVLQTDGVEAVIGIQIKKHDDEEFTDSVSLSREEVPEFALERISLTEQ"
     gene            14146..14730
                     /locus_tag="CPT85_04615"
     CDS             14146..14730
                     /locus_tag="CPT85_04615"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23766.1"
                     /translation="MKTFNYQIEALKYVLPYLRANEDVAVVLKAIGDRFNNLQTAIVY
                     LLDTLDIRKARGTWLDYAGAEVGAQRDEMDFGDYFCVNRLHINVAKRFYFLTSGLDPE
                     TPLSLNDAEFIQKIFAYIGANSSCGTRNEIIDIVKTITNAQKVIVQKTGRCVLKIDLT
                     GDSLIITQNTVNYIQQIIGDGIYLEEITLNGKTN"
     gene            14714..17311
                     /locus_tag="CPT85_04620"
     CDS             14714..17311
                     /locus_tag="CPT85_04620"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23767.1"
                     /translation="MAKPTEPNISIPQGFANEGQKTDFLEEKIQKGFDPVDPDVLAGD
                     NLNKFIDDTYKGLNYTIDSVNDLYKGAVLYDVRENYSSTSIVFNIEDDGIFIYKSLTD
                     DNLGNPLSDETKWKKVDLGDGGGGDTGGGFSLFDVVEKDHILSFEESMGFGLLGTYVY
                     KEPVAGSRYGYPDFYNECVAQKSTEGNTLLALKNNVEIVGSPVVNNGVLSGFSTSSYA
                     TTLTFPTDEDFDFQFKLKTGADISGEQEIFACPTASGPSQYYFCLVNLESNNLNVIFN
                     GGLGVWQYPFGTPAQPETDYIVKVVYSKTNNTLHVTMSLANGTVLLDDTKQVDELYDI
                     KEAVIGTGKDNAVTIFNPFKGSVDLKECYIESNGQRIWSGASIATKNPNGHIFYDIAD
                     KATVDEIFSQRGEAWFYGVDTENERIFLPRGTRSQYTVNTDETGDYVEAGLPNITGTM
                     VGDISEGVATGALKIDTIYSGAMWQGSVNVARMRNWSLDASLSNPIYGKSDTVQPYAT
                     KKLLYIVVGNVKVQSAASDVVDVTTTENDTVPLFTGQYFNFKPNNPSWLKAGEQQDSG
                     GIYTSCYNKLVQALTDNIWEIKVIDSTAMEEGTDYSEYWIVYQDAMRFRTPLTACKEI
                     MPGNEITSSLGFSSNPTNTVESYTVPYNGYITIIGYKTSTSNTLTVKLNGTIVSQTRA
                     LASGLSSESYFFARKGDIVTVSTDSTSTGWVIATQTITKATANGELYFKAASAVENIE
                     ILNVGQVMEELSNKVNVSNTSWAINACMPDYTAQTTFTLPDIGQTFTAPYDCLLFVSI
                     FNAGAGNFELRYNNSNGGLIMFGAAGSNQVHVSQTAYLKKGWQIYRGGQIGYNQCYIT
                     PLIGAEGAN"
     gene            17311..18063
                     /locus_tag="CPT85_04625"
     CDS             17311..18063
                     /locus_tag="CPT85_04625"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23768.1"
                     /translation="MIKYAKVINEQTGLCEVGIGTNSKFYKSIGMKEQDVSQSDIDGK
                     WYLSDKCPMKSNETKLAEAKQAKLNEASNKAFEYRDKTGTVSFDGRPVEPIMPMTEGE
                     EPPATITVHTELLNQDDMFQRVIGFQQGIFTQDQIYNTKEDIPVYLNAQEAQAVYFAI
                     VARAQKLWVQDYMTYKSMIEACTTAEEVNAIVIDYDNVPVIQEPEAPEEPTEETTEES
                     SDVEEEHENKPDKTTPDTGVQEVQEDTAGETE"
     gene            18063..18359
                     /locus_tag="CPT85_04630"
     CDS             18063..18359
                     /locus_tag="CPT85_04630"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23769.1"
                     /translation="MEKFIEYAPSIIVVIAFAAAYKVFATPKQLAELKSQLIEYISEH
                     YVSEKSCDSCTKHIDGTLKTVTESIQKLDEKLDMKIDKVTELIERRIEQAERGH"
     gene            18359..18841
                     /locus_tag="CPT85_04635"
     CDS             18359..18841
                     /locus_tag="CPT85_04635"
                     /inference="COORDINATES: protein motif:HMM:PF01510.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23770.1"
                     /translation="MNKIIIHWTAGTYQPNTTDLEHYHFLIDGEGKKHNGKYKPENNE
                     NCNDGKYAAHTGGGNTGAIGVSMCAMAGFNSAASCGNYPITPVQLEACFKLCAELCKK
                     YNIPVENVWTHYEFGINHPDTTSHGKIDIIYLPPYPLVKRNEVGGFIRSKIRWYLNKL
                     "
     gene            18820..19041
                     /locus_tag="CPT85_04640"
     CDS             18820..19041
                     /locus_tag="CPT85_04640"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23771.1"
                     /translation="MVFEQVIKRKAEKMKWYEFFLNYLTQASTYKGIFTMLAAFGVVV
                     SDGLTQAIIAVCVAVFGLVDVIIDERAKK"
     gene            19043..19273
                     /locus_tag="CPT85_04645"
                     /pseudo
     CDS             19043..19273
                     /locus_tag="CPT85_04645"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    19061..19070
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         6601 a         3560 c         4042 g         5151 t
ORIGIN      
        1 aaaacaaaga aagaaaatct tcttgtaaaa cgtcaggcat tactggacaa agcaggctgc
       61 ataaagtccg atcttgtcgt caatgtaatc cccgaggact gtgaggatgt gcaggcatgg
      121 attgacaatt acaaaaaaga aaatgaaatt ttattcaaaa aagaaagtac aaatcatggg
      181 ggtaattata aaccctctaa tacaaagaat atgaatcccg acgaggttat gaatatgttc
      241 atacgcacgg cagcgggcag aagataagga gataaaatat ggcagtaaat gcagcaactg
      301 atgctaaagc tattttgaga acaaatgcag aggcattgat acctgttgaa atatcaaacg
      361 aaataattaa agaagtaccg caggcatcca aactcttgcc tttaatgaaa agattaccaa
      421 atatgtctgc ttcacaaaaa actattccta ttacaaatgc actggcaagt gcatactttt
      481 tgaacggcga aacagattcg aaaaaaacat caaatgccga atggaaaaag ttaactctga
      541 cagcggagga attggctgtt attatcccga ttcccgaagc tacacttgca gattcagcat
      601 ttaatatttg gggcgaagtt aaacctcaaa tcgttgaagc attaggtatt gcgattgacc
      661 aggctatttt gttcggtaca aacaaacctt cttcatggcc tgaggcaata gttacacagg
      721 cagcagccaa aagtcattct gttgaaatcg gtacaggagt agatgtagct tctgatatca
      781 tcggcgaaga aggtattatg gcaaaagtcg aagccgacgg atacagagtt acaggcttta
      841 ttgccgatac aattatggaa ccaaagctta gagatttgag agataagaat aacaatccta
      901 tctatgttcc tgctctaact gatcaggtgc ctgattcact tgtcggcaga cgtattgcat
      961 atgacaacac aagcactttt gacacagaaa aagcattgat ggtatgcggc gatttttcaa
     1021 aagctgttta ctcaattcgt caggatatta catacaaagt gttaacagaa gccatcattc
     1081 agaatacgga cggctcaatc gcctacaacc ttgctcagca ggatatggta gcattgcgct
     1141 gtgttatgag acttggtgta cagattgcaa taccggcaac aagaagaaag ggtgtaaacg
     1201 gttacccgtt tgcagttttg actccggaaa aagcttcagc ttaattatta taagggcagg
     1261 ttgttcaaca gtctgcccgg cttttttaag gtaaaactat gataaaaatt aatgaaaaca
     1321 gctatgtaac agttgaagaa gctgacgagt attttgaaac tcgcctgggg gctgattctt
     1381 ggactgaaat tgatgagcag caaaaagaaa aagccttaat tacagccaca aaaaaaatag
     1441 acagactccc ttttatcgga tacaaaaaat caccttcaca gcctttgcag tttccaagga
     1501 tgtattacaa ttcctgctca gcttgcggct tgcaaattgc agatattccg cagcagctta
     1561 aagatgccgt gtacgaagag gcactgacca cgctgcagtt tattgaaaat aattcacagg
     1621 aagtctacaa cggagcagtt gagagcagtt atcaatcgtt aaaactcggt gatgcttcga
     1681 taacctacgg ttctaagtct tcaacaagca cctccaacag cggtcttttg tctaaaaatg
     1741 caggagattt actgcaagga ttgattaaag tagggtttga tatttcaaat ccggtatttt
     1801 atgaggtcta ttgatgttta aagagcctta tgcaaaatta ctcagacaaa aaagctatcg
     1861 cgaagcacta ttagaagaat taaaaaaact cgacagagaa gtcatttcag ccgggataca
     1921 taaatcagac ggagcaaagg ttgtcggttc tgatggtgtg aagcttattg atattgctgt
     1981 tcaaaaccac tacggaaacg aatggataat gcctcgcaca gttcgttttc aaaaaaacgg
     2041 caagtggttt gcaattaaaa aagacacgca tataaaaatc cctgcgactc gttttgtttc
     2101 aaggctcatt gaaaatcagc aggagcgggt caggcttttg gaagaagttc aagcaaactt
     2161 gcatattcag tttagtaatg ccaacagatt cggagaaatc aaaatatccg atactgtaaa
     2221 aaacatcggg caatacatga aaaatcgcat aaaaagctac attgatgaca gagtctttga
     2281 aacaaacgca cctatgacag ttgaggcaaa aggatttgac caaagactaa aagacaaagg
     2341 attgttgtat gaaagcattg actggcgctc aaaaaaacag agaaagcatt cataaatgag
     2401 cagagcaaag tttttgataa aaaaaatggg agggaaaata tacgatattt tttccgaaac
     2461 aataactatc gacccggata ccggtgcaga caatgttaaa tattccaaaa cagactctgt
     2521 tcttgcttat attcaaccga caggctcggg cggcagtgta aaaggcattg ttttgcagga
     2581 caaccgaagc ggcgacagca aaatttcaga ttttttcatg taccacgaaa agattctgaa
     2641 agaacacgat agagtttttt acggtaaata ctggtatgag ataagggcta ttgagccttg
     2701 ggagtcttca tttatgaaat tttacaaaag ctatttagtg aaagttgacg ggcaaaaatg
     2761 aaaatagaag aagcaaagaa aataatttat attttcttta aaaatcgtgt ttctgcggat
     2821 tacccgcaat actttgggtt aactgacaat gcttcggaca agattttctg gagcaaagtc
     2881 aagcaaagta tgccgcaaaa gccttacata atgctttcgg aagcttctgt gtcaaagctg
     2941 tataagcgtt ttgaaacctt tcacgaaaac ggtcaggact ttgtgcgcaa ggagatgcga
     3001 cttcttgtta ccttcggtgt ttatactctt aacagcgacg gaaaccttgt tgaagcggac
     3061 aatctggcaa cagagcttgt tgaatacata caggatttat ttactgagac acaaaatacc
     3121 ttcgatacct tatcagcaca ggggattacg gtaaatgagc tggtgagctc ggatataagg
     3181 gacttgagcc aattttcaca gacaaatcag gagtttcgga aagagattga tatagcgttt
     3241 gaatatgagg acattcaaac ttatacgcct gaactcggtc aggacctgga tatggaaata
     3301 agcaataaat agcggaaagg gctgtgcccc tagacataca acaatgatag taaaacgtcc
     3361 gccaagataa ggacgcctta tgaaaaataa aggagaaaaa aatgagtgtt tatgacaact
     3421 taatcagcat tttgttcaaa ctgccggacg gcagatcttt gaacgaatac tacaaaaacg
     3481 ttttgctggt cggcaagatt acagaggacg acttacaaac tgacgtggaa ttcccgtcag
     3541 ggggggtggg aaagtattct tcttatgacg aagttattgc tgtattcaaa ccgacttcac
     3601 agtttgctat cgaagcaaat gccgttttta accaaaaaag caattcacaa accacatcgc
     3661 agattcaata tctgatgatt gcaaaacagg atgactcagg agcccttgct gatgcgctca
     3721 acagagcaaa agcatcagac ggcagatttg caaaggttgt tcctgtttct cgtgtggcag
     3781 ctgatttaaa agcggttgct gactggtgct tgacgaataa aagattctgc gacctgcctg
     3841 ttaccgatgt tgacgacgtg gctgaaattg tcgcgggcgg aaacgattac gcttacggcg
     3901 tgttttcaaa atccgcaaca aacccgattg cttcggctgt tgcttctaca tctacctgcg
     3961 gatattttgg aggcaaagac ggttctgcac agtttacaca gctgacaggg atattgcctg
     4021 aggtttatac gggtgaagaa atctctgaaa tgaacacaaa caatgttgct tattacacaa
     4081 acgtttcacc catagacggc gggcaaacag aggggttcgg gtataactgg atcataggtt
     4141 cgagaatgct cggcggtgag ttgagacaga gacagatgat caaggattat atcgaaaaag
     4201 atatggggct tatggctctg gaattcttta atcaaaagcc cgtttatgac gagaccggaa
     4261 acaacttgct tttgacaatg gcgcaaaagc gttttagaag ctatcagact tacaatcttg
     4321 taattgagac aaacaacgag cagacagggt ttgaactaaa ggttattcct atcagaacag
     4381 gcgctgacag cattatgaac accgatgttg aagcttataa cgctaaaaag tttaaacttc
     4441 aaggttatta ctatgatgct attgtcgggg agaaggtgga tttcttgttc tacgtagacc
     4501 cgtcagacga acaagttgaa cagattttag gggaggatga ataatggcag tttatgacgc
     4561 taagaatatc cagtttgtct ggagaggttt aacgctcaca ggaacaggtg acgaccacgc
     4621 ttataacatt acacagcaaa acgacagctt tacaccgtac aaaggtgtgc aggccgaggg
     4681 attgaacatt gtaaacaacc aaagacaatg gcagatcaca agaacattta aagcggacag
     4741 tgtatcttta ccgattttga tacaggataa tctcaataat gtagaagata cattagttgt
     4801 tcgtgacttg aatacaggca taacagacac ctttactgac tgtgttatcc tgaatatttc
     4861 aggcgagcaa gattcaggaa cccgcacagt aacctggaat gctttgtaca gaaacggtaa
     4921 gtaatttttt gatataataa actcagggta agaccacact cccgccaaca cactcgatta
     4981 cggagaaatc ggctggaaag ggggtgagaa tatgaaaagg caaataataa aaagtgccat
     5041 caaggtactg atagcacttt taacttttat ttgttgcttt ttatagggtc gaagtcaagc
     5101 tccgaagaag tagtgattct ttggggcttg cccctatatg tttattataa cctattttaa
     5161 acaaaaaaca agtgaggtta taatgataga atgcacggta aacggacata aatacacaac
     5221 tgctccgtta tattttgagg attttacaac actgggcttt atgacagagg aaaaggttta
     5281 tccttttttg acctgtctga cagcgtgcat agcaaacaat ctttccgatg cggaactttt
     5341 aaaggctctt tacaccagct gcaaggatat ttttaacaga gaagatttga agtttatatc
     5401 caatcttgtg ttgaatcgtg aacacatgac aatagacggc aagaaacctg atcaggcagc
     5461 gtgggaaaaa cactggcagg aggttggatt tatggattac agagttgttg tattccattt
     5521 tatgaggcaa aacctcggaa atttttcgag tttgtccgct ctgttaccgg acggatggac
     5581 ggacaaaatg aaacagcaaa tagaaaagaa attatcaact ctgtttacaa acttaagcga
     5641 acaaatacaa aaataaaagc tgattccgta aaaaacacaa tgaatctttt tatggcaaac
     5701 aaacagctcg gttttggtgt aaacctcgaa gagttaaagc gtatgacacc gcaggaagcg
     5761 tatttgttcg gacaacaggt tgcagaagca ctgcgccaat tggaaattga aagattagca
     5821 agataatggc aattgatgaa ttactggtaa aactcgtatc aaaactggat gacaaaggct
     5881 ttaaagagct tgataagttg gaaaagaaag ctgataagca aacaagaatt ttgtctgctt
     5941 ctttacgcaa catgtttgtc ggggttattg gaaacatcgg agttaaagaa attgttgatg
     6001 cgagtgtaaa gctggacagc ttaaagacct cgtttgcggc tcttgccggt tcagacgcag
     6061 gaggatccga acagttaaaa tacttaagag aagaaactca aaggctcggt caggattttg
     6121 ttactgctgc tgaggcatat aagaatctgt tttctgcagg cagaggtgca ggcatgaacc
     6181 ctgatgagat acaacaaata ttttcttctg ttctggaagc aggcactgtt ctggggtcat
     6241 cccagcagca aatgcaaggt gcattgatgg cactagaaca aatgatctcc aagggtaaag
     6301 tgtcaatgga agaattacgc cgtcagcttg gtaacgcctt gcccggtgca atgcagattg
     6361 cggctcgtgc tatgcacaca acctcagaag gtttacagga gatgctggaa gccggattgg
     6421 attcccaaaa atttgtaaca gcatttgcaa atcaactgca ttatgaattt ggagacaagg
     6481 cagttaatgc ttcacacact ttaagagctg agttggcaag acttgaaaat gctgtttttg
     6541 atttaaagac ctcctttcta gacggagatg ccggtacaga ccttggcaaa gttattgtgc
     6601 aagtaacaaa aatattgcag agtccggggt taaaacaatc attaaatgtt gttggtaaat
     6661 taacagtatt tctgttaaaa aacatcaggc ttattgcagg aacaatagta ataataggca
     6721 ttagacgttt gatatcaaca ttggctttgc taaggttgga attgcttact accacttttg
     6781 cagcgggttc gctcggtgct gctatgcagc tgtttgtcgg tggtaatata atagctggta
     6841 taagagcaat aacagctgcc atgtgggcaa ctttaagacc aattgctctt tgggttgcag
     6901 gacttttact tgtaatagag ctaatcgata cattaagagg taaaaaaaca gcacttggtg
     6961 aaattgtgga atctactccc acagtaaaag aagcaatagg cagtgaaaaa tttcaaagaa
     7021 aatgggttga tataaaaaag atttttggat tccaaaaaga agtgcctgta ttgcaagaca
     7081 gcgggatgta taataaagac ggtagcctaa agtcaagaaa taatatttct atgcaattaa
     7141 atcaaggtgc aattcaaata aacacacaaa gcacagaccc gcaagcaact agagaggctg
     7201 taaaaacagc aatgttcgat gtatttgaag ctatacgaat ccgcaacggt taccctcaga
     7261 cagaagtagt ttagctaaga tttgtatagc aaattcaatt agatagctta aaacagggat
     7321 ttattttatt ttaattttat gctataatag aaaagcatcg atgttgtaag tattgtaaaa
     7381 tgaatgataa atatcacata gcttttaata caaattatgt ttcttccctt actggagcct
     7441 ctatttctca attaaattct tgggacaggg ataatattgt ttcacctagt atcttgaaat
     7501 ctgaggggcg aggttctatt cgtatgtatt cattcaaaga tatagttgaa ataaggactg
     7561 ttaaatattt acgagataat caggtacctc ttaaagaaat aaaaagggct atagattatt
     7621 tgagaaattc tttaaatttt gataaaccat tatcagaact tgttttgata gcaagcaatc
     7681 ataatatact ttgtactcca cagggaaata ttaatgatat tacttcacaa tggttggctg
     7741 caaataaata cggacaactt gttatgtctt ttatggttcc attgggtgca attactaaag
     7801 atttagatga agcaattaca aaatatacga aaagaataga cgaggcggaa gaagaagaaa
     7861 agaatggcac attaattcct ttgtctaata ttgaggaaaa attatttggg gtatctggtt
     7921 ctaataacaa aaagcgtgga aagagaagac ctgcctaaat tacaaaaatc aggagttaat
     7981 cttaaaccat tgcagaatat tttcaaaaag ttacaatcta atccctatat aacatctaaa
     8041 tcaaaaacag gggacttgca aagtcatcgt gcagtgaatt ggaataatgg atatagagtg
     8101 ctttttaaaa tagatgaaga gaaaaaacaa gttataatag ttgccataga ttcccatgat
     8161 aatgcatata aaaaagcaaa aaagagaaat aattaaacaa acactatgac atacgcagca
     8221 atatatatta aaaaagacaa taaggttgta aatcctgttg atgctgttca atcagcaggc
     8281 ataaaagcag aactctcgca ggcttttagc aatgccaaaa cttctttgca aaactttgat
     8341 ttaagtaaaa tggcacagaa tataaatctg caaagcgcaa ccgagtttac acaaaagtat
     8401 gcggtcggtg ctttgactat gattatcaac caaagacccg taaccaatca aatgatgtta
     8461 gacagcctgt ttaacgggct tgcgcctgca ttgaatctta ctgctgctca ggcaggattc
     8521 aacagcatta tggaaatgaa atccgctatt gagtccggga atataaatgt tgctaacttt
     8581 atgcaaggtt tggaaaacgg acttgatgtt gtaacaggga caattacagg ctctcaagat
     8641 tacagcaaat acggagaaga aatccccatt gaccttacaa gcaacataac cagaacatat
     8701 attgcagaaa cacccgatag acgtgttcaa agcggacaaa catacaatga atacgtgcac
     8761 aatctgcctt tggtattacc tttttcagga atagtaaaag acggtttgaa ttatacagca
     8821 gatgagtttg ctgacaggct tgaagaaatt atgtattcaa aagagccgtt tacttttcgt
     8881 gcgggtgaaa agatatttga aaactatgtt tttacatctt ttacaccgaa aagagaaact
     8941 gaaaacggag tacagtttga tgcggaaatc aaatttatgg aagagggcga ggttgaatat
     9001 gtaaaagtga acatagccca acaatcaact gcaaagggga caggtgcggg cctaagaaaa
     9061 caagtaacaa acacaaaaaa aggacaaagc gttaaaaaca acacatcacc tcaaaaatat
     9121 gcaggtgctg tcggatttgt aaacagtatt ttaggcggag acggtgttac agttttaccg
     9181 ttgcttaaca gtatcacaaa caatttaaat tcttacaaat agtcagtttc aggcggggta
     9241 gcttccggca acatattttt aagcttttga tagcagctgc caaaatcgaa ctcataacct
     9301 tcaatatgtt tgaaaaataa ctcatatgat tcagttgtta tttttaaaca gtagtcttta
     9361 tgctctttgg ttcctatccc tgacatacca ccgacaacag cacctacaac accaaaaaca
     9421 agcccgccga ctaacgcacg accaacaaca gatttgtctt cttctgtaat ttgctttaaa
     9481 atttcaacat ttttcattct tatctggtag gttttactct cgatatcaag ccaaacatca
     9541 gagtcttcaa ctctgatttc acaaggtttg ttcnnccaag ccctcaacac cttgaacaaa
     9601 caaaagctta taaccctttt tttgctcaaa cggatgaaaa attgcattta atagcatcaa
     9661 tacaaatatt atacaaactg caataatcca ggacataaaa cacacgcttt ctagtcatct
     9721 tcttctatat tttgattttc atttatatca aaacttccat cttccggatt ataccaataa
     9781 ctttctgtaa catattcaac ctgttgatct tcttcatttc ttacatgact atgttttttg
     9841 tcaattttta cggtattatt tcccgaagca attctgtttt tttctattag tttccttttt
     9901 atattcagat ttgataatat ttctaatgtt gcagaatcaa ttttgttttc ccaatcaggt
     9961 tcttttgcaa tcattttcag ccccttgagt aattgcttat tatttttacc aacgacattt
    10021 ttaccttttt ttaaatcatc aatcaactca cgtgcattaa tcaatttttt atcttcaata
    10081 gaattttgtg tgcctttttt ctcgtcattt tcgcgcttaa gaaattgttg aatatttttt
    10141 gtaattctat taaaaaaata acctgataaa aagcccaaaa ttatgcataa tatacctatt
    10201 attaagacaa gcgcatatct tatatcaatc atttttccaa cttccgatct tgcgaccgta
    10261 gcggtcgtat tcagttattg aaccgtcgtt gttctttttg aaacttcctg tttttcttcc
    10321 gtatttgtct ttttttacaa catagccgtt tgactgtttt tcataagaac cgactttacg
    10381 gccgtatttg tcccgcttta ccgctgcaca acagggtagg gcaaaacaca taatacagaa
    10441 tattacaata agttttttca tctcaacacc tttatgtatt ataacatatc aattcaatta
    10501 taaattactt ttaagaaaca gaaattaata tattttccgc tatgaacaca tttacattac
    10561 cagatataaa tacaaaccct gatataaggg tgtcatatac tattaacaat cagtcgtata
    10621 tgtttcattt ccaatggtgc gattcttttt gcctgcttga tatttatatg atacaggata
    10681 atgaaaatgt ttacatcgca aaaggcgagc ctcttgtacc gggacgtaat ctgatagccc
    10741 gcgcggatat gcagggcagt ttgatgctgg tgaataaata cggacaaaac gcagaactgt
    10801 tgcaagaaaa cttttctact gattttgttt tggtttatat agcggatttt gcgtaggctg
    10861 actgaacgaa gtgaaggaac gccgaagtaa tgaggacaaa aacgaacgac aacgaagtga
    10921 agtgagtact tgtccgaatg gagcaataat ccaagacgcg gagaacgagt tagatggcgt
    10981 ataataagtt aaaattcaat ataatgctgc aagttgcagg tgccgatctt agtatacaag
    11041 atctggatat agattttgat gtatacaaaa acaataaatc agaaaacaat aaatcgacaa
    11101 tcacaatctg gaacctgaac gacacaacat atcaaagatt gttggaaaaa acctatgcag
    11161 tagatttgta cacctggtac ggcgatgacg aaccatcttt aatgttcaga ggctttgttg
    11221 acaaagataa aacctcaaaa cgcaacataa acggcaggat aaatacagca aaaggctttt
    11281 tggaaagccc tgtaagacag gacataaaag gttcttttga tattcctaca ataattgaac
    11341 ttgtggacgg gcacgttgcc tacacacaaa caaaaataaa caaagattac cgaaccaaag
    11401 taacctcaac tcaaattcta aaagactgta ttgaggcaat gggtgttgga actgcaaaat
    11461 tcagcgacaa gctccctgta aaagaatatc cgacttttaa agccgttggt gcacctcaag
    11521 ctgttatgca acaggtttgt aaacctctcg gtataaaatt taatatatca aacgggttga
    11581 ttcaggtggt tgcccctgat gaggaattta acggggagtt tgctatactt ttaaaccgtg
    11641 aaaactcaat gcggcccgac agggtaggag aaaatgaact tgttatatca acaaggctta
    11701 ttccgtcttt gaatccttat gactgggtac aatgtgattt taatgagttt tcgggtgttg
    11761 aaagtgtgcg tcaggtgcat tccaaaggaa ataactacgg tacacagggc tctacggaaa
    11821 ttattatagg ctttgataaa ttaaagaaaa aaactaaacg caagaaaaag aaaacagaaa
    11881 acttatgaga gattgtaatg attcttttaa tgacatatta gacggctttt ccaatgcaac
    11941 tcttgttgaa aagccttgta agattgtgaa agtaaattcg cagtattgcg ttgatgttga
    12001 atattatgac aacaacgagc cttactacct ttataatgtg cctgtaaaac atttgcagac
    12061 acaaagtgct tttgttttct tggggctaaa ggcaggcgac tgcgggacag taagattttt
    12121 tgataacgat gtaacgggtt actatgctga tgacgagtat gtaagcgatg aaacaagaag
    12181 ccatgacata aatgacaatt tgttttcttt cgggttttat ccggcacttt cacagtatgt
    12241 atttcctcat ggtgatgtgg taataggcac gacctcggga gctgttgtca acctgacagc
    12301 tgcaggaata tctatcagcg gcggtgatgt ttctataacc gggagcggga atattacaat
    12361 ctcaagcagc agcgtctcaa tcggagcaga cacaacaatt gacggtaaaa agtttttgga
    12421 acacacacac tcaaacggaa accagggcaa cccgacaggc ggggtgattt aaatgacgga
    12481 tatattgatg aagaataatc gtttgccaat gtacaacggt gactttgtgc tgacaaatgc
    12541 aactgacgag attaaacagc atattgctac ggcgctaaat acgttttata cagactggct
    12601 gcttgatttt acaaaaggca tagattacgc ctatggccta agacatgagg aatttttgcg
    12661 ccacgatatc aaaaatcaga ttctcggagt cgaaggggtt gtcgcgttgt ctgcgtttag
    12721 tatgaagttt gacaaaacaa accggagctg gcaagtaaca gcagcggtaa aaacgattta
    12781 cggaaaagtt gaaattaatg aatacattca gcaatgattt ttgggaaggc ctgtggccct
    12841 gaacaaacac caggatagaa gatagtcaac caagataagg aagccttgta aaaaaaatga
    12901 aaatagatga aaaaggaata gttctttcaa ccttaaacga tattttagac gcttatgaat
    12961 tgcgatatca aagcaaatac ggcgctgatt tttatataaa acccgagggc gtaattgaca
    13021 atattgccca gtcatcaggc tttatggaga tgtccttgca ggaacagatt gcctttttag
    13081 gcaaacaatt cgaccctgaa acagcagaag gagtctggca ggacaagctg tatgaaagaa
    13141 taaatcttta cagactggag gcccaatcca cagtatttac caaaggcata atcggaacac
    13201 cgggttttag tgcggaagca ggctctgtta ctatccgttt agaggcgacg ggtgatgaat
    13261 ttgtcaacag tgaggccttt accatagaag actcgggtac ggcaaatatc cggtttgagt
    13321 gcgtaatcac aggtgtgatt ccggtgaatg ctgctgatac ttttcaaata gttgaagcac
    13381 caaacgaaat cacagcaata tctcaagaag atgcaacaga catagccaca ggcagagaaa
    13441 gagagtctga tgacgaattc aggatacgtt atcgaacagc aaaagcaata aacgcaaagg
    13501 caacaagaaa tgccaatatt gcaaaccttt ccaaatatgt tgataacata gcatttttaa
    13561 agattttcga caaaaaaaca gattacacaa tggaagccgg tacgctgctt gttatagcaa
    13621 agcacaatac aacggatgca gcttttgcaa atgcagtttt tgaaagcgta acagacggaa
    13681 ttgacttgtt aggcgatgac acacaggtgg tcaaagacag agcggggcag gacgtaacga
    13741 taaactggaa aaacgctgac gaaatccaaa ttgatataac aggaacaatc aaagtgcgtg
    13801 acggatatta ccccaacaca gtaatagcaa atgcaaaaca aagcatatta gcttatatag
    13861 aaaaacgtgt gttcgggctg gaatcgataa tttatgcaac ggaatttatt attcctgtgc
    13921 tccaaaccga cggagtagag gcagttatcg gcattcagat aaaaaaacac gatgacgaag
    13981 agtttacaga cagcgtaagc ttgagccgtg aagaggttcc ggagttcgct ttggagcgta
    14041 taagtttaac agagcaatag cgatgataag tgaaaacggc tgtgccgctg aggcgcggac
    14101 aatgattata aaacgtccgc caaggaaagg acgccttata aaaaaatgaa aacatttaac
    14161 taccagattg aagcattgaa atacgtgctt ccatatttgc gcgcaaacga ggatgtcgct
    14221 gttgtgctaa aagctatcgg ggacagattc aacaacttgc agacggcaat agtttacttg
    14281 cttgacactc ttgatatcag aaaagcaaga ggcacctggc tggattatgc cggagcagag
    14341 gtcggcgctc agcgtgatga aatggatttt ggcgattatt tttgtgtcaa cagattgcat
    14401 ataaacgtcg caaaaaggtt ttatttcctg acatcagggc tggatcccga aacacccttg
    14461 agcttgaacg acgcagagtt tatacaaaag atttttgcgt atataggtgc aaactcctcg
    14521 tgcgggactc gaaacgaaat catcgatatt gtaaaaacta tcacaaacgc acaaaaggta
    14581 attgttcaaa aaacaggcag atgcgttttg aaaatagatt taacgggcga ttcattaatc
    14641 attacacaaa atacggttaa ttatattcaa caaattatag gcgacggaat ttatttagag
    14701 gagataacat taaatggcaa aaccaactga acctaatatt tcaatacctc aaggctttgc
    14761 gaacgaaggt caaaaaactg actttcttga agaaaaaata caaaaaggct ttgaccctgt
    14821 agaccctgat gtgctggcag gggacaacct taacaaattt attgacgata catataaagg
    14881 cttgaattat acaattgact cagttaatga cctttataaa ggcgctgttt tgtatgatgt
    14941 gagagaaaat tactcaagca catctattgt atttaatatc gaagacgatg gtatatttat
    15001 atataaatct ctcaccgatg acaaccttgg caacccactg tctgatgaga caaagtggaa
    15061 aaaagtagac ctgggtgacg gcggaggcgg cgacacagga ggcggcttct ccctcttcga
    15121 cgtggtagaa aaagaccaca tcttgagctt tgaggagtca atgggcttcg ggcttttagg
    15181 cacatacgtg tacaaggaac ctgttgccgg ttctcgctac ggctaccctg atttttacaa
    15241 cgagtgcgtg gcgcaaaaaa gcacagaagg caacactctt ttggctttga aaaacaatgt
    15301 tgaaatagtg ggctctcctg tagtaaacaa cggagtgttg agcgggttta gcacgagcag
    15361 ctatgcaacc actttgactt tccccactga cgaggatttt gattttcaat tcaaactcaa
    15421 aacaggcgct gacatatcag gcgagcaaga aatttttgca tgtcctacag cgagcgggcc
    15481 atctcaatat tatttttgtt tagtaaactt agaaagtaat aatcttaatg taatttttaa
    15541 tggtggcctt ggtgtttggc agtatccttt tggaacaccc gctcaaccgg aaacagatta
    15601 tattgtcaaa gtagtttatt ccaaaaccaa taatacattg catgtgacta tgtctttggc
    15661 aaatggcacg gtattgcttg atgatacaaa acaggttgac gaactgtacg atataaaaga
    15721 ggcagttata ggtacaggca aagataatgc agtcactatc ttcaacccat ttaaaggctc
    15781 tgtggatttg aaagaatgtt atatagaaag caacggccag cgtatctgga gcggtgcctc
    15841 gatagccaca aagaacccta acggacacat cttctacgac attgcagaca aagccactgt
    15901 tgatgaaatc ttttctcaac gcggtgaggc gtggttttac ggcgtagata cagaaaatga
    15961 aagaatcttt ttacccagag gcacacgttc acagtacact gtaaacactg acgaaacagg
    16021 cgattatgta gaagcagggc tgccgaatat caccggcaca atggtcggtg atatttcaga
    16081 aggcgtagca acaggggctc tgaagataga tactatatat tcaggtgcta tgtggcaagg
    16141 aagcgtaaac gtagcacgta tgagaaattg gagccttgac gcttcacttt ccaaccctat
    16201 ctatggcaaa tccgacacag tacagcctta tgcaacaaag aaacttttgt acattgtagt
    16261 cggcaatgta aaagtgcaaa gtgcggcttc tgatgttgtg gatgttacta caactgaaaa
    16321 tgacactgtg ccgttgttta caggacagta tttcaatttc aagccgaaca acccaagctg
    16381 gctaaaagca ggagaacaac aagacagcgg aggtatatac acttcttgct ataacaaact
    16441 tgtacaagcc ttaaccgata atatctggga aataaaagta atagactcca ctgctatgga
    16501 agagggtaca gactactccg agtattggat tgtttatcaa gacgcaatga ggtttaggac
    16561 tccgttaaca gcctgtaagg aaataatgcc cggaaacgaa ataacgagca gcttaggttt
    16621 ttcttccaat cccacaaata cagtcgaatc atatacagtc ccttacaatg gatatattac
    16681 gataataggg tataagacct ctacatctaa tactttaacc gtgaaactca atggcacaat
    16741 cgtcagccaa acaagagccc tggcctcagg tttgagtagt gaaagttact tctttgcaag
    16801 aaaaggagat attgtaacgg taagtactga ttctacaagc acaggatggg ttattgcaac
    16861 gcaaacaata accaaagcta cggcaaacgg tgaactctac ttcaaagcag ccagcgctgt
    16921 agaaaacata gagattctaa atgttggcca ggtaatggag gaattatcaa acaaggttaa
    16981 tgtgtccaat accagctggg cgattaatgc ttgtatgcct gattatacag cgcaaacaac
    17041 ttttactctc cctgatatcg gacaaacttt tacggcccct tatgactgtt tgttatttgt
    17101 atctattttt aatgccggcg ccggcaactt tgaactcaga tacaacaatt caaacggagg
    17161 tttaataatg tttggtgcag caggaagcaa tcaagtacat gtctcacaaa cagcctatct
    17221 aaaaaaaggc tggcagattt atagaggagg acaaattggt tacaaccaat gttacatcac
    17281 ccctcttatt ggtgcagaag gagcaaacta atgattaaat acgcaaaagt aataaacgaa
    17341 caaacaggcc tgtgcgaagt aggaataggc acaaacagta aattctacaa atcaatcggc
    17401 atgaaagagc aggacgtctc tcaatctgac atagacggca agtggtattt gtcagacaaa
    17461 tgcccgatga aatccaatga aaccaagctt gcagaagcca agcaagcaaa gctcaacgag
    17521 gcaagcaaca aagcctttga atatagagat aaaaccggca ctgtttcatt cgacggcaga
    17581 cctgtggagc ctattatgcc tatgacagag ggtgaagagc ccccagctac aataaccgtt
    17641 cacacagagc ttttaaatca agatgatatg tttcagcgtg tcataggctt ccaacagggc
    17701 atttttacgc aagaccaaat atacaacaca aaagaggata tccccgtcta cctgaatgcg
    17761 caagaagcac aggccgttta cttcgctata gttgcacgtg ctcaaaaact gtgggtacaa
    17821 gactatatga catacaaatc aatgattgaa gcgtgcacca ctgctgaaga agtcaatgca
    17881 attgtgattg attatgacaa tgtacctgta attcaagagc cagaagcacc tgaagaacca
    17941 acagaagaaa caaccgagga atcctcggat gttgaggagg aacatgagaa taaacccgac
    18001 aaaaccacac ccgataccgg tgttcaagag gttcaggaag acactgcagg agagactgaa
    18061 taatggaaaa atttatcgaa tatgcgccgt caatcatagt tgtgatagct tttgcagcag
    18121 cttacaaagt ctttgcaaca ccaaaacagc ttgcagaact taaatcacag ctgattgaat
    18181 acatttcaga acactatgta tctgaaaaat cttgtgatag ctgcacaaaa cacattgacg
    18241 gaacattaaa aacggttacg gaatcaattc agaagctcga tgagaaactc gatatgaaaa
    18301 ttgataaagt caccgaacta atagaaagac gtattgaaca ggcggagaga ggtcattgat
    18361 gaacaaaata atcatccact ggacagccgg aacctatcaa ccaaacacaa cagaccttga
    18421 acactaccac tttttaattg acggtgaagg taaaaaacac aatggaaaat acaaacccga
    18481 aaataacgaa aattgcaacg atggcaaata tgctgcacac acaggaggcg gcaatacagg
    18541 cgcaatcggc gtcagtatgt gcgctatggc tggcttcaac tctgctgctt cttgtggcaa
    18601 ctatcctata acacccgttc aacttgaggc gtgtttcaag ctctgtgccg agctttgcaa
    18661 aaaatacaac atacccgttg aaaacgtttg gacacactac gagtttggaa taaaccaccc
    18721 cgacactacc tctcacggca agatagacat tatctatcta cccccgtacc ctctcgtaaa
    18781 acgcaacgaa gtcggcgggt ttataagaag caaaatcaga tggtatttga acaagttata
    18841 aaaagaaagg cggaaaaaat gaaatggtac gaatttttct taaactactt aacacaggca
    18901 agcacctaca aaggtatttt cacaatgctt gcagcatttg gtgttgttgt ttcggacgga
    18961 cttacacagg caattattgc cgtgtgcgtt gcggtatttg gactagtgga cgttatcatt
    19021 gacgaaagag caaaaaaata atgtggcttg gtatttctac nnnnnnnnnn tctcaagcgg
    19081 ttttgactac gcctcaacat ccaaagaaca ccagtccgaa acgcagatta tcaaagataa
    19141 aaagaggcta aagaaagcca cagatattgc agaaaaaatc atcagtcttg tttataaata
    19201 tcttgattgc ttcgatgaaa aggacagaaa aaagtttata aaactgcacg atgattttaa
    19261 agataacaac taaaaaaggc cctctactgt tgagtagagg gcctttttta tatcttttca
    19321 aaattatata aaattcttgg acattttttg gacaatttat aaaaaa
//
LOCUS       DABS01000117            8937 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_18430, whole genome shotgun sequence.
ACCESSION   DABS01000117 DABS01000000
VERSION     DABS01000117.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8937)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8937)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8937
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..1544)
                     /locus_tag="CPT85_04650"
     CDS             complement(<1..1544)
                     /locus_tag="CPT85_04650"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23713.1"
                     /translation="MGALINTDKSIIEAAKLVACKIDDTELRKRTYALNIAANAAARY
                     LNENNVIADTKQSLYKVPSFARNIELADIYVNGVRYDVRVTFDGKSFCIPKIQEKYDA
                     VPAAYIVVQLENSLKEVEILGFIPSEKLTDNKANAEYYCYSTDILLPIEEFGNFAQNQ
                     SVKIHPFSSLDHDKIKEMCAGFIDNEITEPEKIYFIKHVIACPVCRETFCDMNDFDTI
                     LSQLKNYHELLNDSTLSVFSGNKEEFDAALIAGMGVVENAMENTVVEPEVLQEEDILE
                     EQEPQKKEELVLEAIQEEAQAEEYEQQEQEADTVTEENEEAEEVATLAQEPDEVIEEP
                     EEIESIDESESIDESESIDPIESVEELESIGELDNLAELEELEETEPETLEEPLELLS
                     EDNELLELGDEPTEVQPSVDETAVAEPEIEEPIMDEPAIEEPLEEQTDSYQEPVELKY
                     DDEETEEIEQDIEQEEENPQELPAMFDFAKATADIETEPDENQSKQDEEIQGLLDDDL
                     LALLSDS"
     gene            1743..2246
                     /locus_tag="CPT85_04655"
     CDS             1743..2246
                     /locus_tag="CPT85_04655"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23714.1"
                     /translation="MSDFSVITPLNTATISRSPSYSKGPQVQAAPDALASTPVDAYGY
                     PQQKKKSHWFLKTLAAVAVLGTTAAILRKKVDVFKNFDLAGAKLADKASLTEKAKFYG
                     TKVVSYVGEKVNQGVDYVVRLFKGLGKGSEKTAEKTTEKAAEKATEAATAATAQAAET
                     TAQAAAK"
     gene            complement(2309..3196)
                     /locus_tag="CPT85_04660"
     CDS             complement(2309..3196)
                     /locus_tag="CPT85_04660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016838560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="DAB23715.1"
                     /translation="MKDFKSGFVAVIGRPNVGKSTLLNTIIGQKIVIATDKAQTTRRR
                     IKGIFTNEEGQIVFIDTPGIHKPLDKLGEYLMDEAKYSIPDADLILFIVDVSEPAGAG
                     DKWIVENLLKETKTPVIIVLNKVDKLKDPIKKEQNLLTYKMLFDTNLPTAKISAQTGR
                     NIDTLISTIMRKLPEGAPIYAEDDLTDESMRSIAQEIIREKILLNTKDEIPHSVAVLI
                     EKYEEKEDIDKIYAKIHVEHESQKGIMIGKKGQMLKTIGMQARKELEKMLNKKVYLEL
                     NVKVSKDWRKKTPDLENWV"
     gene            complement(3212..4024)
                     /locus_tag="CPT85_04665"
     CDS             complement(3212..4024)
                     /locus_tag="CPT85_04665"
                     /inference="COORDINATES: protein motif:HMM:PRK04201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="DAB23716.1"
                     /translation="MGRFKLIVEHHHIIAFVLTLIAGLATIIGGSFSFFVKRSNLRML
                     AIGLGFSAGVMVYMALTEILKDSREFTQMYFGNNAALVTFIGFFAGIGIAALIDYFLP
                     AHFGDDMIDKAPQDISEDDERIKKAGLLTAIAISLHRFPEGLTMFLVASTDLKLGIPL
                     VIAMAIHNLPEGIAIGLPMYHATGKKRYAMLFSAIAGISGPIGAILGFILIKLFMPQM
                     AIGILFAMVAGIMVYISLDTLMPTAREYGENHDVMAGIFAGMFFIGAGLLFV"
     gene            complement(4042..5124)
                     /gene="prfA"
                     /locus_tag="CPT85_04670"
     CDS             complement(4042..5124)
                     /gene="prfA"
                     /locus_tag="CPT85_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012306662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="DAB23717.1"
                     /translation="MKDMLDKILQIEEKYTELGTILSDPEVIADYEKFRDLSKQRKAM
                     EETVDVYHQWKSNMDAIEDAKELLKSEADPEMKQFLHAEIESNEAKNIELEERMKVLL
                     LPRDPMDDKDIMLEIRGGAGGDEANIFAGDLMRMYLRFADKQGWQSQILSKTDCEAGG
                     VSEVIISIKGDSIYSKLKYESGVHRVQRVPQTESQGRVHTSTATVAVMPEVDDVEVEL
                     NPNDMEISTARSGGAGGQNVNKVETAVRIFHKPTGIMIFCTEERSQLQNKERALQILK
                     AKLYDMEVQKQMQEITDLRRSQVGTGDRSERIRTYNFPQGRLTDHRIGQNLNVWTVIE
                     GELDELIKLLMEHDQKLKLEKLAEIN"
     gene            complement(5156..5704)
                     /gene="rsmD"
                     /locus_tag="CPT85_04675"
     CDS             complement(5156..5704)
                     /gene="rsmD"
                     /locus_tag="CPT85_04675"
                     /inference="COORDINATES: protein motif:HMM:PF03602.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="DAB23718.1"
                     /translation="MHITGGYLKSRKIESPKGANVRPTLSQVRESIFSVLYSITDFEK
                     KSFLDAFAGSGIIGFEALSRGFEQVCFIEKDKKTFFLLKDNAKKLGIEPQFFMGDTLK
                     VLKKTDSDFDVIYVDPPYQSGLYDSVLEIVRQCDVLKKDGIIILEHPSRLEINIDGFE
                     LIKKKIYSDKCITFLRLSNQHV"
     gene            5783..6574
                     /locus_tag="CPT85_04680"
     CDS             5783..6574
                     /locus_tag="CPT85_04680"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23719.1"
                     /translation="MNRNIIKSFVYPLKISKGTFQARMIRSNEQAVQYFNATVRNFSD
                     GDVHLKTLEKNMNDIVNYPLINVRFFGHRHVNSSSFVHFDSDSPILRVAIPAAETLNR
                     LEKTVFGKIINKNVEEPNHEALHIFDLINNPKIVARALXSKKFKQIDEFFTNHLYGNF
                     NDTKHMSRNIVKIENSLRKFLKNTKLQEQINILQYYRNNCLMESRAYNWGAKCQQKFN
                     TEQNCKESLVHLFQFSIFFKRKYEMLNKLLFETIEKERIKMHKRR"
     assembly_gap    6203..6204
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(6575..7219)
                     /locus_tag="CPT85_04685"
     CDS             complement(6575..7219)
                     /locus_tag="CPT85_04685"
                     /inference="COORDINATES: protein motif:HMM:PF00596.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase"
                     /protein_id="DAB23720.1"
                     /translation="MSRNNILEIKKSIIKYGAKLGEKNMSPATSGNISVRVENNILIT
                     ASGTCLADLSEDEIVLMDKHANVIEGSRKPSSEKNLHIAIYEMRPDINAIVHCHSPYA
                     SAFAVCQIPLSKPIISENVFYFGEIPVAPYALPGSDKLVENTAKYFAKHDAVLLANHG
                     IIIGAKDLKNAYYLMETAETFAQIYLNSMLLGGAKELCKEDIEEIYELKKAMLK"
     gene            7289..8074
                     /locus_tag="CPT85_04690"
     CDS             7289..8074
                     /locus_tag="CPT85_04690"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23721.1"
                     /translation="MSEIINFEQVTQWLEEYQKIDSQKQKDQLQNLIAITCMPLVKKV
                     ARTLARRSTDPVEDIIQVGSLGLIKAIRLYNPEISRNFKSYATYLITGEIRHYLRDKA
                     SMIKAPRAIQELAYRVHKMTLELIEEMGEKPTDHQIADKMELPVDKVKEAIDADRRKT
                     TLSLDQLSFQDDDDNFSNWSDKIADVNYENLQSLREDRIMLTESLQNIEPELKKIVEL
                     TYFKDMSQVEIANTMGISQMQVSRKLKKALNLLYDIINEKQSA"
     gene            8092..>8937
                     /locus_tag="CPT85_04695"
     CDS             8092..>8937
                     /locus_tag="CPT85_04695"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01478.16,HMM:PF06750.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23722.1"
                     /translation="MDWFWTVYAFVIGLCIGSFLNVVVLRGFSGESIVLPPSHCPKCD
                     HKLAWYDNIPVFSYLLLGGKCRYCKEKISIQYPVVELFTGIIFAGIYYKYSLGLTEIF
                     NVNILFLWIAAALCIAMTVTDIKEKVIFVIHTYLLAGLGLVYNFFNIGAQNSAKITLW
                     LAGFKLTVYQSFIYSILGLVAGFFVLFTIAKIAKFITKKDCFGDGDAYILGALGAFFG
                     VSNAIVILILSIFIWGGFAIPVFLYKWFKNKEYKLLSGMLLFIITTALFLTGEYLNIF
                     TSDMFR"
BASE COUNT         2807 a         1723 c         1503 g         2902 t
ORIGIN      
        1 gaatcagaaa gcaatgcaag caaatcatca tcaagcagac cctgtatttc ttcatcctgt
       61 tttgattgat tttcatcagg ttctgtttct atatcagcag ttgcttttgc aaaatcaaac
      121 atagcaggta attcttgagg attttcttct tcttgttcaa tgtcttgctc aatttcttct
      181 gtttcttcat catcgtattt caactcaaca ggttcttgat aagaatctgt ttgttcctct
      241 aaaggttctt caattgccgg ctcatccatt atgggctctt caatttcagg ttcagccaca
      301 gcagtctcat ccacagaagg ctgaacctct gtaggctcat caccaagctc gagaagttca
      361 ttatcttcgc tcaacagctc aagcggttct tccagtgttt ccggctctgt ttcttccaac
      421 tcttcaagtt ctgcaagatt gtcgagctct ccaatgcttt caagttcttc aacgctttca
      481 attggatcaa tggattcact ttcgtcaatg gattcacttt catcaatgga ttcaatctct
      541 tcaggctctt caataacttc atctggctct tgtgctaaag ttgcaacttc ttctgcttct
      601 tcattttctt cagttacagt gtcagcttct tgttcctgtt gttcgtattc ttcagcttgc
      661 gcttcctctt gaattgcctc taaaaccagc tcttcttttt tctgcggttc ttgctcttca
      721 agaatgtctt cttcttgcaa tacctcgggc tcaacaacag tattttccat tgcattttca
      781 acaacaccca tacccgcaat aagtgctgca tcaaattcct ctttattgcc ggaaaaaaca
      841 ctcaaagtac tgtcattcaa taattcatga taatttttta actgtgacaa aatagtatca
      901 aagtcattca tatcacaaaa agtttctctg caaacaggac aagctataac gtgtttgata
      961 aaatatattt tttcaggttc tgtaatttcg ttgtcaataa aaccggcgca catttctttg
     1021 attttgtcgt ggtctaaaga agagaacgga tgaattttta cggattgatt ttgtgcgaaa
     1081 tttccaaact cttcaatagg taataaaata tcagtgctgt agcagtaata ttcggcattt
     1141 gctttattat cagtcagttt ttcagaaggt ataaaaccga gaatttcaac ttctttaaga
     1201 gaattttcta actgaacaac aatataagca gcaggcacag catcatattt ttcttgaatt
     1261 ttaggaatac aaaaactttt tccgtcaaac gttacacgta catcatatct gacaccgtta
     1321 acataaatat ctgcaagctc aatattacgg gcaaaagacg gcactttgta aaggctctgc
     1381 ttagtgtcag cgataacatt gttttcattc aaataacgcg cagcagcatt tgcagcaata
     1441 ttaagcgcat atgttctttt tcttaattct gtatcgtcaa tcttgcaggc aacaagcttt
     1501 gccgcttcaa taatactttt gtcagtgttg atcagtgcac ccattttata tccctctata
     1561 gttaaaatat ctcttatatt actttagatt acagttttaa aaaaaatatt ccaaaatata
     1621 atcaaaagtg atataatgta acaaaatgtt tcattaatta gcatcatggt tctctaactt
     1681 agcaataaaa atactttata tgttttgtat gcttataagg tcaataaaag gagtgtgtta
     1741 ttatgtcaga tttttcagtg attacaccgc ttaatacagc aactatttct agatcaccat
     1801 cttattctaa aggtcctcag gttcaagccg ctcctgacgc tttggcaagc acgccggtag
     1861 acgcatatgg ttatccccag caaaagaaaa aaagccactg gtttttaaaa actcttgcag
     1921 cggttgcagt acttggcaca acagcagcaa ttttaaggaa aaaagttgat gtattcaaaa
     1981 actttgattt agcaggtgca aaactagcag acaaagcatc attaaccgaa aaagccaaat
     2041 tctacggaac aaaagtagta tcctatgtcg gtgaaaaagt taatcaaggt gtggattatg
     2101 tagtcagact atttaagggt ttaggcaaag gctctgaaaa aaccgcagaa aaaacaacag
     2161 aaaaagcagc ggaaaaagct acagaagcag caacagctgc tacagcacaa gctgcagaga
     2221 caactgcaca ggcagctgca aaataaaccc aaaaatcaaa aattgattaa aaaaataccg
     2281 cctcaattta tgggcggtat ttttgtgact aaacccagtt ttccaaatca ggcgttttct
     2341 ttctccagtc tttggaaact tttacattca actcaagata cactttttta ttcagcattt
     2401 tttccagctc ttttcttgcc tgcattccga tagtttttag catttgtcct tttttaccaa
     2461 tcatgatgcc tttttgactt tcatgctcaa cgtgtatttt ggcataaatt ttatcaatgt
     2521 cttctttttc ttcgtatttt tcaatcaaaa cagcaacact gtgcgggatt tcatcttttg
     2581 tatttaaaag aatcttttct ctgataattt cctgtgcaat agagcgcatg ctttcatcag
     2641 tgaggtcatc ttctgcataa ataggtgcac cctcaggcag ctttctcatt atggtagaaa
     2701 ttaaagtatc aatattcctt ccagtctgtg ccgaaatctt agccgtaggc agattggtat
     2761 caaaaagcat tttgtaagtt aaaaggtttt gctctttttt aataggatct tttaacttgt
     2821 ctactttgtt taacacaata atcacaggtg tctttgtttc tttcaaaaga ttttcgacaa
     2881 tccatttgtc acctgctccg gcaggttctg acacatcaac aataaacaaa atcaaatccg
     2941 catccggaat agagtattta gcttcatcca tcaaatactc acccagcttg tccaatggct
     3001 tgtgaatacc tggagtgtca ataaaaacaa tctggccttc ttcgtttgta aaaatgcctt
     3061 ttattcttct gcgggtagtt tgtgctttgt ctgtggctat tactattttt tgaccgatta
     3121 ttgtgttcaa aagtgtggac ttgcccacat tgggacgccc tataacagca acaaaacctg
     3181 atttaaaatc tttcataaaa tatccttttt gctaaacaaa taaaagacct gcaccgataa
     3241 aaaacattcc tgcaaaaatg cctgccataa cgtcatggtt ttcaccgtac tcacgggcag
     3301 taggcataag tgtatccaga gaaatataaa ccataatgcc tgcaaccata gcaaacaaaa
     3361 tacctattgc catttgcggc ataaaaagtt tgataagaat aaaaccaaga attgcaccaa
     3421 tcgggccgga aatacctgca atagcagaaa ataacattgc ataacgtttt ttgcctgttg
     3481 catggtacat aggcagccct attgctattc cttcgggtaa attgtgtatt gccatagcaa
     3541 taacaagcgg aatcccgagc tttaaatctg tgctggcaac aagaaacatt gttaaacctt
     3601 caggaaacct gtgaagcgaa attgcaattg cggttaaaag tcctgccttt tttattcttt
     3661 catcgtcttc tgaaatatct tgcggagctt tgtcaatcat atcgtcacca aagtgagcag
     3721 gaagaaaata gtcaattaaa gcagcaatac ctatacctgc aaaaaatcct ataaaagtaa
     3781 caagagcagc attgtttcca aaatacatct gggtaaactc tcgggaatct tttaaaatct
     3841 ctgtcaaagc catgtaaacc ataaccccgg cagaaaatcc caacccgatg gcgagcattc
     3901 ttaaattgct tcttttaaca aagaaagaaa aagacccgcc gataattgtc gcaagacctg
     3961 ctatcagagt cagtacaaat gctattatat gatgatgttc tactatcaat ttaaaacgtc
     4021 ctattcaaat caaaaaaagg tctaatttat ttcagccagt ttttcgagct tgagcttctg
     4081 gtcatgttcc atcagcagct taatcaactc atcaagctca ccctcaataa cagtccatac
     4141 attaaggttt tgaccgattc tgtggtcagt caaacgtcct tgagggaagt tgtatgttct
     4201 gatacgttct gacctgtcgc ctgtaccaac ctgtgaacgt ctcaggtctg taatttcctg
     4261 catttgtttt tgtacttcca tatcgtacag ttttgctttc aaaatttgaa gtgcacgttc
     4321 tttgttttgc agctgtgagc gctcttctgt acagaaaatc atgatacctg taggtttgtg
     4381 gaaaattctt accgcagttt caactttgtt aacgttttgg ccgccggcac ctccggaacg
     4441 tgcagtagaa atttccatat cgttagggtt taattcaact tcaacatcat caacttcggg
     4501 cataacagca actgttgctg tcgaagtatg aacacgcccc tgtgattctg tttgcggtac
     4561 acgctgtaca cggtgaacac cggattcgta tttgagtttg gaataaatgc tgtccccttt
     4621 gatagagatg ataacttcag aaacccctcc ggcttcgcaa tctgttttgc tcaaaatttg
     4681 tgactgccag ccctgtttgt cagcaaagcg aagatacatt ctcatcaaat caccggcaaa
     4741 aatgtttgct tcatcacctc cggcaccgcc tcttatttcg agcataatat ctttgtcgtc
     4801 catcgggtca cgcggaagca agagaacttt catgcgttct tcaagctcaa tattttttgc
     4861 ttcattagat tctatttcag catgcaaaaa ttgtttcatt tcagggtcag cttctgactt
     4921 taacagctct tttgcatctt caattgcatc catgttggat ttccactgat gataaacatc
     4981 aacggtttct tccattgcct ttctttgttt ggaaaggtct ctaaactttt cgtaatctgc
     5041 aattacctcg ggatcagata aaattgttcc gagctctgta tatttttctt cgatttgaag
     5101 aattttgtct aacatatctt tcataattta tttttccttt taataaaata ttatctcaaa
     5161 catgctgatt tgataatctt aaaaaagtaa tgcatttatc tgagtaaatc ttttttttga
     5221 ttaactcaaa accatcaata ttgatttcaa gccgtgatgg atgctcaaga ataataattc
     5281 catctttttt taaaacatca cactgtctaa caatctctaa aactgaatca taaagcccgc
     5341 tttgatatgg cgggtcaaca taaataacat caaaatcaga gtctgttttt tttaaaactt
     5401 ttaaagtatc acccataaaa aattgcggct caattccaag cttttttgca ttgtctttta
     5461 atagaaaaaa agtttttttg tctttttcaa taaaacaaac ctgttcaaat cctcttgaaa
     5521 gagcctcaaa cccgataata ccggagccgg caaacgcatc taaaaaagat ttcttttcaa
     5581 aatccgtgat agaatacagc acgctaaaaa tactctcgcg cacctgtgaa agggtgggcc
     5641 tgacatttgc tcctttaggg gattctattt ttcttgattt taaataaccg cctgtgatgt
     5701 gcatgtaaaa attttaacac gaagccgcaa aattttttat ttacgcattt ataattatag
     5761 tcaacagaca taaaaggttt ttatgaacag aaatataata aaaagttttg tatacccttt
     5821 aaaaatatcc aaaggtactt tccaagcaag aatgattaga agcaatgagc aagctgtgca
     5881 gtattttaat gcgactgtca gaaattttag cgacggtgat gtacatttaa aaacacttga
     5941 gaaaaatatg aatgatatag ttaattatcc gttaataaat gttaggtttt tcggacatag
     6001 acatgtaaat tcttcatcat ttgttcactt tgacagtgat agcccgatat taagagttgc
     6061 aattccagct gctgaaaccc tcaacaggct ggaaaaaaca gtgtttggta aaattattaa
     6121 taaaaatgtt gaagaaccaa atcatgaagc tttacatatt tttgatttga taaataatcc
     6181 caaaattgta gctcgtgctt tgnnttcaaa aaaatttaaa cagattgatg agttttttac
     6241 aaatcatttg tatggaaact ttaatgatac caaacatatg agccgaaata tagttaagat
     6301 tgaaaattcg cttagaaaat ttttaaagaa tacgaaatta caagagcaga taaatatact
     6361 tcagtattat agaaataatt gtttgatgga atccagagca tataactggg gagcaaagtg
     6421 ccagcaaaaa tttaatacgg aacaaaattg taaagaatca cttgtgcatt tgtttcaatt
     6481 ttcaatattt tttaaaagaa aatatgaaat gctcaacaaa ctcttatttg aaacaattga
     6541 aaaagaacgt ataaaaatgc ataaaagaag atagctattt gagcattgct tttttgagct
     6601 cgtaaatttc ttctatatct tctttacaaa gctcttttgc tccgcccaac agcatagaat
     6661 ttagatatat ctgagcaaaa gtttctgctg tttccatcag gtaataggcg tttttcaaat
     6721 ctttagcccc tataattatc ccgtgatttg ccagcaaaac cgcatcatgt tttgcaaaat
     6781 actttgcagt attttctacc agcttgtctg aacccggcag tgcataaggc gctacaggta
     6841 tctcgccaaa ataaaaaaca ttttctgaaa ttataggctt tgataacggt atttgacaaa
     6901 cagcaaatgc agacgcataa ggcgaatgac agtgcacaat agcattgata tccggcctca
     6961 tttcataaat ggcaatatgc aaattctttt ccgaagaggg ttttctactt ccctcaataa
     7021 cattagcatg cttgtccatc aaaacgattt catcttcgga taaatcagca agacaggttc
     7081 ctgacgctgt aatcagaatg ttattttcaa cacgaacgct tatgtttcct gacgttgccg
     7141 gtgacatatt tttttcaccg agttttgcac cgtatttgat aatagatttt ttaatttcca
     7201 aaatattatt tctactcatg taatttattt taccaaattt cttattaaaa tgatataata
     7261 aaatagttaa gtgagagagg aaaatttttt gtctgaaatt ataaatttcg aacaagttac
     7321 tcagtggctt gaggaatacc aaaaaataga ttcacaaaag caaaaagacc agcttcaaaa
     7381 tcttatagct attacgtgca tgccgctcgt aaaaaaagtt gcgcgcacac ttgcaagaag
     7441 aagcactgac cctgtggaag atataataca ggtgggcagt ctcggtctta ttaaagcaat
     7501 caggctctac aaccctgaaa taagcagaaa tttcaaatct tatgcaacat atcttataac
     7561 aggtgaaatt agacattatc ttagagacaa agcttctatg ataaaagctc ctagagcaat
     7621 tcaggagctt gcataccgtg tgcataaaat gacactcgaa cttatagaag aaatgggaga
     7681 aaaaccaaca gatcaccaaa ttgccgataa aatggaactc cccgtagata aggtaaaaga
     7741 agcaatagat gcagacagaa gaaaaacaac tttgtcatta gaccagttga gttttcaaga
     7801 tgatgatgac aatttttcaa actggagcga caaaattgcc gatgtaaatt acgaaaatct
     7861 gcaaagtctg agagaagacc gcataatgct gacagaatct cttcagaata ttgaaccgga
     7921 actcaaaaaa attgtagaac taacttattt taaagatatg agccaggtag aaattgccaa
     7981 cacaatggga atttcgcaga tgcaggtgtc aagaaaactc aaaaaagcac ttaacctact
     8041 ttatgacata attaatgaaa aacaaagcgc ctgagcgcat aaggagctgt aatggattgg
     8101 ttctggacgg tatatgcatt tgtaataggc ctttgtatcg gcagtttttt aaatgtagtt
     8161 gttctaagag gcttttcggg cgaatcaatt gtgcttccgc cgtctcactg ccctaaatgt
     8221 gaccacaaac ttgcctggta tgacaatata ccggtgttct cttatctact gctgggcgga
     8281 aaatgcagat actgcaaaga aaaaatcagt atccagtatc ctgtcgtgga gctttttacc
     8341 gggataattt ttgcgggtat ttattataaa tattctttgg gcttgactga aatttttaat
     8401 gtaaatatcc tgtttttgtg gattgcagca gcattatgca tagcaatgac tgttacggac
     8461 atcaaagaaa aagttatatt tgtaatacac acatacctcc ttgcagggtt aggccttgtt
     8521 tataactttt ttaatatcgg tgcacaaaat tcggctaaaa taactctttg gcttgcaggt
     8581 tttaaattaa ctgtttatca atcttttatt tactctatac ttggccttgt agcaggcttt
     8641 ttcgtgcttt ttacaattgc caaaattgct aagtttatta ccaaaaaaga ttgctttggt
     8701 gatggcgatg cttatatcct gggggcattg ggcgcttttt tcggagtttc taatgctatt
     8761 gtaatcttga ttttaagcat ttttatctgg ggcggatttg caataccggt gtttttgtat
     8821 aaatggttta aaaacaaaga atataagctc ttgtcaggca tgctgctttt tattattaca
     8881 actgctttgt ttttgacagg cgaatatctg aatattttca catcagatat gttcaga
//
LOCUS       DABS01000118            8272 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_18339, whole genome shotgun sequence.
ACCESSION   DABS01000118 DABS01000000
VERSION     DABS01000118.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8272)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8272)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8272
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..749
                     /locus_tag="CPT85_04700"
     CDS             <1..749
                     /locus_tag="CPT85_04700"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23639.1"
                     /translation="TVQQKQQAPAEPPKAQAPEKTSLEKLQAELKDKYKKLTDDQVKA
                     KYQEAFDPAKKMDIEEYKILKKEMARRFEIDAPNFKGSAVEMHHEIHGANCHIRSDIA
                     ENGKPVVMKKIVDKMDADFSNLTPTNEAFTVYRGRSKHPVANSLNTDFNIIENAKIGD
                     IITPDTGYPYAAFHRKLAECWGGTGANCGKGTMMMEIRVPKGAKLSCNLEHGGEAIFP
                     RSSQFKLISKGKDPEGIMNVVLEYILPQAK"
     gene            complement(753..941)
                     /locus_tag="CPT85_04705"
     CDS             complement(753..941)
                     /locus_tag="CPT85_04705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005011831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23640.1"
                     /translation="MLYDNPSTKNFVGVMFTCCGVYGRVYKNKEGTAYVGRCPKCLKS
                     IRMKIGEGGCNARFFYAG"
     gene            complement(1011..1229)
                     /locus_tag="CPT85_04710"
     CDS             complement(1011..1229)
                     /locus_tag="CPT85_04710"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23641.1"
                     /translation="MLRSRDMGRSIAVRRWTNTALECYKRGCVCEGCFYTDFFNGTAQ
                     KCQMKASVLELVRVLGKPDVDIPQVLSD"
     gene            1631..3250
                     /gene="fliF"
                     /locus_tag="CPT85_04715"
     CDS             1631..3250
                     /gene="fliF"
                     /locus_tag="CPT85_04715"
                     /inference="COORDINATES: protein motif:HMM:TIGR00206"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="DAB23642.1"
                     /translation="MVSKINSDKGEILENNYFKLFLDDLTKLWNGLEIGQKFGIVMLS
                     VITLVISVFFVMKSMEPNWAVLYSDLSPQDAAAVSESLKKSGYPFKVSADKKSVLVPQ
                     EMQDELRIYVAENDLIQDSSPGFELLDDMQLGSTDFKNKLTKQRIYQGELTRSIERMS
                     GVRKARVQIADPERSVFSERDEAPTASVMLILEPGYKLKTSQVKAIKNLVAYAIPRLT
                     PEKVFLTDQAGNNLSDEIEKNSNDIESYKTNFENQTAKKVQSVLDKIVGPDNASVQVS
                     ADIDFNSTRSTIESYTPVGDTQQGVLTSTQTETENYDNPYPNTTGAVTGSNNPPPVNT
                     QTGQPKNLNYQKEKTASTYAVSKEIKQIVYAPGSVKRMTIAVAVNKILTANEKEELNK
                     LIATASGADLNRGDVINVTSLEFSAKDQNQEAAKAEEQAIRNEKTQEIVVNKLVPMMV
                     ILILGLVALFVFRSLFGKSGETTDEFDDGFNEQQQTITDNLIDKFEVESLPQIEARLN
                     PELDKLKTDLTDTIMADPSEAAKILISYIKD"
     gene            3258..4280
                     /gene="fliG"
                     /locus_tag="CPT85_04720"
     CDS             3258..4280
                     /gene="fliG"
                     /locus_tag="CPT85_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007934871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="DAB23643.1"
                     /translation="MAEITYESMTQRQKVAALLIALGPSTASEILKNIKDDDILEQIT
                     FDIASLNKVPSEILNQVLEEFHSLFLASDYLSSGGTQYARTLLEKAYGAEQAQNMLGR
                     LVNLLTTNPFQFFNDADPSQLATSFQNENPQLIALILAYLKPENSAKVLNSLPAEVQA
                     QVAFKIADMNSTNPEIISEIEKIVEGKFSSVVAQDFSKAGGVGALANILNRSDRATEK
                     NVLEYLEVKNLELAEGVRELMFVFEDIIQLKDNAIQRIIREVETKDLAISLKGTREEI
                     KEKIYNNMSERAQAMLKEELEYMGPVRAKEVQEKQTKIVGIIRALESAGEIVITRDTA
                     EDEYIE"
     gene            4273..5073
                     /locus_tag="CPT85_04725"
     CDS             4273..5073
                     /locus_tag="CPT85_04725"
                     /inference="COORDINATES: protein motif:HMM:PF02108.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23644.1"
                     /translation="MSRIESGKISLGNSYVLNADGQAKANKEISDAKILADSIIAEAQ
                     KKAQATLTQAQQQADSLVAQAKAQAEAEKEQITAESRKMGYEDGYQDGKEKITTELEN
                     LVYNVNNFAKCQFDMKNRIIKSIHTDILDMVLDISEKICLTELRQNKEILTKIVANAI
                     SQLKEKESVTIIVNPEMARKIYEISNDLKDAIHNLEHIKIVEDSTIAPDGTIVESVGS
                     RVDARVSAQIEQIAQKLFAELNKTPEIELARELDDVEAQLNNDKPEQI"
     gene            5051..6370
                     /gene="fliI"
                     /locus_tag="CPT85_04730"
     CDS             5051..6370
                     /gene="fliI"
                     /locus_tag="CPT85_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013120407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="DAB23645.1"
                     /translation="MINLNRYKNIINQTKTMQEVGKVIQIIGLIIEADGPKASIGDLC
                     YIYNKLDAEPIWAEVVGFKTQKILLMPLGSMEGLMPGAVVMNTGSSMQIKVGPQLLGR
                     VLDGLGRPIDNLGEINTQSLYSTQAEIINPLNRQLIRTPLSLGIRAIDAFITAGKGQR
                     LGVFAGSGVGKSTTLAMMAKNTNADLNVIALIGERGREVREFIETTLGPEGMRRSIVV
                     VATSEQPSLVKIKAGFVATAIAEYFRDQGKDVLFMLDSVTRIAMAQREVGLAVGEPPA
                     TRGYTPSVFALMPKLLERAGSNEYGTITGLYTVLVEGDDFNEPISDTARSILDGHIML
                     SRELAHKNHYPAVDVLQSVSRVMKEVTSKEHVGAAGKIRTLLAGYKKNEDLINIGAYV
                     NGADPVTDQAIKFMPQINNFLQQKVDEKTTYDETIAALMQLGNQIKL"
     gene            complement(6371..7792)
                     /locus_tag="CPT85_04735"
     CDS             complement(6371..7792)
                     /locus_tag="CPT85_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016101732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound O-acyltransferase family protein"
                     /protein_id="DAB23646.1"
                     /translation="MLFNSLEFLFIFLPVTFVVYFALNKARLIKLALGWLVGASLFFY
                     AFWNIKYLVLILCSMLFNYTVGYTLSHPSSLKINRKALFIFGLLGNLALLCYFKYFNF
                     LIDNLNMVLHTGFDTLKIALPLGISFFTFTQIAYLSDAYKKEVQEYDFLNYALFVTFF
                     PHLIAGPILHHSEMMPQFADLRRKIINHKNISIGLFLLAIGLCKKVLIADNLAPYVHM
                     VFDNQGAVLSFFNTNIAALAYTFQLYFDFSGYSDMALGIGYLFNIVLPVNFNSPYIAD
                     SIQDFWHRWHMTLSRFLKNYVYIPLGGNRKGEAATYRNLFLTFLIGGIWHGANFTFIA
                     WGILHGLASVVHRYWKSFKIKLNHTIAVVITFLFINITWVFFRSPSIHRAFEVLKSML
                     GFNGLGSLDIHKMHFVSGWGNEKLSVMLFLACFVLVFFVKNSMYWAGKIKPNKIYFTA
                     TLIMLIIAVLSLNTVSEFLYFQF"
     gene            complement(7782..>8272)
                     /locus_tag="CPT85_04740"
     CDS             complement(7782..>8272)
                     /locus_tag="CPT85_04740"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23647.1"
                     /translation="LEYNIAYGNNSIDTEKIRALNDFYIWQKSLGRDVTLFTMPSHVS
                     EFYLIYKNGCRKDYELWKKELSQIAPVYDFQYPNKYTTDKIAPDMQTYFDASHSTYLV
                     GNKIMEDIVQGKTDFARLLTKDNVEQYNRQNFIDLQTWAKNNKDMLDWINNTLKEEKN
                     AI"
BASE COUNT         2906 a         1741 c         1571 g         2054 t
ORIGIN      
        1 cgacagtaca acaaaaacaa caggctccag cagaaccacc caaagctcaa gcacctgaaa
       61 aaacatcatt ggaaaaactt caagcagaac tgaaggataa atataaaaaa ttaacagatg
      121 atcaggtaaa agcaaaatat caagaagctt ttgaccctgc aaaaaaaatg gatattgaag
      181 aatataaaat cctcaaaaaa gaaatggcaa gacgttttga aatagatgcc cccaatttta
      241 aaggctccgc agtagagatg caccatgaaa tacacggcgc caattgccat attagatccg
      301 atattgcaga aaacggcaaa cccgtagtta tgaaaaaaat tgtagataaa atggatgctg
      361 attttagcaa cctcactcca accaatgagg catttacagt atacagagga aggagcaaac
      421 accctgttgc gaattcctta aacacagatt ttaacataat agaaaacgct aaaattggcg
      481 atatcattac ccctgataca ggataccctt atgcagcatt ccacagaaaa ctcgcagaat
      541 gctggggagg cacaggtgca aattgcggaa aaggcacaat gatgatggaa ataagagtgc
      601 ctaaaggtgc aaaactatca tgcaaccttg aacacggagg agaagcaatc ttcccgcgca
      661 gctcacaatt caaacttatt tctaaaggaa aagaccctga aggcataatg aatgttgtat
      721 tagagtacat tctgcctcaa gcaaaataaa ccttaacccg cataaaagaa tctggcattg
      781 catccgcctt cgcctatttt catgcggatg gatttcagac atttagggca tctgcctaca
      841 taggcggtgc cttctttgtt tttgtatacc ctgccgtaaa caccgcagca ggtaaacata
      901 acacctacaa aatttttggt tgacggatta tcgtataaca tttttaatgc cttattgcaa
      961 ataaataaag tctgcttaca ataatattat accactattc aaacagaatg ttagtctgat
     1021 aaaacctgtg gaatatcaac atcaggcttg cccaaaaccc ttaccaattc caaaacggat
     1081 gctttcatct gacatttttg tgctgttcca ttaaaaaagt ctgtatagaa acaaccttca
     1141 caaacgcagc ctcttttata acattccaaa gccgtgttag tccatcttct tacggcaata
     1201 gatcttccca tgtctctgct tctaagcact aatttttcct cccaaaatag gtcccatccc
     1261 catggtattt ttagcagcca tgcctgtaaa ccctacagcc gtatgcatga ctggccttct
     1321 tttttctatt atatagacaa aaaccctttt tacaagccaa tcatgaggat atgttaagat
     1381 atattgcaat cgctgtattt cttaaaactc aacagtttca aggttttcga ccatccgtat
     1441 catgcacggt tacatggttt cgacggtttg acaccatgga aaccatgtct gcgtccatgt
     1501 ttccatgcaa attggcacgg gttaagaaat gtaaaaattt gtcaaatcga tacggacatg
     1561 ctctcaaatt aacgtaaatt aacatatttg aactgcctga aaaaatagtc tatattttta
     1621 atataggtga atagtaagca aaattaattc agacaaaggg gaaatcttgg aaaataatta
     1681 ttttaagctg ttcttggatg atttgactaa gctctggaac ggtttagaaa taggacaaaa
     1741 attcggaata gttatgctaa gcgtgataac actggttata tcggtgtttt ttgtaatgaa
     1801 atcaatggag ccaaactggg cggttttata ctccgacctt tctccgcaag acgcagcagc
     1861 agtatctgaa agccttaaaa aaagcggcta cccctttaaa gtgtctgcgg ataaaaaatc
     1921 agtcctcgtt cctcaggaaa tgcaagacga actcaggata tacgttgcag aaaatgacct
     1981 tattcaagat tcttcaccgg ggtttgaact gctggatgac atgcagttag gttctactga
     2041 ttttaaaaac aaactcacaa aacaaagaat ctaccaagga gaacttaccc gttcaataga
     2101 aagaatgagc ggtgtaagaa aagcccgtgt gcagattgca gaccccgagc gttcagtatt
     2161 ttcggaaaga gacgaagcgc ctacagcttc tgtaatgctc attttagaac cgggatacaa
     2221 acttaaaacc tcacaggtta aagctatcaa aaaccttgtt gcttacgcaa taccaagatt
     2281 aacaccggaa aaagttttcc tcacagacca ggcaggcaac aatctttctg atgaaataga
     2341 aaaaaattca aacgatatag aatcatacaa aacaaacttt gaaaaccaga cagcaaaaaa
     2401 agtacaatct gttctggata aaatagtagg gccggacaat gcatctgttc aggttagcgc
     2461 ggatatagac tttaactcta cacgttccac aatcgaaagc tatacacctg taggcgacac
     2521 acaacaaggg gttttgactt ccacacaaac tgaaactgaa aactacgata acccttaccc
     2581 caatacaaca ggcgcggtaa caggctcaaa caatccgccg ccggttaaca cccaaacagg
     2641 ccagcccaaa aacttgaact atcaaaaaga aaaaacagcc tccacatatg ctgtgtctaa
     2701 agaaattaaa caaatagttt acgcgcccgg ctctgtaaaa agaatgacca ttgccgttgc
     2761 agtgaacaaa atcctcactg ccaacgaaaa agaagaactc aataaactca ttgccacagc
     2821 aagcggcgct gaccttaata gaggcgatgt tatcaacgtt acaagccttg aattttcagc
     2881 aaaagaccag aaccaggaag ctgctaaagc agaagaacag gctatcagaa acgaaaaaac
     2941 acaagaaatt gttgttaaca aacttgttcc tatgatggtt atactcatac tcggacttgt
     3001 tgccctgttt gtattccgct ctctgtttgg caaatcagga gaaactacag acgagtttga
     3061 tgacggattt aatgaacagc agcaaaccat cactgacaac ctcatagaca agtttgaggt
     3121 tgaatctctt ccgcaaattg aagcaaggct taatcccgag cttgataaac taaaaacaga
     3181 ccttactgac actatcatgg cagacccgtc agaagctgca aaaattctta tctcatatat
     3241 taaggactaa ttaaaaaatg gcagaaataa catacgaatc tatgacacaa agacaaaaag
     3301 tcgcagcgct tttgattgcg ctggggccaa gcactgcgtc agagattctt aaaaatatta
     3361 aagacgatga tatcctcgag cagattacat ttgatattgc aagtttgaat aaagtacctt
     3421 cagagatact caatcaggta ttggaggaat tccactcgct ttttttagcc agtgattacc
     3481 tctcgtcagg gggtactcaa tacgcaagaa ctttgcttga aaaagcttac ggtgcggaac
     3541 aggcacaaaa catgctcggc agactggtta atttgcttac cacaaaccct tttcaatttt
     3601 tcaacgacgc tgacccgtcc cagcttgcca catcgtttca aaacgaaaac ccgcagctga
     3661 ttgcgcttat ccttgcttac ttaaaacccg aaaactctgc aaaggtgctt aacagccttc
     3721 cggcagaagt acaggctcag gtggcgttta aaattgcaga catgaattcc acaaacccgg
     3781 agattatatc ggaaattgaa aaaattgtag aaggaaaatt ctcttccgtt gtagctcaag
     3841 acttctcaaa agcgggcggt gtaggcgctc tggccaacat tttgaaccgt tcggaccgtg
     3901 caacagaaaa gaacgtactg gaatatctcg aagtcaaaaa cctcgagctt gcagaaggcg
     3961 taagagagct gatgttcgta ttcgaagaca ttatccagct taaagacaat gctattcaaa
     4021 gaatcatccg cgaagtagaa acaaaagacc ttgccatatc tttaaaaggt acgcgtgaag
     4081 aaattaaaga aaaaatctac aataacatgt cagagcgtgc tcaggcaatg ctcaaagaag
     4141 aactcgaata catgggccct gtcagagcaa aagaagtaca ggaaaaacag acaaaaattg
     4201 ttggtattat ccgtgcactt gaatctgcgg gtgaaatcgt cataactaga gacacagccg
     4261 aggacgaata cattgagtag gatagaaagc ggcaaaataa gcctgggtaa ttcatatgtc
     4321 ttaaacgctg acggacaggc caaggcaaac aaagaaatat cagatgcaaa aattctcgcc
     4381 gattccatca ttgcagaggc gcagaaaaaa gcacaggcaa cactgacaca ggcgcagcaa
     4441 caggccgatt ctcttgttgc gcaagcaaaa gcccaagctg aagctgaaaa agagcaaatt
     4501 actgcagaat caagaaaaat gggctacgaa gacggatatc aagatggaaa agaaaaaatc
     4561 acaaccgagc ttgaaaacct tgtctacaac gtaaacaact ttgccaaatg ccagtttgat
     4621 atgaaaaaca ggataataaa atcaatccac acagatattt tagacatggt gcttgatatt
     4681 tccgaaaaaa tttgccttac agaactaaga caaaacaaag aaatcctgac aaaaattgtt
     4741 gccaacgcta tctcccagct gaaagaaaaa gaaagcgtaa caatcattgt aaaccctgaa
     4801 atggcaagaa aaatttatga aatttcaaac gatttgaaag atgcaataca caatcttgaa
     4861 cacataaaaa tcgttgaaga ctcaacaatt gcgcctgacg gaacaattgt tgaatccgta
     4921 ggctcaagag tagatgcaag ggtaagcgca cagattgaac aaatcgcaca aaagctcttc
     4981 gccgagctta acaaaactcc ggaaatagag ctggcacgcg aacttgatga tgttgaagca
     5041 caactgaata atgataaacc tgaacagata taaaaacata atcaaccaga caaaaaccat
     5101 gcaggaagtt ggaaaagtca tccagattat cgggctgata atcgaagctg acggcccaaa
     5161 agccagcata ggcgaccttt gttatattta taacaaactg gacgctgaac ctatatgggc
     5221 agaggttgta gggtttaaaa cgcaaaagat tctcttgatg ccgcttggct caatggaagg
     5281 tctcatgccg ggcgctgttg taatgaatac aggctcatcc atgcagatta aagtaggccc
     5341 gcagctgtta ggccgtgtgt tagacggcct tggccgcccg attgacaatc ttggcgagat
     5401 caacacccag tctttgtatt ccacacaggc agaaatcatt aacccgctga acagacagct
     5461 gataagaacc ccgctgtctc tcggaatccg tgcaatagat gcttttatca ctgcgggtaa
     5521 aggccaaagg ctcggtgtat tcgcaggttc tggggtaggg aaatcaacaa cccttgcaat
     5581 gatggccaaa aacacaaacg cagacttaaa cgtaattgca ctcataggag aacgcggacg
     5641 cgaggtaaga gagtttatcg aaacaaccct cggcccggaa ggaatgaggc gctcaatcgt
     5701 tgttgttgcg acatcagagc agccttcact tgtaaaaatc aaagcaggct ttgttgcaac
     5761 tgctattgca gagtacttta gagaccaggg caaagacgta ctgttcatgc ttgacagtgt
     5821 aacgcgtatt gcaatggccc aaagagaagt cggactggca gtaggcgagc cgcctgcaac
     5881 aagaggctac acgccttctg tttttgctct tatgccaaag ctgcttgagc gcgccggaag
     5941 caacgaatac ggtactatta caggacttta cacagtactt gtagaaggtg atgactttaa
     6001 cgagcccatc tccgatacag caagaagtat tcttgacggg cacatcatgc tctcacgtga
     6061 gcttgcgcat aaaaaccatt accctgctgt tgacgtgctt caaagcgtca gccgtgtaat
     6121 gaaagaagta acctcaaaag agcacgttgg agctgccgga aaaataagaa ccctacttgc
     6181 cgggtacaag aaaaacgaag acctgataaa catcggtgcc tacgttaacg gtgccgaccc
     6241 cgtgaccgat caggcaataa aatttatgcc gcagataaac aatttccttc aacaaaaagt
     6301 tgatgaaaaa accacctacg acgaaaccat agcagcgctc atgcagcttg gtaatcagat
     6361 aaagctctga ttaaaactga aaatacaaaa actctgaaac cgtatttaat gacagaaccg
     6421 caattatcag cataatcaaa gtagcagtaa aataaatttt gttaggcttg attttgcctg
     6481 cccaatacat tgaatttttt acaaagaaca ccagcacaaa acatgccaaa aacagcatta
     6541 cactaagctt ttcatttccc cagccgctta caaagtgcat tttgtgaata tcaagagaac
     6601 ccagaccatt aaatccaagc attgacttta gcacctcaaa agcacggtgt attgaggggc
     6661 tcctaaaaaa tacccaggta atgtttataa acaaaaatgt tattacaaca gcaatcgtat
     6721 ggtttaattt tatcttgaaa cttttccaat aacgatgtac tacactggca agtccgtgca
     6781 aaatacccca ggcaataaac gtaaaatttg caccgtgcca tataccgcca attaagaaag
     6841 ttaaaaataa atttctataa gttgccgctt cgccttttct attgccgcca agcgggatat
     6901 aaacataatt ctttaaaaac cttgataaag tcatatgcca cctgtgccaa aagtcttgaa
     6961 tgctgtcagc aatatatgga gaattaaagt ttacaggaag cacaatattg aacaaataac
     7021 ctatgccaag tgccatgtca gagtatcccg aaaaatcaaa atacagctga aaggtataag
     7081 caagtgcagc tatattggtg ttaaaaaacg ataaaacagc gccttgatta tcaaagacca
     7141 tatgcacata cggcgcaaga ttatccgcaa tcagaacctt tttgcacagc ccaattgcaa
     7201 gcaaaaacaa accaattgaa atatttttgt ggttaataat ttttcttctc aaatctgcaa
     7261 actgtggcat catttcactg tggtggagaa taggccctgc aatcaaatga ggaaaaaatg
     7321 ttacaaataa agcatagttt aaaaaatcat actcctgtac ttctttttta taagcgtctg
     7381 aaagatacgc aatctgcgta aatgtaaaaa agcttatccc aagcggcaaa gctattttga
     7441 gagtatcaaa ccctgtgtgc agcaccatat ttaaattgtc tattaaaaag ttaaaatatt
     7501 tgaaatagca caaaagagca agattgccca aaagaccaaa tataaaaagc gcttttctgt
     7561 taatttttaa agaagacgga tgagataacg tatagcccac agtataatta aataacattg
     7621 aacagagaat caataccaga tattttatat tccagaaggc ataaaaaaac aatgaagcac
     7681 ccacaagcca ccctagggca agctttatga gtcttgcttt gttcaaagca aaataaacaa
     7741 caaacgttac aggtaaaaat ataaacaaaa attccagtga attaaatagc atttttttcc
     7801 tcttttaaag tgttatttat ccaatcgagc atatctttat tgttttttgc ccatgtttga
     7861 aggtctataa aattttgcct gttatattgc tctacgttat cctttgtgag caatcttgca
     7921 aagtctgttt tgccctgcac aatatcttcc ataattttgt tacccacaag atacgtgcta
     7981 tgagatgcgt caaaatacgt ttgcatatcc ggtgcaattt tgtctgttgt gtatttgttc
     8041 ggatactgaa aatcatacac cggtgctatt tgagacagtt cttttttcca cagttcataa
     8101 tctttgcggc agccgttttt gtaaatcaaa taaaattcgc tcacatgaga aggcatagta
     8161 aataacgtaa catctctacc gagcgacttt tgccaaatgt aaaaatcatt taaagcccgg
     8221 attttttccg tgtctatcga gttgttacca taagcaatgt tgtattctag cc
//
LOCUS       DABS01000119            8905 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_17550, whole genome shotgun sequence.
ACCESSION   DABS01000119 DABS01000000
VERSION     DABS01000119.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8905)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8905)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8905
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            171..1493
                     /gene="rimO"
                     /locus_tag="CPT85_04745"
     CDS             171..1493
                     /gene="rimO"
                     /locus_tag="CPT85_04745"
                     /inference="COORDINATES: protein motif:HMM:TIGR01125"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="DAB23549.1"
                     /translation="MKNKDIKIALINHGCAKNLVDSELMLGILAQDGFNITLNDKEAD
                     VVIINTCSFIHDAEKESVHSIIEMVNEGKKIIITGCLPQKHKHELKKAVPEAVAMLGT
                     SDIAKIADVIKKVTSEKQEYVCEISQNPVFVYPEHAQRQQITVGSSSYIKIADGCNYQ
                     CGYCVIPQLRGPYRSRPIENIVQEAKELGKKGVSEIVLIAQDTTGYGIDLYKKPSLAK
                     LLKELNKIEDINWIRVMYTYPSMFDDELIDAFANCDKVVKYVDIPLQHSHPDMLKAMR
                     RPVIDYRGFINKLREKIKDVAIRTTFIVGYPGETQEMFDDLYEFTKWAKFDKMGAFEF
                     SREKNTYAYSLPEQIPSRVKKQRKNKLMKLQQKISREVNESFEGREIPCIIESVTSEG
                     VVIARSYRDAPEVDGLVYVEAQELLVPGDIETVKITGCDDYDLFGVVV"
     gene            complement(1490..2029)
                     /locus_tag="CPT85_04750"
     CDS             complement(1490..2029)
                     /locus_tag="CPT85_04750"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23550.1"
                     /translation="MTQGVNFFTNPNAPSSNAMRLLAMQNAMPVRAASESIEDYNKRM
                     AQWKDELKAKQKAENSEILQGLIAGVDTKISTDIHSLKNTNSAIEKLKFWQYVLEGYD
                     TNLDSQISALKAKQGLIQQQIEKIKKQGEQKEKLDIRDGLGLRSAAEEETLLSSLAAP
                     KTGMFDNDELKTGSRNILG"
     gene            2243..2719
                     /locus_tag="CPT85_04755"
     CDS             2243..2719
                     /locus_tag="CPT85_04755"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23551.1"
                     /translation="MNTSNEEKITTPLTKMSSLSDEKDKFSSLSTSSMLARAGVPMSH
                     ILAADNYMFIKKIYGTPVVKSRITNKEKALLGKYDFNQLEYTTIRQINEELELLKKWS
                     MSLDENLKSDADKIIEIRAKELRYLAACRYTLITNEIYNGYMALEKYFEDISKYSL"
     gene            2808..3224
                     /locus_tag="CPT85_04760"
     CDS             2808..3224
                     /locus_tag="CPT85_04760"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23552.1"
                     /translation="MSKILFLISPTINSFTDKDKGSKANRTACAYSHLKNSVSSNIQI
                     AAAAGITAAVGHYKPGLKLEPPPKINWKNPKEAAKNLIKDFKAAPRYLRIAAFAAIAL
                     SLINRTYKKIEIEHKYEDRAILEETKKEREEKLNSK"
     gene            3332..3709
                     /locus_tag="CPT85_04765"
     CDS             3332..3709
                     /locus_tag="CPT85_04765"
                     /inference="COORDINATES: protein motif:HMM:PF00933.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23553.1"
                     /translation="MKGRIRMQIQNLLMHXIFFTQNICDKERFKAAVHMIKEDALFAP
                     FLSIDQEGGRVERTLNLYGGPHYLSARNAAKQGEKTVEQQVQWISQELTYLGLNMNFA
                     PVLDVDTNSNNPIIADRAYSXXL"
     assembly_gap    3377..3379
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    3700..3701
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3721..4245
                     /locus_tag="CPT85_04770"
     CDS             3721..4245
                     /locus_tag="CPT85_04770"
                     /inference="COORDINATES: protein motif:HMM:PF00933.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23554.1"
                     /translation="MAARTYTKNGIIPVGKHFPGHGETSTDSHKEMPEVNLSIEEMEN
                     VHIKPFKQLLNELPAIMVAHVHYSAFNKEKIPASISPEVIDGYLRNTLKYKGIVISDD
                     MVMGGIRRFTPFEACKRAINAGVNMFIYRNTDESVIELIAKLIEAVKNGEIPEEKIDK
                     SFEYIKTLKNVAKL"
     gene            4346..4702
                     /gene="rplS"
                     /locus_tag="CPT85_04775"
     CDS             4346..4702
                     /gene="rplS"
                     /locus_tag="CPT85_04775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014195437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="DAB23555.1"
                     /translation="MNPIVEALGKKHIENNNLPELNPGDTVKVFVRIIEGNKERTQAF
                     EGIIIKKRGSGVGKTITVRKTFQGVGVERVFPVYSPRLEKIQVVRRGDVRRAKLYYLR
                     ERSGKATRIKEKIEKR"
     gene            4777..5628
                     /gene="ylqF"
                     /locus_tag="CPT85_04780"
     CDS             4777..5628
                     /gene="ylqF"
                     /locus_tag="CPT85_04780"
                     /inference="COORDINATES: protein motif:HMM:TIGR03596"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="DAB23556.1"
                     /translation="MAHIHWYPGHIAKAEKKLKELINLVDVVIEVLDARIPDSSVYPD
                     IKKLLGEKPRLIVLNKADLADENALKQWIKHYQETSGFPVIASCASKNNDISTIVNKV
                     IELAKPRIDKLVAKGLLPRPARVVVVGMPNVGKSSIINKLIKKGKTKVGAKAGVTRQQ
                     QWVRVNPKIDLLDTPGIIPLKQEDQIKAGKLAMVNSVSENAYENEEVAAELLEILAQK
                     YPIKVKEYYNLDNEITLENIAKSRNWIVKNSEPDITRTAVMVLTDFRAGRIGRFILDD
                     NIDKTEQ"
     gene            5600..6289
                     /locus_tag="CPT85_04785"
     CDS             5600..6289
                     /locus_tag="CPT85_04785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005919344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="DAB23557.1"
                     /translation="MTTLIKQSNKIQELFSFDDANKKENNFDFIIGTDEAGRGPGAGP
                     VFAAAVCFKEHNMDLHNELSILNDSKKLSEKNREELYDIIKKHSIYFIQAGSVEDIEK
                     NNILNTSLNCMKLSCEQVQKQLGKAKTLTLVDGNKLIKKYAMAQKTVVKGDAKSASIA
                     AASILAKVSRDRFMDELAQKFPQYGWEQNKGYLTAKHVDAIKQYGPTKWHRAKFLRNI
                     LEDKTQQLGLF"
     gene            6376..6912
                     /locus_tag="CPT85_04790"
     CDS             6376..6912
                     /locus_tag="CPT85_04790"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23558.1"
                     /translation="MKKTLILLLIGMIVFSMASMDSLAAKKSKKSAGSITQEDMTSMS
                     ETIDRLTRKVYANSLFSPADNASMIEIKIKLDNQMLIAPDITLAPLYYKAANLYKARE
                     YKQEAIDCYQTILENFPDTALAPKAKQALTAMGIAVVEPNEKEGETTGQAANAPEEQT
                     TAAEQPAQPVEDTQASAQ"
     gene            7028..7339
                     /locus_tag="CPT85_04795"
     CDS             7028..7339
                     /locus_tag="CPT85_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014586892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin"
                     /protein_id="DAB23559.1"
                     /translation="MPHFENSCNVTHCDRKLTKEELIRGIRFNIAAEYEAIQLYEQIK
                     ESTDNELVHTVLTDIVNEEREHAGELFKLLITLDPEEAKYYGEGAHEVEDMMDGKKKP
                     R"
     gene            7353..7631
                     /locus_tag="CPT85_04800"
     CDS             7353..7631
                     /locus_tag="CPT85_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015052199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2769 domain-containing protein"
                     /protein_id="DAB23560.1"
                     /translation="MSQVEKTKENLQACNCLKCPSYTTSCKIKEMPHNMIDMLKGIEN
                     VEGLENLFCAYTKSRCIDEDKGCLCNVCTVHDKYDLEDGHYCITDGGY"
     assembly_gap    7643..7644
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7730..8176
                     /locus_tag="CPT85_04805"
     CDS             7730..8176
                     /locus_tag="CPT85_04805"
                     /inference="COORDINATES: protein motif:HMM:PF01957.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23561.1"
                     /translation="MELFHIFFQLWQIWCIAGVIFFIIEMFTPVMFFLNLGFACFIAA
                     IGAQMGIEPIYQVLVFGLFSAIFLIWLRPFLLKKKNGSDKPETVEMYIGKTANVLETV
                     TENNGRIAIFGEEWQAKSLNGETVEKGAQAKIVKNDSIIMYVVPIE"
     gene            8183..8758
                     /locus_tag="CPT85_04810"
     CDS             8183..8758
                     /locus_tag="CPT85_04810"
                     /inference="COORDINATES: protein motif:HMM:PF01145.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23562.1"
                     /translation="MIASLIVSLTALLVFIAIGYKCLIIVDKNEQAVXRLAKFDRVIG
                     EGVHLIIPFIEKLHGIEDPYNHKKFLNNGKISLEPDVISFPKDDREFFGKDKARMKLK
                     ADIVYKITDPYKAVYEAAYLFDALNQLFAGILQKRLIDADEGTNSAECLRDLTRSIID
                     IANEYAQNWGIKILEFNLKQITDGNGIRHNY"
     assembly_gap    8282..8283
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         3237 a         1581 c         1681 g         2397 t
ORIGIN      
        1 ctttgtccag gttttcaacg ttttgtgacc caaatttttt gagaaaagaa aacataatac
       61 acctcatatt tatataaact ctgggctaat aatatcataa atcgcgtata caataaataa
      121 cccgtacaga taatgctgtg attcagctat ttttcactta taattaattt atgaaaaata
      181 aagatataaa aattgcattg ataaaccacg gctgtgccaa aaaccttgta gactccgaat
      241 taatgctcgg aatcctggct caagatggat ttaacatcac actaaacgac aaggaagctg
      301 atgttgtaat aataaataca tgctcattta tccacgacgc agaaaaagag tctgtacatt
      361 caataataga aatggttaat gaaggcaaaa aaattataat caccggctgc ctcccccaaa
      421 aacacaaaca cgagcttaaa aaagccgtgc cggaagccgt tgcaatgctg ggtacttcag
      481 atattgccaa aatagctgat gtaataaaaa aagtaaccag cgaaaaacaa gaatatgttt
      541 gcgaaatatc acaaaaccct gtttttgttt atccggaaca cgctcaaaga caacagatta
      601 cagtaggctc cagctcttat ataaaaatag cagacggatg taactatcaa tgcggctatt
      661 gtgtaatccc gcagttaaga ggcccttacc gctcaagacc cattgaaaat attgttcaag
      721 aagcaaaaga actgggcaaa aaaggagtgt cggaaattgt cctgattgca caggacacaa
      781 caggttacgg tattgattta tacaaaaaac cttctctggc aaagctttta aaagaattaa
      841 acaaaattga agacattaac tggatacgtg taatgtacac atatccttcg atgtttgatg
      901 acgaattgat tgatgcattt gcaaattgcg acaaggttgt aaaatacgtc gatataccgc
      961 ttcaacactc ccaccccgat atgctaaaag caatgaggcg acctgttatt gattacagag
     1021 gttttatcaa taaattgaga gaaaaaataa aagatgtcgc aatcagaaca acatttattg
     1081 taggctatcc gggcgaaacc caagaaatgt ttgacgattt gtatgaattt acaaaatggg
     1141 caaaatttga caaaatgggt gcgtttgaat tttctagaga aaaaaacaca tatgcttact
     1201 ctcttccgga acaaattccc tcgcgtgtaa aaaaacagcg taaaaacaaa ttgatgaaac
     1261 tacaacaaaa aatctctaga gaagtgaacg aaagctttga aggaagagaa attccctgca
     1321 taatcgaatc tgtaacctct gaaggtgtag taattgcacg ttcttacaga gatgcaccgg
     1381 aagtagacgg ccttgtttat gtagaagcgc aagagcttct tgtgcccggt gacatcgaaa
     1441 ctgtaaaaat tacaggctgt gatgattacg atttattcgg cgtagtggtt tagccaagga
     1501 tatttcttga gcctgttttt aattcatcat tatcaaacat gcccgttttt ggagcggcca
     1561 gtgatgagag cagagtttct tcttctgctg cgcttcgcaa gcccagtcca tcgcggatat
     1621 ccagcttttc tttctgttca ccctgttttt ttatcttttc tatttgctgc tgtatcagcc
     1681 cctgctttgc tttgagtgct gatatttgtg aatccaaatt tgtatcatag ccttccagca
     1741 cgtattgcca gaatttcaat ttctcaatag cagagtttgt atttttcaat gaatgtatat
     1801 ccgttgaaat ttttgtatca actccggcta tcagaccttg cagtatttca gaattctcgg
     1861 ccttttgttt tgcttttagc tcatccttcc attgcgccat tcgtttgttg taatcttcaa
     1921 tgctttctga ggcagctctc acaggcattg cgttttgcat tgccagaagc cgcatcgcgt
     1981 tagaagacgg cgcattagga tttgtgaaaa aatttacacc ttgtgtcatt tcctctaatt
     2041 ccccaaatta attataattt tccctttata tatataaaaa caacttgtac aaaataattg
     2101 ccccccgatt tgtattagtc ctgtttaaac tttacaattc tacaaagtag catgacaaaa
     2161 aattaagggt gagataaaat tggtttatta aagatttttg agattaaaga ggattgggac
     2221 aattaacgag aatttttcaa atttgaatac ttctaacgag gaaaaaataa ctactccttt
     2281 gacaaaaatg agctcactct ctgatgaaaa agacaaattc agctccttga gtacatcctc
     2341 aatgcttgct cgtgcaggag tcccgatgtc tcacatactg gctgccgaca attatatgtt
     2401 tatcaaaaaa atatacggca caccggttgt aaaaagcaga attacaaaca aagaaaaagc
     2461 tcttttagga aaatacgact tcaaccagct tgaatacaca acaattaggc aaataaacga
     2521 agaacttgag cttttgaaaa aatggtcaat gtcacttgat gaaaacctca aaagtgatgc
     2581 tgacaaaatc attgaaataa gagcaaaaga actgcgctat cttgctgctt gcaggtacac
     2641 tcttatcaca aacgaaattt acaacggata tatggcactt gaaaaatatt ttgaagatat
     2701 ttcaaaatat tctttataag tattaaaatt tgtaaaacaa aatcgttaaa gtaacaaaaa
     2761 atttcatttt aagggtttat tacaacataa acttaatggt gtgtgttatg tctaaaattt
     2821 tatttttaat atctcccaca ataaattctt ttacagacaa agacaaaggc tcaaaagcca
     2881 acagaacagc ctgtgcatac agccatttaa aaaattctgt ttcatcaaat atccaaattg
     2941 ccgcagcagc aggtatcaca gccgcagttg gccattataa acctgggcta aaacttgaac
     3001 ccccacccaa aatcaactgg aaaaacccta aagaagctgc aaaaaacctt ataaaagact
     3061 ttaaagcagc accaagatat ttgagaatag cagcttttgc cgctattgcg ttgagcctta
     3121 tcaacagaac ttataaaaaa attgaaatag agcacaaata cgaagacaga gctattttgg
     3181 aagaaactaa aaaagaaaga gaagaaaagc tcaattcaaa ataaatttac aaatttttaa
     3241 accatcttca aaaacaaact gttgatgtaa aataaaaata tggaaaattt aacgctagaa
     3301 caaaaagttt atcaaatgtt tattctgggg tatgaagggg agaatccgca tgcaaatcca
     3361 gaatttatta atgcacnnna tattttttac acagaatatt tgtgataaag aaagattcaa
     3421 agctgcagtg catatgatta aggaagatgc attatttgcg ccatttttga gtattgatca
     3481 ggagggcggc agagtggaga gaacgctcaa tctttacggc ggaccgcact acctgagcgc
     3541 aagaaatgct gcaaaacagg gcgaaaaaac cgttgaacag caggtacagt ggatttcaca
     3601 ggagctgact tatctgggac tgaatatgaa ctttgcgccc gtgcttgatg ttgatacaaa
     3661 ttccaataac ccgataatcg cagacagagc ttattcaaan nagttgtaaa attcggctca
     3721 attgcagcaa ggacttatac aaaaaacgga ataatccctg taggcaagca tttcccgggc
     3781 catggagaaa caagcaccga ctctcataaa gaaatgccgg aagtaaacct tagcattgaa
     3841 gagatggaaa acgttcacat aaaacctttt aaacagctat taaatgaact tcctgcaatt
     3901 atggttgctc acgtacatta cagcgcattt aacaaagaaa aaattccggc ttcaatttca
     3961 ccggaggtga ttgacggata tttaagaaat acgcttaaat acaaaggcat agtgatttcc
     4021 gatgacatgg taatgggagg aataagaaga ttcacgccgt ttgaagcttg caagcgagct
     4081 attaacgccg gtgttaatat gttcatatac agaaacactg atgaatcagt tattgaactt
     4141 attgcaaagc tcatagaagc tgtcaaaaat ggagaaattc ccgaagaaaa gattgacaaa
     4201 agctttgaat acataaaaac attaaaaaat gttgctaaac tttaacgtaa gggggcatac
     4261 ccccttgata tatgaatatg ttttgattaa gatttattta ttgtcacaaa aatatgttta
     4321 taattagaaa taaaggaata aaacaatgaa tccgatagtt gaagcattag gaaaaaaaca
     4381 cattgaaaat aacaatctcc ctgaattaaa ccccggagat actgttaaag ttttcgtaag
     4441 aattatcgaa ggcaacaaag aaagaactca ggctttcgaa ggtattatta ttaaaaagag
     4501 aggttcaggc gtaggcaaaa ccatcactgt aagaaaaact ttccagggtg ttggtgttga
     4561 aagagtattc cctgtttact ctccacgttt agaaaaaatc caggttgtta gacgcggtga
     4621 cgttagaaga gctaaactct actacctcag agaacgttcc ggtaaagcaa caagaattaa
     4681 agaaaaaatt gaaaagcgtt aatcaacgct ttgaagcaaa aaatcataat aagcggcaat
     4741 tgaattgccg ctttatttat ataaaggagt ctatgtatgg cacatatcca ctggtacccc
     4801 ggacatattg caaaagcaga gaaaaagttg aaagaactca taaaccttgt agatgtggtt
     4861 attgaagtac ttgatgcacg catccctgac agctctgttt atcctgatat aaaaaaactt
     4921 ctgggagaaa aaccccgact cattgtactg aacaaagccg accttgcgga tgaaaatgcg
     4981 ctcaaacaat ggataaaaca ttatcaagaa acttcaggtt ttccggttat tgcttcttgt
     5041 gcatctaaaa acaatgatat ttcaactatc gtaaacaaag ttatagagct tgcaaaaccg
     5101 cgcatagaca agctggttgc caaagggctt ttaccacgcc cggcacgagt agtggttgtg
     5161 ggtatgccta acgtaggtaa atcgagtatt ataaataaac ttataaaaaa aggtaagaca
     5221 aaagtcggtg caaaagccgg tgttacacgc cagcagcagt gggtgagagt aaaccccaaa
     5281 atagatttgc tcgacacacc gggaataatc ccgttaaaac aggaagacca gattaaagca
     5341 ggaaaactgg caatggtcaa ttctgtcagc gaaaacgcat atgaaaacga agaagtggca
     5401 gcagagcttc tcgaaatact tgcgcaaaaa tacccgataa aggttaaaga atactacaat
     5461 ttagacaatg aaattacact tgaaaatata gccaaaagcc gcaactggat tgtcaaaaac
     5521 agtgaaccgg acataacaag aaccgctgtt atggtgctta cggattttcg tgcaggacgt
     5581 ataggaagat ttattctgga tgacaacatt gataaaacag agcaataaaa tacaagagct
     5641 tttttctttt gatgatgcaa acaaaaaaga aaacaacttt gattttatta taggaacaga
     5701 cgaagccgga agaggtccgg gggctgggcc tgtttttgca gcagctgtgt gttttaaaga
     5761 gcacaacatg gatttgcaca atgaactttc tatattaaat gattcaaaaa aattgtcaga
     5821 aaaaaacaga gaagagctct acgacatcat aaaaaaacat tcaatttatt ttatacaggc
     5881 cggaagtgta gaagatatag aaaaaaacaa tattttaaac acctccctaa actgcatgaa
     5941 attgtcatgc gagcaggttc aaaagcagct tggcaaggca aaaacgctta ctcttgttga
     6001 tggaaacaag ctcataaaaa aatatgcaat ggcgcaaaaa actgttgtaa aaggagatgc
     6061 taaatcagca tcaatagcgg ctgcaagcat tttagccaaa gtcagcagag acagatttat
     6121 ggatgagctt gcacaaaaat ttccgcaata cggctgggag caaaacaagg gctatcttac
     6181 agctaaacat gtggatgcaa ttaaacaata cggccccaca aaatggcaca gggcaaagtt
     6241 tttgagaaac atactcgaag acaaaacgca acagcttggg ttgttttaaa tttagaccat
     6301 atggttagtg taaaacacat gcatttaata tagaatatca ttagggcagg agtataaact
     6361 tttagaagaa agattatgaa aaagacttta attttattgt tgataggtat gattgtattt
     6421 tccatggcat ctatggactc gcttgctgca aaaaaatcaa aaaaatctgc aggttccata
     6481 acacaggaag acatgacttc aatgtcagaa acaattgata gattaacaag aaaagtttat
     6541 gcaaactctc ttttttcacc ggctgacaac gcaagtatga ttgaaataaa aatcaaactc
     6601 gataaccaga tgctgattgc gcccgatatt acacttgcac cattatatta caaagcagcc
     6661 aacctttata aagcaagaga atacaaacaa gaagcaattg actgctatca aactatttta
     6721 gaaaatttcc ctgatacagc ccttgccccc aaagcaaaac aggcactaac agctatgggt
     6781 attgcagtag tagagcctaa tgaaaaagaa ggcgagacaa ccgggcaggc tgccaatgca
     6841 ccggaagaac aaaccacagc tgcagaacaa cccgcacaac cggttgaaga tacgcaagca
     6901 tctgctcaat aaagatttgt aattttaatg atttgtttaa actatacatt ggctagcttt
     6961 tttgtgtgat taaaatgcta cattttgcgc ttagaatatg tctgcataca taatatggag
     7021 acaggatatg ccgcattttg aaaattcatg caacgtaacg cattgtgaca gaaaactcac
     7081 taaagaagaa ttaatccgtg gtatcagatt caatattgcc gcggaatatg aagcgattca
     7141 actttatgaa caaatcaaag aatcaacaga taacgagctt gtacacacag ttttaacaga
     7201 cattgttaat gaagaaagag aacatgccgg tgaattattt aaactgttga ttacactgga
     7261 ccccgaagaa gcaaaatatt acggcgaagg ggctcacgaa gttgaagaca tgatggacgg
     7321 aaaaaagaaa ccgcgttaat aaggagaaat atatgagtca ggttgaaaaa acaaaagaaa
     7381 atctacaagc atgcaactgc ttaaaatgcc cttcttacac aacatcttgc aaaattaaag
     7441 aaatgccgca caacatgatt gacatgttaa aaggcataga aaatgttgaa ggactggaaa
     7501 atttattctg tgcttataca aaaagccgct gtattgacga agataaaggc tgtttatgca
     7561 atgtatgcac agtacacgac aaatatgacc ttgaagacgg ccactattgt ataacagacg
     7621 gaggttatta aaaatatacg cannaaagga cgatatatcg tcctttttgc gggtttatat
     7681 tgcaagcccc tctaaaaacc tatataataa agaacatagg aggcatctga tggaattatt
     7741 tcatattttt tttcagttat ggcaaatatg gtgtatagca ggcgtcatat tttttataat
     7801 tgaaatgttt acccccgtta tgttcttttt aaaccttggt tttgcttgtt ttattgcagc
     7861 tattggtgca caaatgggca tagaaccgat atatcaagtt ttggtatttg gtttattcag
     7921 tgcaattttc ctcatatggc tgcgtccatt ccttttaaaa aagaaaaacg gcagcgataa
     7981 acccgaaacc gtcgaaatgt atataggcaa aacagcgaat gtgctggaaa ctgttactga
     8041 aaataacggt cgtattgcta tttttggcga agaatggcag gcaaaatccc ttaacggaga
     8101 aacagtagaa aaaggcgcgc aggcaaagat agtcaaaaat gacagtatca tcatgtatgt
     8161 tgtgcctata gaataggatt ttatgattgc atctttaatt gtctcactca cagcactttt
     8221 agtatttatt gccattggct acaaatgctt aattatcgta gacaaaaatg aacaggctgt
     8281 gnngcggctt gctaaattcg acagggtcat aggcgaaggt gtgcatctta ttataccttt
     8341 tattgaaaaa ctacacggaa ttgaagaccc ttacaaccat aaaaagtttt taaataacgg
     8401 aaaaatcagc cttgagcctg atgtaataag ttttcccaaa gatgacagag aattcttcgg
     8461 caaagacaag gctagaatga aactcaaagc tgatattgtt tacaaaatta cagaccctta
     8521 taaagcagtt tatgaagcag catacctttt tgatgctctt aaccagttgt ttgcaggaat
     8581 tttgcaaaaa cgactcattg acgctgatga aggcactaat tcagcagaat gtctcagaga
     8641 cctaacccgc agtatcattg atattgcaaa cgaatatgca caaaactggg gaataaaaat
     8701 tttggagttt aatttgaaac aaatcacaga tggaaacgga ataagacaca actattagaa
     8761 tacaaaaaag gagaaaaaga tgggcttttt attattggta ttattgattc ttgtaatcgc
     8821 atacttctca gcgggtatca aaattatcca gcaggaagag gcaatgatta tagaaaaact
     8881 gggggctttt gaaaaagtac tctac
//
LOCUS       DABS01000120            4984 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_24358, whole genome shotgun sequence.
ACCESSION   DABS01000120 DABS01000000
VERSION     DABS01000120.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4984)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4984)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4984
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            14..889
                     /locus_tag="CPT85_04815"
     CDS             14..889
                     /locus_tag="CPT85_04815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004362638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23529.1"
                     /translation="MIIPFFEYPRKIQWKTSQRGPDGRTYSFYTEKTAIDLRESVMDI
                     PRQNVITKDNVSISINALIYFQIMDAKSAVYRIQNLPEAIEKLTLTTMRNVIGDMVLD
                     ETLSSRDTINAKLRETLDEASNKWGVKVNRIELQEITPPADVQASMEKQVKAEREKRA
                     AIYEAEGLKQAAILKAEGEKTAAINKAEGQKQSAILEAEGEKEAARLVAEGQAAARVK
                     QAEAEATAINKTIEAIQDHGQPDKYLIAVRYLDTLKQMVEGENNKVVYMPYEATGILS
                     SVDGIKQMLDGTKVQ"
     gene            complement(942..2168)
                     /locus_tag="CPT85_04820"
     CDS             complement(942..2168)
                     /locus_tag="CPT85_04820"
                     /inference="COORDINATES: protein motif:HMM:PF01734.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23526.1"
                     /translation="MRLKEFNLSEIGSKEYFCIFGGGAIRGLAYLGAMQAMQELGVTI
                     KAFAGSSVGAVFAAFASLDYTCEEFRELFNEVNFDLFRDVRLDLTKKFAISKGEHFLN
                     WIRTGIEKKYYGDKYQKDKNPPVTFKDIKKDFFVITTNINGCNPHIFSKYTTPDFEVA
                     QAVRISTSLPGLLEPFEYDQNVLIDGDMMXWPMWRVNEILCPRDSRVIEFRLEGAKCW
                     PNVKNSVEYLNAVFATLSNFATDYIMQTYQPKDKFDYVKIDTDHILPVQFTLPQSERE
                     KLIVLGYDTTMEYFKKTLLQKKKSLLPQYTVMLDHLIKIKNAVKNNKICDAKSYICDM
                     FIYLCDAKRYIDIAIYDNAVRFKDYFFSHLQTSFFLKNTELKDKRQVEFYLNNLYDEV
                     LERCMELESYIKEFSM"
     assembly_gap    1600..1601
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2243..2782)
                     /locus_tag="CPT85_04825"
     CDS             complement(2243..2782)
                     /locus_tag="CPT85_04825"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23527.1"
                     /translation="MLQDLFKKNYNKAQIAELLGIKEHTVKRMKYNLGVFEVVKKDKK
                     VEMIKQMLSSGMYPKEIAQKLDMAVCTIYMYMKEYKLKNLISEYQKKTILERSKQGLS
                     LSAIAKELRIDRASIARFVDKHELKQEIMQLRNEYNKSIASRVKDSSLKTVAGEMNLS
                     HCQIKYRLKKAQDSSNLPQ"
     gene            complement(2719..3189)
                     /locus_tag="CPT85_04830"
                     /pseudo
     CDS             complement(2719..3189)
                     /locus_tag="CPT85_04830"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2793..2800
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    3113..3150
                     /estimated_length=38
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3338..4543)
                     /locus_tag="CPT85_04835"
     CDS             complement(3338..4543)
                     /locus_tag="CPT85_04835"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23528.1"
                     /translation="MRSIVKFSTKLSLAAFTVILGMSSVMANTLSEVEISAQDTGYGI
                     VLKTDEAAQMKKIISSDNKMTIELKDVEVSPDLNTVYNNAENIDNVTISPASKGDIKI
                     VFKGEGISNSRVSFESAKNIIPALNQNKSSQSIQLNGPVSSYTPVYNPEAFAQDSEDS
                     QTSNPQLNEVLTKMHVTRSMLVTAKKYAKKAIHKVESGDINFATVFGVILVIAAFMLK
                     PRRKSAPEQRPQSLTGILSNKSPQMQREIGLNREMTSNMNLGAGRAASLNSNALKTGY
                     GMRAYQQSQKNPYMSNTTSNGVSGIARRKPLQSAAPVKRQTTSNRPVSLNMNVPIKSN
                     RPAMTSPVASKTIPAAKSKAAMEPSDLDSMKFLESITKIYEKNGRTDLAKGLKDNLRK
                     AQMSGHAAM"
     assembly_gap    4776..4839
                     /estimated_length=64
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1489 a          885 c          848 g         1650 t
ORIGIN      
        1 cgcaggattt cacattatta ttccattttt tgaatacccc agaaaaattc aatggaaaac
       61 ttctcaaaga ggacctgatg gcagaacata ttctttttat acagaaaaaa cagccattga
      121 ccttcgtgaa tctgtcatgg atatccctcg tcaaaatgta attacaaaag acaacgtgtc
      181 tatttctata aatgcattga tttattttca aattatggac gcaaaaagtg cggtttatcg
      241 tatccaaaac cttcccgagg ctattgaaaa actgacactc acaactatga gaaacgttat
      301 cggtgatatg gtgctggacg aaacgctgtc gtcacgtgac acaatcaacg caaaattgag
      361 agaaactctc gatgaagctt caaataaatg gggtgtaaaa gttaaccgta ttgagcttca
      421 ggaaatcact cctcctgcag atgttcaggc atctatggaa aaacaggtta aagcagaaag
      481 agaaaaacgt gctgctatat acgaagcaga aggtttaaaa caggcagcta ttcttaaagc
      541 agaaggtgaa aaaacagctg caataaataa agctgaaggc caaaaacaat cggccatcct
      601 tgaagcagaa ggtgaaaaag aagcagcaag actggttgca gaaggtcagg cagccgcacg
      661 tgtaaaacag gcagaagctg aagcaacagc aattaacaaa acaatagaag ctattcaaga
      721 ccacgggcag ccggataaat acctcattgc agtaagatat cttgatacac ttaaacaaat
      781 ggttgaaggt gaaaataaca aagttgttta catgccctat gaggcaacag gtatcttaag
      841 ctctgttgat ggtataaaac agatgctaga tggtactaaa gtgcagtaaa tatatcaaat
      901 acaataaaaa gccgctttaa aataaagcgg cttttttgtt tttacatact gaattctttt
      961 atataagact caagctccat gcagcgttcg agaacttcgt cataaaggtt attaagataa
     1021 aattcaacct gccttttgtc tttaagctct gtatttttta gaaaaaagct tgtctgaagg
     1081 tgtgaaaaga aataatcctt aaacctcacc gcgttatcat atattgctat atcaatatat
     1141 cttttggcat cacaaagata aataaacatg tcgcaaatat atgatttggc atcacaaatt
     1201 ttattgtttt ttactgcgtt tttgatttta atcaaatgat caagcataac tgtgtattga
     1261 ggcagcagag atttcttttt ttgcagcaga gtctttttaa aatactccat tgttgtatca
     1321 tatccgagca caatcagttt ttctcgttct gattgcggaa gagtaaattg cacgggcaga
     1381 atatggtctg tatctatttt tacataatca aacttatctt tgggttgata tgtttgcatt
     1441 atgtaatctg tagcaaagtt tgataacgtg gcaaataccg catttagata ttcaacagaa
     1501 ttttttacgt tgggccagca ctttgcacct tccaatctga attcaataac acgcgaatct
     1561 ctggggcaaa gaatttcatt aacacgccac ataggccagn ncatcatatc accgtctatc
     1621 aaaacatttt ggtcatattc aaagggttct aaaaggccgg gcaaagaagt tgatattcta
     1681 actgcctgtg ccacttcaaa atcgggtgtt gtatatttag agaaaatatg cggattgcag
     1741 ccgtttatat ttgttgttat tacaaaaaaa tcctttttta tatccttaaa agttacaggg
     1801 ggatttttgt ctttttggta tttgtcaccg taatattttt tttcgatacc tgttctaatc
     1861 cagttgagaa aatgttcgcc tttgcttatt gcaaattttt tggtcaaatc aagcctaacg
     1921 tctctaaaaa ggtcaaaatt cacctcatta aaaagctcgc gaaactcctc acatgtataa
     1981 tcaagagaag caaatgccgc aaaaacagcg cctacagaag agccggcaaa agctttaatc
     2041 gtaacaccaa gctcttgcat tgcctgcatt gcaccaagat aagcaagccc gcgaattgcg
     2101 ccgccgccaa aaatgcaaaa atattcttta gaaccgattt cgctcaagtt aaactccttt
     2161 aaacgcacct gtaaaaattt aggcctagtc ttattaaatc ataaaacaag aagtaaaaat
     2221 acaaaatcac ctaaatatgg gtctattggg ggagattgga agaatcctgt gcctttttca
     2281 gcctgtattt aatttgacaa tgagaaagat tcatttcacc cgcaactgtt ttcaatgaag
     2341 agtcttttac cctactggca atagatttat tatattcgtt tcgcagctgc ataatctctt
     2401 gtttgagttc gtgtttgtct acaaaccttg caatgcttgc cctgtcaatg cgcagttctt
     2461 ttgcaatagc agacagactg aggccttgct ttgagcgttc aagaatagtt ttcttttgat
     2521 actctgatat aagattttta agtttatatt ccttcatgta catataaatt gtacaaacag
     2581 ccatatcaag tttttgggca atttctttag ggtacattcc ggaagaaagc atttgtttaa
     2641 tcatttcaac ttttttatct ttttttacaa cctcaaaaac accaagatta tatttcattc
     2701 tttttactgt atgctctttt ataccgagca attctgcaat ttgtgcttta ttataatttt
     2761 ttttaaacag gtcctgcagc attttgtggc ggnnnnnnnn tttgttcttt ctgcaatcca
     2821 ggagattatt ttcttttgat caactccggt tgcctgtgcc atttcaaaaa gatctgcatt
     2881 tttagccagc atttttggca aagtagagtt aagaatatgc atactcttct ggttatttaa
     2941 cctattttgt ttattcacgg tcattatatt aaattcttcc atagctttgt ataaggcatt
     3001 tagccttata tttaaaaatt cagctatgct tttgacgctc ataccctgtt ttatacaggt
     3061 ttctatctga gttttagtga tatcagatac attttttggt attgctgctt tannnnnnnn
     3121 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn cgatggggta ttaaaataac tgttaaaaaa
     3181 tatttgcata acgttcacct ggtagtataa aaaataaaca aaaatttttt tgctatttta
     3241 ttataaaaaa aagagacagt ttttgctgtc tcgtatattg ttgagtatcg tctatttatt
     3301 tctctctctt gtagttacac ttcttaaact gtttatctta catggctgcg tggcctgaca
     3361 tttgtgcttt tctcaggttg tctttcaagc cttttgcaag gtctgttctg ccattttttt
     3421 catatatttt tgtaattgat tccaaaaatt tcatactatc caaatcagaa ggttccattg
     3481 ccgcttttga ctttgcagca ggaattgttt tggaagcaac agggcttgtc atagccggtc
     3541 tgtttgattt tataggaaca ttcatattta atgataccgg tctgtttgat gtagtttgtc
     3601 tttttacagg agctgcgctt tgcaagggtt ttcttcttgc aataccggaa acaccatttg
     3661 atgttgtgtt agacatataa ggattttttt ggctttgttg gtaagctctc attccatagc
     3721 ctgttttcaa tgcattggaa tttaaagaag ctgctctgcc tgcaccaaga ttcatgttag
     3781 atgtcatttc gcggttcaag ccaatttcac gctgcatttg agggcttttg ttagaaagaa
     3841 tacctgtaag agattgaggt ctttgctcag gtgcagattt tcttctcggt ttaagcataa
     3901 atgctgcaat aacaaggatt actccaaaaa cagttgcaaa attgatatcg cctgactcaa
     3961 ctttatgtat tgcctttttg gcatattttt ttgctgtcac aagcatactt cttgtaacat
     4021 gcatttttgt taatacttca ttcaattgcg ggttagatgt ttgcgaatct tcagaatctt
     4081 gtgcaaaagc ttccggatta taaacaggtg tatagctaga cacagggccg tttaactgaa
     4141 tggattggct gcttttattt tggttgagtg caggtataat attttttgca gattcgaaag
     4201 aaactctgct gtttgaaata ccttcacctt tgaaaactat tttgatatcg ccttttgatg
     4261 ccggtgaaat agtaacattg tcgatgtttt cggcgttatt gtacacagtg ttgaggtcgg
     4321 gagaaacttc tacatctttt agctcaattg tcatcttatt atcagatgaa atgatttttt
     4381 tcatttgtgc tgcttcatca gtttttaaaa caataccgta gcctgtgtct tgagcgctaa
     4441 tttcaacctc agacaaagta ttggccataa cagatgacat acccaaaata acggtaaatg
     4501 ccgccaaaga taattttgta ctaaacttta cgatacttct cattactact ctatactccc
     4561 caagagttac tcaactttta tagttaaata atactttttg cgcatgacaa atacatcaat
     4621 ctcggggtta aaggttaaaa aaaatatatt aaccatatgg tcaatatatt ttttgaaata
     4681 ctataaaatt tctttaatta aagtataatc tagtatcgtc actgccgact cgacttctcg
     4741 agccatcact gactcacctt ttcaattgtc actcannnnn nnnnnnnnnn nnnnnnnnnn
     4801 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnt atttattccg taaagacaaa
     4861 ttgccatcat tagaattcca gccacatctc caaatcgaga gcttggaagt tcatcaccat
     4921 ttttatcatg aatagccgtc aagtatccct tgtttgtata ttgagcatag aaaacatcat
     4981 ttgt
//
LOCUS       DABS01000121            9046 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_16289, whole genome shotgun sequence.
ACCESSION   DABS01000121 DABS01000000
VERSION     DABS01000121.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 9046)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 9046)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9046
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            1..672
                     /locus_tag="CPT85_04840"
     CDS             1..672
                     /locus_tag="CPT85_04840"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23506.1"
                     /translation="MVANKFNDEIIFRGDSYDYVTKPLDEKELNLRLKNLLKIKELKE
                     TINQVSTTDALTGLHNRRFLHERLEAEIARSKRYDTKLSCLLLDIDFFKVVNDMYGYD
                     WGDVLLKKIAEMLKGFIRKEDILTRYGDEEFIVLLPNTPEENAFIFAERFRREIEKME
                     FIPAGEEERHPITISGGIASYPFLQNVEEDGNTLIRYAEHALYNAKKRGKNKIVQFSQ
                     INIEY"
     gene            complement(713..1723)
                     /locus_tag="CPT85_04845"
     CDS             complement(713..1723)
                     /locus_tag="CPT85_04845"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23507.1"
                     /translation="MIKDIDFSKIKFIPASPEDLILALDRLTRFKYPEIKYYRVFSEL
                     LCKYFKEPRLSKNQIKDMDTAVLKRLVEIFWNESVSKYTPAVKSDKQLNELLLKELYD
                     TYNLSQEVKILTDINININGVLALISDKNNLPLNLKRLAVIEHDHQNLIEKRQKYGLR
                     FPVEKVVLCEGITEEILLPRFAKLSGFDFDKNGVKLISAGGKNQVAKLYCELKDELKI
                     PIFILLDADAVEISEKINCVLRDTDSMYLICHGEFEDIFSLNLIKRTINKRFKNICEC
                     CIADFKRNEPMTKTLSEFYRLHELGDFQKADFAKELAQNLKYETDLTDEIKQIVDRIK
                     IL"
     assembly_gap    1901..1902
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1961..3250
                     /locus_tag="CPT85_04850"
     CDS             1961..3250
                     /locus_tag="CPT85_04850"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23508.1"
                     /translation="MRKASPNFGSYQIRTSLSGRDEHQKFNEISAILDKRVKKELNEL
                     LKKGKLLSTNSNDRSTTLDNLYKIATTPRASGLDAKNIIEDVIKTINKPYIITQKFGD
                     IPAALQADIINEEKRQGKNITAHDLDVKSSTCPAASIEFDIAHRMPAEFARMAEGLTS
                     ENICVTKNINVDDLSQGLMNTIWMLNEFGTEHKMENWKTLKVNLKPDKNAIIRARIQN
                     KYKDKDERSVIDVLMQSTFMNIGAQNTYDSLIDRRIPKYNDDDSGLIDIEKNFAEELA
                     TGKGKVCVTYQKIDDNGKLIGYECEQNETLEHIENTIKGGDNVIIGYTYCDSDNNVIG
                     GHEITITGIEKDKKGNKYFVCNDTDDGVSEPITYPVAELLPKIHHAGIPKSVLIDNVE
                     FVEAWKELMQVYKDTKSQQEVQNALQNNRLNVITPAA"
     gene            3328..4272
                     /locus_tag="CPT85_04855"
                     /pseudo
     CDS             3328..4272
                     /locus_tag="CPT85_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014809530.1"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
     assembly_gap    3741..3769
                     /estimated_length=29
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4274..5299
                     /locus_tag="CPT85_04860"
     CDS             4274..5299
                     /locus_tag="CPT85_04860"
                     /inference="COORDINATES: protein motif:HMM:TIGR00374"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23509.1"
                     /translation="MKKVIKHKDKIIGLIISVIFIALIVWKLDFHQLIETFKIFNYKV
                     LLVFIPLYVLGLYVRGFRWKYLLCNDSNITVKEAFFSFTTGNTLNSYLPARAGDIWRA
                     YHVGNKLNESKMKLLGSIILERIIDGISVLLILFFAVLTYFKHQWVLNITYIAAALFL
                     GSLAVFFLVFKFNKISWFFDKLSNIPFLTQFEPFFTKIAGMLNKFMDGFQALNNPKCF
                     TLAFAASCIAWGIECILTYILITGFGHHFGFSIAFFVISFIALSTIIPSSSVFVGPYQ
                     YAYILALGIYHIEKANALGIAFIHQITIMLIITVISIIYFTLTDTKLEEIKAEIEENQ
                     DAINTQS"
     gene            5277..6472
                     /gene="hydF"
                     /locus_tag="CPT85_04865"
                     /pseudo
     CDS             5277..6472
                     /gene="hydF"
                     /locus_tag="CPT85_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018249420.1"
                     /note="frameshifted; too many ambiguous residues; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="[FeFe] hydrogenase H-cluster maturation GTPase
                     HydF"
     assembly_gap    5376..5392
                     /estimated_length=17
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    6207..6210
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    6463..6464
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6498..6830
                     /locus_tag="CPT85_04870"
     CDS             6498..6830
                     /locus_tag="CPT85_04870"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23510.1"
                     /translation="MTEARRWYDKDPVLKEALELLRLQTDETKAEAADYILTLQEQVA
                     ADVIEHLYETIAKYQGKGNRWYDNDPVMMKAIEMLRLAPPKVQRIAALKLLLALEQKS
                     SENLEDLR"
     gene            6844..7646
                     /locus_tag="CPT85_04875"
                     /pseudo
     CDS             6844..7646
                     /locus_tag="CPT85_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013682399.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
     assembly_gap    7467..7468
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7647..8894
                     /locus_tag="CPT85_04880"
     CDS             7647..8894
                     /locus_tag="CPT85_04880"
                     /inference="COORDINATES: protein motif:HMM:PF00155.19"
                     /note="produces methionine from
                     2-keto-4-methylthiobutyrate and glutamine in vitro;
                     mutations do not affect methionine salvage in vivo
                     however; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="DAB23511.1"
                     /translation="MKEHFNEYVKSIETYIMFRIKQEAARLAPELEAKGRAPIALAMG
                     APVAPPPQFVYDKLVEALKFPQIHTYSSPKGENFYLEAIAKRMKNRFNVELDPQTEIF
                     SLIGSKEGIANFIRALINPTNIEQDKDIILVPDPGYASYSQMIKTNGGISYPISLNKE
                     NNYMPDMNKIWENLIKDGLNPSKVKAMMINYPSNPLGATCTKDYLKHIVDFCKEKQIW
                     LMSDAAYCDIYFEEQAKPHSIFEIEGAKDVAVEFYSFSKPYSMTGFRLGWICGNKEAV
                     GTFGRLKSTIDTGLFKALQKCAAAVLNSKEGDEYIEQANKSFKKKQQIVINGFRELGW
                     KIEENDIPKATFYIWLPIPPRYKTSKEFTDDLLKTSGIVVVPGNGFGANGEGWFRLSA
                     VATDEQLMDVIERMKKDGFYFSK"
BASE COUNT         3239 a         1539 c         1674 g         2538 t
ORIGIN      
        1 attgtggcaa acaagtttaa tgacgaaatt atattcagag gcgactctta cgactatgta
       61 acaaaacctc ttgatgaaaa agaattgaat ttaagactca aaaatctttt aaaaattaaa
      121 gagctcaaag aaactattaa tcaggtttct accacagatg ctcttactgg tcttcataac
      181 agaagatttc tccatgaacg tcttgaggca gaaattgctc gttctaaaag atatgataca
      241 aaattaagct gcttattgtt agacattgac ttctttaaag ttgtaaacga tatgtacgga
      301 tatgactggg gcgatgtatt gctcaaaaaa attgcagaaa tgctaaaggg ttttataaga
      361 aaagaagaca tcttaacacg ctatggtgac gaggaattta ttgtacttct acccaataca
      421 ccggaagaaa atgcgtttat ttttgcagaa agattcagaa gagaaattga aaaaatggaa
      481 tttattcctg ccggagaaga agaaagacac cctattacta tttccggtgg tattgcttca
      541 tatccgttcc tgcaaaatgt tgaagaggat ggcaacactc ttatccgtta cgcagagcat
      601 gccttatata acgcaaaaaa acgcggcaaa aacaaaattg ttcagttctc acagataaat
      661 atagagtact aattcataaa aaaaggtctc catcaggagg cctttttata ttttatagta
      721 tcttaattct atctacgatt tgttttattt catcagttaa atcagtttca tactttaggt
      781 tttgcgccag ctcctttgca aaatcagctt tttgaaaatc accaagctca tgcaagcggt
      841 aaaattcaga cagagttttt gtcattggtt cattgcgttt aaaatcagca atgcagcatt
      901 cacaaatatt tttaaaacgt ttatttattg tccttttaat aaggtttaaa gaaaaaatat
      961 cctcaaactc accgtgacag ataagataca ttgagtcagt atctcttaaa acacaattga
     1021 ttttttctga aatttcaact gcatctgcgt caagcagaat aaaaattgga attttaagct
     1081 catctttaag ttcacaatac agctttgcaa cctgattttt acctccggca cttatcagtt
     1141 ttactccgtt tttatcaaaa tcaaagccgg aaagtttagc aaaccttggc aaaagaattt
     1201 cctctgtaat gccctcgcac aaaacaactt tttcaacagg aaaccgcaaa ccatacttct
     1261 gacgtttttc aatcaggttt tgatggtcat gttcaattac agccaatctt tttaaattca
     1321 gaggtaaatt gtttttgtca gaaatcaaag ccaatacacc gtttatattg atatttatat
     1381 cagtcaggat ttttacctct tgcgaaagat tataagtgtc ataaagctcc tttaaaagca
     1441 gctcattcaa ttgtttatca gattttacag ccggagtgta tttggatact gactcattcc
     1501 aaaaaatttc aacaagtcgt tttaatacag cagtatccat atcttttatt tgatttttag
     1561 aaagacgagg ctctttaaaa tatttgcaaa gaagctctga aaaaactcta taatacttaa
     1621 tttcaggata cttaaaacgc gttagcctgt ctaaagcaag tattaaatct tcaggcgaag
     1681 cgggtataaa tttaatttta ctaaaatcga tatcttttat caaaactcag actatataac
     1741 aaattcttaa tattacttat taattataat gcaaaaacgc aattttttat attttcagtt
     1801 tttaataaag tataataggg cggaaagttc aaagtgaata gtatatcatt atttaacatt
     1861 gaaaataata aatacaatct acatttgcag cacccgataa nnaaaaagtg ctgcgccaag
     1921 ctttgtaaca aatcctggtt ttacaaacta tgattctttt atgcgtaaag cctcgcccaa
     1981 ttttggttct taccagataa gaacatcgct ttctggaaga gatgagcatc aaaaatttaa
     2041 tgaaatttcc gctattttag ataaaagagt aaaaaaagag ctaaatgaac tgttgaaaaa
     2101 aggcaaactt ttaagtacaa attccaatga caggtcaaca actctggata atttatacaa
     2161 aattgccact acaccaaggg cttcgggact ggatgcaaaa aatattattg aagatgtaat
     2221 aaaaacgata aataaaccat atattattac gcaaaagttt ggtgatattc ctgctgctct
     2281 tcaggctgat attattaatg aagaaaaacg ccagggcaaa aatattacag cacatgacct
     2341 tgatgtaaaa tccagcacat gcccagctgc aagtattgaa tttgatattg cacacagaat
     2401 gccggcagaa tttgcaagaa tggcagaggg acttacgtct gaaaacattt gtgttacaaa
     2461 aaacattaat gtggacgacc tgtcacaagg cttaatgaat actatatgga tgcttaacga
     2521 atttggaaca gagcacaaaa tggaaaactg gaaaactcta aaagttaatc tgaagccgga
     2581 taaaaatgca ataataagag ccagaataca aaataaatat aaagataaag acgaacgctc
     2641 ggtaatagat gttctaatgc aatcaacatt tatgaatata ggcgcacaaa acacctatga
     2701 ttcattaata gacagaagaa taccaaaata caatgatgac gatagcggac ttattgatat
     2761 agaaaagaac tttgcagaag aattggctac gggcaaaggc aaagtttgcg taacatatca
     2821 aaaaattgat gacaatggca aactgatagg atatgaatgt gagcaaaatg aaactcttga
     2881 acacatagaa aatactatca aaggcggaga taatgtaatt atcggttaca cttactgtga
     2941 tagcgacaat aatgtaattg gcggccatga aattaccatt acaggaatag aaaaagataa
     3001 aaaaggcaac aaatactttg tttgcaacga cacagatgac ggagtatctg aaccaataac
     3061 ataccctgtt gcagaattgt tacccaaaat tcaccatgcc ggcataccaa aatcagtatt
     3121 aattgacaat gttgagtttg tggaagcctg gaaagagctg atgcaggtat ataaagatac
     3181 aaaatcgcag caagaagtac aaaatgcctt gcaaaataac agattaaatg taattacacc
     3241 ggctgcataa gtcttggaca acagtttttt attcctctat aataaatgag tcatataacg
     3301 gattaagaat tggaatgagg agataagatg aaagctgtcg tatttgataa tggtttaaaa
     3361 ttagataaca actatcccat gcctgtgccg caaaaaggtg aagcacttat caaggtaaac
     3421 acaataggga tatgtaatac agactatgaa ataactcttg gatatatggg ttataaaggc
     3481 attctgggtc atgaatttac aggtgttgtt gaaaaagcag aaaacaaaga cctcatcggt
     3541 aaaagagtag tcggagaaat aaattgcggc tgcggacaat gcgactggtg cgcacagggg
     3601 ttagaaagac actgcttcaa ccgctcaaca ctgggtatct ggcaaagaga aggctgtttt
     3661 gcagaatatg tctgcctgcc tgaaaagaat ttgcttgtaa ttcctgataa tgttacggat
     3721 gaagaggctg tttttgttga nnnnnnnnnn nnnnnnnnnn nnnnnnnnnt accgccttat
     3781 aaaagagtaa ttgtgctcgg agacggcaaa ctggggttaa ttatagcact ggctcttaac
     3841 gctgcaggat tagatattac tcttgtgggt aaacatgaag aaaaactcaa cattgcaaaa
     3901 gcacagggcg taaaaacaga acttttgaac aatttaaaaa tagaaaaagc ttatgatttt
     3961 gtggttgaag caacaggttc gataacaggt tttgaaacat cactggctct gacaaaacca
     4021 agaggaacac ttattttaaa aagtactatt gctgcgtcaa aagaattcaa ccttgcacct
     4081 attgttattg atgaaataac agtacttgga tctcgctgcg gtcagtttgc tcctgctttg
     4141 agaatgctgg aacaaaaaag aatagatgtt aagcctctaa tctccgatat ctacgcaatt
     4201 gatgattcca tagaggcgtt tgaaagaaac aaagaaaaat cttcagtaaa ggtgcttgta
     4261 aaggttaagt aaattgaaaa aggtaattaa acacaaggat aaaataatag ggcttattat
     4321 cagcgtgata tttatagctc tgattgtatg gaaacttgac tttcatcagt tgattgaaac
     4381 atttaaaata ttcaactaca aggtcttgct ggtgtttatt ccactttatg tgctggggct
     4441 ttatgtaaga ggttttagat ggaagtatct gctttgtaat gacagtaaca tcacagtaaa
     4501 agaagcattt ttttctttta cgacaggcaa cactcttaac agctatcttc ccgcacgtgc
     4561 aggcgatata tggagagcat accacgtagg aaacaaactc aatgaaagca agatgaaact
     4621 cctcggttca atcattctgg agagaatcat cgacgggatt tcagtgcttt taatactgtt
     4681 ttttgctgtt ttaacgtact tcaaacatca atgggtgctg aatattacct atattgcagc
     4741 agcactgttt cttggcagtc tggcagtgtt ttttcttgta ttcaaattca acaaaatttc
     4801 atggtttttt gataaactct ctaatatacc ttttttaacg caatttgagc cgttctttac
     4861 aaaaattgca gggatgctaa ataagtttat ggacgggttt caggctctta acaaccctaa
     4921 atgttttaca ctcgcttttg cggccagctg tattgcatgg ggtattgaat gcattctaac
     4981 atacattttg ataaccggat tcggacatca ttttggtttt tcaattgcct tttttgtaat
     5041 cagttttatt gcattgtcta caattatacc gtcttcatcg gtttttgtcg gaccttatca
     5101 atatgcatat attctggctc ttggcatata ccatatcgaa aaagcaaatg ctctgggtat
     5161 tgcttttatc caccaaatca caatcatgct gataattaca gtaatttcga taatatattt
     5221 taccctgaca gatacaaagc tggaagaaat caaagcagaa atagaggaaa atcaagatgc
     5281 tatcaacacc caaagctaac aggcttcaca tcggtatatt tggaaaaaga aatgccggca
     5341 aatcctcatt gcttaacgct cttgtcaatc aggagnnnnn nnnnnnnnnn nncagaccct
     5401 gttgaaaaaa caatggaatt tctaccgctc ggccctgttg tttttattga tacagcagga
     5461 atagatgata ttggcgattt aggtgaacaa agaattgaaa aaacaaaaaa aatctttgac
     5521 agaacagata ttgcaataat tgtctgcgat tatgaaggct gggacaatta cgaaaaacag
     5581 ctgtatgaag agtttcagtc aagaaatatt cctgttctgg ctgttgtcaa caaacaggat
     5641 ataaccccca taaacgctga taaactggat gaaattacaa aatatattaa attgccgcta
     5701 ctcaccagtc ttaaaaacaa cagagaagtt attttcagat tgaaagaaca gctcatcaat
     5761 gtttgtcctg atgactttat aacaccgcct tccattctgg gtgacatcgt acaggcaaaa
     5821 gacactgttg tacttgtaat accagttgat aaagaagcac caaaaggcag aattatactg
     5881 ccgcaggttc aggtactaag agacctgctt gataacaggt gcaaagcctt tgttactcaa
     5941 gaaacagagc tgaaagaggc gcttgatgaa ttacaaaact ccccaaaact ggtgattaca
     6001 gactcacaag cttttaaaga agtggcacaa gatgttgcag aagaaatccc cttaacctct
     6061 ttttccatag tatttgcccg aatgaaaggc gacctgaaag agttttataa aggtgcaaaa
     6121 gcaattgata ctctcaatga taatgacagg gtgcttattt gcgaaagttg ctctcatcac
     6181 cagatagaag acgatattgc aagagtnnnn aaagaataaa accggaaaaa atatagaatt
     6241 tgtctatcac agcgggcatg acttccctga tgagctggaa caatacaaac ttcttatcca
     6301 ttgcggtgct tgtatgacca atagaaaaga agtcttgagc agaattatga aatgtaaaaa
     6361 agcaaattta cctataacaa actatggtat tgcaattgcc cactgcacag gcatactaaa
     6421 aagggctgtc aaaccgttta acatattaga cacggtggaa tannatgaat aaacagtaaa
     6481 aaaacgagga tataaaaatg acagaagcaa gacgctggta tgataaagac cctgtattaa
     6541 aagaagcact tgagcttttg cgtcttcaaa cagacgaaac taaagcagaa gcagccgatt
     6601 atatcttgac actgcaagaa caggttgctg ctgatgtaat tgagcactta tatgaaacaa
     6661 ttgccaaata tcaaggcaaa ggcaaccgct ggtacgataa tgaccctgtt atgatgaaag
     6721 ccattgagat gctgcgcctt gcaccgccca aagtacaaag aattgccgca ttaaaactgc
     6781 ttctggcatt ggaacaaaaa tcctcggaaa atttagaaga cttgagataa aaacaggaaa
     6841 aaaatgaaaa gccacataaa agatgtcccc ctacgggatg ttcaaaacct cattgataac
     6901 aggggtatag atatacaaaa agttggaata aaaaatgttg atgttccgtt aattatccaa
     6961 agaaaaggac aggaaaatca ggtagtttat gcaactgccc aaatttgtgc ttcattggat
     7021 tcaaacttta aaggcacgca catgtctcgt tttatggaga tattgaacga atggagagaa
     7081 aaagagcttc tcggagtaga cataaaaggc tgccttgaag caattcaaca aaagctcggt
     7141 gcgcatagtg cacaggttaa attttcattc aagtatttta tagaaaaaga agcacctgtt
     7201 tctaagcaaa aatcattaat ggcatacgac tgcgtttttg aaggcaagct tgataacgat
     7261 gaatacaagt tctttctcgg aacaaaagtg cctgttacaa cactgtgtcc ttgttctaaa
     7321 gaaatatctg attattcggc tcataatcag cgtgcgctaa taaaaatatt aataagctac
     7381 gatgaatcag aacatatctg gctggaagat ttgatatcag aaattgaaga aaaggcatcc
     7441 tgcgaagtgt atcctctgtt gaaaagnnaa aatatgtgac agaacacgca tatgacaacc
     7501 ccaaatttgt ggaagacgtt ttaagagacg ttgttttaat gtttagagaa gacaaaagaa
     7561 tcaactactt tgaggcagaa gtagaatcac tggaaagcat acataaccac agtgcctggg
     7621 catatcaatt ggagtctaaa aaataaatga aagaacattt taatgaatat gtgaaatcca
     7681 ttgagacata tattatgttc aggattaaac aggaagcagc aagactggca ccggagctgg
     7741 aagcaaaagg aagagcacct attgcacttg caatgggcgc acctgtggca cctcccccac
     7801 aatttgttta cgacaagctc gtagaagcac ttaaatttcc gcagatacat acatattcct
     7861 ctccaaaagg cgaaaatttt taccttgaag caattgccaa aaggatgaaa aacagattca
     7921 atgtagagct tgatccgcaa acagaaattt tctctcttat aggttcaaaa gaaggtattg
     7981 caaactttat aagagcttta ataaatccga ccaatattga acaagacaaa gatattatac
     8041 tggttcctga cccgggatat gcgtcttatt ctcaaatgat aaagacaaat ggaggtataa
     8101 gttatcctat ttctttaaat aaagaaaaca actacatgcc tgatatgaac aaaatctggg
     8161 aaaacttgat aaaagacggc ctaaacccgt ctaaagttaa agcaatgatg attaattatc
     8221 cgtcaaatcc gcttggtgca acttgtacaa aagattattt aaaacatata gttgattttt
     8281 gcaaagaaaa acagatctgg cttatgagcg atgcagccta ctgtgatatc tattttgaag
     8341 aacaagcaaa gccgcacagc atttttgaaa tagaaggtgc aaaagatgtt gcagtagagt
     8401 tttacagttt ttcaaaacca tattcaatga caggttttag gctcggatgg atttgcggaa
     8461 ataaagaagc tgtaggcacc ttcggccgat taaagtcaac tattgacaca ggtcttttta
     8521 aggcattgca aaaatgtgca gcagctgttc tcaactccaa agaaggcgat gaatacattg
     8581 aacaagcaaa caaaagcttt aagaaaaaac agcagattgt tatcaacgga ttcagagaac
     8641 tcggctggaa aattgaagag aatgacatac caaaagctac tttctacata tggctgccta
     8701 ttccgccaag atataaaaca tcaaaagaat ttacagatga tctgttaaaa acatcaggaa
     8761 tagttgttgt tccgggcaac ggattcggtg ctaacggcga aggctggttc cgtttatctg
     8821 ccgtagcaac agatgaacag ttgatggatg ttattgaaag aatgaaaaaa gacggattct
     8881 atttttctaa ataaactccg tcaaacgctt ttaaattgca atttagacga ttctacaaaa
     8941 tcagccagtg tgcttaaact attgcgaagc aaataaccgt ttttgatttg agaagctctg
     9001 attcttaaat caaacagtgt aaaatttgat tcaacaacaa ttttta
//
LOCUS       DABS01000122           42061 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_8175, whole genome shotgun sequence.
ACCESSION   DABS01000122 DABS01000000
VERSION     DABS01000122.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 42061)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 42061)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42061
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            1..1131
                     /locus_tag="CPT85_04885"
     CDS             1..1131
                     /locus_tag="CPT85_04885"
                     /inference="COORDINATES: protein motif:HMM:PRK00064.1-5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="DAB23431.1"
                     /translation="MFIRSVELKNYRNYKDLSLEFSKDKILLIGKNAQGKTNLLEAVY
                     YMSCLNSARAKTDSELILWGEPFARLKAVVEKNDMEKELDVLINPPKRKEMKVNGVKK
                     SKSADFCTNLSVVSFSVNDLLLLRGVPDDRRSWLDMAISQIYPAYPDRVAKYNKIRIQ
                     KNNHLKDIKGNINADTSLLEVFNSQLCISGSNIIFLRLKFLKELQKIAMEKHIQIAQH
                     EILTTVYNSTAAGDIDFSFDKELTVEEIAAQFEQKLNERKLEEIIRAQALVGPHRDDV
                     SFFINGIEAKKFASQGQQRTVVLSLKLAELELIKEKIDDTPVLLLDDVLAELDNIRQN
                     YLLNAIGANTQTIITSVDTLHFDEEYLKDVEIFKISEGKVAI"
     gene            1505..5059
                     /gene="mfd"
                     /locus_tag="CPT85_04890"
     CDS             1505..5059
                     /gene="mfd"
                     /locus_tag="CPT85_04890"
                     /inference="COORDINATES: protein motif:HMM:TIGR00580"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="DAB23432.1"
                     /translation="MHEPLSGGFIFSLMCYYQCMTDILTHFNNKRILNLEKITAFLKK
                     NNSFMVSGLTSFLRLFLLADIYRQKRTVFVTNTEQNALKYKHDLEKFFNIESQIFPYQ
                     DISIYDGVAPNLYKYAQQVEILKNLENIPLLIVPVKAMLEKFPETSFYEKNAINIKID
                     DEIDTSQIAQKLVSLGYKRVTMVSDIGEFSLRGDIIDVFSLNKYAARIELWGDTVTDI
                     RYFDNKTQRSVKKIKETTILPVYKFLLDEDNAETFKNELTQAAVTMDSGENVDIVREN
                     LQETLEKIDTEKYFDGIDYFQSYLNKKMKSLPQLLLDSQNPPALVLDESSEIFSKFAQ
                     IDENYEKQIEENTQKALALPLKNKAHLDFADFQTAVAGLQKISFDNFLDTVSDYTIEF
                     ESSLIPSFSSKMEEILAFVEDRMQKGYKVVIATDYKNRIEDVFCDFELAVSDDFSVQN
                     EVFLADNLALGGSAVEELKLVVLTDKELFNKKSKDITAKKQNYHKESADYIESVNDIK
                     EGEYVVHQVHGVGLYKGLSKQEIDGQLKDYLTIEYAQGDKLHMPAEQINLLVRYRGSG
                     AVAPRLSRMGGNDWNITKTRAKKAIEDIAKDLLRLYAKREVAQGIAFEPDTVWQCEME
                     EAFEYTETPDQMRAIQETKADMELEKPMDRLICADVGFGKTEIAIRAIFKAVMSGKQA
                     AVIVPTTILAMQHWQTISERFKPFPVRVELLSRFRTAKEQKETIKKLIKGEVDVVIGT
                     HRLLQDDIVFKDLGLLVIDEEHRFGVKHKEKLKMLRKNIDILSMSATPIPRTLYMSLS
                     GIKNMSVINTAPMNRLPIKTYVGQYNETYVKNAINHELDRDGQVFFLYNRVETIYEFA
                     AELQKVVPNARIAVAHGQMDAKTLENIMLEYAEHKYDILLCTTIIESGLDIPNANTMI
                     IYDAYRFGLAQLYQLRGRVGRSDRQAYCYCFYKSHKKLTPEALQRLNAIKEFSTLGGG
                     YQIALRDIEIRGVGNILGTKQHGHMTSVGFDTYCQLLEETINELQENGEKPQPPAIVD
                     INVTAFIPDEWVGSKEQKMIEYKRLADVKTLEELDLIHQEWKDRFSKIPEPVENLIKI
                     IHLRLLATQAKITLIRETSDNIRIYMPYTKAEWTIIASRLDRNITKYIKYTIAPKSCR
                     EGNSILLFNNGILSFKEVFNILADLFYYINKITYEYNN"
     gene            5062..6210
                     /locus_tag="CPT85_04895"
     CDS             5062..6210
                     /locus_tag="CPT85_04895"
                     /inference="COORDINATES: protein
                     motif:HMM:PF13616.4,HMM:PF13624.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23433.1"
                     /translation="MRSIKMKKLKLFATVLAASATLMICGCTNHNAIVTVNGDAITKA
                     QYEKAFDAVADNSMFAQMGIDLKKDPNSFLHLMIKDRVVNELVVKKLLDQEIKRRHIK
                     VSKADMDAQLKSIIDKVGSKEKFNELLKQNGVSSAQFKKDLTDEVKIQKLVDTLAVVT
                     VSDKDAMKFYKDNQDKFKNPDKVRASHILVSANPEELKAKIASSAQGKSMTEDQLKAE
                     VDKQMAAQKAKAEKLLAEVKKDTKSFAKVAKENSDDTQSAKQGGDLGFFGKEEMVEPF
                     SKAAFSMKPNTLSGVVQTPYGYHIILVTDRVKAGIEPFDNVKAEIKDFLTNQEKVKTL
                     QQFVDTLKNNAKIEYNDPSFNPAEIQKALKEQSKNNPALMEGPKSAKE"
     gene            6232..6525
                     /locus_tag="CPT85_04900"
                     /pseudo
     CDS             6232..6525
                     /locus_tag="CPT85_04900"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    6499..6521
                     /estimated_length=23
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6522..7007
                     /locus_tag="CPT85_04905"
                     /pseudo
     CDS             6522..7007
                     /locus_tag="CPT85_04905"
                     /inference="COORDINATES: protein motif:HMM:PF00294.22"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6961..7218
                     /locus_tag="CPT85_04910"
                     /pseudo
     CDS             6961..7218
                     /locus_tag="CPT85_04910"
                     /inference="COORDINATES: protein motif:HMM:PF00294.22"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    6964..6976
                     /estimated_length=13
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7218..7700
                     /gene="rfaE2"
                     /locus_tag="CPT85_04915"
     CDS             7218..7700
                     /gene="rfaE2"
                     /locus_tag="CPT85_04915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016481582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="DAB23434.1"
                     /translation="MGQIVKREDLPQLLNDLKTQGKTVVTTNGCFDILHVGHVRYLQK
                     TKTFADKMIVCLNSDVSVKKIKGPDRPINNENDRAEILCALACVDYVVLFDESSPEGL
                     LGEIKPDVHTKGADYTLETLPEAKIILANGGRVEFISFVEGKSTTNVIKKIGAQGICK
                     "
     gene            complement(7721..8731)
                     /locus_tag="CPT85_04920"
     CDS             complement(7721..8731)
                     /locus_tag="CPT85_04920"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23435.1"
                     /translation="MSAQGSDFKFSRNIQKFEWENRRPRLKKDFDYSTLNIPRINLRL
                     SSIGQINEIKKFCAKLGFNPIYSIEYGEILNTADLSKSSFNEIITKVKKFCFNYGIKL
                     QLSTPRILIERDFDRVYEYVKNLCLTEPVPSSIIINNIGYLWAFINDDELHRIPVEIG
                     QGINLLNSMSIKCLNNLHPIDTVDFSTFEKSINIKNCIKKIKNLIPNRKLTIAGNIRV
                     PSLGLCPLNNDSAIVSRLSCKAPCHNGNYALKDPSLKKVLPFVVDGFCRMHMFQDYIL
                     HMYEYVPKLEQIGINEFVIDLSDLPPKYVSILLTHFLNTLAGFEKPCKDTINEYCIQE
                     LG"
     gene            complement(8712..9410)
                     /locus_tag="CPT85_04925"
                     /pseudo
     CDS             complement(8712..9410)
                     /locus_tag="CPT85_04925"
                     /inference="COORDINATES: protein motif:HMM:PF01136.17"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    8756..8767
                     /estimated_length=12
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            9741..10724
                     /locus_tag="CPT85_04930"
                     /pseudo
     CDS             9741..10724
                     /locus_tag="CPT85_04930"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    9752..9753
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    10336..10358
                     /estimated_length=23
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            10748..12757
                     /locus_tag="CPT85_04935"
     CDS             10748..12757
                     /locus_tag="CPT85_04935"
                     /inference="COORDINATES: protein motif:HMM:PF03958.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23436.1"
                     /translation="MFNDRKQKQTGKFVLPAVGALTLAMAVTFGYATVAQAQMQASIT
                     KPALRTEYKSSGSISLDNSIDWNNGNRKISVSLRDSDLKQTLRMIADKAGLNIIFHSS
                     VGGTITLDLVNVTLNDAFKMIMQASDLSFFIDKGTLVVMTKEASLSSDIGKQNMMTIP
                     VKYADSSKVAEFLNSNVFSTNRPGLSNNKIVVTNPVTNELIIFGTQNDYKMAQKIVSK
                     LDVAPKTISYRVNHTTPKEMATLICQSLFPNATMGGATTGKTGGSSASSGASATGGSA
                     TGGASSLGSGSSGSSSGSSLGSSSSSGSSGSSSNSSKDIALGEGKVACMIKGDVSANS
                     LKSLSGTSLTVTYFPQKGTINITGGSDSQAEMIKDFIKANDKKQPQAYVEMQIVELSE
                     NGSKDFQNTWTLLTPFFSGRFDGNSGLTPYNNGSQSAPIFFTGGPFNTVTGSTSSVDG
                     NGNTTTSDVVTEYFRYHGKNTVAWTVNYLIKNGKGRLLANPKVMVTNGKESVIDLTSD
                     YIKTTDEEILTSGLGTSAAGVSRTYELGEDSGISVHLTPFISPDGYVTLNLSPNYATI
                     KEQVMSPSSSGKGNIIAATLLQRRNLELSNIRIKDGETLVLGGLIQEEERKSVAKLPI
                     LGDIPYIGSLFRSTTTSNTKNELVIMITPHIIKDTEDVASESENL"
     gene            12870..14972
                     /locus_tag="CPT85_04940"
     CDS             12870..14972
                     /locus_tag="CPT85_04940"
                     /inference="COORDINATES: protein motif:HMM:PF05157.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
                     /protein_id="DAB23437.1"
                     /translation="MNIETVNKIKSNINGKFAEIFTKEDLLEHKFIPINKQAGFFFIV
                     TKEGTNKSELSEFIAVKDSDTLKFISLDEEGFNSLFDYYLSTFYPEDTQSVVIEQEVE
                     PVQQEENPTAQQQVPPAPPVHNEGQGKKRIGEILIENGELTEAQLVEALTQCKKTGTP
                     IGSMLVQMGFITVDQLKDALSAQQGYQHVTAQQLNISEGVIKILPEDFIRENKLVPLA
                     SDGRFLDIGMVNPNNKKALNEVVYLTGLRPRVLLMSYMEFKSCMTKYFGRARKETKEI
                     IRKIEQEALEFEVEESLWEQVERELEDTSGSVANFATKIITDAIDLKASDIHIEPRLD
                     CYTVRYRIDGILRRVLDLPNKVESSLIARFKVLSRMNIAEHRRTQDGTFTVKYNGISY
                     DFRINTLPVAGKEKMVIRILAPAASIKTEDRVIKLAGGTEEDLERINKMVAAPNGIIL
                     AVGPTGSGKTTTLYSVLKSLNNEGVNITTLEDPVEIKIDGLNQSQINPKAGITFASCM
                     KAILRQDPDIILIGEIRDFETLETAVAAALTGHLVLSTLHTNSAAATITRLIQMGAAD
                     YLISSTLTGIIAQRLVRRLCPKCKEAYNPTLEEAKLVVANPEEQREFMKRTIYRPKGC
                     FDCNNEGYKGRIGCYEVMLINKEIKKMIAHSAHDVEIEEAAVGMGMKTLQASCLGHIL
                     RGETTITEFVRVLGPVTE"
     gene            14990..16189
                     /locus_tag="CPT85_04945"
     CDS             14990..16189
                     /locus_tag="CPT85_04945"
                     /inference="COORDINATES: protein motif:HMM:PF00482.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23438.1"
                     /translation="MTIFNYIALRNQSEIVNGKIEAEDIKAAREAIRNLGLVPTKVFG
                     EDKKASAPKVRLSPLSLQELIDFTGTFRTLISTGVPIIEGLVFLEKDAVSSRIRLLAR
                     EIRKQVIAGSTFADTVAKYQEIFGSIYVGLTKAGEDSGEMEKTLDRLAELLKKQAAIK
                     GRVIGTLIYPCFVIVLAAIVVTVMLMFVFPAFKEMFDQSGAKLPIFTQICIDLGEFLK
                     AYWYLTLLAPVAIGALIYTAFKNPVSRRILDDVFLKLPLVGDMLKYANFSNFITVMFV
                     AYEAGIPIVDCLHLGNLTIDNRTIKNKITEAINKVQQGTHLSTALRAANIIPSMVLFM
                     IATGEQTGKLGELLNQSVIFLDKKLDDIIDAMTKMIEPLMLIVIGSIVMFLALALYLP
                     LFQSYQL"
     gene            16210..16530
                     /locus_tag="CPT85_04950"
     CDS             16210..16530
                     /locus_tag="CPT85_04950"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23439.1"
                     /translation="MAEDFEHIEPFEIEELGDNDFTNGVWSERVLVITQDYEIKGSVF
                     MPKIGKRSRVLSDILNGKKRFVAIKDCEVSYRLMPNRRTEFHDFVQLNINSIIILRPT
                     SDSE"
     gene            16569..17588
                     /locus_tag="CPT85_04955"
     CDS             16569..17588
                     /locus_tag="CPT85_04955"
                     /inference="COORDINATES: protein motif:HMM:PF11335.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23440.1"
                     /translation="MEKKSIQLLSELTCADFVAFCKTNIIPHLVTLENERVQKLNKVH
                     NFNKICTFLMLFIVTGFCIAFICVFLSGNDSSKPMGKISIALSGMVMIAVCSAVIIES
                     KIETLISPMFQEFKSSVYTLLFSYFGQFKYYPKEIPLSYPVYDSALTMVKGLKLFDNF
                     NIYSIDDCITGVYNGLNLRILDLDLQKGEGRQKDTIFDGVLLECNCNKKFHSTTIVRL
                     NKDVVHSPWQSGAMNRVALEDPVFEKEFNVYSTDQTESRYILTAAFMNRLLKAQKKLG
                     IPLTCSFENGKMYVAIHNNKDWFDIDFVNDSFTDIRTFQKILIDLVEVLSIIDTLNAD
                     SNIGM"
     gene            17663..17739
                     /locus_tag="CPT85_04960"
     tRNA            17663..17739
                     /locus_tag="CPT85_04960"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:17697..17699,aa:Ile,seq:gat)
     gene            17808..18755
                     /locus_tag="CPT85_04965"
     CDS             17808..18755
                     /locus_tag="CPT85_04965"
                     /inference="COORDINATES: protein motif:HMM:PF11335.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23441.1"
                     /translation="MQSTEEFRKNFDSIYYKKIVGLLKPFEQNRLFTLRLCIVLIIIG
                     LLXSIDVYCIANQDTLFPLLSTKQIEYLLSMIMMVGILVLCSPVYLAKDFEQTLKREV
                     MPEILKNLKTFKWRTKSSISDGYINFSDLFADYNRRFDDDNFSGKYKGVTINICETEL
                     GKKSGSGKNSSYIVRFKGVXNLLPEREFKSTILIKKRGLLNFVPEGLQEVDLEDVEFE
                     KRFNVYGDDQIETRYVLTTAFMDRFKNIAFVFKSDKIEASIKDTGILIAITVKRDLFK
                     VAKLYRPICDYSQFKQMIDEFSSILELIEELKLNQNIGL"
     assembly_gap    17947..17948
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    18346..18347
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            18856..19551
                     /locus_tag="CPT85_04970"
     CDS             18856..19551
                     /locus_tag="CPT85_04970"
                     /inference="COORDINATES: protein motif:HMM:PF01464.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23442.1"
                     /translation="MSNLLSSLKIITNDYIVAKDDTTKIVKKFIPQEAVKKLSESNNK
                     IKMEREILHKKDAEEQAALEKQTKIITNIITNDPAAPKNLDNQQMAKWIIDAAKEFNV
                     DPLVITSIAQQETHFTQNVPTANGSGIMQLTGITIKDMYLRSNVYDKALLPYLKKYKN
                     PEQLKAAMRKDPELNIKLGTALYKQKLKQAKGDEKRAFMNYNGSNIKQKYSNDVYARV
                     LNARQQSGFVSEA"
     gene            19599..21794
                     /locus_tag="CPT85_04975"
     CDS             19599..21794
                     /locus_tag="CPT85_04975"
                     /inference="COORDINATES: protein motif:HMM:PF03065.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase"
                     /protein_id="DAB23443.1"
                     /translation="MAKKLSIAFIWHMHQPVYKSDQNGIYLMPWVRLRAVKDYLDMLL
                     VMDKFPGLKLNFNLVPMLVSSIYDYGYNGAHDIFSRLTITPVEDLSDDEKEFILNHFF
                     DANYQNMVLPNTEYKKLYDKRFQNADLGINDFSPQEYSDIMAWFNLIWFDPMFRENED
                     IKALFAKKNGEFTLSDRVKIIDLQREIIKKIIPAYKQFQDDGKIEISTSPYFHPIMPV
                     LLDRNDVVEANPNADYPELESDMSEDAELNVKRALDKFEEIFGKRPNGMWPSEQCISE
                     KTLQLFMKMGLKWTISDEGVLEQTLKKEFVRDFRGYLEDPYELCHSYRYNHDGKQIGL
                     LFRDAVLPNLIGFEYPHHDPVKAANDLYDRIKTKQKKLAGSPDKMHLLTIAMDGENCW
                     ENYQNDGHEFLDTLYKLIQDDEDLETVRVSDYIDAVNQLDWTGTPFELDHVRPGSWIN
                     RDFLLWIGEPTKNLAWLYMDKARCDLKEYEAQHPDDPRLPLAWEELYISQSSDWYWWY
                     GEPNDSGQDDIFDHLFREHLRNIYKLIKQPVPEYLETPLAEFLEARSRYPKAAFDSFE
                     LNGKDADAKWDVGGCIDIPAPPTMQEKRFFNKICFGYDTDNLYLRFDINKFILDKENG
                     FKDFNQIYIYFKNRTETSLHSAPIRTVNKTETIIPLLREPYNCEVKLTLFKNFHFNAQ
                     LAHATRDNLWVLQLKNGIEHVFEDYMEVKIPFDDLRVNEXXNFSLYRDL"
     assembly_gap    21764..21765
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(21862..22077)
                     /locus_tag="CPT85_04980"
                     /pseudo
     CDS             complement(21862..22077)
                     /locus_tag="CPT85_04980"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    22056..22064
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(22248..22490)
                     /locus_tag="CPT85_04985"
                     /pseudo
     CDS             complement(22248..22490)
                     /locus_tag="CPT85_04985"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    22266..22297
                     /estimated_length=32
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(22487..22843)
                     /locus_tag="CPT85_04990"
     CDS             complement(22487..22843)
                     /locus_tag="CPT85_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007567946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23444.1"
                     /translation="MTKISAILPVYNVEQYIKDCLDSIINQTMDDIEIICVNDGSLDN
                     SLQVLEEYAQKDARIKIISQENQGQGIARNNGLKIANGEYITFIDPDDWVDVDMFEKL
                     YKSAKNLILILFFVTQ"
     gene            complement(22874..24892)
                     /gene="nadE"
                     /locus_tag="CPT85_04995"
     CDS             complement(22874..24892)
                     /gene="nadE"
                     /locus_tag="CPT85_04995"
                     /inference="COORDINATES: protein motif:HMM:TIGR00552"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="DAB23445.1"
                     /translation="MLSYSFFILLIFIYNKNMEEKIYKLTQQIDNDLQYNNLSEEEKD
                     KIAKELKPLLPEXXVLAQTNPTSGDIKGNAKKAFQWIKWAQRLDVDTIVFPEMYLIGY
                     PIGDFIDRFPLIVEENIEWLEAIAQKVKGKTKVIIGFAEFNKEKTGKKYFNSIAVINN
                     GKIERVIRKSLIPNYAEFNDYRHFEPSPVESLNRIIQIGNKKAGIIICEDGWNDFDFF
                     DKNLYSIDPVETVVKEQHPDYLINCSASITRAKKEQLKHNMLGFAAKKHKTPIVYVNQ
                     TGSGECMSFEGASRAYDAQGNLIAMAKSYQEQFFVVSPTQGGDVNPLPKGLEKTLTSQ
                     KAFTLDHEPDLERTYLTIVQSIRDYFNKTGFKRAVLGLSGGLDSTVSAVLLADALGAQ
                     NVFGISMPSKITSAESKNDAKELADNLGINFTEISIKDMYDSTRSKFDEVFSTIEKHW
                     DNRFKESFTNDNIQARSRALILWGIANEFGSCLPIATSDKSELYMGYATINGDMSGGF
                     SPLADVSKTKLFALARWMNNNRKIKNAIPESIIQKRPGAELAINPKTGKPLLAEEALM
                     PYEFLDEVIWRVENLQQTICDMMNAEFLHEIHMKQQGTPISKEQKLEWLQKFFRRMST
                     ALYKWTIMPPSPIVDARSINKTEYRHPVISSKINYHKTSFEDKLKELF"
     assembly_gap    24721..24722
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(24927..25157)
                     /gene="rpsR"
                     /locus_tag="CPT85_05000"
     CDS             complement(24927..25157)
                     /gene="rpsR"
                     /locus_tag="CPT85_05000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006572919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="DAB23446.1"
                     /translation="MARPQIDKNKRKSCNFCADKVEVIDYKDAQKIRRYLTEAGKILP
                     RRITGTCAEHQRMLAKAVKKAREAALINYVYD"
     gene            complement(25221..25628)
                     /locus_tag="CPT85_05005"
     CDS             complement(25221..25628)
                     /locus_tag="CPT85_05005"
                     /inference="COORDINATES: protein motif:HMM:PF00436.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23447.1"
                     /translation="MSLAKAVISGTVYRAPEKRFTSNNVPISAFAMNISDTEETLVRV
                     IAKGNLAATVEETIQKGDRVVVEGRLQNNTVKNEDGSEKRIVEIDAYAMEKLAGSSSS
                     ASAPAAKNSPDTLVQFGQTDFSDDLIGEDEIPF"
     gene            complement(25652..25948)
                     /gene="rpsF"
                     /locus_tag="CPT85_05010"
     CDS             complement(25652..25948)
                     /gene="rpsF"
                     /locus_tag="CPT85_05010"
                     /inference="COORDINATES: protein motif:HMM:TIGR00166"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="DAB23448.1"
                     /translation="MRKYELLTIIKPNMDAEEADKVIAKIEESIKSLGGNVTAVDKMG
                     RKKLAHDIQNFRDGHYVVQKLELDPSKVTEFKRQLSLNENVLRTMFMEESKVSA"
     gene            complement(26061..27074)
                     /locus_tag="CPT85_05015"
     CDS             complement(26061..27074)
                     /locus_tag="CPT85_05015"
                     /inference="COORDINATES: protein motif:HMM:PF00389.28"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="DAB23449.1"
                     /translation="MTKIIYFDVQDDEKEFLIKNNEGKYDYHLTTNSLNNIIEVKEEY
                     KDAEIISVFTNSRVSNDVLAQFSNLRLIALRSVGFNHIDLDYCNAHNIVVENTPNYGN
                     KSVAEFAIGLLLDVCRKITKSYIDYKEMHVEPQALIGQELGGKTVGIVGLGAIGSEFA
                     RLAYGFDMNILGYDHSQKQELVENYRIKYVDFDTLLKESDFISLHAPLTKDNRHMFNE
                     ESFKKMKNSAVLINTARGELIETSALFNAISKKEIAGAGLDVLESEETISDPDYLIDI
                     NRLNECALKQTILNTRLQQLPNVIITPHIAYNTKEAINRILNTTMTNIAAFLDGVVEN
                     NVN"
     gene            complement(27170..27598)
                     /locus_tag="CPT85_05020"
     CDS             complement(27170..27598)
                     /locus_tag="CPT85_05020"
                     /inference="COORDINATES: protein motif:HMM:PF02742.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23450.1"
                     /translation="MIKLTPSQEDYLETIYLEAEKNGCAKVTDIAKLLDVKKASVTGA
                     LSSLCEKGLINYAPYAPITLTAEGEKEAKKILQRHEVMSVFLKNILHLSEDESTLNAC
                     RMEHIMTEEMFSRIKSFSAFIQDYCSKNQDFSRQIENLYK"
     gene            27694..>29113
                     /locus_tag="CPT85_05025"
     CDS             27694..>29113
                     /locus_tag="CPT85_05025"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23451.1"
                     /translation="MTYKIAFGNISFKNNAQIQKPEKKDNPSPVVKNAQPLAKPPVST
                     LLAYVTYRADSKNAGEVGVKFFNTLSVEQMKKQYGELAQKTAAELAQRAGKPNQVLNW
                     IEVLPQTQLKRLDEIYALADSLKQNGSKKLGIIGIGGSKHTIENLLSLTGNADKAVFL
                     SAVDPDSIDDFVKKLGDPQKAAVLVASKSGTTLEPSVDFEAVRKALKDDFKNYVCITD
                     KDESKSKLRQLANKNGYKCGIIHDECGGRFGAFDDHTLTALAYCGMSKDDMKKMLEAS
                     LKAQKQFLSDDITTNKALQRAVFNAHSVLNGKQNQYDYYFSDRFEGTALWNTQMKKES
                     HKSLYKVSGDLTGPAFLHNSTEADLDEGNDSSFFTFNTIKNAGGEKYKAYNALINGSL
                     KAYSELHPVSLVELKDLSPSSIGEFVELKHFEAMYTGMMLRALKSKDSHTEFKHPDVL
                     PEVVQPHVGIYKKEVEKILKSTP"
     assembly_gap    29114..29179
                     /estimated_length=66
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<29180..29527)
                     /locus_tag="CPT85_05030"
     CDS             complement(<29180..29527)
                     /locus_tag="CPT85_05030"
                     /inference="COORDINATES: protein motif:HMM:PF13453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23452.1"
                     /translation="MKKVYLEDQGFMVDICLDGCGGLWLDNRELNKLDEQKEDITPLK
                     EAYKGKTFKKVDKTQIRECPLCHKPMVKNNVSAKQEILIDECYLCGGKFFDKDELEQM
                     RAQYHSDDERIADV"
     gene            29711..30505
                     /locus_tag="CPT85_05035"
     CDS             29711..30505
                     /locus_tag="CPT85_05035"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23453.1"
                     /translation="MEVKNFLNKHKVLISVILGLIVIFYLAFLFVVPNVINLNNYKKD
                     IQKLVSDTTMLNLDFDNLKIVTTADLKAGVNVENAALSYADGKKIASVKDAEIKIAVL
                     PLIFKTLRXISAANLEANVTLQKDGQVDIVRHMEKVLAENSSAADTDISDDLSEDEDL
                     DMEMQEFPVKFSYKLPVVKINNYLFVLNDEKNAAALNLKGDTFVFDEAVLNKHFRVSS
                     SGKILLNGKENVLYNFRVKTFWPAVASSQDNASSGXXSTVNLQSKS"
     assembly_gap    30041..30042
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            30456..32267
                     /locus_tag="CPT85_05040"
                     /pseudo
     CDS             30456..32267
                     /locus_tag="CPT85_05040"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    30469..30475
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    32186..32198
                     /estimated_length=13
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            32242..33384
                     /locus_tag="CPT85_05045"
     CDS             32242..33384
                     /locus_tag="CPT85_05045"
                     /inference="COORDINATES: protein motif:HMM:PF13502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23454.1"
                     /translation="MPVKIADGDLNIQKFKMKQAFGLFEASDISSDFTLYNDLFTLKN
                     FKASAYGGNVTGLIKYNVATTQVNAKINGSKINANPAVSVFTGLKDQIVGNADFDADI
                     KLKGATYEQQMKSLNGKVNFSLKDGQMGSLGRFETFLKADNLLSQSFVSTKIGSLVST
                     VAPYNTGKFAYLKGDIDLKNGIAFLAPVQMSGPHMSLLLNGNVNILSMISNIEILGSL
                     SPEVTKSLGPVADLSVEKFASFIPKFGAKIASALSMYNAAANKSELEKIPALTPEKTN
                     TKSFKVLLNGNLNNPAGAIKRFQWLNTPEKIEEEQAAIEKSLMPSLPVTKEELKEQIK
                     EDVKQGVTNALQNNEKVQEIQQNKAVKTLGEIYKFYKKSGSTETQE"
     gene            33445..34722
                     /locus_tag="CPT85_05050"
     CDS             33445..34722
                     /locus_tag="CPT85_05050"
                     /inference="COORDINATES: protein motif:HMM:PF02321.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23455.1"
                     /translation="MLLSYCPVYAAHVKKINLDDAIQLSLSNNLDLQAARIEVELAKN
                     GVKIANRLQNPDFNIFYNYGRAGRSEPQQIGLTETVEIGKRAPRKKLAKSELYKKELD
                     VKLAEFTLEMDVRETYVDLVGAKTVLNDLLAQDMLLCELADIAQKRFEAGKATQTDVI
                     QAQIALNRLATSVNSARTAVNAARNDFNKALNIKEESDIIYDTKEDFLPGETVFISLK
                     TPDFNKKLPPFELVAQKALEKRLDIRAAKQEVDIARKNLTVVSRQRIPDVELFGGYAY
                     LAHTKSDSGNYEAGAYAGAALNNIPVFYTYKPEIKNAKLQIEQAQINYESAKNKALKD
                     LSTAYERLITSQTNLLFYKNKLVKDSAELIRISQKNYKEGKSDLTSVIMMQQSFREIV
                     TGYNNALTDYYTDWIDFLREVNQEDFNLFDENL"
     gene            complement(34725..>35066)
                     /locus_tag="CPT85_05055"
     CDS             complement(34725..>35066)
                     /locus_tag="CPT85_05055"
                     /inference="COORDINATES: protein motif:HMM:PF02629.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="DAB23464.1"
                     /translation="GLALAKYDSFNSYGLNILALFDNDPQKVDMQVNNKQIFHISKLP
                     NLTQRLGVDIAILTVPRQNAQQVADFLIDSNIKYIWNFTPAVLKVPQDVKVWNENLMG
                     SFLQFACKDII"
     assembly_gap    35067..35114
                     /estimated_length=48
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<35115..>35259)
                     /locus_tag="CPT85_05060"
     CDS             complement(<35115..>35259)
                     /locus_tag="CPT85_05060"
                     /inference="COORDINATES: protein motif:HMM:PF06971.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="DAB23465.1"
                     /translation="TISSPQIAQRLGIDDSQVRKDFKLLNNAGKCRVGYMVKDLKDSI
                     EKTL"
     assembly_gap    35260..35279
                     /estimated_length=20
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            35505..35759
                     /locus_tag="CPT85_05065"
     CDS             35505..35759
                     /locus_tag="CPT85_05065"
                     /inference="COORDINATES: protein motif:HMM:PF01257.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23456.1"
                     /translation="MQKEKTQTITIKVCMGSSCFARGNAANLDYIENFVKENGLDAKI
                     EVIGSRCENNCAVGPNVIINGENCESASPVRLEAILKKYL"
     gene            35794..36750
                     /locus_tag="CPT85_05070"
     CDS             35794..36750
                     /locus_tag="CPT85_05070"
                     /inference="COORDINATES: protein motif:HMM:PF00037.25"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23457.1"
                     /translation="MNNQYPIYTLKNECVDCYKCVRQCSMKAIRIENGHASVIPEKCI
                     ACGHCVLVCPSEAKKIRNDLNRARAVLTAKKRVFVSLAPSWAGFFNCNTEQIITAFKK
                     LGFEGVSETALGAQEVSIEVTKILSDRDKKLHISSACPAIVDYVRLYMPEYTKFITPV
                     GSPAMTHAKLLKKRYGEDIGVVFVGPCIAKKNEADKNPSLIDVSLTFHEAAQWFEQEN
                     IVLGQIDADEDVKFVPKKAYEGAYYPIEGGMNKTIRLSGCAKDIQLVSISSIPAFRDS
                     LQNLDDSKIDRTIFLEALACPGGCANGPCMDXFFKTGCACNV"
     assembly_gap    36715..36716
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            36743..37528
                     /locus_tag="CPT85_05075"
     CDS             36743..37528
                     /locus_tag="CPT85_05075"
                     /inference="COORDINATES: protein motif:HMM:PF04060.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23458.1"
                     /translation="MSDILRTVKLRDDIPSEPEVVVEKEYKERPQNNRHYTPEQIAEA
                     MASIGKHGIEDELNCGGCGYDTCRQLAQALLSGDAEPSMCVSYMRKLAIRKASAMLRS
                     MPSAIVMADANLNIIETNEAFVRMFAPDLLEIFKDRPEGLAGGALDRVVPFTDLFKRT
                     LKSGKDIHKERYAVDKNLYDIAVFEIERNKIVGAVITDVTKTEMKREQIARKAHEVIE
                     KNIATVQNIACLLGEHMVDTELLLSQIAQGYEEKPEDDEQEMK"
     gene            37538..38713
                     /locus_tag="CPT85_05080"
     CDS             37538..38713
                     /locus_tag="CPT85_05080"
                     /inference="COORDINATES: protein motif:HMM:PF07228.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="DAB23459.1"
                     /translation="MPEESFFVDIDCYQQKKDGQNTFGDCFKSKRFTDEGRLLAVLSD
                     GLGSGIKANILATMTATMILKFIEEGKDILKATEVIMNSLPVCQVRKISYATFSAFEC
                     TDDGYIKIVEEGNPDFIHIRNGQVLEHEPRVITSKKFTNRHMHLYKFKLEPEDRLVFC
                     SDGVTQAGMGTDEYKLGWRREGLIDFVEGELRRNPTISSRHLACEIVKEAIRKEPERK
                     AKDDVSALILYFRKPRKLLIFTGPPYRQDRDAEYSKIFDDFDGRKAIVGGTTANLIAR
                     ELGREITTEKYNKGMLPACSHMDGVDLITEGILTLTKVLEYLNEGYDRWPDDAAGRLI
                     ELLLDSDVIEFMIGSKLNQAHYDPDLPLELEIRKNVVKQLEKILSGRYIKKVNLKFI"
     gene            38755..39018
                     /locus_tag="CPT85_05085"
     CDS             38755..39018
                     /locus_tag="CPT85_05085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013759424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23460.1"
                     /translation="MEESGKILVELCFGTTCFVMGASKLQELESLIPPQYKKYVDIKA
                     HTCLDLCKNATYMKAPFVKIEGEIISEATVEKVLKAIESKLNG"
     gene            39011..40483
                     /locus_tag="CPT85_05090"
     CDS             39011..40483
                     /locus_tag="CPT85_05090"
                     /inference="COORDINATES: protein motif:HMM:TIGR04105"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-hydrogenase large subunit family protein"
                     /protein_id="DAB23461.1"
                     /translation="MDNSNTTHLKREVLVRLIRAFINQEMGSIRELPFQMRPKNGDAP
                     YRCCIYKERAILRQRAIAGLGCSVETDDEMTSLNEYAKQAMERKEPEGEILTVVDAAC
                     KGCVPSRVYVTELCQGCVARPCVSTCKFGAIQIKDGRSVIDGEKCKNCGMCISVCPYS
                     AIVKLKVPCEDACPVGAIHKNEMGHAVIDFDKCISCGACVGACPFAAVHEKSEVIDVL
                     KAMRDGKRVVAMLAPAVVGQLPVSINKIAQALVESGFSEVFEVAQGADTTARTEAEDF
                     KERMEKGNEFMTTSCCAAYNELVDKHIPEMKPFRSETRTPMHYTAEFVKNKYPDAVTV
                     FIGPCVAKRKEAQKDEYTDLVMNFEEMGALFVARGIEVANCKDYEFANEASKEGRNFA
                     ITGGVAQSVKVALKDFPELFPTCVNGLNPKSVRDLKNWAKKGQCPEGNLVEIMACEGX
                     GSACLNNKRITTKKVSEYANSSKCINDLDSCEAKKETLNK"
     assembly_gap    40359..40360
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            40623..41630
                     /gene="gap"
                     /locus_tag="CPT85_05095"
     CDS             40623..41630
                     /gene="gap"
                     /locus_tag="CPT85_05095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003867202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="DAB23462.1"
                     /translation="MAKKVAINGFGRIGRNTLRAAVKEGIFNEIDYVAINDPGLKPED
                     AARLFKYDSVMGKFDGEVEAYDEGIIVNGKKIKFFAEKDPANLPWKDLGVDVVVESTG
                     FFTDAEKAKAHIAAGAKKVIISAPATNEDITIVLGVNEKEYDPAKHNVISMASCTTNC
                     LAPVAKVIKEKFGIVKGLMTTVHSYTGDQRILDAGHKDPRRARAGALNIVPTKTGAAK
                     AVALVLPELKGKLDGFAMRVPTPDVSLVDVVFETEKPVTVEAVNAALKEGADGHVLCY
                     TEEPLVSTDYIGSSQSSTVDALLTRVMGDNMVKIISWYDNEMGYSTRLAETTKMVAEK
                     V"
     gene            complement(41683..41985)
                     /locus_tag="CPT85_05100"
     CDS             complement(41683..41985)
                     /locus_tag="CPT85_05100"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23463.1"
                     /translation="MKIYAVNDNIIDINKITFSVFNKIFKLMQKIQKMPDEELKTENA
                     YLHSPEAVDAFKSYMNHAKYNLDQVIDLAHTRDYARKGAVTLGNKFEKKLTEYIYS"
BASE COUNT        13461 a         7455 c         8250 g        12613 t
ORIGIN      
        1 atgtttatac ggtctgtgga gcttaaaaat tacagaaact acaaagattt gagccttgag
       61 ttttctaagg acaaaattct tttgataggt aaaaacgcac aggggaaaac aaatctttta
      121 gaggctgttt attacatgtc gtgcttaaac tctgcacgtg caaaaacaga cagtgagctt
      181 attttgtggg gagaaccttt tgcaaggcta aaggctgttg ttgaaaaaaa tgacatggaa
      241 aaagagctgg atgttttgat taatcctccc aaaagaaaag aaatgaaagt aaatggtgta
      301 aaaaagagca agtctgctga tttttgcacc aatctttctg ttgtgtcttt ttctgtcaac
      361 gatttacttc tgttaagagg agtgccggat gacaggagaa gctggctgga tatggcaatt
      421 agccagatat accccgctta tcctgacagg gtagcaaagt acaacaaaat aaggatacaa
      481 aaaaacaatc accttaaaga cataaaaggc aacatcaacg cagacacatc tcttttagag
      541 gttttcaaca gccagctttg tattagcgga agcaacatta tatttttgcg tttaaagttt
      601 ttaaaagagc ttcaaaaaat tgcaatggaa aaacatatac aaattgcaca acatgagatt
      661 ctgacaacgg tttacaactc aacagcggca ggagatattg atttttcttt tgacaaagag
      721 cttactgtag aagaaattgc agcacaattt gagcaaaagc tgaatgaaag aaagctggaa
      781 gaaattatca gagcacaggc gcttgtgggg ccgcacaggg atgatgtttc gttttttata
      841 aacggtattg aagccaaaaa gtttgcctcc caaggccagc aaaggactgt agtattgagt
      901 ttaaagcttg cagagcttga gcttatcaag gaaaaaattg atgacacacc tgttttgctt
      961 ttagatgacg tattagcaga gcttgataac atcaggcaga attatctttt aaatgcgatt
     1021 ggagcgaata cgcagacgat tatcacatct gtggacacgt tgcattttga tgaggagtat
     1081 ttgaaagatg tggagatttt taaaatttct gaaggcaaag tagccatata acaccccaaa
     1141 aagcgaaggc gcagccgagc ctaatataaa aaccaagcag ggagcagccc gcgcaaaaca
     1201 gcaagaatcc cctcaaaaca gggggttcgg gggcagtatg cccctgatgg cgaagtctgt
     1261 ttattagaga tttttaagga tttgagtaga aatttacagc cccttgtggg atgaaatttc
     1321 tgctcaaaga ctttaaaagc tcttttgagc aagcgtgttt ctttcttttg gttcgttttc
     1381 tttctttgca tcgcaacaaa gaaagaaaat gaacaagagc aatttttaat tgcgttaaag
     1441 tattttttta ttttttattt tttttatcgc attctttcga accccctgtt gtgagaggcg
     1501 gcctttgcac gagcctttaa gcgggggatt tattttttcc cttatgtgtt attatcaatg
     1561 tatgacagat atactgacac attttaataa taaaagaata ctcaacctcg aaaaaattac
     1621 cgcattttta aagaaaaata actcctttat ggttagcggg ctgacttcat ttttgcggtt
     1681 gtttctgctt gccgatatat accgccaaaa aagaaccgtg tttgttacaa acaccgaaca
     1741 aaacgctctt aaatacaaac acgacctcga aaaatttttt aatatcgagt cacaaatttt
     1801 tccctatcaa gatatctcta tttatgacgg tgttgctcca aacctctaca aatacgcgca
     1861 gcaggtagaa atcctgaaaa atcttgaaaa tatcccgctt ttgatagtgc ctgtaaaagc
     1921 aatgcttgaa aagtttcccg aaacatcatt ctatgaaaaa aacgctataa atataaaaat
     1981 cgatgacgag atagacacct cgcaaattgc acaaaaactt gtttctctag gctacaaaag
     2041 ggttacaatg gtgtctgaca taggagaatt ttcactaaga ggcgatatca ttgatgtgtt
     2101 ttctttgaac aaatacgctg cacgtattga gctgtggggc gatactgtca ctgatatcag
     2161 gtattttgac aacaaaaccc aaagaagcgt aaaaaagatt aaagaaacaa caatattgcc
     2221 tgtttacaag tttttgttgg acgaagataa tgcggaaacc tttaaaaatg aactaacaca
     2281 ggctgctgtg actatggact ccggagaaaa tgtagatatt gtaagagaaa atctgcaaga
     2341 aacactggaa aaaattgata cggaaaagta ttttgacggc atagactatt ttcaatctta
     2401 tttgaataaa aaaatgaaaa gcctaccgca gcttttgttg gatagccaaa atccccctgc
     2461 actggtgctg gatgagtcgt ctgaaatttt ttcaaaattt gcacagattg atgaaaatta
     2521 cgaaaaacag attgaagaaa atacccaaaa agctcttgcg ctgcctctga aaaataaggc
     2581 acaccttgat tttgcggatt ttcaaacagc agttgccgga cttcaaaaaa tatcttttga
     2641 caattttctt gatacagtca gtgactacac tatagagttt gaaagctctc ttatcccgag
     2701 tttttcttca aaaatggagg aaatccttgc ctttgttgaa gaccggatgc aaaaaggcta
     2761 taaagtcgtc attgcaacag attacaaaaa ccgaatcgag gatgtttttt gcgattttga
     2821 acttgctgtg tcagatgatt tctccgtgca aaacgaggtc tttttggcag acaaccttgc
     2881 tcttggcggt tctgctgtag aagagctgaa actcgtagtg ctgacagata aggagctttt
     2941 taataaaaaa tcaaaagata ttacagcaaa aaaacagaac taccacaagg aaagcgctga
     3001 ttatatagaa tccgtaaacg atatcaaaga aggcgagtat gttgtgcatc aggtgcacgg
     3061 ggtggggctt tataagggct tgagcaaaca ggaaatagac ggccagctca aagactacct
     3121 cactatagaa tacgcacagg gcgacaaact ccatatgccg gcagagcaaa taaaccttct
     3181 tgtgcgctac agaggctcag gggctgttgc tccaaggctg tctcgtatgg gcggtaatga
     3241 ttggaatatc acaaaaacac gtgctaaaaa ggctattgaa gatattgcaa aagatttgct
     3301 gcgcctgtat gcaaagcgcg aggtcgcaca gggcattgcg tttgagcctg acacagtatg
     3361 gcagtgcgag atggaagaag catttgaata cacagaaacc cctgaccaga tgcgtgctat
     3421 tcaagaaacc aaggctgaca tggaacttga aaagcccatg gacaggctca tttgtgcgga
     3481 tgttggattc ggtaagacag aaattgctat ccgtgcaatt tttaaagctg ttatgtccgg
     3541 caaacaggca gctgttattg tgccgacaac aatccttgct atgcagcact ggcagactat
     3601 ttcggaaaga ttcaagcctt tccctgtcag ggtagagctt ttatcacgct ttagaacggc
     3661 aaaagaacaa aaagaaacca taaaaaaact tataaaagga gaggttgatg ttgtaatcgg
     3721 cactcacagg cttttgcagg atgatattgt gttcaaagac cttggcttgc ttgtaattga
     3781 tgaggagcac agattcggcg taaaacataa agaaaaactc aaaatgcttc gcaagaacat
     3841 tgatatttta agcatgtccg ctacacctat cccccgcacg ctttacatgt cgctttccgg
     3901 tattaaaaat atgtctgtaa ttaatacagc gcctatgaac aggctgccta taaaaaccta
     3961 tgtgggccag tacaacgaaa cttatgttaa aaacgcaata aaccacgaac ttgaccgcga
     4021 cggacaggtc tttttccttt acaaccgtgt ggagacaata tacgagtttg cagcagagtt
     4081 gcaaaaagtt gtgcccaatg cacgtatagc cgttgctcac ggccaaatgg atgcaaaaac
     4141 actggaaaat atcatgctcg aatacgcgga gcacaagtat gatattttgc tttgcaccac
     4201 aattattgag tcagggcttg atataccaaa tgccaacaca atgataattt atgatgcgta
     4261 cagattcggg ctggcgcagc tttatcagtt gagaggacgt gtgggcagaa gcgacaggca
     4321 ggcatactgc tactgttttt ataagagcca taaaaagctc acccccgagg ctttgcagcg
     4381 gctcaatgca ataaaagaat tctcaacgct tggcggagga tatcagattg cgttaagaga
     4441 cattgaaatc cgcggtgtgg gcaatatcct tggtacaaaa cagcatggcc acatgacaag
     4501 cgtcgggttt gatacatact gccagctgct tgaagagaca atcaatgagc ttcaggaaaa
     4561 cggcgaaaaa ccgcagccgc ctgctattgt ggatatcaat gttactgcat ttattccaga
     4621 tgaatgggtt ggttcaaaag agcaaaagat gattgaatac aaacgattgg ccgatgttaa
     4681 aacgctcgaa gagcttgatt taatccatca ggaatggaaa gacaggttct caaaaatccc
     4741 cgagcctgtt gaaaacctta taaaaattat tcatttaagg ctgcttgcaa cgcaggcaaa
     4801 aattacgctg attagagaaa cttccgacaa cataagaatt tatatgccct atacaaaagc
     4861 agagtggaca attattgcgt ctcgtcttga tagaaatatt acaaaatata taaaatatac
     4921 aatagctcca aagtcgtgcc gggagggtaa ttccatactt cttttcaaca acggtatact
     4981 tagctttaaa gaagtgttta acatattggc tgatttattc tattatataa ataaaataac
     5041 ttacgaatat aataattagc aatgaggagt ataaaaatga agaaactgaa attattcgca
     5101 acagtacttg cggcatctgc cacactgatg atttgcggat gtacaaacca taatgcaata
     5161 gttaccgtaa acggtgacgc aattacaaaa gctcaatacg aaaaagcctt tgatgctgtt
     5221 gctgacaact cgatgtttgc tcaaatgggc attgatttaa agaaagaccc caacagtttt
     5281 cttcacctta tgataaaaga cagagttgtt aacgagcttg ttgttaaaaa actcttggat
     5341 caggaaataa aaagaagaca cataaaagta tctaaagctg acatggatgc tcaattgaaa
     5401 tctattatcg acaaagtcgg ctctaaagaa aagtttaacg aactgttgaa acaaaacggt
     5461 gtttcctccg ctcaattcaa aaaagatttg acagacgaag ttaaaatcca aaaactcgtt
     5521 gatactcttg cagtagttac agtaagcgat aaagacgcaa tgaaatttta caaagataat
     5581 caagacaaat tcaaaaatcc tgacaaagta agagcttctc atattcttgt cagcgctaac
     5641 cctgaggaat taaaagcaaa aatcgcttct tccgcacagg gcaaatcaat gacagaagac
     5701 cagcttaaag cagaagttga caaacaaatg gctgctcaaa aagctaaagc tgaaaaactc
     5761 cttgcagaag taaaaaaaga cacaaaatca tttgcaaaag ttgctaaaga aaactctgac
     5821 gatacacaaa gcgccaaaca aggcggtgat ttaggcttct tcggcaaaga agaaatggtt
     5881 gagccattct caaaagctgc tttttctatg aaacctaata cattaagcgg tgttgttcaa
     5941 actccttacg gttatcacat tatccttgtt acagacagag ttaaagcagg tattgagccg
     6001 tttgataatg ttaaagctga aatcaaagat ttcttaacaa atcaggaaaa agttaaaacc
     6061 cttcagcagt ttgttgatac attgaaaaac aacgcaaaaa tcgaatacaa tgacccgagc
     6121 ttcaacccgg cagagattca aaaagcgttg aaagaacaat caaaaaacaa tcccgcgttg
     6181 atggaaggcc caaagtccgc taaggaatag tcttacttga aggaataaga tatgaataaa
     6241 actctaaaaa acaaattgtt cggcttaatc ggcaagttta acgaatcaaa aatacttgtt
     6301 gtcggtgaca taatccttga tgaatatctc tggggcatgg caaaccgaaa atcgcccgaa
     6361 gctcctgtgc ctatacttga agtgaaaaga aagacttatc ttctgggcgg tgcagccaac
     6421 gttgccaaca acattgcagc tatgggtgcc aaggctatac ttatgggggt tattggtgat
     6481 gacctttata gcggtgttnn nnnnnnnnnn nnnnnnnnnn nctgaaagat aaaacacgcc
     6541 ccacaacagt taaaacaagg ctgattgcgc agaataacaa acaccttgca cgtgtggaca
     6601 atgagtcttt agaccctgtg gcaaaagata tttcaaaagc catatttgct aatattgaaa
     6661 aggttattga cgaagttgat ttgattgttc tttcagatta cataatcagc gttttgactc
     6721 cttctttgat aaaagatatt gtaaaactgg ctaaccgcca tgataaaaca gttgtcatgg
     6781 accctaaagg cagtgatttt tcaaaatatc agggtgtgga tgttcttgtt cccaacatgg
     6841 atgaagcgct tattgcaaca aaatcttcga gaacaaaacc tgtgaaaaag atagcagaag
     6901 ctttacgtaa gattgctgat aaagtgatta ttacaagaag cgccaacggt gtttattact
     6961 atgnnnnnnn nnnnnnatct ggagtctttt tctacagagg ttgttgatgc tacaggtgca
     7021 ggcggttcgt ttgttgcaat gcttgctctg gctcttgcgg gttctgattt taactatgaa
     7081 gaggctattg agctcgcaaa ctacgctgct gctgcggctg taagaaaagt cggtactttt
     7141 gcaattaaac ccgttcagtt aaaagaaatt atcgaagttg catacaacaa tgcaaaccag
     7201 cagggggcgt caaaataatg ggacaaattg ttaaaagaga agacctcccg cagctgttaa
     7261 atgatttaaa aactcaggga aaaaccgttg ttaccacaaa cggatgcttt gatattctcc
     7321 atgtcgggca tgtgcgttat cttcaaaaaa caaaaacttt tgcagacaag atgatagttt
     7381 gtctcaattc cgatgtttca gtaaagaaaa tcaaagggcc ggatcgtccc attaacaatg
     7441 aaaacgacag agccgagatt ctttgtgcgc tggcgtgtgt ggattatgtt gttttgtttg
     7501 atgaatcttc acccgagggg cttttgggcg aaataaaacc cgatgtgcat acaaaaggtg
     7561 ctgattatac cctggaaact cttccggagg caaagataat ccttgctaat ggaggcagag
     7621 tagagtttat cagttttgtt gaaggaaaat ccacaacaaa tgtaatcaaa aaaatcggtg
     7681 cacagggtat ttgtaaatag attgataata aatattatta ttaccccagt tcctgaatgc
     7741 agtattcgtt tatagtatct ttacaaggct tttcaaaacc tgcaagagta tttaaaaagt
     7801 gggttaaaag aatgctcaca tactttggcg gtagatccga aaggtctatt acaaactcgt
     7861 ttatgcctat ctgttcaagc tttggaacat attcatacat gtgcaaaatg taatcctgga
     7921 acatgtgcat tctgcaaaaa ccatctacta caaacgggag tacttttttc aaagacgggt
     7981 ctttaagcgc gtaattcccg ttgtgacagg gtgctttgca tgacaaacgt gatacaatcg
     8041 cgctgtcatt gttcaaaggg cacaatccaa gtgatggaac ccttatgttg cctgcaatag
     8101 tgagctttct gttgggtata aggtttttga ttttttttat gcagtttttg atgtttatac
     8161 tcttttcaaa agtgctgaaa tccacggtgt ctattggatg tagattgttt aaacatttta
     8221 tggacatgct gtttaaaagg tttattccct gtccgatttc cacaggtatg cggtgaagct
     8281 cgtcatcgtt gatgaaggcc cacaagtagc caatgttgtt gataatgatt gacgatggaa
     8341 cgggctctgt cagacaaagg ttttttacat attcatacac cctgtcaaaa tcacgctcaa
     8401 taagaatcct cggcgtgctt agctggagtt ttattccgta attaaaacaa aactttttaa
     8461 cctttgtaat tatttcatta aaactgcttt ttgataaatc agctgtgttt aagatttctc
     8521 cgtattcgat actgtaaata gggttgaaac ccagttttgc gcagaatttc tttatttcgt
     8581 ttatctgccc tatcgatgaa agccttaaat taatacgagg aatattgaga gtgctgtagt
     8641 caaaatcttt tttcaatctc gggcgtctgt tttcccattc aaatttttga atgtttctgg
     8701 aaaatttgaa gtcagacccc tgcgcgctca tcatttcgcc cgaaaagtgg tttgtnnnnn
     8761 nnnnnnnaag gcagtttctg gtttttaaag accttaggtt ttgccagaat tttttcaaca
     8821 agctctatgc cttcaagtat ttcttttgat gttgcaaatt tccctttgat aacaacggaa
     8881 tctattgcat tgagtttttt tatatcctcc gcacaccagg gtaaattgtc agaatctatt
     8941 gcaagcgaga tgtttttgta ctttttaatc tttgcaatat ttttgaggta aatctcttct
     9001 gttattatca cctgatcaac cttatggaac atatttacaa aatcaatacc cgcaaggttg
     9061 tgaatgtcaa agtaagaatc cattatcacc ttaaatggta aagaatgagt tttgatagct
     9121 tctaaaatag caaaactgtt aatgaggatt ccatcgattt ttgtttgttt aagaaatgta
     9181 atgaattttt ttatctcgat taaatcggat tctgttatat tatgcttgaa attgacgtat
     9241 attttgcagt tatttttgtg agcagtttct ataaatttgt taacatattc aaaattattt
     9301 tccaggaatt tgtggtgata aacataaaaa ctgcggcatt ttacatgggg tatgaaatct
     9361 tcaatatcct cgggcttttt tacgggtgct gtaagaataa tattgctcat ttttttatta
     9421 taatcgtttt ttatacaaaa agaagtataa tgtaactgat tgtgaaaaaa tttattattt
     9481 gcctaaattt caatactgta ataaaattat attaaaatcg gctgtttgta tgttatggaa
     9541 caaaaaaagt cgtattaaaa ttggattaat gttacaaagt agtatgaaga gagtgtaaat
     9601 gtttggagaa ttagacgatt cggatatata tgaaaacggc cctaacggcg gttttgataa
     9661 taatgccgat gccaattcgg gatattccta cgggaatagc gatgatacat catcagatga
     9721 ttttttggat atgagttctt atgaagaacc tnnaaccttc atcctcatca aattacggac
     9781 aagaaacagg cggtgtgctt ggcagcggtg catataatgt gcctccgcaa caaaatataa
     9841 acacgcagag taatgaagcg caaggagatt ttatccaggg cgctgctcct tctcaacaac
     9901 cgcctaaaaa aagctcaagc ctgatttata tcttactgct cgggcttgtt tttattgctg
     9961 cggccggaat gttcttttat aagaagaata tggctcaaag cgaagcacct gctcaggatc
    10021 aggcaatggg tgattatttt tacgatcaaa ctgcggctga tgctccaaaa ccggcagctg
    10081 aggaatctgc tcccgctggc acggcaacaa tagatgttga tctggcaaac ggagcggctg
    10141 ttgataaagt tgcagataaa aatgcaccgg cagctgtaaa agaagaccct gaaaaagcaa
    10201 gacttgaaaa aatggaaaaa gagggcaaag agctaaacgc tgttgaaaaa gctttgctga
    10261 aaaagaaaaa ggatgaagca aaagaaaacc aggttacatt aagtgcaaga ccggttatta
    10321 ttcctgtatc ggcggnnnnn nnnnnnnnnn nnnnnnnngc taacaaacct aaatttgata
    10381 ttattgctcc tccgcttgag atcccggcgg cagatcctgt tgttgaagaa gtaatcgaaa
    10441 caaaaatatc aggtattatg tacgacggct caagaccatc tgcaattgtt aatattggcg
    10501 gtacagacca tcttgttcat aaaggcgatg ctgttaacgg atgcaaaata ctggatatta
    10561 caaaaaatac agttgttatc aaatacaaat caaatattta tcaggcaagc gttggccaaa
    10621 ctctaacaga aggtgtaaac ctcaaccctg tgtctaacat tgccaaacaa ttcggcggag
    10681 cttattcaaa aactccaaag ggtacaattc aatttaacaa ataataatta ataggagtca
    10741 tcaataaatg tttaatgaca gaaaacaaaa acagacagga aagttcgtat tgcccgcagt
    10801 gggtgcgctc acgcttgcaa tggctgtaac tttcggatat gcgacagttg cgcaggcgca
    10861 gatgcaggct tcgattacaa aacctgcttt aagaacagaa tataaaagtt ccggttctat
    10921 ttcgttggac aattccattg attggaacaa cggaaaccgt aaaatcagtg tttctttgag
    10981 agattctgat ttaaaacaaa cattgagaat gattgccgat aaggcaggac ttaacatcat
    11041 tttccacagc tctgtaggcg gaacaattac attagatttg gttaatgtaa cgcttaatga
    11101 tgcatttaaa atgattatgc aggcaagtga tttgtctttc tttatcgata aaggcactct
    11161 tgttgttatg acaaaagaag caagtctgtc atctgatatc ggtaaacaaa atatgatgac
    11221 tatccctgta aaatatgctg actcttcaaa agttgcagaa tttttgaaca gcaacgtatt
    11281 ctctacaaac agacctggtc tttctaacaa caaaattgtt gttacaaacc ctgtaacaaa
    11341 cgagttgatt atattcggta cacaaaacga ctataaaatg gctcaaaaaa ttgtttctaa
    11401 attagacgtt gcaccaaaaa caatttctta cagagttaac cacactactc ctaaagaaat
    11461 ggctactttg atttgtcaat cattgttccc taacgctaca atgggcggtg ctactaccgg
    11521 caaaacaggc ggttccagcg catcatcagg tgcttctgca acaggcggtt ctgcaacagg
    11581 tggagcttca tcgttgggtt ctggcagctc aggttccagc agcggatctt ctttaggttc
    11641 gtcttcatca tcaggttcat caggctcttc aagcaattca tctaaagaca ttgctcttgg
    11701 tgaaggaaaa gtggcttgta tgattaaagg tgatgtttct gcaaactctt taaaatcact
    11761 ttcaggaaca tctttaacag ttacatattt ccctcaaaag ggtacaatca atatcactgg
    11821 cggttctgat tctcaagctg aaatgattaa agacttcatt aaagcaaacg ataaaaaaca
    11881 accgcaagca tatgtagaaa tgcaaatcgt tgagttgtca gaaaacggtt caaaagattt
    11941 ccaaaacact tggacattgt tgactccgtt cttctccggc agatttgacg gtaacagcgg
    12001 tttgaccccg tacaataacg gttcacaaag tgcgcctatc ttctttacag gcgggccttt
    12061 caataccgta acaggttcaa cttcttctgt tgatggaaac ggtaatacaa caaccagcga
    12121 tgttgttacc gaatacttta gatatcacgg taaaaatact gttgcatgga cagttaacta
    12181 ccttattaaa aatggtaaag gcagattgct tgctaacccg aaagttatgg ttacaaacgg
    12241 aaaagaatct gttattgact tgacatcaga ctatatcaaa acaacagacg aagaaatcct
    12301 gacatcaggc cttggcacaa gtgctgctgg tgtatccaga acatatgaac tcggtgaaga
    12361 tagcggtatc tccgttcacc tcacaccatt catcagccct gacggatatg ttactttgaa
    12421 tttgtcacct aattatgcaa ctatcaaaga acaggttatg tcaccaagct cttctggtaa
    12481 aggtaatatt attgcggcaa ctcttcttca aagaagaaac ctcgagttgt ctaacataag
    12541 aatcaaagac ggcgaaactc ttgttttggg tggtttgatt caagaagaag aacgcaaatc
    12601 tgttgctaaa cttcctatcc ttggtgatat cccgtatatc ggttcactgt tcagaagcac
    12661 aactacttct aacactaaaa atgagcttgt aattatgatt acacctcaca tcatcaaaga
    12721 tacagaagac gttgcatctg aaagcgaaaa cttgtaatta ttttattctg ccggtgtgcc
    12781 ctatgcaggg atatgccggc agatataata aattaaagct tctccataac ttcagtattt
    12841 aaacaataag catgtgaaac tcaaaagata tgaatatcga aacagtaaat aaaatcaaat
    12901 caaacataaa cggtaaattt gccgaaatat ttacaaaaga agaccttctt gaacataagt
    12961 ttattcctat taacaaacag gcgggttttt tctttattgt tacaaaagaa ggcacaaaca
    13021 agtctgagct ttcagagttt attgctgtta aggattctga tacattaaaa tttatatctc
    13081 ttgatgagga aggttttaac agcttgttcg attattatct gtcaaccttt taccccgaag
    13141 atacgcaaag tgttgtgatt gaacaagaag ttgagccagt acagcaggaa gaaaacccta
    13201 ctgcacagca acaggttcct ccagcacccc ctgttcataa tgaaggacag ggcaaaaaaa
    13261 gaattggtga aatcttaatt gaaaacggtg agttaacaga agcacagctt gttgaagcat
    13321 taacccagtg caaaaaaaca ggcactccaa ttggttctat gcttgtacaa atgggattta
    13381 tcactgttga ccaattaaaa gatgctttgt cagcacagca agggtaccag cacgttactg
    13441 cacaacaatt aaatatttca gaaggtgtta taaaaatcct tcctgaagac tttataagag
    13501 aaaacaagct tgttccttta gcttctgacg gcagattcct cgacattggt atggttaacc
    13561 caaacaacaa aaaagcgctg aacgaagttg tttaccttac aggccttcgt ccaagagttc
    13621 ttttgatgag ctatatggaa ttcaaaagct gtatgaccaa atactttggc cgtgcaagaa
    13681 aagaaaccaa agaaatcatc agaaaaatag aacaggaagc tcttgagttt gaggtagaag
    13741 aatcactctg ggaacaggta gaaagagagc ttgaagatac ttcgggttct gttgcaaact
    13801 ttgctacaaa aattattact gatgctatcg atttgaaagc atccgatatt cacatcgagc
    13861 caagactcga ttgctatacg gtaagataca gaatcgacgg tattttaaga cgtgtgcttg
    13921 acctgcctaa caaggtagaa tcttctttga ttgctcgttt taaagttctt tcgagaatga
    13981 acattgccga gcacagaaga acacaagacg gtacattcac cgttaaatac aacggaatat
    14041 catatgactt ccgtatcaat actttgcctg ttgctggtaa agaaaagatg gttatccgta
    14101 tccttgcacc tgctgcaagt attaaaaccg aagacagagt aatcaaactt gccggcggta
    14161 cggaagaaga ccttgaaaga attaacaaaa tggtagctgc accaaacggt atcattcttg
    14221 cagttggtcc tacaggttca ggtaaaacaa ctactttgta ttctgtatta aaaagtttga
    14281 ataacgaagg cgtaaatatc acgacacttg aagaccctgt cgaaatcaag attgacggtc
    14341 ttaaccaatc acaaatcaac cccaaagcag gtattacttt tgccagctgt atgaaggcta
    14401 tcttaagaca agaccctgac attatcctta tcggtgagat tcgtgacttc gaaactctgg
    14461 aaacagcagt tgcagctgct ttgacaggtc accttgtgtt gtcaacactt cacacaaact
    14521 ctgctgctgc aacaattaca cgtttgattc agatgggggc agctgattat cttatttctt
    14581 ccactttaac aggtatcatt gctcaacgtc tcgtaagacg tctgtgccct aagtgtaagg
    14641 aagcgtataa cccgacatta gaagaagcaa aactggttgt tgcaaaccct gaagagcaaa
    14701 gagagtttat gaaacgtaca atatacaggc caaaaggctg ttttgactgc aacaacgaag
    14761 gctataaagg ccgtattggc tgctatgagg taatgctcat taataaagaa atcaaaaaaa
    14821 tgattgccca ctcagcacac gacgtagaaa ttgaagaagc tgctgtaggt atgggaatga
    14881 aaaccttgca ggcttcatgc cttggacaca ttctgagagg cgaaacaact ataacagagt
    14941 ttgtccgtgt acttggtccg gtaactgaat aatacaggta taagaaaata tgacaatatt
    15001 taactatata gcattaagaa atcaatcaga aattgttaac ggtaaaatcg aagccgaaga
    15061 cataaaagca gcacgtgaag cgataagaaa ccttggcctt gtgcctacaa aagtttttgg
    15121 cgaagacaaa aaagcctctg ctccaaaagt tagattgagc cctttatcct tgcaagagct
    15181 gatagacttt acaggtactt ttagaacttt gatatctaca ggtgtaccta ttattgaagg
    15241 tcttgttttc ttggaaaaag atgctgtatc ttcacgtatt cgtcttcttg caagagaaat
    15301 cagaaaacag gttattgcag gttctacttt tgctgatact gttgctaaat atcaggaaat
    15361 attcggtagt atttacgttg gtttgacaaa agcgggtgaa gattccgggg aaatggaaaa
    15421 aacactcgac cgtttggcag aattgcttaa aaaacaggct gcaatcaagg gcagagttat
    15481 tggtactttg atttatccgt gctttgtaat cgttcttgcc gcaattgttg ttactgtcat
    15541 gcttatgttc gtattcccgg cgtttaaaga aatgtttgat caatcaggtg caaagctgcc
    15601 tatttttacg cagatttgta ttgaccttgg tgagttttta aaagcttact ggtatttgac
    15661 attactggct cctgttgcta ttggggctct tatttatacc gcatttaaaa atcctgtttc
    15721 aagaaggatt ttggatgatg ttttcttaaa attgcctctg gttggcgaca tgcttaaata
    15781 tgccaacttt tcaaacttta ttaccgtaat gtttgttgcg tacgaagcgg gtattcctat
    15841 tgttgactgt ctgcatttgg gcaaccttac aattgacaac agaacaatta aaaataaaat
    15901 tacagaagct attaataaag ttcaacaggg tactcacctt tctaccgcac tcagggcagc
    15961 taatattatc ccctctatgg tgctgtttat gattgcaaca ggtgagcaaa ccggtaaact
    16021 tggtgaattg cttaatcaaa gtgtaatctt tttggataaa aagcttgatg atattatcga
    16081 tgcaatgaca aaaatgattg aacctttgat gcttattgtt atcggtagta tagtaatgtt
    16141 cctggcattg gcgttgtact taccgttgtt ccaatcttat caattatagt agtattacaa
    16201 ggagtaaaaa tggcagaaga ttttgaacat atagaaccat tcgaaataga agaattgggt
    16261 gacaacgatt ttacaaacgg tgtctggtca gaacgcgtac ttgttattac gcaggattat
    16321 gaaataaaag gctctgtatt tatgcctaaa attggtaaaa gaagccgtgt gctctctgat
    16381 atccttaacg gcaaaaagcg atttgttgct atcaaagact gtgaagtatc ttacagactt
    16441 atgccaaacc gcagaacaga gtttcatgat tttgtacaat taaatatcaa ttcaattatt
    16501 attcttcgcc ctacaagtga ttctgaataa tcagggtgtt acaggcttta ataaggcgga
    16561 gacgtgttgt ggagaaaaaa agtatacaac tgttatcaga gcttacttgt gcagattttg
    16621 tagcattctg caaaacaaac atcatcccac accttgtaac attagaaaat gaacgtgtcc
    16681 aaaaattgaa caaagtgcat aattttaata aaatatgcac ttttctgatg ctttttattg
    16741 tcacaggttt ctgtattgct tttatttgcg tgtttctttc aggtaatgat tcgtctaagc
    16801 cgatggggaa gatttcaata gccttgtctg gcatggtgat gatagcagtt tgttctgcag
    16861 ttattattga atctaaaata gaaactttga tatctccaat gtttcaagag tttaaatcga
    16921 gtgtgtatac gcttttattt tcatactttg gtcagtttaa atattatcct aaagagattc
    16981 ctttgtctta tcctgtttat gactcagcct tgactatggt aaaggggttg aaactgtttg
    17041 ataattttaa catatactct atagatgatt gtataaccgg tgtttacaat ggtttaaact
    17101 taagaatatt agatctggat ttgcaaaaag gagaaggtag acaaaaagac actatttttg
    17161 acggagtgct tttagaatgt aactgcaata aaaaatttca ctctacaacg attgtgagat
    17221 taaataaaga tgttgtgcac tcaccttggc aatcaggagc aatgaatcgt gttgctttgg
    17281 aagacccggt gtttgaaaag gagtttaatg tttattcaac agatcagaca gaatcaagat
    17341 atattcttac agcagctttt atgaacagac ttttaaaagc tcaaaaaaaa cttggaatac
    17401 ctttgacttg ttcatttgaa aatggaaaaa tgtatgtggc tattcacaac aacaaagatt
    17461 ggtttgacat agattttgta aatgacagct ttacagatat cagaacgttt caaaaaatcc
    17521 ttatcgatct tgtggaagtg ctctctatta ttgatacgtt gaacgcagat tccaatatag
    17581 gtatgtaata aaattttttg aataaaatgc ttgatttcaa attttgtcca tggtgtaata
    17641 tatttactgg ctgaaaagct atgggctgct agctcaggtg gttagagcgc acgcctgata
    17701 agcgtgaggt cggtggttcg agtccactgc ggcccaccat ttaagataag agaccgtgag
    17761 gtctcttttt ttgttttatt ttttgcaaaa tagggtatta ttaaaaaatg caaagcactg
    17821 aagaatttag aaaaaatttt gattcaatat attacaaaaa aattgtcggt ttgctaaaac
    17881 cctttgagca aaatagactt tttactctgc ggctttgtat tgttttgatt attatcggat
    17941 tgttaanntc tattgatgta tattgtattg ccaatcaaga tactcttttt cctcttttaa
    18001 gcactaaaca gatagaatat ttgctttcta tgattatgat ggtgggcata ttagttttat
    18061 gcagtcctgt ttacttggca aaagactttg aacaaactct aaaaagagaa gttatgccgg
    18121 agattttaaa aaacttaaaa acttttaaat ggagaaccaa aagttctatt tctgatggat
    18181 atataaactt ttctgattta tttgcggatt ataacagaag atttgatgat gataactttt
    18241 ctggaaaata taaaggtgta acaataaata tctgtgaaac tgaacttggc aaaaaatccg
    18301 gaagcggaaa aaactcttca tatatagtgc gttttaaagg ggtacnnaac ctgcttcctg
    18361 agcgagaatt caaatcaaca atactgataa aaaaaagagg cttgctaaac tttgtgcccg
    18421 aaggactcca agaagtagac ctggaagatg tagagtttga aaaacgtttt aatgtatatg
    18481 gtgatgacca gatagagacc agatacgtgc ttactactgc gtttatggac cgatttaaaa
    18541 atattgcatt tgttttcaaa tccgataaaa ttgaagcgtc gataaaagac accggtatat
    18601 taattgcaat aactgttaaa agagaccttt ttaaagttgc taagctatat agacctattt
    18661 gtgattacag ccaatttaaa caaatgatag acgagttttc gtcaatactg gaattgatag
    18721 aagagcttaa acttaatcag aatataggtt tgtaaacttt tgtgtaactg ttagcaattt
    18781 ctttgtgtat gtatacttta tatatttaag agatatggat atgcaatttc aaaaggagtt
    18841 gtcaataaaa agagaatgag taatctgctg tcatcactaa aaattatcac caatgactat
    18901 attgtcgcca aagacgacac aacaaagatt gtaaaaaaat ttattccgca agaagcagtc
    18961 aaaaaactgt cggaatctaa caacaaaatt aaaatggagc gtgaaatttt gcataaaaaa
    19021 gatgcagaag aacaagctgc acttgaaaaa caaacaaaaa taattacaaa tattataaca
    19081 aatgatccgg cagctcctaa aaatctagat aatcagcaaa tggcaaagtg gattattgat
    19141 gcagctaaag aattcaacgt agacccgctt gttataacaa gtattgctca acaggaaact
    19201 cattttactc aaaatgtgcc aacagcaaat ggcagtggca ttatgcaatt gaccggcatc
    19261 actattaagg atatgtattt gcgctctaat gtttatgaca aggcgctttt accttatcta
    19321 aaaaaatata aaaatccgga acaattaaaa gcagcgatga gaaaagaccc tgaactaaat
    19381 ataaaacttg gtacagcgct ttacaagcaa aaattgaaac aagcaaaagg cgatgaaaag
    19441 agagccttta tgaattataa tggcagtaat ataaaacaaa aatattccaa cgacgtatat
    19501 gccagagttt taaacgccag acaacaatca ggatttgttt cagaagcata agcttgacat
    19561 ttgtgataca atataaacac aaatagtcgg gtgtgaaaat ggcaaagaag ttatcaattg
    19621 catttatctg gcatatgcat cagcctgttt acaagtctga tcaaaacggc atttatctta
    19681 tgccgtgggt tagattgcga gcagtcaaag attatcttga tatgctgctt gtgatggata
    19741 aatttccggg cttaaaactc aattttaacc ttgttcctat gctggtttct tccatttatg
    19801 actatggata caacggtgca cacgatattt tttcaagact tactattaca cctgttgagg
    19861 atttgtctga tgatgaaaag gaatttatcc tgaatcattt ttttgatgca aattatcaaa
    19921 atatggtttt gcccaatacc gagtataaaa aattgtatga caagcgtttt caaaacgcag
    19981 atcttggtat aaatgatttt tcgcctcagg aatattccga cataatggcg tggttcaatc
    20041 ttatatggtt tgaccccatg tttagagaaa acgaggatat caaagccctc tttgccaaga
    20101 aaaatggcga gtttactctt tctgacaggg taaaaattat tgatctgcaa agagagatta
    20161 ttaaaaaaat tatccctgca tacaaacagt ttcaagatga cggaaaaata gaaatatcaa
    20221 ctagcccgta ttttcacccg ataatgccgg ttctgcttga tagaaatgat gtggttgaag
    20281 ccaatcccaa tgcggactat cccgagcttg aatctgatat gtcagaagat gcagagctca
    20341 atgttaaaag agcacttgat aaatttgaag aaatttttgg caaacgtcca aacggcatgt
    20401 ggccttcaga acaatgtatc agcgaaaaaa cactgcaatt gtttatgaaa atgggtctta
    20461 aatggacaat ttccgacgaa ggcgtgctcg agcaaacact taaaaaagag tttgtaagag
    20521 attttagagg atatcttgaa gacccttatg agttatgcca cagctataga tacaaccacg
    20581 acggcaaaca aatcggacta ctgtttcgag atgcagtttt gcctaacctt atcggttttg
    20641 agtacccgca tcacgaccct gttaaggcag ccaacgacct gtatgacaga ataaaaacaa
    20701 aacaaaaaaa acttgctggt tctcctgaca aaatgcacct tttgacaata gcaatggatg
    20761 gtgaaaactg ttgggaaaac tatcaaaatg acggtcacga atttttggat actctttata
    20821 aacttattca agatgacgaa gaccttgaaa cagtcagggt atctgattat attgatgctg
    20881 ttaatcagct cgattggact gggacaccat ttgagcttga ccatgttcgg ccaggttcgt
    20941 ggattaacag agattttctt ttatggattg gtgaacccac caaaaacctt gcgtggctct
    21001 acatggataa agcccgttgc gacctcaagg aatatgaagc acaacaccct gatgacccca
    21061 ggctgccact tgcatgggaa gaattatata taagccagag tagtgactgg tactggtggt
    21121 atggagaacc aaatgattcc ggacaggatg atatatttga ccaccttttt agagagcatt
    21181 taagaaatat atataaactc ataaaacaac ctgtaccgga gtatctggaa acaccgctgg
    21241 cagaattttt agaggcacgc tcaaggtatc caaaagctgc atttgacagt tttgagctca
    21301 acggtaaaga tgcagatgca aaatgggatg taggcggctg tattgatatc cctgcacctc
    21361 ctacaatgca ggaaaaacga ttctttaata aaatttgttt tggttatgac acggataatc
    21421 tttaccttcg ttttgatata aacaagttta ttcttgataa agaaaacggg ttcaaggatt
    21481 ttaaccagat ttatatttat tttaaaaaca gaacagaaac atctctgcat agtgctccaa
    21541 tcaggactgt caataaaacg gaaacaataa ttcctctttt aagagaacct tacaactgtg
    21601 aagttaaact gacattgttt aagaatttcc atttcaatgc acaacttgcc cacgcaacac
    21661 gtgataatct ctgggtgctg cagctcaaaa acggtattga acacgttttt gaagattaca
    21721 tggaggttaa aatcccgttt gatgatttgc gtgttaatga aaannggaat ttttcgttat
    21781 acagggacct ttaggcattg ttgatgattt ctaccctcaa aactcgcttt tgccggttgt
    21841 tcgcccgcaa aaagtttttg cttaaattct aaatttgata cctaatactg ttataatttt
    21901 atactttctt gcattttctc tgtaattttt aacagaaaat atgttttcaa taaagttgtt
    21961 tgaatttttt atctttttta aaagtttttt atacatttct tttgaaagcg tagcttgtgc
    22021 tttattaaaa tattcttcca tattttcgtc aggtannnnn nnnngataat actgcatcaa
    22081 atttaaaatt atcgaattct tcttttaaag tttcgtattt atttctctgt attatattat
    22141 tttttatgct ttcaatatta tcaaatatgc acatatttct tgctgactta gtatttgtgc
    22201 aagagcctat acgctgtctg tagtgatgaa atgcattgtc acaccagcta attttttgag
    22261 cacacnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnntta gatcatttga taatataaat
    22321 tcttttttga aaacaaatcc attaacgcat gcaaatatcc ttaactggcc tttttgcata
    22381 tcactgatgt tgaaacactt atcttcactc aatgtatagc cggtaatttt tttaatcttt
    22441 gtcttcatag actttggtgt ggattttccg gtcaaatctt cttcaatcat tgagttacaa
    22501 aaaacaaaat cagaatcaaa tttttagcgg atttgtacaa tttttcaaac atatcaacat
    22561 caacccaatc atcagggtca ataaaggtaa tgtactcacc gtttgcaatt tttaatccgt
    22621 tgtttcttgc aattccctgt ccttgatttt cttgcgaaat tatttttatc cttgcatctt
    22681 tttgtgcata ttcttcaagg acctgtaaag agttatccaa agagccgtca ttgacgcaaa
    22741 taatttctat atcatccatg gtctgattaa taatgctgtc aagacaatct tttatgtatt
    22801 gttcaacatt atacacgggt aaaattgcgc tgatttttgt catactttct cctagagggc
    22861 cggaagggaa atattaaaag agctctttta atttatcttc aaagcttgtt ttatgatagt
    22921 taatttttga tgaaataaca ggatgtctgt attctgtctt gtttatagaa cgtgcatcca
    22981 caatcggaga tggaggcatt attgtccatt tgtatagagc tgtggacatt ctacggaaga
    23041 atttttgcag ccattcgagt ttttgttctt tgcttattgg agtgccctgc tgtttcatgt
    23101 gtatttcatg caaaaactct gcattcatca tatcacaaat agtttgttgt aaattttcta
    23161 cacgccatat cacttcatcc aaaaactcat atggcataag agcttcttct gcaagaagag
    23221 gcttgcctgt tttagggttg atagcaagct cagcccccgg gcgtttttgt ataatacttt
    23281 ccggtattgc attttttatt ttgcggttat tattcatcca tcttgcaagc gcaaacagtt
    23341 ttgtttttga cacatcagca agaggtgaaa agccacctga catatcaccg ttgattgttg
    23401 cgtatcccat atataattcg gatttatcgg atgtggcaat gggcaggcaa gagccaaatt
    23461 cgtttgctat gccccatagt atcaatgcac gcgagcgagc ctgaatgttg tcattggtaa
    23521 agctttcttt aaaacggttg tcccagtgtt tttcaattgt tgagaatact tcgtcaaatt
    23581 ttgaacgagt agaatcgtac atgtctttta tggaaatttc cgtaaaatta atgccaaggt
    23641 tgtctgccaa ctcttttgca tcgtttttgc tttccgcact ggttatcttt gagggcatac
    23701 tgataccgaa aacattttgt gcaccaagtg catcggccag cagcaccgca cttacggtag
    23761 agtcaagccc gccggaaagc ccgagcactg cgcgtttgaa cccggttttg ttaaagtaat
    23821 ctcttataga ttggactatt gtcagatagg ttctttctaa atccggctca tggtcaagag
    23881 taaaagcttt ttgtgatgtt aatgtttttt caagcccctt gggtaaaggg ttgacatctc
    23941 cgccttgtgt gggggaaaca acaaaaaact gttcctgata tgattttgcc attgcaataa
    24001 gattgccctg tgcgtcatat gctcttgatg ctccttcaaa agacatgcac tctccggagc
    24061 ctgtttggtt tacataaact attggtgttt tgtgtttttt tgcagcaaaa cccagcatgt
    24121 tatgttttag ctgttctttt tttgcacgag tgatagaagc agaacagttg attaaatagt
    24181 cggggtgctg ctctttaact actgtttcaa cggggtcaat gctgtataga tttttgtcaa
    24241 aaaagtcaaa atcattccag ccgtcttcgc agataattat acccgctttt ttgttgccga
    24301 tttgtattat tctgtttagg ctttcgaccg gtgaaggctc aaaatgcctg tagtcattaa
    24361 actctgcata gtttggtatt aacgatttgc gaataacacg ctcaattttt ccattgttga
    24421 ttactgcaat cgagttgaaa tactttttgc cggttttttc tttgttgaat tccgcaaaac
    24481 ctataataac ttttgttttg cctttaacct tttgagcaat tgcttcaagc cattcgatat
    24541 tttcttcaac aatcagaggg aatctgtcaa taaaatcacc tattggataa cctattaaat
    24601 acatttccgg aaatacaatt gtgtctacat caagtctttg agcccatttt atccattgaa
    24661 aggccttttt tgcatttcct tttatgtctc cggatgtagg atttgtctgt gcaagaacaa
    24721 nntcttccgg cagcaatggt tttaattctt ttgcaatttt gtctttttct tcttctgaca
    24781 ggttgttata ttgcaggtcg ttatctattt gttgtgttaa tttataaatc ttttcttcca
    24841 tatttttatt gtatatgaaa atcaacaaaa tgaaaaagga gtaacttaac attactcctt
    24901 tttttataaa tttattttgt taaagactag tcataaacat agttgattaa agcagcttct
    24961 cttgcttttt taactgcttt agcaagcatt ctctggtgct ctgcacaagt gcctgtaatt
    25021 cttctgggga gaattttgcc tgcttctgtt aaatatcttc tgattttttg agcatcttta
    25081 tagtcgataa cttctacttt atctgcacag aagttgcagc tttttctttt gtttttgtcg
    25141 atttgtggtc ttgccattgt ttttttcctt ttctattgtt ctattgttag tggcttttgc
    25201 gcccaaacta acttaatctt ttaaaacggt atttcgtctt cgccgattaa gtcgtctgag
    25261 aaatcggttt gcccgaattg aactaacgta tcgggcgagt ttttggctgc gggagcagaa
    25321 gctgaagatg agctgcctgc aagtttttcc attgcataag catctatttc cacaattctt
    25381 ttttccgagc cgtcttcatt tttaaccgtg ttgttttgaa gtctgccttc aacaaccact
    25441 ctgtcgcctt tttgtattgt ttcttctaca gttgcggcaa ggttgccttt ggcaataact
    25501 ctaaccaaag tttcttcagt gtcggagata ttcatagcaa atgccgaaat aggcacattg
    25561 ttagacgtaa aacgcttttc cggcgctctg taaactgttc ctgatataac tgcttttgct
    25621 aagctcattt ttaaacctcc ggctttcttg actatgcgct tactttagat tcttccataa
    25681 acattgttct taaaacgttt tcgtttaagc tcaattgtct tttgaattca gttaccttgg
    25741 aaggatctaa ttcaagtttt tgtactacat agtggccgtc tctgaagttt tggatgtcat
    25801 gagcgagttt ttttctgccc attttgtcaa ctgcagttac gtttccgcct aaagatttga
    25861 tgctttcttc gattttagca ataactttat ctgcttcttc cgcatccata ttaggcttga
    25921 tgattgtaag taattcgtat tttctcaatt ttgtgctcct ttatgggttt atacatgtaa
    25981 gagaaaattt aacataaaca aaatacgaat acaaataatt ccgcgctaaa tcttacagat
    26041 gcgtaatatt ttcaagcaaa ttaatttaca ttgttttcta caactccgtc caaaaacgct
    26101 gcaatgttag tcattgttgt gtttaagatt ctgttaatgg cttcttttgt gttgtatgca
    26161 atgtggggtg taataataac atttggcagc tgctgtaaac gggtgtttaa aatagtctgt
    26221 tttaaagcgc attcgttaag acggttaata tcaataaggt aatcagggtc tgaaattgtt
    26281 tcttcacttt ccagaacatc cagtcccgct ccggctattt cttttttgct gattgcgtta
    26341 aaaagagcag aggtttctat taactcacct cttgcggtat ttatcaaaac agcactgttt
    26401 ttcatttttt taaagctttc ttcgttaaac atatgcctgt tatctttggt gagaggtgcg
    26461 tgcaaagaga taaaatctga ttctttcaac agtgtatcaa aatctacgta tttgatacgg
    26521 taattttcga caagctcctg tttttggcta tggtcatagc ccagaatatt catatcaaat
    26581 ccgtatgcaa gtcttgcaaa ttccgagcct attgccccca gccctacaat gccgactgtt
    26641 ttgccgccaa gctcctgacc gataagcgcc tgtggttcaa cgtgcatctc tttataatca
    26701 atataagatt ttgtaatttt tctgcaaaca tcaagcagta gcccgattgc aaactctgca
    26761 acacttttgt ttccgtaatt cggggtattt tcaacaacta tattgtgtgc gttgcaatag
    26821 tcaaggtcaa tatggttaaa acccacagaa cgcagtgcaa taagccttaa gttactgaat
    26881 tgtgccagca cgtcattaga aacacgagag tttgtaaata cggaaatgat ttccgcatct
    26941 ttatattctt ctttaacttc aataatattg ttcagtgagt tggttgtgag atggtagtcg
    27001 tatttgcctt cattattttt tatcaaaaac tctttttcgt cgtcttgcac atcaaaataa
    27061 atgatttttg tcattttaaa aactccgtac ttattaacac ctgtgacaat ataagttatt
    27121 tgtgcgtgct aattaatacg acaatatggc taagaccggt tgactaaatt tatttgtaca
    27181 ggttttcaat ctgacggcta aagtcttggt ttttactgca atagtcctgt ataaatgccg
    27241 aaaatgattt gattcttgaa aacatttctt cggtcataat atgctccatt ctgcacgcgt
    27301 tgagagttga ttcatcttca ctcaaatgca gtatattctt taaaaaaact gacataacct
    27361 cgtgacgctg tagaattttt tttgcttctt tttcaccttc tgcagtaagg gtaatcgggg
    27421 cataaggcgc ataattaatg agtccttttt cacaaaggct gctcaatgcc cctgttacag
    27481 aggctttttt tacatccagc agttttgcaa tgtctgttac ttttgcacag ccgttttttt
    27541 ctgcctcaag gtatattgtt tcaagataat cttcctgact gggtgttagt ttgatcataa
    27601 aaaataatcc tttttttttg attttatcat aatttttgta aaaaaatata aaaaacaacg
    27661 catattttta ttttgagcgg atttaatgga aatatgactt ataaaatcgc ctttggaaat
    27721 atatctttta aaaataatgc acaaatacaa aagccggaga aaaaagacaa tccctcacct
    27781 gttgtgaaga atgcacagcc tcttgcaaaa ccgcctgtgt ctactttgct ggcttatgta
    27841 acatacagag ctgattctaa aaatgccggc gaagtgggtg tgaaattttt taataccctt
    27901 tccgtagaac agatgaaaaa acaatacggt gaattggccc aaaaaactgc tgctgaactt
    27961 gcacaaaggg ccggcaagcc aaatcaggtt ttgaactgga tagaggtttt gccgcagact
    28021 caattaaaaa gattggatga aatatacgca ctggcggatt ctttaaaaca aaatgggtcg
    28081 aaaaaactag gcattatagg tatcggcggt tcgaagcata ctatagaaaa ccttctttct
    28141 ctgaccggaa atgctgacaa agctgtattt ttgtctgcag tagacccgga cagcattgat
    28201 gattttgtca aaaaactcgg cgaccctcaa aaggctgcag tgcttgttgc atcaaagtcc
    28261 ggtacaacgc ttgagccgag tgtggatttt gaagctgtaa gaaaagcact caaagacgat
    28321 tttaaaaact atgtttgtat aaccgacaaa gatgaatcca aaagcaaatt aagacagctc
    28381 gcaaataaaa acggatacaa atgcggaatt atccacgatg aatgcggagg aaggttcggg
    28441 gcctttgatg accataccct cactgcactg gcatattgcg ggatgtcaaa agatgacatg
    28501 aaaaaaatgc tggaagcttc cttaaaagca caaaaacagt ttttatctga tgacattaca
    28561 actaacaaag ctcttcaaag agctgtattc aacgcacatt cagtactaaa tggtaaacaa
    28621 aaccagtatg attattattt ttcagacagg tttgagggca ctgcattgtg gaacacgcag
    28681 atgaaaaaag aatcgcataa gtctttatac aaagtctccg gtgaccttac aggccctgca
    28741 tttttgcaca actctactga agcagacctt gatgagggca atgattcttc atttttcacc
    28801 ttcaacacaa tcaaaaacgc cggcggggaa aaatacaagg cctacaacgc actgataaat
    28861 ggcagtttaa aggcatacag cgaactccat ccggtttcac ttgtcgagtt aaaagacctt
    28921 tctccttcct caataggtga gtttgtggaa ttgaaacatt ttgaagcaat gtacacaggc
    28981 atgatgcttc gagcactaaa atccaaagat tctcacacag aatttaaaca tccggatgtt
    29041 ttgccggagg ttgtacagcc gcatgtgggt atttataaaa aagaggttga aaagattctt
    29101 aaatccaccc cttnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
    29161 nnnnnnnnnn nnnnnnnnnt acatctgcaa tgcgttcgtc atcagagtga tactgtgctc
    29221 tcatttgttc aagctcatct ttatcaaaga attttccgcc gcacaaatag cattcgtcaa
    29281 ttaaaatttc ttgttttgcg ctcacgttat tttttaccat aggtttgtgg cacaacgggc
    29341 attcacggat ttgtgtttta tcaacttttt taaatgtctt acccttgtaa gcttctttta
    29401 agggagtaat gtcttctttt tgttcatcga gtttgttgag ttctctgttg tcaagccata
    29461 atccgccgca tccatccagg cagatatcaa ccataaatcc ttgatcttca agataaactt
    29521 ttttcattat ttggccgcaa gcagggcatt tgataaattc ataattgtct ttcattactc
    29581 ttcctttgca aaattccgta attacctgat tagattatat catcttttag tatttagcca
    29641 atagttcggt atcttgattt tatcggtcat ataaagtatc tttgttatat aaaaatttag
    29701 gggtggtttt atggaagtaa aaaatttttt aaataagcat aaagtcttaa tatcagtaat
    29761 tttaggcctg atagtgattt tttatctggc tttcttattt gttgttccta atgttattaa
    29821 tttaaataat tataaaaaag atatccaaaa gctggtgtct gacacaacaa tgctcaatct
    29881 tgattttgat aacttaaaaa tagtcactac tgcggattta aaagcgggtg tcaatgtaga
    29941 aaatgctgct ctttcttatg ctgacggcaa aaaaattgca tctgtaaaag atgctgaaat
    30001 caaaattgct gttttgccct tgatatttaa aactcttagg nntataagcg cagctaatct
    30061 ggaggcgaat gtcaccttgc aaaaagacgg ccaggtagat attgttcgtc atatggaaaa
    30121 ggttttggca gaaaacagct ccgctgctga tacagatata tcagatgacc tgtcggaaga
    30181 cgaggatttg gatatggaaa tgcaggagtt tcctgtcaaa ttttcttaca aattgcctgt
    30241 tgtgaagatt aacaattatt tgttcgtatt aaatgacgaa aaaaatgcag ctgctctcaa
    30301 tttaaaaggc gacacttttg tgtttgatga agctgtttta aacaaacatt tcagagtcag
    30361 ctcttcagga aaaatccttt tgaacggtaa agaaaacgtt ttgtacaatt tccgtgtaaa
    30421 aacattctgg ccggctgttg cttcttcaca ggacaatgcc tcttccggnn nnnnnagcac
    30481 tgttaactta caatccaaaa gctgatatcg aggctgactt aatattaaaa gagcatttgg
    30541 ggcatacaga tataaacggt tatataaatg ctgacaggct gtctgtaaaa cttaacggca
    30601 aaaagcttcc tgacagttat ttccatctga aatccgacgg gcacaactca gttgtggaat
    30661 cagatatata tgtgggttct gacgaaaaag cggaaataaa cggagtgttt tcacatgctc
    30721 acaatacaaa gattgatatg gcagtaaaat ctgacagaat aagctttgaa agtatcaaag
    30781 agtttgcgct tgctgtttta aattctttaa acatctcaaa tgatatagac tctgttgttg
    30841 caaaaggttt tattaaagct gatttcaaac tcaaaacaga tttgaaaaag ttcgaatcac
    30901 agggttcttt gaatattgtt gacgggttta tttcgcacaa aacagttcct gttaaaattg
    30961 acaaaattaa tgctgacgtg gatctttccg gtaatagcgt aaatataaaa aatgcaattg
    31021 cctatgtaaa cggagaagaa attagggcaa aaggctcaat caaagaacag tcaaatgctg
    31081 ctgtggcaga tatatctgtt tattcggcag gtataaatat ttctcctctg ttcaatgcct
    31141 ttgctcctgt cgaaataaaa aatgcatatt cgctcaaaag cggtattgtt aatttcagct
    31201 ttaatgtaaa aggaaaacta aacgaaatta aacctgtggt tgaagccggt ttaaaaaatg
    31261 cagtgttaaa aacaaaagct cctatacctt tgttaacagt ctcttgcaaa gacgttaaaa
    31321 tttcggcaga tactaaagat ataaaaatca taccgtttga tattcttttg aacaattcaa
    31381 aaatatctgt atccggcgga gtgtatgatt atctcaaaaa aatgaaaata gacataaagg
    31441 ctgacggata tttgcagtca aatgatttga aaaatttgct gccaaaagaa gttgctgctt
    31501 ttaccggtgc aaaaggcaga attcctctgt acgcttttat taaaggtaat gacaaaaaaa
    31561 ttgaatccgg catacaggcc tattctgatg ccaacaatca tttttctcct gttactgtca
    31621 aaaaaatgat tggtaaatca ggactcgtca atatttatgc tgtgctttca ggtgacaagc
    31681 ttttgttaga agacgcttct ttgtatcagt cttctaaaac aacgtttaca aaagattttg
    31741 cgtcaaacaa aaaaggcgca aaaaaagttg caggcataaa cggtgaaata ttagaccttt
    31801 caacagctta tcctgatttg cagcttaatt tctccgttcc tgatgtgctt gtattgtcat
    31861 cagcggttat gcctgatgca aaacttacac tcaggggtga tttgagtgtt tcagggtatc
    31921 ttaataattt atccaacctg ttttataaag gatatttctt tgtaaaagat gtctctgttc
    31981 ctgactttct tacaaaaata caagatgcag atatcgagtt taatgatcag gttattacgg
    32041 caaaaatcca gaatctggat ataaacggta cctcatttaa tattgatgcg gatgcttctt
    32101 ctaaatttac cagtgtgttt ggtataaaaa ccttgaaagt gtctagtgca aactttgatg
    32161 cggacaaact ctttgcagct atggannnnn nnnnnnnntt catcagctgt tggcagctcc
    32221 ggctcatcga gcggacttgt cttgcctgtg aaaattgccg atggtgactt aaacattcaa
    32281 aaattcaaga tgaaacaggc cttcggactc tttgaggctt ctgatataag ttctgatttt
    32341 acgctttata atgatttgtt tactctcaaa aattttaaag cttcggctta tggcggaaat
    32401 gtgacagggc tcatcaaata caatgttgca accacacagg taaatgccaa aatcaacggt
    32461 tcaaaaataa atgcaaatcc ggctgtttca gtctttaccg gattaaaaga ccagattgtt
    32521 ggcaatgctg attttgatgc tgatatcaaa ctcaaagggg caacttatga acagcagatg
    32581 aaatccttaa acggaaaagt taacttttcg ttaaaagatg gacaaatggg aagtctcggc
    32641 agatttgaaa catttttaaa agcggacaac cttttgtcac aaagttttgt ctccacaaaa
    32701 ataggcagcc ttgtttctac agttgctcca tacaatacag gtaaatttgc ttatttaaaa
    32761 ggcgatattg atttgaaaaa cggtattgct tttcttgctc ctgttcaaat gtcaggacct
    32821 catatgtcgc tgcttttgaa tggaaatgtg aatatacttt caatgatttc caatatcgaa
    32881 attctgggct ctttgtcacc ggaagtaact aaatcattgg ggcctgtggc tgatttgtca
    32941 gtggaaaaat ttgcttcgtt tattccaaaa tttggtgcaa aaattgcatc tgcgctgagt
    33001 atgtataacg cagcagcaaa caaatcagag ctggaaaaaa tccctgccct gactcctgaa
    33061 aagacaaata caaagtcatt taaagtgctg ttaaacggaa atcttaacaa tccggcaggt
    33121 gcaataaaac gtttccaatg gcttaatacg cccgaaaaaa tagaagagga acaggctgct
    33181 atagaaaaat ctttgatgcc ttcattgcct gtaacaaaag aagagcttaa agagcaaatt
    33241 aaagaggatg ttaaacaggg tgttacaaat gctctgcaaa ataatgaaaa agttcaggaa
    33301 attcagcaaa acaaagcagt gaaaacactg ggcgaaatct ataagtttta taaaaaatca
    33361 ggcagtacag aaacacagga ataataggag attacagcca taaaagtaaa tttaaaaaca
    33421 ttaataacag tatctttaac aatcatgctg ctttcatatt gtcctgttta tgcggcgcat
    33481 gttaaaaaaa ttaatcttga tgatgcaata cagctttcat tgtctaacaa tttggatttg
    33541 caagccgcaa ggattgaagt tgagcttgca aaaaacggtg taaagattgc caataggctg
    33601 caaaaccctg atttcaatat tttctataac tatggcagag ccggcagaag cgaacctcag
    33661 cagattggtc ttacagaaac cgttgaaata ggtaaaagag caccgcgtaa aaaacttgcc
    33721 aaatcagaat tgtataaaaa agagctggat gtcaaacttg cagaatttac gctcgagatg
    33781 gatgttagag aaacttatgt ggatcttgta ggggccaaaa ccgttttaaa tgacctattg
    33841 gcacaggata tgcttttgtg cgagctggct gatattgcgc aaaaacgctt tgaagccggt
    33901 aaagccacac aaacagatgt aatacaggca cagattgccc ttaacaggct ggctacttct
    33961 gttaattctg caagaacagc agttaacgct gcacgcaatg actttaacaa ggcgttaaat
    34021 ataaaggaag aatcggatat tatttatgat acaaaagagg atttcttgcc tggtgaaact
    34081 gtttttatct ctttgaaaac tcctgatttt aacaaaaagc tgcctccttt tgagcttgtt
    34141 gcacaaaaag ctcttgaaaa aaggctggat attagagcag caaagcaaga agttgatatt
    34201 gcacgtaaaa atctgacagt tgtttcaagg caaagaatac ctgatgtaga gttgtttggc
    34261 ggctatgcat accttgctca cactaagtca gattccggaa actacgaggc aggtgcatat
    34321 gccggtgctg cattgaataa tattccggtt ttttatacct ataagcctga aataaaaaat
    34381 gcaaaactcc agatagaaca ggcacagatt aactatgaat ctgcaaaaaa taaagccctt
    34441 aaagatttga gcactgcgta tgaaaggttg ataacttcgc aaacaaactt gcttttttat
    34501 aaaaacaagc ttgtcaaaga ttctgctgag ttaattagaa tttcacaaaa aaattataaa
    34561 gaaggtaaat ctgacctgac ttccgtaatt atgatgcagc aatcttttag agaaattgta
    34621 actgggtata acaatgctct cactgattat tacacagatt ggattgactt tttaagagaa
    34681 gttaatcagg aagactttaa tcttttcgac gaaaatcttt gatattaaat aatatctttg
    34741 cacgcaaatt gcaaaaagct tcccataagg ttttcgttcc agacttttac atcttgagga
    34801 accttgagca ctgcaggggt aaaattccat atgtatttta tgtttgaatc aatcaaaaag
    34861 tcggcaacct gctgcgcgtt ttgtcttggt actgtcagta ttgcaatatc aacaccaagc
    34921 ctttgtgtca ggttaggcaa ttttgatatg tgaaaaattt gtttgttatt aacctgcata
    34981 tcaacttttt gagggtcatt gtcaaaaagt gcaagtatat tcagcccgta gctgttaaaa
    35041 ctgtcatatt ttgcaagcgc aagcccnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
    35101 nnnnnnnnnn nnnngagtgt tttttcaata gaatctttaa ggtcttttac catatatccc
    35161 acacggcatt tacctgcatt gtttaacagt ttaaaatctt ttcttacctg cgaatcatca
    35221 atgccaagtc gttgtgcaat ttgagggctt gagattgttn nnnnnnnnnn nnnnnnnnnt
    35281 gctgtgatat agtgtcagtc tgtttgtaat tttttccggt atgtttttgc tcataataac
    35341 gttacctata aaaatcctga tagaattata caataaataa agaaaaaaat cacgatttca
    35401 gcttttgctt gataatattc aaaaaatgcc ttaaaatata gcttggtatt ggtgaatttt
    35461 atcactcaac tgcacccggt cgaagacaaa taaaggaagt taaaatgcaa aaagaaaaaa
    35521 ctcaaactat tactattaaa gtgtgtatgg gcagctcttg ctttgccaga ggcaatgctg
    35581 caaaccttga ttatattgaa aattttgtta aagaaaacgg tcttgatgca aaaatcgaag
    35641 taatcggctc aagatgtgaa aacaactgtg cagttggccc aaatgttatt attaacggcg
    35701 aaaactgcga gtctgcttct cctgtcagat tggaagcaat acttaaaaaa tatctttaaa
    35761 cagcatcctt aaaaaaataa atatgaggtc acgatgaaca atcagtatcc gatttacaca
    35821 ctcaaaaatg agtgcgtaga ctgctataaa tgcgtacgcc agtgcagtat gaaggctata
    35881 cgtatagaaa acggacatgc ttcggttatt ccggaaaagt gcattgcatg cggccattgt
    35941 gtgcttgttt gtccttctga agctaaaaaa ataagaaatg acctcaacag agcacgtgct
    36001 gttttgacag ctaaaaaacg tgtgtttgtt tctcttgctc cgagctgggc cggatttttt
    36061 aactgtaata ccgagcaaat aattactgcg tttaaaaaac tcggttttga aggagtctct
    36121 gaaacagcac ttggcgcgca ggaagtgtct attgaagtaa caaaaatact ctcggacagg
    36181 gacaaaaaac tccatatttc aagtgcttgc cctgcaatcg tagactacgt aagactctat
    36241 atgcccgaat acacaaaatt tattacaccg gtaggatctc cggcaatgac acatgcaaag
    36301 ctgctcaaaa aacgttacgg tgaagatatt ggcgttgtat ttgtgggccc ttgtattgca
    36361 aagaaaaatg aagcggataa aaatccttct cttatagatg tttctctgac atttcatgaa
    36421 gcagcacaat ggtttgagca ggaaaatatt gtgctcgggc aaatcgatgc tgatgaagat
    36481 gttaaatttg taccgaaaaa agcatatgaa ggtgcttatt acccgataga aggcggtatg
    36541 aataaaacaa tcaggctttc cggctgtgct aaagatattc agctcgtgag cataagttct
    36601 attcctgcat ttagagactc tttgcaaaat cttgatgatt ctaaaattga cagaacgata
    36661 ttcctagagg cacttgcctg tcctggcggc tgtgcaaacg gtccgtgcat ggatnnattc
    36721 ttcaaaaccg ggtgtgcttg caatgtctga tattcttagg acagtcaagc taagggatga
    36781 tatcccctcc gagccggaag ttgttgtgga aaaagaatat aaagaaagac cgcaaaacaa
    36841 ccgtcactac acgcctgaac agattgcaga agcaatggcc agtatcggta aacacggaat
    36901 agaagatgag ctcaattgcg gaggctgcgg ctatgatacc tgtcgtcagc tggcccaggc
    36961 tcttttgtca ggcgatgcag agccttctat gtgtgtgtct tatatgagaa aacttgctat
    37021 tagaaaagca agcgcaatgc ttcgttctat gccttcggct attgttatgg ccgatgccaa
    37081 cctcaatatt atcgaaacaa acgaagcttt tgtaagaatg tttgctcctg atttgcttga
    37141 aatctttaaa gatcgccccg aagggcttgc cggcggtgca ttagacaggg ttgtaccttt
    37201 tactgatttg ttcaaacgta ctttaaaatc cggcaaagat attcataaag aacgttatgc
    37261 tgtggacaaa aatctctatg acatagctgt ttttgaaata gaaagaaaca aaattgtcgg
    37321 tgctgtaatt actgatgtga caaaaacaga gatgaaacgc gaacagatag caagaaaagc
    37381 tcacgaagtt atcgaaaaaa atatagcaac agtacaaaat attgcttgtc ttctgggtga
    37441 acacatggtg gatacagagc tgctgctcag ccagattgcc cagggttatg aagaaaaacc
    37501 cgaagatgat gagcaggaaa tgaaataagg atgcacaatg cctgaagaat cattttttgt
    37561 tgacatagat tgctaccagc aaaaaaaaga cggtcagaat acctttggcg attgttttaa
    37621 atcaaaaagg ttcacagacg aagggcgtct tttggctgta ttgtcagacg gtttaggtag
    37681 cgggataaag gcaaatatcc ttgccacaat gacggcaaca atgattctca aatttataga
    37741 agaaggcaaa gatattctga aagcaacaga agtaatcatg aactctctgc ctgtttgtca
    37801 ggtcagaaaa atcagctatg caacgttttc tgcgtttgaa tgtactgatg acgggtacat
    37861 aaaaattgta gaagagggca accctgattt tatccacata agaaacgggc aggtgcttga
    37921 acacgagccg cgtgttatta cgtctaaaaa attcacaaac cggcatatgc atttatacaa
    37981 gtttaaactt gaacccgaag acaggctcgt attttgttcg gacggggtta ctcaagcagg
    38041 catgggcaca gatgagtaca agcttggctg gcgtcgcgag gggcttatag attttgtaga
    38101 gggtgaactg cgccgtaatc ctacaatttc cagccgccat ctggcttgtg aaatagttaa
    38161 agaagcaata agaaaagagc ccgaaagaaa agccaaagat gacgtatctg ctttgattct
    38221 gtattttaga aaacctagaa aactattgat atttacaggc ccgccgtacc gtcaggacag
    38281 agatgccgaa tattcaaaaa tatttgacga ttttgacgga cgcaaggcta ttgttggcgg
    38341 tactacagca aaccttattg ccagagagct cgggagagaa ataacaacgg aaaagtataa
    38401 caagggtatg ctgccggcat gttcgcatat ggatggcgtt gacttgataa cagaagggat
    38461 tttgacgctt acaaaagtgc tggaatatct taatgaaggc tatgatagat ggcctgatga
    38521 tgcggctgga aggctcattg aacttttact tgattctgac gtcatagaat ttatgatagg
    38581 gtcaaagctg aatcaggcac attatgaccc tgatttgcct ctggaattgg aaattcgtaa
    38641 aaatgttgta aaacaactgg aaaaaatttt atcaggacgt tatattaaaa aggtaaacct
    38701 caagtttatt taatgtcatc aagacaaaat ctaaatcagc aaagggagaa ttaaatggaa
    38761 gaatccggaa aaattttagt ggaattatgt tttggtacca cctgctttgt aatgggtgcg
    38821 tcaaaattgc aggagcttga gtcactcatt cctcctcagt acaaaaaata tgtggatata
    38881 aaagcccaca cttgtctgga tttgtgcaaa aatgcgacat acatgaaagc tccgtttgta
    38941 aaaatagaag gcgaaataat ctctgaggct acagttgaga aagtattgaa agcgattgag
    39001 agtaaattaa atggataaca gtaatacaac ccacttaaaa cgagaagtac tggttagatt
    39061 aataagagct tttattaatc aggaaatggg ctcaataaga gagcttcctt tccaaatgcg
    39121 ccccaaaaac ggtgacgctc cttacagatg ctgtatttat aaagaaagag caatcttaag
    39181 acaaagagca attgccggac ttggctgcag cgttgaaaca gatgatgaaa tgacatcatt
    39241 gaatgaatat gctaaacagg caatggaaag aaaagaaccg gaaggcgaaa ttcttacggt
    39301 tgttgatgcg gcatgcaaag gctgtgtacc aagccgtgta tatgttacag agttgtgtca
    39361 gggctgtgtc gcaagaccgt gtgtttctac ttgtaaattt ggcgcaattc agattaaaga
    39421 cggccgttcc gttattgacg gcgaaaaatg caaaaactgc ggtatgtgta tctctgtatg
    39481 cccatacagt gcaattgtaa aacttaaagt gccgtgtgaa gatgcctgtc ctgttggtgc
    39541 tattcacaaa aatgaaatgg gccacgcagt tatcgacttt gataaatgca tcagctgcgg
    39601 tgcctgtgtt ggtgcttgcc cgtttgcagc tgtacatgaa aaaagcgaag ttattgatgt
    39661 attaaaagca atgagagacg gcaaaagagt agttgcaatg ctggctccgg ctgttgtcgg
    39721 acagcttcct gtttctatta acaaaatagc tcaagcactt gtagaatccg gattttcaga
    39781 agtttttgaa gttgcacaag gtgctgatac tacagcaaga accgaagccg aagactttaa
    39841 agaaagaatg gaaaaaggca atgagtttat gacaacatct tgttgtgctg cttacaacga
    39901 actcgtggat aaacatatcc ccgagatgaa accttttcgt tccgaaacaa gaactcctat
    39961 gcattacaca gcagagtttg ttaagaacaa gtatcctgat gcggttactg ttttcatcgg
    40021 gccatgtgtt gcaaaaagaa aagaagctca aaaagatgag tacacagacc ttgttatgaa
    40081 ctttgaagaa atgggcgcac tctttgttgc tcgcggaata gaagttgcta attgcaaaga
    40141 ttacgaattt gcaaacgaag cttcaaaaga aggtagaaac tttgcaatca caggcggtgt
    40201 tgcgcagtct gtcaaagttg cattaaaaga cttccctgaa ttgttcccga catgtgttaa
    40261 cggtctgaat ccaaaatcgg taagagacct taaaaactgg gccaaaaaag ggcagtgccc
    40321 cgagggcaac cttgttgaga ttatggcctg cgaaggcgnn ggttcagctt gtttgaataa
    40381 caaacgaatt actactaaaa aagtcagtga atacgcaaat tcgagcaagt gtataaacga
    40441 ccttgacagt tgcgaagcta aaaaagaaac attgaataag taaataaaaa gacctgtttt
    40501 taaagcaggt ctttttttga ttgaaaacat aaaacagaat ctataatgct tgattataat
    40561 tcatgtttaa tttataacat gggtgtattt aatacattgt acaaaaagaa gaggagctaa
    40621 aaatggctaa aaaagttgca atcaacggct tcggtagaat cggccgtaac acattaagag
    40681 cagcagttaa agaaggtatc ttcaacgaaa tcgattacgt tgctatcaac gaccccggtt
    40741 taaaacctga agatgcagcc agacttttca aatatgactc tgtaatgggt aaatttgatg
    40801 gtgaagtaga agcttatgat gaaggtatca tcgtaaacgg caaaaaaatt aaattctttg
    40861 cagaaaaaga tcctgcaaac cttccttgga aagatttggg tgttgatgtt gttgttgaat
    40921 caacaggttt cttcacagat gcagaaaaag ctaaagctca cattgcagca ggcgctaaaa
    40981 aagttatcat ttctgctcct gctacaaacg aagatattac tattgtattg ggcgttaacg
    41041 aaaaagaata tgaccctgca aaacacaatg taatttctat ggcatcttgc acaacaaact
    41101 gcttggcacc tgttgctaaa gttatcaaag aaaaattcgg tattgttaaa ggtttaatga
    41161 caactgttca ctcttacaca ggtgatcaaa gaatcttaga tgccggccac aaagatccaa
    41221 gaagagctag agctggcgct ttgaacattg ttcctacaaa aactggtgct gctaaagctg
    41281 ttgcattggt tcttcctgaa ctcaaaggca aattggatgg tttcgctatg cgtgttccta
    41341 caccggacgt ttcacttgtt gacgttgtat tcgaaactga aaaacctgtt acagttgaag
    41401 ctgttaacgc tgctttgaaa gaaggcgctg acggacacgt tctttgctat acagaagaac
    41461 cgttagtttc tactgactac attggttcat ctcaatcatc tacagttgac gctttgttaa
    41521 caagagttat gggcgacaac atggttaaaa tcatttcttg gtacgataac gaaatgggtt
    41581 attcaacaag attggctgaa actacaaaaa tggttgcaga aaaagtatag ttttaaaact
    41641 ataaaaaaaa agagacaaat ccaaaagggt ttgtctcttt ttttagctat aaatatactc
    41701 tgtaagtttt ttttcaaatt tgttgccgag tgtcactgcg cctttgcgag cgtaatctct
    41761 tgtgtgggcc aggtctatga cctggtcaag gttgtatttg gcatggttca tataactttt
    41821 aaaagcatca actgcctcag gcgagtgtaa gtatgcattt tctgttttta actcttcatc
    41881 cggcatcttt tgaatttttt gcataagttt aaaaattttg ttaaacacac taaatgttat
    41941 tttgtttatg tcaattatgt tgtcgttgac tgcataaatc ttcatttttt ctccgttatt
    42001 cggatttaca aattcctcgt aggatatatt taaagtgtta gggttatatt ggtttggaaa
    42061 a
//
LOCUS       DABS01000123            3651 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_21248, whole genome shotgun sequence.
ACCESSION   DABS01000123 DABS01000000
VERSION     DABS01000123.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3651)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3651)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3651
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..340
                     /locus_tag="CPT85_05105"
     CDS             <1..340
                     /locus_tag="CPT85_05105"
                     /inference="COORDINATES: protein motif:HMM:PF01195.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="DAB23339.1"
                     /translation="SVMNFYKIPKEDILVIYDDIAMPVGKMRFRSKGSDGGHNGIKSI
                     INVLGGNNSFDRLKIGIGPQPPLPSEVYVMQNFTQEQLSEIKDVLKTAKDAVEVYLEQ
                     GLNAAQTKFN"
     gene            complement(341..841)
                     /locus_tag="CPT85_05110"
     CDS             complement(341..841)
                     /locus_tag="CPT85_05110"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23340.1"
                     /translation="MIVDCNLLALNNPDDILPYPTYKSGLLDTDKGYVRFGYPSVSYP
                     ILNMPYILEDFEGNTLPPGHYQIVLSPDRRTLYFVESNQIKASVPVVKLIEKMVSQEE
                     EKKRIEEQEKIAKKYKNNPRKRPLDQTERKKQASMEASIDNSQPEYYILNYKNGNIKA
                     TGYIFK"
     gene            complement(844..1701)
                     /locus_tag="CPT85_05115"
     CDS             complement(844..1701)
                     /locus_tag="CPT85_05115"
                     /inference="COORDINATES: protein motif:HMM:PF08478.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23341.1"
                     /translation="MQNQDNNDNINIERRVKINQMQRNVRRGKERLKWFRCWVRLFMI
                     MVLIFAAYKVYKLPQWYLNKNIFSSASNNTLKIVGNSITPTYRIISILRQTPVPQRPI
                     YLFNTSKIEKEIEKLPPIKEVYIQRLWFPARLNIMVVERRPILSISPDPKVAPIAFFA
                     EGGKLIGRDYLPLKNVEKTILVLTYGTKGDDYRTWDEKRIKKIETIVHAMEQFSGQPV
                     EYIDLRNPKDIYIKLPQVNVRLGELDYMALSRVRNISAILPQIKTLNKKIKYIDLRWE
                     DTQYIKLEE"
     gene            complement(1719..2669)
                     /locus_tag="CPT85_05120"
     CDS             complement(1719..2669)
                     /locus_tag="CPT85_05120"
                     /inference="COORDINATES: protein motif:HMM:PRK01372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="DAB23342.1"
                     /translation="MGYDVKQKIDTNAKIAVLMGGPSSEAEISRRSGKNVFKALQNLG
                     YKNAELIEVDENIAATLRTKNIEFVYNAMHGRFGEDGCIQGMLEVMGIPYTGCGVMAS
                     SVCMNKEYTKNILKEAGIPLIKSVLIKKGEDYKEKIKELKYPFMLKPVSEGSSIGMYK
                     VNNPEELAECFEKSAKYGQDVMVEEFIQGKGLTVGVLEDGDMMFATEIIEFRTKTEWY
                     DYEAKYTAGMTEFIIPAELSEEMTKKVKQIAVDAFKACDCRGVSRVDFMVADDKAYVL
                     EINTSPGMTDLSDLPAQSNAMGIDYDTLVQIILNGAGLNK"
     gene            complement(2642..3550)
                     /locus_tag="CPT85_05125"
     CDS             complement(2642..3550)
                     /locus_tag="CPT85_05125"
                     /inference="COORDINATES: protein motif:HMM:PRK13905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylenolpyruvoylglucosamine reductase"
                     /protein_id="DAB23343.1"
                     /translation="MTCEPIENYELKKHTSFKSGGCAKRAFFPQSVEEFVQLLDTLKN
                     PIVLGSCSNVLISSQGINEDVIITSKMNGFEVVNNTITAQCGVKVPMLAREAEQNNLS
                     GFEFMIGFPGSVGGAVYMNASAHSQAISDTFKVGRVFDTESKKVVELNKDEMKFGYRS
                     SILQEGRYILLDAKFELLPVNKEEISSIMNRNLEFRKGKQPSLAMPNAGSIFRNPPND
                     SAGRLLEKAGVKGLKEGGAQVWLGHANFIVNIENATSKDVSKLMNKMYNEVKDKYTIK
                     LVPEVKYIGIKSKEEEELWDTMLNKK"
BASE COUNT          996 a          758 c          608 g         1289 t
ORIGIN      
        1 aagtgttatg aacttttata aaataccaaa agaagatatc cttgtaatat atgatgatat
       61 tgcaatgccg gtgggcaaaa tgcgttttcg ctcaaaaggc tctgacggag gccataacgg
      121 tataaaatct ataatcaatg tgcttggcgg caataatagc tttgaccgtt taaaaatagg
      181 cattggccca caacccccgc tgccatcaga ggtttatgtt atgcaaaact ttacgcaaga
      241 gcagctgtca gaaatcaaag atgtgctaaa aactgccaaa gatgctgttg aggtgtacct
      301 tgaacagggc cttaacgctg cgcagacaaa gtttaattaa ctatttaaaa atataacctg
      361 tagccttaat atttccgttt ttgtaattga gaatataata ttccggttgt gaattgtcta
      421 tagaggcttc catacttgcc tgtttttttc gttctgtctg gtcaagcgga cgctttcttg
      481 gattattctt atattttttt gcaatttttt cttgttcttc aatacgcttt ttttcttctt
      541 cctgagagac cattttttca atcagtttta caacaggtac agaggctttt atctgattag
      601 actccacaaa atacaatgtt cgtctgtcag gtgaaagcac tatctgataa tgccctggtg
      661 gcagcgtgtt gccttcaaaa tcttctaaaa tataaggcat atttaaaata ggataactga
      721 cagacgggta tccaaacctt acataaccct tgtctgtatc caaaagacct gacttgtaag
      781 ttggataagg aagtatgtca tcaggattat ttaatgccag aaggttgcaa tccacaatca
      841 tatttattcc tcaagtttga tgtactgagt atcttcccat cttaaatcaa tgtattttat
      901 ttttttgttg agtgttttaa tctggggcag tattgcagaa atatttctta cacgtgaaag
      961 cgccatataa tcaagctcgc ccaaccttac atttacctgt ggaagtttta tataaatatc
     1021 ctttggattt ctcaaatcaa tatattccac aggctggccc gaaaactgtt ccattgcatg
     1081 tacaatggtt tctatttttt ttattctttt ttcatcccag gttctgtaat catcgccttt
     1141 agtcccataa gtcaaaacaa gaatggtctt ttctacattt tttaaaggca gataatccct
     1201 gccgataagc tttcctcctt ctgcaaaaaa cgcaatgggt gctacttttg ggtcaggcga
     1261 aatactcaaa atcggtcgtc tttccacaac cataatattt aaacgtgcag gaaaccacag
     1321 tctttggata taaacttctt taatgggtgg aagtttttcg atttcttttt caattttaga
     1381 tgtattaaaa agataaatcg gtcgctgcgg tacgggtgtt tgcctcaaaa tagatatgat
     1441 tctgtaggtg ggtgtaatac tgttgccaac aattttgagt gtattgttgc ttgcagacga
     1501 gaatatattt ttgtttaaat accactgcgg aagtttataa accttgtatg ctgcaaaaat
     1561 caaaaccatg atcataaaca aacgaaccca gcagcgaaac catttcagac gttccttacc
     1621 gcgtctgaca tttctttgca tctggttaat tttaaccctg cgttctatat ttatgttgtc
     1681 attgttatcc tgattttgca tccctaatat ttttattctt atttgttaag acctgcgcca
     1741 tttagtatta tttgtacaag tgtatcataa tctattccca tggcattaga ctgcgcggga
     1801 aggtcgctca aatctgtcat acccgggctt gtgttgattt cgagcacata tgctttgtca
     1861 tctgcaacca taaaatctac tctgctgacg cctctgcaat cacaagcttt gaacgcatca
     1921 acagcaattt gttttacctt ttttgtcatt tcttctgaca attcagcggg gataataaat
     1981 tcagtcatcc ctgcagtata ttttgcttcg taatcatacc attctgtttt tgtacggaac
     2041 tcaataatct ctgttgcaaa catcatatct ccgtcttcta aaacaccaac ggtaagccct
     2101 ttgccttgta taaattcttc taccataaca tcctggccgt attttgcaga tttttcaaag
     2161 cactctgcca attcttcagg attattaacc ttatacattc caatgctgga accttcagat
     2221 acgggcttga gcataaacgg atatttaagc tcttttattt tttctttgta atcctcgcct
     2281 ttttttatga gcacagattt aataagagga atccccgcct cttttaaaat gttttttgta
     2341 tattctttat tcatacatac agaactggcc ataacaccgc agcctgtgta tggtatgccc
     2401 ataacttcga gcattccctg aatgcagccg tcttctccaa aacgaccgtg cattgcattg
     2461 tatacaaatt caatattctt tgttcttaaa gttgcagcta tgttttcatc cacttctata
     2521 agctctgcat ttttgtagcc caaattttgc aatgctttaa aaacattttt acccgaacgt
     2581 cttgatattt cagcctcgct tgacggaccg cccataagca ctgctatttt tgcatttgta
     2641 tctatttttt gtttaacatc gtatcccata attcttcttc ttctttactc ttaattccta
     2701 tatattttac ttcaggtaca agcttaatag tgtatttgtc ttttacctca ttatacattt
     2761 tattcataag ttttgaaaca tcttttgatg ttgcgttttc aatattaaca ataaaatttg
     2821 catgtccgag ccatacctgt gcgccgcctt cttttagtcc ttttacacct gctttttcaa
     2881 gcagcctgcc ggcagaatca tttggcggat ttctaaaaat gctgcctgcg ttaggcattg
     2941 caaggcttgg ctgtttgcct tttctaaatt caagatttct attcataata gaggaaatct
     3001 cttctttgtt aacaggtaaa agctcaaatt ttgcatccag aagaatatat ctgccttctt
     3061 gcaaaatgga gcttctgtag ccaaatttca tttcgtcttt gttgagctca acaacttttt
     3121 tgctttccgt gtcaaaaaca cgacctactt tgaatgtgtc tgatatagcc tgtgaatgtg
     3181 ctgatgcgtt catgtagaca gctccgccca cagaaccagg gaaccctatc ataaactcaa
     3241 aaccgctaag gttattttgt tcggcttcgc gtgcaagcat tggtactttt accccgcatt
     3301 gcgcagtaat tgtattgttt acaacctcaa acccgttcat tttagaagta ataattacat
     3361 cttcgttaat tccctgtgaa gaaattaaaa catttgaaca actgcctaac acaataggat
     3421 ttttgagtgt atctaaaagt tgtacaaact cctcaacgct ctgcggaaaa aatgcccgct
     3481 tagcacagcc gccacttttg aagctggtat gtttttttaa ttcgtaattt tcaatgggtt
     3541 cacacgtcat ttaaacacct gcttttgtat catcgtggag ctttttcaat tctccgccga
     3601 ttcttgtgac atcacctgct ccgagagtta ttaccatgtc tccggatttg a
//
LOCUS       DABS01000124            6061 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_17901, whole genome shotgun sequence.
ACCESSION   DABS01000124 DABS01000000
VERSION     DABS01000124.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6061)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6061)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6061
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..734
                     /locus_tag="CPT85_05130"
     CDS             <1..734
                     /locus_tag="CPT85_05130"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23305.1"
                     /translation="SRETEFKDNIKKFNQLLSVSQIPMYDKPHIKNAFEQAKNTAYFE
                     SNDEIEKIKPLTNYFNNSYKELNDKISNVTFQKNNPDLFEEILKTKDILMNAQYFMFI
                     TPYHAAVKLKMKKAEIEKDMNNPKNGLLKNLDAVDRLHSVSDSVIESTKIYYKNKSSI
                     ETFVNQYNDIHAVLPSENEIKSAYKKLLDKSNELLKEQFSNTDEFYQKEYKDKKVTIN
                     LQKIDKTLKMQKKIIRELQKLVEMG"
     gene            complement(700..1479)
                     /locus_tag="CPT85_05135"
     CDS             complement(700..1479)
                     /locus_tag="CPT85_05135"
                     /inference="COORDINATES: protein motif:HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23306.1"
                     /translation="MGIKYQSVVQGLDSFVVKPKNYTTTAAYKLFIKADALRLANHFK
                     ESIKHYLSAILIDRKNYRTYMGLGISYKAEQKYDKAIDALEKARKLSFFTPEIHYELG
                     LCYLITGHFCEAIKSFHHAISLDRTNINAQLQLGVAHEFIEEYDMAILIYHTIIENNP
                     SFISAYNHLSALYMNLGEFKAAGCVFSQILKANPNFSKAYLGLAICFDKMSNKSRAMH
                     YYKLFLDKKPHSHHAERIKKRIAKLRNLKESNPSQPTFAIL"
     gene            1657..3624
                     /locus_tag="CPT85_05140"
     CDS             1657..3624
                     /locus_tag="CPT85_05140"
                     /inference="COORDINATES: protein motif:HMM:PF01973.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23307.1"
                     /translation="MSDILKSNLSFIEKHNPSLCAKLTDISEYKTNIEIKPNLAGEYN
                     LAINGMGVHSLTGALQEAKDICETLPNNSNNSIHVVYGIGLGYIVDELVNNAKGNVIV
                     YEHDLDVLHFVLSAVDFAQNFNTQKLYIASDITEFEQILYKVFKYKSKATLSCLDYYK
                     AQDKLRYEAFQAWLKRKVELVDHNFKLQALKMYGFFKNTLIGLDKKYKLPFLTENKDA
                     LKGKPAIIVSAGPSLNKNIEILKKYKDNAVIFCVGTALRTLYNNNITPDFLNVIETEN
                     TSLHYDLPCSKDIAFIAEPFTQSAYLDIPFKKRFITPSLETDASRWFLETAGKEFIPF
                     ETKGTVAYHAIYSAYYLGCNPIILIGQDLAYPDGQCYAKGSKFDGLECVYDNSEQKYK
                     IKPRNFEEYRDSYYATEGYSIEKKNEMIDIKLKELNKNITFVKGQDNNVLPTDNVYAI
                     FLDYIQDFAANYGHERTLINSSLGGALISGFDLLSLEDAYEKYAPTSIDKQNISGLLN
                     DESTCDIEIVLKNLKQDYKKLAETKPLFEEGYEISTKLKELVDNGRDYSPKSDSPLNK
                     LGALYSIITNRYMLKSRVVKILHAYSYCNLSYLIRENNIIDNTEQFHVFSNAYYDYFY
                     RGLCKTNQAIRLLQEVIDNLEKINESSVAKG"
     gene            3599..4036
                     /locus_tag="CPT85_05145"
     CDS             3599..4036
                     /locus_tag="CPT85_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014970885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="DAB23308.1"
                     /translation="MKAVLQRVKKASVTIDGEIYSSINAGMLVLLCVEKEDTKESLDW
                     MVNKILSLRCFEDENNKMNKSLIDINGEILAVSQFTLAADCKKGTRPSFDKAEAPEKA
                     KAMYEQFVTKLKESNLCVKTGVFAAMMDVSLVNDGPVTFVLEK"
     assembly_gap    4116..4125
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4170..5321
                     /locus_tag="CPT85_05150"
     CDS             4170..5321
                     /locus_tag="CPT85_05150"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23309.1"
                     /translation="MYVNKCTKCGAEFETKNPKRVICPNCLYPDKKPGSETGSETGEN
                     SQNQSQNGSSYERPASYSAGGYSTDSYPRRDDRPYQQQDRPRYDGQRSYNQGGYQRPQ
                     QGGYNRPQGGYQRPQGGYNNDRGYDRPRAPRPYDRNDGQRSYNQGGYQRPQQGGYSRS
                     QGGYQRPQQGGYNRPQGGFNRPQGNRSPMGGGRPQRPPKQLLVNKEQLAQIEELYKKM
                     LPLPNPDAHEVIGEQIGLEARKVFFGINLVRQKMMLPKLAFPKRKLAVSPDQLTAIKM
                     LYEPLLPLPPIGCHKIISAQLKIDEWRVHVGIGLIRKQLGLDRWNPEREDAPAEFKQQ
                     AQKEASEAVKTEEKAVEQEAPAEEKPKKRGRKKAEPAPEETAEPFKEDE"
     gene            5314..5616
                     /locus_tag="CPT85_05155"
     CDS             5314..5616
                     /locus_tag="CPT85_05155"
                     /inference="COORDINATES: protein motif:HMM:PF01782.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23310.1"
                     /translation="MSNLVSIGKILNFHGIKGEVKMGFSAGKEDLIKKLKQVYIFQNN
                     IKLTYDVSSVRFHKNFAIIKFKQINSVNEVMEIKGLLVHITEDMLKSKLEKDEFLX"
     gene            5604..5855
                     /locus_tag="CPT85_05160"
     CDS             5604..5855
                     /locus_tag="CPT85_05160"
                     /inference="COORDINATES: protein motif:HMM:PF05239.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23311.1"
                     /translation="MFXIKDLVGLAAFDTDGNKLGVVADIGENKASNLIEIQKANGLK
                     FMVPFVKEWVPVVDLDNQKIVINMIEGIDTDSTKXDIKE"
     assembly_gap    5611..5612
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    5839..5840
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5852..>6061
                     /locus_tag="CPT85_05165"
     CDS             5852..>6061
                     /locus_tag="CPT85_05165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003866682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="DAB23312.1"
                     /translation="MKFDVMTLFPDMINQACSHSIVARGIDSGIINVNAINRRDYSKD
                     KHKKVDDTPFGGGAGMVLMCQPYFDC"
BASE COUNT         2153 a          975 c         1121 g         1798 t
ORIGIN      
        1 cgtctcgaga aactgaattt aaagataaca ttaaaaaatt taatcagctg ttgagtgttt
       61 ctcaaattcc tatgtatgac aaacctcata ttaaaaatgc atttgaacaa gcaaaaaata
      121 ctgcatattt tgaaagtaat gatgaaattg aaaaaataaa gccgttaaca aattatttta
      181 acaactccta taaggagcta aatgacaaga tatccaatgt gacttttcaa aaaaacaatc
      241 ctgatttgtt tgaagagatt ttaaaaacaa aggatatatt aatgaatgct cagtatttta
      301 tgtttattac tccttatcac gctgcagtaa aactcaaaat gaaaaaagct gaaattgaaa
      361 aagatatgaa caatccaaaa aatggtttgt taaaaaatct cgatgcagta gacagattgc
      421 actctgtgtc ggattctgtt attgaatcca caaaaatata ctacaaaaac aaatcatcta
      481 tagaaacatt tgtaaatcag tacaacgata ttcatgctgt tttaccctca gaaaacgaga
      541 taaaatctgc atataaaaaa cttttggata aaagcaatga gcttttaaaa gaacaattta
      601 gcaatactga tgaattctat caaaaagaat ataaagacaa aaaagtcact ataaaccttc
      661 aaaaaataga taaaacactc aaaatgcaaa aaaagataat tagagaattg caaaagttgg
      721 ttgagatggg ttagactctt ttaaattcct caattttgct atacgttttt ttattctttc
      781 agcatgatgc gagtgtggtt ttttatccaa aaacaacttg tagtaatgca ttgctcttga
      841 tttgttagac attttgtcaa aacatatagc caatccaaga tatgctttgc taaaattagg
      901 gttagccttt aatatttgag aaaaaacaca acctgctgct ttaaattctc caaggttcat
      961 ataaagagca gaaagatgat tgtatgcact aataaatgac gggttatttt caataatagt
     1021 atgatatata agaatagcca tatcgtattc ttcgataaac tcgtgagcaa caccaagctg
     1081 aagttgtgca ttgatatttg ttctatctaa tgaaattgca tgatgaaaac tttttatagc
     1141 ttcgcaaaaa tgccctgtga ttaaataaca cagacccaat tcgtagtgaa tttccggggt
     1201 gaaaaatgac aattttcttg ccttttcaag agcatctatt gctttatcat atttttgttc
     1261 ggctttgtag gatattccaa gccccatgta agttctatag tttttacggt ctataagtat
     1321 agcgctaaga tagtgcttta ttgactcttt aaaatggttt gcaagtctta atgcatcagc
     1381 ttttataaaa agtttataag ctgctgttgt tgtataattt ttaggtttta ctacaaagga
     1441 atccaagccc tgaaccacac tttgatattt tatccccaaa atctcttccc cgtaaaatct
     1501 agtatttcct taactatatt ttagagattt tgttgttctt tgttattgac cttgaggttt
     1561 atttttttag tccgggtggt taatatatcg gcatgactct ctattttttg tgcaagaacc
     1621 ttgtataata ttggcataac aagttttggg ggatgtatgt ctgatatttt aaagagcaac
     1681 ttaagtttta ttgaaaaaca caatccgtca ctttgcgcta aacttactga tatatcagaa
     1741 tataaaacaa atatcgagat aaagcctaat cttgcaggcg agtataatct tgcaattaac
     1801 ggtatggggg tccattcctt gacaggagcc ttgcaagagg ccaaagatat ttgtgaaact
     1861 cttccaaaca attctaacaa ctcaatccat gttgtatacg ggattggtct tggatatata
     1921 gttgatgaac ttgttaacaa tgccaaaggt aatgttattg tttatgaaca tgatttggat
     1981 gtattgcatt ttgttttgtc agcagtggat tttgcacaaa attttaatac tcaaaaactc
     2041 tatattgcat ctgatattac agaatttgaa caaatactgt ataaagtatt taagtataag
     2101 tctaaagcca cattatcctg tcttgattat tacaaggctc aggataaact aagatacgag
     2161 gcttttcagg catggctaaa acgtaaggtt gagctggtgg atcacaactt caagctgcaa
     2221 gctttaaaaa tgtacggttt tttcaaaaat acgcttattg gccttgataa aaagtataag
     2281 cttccttttc ttacagaaaa caaagatgcg ttaaaaggca agccggctat tattgtttca
     2341 gccgggccat ctttaaataa aaatatagaa atattaaaaa aatacaaaga taatgcagtg
     2401 atattttgtg tgggcactgc tttacgtacc ttgtacaata acaatattac tcccgacttt
     2461 ctaaatgtaa tagaaacaga aaatacctct ttgcattatg atttaccatg ttcaaaagat
     2521 attgctttta tcgctgagcc ttttactcaa tcagcatatc tggatattcc tttcaaaaaa
     2581 aggtttatca ctccgtcttt agagacagac gcatcaagat ggttcctaga aactgccggt
     2641 aaagaattta taccttttga gactaagggc acagttgcct accatgcgat atacagtgca
     2701 tattatcttg gctgcaaccc tattattctt atcgggcagg atcttgcata tcctgacggt
     2761 caatgttatg ccaagggttc aaaatttgac ggacttgaat gcgtttatga taacagtgaa
     2821 caaaaatata aaattaaacc aaggaacttt gaagaataca gagattctta ttatgctaca
     2881 gaaggctaca gcatagaaaa gaaaaatgaa atgattgata taaagcttaa agagctgaat
     2941 aaaaatatta cctttgttaa aggacaagac aataatgttt tgcctacaga taacgtttat
     3001 gcaatatttc ttgactatat tcaagatttt gcggcaaatt acggacatga aagaactctg
     3061 atcaactctt ctcttggagg cgccctgatt tcaggctttg accttctttc acttgaagat
     3121 gcatatgaaa aatatgctcc cacaagtatt gataagcaaa atatatcggg cttattgaat
     3181 gatgaaagca catgcgatat agaaattgtt ctaaaaaatc ttaaacagga ttacaaaaaa
     3241 cttgcagaaa ctaaacctct ttttgaagaa ggctatgaaa taagcacaaa acttaaagag
     3301 cttgttgata acggaaggga ctattctcca aaatcagaca gtccgttaaa taaacttgga
     3361 gctttgtatt cgataataac aaatcgatat atgctaaaat caagagttgt aaaaatcctt
     3421 catgcgtata gttattgcaa tttatcctat ttgataagag aaaacaacat tatagataat
     3481 acagagcagt ttcacgtttt ttctaatgct tattatgatt atttttacag aggattgtgt
     3541 aagacaaatc aagcaatcag gctgttacaa gaagttattg acaatttgga gaaaataaat
     3601 gaaagcagtg ttgcaaaggg ttaaaaaagc atctgtcaca attgatgggg aaatttattc
     3661 ttctattaat gcaggcatgt tagtgctttt gtgtgtagaa aaagaagata cgaaagagag
     3721 ccttgactgg atggtcaata aaattttgtc tttaagatgt tttgaagacg aaaacaataa
     3781 aatgaataaa tctctgatag atataaacgg agaaattctt gcagtatctc aatttacact
     3841 tgcagcagat tgcaaaaaag gcacaaggcc tagttttgat aaagcagagg cgcctgaaaa
     3901 agcaaaagcc atgtatgagc aatttgtcac aaaattaaaa gaatcaaacc tctgtgtaaa
     3961 aacaggtgta tttgctgcta tgatggatgt ttcgctcgtt aatgacggcc ctgttacttt
     4021 tgttttggaa aaataaagct tataatttgt aaaaaagctt gccatatatt atgtttgcat
     4081 ttaaaataat atcagatatt agaatgttaa ttattnnnnn nnnnnatttc aatagccttt
     4141 cgccttttac ttcaaaaggg tagtaaaaaa tgtatgtaaa taagtgtacc aaatgtggag
     4201 cggaattcga gactaaaaac ccgaaaaggg taatttgtcc taattgctta taccccgata
     4261 aaaaaccagg ttcagaaaca ggttctgaga ccggtgaaaa tagccagaac caatcacaaa
     4321 acggcagctc ttatgaaaga cctgcttctt acagtgccgg cggctattca acagattctt
     4381 atccaagaag ggatgacaga ccctatcaac aacaggatcg tccaagatat gacggccaaa
     4441 gaagctataa tcaaggcggt taccaaagac cgcagcaggg tggatacaac cgtcctcaag
     4501 gcgggtatca aagacctcaa ggtggttata ataacgatag aggctatgat agaccaagag
     4561 ctccaagacc gtatgacaga aatgacggtc aaagaagcta taatcaaggc gggtatcaaa
     4621 gaccgcagca gggtggatat agccgttctc aaggcggata tcaaagacct caacaaggtg
     4681 gttataacag acctcagggc ggatttaatc gtccacaagg aaacagaagc ccgatgggcg
     4741 gaggacgtcc tcaaagacct ccaaaacagc ttttggttaa caaggagcaa ttggcacaga
     4801 ttgaagaact ttacaaaaag atgctgccgc ttcctaaccc cgatgcacat gaggttattg
     4861 gagaacaaat aggtcttgaa gcaagaaaag tattctttgg tattaatctt gtaagacaaa
     4921 aaatgatgct gccaaagctt gccttcccga aaagaaaact ggcagtgtct ccggatcagc
     4981 ttactgcaat aaaaatgctt tatgagcctt tattgccgct gcctccgata ggttgtcaca
     5041 aaattatctc tgctcaacta aaaattgatg agtggcgtgt tcacgttggt atcgggctga
     5101 taagaaaaca gctcggactt gacagatgga acccggaaag agaagacgct cctgctgagt
     5161 ttaaacaaca ggctcaaaaa gaagctagtg aagcagtaaa aactgaagaa aaagctgttg
     5221 aacaagaagc tcctgccgaa gagaaaccta aaaaacgcgg cagaaaaaaa gcagaacccg
     5281 ctccggaaga aacagcagag ccctttaagg aagatgagta atttagtttc aataggcaaa
     5341 atattaaatt ttcatggcat taaaggcgaa gtcaaaatgg gcttctcggc cggtaaagaa
     5401 gatttaatca aaaagcttaa acaagtttat atttttcaaa ataatataaa gcttacttat
     5461 gatgtttcat ctgtgaggtt tcataaaaac tttgcaatta tcaaattcaa gcagataaac
     5521 tcggtaaatg aagtcatgga aataaaagga cttcttgttc atattaccga agacatgctc
     5581 aaatcaaaac tggaaaaaga tgaatttttg nnataaaaga ccttgttggt cttgcggctt
     5641 ttgatactga tggcaacaaa cttggtgtgg tagctgatat tggtgaaaac aaggcttcaa
     5701 accttattga gatacaaaaa gctaacgggt taaaatttat ggttccgttc gtaaaagaat
     5761 gggtgcctgt tgttgattta gataatcaaa aaattgttat caatatgatt gagggaatcg
     5821 atacagattc aactaaacnn gatattaaag aatgaagttt gatgttatga cactgtttcc
     5881 tgatatgata aatcaggctt gttctcacag tattgttgca cgcggcattg atagcggcat
     5941 aattaacgtt aatgcaataa atcggcgtga ctattctaag gataaacaca aaaaagtgga
     6001 tgacactccg tttggaggcg gggctggtat ggttttgatg tgtcagccat attttgattg
     6061 t
//
LOCUS       DABS01000125            9853 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9227, whole genome shotgun sequence.
ACCESSION   DABS01000125 DABS01000000
VERSION     DABS01000125.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 9853)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 9853)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9853
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..216)
                     /locus_tag="CPT85_05170"
     CDS             complement(<1..216)
                     /locus_tag="CPT85_05170"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23255.1"
                     /translation="MNNVKFSLKPAVSRYIIKIICKGELMKKINWQKSAVYNGFSLAE
                     ALITLLVVCVITIASVPVITKKHRAKFN"
     gene            complement(396..2606)
                     /locus_tag="CPT85_05175"
     CDS             complement(396..2606)
                     /locus_tag="CPT85_05175"
                     /inference="COORDINATES: protein motif:HMM:PF00395.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23256.1"
                     /translation="MLIIVSWIPIISNIRLGSPISVCLIKEGKMTINKLTLAAALTIG
                     LMAGTMNSGIASNVDISSLDMSKLAACPISGCQADVTPDTAVCPCAPAPVSDCGCNTG
                     CAAPCDPCNTCAPVDPCEPCNPCEAAAPCCQPVIQSVCASQIDGKSMAKQHYAYPANV
                     YSDTQAVGSQANNVIIGEGQGCGCPIAPSQGVMVSDLPTCGCACGEGITTGAAAELPV
                     LGSQTLDLNQVMTGGAAPVATGTCPIEMQTPSGMDVVKRSIVPFNPPITGGASPITGA
                     SSFEDVPAGFWAGCDINLLAENKVIAGYPDRTFKPNLPVSRAEIASMAVNGFNLRSCG
                     CPNKTFKDVPADHWANQAINTAVANGLMEGYPGDMFKPNKPVTRAEAMVTLAKGIPCE
                     MDNCKAEEILSKYCDGNKVPSWAKIPVAKAIESGALKDVPNPNEIQACKDASRADVAS
                     MLEAVRCAMGYSKKDVAYTAPDCGCTGGAAFVAKDEVVTIPTMCLKFEDEISAKSATI
                     GDRFAAKTTEDVMINGMSFPAGSKVYGKVTEVERPTGNCKGGLKLSFERIQNGDCKAN
                     LPQQVLTAQVKNDKKPNFFAKVIEAPFNWTGGVLGTVGRTVGGAIVSLGNAAEHVTDG
                     VGLTLGETLQGSLPAAGRSLMDSTKALVKAPIDLTRTALSGTIGLLQHTGDEVAYLVD
                     PKGNRVTSVNPRENITVAFGCNSCTGCAAPVQPCECDPCAKPAPCDCQNDCGCK"
     gene            2835..3095
                     /locus_tag="CPT85_05180"
     CDS             2835..3095
                     /locus_tag="CPT85_05180"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23257.1"
                     /translation="MSFGINGPSPQFGIQEAQNMRNNGGGGNLGYFQRQKKDEKKKKD
                     EIDIFEFSDENDVFIPEEESKEESIMQKASDFIKMFKKRRTS"
     gene            complement(3150..3398)
                     /locus_tag="CPT85_05185"
     CDS             complement(3150..3398)
                     /locus_tag="CPT85_05185"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23258.1"
                     /translation="MAFEIPKINMFQQPIQQIGAIGARGTQATGGVQKTGGQMFGGLQ
                     GGTAVDNELADMRRFIGPYNGTGQIRPQKAEANLFYLA"
     gene            complement(3581..5548)
                     /locus_tag="CPT85_05190"
     CDS             complement(3581..5548)
                     /locus_tag="CPT85_05190"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23259.1"
                     /translation="MAEALITLLIVCIIVLASVPVITKKRRNMDNSHGKYLCTLNSAG
                     NYVEYYSRAAIGKEEDPDTWHEVTNSGYKDTVSWYNSDGQLLSKERFQCKFTPPPGAR
                     NFNVTVIGGGSGGRDGTSDYKELLNVTYPTSGSFTAKEENEYYNIILISGGGGGGGSP
                     RDWNNGSAGYGGGGGAGGVIRAEELHLVKNASYSYSVGGGGAGGWGVMRGCCKPNKTD
                     HDRAPSGGPSSFSGSNNGETVNFYIPGAQGGDSIGCTKKKCRGGGAGGGTSGNSITRQ
                     YASAKGSVVAYGGPSGAEGSQYCSGCGVLRTRSGGKNNVDSFQVDSNNYPIKYSYGSG
                     GDGRGHGSVEYSGLAGSSGALIISQLNKLYGNGGNAGKISSRFVPSIEGHLVASIPLA
                     AKSNEAGKQVVITAYKNKTNNGILARADGGALPGTNKEAPTDGEESPWTYKHAGVAAQ
                     SCSAVTNEGAGYETVKKEVQKCKKVGCELDEDFDVEYLKQHNTKTEIEGAGAVPVLPA
                     GLGKWSSNEDAYLDMVFEALPLSNASGAKLDAYLKTLNIYYTDASKAQGLINADSSNL
                     AQFDNADEFDQTGCFYDNDRLMYTKVCVSSYSDTKDDKVWHAGRRHQTCPAAGDGQQF
                     GAGGGGGTVGDIPGVFGKGGKGAPGAIIIEW"
     gene            5754..6713
                     /locus_tag="CPT85_05195"
     CDS             5754..6713
                     /locus_tag="CPT85_05195"
                     /inference="COORDINATES: protein motif:HMM:PF08643.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23260.1"
                     /translation="MRFSVIFVYKKTTRAFCFLRLYKYFVIKNINIKFTGDIMEKFVL
                     VTGASSGLGKETALTLAQEGYKVFAGVRKQEDKEAIEACSENITAIFLDVTSEESVNC
                     AFEQIMQKTDNLYALVNNAGIAIAGPVEYIPYDILKKQFEVNVFGAIRIAQKALPLMK
                     AMPDARIVNISSMASYGIFPFVSPYCVSKRALDMFFNSLSLECKMQNLKIISIKPGVV
                     KTPIWNKSLDECDKNIEHLCEEGKKKYEQEFDFLMKNARKNNDKGLEPSDIAKLVSHV
                     LKTKNPKLSYNIGKDSIFARLMSFLPQRFVNFAVKKGLQCKLK"
     assembly_gap    6891..6893
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6930..7109
                     /locus_tag="CPT85_05200"
     CDS             6930..7109
                     /locus_tag="CPT85_05200"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23261.1"
                     /translation="MSPKKLVGIISASVGGTLLLGVLALAGLSKGSGGISKRLAKISA
                     RAKKAVFEXXXSQKT"
     assembly_gap    7086..7094
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7157..8482
                     /locus_tag="CPT85_05205"
     CDS             7157..8482
                     /locus_tag="CPT85_05205"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23262.1"
                     /translation="MADSLQASSNFSAVKDSFTYHWMDKLGMKKAADGINKYFKKITL
                     KTKNNAYKDAEYAAVDFCANLKSIAQKIKAKDPAKAKQLEDKAQQIMNEYMAGFSSQQ
                     HMARSENIWKNLDGLNTEVYNRLYKQKGGFFKNLKQYKTYITTDIIAKDRKAVFKQIN
                     SSKSRISNNISDVNSAMKQALYDLQVSVDSSNKKIVDIVKELSKNLDEAKNLAGDGEK
                     AAREKIFKQIQTNLDELSKASVLSTKDPASSKATLDKIAAMKDLIKPESYAKGLAQEA
                     MTDIKTILGKDSAEYQAAKKSMTKLNDKLNTAIKHEDITYEKLAELRVGSGPTDVLGI
                     IGPAALAAMLVANSKDKDERISRTLTGGIPILGGIGMSYYGTLRGWTGAKNLVIGLLT
                     GWLLNVVGEQTDIYAKNYRSEQSKLKNAFESLAKLQKNQNQDKQTTITG"
     gene            8564..>9853
                     /locus_tag="CPT85_05210"
     CDS             8564..>9853
                     /locus_tag="CPT85_05210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004079253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="DAB23263.1"
                     /translation="MKLFNTYSNEVEEFTPINGNKVNMYVCGPTVYDHPHLGHARCYI
                     TWDVVYRYLKFLGYDVTYCRNVTDVDDKILNKSVKENCTPDEIAKKYYDIFSDSMKKL
                     NNLKPDVEPFATKTLGDMIKMVKTLIDKGYAYEADGDVYFRVKKFPRYGYLSKQPIDD
                     LESGARVETSDIKEDPLDFALWKKDEKFGYKSPWGVGRPGWHIECSAMSKRHLADEID
                     IHAGGADLIFPHHENEIAQSECANGCRFVKYWLHNGFVTINKEKMSKSLGNFITIEGL
                     LDKYDANTIRFFILTNNYRMPVEFNDEALEAAQAGAKRLKNAANNVLAWVGKDALIDV
                     AESDEIEEFKAAMNDDFNTSKALAVLFETATKANKAKDENDKDNAIKYISILIKLARV
                     LGFDLEKVELDENQLKEKLAEIIDEFDFIEDKDIIAKA"
BASE COUNT         3026 a         2152 c         1987 g         2676 t
ORIGIN      
        1 attaaattta gcgcgatgtt tttttgtaat tacaggaaca gaagctattg ttattacgca
       61 aactaccaaa agcgtgatta atgcttctgc aagagaaaat ccgttataca ctgcggattt
      121 ttgccagtta atctttttca taagttctcc tttgcagatt atttttatga tatatctgct
      181 tacggcaggt tttaaagaga acttgacatt attcaccgtc acttacctta ccttacagaa
      241 aagcttacgg ggtctgattt ttggtgtcaa taaacttgtt tttacatttc ttaatattta
      301 tggttttcag taatatttgt tacaaaaacc ggaaattaaa acaagaacgc gcctttttaa
      361 aagacgcgtt cctgtaaggc gatagatggt attaactatt tacaaccgca atcgttttgg
      421 caatcgcatg gtgcaggttt tgcacaaggg tcacactcgc aaggttgtac aggtgctgca
      481 cagcctgtgc aagagttgca gccgaaagct acagtaatgt tttctctcgg gttaactgat
      541 gtaactctgt tgcctttggg atcaacaagg taagctactt cgtcgcctgt gtgctgcaag
      601 aggccgatgg ttcctgacag agcagttctt gttaagtcga taggagcttt aacaagcgct
      661 tttgtagaat ccattaagct tctgccggca gcaggcaatg aaccttgtaa agtttcgccc
      721 agtgtaaggc caacgccgtc agtaacgtgt tctgccgcat taccaagaga tacaatggca
      781 ccgccgactg ttcttcctac agtacctaac acaccgcctg tccagttgaa cggagcttcg
      841 attacttttg caaagaagtt aggttttttg tcgtttttaa cttgagcagt taaaacctgt
      901 tgaggaaggt tagctttgca gtcgccgttt tgaattcttt caaatgaaag tttcaaaccg
      961 cctttgcagt ttcctgtagg tctttcaact tcggtaactt taccgtaaac tttagaacct
     1021 gcagggaagc tcattccgtt aatcataacg tcttctgtgg tttttgcagc gaatctgtca
     1081 ccgatagtag cagattttgc actgatttcg tcttcgaatt tcaagcacat tgtaggaata
     1141 gtaacaactt cgtctttagc tacaaatgct gcaccgcctg tgcatccgca gtcaggagct
     1201 gtgtaagcaa cgtctttttt agagtagccc atagcgcatc ttactgcttc aagcatagaa
     1261 gctacatcag cacggcttgc atctttgcat gcttgaattt cgttagggtt aggaacatct
     1321 ttcaatgcac ctgattcaat agcttttgct acggggattt tagcccatga aggaacttta
     1381 tttccgtcgc agtatttgct taagatttct tcggctttgc agttatccat ttcgcaaggg
     1441 atacctttag ccagtgtaac catagcttct gctcttgtta caggtttgtt gggtttgaac
     1501 atatcacccg gataaccttc catcaaaccg tttgcaacag ctgtgttgat agcctgatta
     1561 gcccagtggt ctgccggaac atctttgaaa gttttgttgg ggcagccgca gcttcttaag
     1621 ttgaagccgt taacagccat agacgcgatt tctgcacgtg atacaggtag attaggtttg
     1681 aatgttctgt cagggtatcc tgcaataact ttgttttctg caagcaagtt gatatcgcat
     1741 cctgcccaga atcctgcagg aacatcttca aatgaagaag cgcctgtgat aggagaagca
     1801 ccacctgtga ttggcgggtt gaaaggaaca atggatcttt ttacaacatc catgcctgaa
     1861 ggtgtttgca tttcaatagg gcaagttcct gtagcaacag gtgctgcacc gcctgtcata
     1921 acctgattga ggtctaatgt ttgtgagcca agaacaggca gctctgctgc tgcacctgtt
     1981 gtaatacctt caccgcaagc gcatccgcaa gtcggcaaat cagataccat tacaccttga
     2041 gaaggtgcaa tcgggcatcc acagccttgt ccttcgccga taattacatt attagcctgt
     2101 gagcctactg cttgagtgtc tgaataaaca tttgcagggt atgcataatg ttgtttagcc
     2161 atagactttc cgtcaatttg agaagcgcac actgattgaa ttacaggctg gcagcaaggt
     2221 gctgctgctt cgcaagggtt gcacggttcg caagggtcaa cgggtgcaca ggtgttgcaa
     2281 gggtcgcaag gagccgcaca acctgtattg catccgcagt cagaaacagg tgcaggtgca
     2341 cacgggcata ctgctgtgtc aggtgtcaca tcagcctgac aaccgcttat cgggcaagca
     2401 gcaagtttgg acatatctaa acttgaaata tcaacattac ttgcaatccc cgagttcata
     2461 gtacctgcca tcaagccgat tgttaaggct gcggcaagtg taagtttgtt aattgtcatc
     2521 tttccctcct taattaaaca aactgaaatc ggacttccta atcgaatatt gcttatgatt
     2581 ggaatccaac ttacgataat taacatctta agccgtatta ttacggtgaa accttttaaa
     2641 aagcattacc tcaaacggtt accttcacgg gctattaaaa tttaggggaa taataaaaaa
     2701 acaaaagcct aatatatttc ccccaaaaac cccaaaaccc atattataca tggggttcca
     2761 tttgttacgc atgtagtgta taatgtatat agatatactt cacaggtcac taaaaaaaga
     2821 aatcgagtag aaaaatgtct ttcggaatta acggccccag cccccaattc ggaattcaag
     2881 aagcccagaa catgcgcaac aatggcggtg gcggaaatct tggctatttt caacgtcaaa
     2941 aaaaagacga aaaaaagaaa aaagatgaaa tagacatttt tgaattctct gacgaaaacg
     3001 atgtgtttat tcctgaggaa gaatcaaaag aagaaagcat catgcaaaaa gcatcagatt
     3061 ttataaagat gttcaaaaaa cgaagaacct cataaaaaaa gaagtcttga ttattcagac
     3121 ttcttttttg attatatatt tttaattatt tacgccagat aaaataaatt tgcctctgct
     3181 ttttgcggtc gaatttggcc tgtaccgtta tacggcccga tgaatcttct catatcagca
     3241 agttcattat ctacagcagt gccgccttgc agaccgccaa acatttgccc gccggttttt
     3301 tgcacaccgc ctgttgcctg tgtaccgcgt gcgcctatag cacctatctg ctgtattggt
     3361 tgttgaaaca tattaatttt tggaatttca aatgccataa atttataatt gttcctttaa
     3421 ctaaaactct atatatagat aaaaacatgt gaatcaaata aattgccaat tttgtaacaa
     3481 agtttacaaa agtttaaaaa gataaaaaaa gcccctgcaa aagcaagggc aataagtact
     3541 gttttagaaa acatttctcg tgaataagaa atggacctgt ttaccattcg atgataatag
     3601 cacccggcgc gcctttgccg cctttgccaa atacacccgg gatatctccc acagtgcctc
     3661 cgccaccgcc ggcaccgaat tgttgaccgt cacccgcagc aggacaagtc tgatgtcttc
     3721 tgcctgcatg ccagactttg tcgtcttttg tgtctgagta agaagataca caaacctttg
     3781 tatacatcag tctgtcgtta tcataaaaac aacctgtctg atcaaattca tccgcattgt
     3841 caaattgtgc aaggtttgag ctgtctgcat ttatcaatcc ctgtgctttt gacgcatctg
     3901 tataatatat attcagtgtt tttaaatatg catccagctt ggctccggaa gcattggata
     3961 aaggcagagc ctcaaaaacc atgtcaagat aagcgtcttc atttgagctc cacttgccaa
     4021 gaccggcagg cagcactgga actgcaccgg ctccttctat ttcggttttt gtattatgtt
     4081 gcttcaaata ttcaacatca aaatcttcat ccaattcaca accgactttt ttgcattttt
     4141 gtacttcttt tttaacggtt tcatatcccg caccttcgtt agtaacggcg ctacagcttt
     4201 gagccgcaac acctgcgtgc ttataagtcc atggcgattc ttcaccgtca gtcggagctt
     4261 ctttgtttgt acctggcagc gcaccgccat ctgctcttgc taatattccg ttatttgttt
     4321 tgtttttgta cgcggttatt acaacctgtt tacctgcttc atttgattta gcagcaagag
     4381 gtatagaagc aacaaggtgg ccttctatag acggaacaaa tctggacgag attttaccgg
     4441 cattaccgcc gttgccgtac aatttattta attgagagat aatcaatgct cctgatgaac
     4501 ccgccaaacc ggaatattca acgcttccgt gtccacggcc gtcaccgccg gaaccgtatg
     4561 agtatttaat cgggtaatta ttggaatcca cctggaaaga atcaacatta tttttgccgc
     4621 cgctacgggt acgtaataca ccgcatccgc tgcaatattg gctgccttcg gcaccgctcg
     4681 ggccgccata tgctacaact gagcctttgg cagaagcata ctgtctggtg atactattac
     4741 ctgatgtacc accgccggct ccacctccgc ggcatttctt tttggtacaa ccaatagagt
     4801 caccgccttg tgctcccggg atataaaaat tgactgtttc accattgttg gaaccgctaa
     4861 aagaggaagg tccgccgctt ggagctctgt cgtggtctgt tttgttaggt ttacagcacc
     4921 cgcgcattac gccccagccg ccggcaccgc cgccgccaac ggaatatgaa tacgaagcat
     4981 ttttaacaag atgcaactct tcagcacgga ttactccgcc tgctccgcct ccgccgccgt
     5041 agccggcaga gccgttattc cagtcacgcg gtgaaccgcc gccaccaccg cctccgctga
     5101 tgagaattat attataatat tcattttctt cttttgccgt aaaagaacct gatgtggggt
     5161 aggtgacatt taacagctct ttgtaatcag aggtgccgtc acgtccgccc gaaccgccgc
     5221 ctataacggt tacgttaaag tttcttgctc cgggtggcgg tgtgaattta cactggaagc
     5281 gctccttgga aagaagctgg ccatctgagt tataccagct tacggtatct ttgtagccgg
     5341 aatttgtgac ttcgtgccat gtgtcagggt cttcttcttt gcctatcgca gctctgctgt
     5401 agtattctac atagtttcct gcgctattta atgtacataa atattttccg tgtgagttat
     5461 ccatattacg tctttttttg gtaattacag gaacactcgc aagaacaata atacaaacta
     5521 tcaaaagggt gattaaagct tcagccatcg aaaacgcctt agcctttcga cgcatgagtg
     5581 taataaatct tttcatatgt tctcctaata cagtattctt tcatgatata acgggtgtcg
     5641 gcagttttta aggagaactt gacataaccc accgtcactt accttacctt acagaaaagc
     5701 ttacggggct tgatttttgg cgtcaagaaa ctcgtattta catttcttta tatttgcgat
     5761 tttcagtaat atttgtttac aaaaaaacaa cccgtgcatt ttgttttttg agactttata
     5821 aatattttgt gataaaaaat ataaatatta aatttacggg agatatcatg gaaaaatttg
     5881 ttttggtaac aggtgcatcc tccggtctgg ggaaagaaac tgcgctcacg cttgcacaag
     5941 aagggtataa agtctttgcg ggtgtaagaa aacaggaaga caaagaagca attgaggctt
     6001 gtagtgaaaa cattacggca atttttctcg atgtaacaag cgaggagagt gtaaactgcg
     6061 cgtttgagca gattatgcaa aaaacagaca acctttatgc acttgtaaac aacgcaggca
     6121 ttgccattgc agggcctgtt gaatatattc cgtacgatat tttgaaaaag cagtttgaag
     6181 taaacgtctt tggtgcgata cgcatagcac aaaaggcttt acccttgatg aaagccatgc
     6241 ctgacgccag aatagtaaac ataagctcca tggcaagcta cggaattttc ccgtttgtat
     6301 cgccttattg tgtatcaaaa cgcgcgctgg atatgttttt caactcgctg tcactcgagt
     6361 gcaaaatgca gaatctcaaa attatctcaa ttaaacccgg cgttgtaaaa accccgatat
     6421 ggaacaaatc gttggatgaa tgcgacaaaa acatagaaca tttgtgcgag gaaggcaaaa
     6481 agaaatacga acaagagttc gactttttga tgaaaaacgc aagaaaaaac aacgacaagg
     6541 gactggaacc ctctgatatt gcaaaacttg tgtcacatgt attaaaaaca aaaaacccga
     6601 aactgtccta caatataggc aaagactcga tttttgcaag gctgatgtct tttcttccgc
     6661 aaagatttgt aaatttcgct gttaaaaaag gtctgcaatg caaacttaaa tagcaatttt
     6721 taccttcttc atgtttttaa ttacatgtag gcaggtaaat tatatttttt tgcaggttat
     6781 gtcagtaaat ttttctaaca ataacgtata taaaaacttt tttacgcaaa caggacaata
     6841 cagctctgtt tcgaaccctg acaaaaaaaa ctcaactgct acaatcgctt nnnacctaca
     6901 acggccaaaa cacgcaggaa aaagaaaaaa tgagccccaa aaaacttgtg ggcataataa
     6961 gcgcatctgt cggcggaacg cttcttttag gagtgcttgc actggccgga ttgtccaaag
     7021 gttcgggcgg aatttccaaa cggcttgcaa aaatctctgc acgtgcaaaa aaagccgtgt
     7081 ttgagnnnnn nnnnagtcaa aagacctgac tttcctccaa aaagttaagc tcaaaacagg
     7141 caaaagcata cagtttgtgg cagacagtct tcaagcaagc tccaacttct ctgccgtaaa
     7201 agacagcttt acttaccact ggatggacaa gctgggtatg aaaaaagccg ctgacggcat
     7261 aaacaagtac ttcaaaaaaa tcactctcaa aaccaaaaac aacgcataca aagacgccga
     7321 atacgcagca gtagactttt gtgcaaacct gaaaagtatt gcacaaaaaa tcaaggccaa
     7381 agaccccgca aaagccaaac agctggaaga taaagcacag caaatcatga acgaatacat
     7441 ggcagggttc tcgtcccaac agcacatggc acgttccgaa aacatctgga aaaacctcga
     7501 cggtcttaat acagaagtgt acaacaggct ctacaagcaa aaaggcggat tctttaaaaa
     7561 cctcaaacaa tataaaactt acattacaac agatataatt gcaaaagaca gaaaagctgt
     7621 attcaaacaa atcaactcgt ccaaatcaag aatttccaac aatatctccg acgtaaacag
     7681 cgcaatgaaa caggctctgt acgatttaca ggtcagcgtg gactcttcaa acaaaaagat
     7741 tgtggacatt gtaaaagagt tgtccaaaaa ccttgatgag gcaaaaaatc tggcgggcga
     7801 tggcgaaaaa gctgcaagag aaaaaatctt taaacagatt caaacaaacc ttgatgagct
     7861 ttcaaaagct tctgtcttat caaccaaaga ccctgcttct tctaaagcaa ctctggataa
     7921 aattgcagcc atgaaagacc tgattaaacc cgaatcttac gcaaaaggtt tggcacagga
     7981 ggctatgaca gatattaaaa caatcctagg caaagactct gccgaatatc aggcagcaaa
     8041 aaaatctatg acaaaattaa atgataaatt aaacactgca ataaaacatg aagacataac
     8101 ttacgaaaaa cttgcagaat taagagtggg ctcaggcccc acagacgtac tgggcattat
     8161 cggccctgca gcactggcag caatgctcgt tgcaaactca aaagacaaag atgaaagaat
     8221 ctcaagaact ctcactggcg gcatacctat cctcggcggt atcggaatgt catactacgg
     8281 cacattaaga ggctggacag gcgccaagaa ccttgttata ggtcttttga caggatggct
     8341 gctcaatgtt gtgggcgaac agacagatat ttatgccaaa aactaccgct ctgaacagag
     8401 caagctgaaa aatgcctttg aatcacttgc aaagctgcaa aaaaaccaga atcaggataa
     8461 acaaactact atcacaggtt gatattaccc gacgggtact tttaacatgc cttgatttga
     8521 tgtaatataa tttatattcg agcaaatcag gtagtttatt atgttgaaat tatttaatac
     8581 ttactctaac gaagttgaag aatttacccc cattaacggc aataaagtga acatgtacgt
     8641 ttgcggcccc acagtttatg accaccctca cctcggccat gcacgctgct acattacgtg
     8701 ggatgttgtt tacagatatc ttaaattcct cggatacgat gttacttact gccgcaacgt
     8761 gacagatgtt gacgacaaaa ttttgaacaa atccgtcaaa gaaaactgca cgcctgatga
     8821 aatcgcaaaa aaatattatg atattttttc agactccatg aaaaaactca acaaccttaa
     8881 acccgacgtt gagccttttg caacaaagac attaggcgac atgataaaaa tggttaaaac
     8941 cctcattgac aaaggctatg cctacgaagc tgacggagac gtatacttca gggtcaaaaa
     9001 attcccgaga tacggatact tgagcaaaca accgattgat gaccttgaat caggcgcaag
     9061 ggtagaaact tccgacataa aagaagaccc gctggacttt gctctgtgga aaaaagacga
     9121 aaaattcggc tacaaaagcc cgtggggtgt gggcagaccg ggctggcaca ttgaatgctc
     9181 ggccatgagc aaacgccacc ttgccgatga aatcgatatc cacgcaggcg gtgcggattt
     9241 aatcttcccc caccacgaaa acgagattgc tcaatccgaa tgtgcaaacg gctgcaggtt
     9301 tgtaaaatac tggctgcaca acggttttgt tacaatcaac aaagaaaaaa tgtcaaaatc
     9361 actgggcaac tttatcacaa tcgaaggctt gctcgacaaa tacgacgcaa acacaatcag
     9421 gttctttatc ctgacaaaca actacagaat gccggtagaa tttaatgacg aagcactcga
     9481 agctgcgcag gcaggtgcaa aaaggctgaa aaatgccgca aacaacgtac ttgcatgggt
     9541 aggcaaagac gcgctcattg acgttgcaga gtcagacgaa attgaagaat tcaaagctgc
     9601 aatgaatgat gattttaaca cttcaaaggc gcttgcagta ctgtttgaaa cagctacaaa
     9661 agcaaacaaa gccaaagacg aaaacgacaa agataacgca ataaaatata tttcaatact
     9721 gataaaactt gcccgcgttc ttggttttga ccttgaaaaa gttgagcttg acgaaaacca
     9781 gctcaaagaa aaactcgctg aaatcattga cgaatttgat tttatcgaag acaaagatat
     9841 aatcgcaaag gca
//
LOCUS       DABS01000126            3870 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_20489, whole genome shotgun sequence.
ACCESSION   DABS01000126 DABS01000000
VERSION     DABS01000126.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3870)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3870)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3870
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            170..964
                     /locus_tag="CPT85_05215"
     CDS             170..964
                     /locus_tag="CPT85_05215"
                     /inference="COORDINATES: protein motif:HMM:PF01464.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23245.1"
                     /translation="MIKKINGVQLLRKIPMKKAAKKCVFGLELAGALGGSGIMKNDTL
                     ALEKVLNTHVPELKPREHTTDWFSAQQKLAEINRSIMIRKADSLLRKQQKAVVTKIMT
                     EDKNFTHPENKEKIAQNIVKVAREYDLDPVHIACIAKEESHFTEDIISKNGKGMMQIT
                     SITVKDMFLRPDFYHKKLKNITSKYKSPKQLYNDLQTNSLLNLRIGALLYEARLRESG
                     GNIRTALVNYNSSSIKYAYASRIMKDINKYEKLNQQNAIHKVLASK"
     gene            complement(1022..>1914)
                     /gene="fba"
                     /locus_tag="CPT85_05220"
     CDS             complement(1022..>1914)
                     /gene="fba"
                     /locus_tag="CPT85_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013431957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fructose-1,6-bisphosphate aldolase, class II"
                     /protein_id="DAB23247.1"
                     /translation="GAYNVNNMEILQAIAEAAEETRSPIILQVSAGARKYANQTYLVK
                     LVEAALATTTVPIALHLDHGADFEICKACIDGGFSSVMIDGSRFSFEENVAVTKKVVE
                     YAHERGVSVEAELGKLAGVEDDVNVDAKDAKYTNVKEAVEFVKQTGCDSLAIAIGTSH
                     GAYKFSGEAKLDFDRLKEIKDALKEAGFGDYPIVLHGSSSVPQELVEKCNKYGGNLPN
                     AQGVPEDMLNYASKHGVAKINIDTDLRLAMTSTIREFFVEHPEKFDPREYMGPGRTAV
                     KEMVMHKMRDVLGTAGHADD"
     assembly_gap    1915..1934
                     /estimated_length=20
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2136..3743
                     /locus_tag="CPT85_05225"
     CDS             2136..3743
                     /locus_tag="CPT85_05225"
                     /inference="COORDINATES: protein motif:HMM:PF13185.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23246.1"
                     /translation="MENLSDKITTLQKNFYDLNSLFELSIIATQADSIEDLIEKVTGF
                     ITEALSIENVRFFINHDKVYYMVASQKSDDQEFFQFENDEEGFWEVLNKNEFIKVSDD
                     AGRPIYRSFWEKYGLDNLHSSYFKLFQKDSTPYFICSIGTKTDGTNFSSEDLHYLSKV
                     FNYIGPILIKYIKRRDQENDLKKLQKSLHNISILYNISQAVNFIDDLKRLLRVILNKA
                     LETIDAEKGSLMLYNFAENVLQTKVVYGLADKNLETEINNGLIECSKIKVGEGIAGTV
                     FVEKKSIISNLGQNDPRFIDNGQELNVNSLLCVPLIAKGEPIGVINITNKLNGKLFNK
                     QDLEFIEALANQAAIAIDNAKLYELATKDGLTKLYIYRHFYTLLENEIKRSSRYNHEM
                     TLLMMDIDNFKSVNDTYGHPVGDQVLREIASCIAQTVRKIDIASRYGGEEFTVILPET
                     NITDAKIIAERIRKNISNIKINVKDDIYICPTVSIGMSEYPSCALDEQTLIELADVAL
                     YNAKNNGKNCICEYNPNTGCTLLPRGE"
BASE COUNT         1374 a          712 c          661 g         1103 t
ORIGIN      
        1 tatattttta tatttttcat ccataatgtt taattatatg tgctttattc aataaaaaca
       61 acttttttaa caaataaaat cactcttatg tttatattgc attaacaaaa ccttggtgct
      121 aaaattttta ggctaaaaaa aatcacttaa acaaagagac attaataaca tgattaaaaa
      181 aataaatggg gtacagctgc taagaaaaat ccccatgaaa aaagcagcaa aaaaatgtgt
      241 attcggcctt gagctcgcag gtgcacttgg tggcagcggg attatgaaaa atgatacact
      301 agcacttgaa aaagtattaa atacccatgt ccctgagtta aagccgcgag aacacaccac
      361 agactggttc agtgctcaac aaaaacttgc ggaaattaat cgttcaataa tgataagaaa
      421 agctgattcc ctgttaagaa aacaacaaaa agctgttgta acaaaaatca tgacagaaga
      481 taaaaacttt acccaccccg aaaacaaaga aaaaattgca caaaatattg taaaagtagc
      541 aagagaatat gatcttgacc ctgtgcacat tgcttgtata gcaaaagaag aatcacattt
      601 tacagaagat ataatatcaa aaaacggtaa aggtatgatg caaataacaa gcatcactgt
      661 taaagatatg tttttgagac ctgattttta tcacaaaaaa ttaaaaaaca taacatcaaa
      721 atataaaagc cccaaacaac tttataacga tttacagaca aactctctgc tcaatctcag
      781 aataggagcg ttgttgtatg aagcacgttt gagagagtcc ggcggcaata taagaaccgc
      841 tcttgttaac tacaacagct ccagcatcaa atatgcttat gcaagcagga taatgaaaga
      901 cattaacaaa tacgaaaaac taaaccaaca aaatgcaata cacaaagtgc ttgctagtaa
      961 ataataaaaa aaaccggttt gaaaattcaa aacggttttt taagtttatt tgtattaaaa
     1021 cttagtcatc agcgtgaccg gctgtaccca aaacgtctct cattttgtgc ataaccattt
     1081 ctttaacagc agttctgccg ggtcccatgt attctctcgg gtcgaatttt tcagggtgtt
     1141 ctacaaagaa ttctctgatt gtagaagtca ttgccaatct caagtctgta tcgatgttga
     1201 ttttagcaac gccgtgttta gaagcatagt taagcatatc ttcaggtacg ccttgagcgt
     1261 taggaaggtt tccgccgtat ttgttgcatt tttcaacaag ctcttgagga actgaagaag
     1321 aaccgtgcaa tacaatcgga taatcgccaa aacctgcttc tttcaaagca tctttgattt
     1381 ctttgagtct gtcaaagtct aatttagctt cgccagagaa tttgtaagca ccgtgagatg
     1441 taccgatagc aatagctaaa gagtcacagc ctgtttgttt tacaaattca acagcttctt
     1501 taacgttagt gtatttagcg tctttagcat caacattaac atcgtcttca acacctgcaa
     1561 gtttacccaa ttcagcttct acagaaacgc ctctttcgtg agcgtattca acaacttttt
     1621 tagtaactgc aacgttttct tcaaacgaaa atcttgaacc gtcaatcata actgatgaga
     1681 aaccgccgtc gatacaagct ttacaaattt cgaaatcagc accgtggtct aagtgtaaag
     1741 cgataggtac tgtagttgta gccaatgcag cttcaacaag tttaacaagg taagtttggt
     1801 tagcatattt tcttgcacct gctgaaactt gcaaaataat aggtgagcga gtttcttcag
     1861 cagcttcggc aatagcttgc aaaatttcca tgttgtttac gttgtaagca ccgannnnnn
     1921 nnnnnnnnnn nnnntgaaca tttcgtttgt tccaactaat tttctttctg ccattttttg
     1981 agttctcctc ttttgtactc atgcattgcg catattcaac accaaaatag cgcaaaaaaa
     2041 gatgttttac aagaaaaata ttttaattta aacacaaaat aaccactcta tttaattgat
     2101 tgaattattc taaaaattct aataaaatag ttattatgga aaatctgtcg gataaaataa
     2161 ccacactaca aaaaaatttc tatgacctta acagcctgtt tgaattaagc attatcgcca
     2221 cacaggctga ctctattgag gacttaatag aaaaagtgac aggttttatt acagaagcct
     2281 tgagcattga aaatgtcaga ttttttatta accatgacaa agtttattac atggttgcaa
     2341 gccaaaaatc tgatgatcag gaattttttc agtttgaaaa cgatgaagaa ggtttctggg
     2401 aagttttaaa caaaaacgaa ttcatcaaag tatctgatga tgccggccgt ccaatatacc
     2461 gttcattctg ggaaaaatac ggactggata accttcacag ctcttatttt aaactttttc
     2521 aaaaagattc aacaccatac tttatctgct caatcggtac aaaaacagac ggtacaaatt
     2581 tcagcagcga agatttgcac tatctttcaa aagtttttaa ctacattggc ccgattctta
     2641 tcaaatacat caaaagaaga gatcaagaaa acgaccttaa aaagcttcaa aaatcactgc
     2701 ataatatttc aattttgtac aatatttcgc aggctgttaa ttttattgac gacctcaaac
     2761 gacttttgcg tgttattttg aataaagcgc ttgagacaat tgacgcggaa aaaggctctt
     2821 taatgcttta caactttgca gaaaacgttt tgcaaacaaa agttgtttac ggcctggctg
     2881 acaaaaatct tgaaacagaa atcaacaacg gtcttataga atgctcaaaa atcaaagtgg
     2941 gcgagggcat tgcaggtacg gtatttgttg agaaaaaatc cataatctca aacctcggcc
     3001 agaatgaccc gagattcata gataacggac aggagctcaa tgttaattcg cttttgtgcg
     3061 tgcctttgat tgccaaaggc gagccgatag gggttatcaa cattacaaat aagctaaacg
     3121 gaaaactctt taacaaacag gatttagagt ttattgaagc acttgcaaat caggcagcta
     3181 ttgccataga caacgcaaaa ttatacgagc ttgcaacaaa agacggtctt acaaagttat
     3241 atatttacag acatttctat acattgcttg aaaacgaaat taaacgttcc tccagataca
     3301 accatgaaat gaccctgttg atgatggata ttgacaactt caagagcgta aacgacacct
     3361 acggccaccc tgtaggcgac caggttttaa gagaaattgc cagctgtatt gctcaaacag
     3421 tccgtaagat tgacattgct tcaagatacg gcggtgaaga gtttactgtt attcttcctg
     3481 aaacaaatat tacagacgca aaaatcattg cagaaagaat aagaaaaaat attagcaaca
     3541 taaaaatcaa tgtaaaagac gacatctata tttgtccgac agtcagtatt ggtatgagtg
     3601 aatacccgtc ttgcgcactt gatgagcaaa ctctgattga gcttgcagac gttgctttat
     3661 acaacgccaa aaacaacggc aaaaactgca tatgcgaata caaccccaac acaggctgta
     3721 ctttgctgcc aagaggggaa tagtatacaa aaagattagc ccgtgtgtgg catagttcat
     3781 cttctgattt tatttaaaat tgtcaaataa gaaataaaat cgggaggata aaatgaacaa
     3841 atttaagata ttaggagttt gtgctctggc
//
LOCUS       DABS01000127           30378 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_2812, whole genome shotgun sequence.
ACCESSION   DABS01000127 DABS01000000
VERSION     DABS01000127.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 30378)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 30378)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30378
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..377)
                     /locus_tag="CPT85_05230"
     CDS             complement(<1..377)
                     /locus_tag="CPT85_05230"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="DAB23191.1"
                     /translation="MLIIMNPSATDEQIQDVVSFIKRKNFDAHVSKGEVQTVIGAVGG
                     KIVDPRDIELFEGVKEVIRISSSYKLAGRMFKPEDTIIEVNGVKFGGDNIGMIAGPCT
                     VESYEQMDQTAKQLSAMGVKILRG"
     gene            538..921
                     /locus_tag="CPT85_05235"
     CDS             538..921
                     /locus_tag="CPT85_05235"
                     /inference="COORDINATES: protein motif:HMM:PF01276.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23192.1"
                     /translation="MLKAKTKTHKFRKIADDLRSDVKAPLVEALEKFYKNPMVQFHIP
                     GHTAGRAAYGPFKKLIGNKALLLDTTDEFDNLGTLHPSTGPIKEARALAAKAFGAKET
                     FFLLGGSTIGNLTLAMCMSKXXSNC"
     gene            812..1987
                     /locus_tag="CPT85_05240"
     CDS             812..1987
                     /locus_tag="CPT85_05240"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01276.18,HMM:PF03711.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23193.1"
                     /translation="MLQRRSAQRKPSFCWAAPQSATLPLQCVCPKXKVIVNRNCHRSI
                     LTGMIISGAEPVWILPEKLNEWSLWGEIEPREIEKALKENDDVALVWITNPTYEGVVS
                     NVKAIADICKKYDVPLVVDEAHGCLWNFNKNLPESSLHLGADAVVHSLHKTGGSMSQS
                     SMLHITQGSKFDPDEIERTLQLLQTTSPSMLLMASLDAARANLESKHGKKQLNRAIQH
                     AKYVRKRLHKIEGVHVLEATENYNQDVTKVFVRVDGLSGKRLESILEIDFDIEVESAS
                     DIGVLLLINIGNTKQEIQYLVNAFEKIAHAQYSDIYYIENRKHMPMLTPQIVMNPREA
                     YYSEKETISKEQAVGRISAEVIAECPPGISILLPGELITQEHMPYLNEYKYLEVIKK"
     assembly_gap    906..907
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2020..2784
                     /locus_tag="CPT85_05245"
     CDS             2020..2784
                     /locus_tag="CPT85_05245"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23194.1"
                     /translation="MYLVSNFFNASIRRPVFRGKTSAENIQSSEFSGIKNLESDIFVP
                     QNTLKRPTEFGTVSYLKDNSFEELRFKKPLTLAQALDTVQKADDKYHLCRYGVVKSGF
                     TLNEFKESFEMRFKNMKFTGFLGSGYSALALENQDGNIVKLCTDDHFAMRNKTEDFDA
                     QVLKKGTIKKQYFYYIQKKYSKKGVTQHDVDLMEKKILSKGYIANDLYEGQIGKDKDG
                     KIYLIDPECAVDPAKKAEINEKTESFIQECIRNGWM"
     gene            2871..3167
                     /locus_tag="CPT85_05250"
     CDS             2871..3167
                     /locus_tag="CPT85_05250"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23195.1"
                     /translation="MFCVVVIACAFLAPVLAHSNFAPAANVLYDFLHRLCKMHGTNIF
                     TILHHPIGICARCIGSYISAAIILYTYLHKFKMDKIIFIIIGTLAFGEIVAEXX"
     assembly_gap    3160..3163
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3604..4458
                     /locus_tag="CPT85_05255"
     CDS             3604..4458
                     /locus_tag="CPT85_05255"
                     /inference="COORDINATES: protein motif:HMM:PF13646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23196.1"
                     /translation="MTISVNSRKKQAKKSFDELLNDLRTSNSEKVRYNAARILGEIGD
                     SQAVEPLIDVLKNDKNGSVRLYAARALGELGDVNATIPLIESLREDRNVDVRVRAARA
                     LGRLGGKEVVEPLVEALNDENPQVCITATDALIEIGDVATDALMESLDHEKVNVRCDA
                     TRALGEIGNPKAVDKIITMLKDEWVNVRIYAVTSLGKLSDKKAVPALIEVMQNKKEND
                     LVRAGAAAALGVLRDQRALMPLRELIMAADELGELEDTALKSFKKIMAANWQAIPGAA
                     PQKKTANA"
     gene            complement(4559..4984)
                     /locus_tag="CPT85_05260"
     CDS             complement(4559..4984)
                     /locus_tag="CPT85_05260"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23197.1"
                     /translation="MDKYGFPIVLFLIIFGLYSLFKPTVYNTYVDQDYLKSLRTCKTH
                     VSKGKLPQPNNISSMSIVRGPKQGKCVIQTINEFSKEKLSYVCSLNKYQLADYIKVRE
                     SRVFTMQGYNDTILLKKFIKEGACKTYKFEDNKWVVTSK"
     gene            complement(4988..5590)
                     /locus_tag="CPT85_05265"
     CDS             complement(4988..5590)
                     /locus_tag="CPT85_05265"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23198.1"
                     /translation="MDSYNFLKPSNKLEIILDNKSYFCTIYYVENDKLTVFFDKQTEL
                     PEKEIEINIYAQDGVYNATSRILSSNYLNETTFYMLSFPSNIKHSQRREYLRADIETD
                     FAMTVEFEGTQVDRIIATTKNICAKGLAFISDKQMNAYTKLDIELFLAGKQINTHAEL
                     VYSNPIRINNSFKFLTAVTFTDISKEEMNFITLQCMKYKG"
     gene            5683..7209
                     /locus_tag="CPT85_05270"
     CDS             5683..7209
                     /locus_tag="CPT85_05270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014546988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="DAB23223.1"
                     /translation="MTRQPFFYDITLRDGNQSLKKPWNLKEKEFIFDKLVKFGVQAVE
                     AGFPAASDMDFEAVKRLAQIADDNLVISGLARAVEHDIETAVNAISFSKKPRLHTFIA
                     MSPFNMKYVLNKKPQEVRKTAVEAVAFAKEKIQKVSKQGEVQFSVEHFGDCMENLDYV
                     IDTLKDVVKAGATVINLPNTVERTRVKTFVDMVEKVYHALPKDIMIAVHCHNDLGMAT
                     AATIESYFAGATQLECSLNGLGERAGNTNMYEVAVGLHNSGVDVPLNLGEIYELALVV
                     SDMSKVEIPEKAPLIGPEALAHRSGIHQDGAVKTKDMEKGAYRPIHPTLIGRKDDEKI
                     GFTSQSGKTAVFEIISDAGYPITIQEAVRITPIVKEAAQKVGELPARNIIDIYFNEVF
                     NVKGDFRLVAFEKLAENMFNLKFFHKTEFFDMNAQGNGPLDACLSALKQAGYPQKLVD
                     YEQYAVDGRIFGSGATAMTVIHFEDLDGRTILARGKDESTLKANVKAIFNGLNLMSKN
                     "
     gene            7256..8224
                     /locus_tag="CPT85_05275"
     CDS             7256..8224
                     /locus_tag="CPT85_05275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015175495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="DAB23199.1"
                     /translation="MQIFVYILKRLLQAIPLLFLVSIISFFIIRLSPVDPLGELRLNP
                     SISQETLKSEQQRLGLDKPKIVQYGLWLKSFLKGDLGVTVTGEKVSTKLWERIPNTLL
                     LTTVVILLTWLVGIPLGIYAALNWKKPVDRILTVVTSIGMAIPSFFFALLLLIFAVKT
                     GWFPTGGLTSYNFSNLGPAGKVIDIAHHLVLPVIVLFTISLSGLQRQMRGNLLDVLGS
                     DYVKFARAKGLSENKVVYKHALRNAINPMVTLLGFEFASLLSGAALTEYVFQYPGLGR
                     LILEAVMKSDINLVMASLMMGTIMLVLGNLLADILLKLVDPRVSVS"
     gene            8224..9309
                     /locus_tag="CPT85_05280"
     CDS             8224..9309
                     /locus_tag="CPT85_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012674697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="DAB23200.1"
                     /translation="METKNLFKKLFGSQIFKDKYASTALVVLLILYLGILFADFLAPY
                     SKEFSDRHRAYVPPSKIFTIDENGKLSRPYTYNYKRYFNPEELKITYKLDRSKKYYLK
                     FFSKGEKYKFLGLIPMERHLVTVDPDGRLFLLGTDINGRDIFSRILFGGRISLTIGFL
                     ALFISFPLGMLYGGISGYLGGVADNLMMRVSEAIMSIPSFYLLIILAAILPTNMTSIQ
                     RFTLITVILALIGWAGFSRVVRGMVLSIKNQEFVQAAESIGASKLRIIVKHLLPQTLS
                     YVIVAMTLSVPSYILAESGLSFLGLGIQQPDASWGNMLKEAQEYVNIIYRPWLLTPGF
                     LIFIAVLSFNLIGDTIRDILDPKSKVR"
     gene            9376..10043
                     /locus_tag="CPT85_05285"
                     /pseudo
     CDS             9376..10043
                     /locus_tag="CPT85_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012882023.1"
                     /note="frameshifted; incomplete; missing stop; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    9645..9646
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    10044..10076
                     /estimated_length=33
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            10111..11346
                     /locus_tag="CPT85_05290"
     CDS             10111..11346
                     /locus_tag="CPT85_05290"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23201.1"
                     /translation="MIALLVALFLAAVATGCSKIVAEHHARMLARISNTTKDNEMIAY
                     LITKYTEQAQKNPGDYSIHVRLGNLYELMFDYKHAEEQYKTAIDKSPYGVYSSYLGLA
                     NLYLKMGKYNKALRIVKRLKNTDHKPLLIAKGDFYMNLGDLLWQKNKYNDAVKQYKIA
                     FFYYKKVDSNKKDSAVVGILDCYNKIADEDFKHHSILKAIESLETALLYKETPIMYYK
                     LAILYKDVDPVVANKYMEKTYALDPGIINFDIYEEILIKLVKQYYSEGKDVETDLYKH
                     KLKSIKTFQKRYVISEKDVTINIEKLEVKNNLFKTKQTVKVKFKIENTSKHDFNTLFV
                     IAKLRYDNKSKEIFNHKFYTKKSPLKSRSESPSYTFKYTYSDKDEIYTAEKVNLDFYA
                     GKKENMRKIPVYSVELQRF"
     gene            11429..12265
                     /locus_tag="CPT85_05295"
     CDS             11429..12265
                     /locus_tag="CPT85_05295"
                     /inference="COORDINATES: protein motif:HMM:PF01553.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23202.1"
                     /translation="MGNLLHKENQQLYSDVPPRKLRNIDEKFRAAKPTPFWRWVADQF
                     FYNMLENRFFSLKIKNKENYDKRDPQFANIIYAPHNNWWDGIVGYNLCRRIFNTDIRM
                     MIEEMNRFPILARAGAFPVNKKSPQASMRALQYSVDELCDNKKSLWIFPQGIIRPPMY
                     RPIEFQTGLAYIAKNVAKKAGGVNLIPVAVNYPFLREDKPEVLCEVGEPIVLTDYNFD
                     RKEFTHRVEKNFEALCDKQFEDIRHGNIEDYEYLYKQKLKWYKKLEKRLKKIDMPKGS
                     GV"
     gene            complement(12262..12798)
                     /gene="hpt"
                     /locus_tag="CPT85_05300"
     CDS             complement(12262..12798)
                     /gene="hpt"
                     /locus_tag="CPT85_05300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009663595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="DAB23203.1"
                     /translation="MTDRKVEDLKILFSQQQIEKRTRELADEINNTFGTIEDLTIICV
                     LKGSSMFFCDLSKYLKMPVKMEFIRVSSYGNEKTSSGHVQAMDLTLPNLEGKNALIVE
                     DIIDTGCTMKFLLEMLCRTHKPKNLKVVTLLNKKAARKTDIEPDFYGFEIDDKFVVGY
                     GLDYEGYMRNLPYVGYFD"
     gene            complement(12805..14160)
                     /gene="tilS"
                     /locus_tag="CPT85_05305"
     CDS             complement(12805..14160)
                     /gene="tilS"
                     /locus_tag="CPT85_05305"
                     /inference="COORDINATES: protein
                     motif:HMM:PF11734.6,HMM:TIGR02432"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="DAB23204.1"
                     /translation="MINKVKNFLKKHGLNDSNKTFVVGFSGGYDSMCMLDILYRISEK
                     SGFKLIALHLNHNWRGREAEIEQENCERYCKEKNIQIYTETLPVGTPKTETAAREKRQ
                     EFFKKCYKKFNADGLFLAHTKSDNTETILYRLSKGTGVKGLCGILENSKLDFCDVYRP
                     LMPFSRKDIVRYCTVNKLVPNNDSSNFDTKYARNFLRHQIISELKTINPKIEDVILNL
                     SKIAISEQNIIKEYLSKIKTQVTDKKEGFFVTEKFVELSQDVQNKFILDFLIEHNLDY
                     DSKKVDEIYEFIQKNANRKSGKTLSLTKDLWLFVSKEKICTIEDLEPAKIKDEIKIDK
                     CGTYVFHDKIFKLEEYKDSKMPVFPHSNEPAAYVQIDDKIDFRLRTRLHGDVIQPFGM
                     KGTMKLKKLFINKGIEKFKRDEILLLCKGQEIFWAAGVCVSEKLRADKLPTHMLKIED
                     R"
     gene            complement(14197..14613)
                     /locus_tag="CPT85_05310"
     CDS             complement(14197..14613)
                     /locus_tag="CPT85_05310"
                     /inference="COORDINATES: protein motif:HMM:PF00528.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23205.1"
                     /translation="MIALIIVSSWKLIGYNMVIFLSGFSAINNNIYEAAKIDGASPLR
                     IFFTITLPLLSPTIFFVLVITTISSFQVFDLIYLMTQGGPMDSTNVLVYWIYKNAFEF
                     FNIGQASAGAYILFLIILFLTIIQWKTRKMWVFNED"
     gene            complement(14652..15017)
                     /locus_tag="CPT85_05315"
     CDS             complement(14652..15017)
                     /locus_tag="CPT85_05315"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23206.1"
                     /translation="MFLAPALLGTLIFIVLPVIFSFYLSFCSWDLLSDIRFVGLENYK
                     ELLTSPSFFLIIKNTFVFAISTALIALVIPLVLAAVLNNKIRGTEFFKTAYFLPFITP
                     MIVAAIVWEWIFDPNIGXF"
     assembly_gap    14659..14660
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            15021..15467
                     /locus_tag="CPT85_05320"
     CDS             15021..15467
                     /locus_tag="CPT85_05320"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23207.1"
                     /translation="MHKSVIKKLFHKTIITEFDKINMCRFWTLAEFYEIIRYIEKHNR
                     GVSMTETLDFRAFGKNDIRGIYGEDVTEELFYFAGRGYIKFILENLNKNADERTDAKD
                     LWVSVARDARTHSQSLTDSLIKGVTSTXWRKCFEYRHGADSSGVLF"
     assembly_gap    15409..15410
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            15436..16659
                     /locus_tag="CPT85_05325"
     CDS             15436..16659
                     /locus_tag="CPT85_05325"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02878.14,HMM:PF02880.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase"
                     /protein_id="DAB23208.1"
                     /translation="MVPTPLGYYSEFAQIPSNVISKGKINGALIVTASHNPSEYNGLK
                     MTFDKGSLTEEQIKEVKKLSMAEVNARETSNRHGIIKKYDIIEQYTESIVNKFASVGR
                     GIKVVTDCGNATAGVVAPQLYRDLGCEVVELFTEPDGTFPNHHPNPSDEKTLDVLKKT
                     VVEEKADIGIAFDGDSDRIGIVDSKGNALTGDKLLLIYAQDIVEPLAKRGECPCVVSE
                     VKCSQVLYDTINAMGGNAIMTKTGHGYIKSKMKEENAILAGEMSGHTFFKDRYYGFDD
                     AIYAGCRIIEIIAKQKACNPDFKIEDMLKPFEGVCTSKEVRFRCPNEFKKSVLEDMEK
                     EVEKNPDLFGTKIKDIITLDGMRIILEDGFAMIRQSNTEPVFTLRFEAKSEQNCKHYE
                     DTFVNLLDKTVKKYC"
     gene            16734..19213
                     /locus_tag="CPT85_05330"
                     /pseudo
     CDS             16734..19213
                     /locus_tag="CPT85_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012864397.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
     assembly_gap    18358..18364
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    18690..18691
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(19838..>19975)
                     /locus_tag="CPT85_05335"
     CDS             complement(19838..>19975)
                     /locus_tag="CPT85_05335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007049402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide oxidoreductase"
                     /protein_id="DAB23224.1"
                     /translation="FAKYGLGCIGCAAARFENLEAGAKVHGVDPDVMVDEINALIEAN
                     E"
     assembly_gap    19976..20000
                     /estimated_length=25
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            20119..20307
                     /locus_tag="CPT85_05340"
     CDS             20119..20307
                     /locus_tag="CPT85_05340"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23209.1"
                     /translation="MSFLKKIFNKLKDIFCIPQAPVGLQAMGIRXKVNGFNYSANRFY
                     TDLMSPVKDPYLLNLNDL"
     assembly_gap    20209..20210
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            20372..21358
                     /locus_tag="CPT85_05345"
     CDS             20372..21358
                     /locus_tag="CPT85_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002249743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-arabinose 5-phosphate isomerase"
                     /protein_id="DAB23210.1"
                     /translation="MLQTLNKINSISDLAKEVLQIEADSVLELKNRIDEDFEKAIDIL
                     YACKGRVIVTGMGKSGHIGRKIAATLTSTGTPSYFLHPAESTHGDSGIITRDDVVIAI
                     SNSGETAELMNLLPLIERFGVKMIAMTGKKESTLGKKSDVVLDVSVKKEACPLGKAPT
                     ASTTATLAMGDAVAICLLKKRGFTEEDFLMFHPSGALGRGVLYHVSDLMITGDRIPVV
                     NEENNFHDTIQLISAKKLGCAIITDQNGIMTGILTDGDIRRTLLKYDNTSTLKAKDVM
                     TRNPKIIMTNDLAAKALHIMEKHSITSLAVCDAAGRPAGLVHIHDLLKAGVA"
     gene            21358..21894
                     /locus_tag="CPT85_05350"
     CDS             21358..21894
                     /locus_tag="CPT85_05350"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23211.1"
                     /translation="MYSEELVQKAAKVKAAVFDVDGVMTDASLTFDENGVEYKTFNAK
                     DGQGVILLNKAGIVTAIITARENGTVRYRFKNLGMTKLYEGCKNKIAALRDFMEEFNL
                     KPEEIAYMGDDLPDICVLKTVGLPCCPNDAVDEVREHALFISSKNGGRGAVREMCNFI
                     LKSTGKYEQVVSEIINRK"
     gene            21897..22436
                     /locus_tag="CPT85_05355"
     CDS             21897..22436
                     /locus_tag="CPT85_05355"
                     /inference="COORDINATES: protein motif:HMM:PF00551.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23212.1"
                     /translation="MPKTIALVCGAKNCAEKAFRDYFKDRDVEIVKTDSLLEASECDL
                     CVLDGYSGHLSEEMLECTKFLNIHYSLLPAFDCRNPVEEAFKTGVKVTGVTLSLLDDD
                     GTKGRIIAQYPVFVDFFTTIDELEDELGKVVQKLAPFVAKSVLEDKVFSYAELLSNQG
                     GCSGSCSGGCSCSDEQDRA"
     gene            22860..23150
                     /locus_tag="CPT85_05360"
     CDS             22860..23150
                     /locus_tag="CPT85_05360"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23213.1"
                     /translation="MRVNNITPNYSNNINNTNKLYASKPVFKQSQTDSIVPTAXXIME
                     TLVEAANDKKNQNAFMSKIHFFRDVLFSAETTRKAQELKDAVESAQNIMYLA"
     assembly_gap    22979..22980
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(23260..23847)
                     /gene="rdgB"
                     /locus_tag="CPT85_05365"
     CDS             complement(23260..23847)
                     /gene="rdgB"
                     /locus_tag="CPT85_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015347876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase,
                     RdgB/HAM1 family"
                     /protein_id="DAB23214.1"
                     /translation="MIKIALGTSNPHKLEEINAMIKEVHPDSVEFVLVEGEFDPVENG
                     TTFEENSYIKAAEAAKIMGIPALADDTGLCVDALDGRPGLYSARYAPDQKSKIEKLLG
                     EMQNIPKDKRNAHFTCTMTLVNPDGTKLHTQTGKIEGYIDTKPHGGHGFGYDPIFFIP
                     ELNKTMADLKPEEKNTLSHRARALLPMIEWIKQNM"
     gene            23957..24685
                     /locus_tag="CPT85_05370"
     CDS             23957..24685
                     /locus_tag="CPT85_05370"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23215.1"
                     /translation="MYTVKPQNKISFGVRQSAADSFERFDNKISHVTLTPSGRLSSVV
                     FSEDTTLANALQNLGYTKNKTLESLLIGRLHPLEEIRQMHGDISKIKDIKDIKIKSLM
                     ALGATALVFETEDGNALKLTPYDHFPSKRQPADFDLPCFKKGKSGYTYYYLQEKITQD
                     DLAQDELRSFVKNIKKQGYKMKDYLLHYTPENVDETIRTDQFGRAGNGKIYLIDPGCA
                     IPSKELHNTDSLNIVKKALKYFGK"
     gene            complement(24698..25423)
                     /locus_tag="CPT85_05375"
     CDS             complement(24698..25423)
                     /locus_tag="CPT85_05375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003375284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="DAB23216.1"
                     /translation="MEAAEKKDIKAIVKNTNLKHIAIIMDGNRRWAKEKHLPSAMGHQ
                     KGVDSLRSTMRLFDRFGIKYLTVYAFSTENWNRKKEEVEFLMGLLAKTLLNELDDMHK
                     ENVRIRFLGDLTKLSKNLVDIVKNAENKTKDNTGVNLNIAFNYGSRDEITNALKAIIQ
                     EGLKSEDITEDTISNHLYTKDIPDPDLLIRTGGEKRISNYLLWQLAYSEIYVTDAYWP
                     EFDENELSKAIVEFEHRNRRFGK"
     gene            25572..25799
                     /locus_tag="CPT85_05380"
     CDS             25572..25799
                     /locus_tag="CPT85_05380"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23217.1"
                     /translation="MENANQLDEVRSSFDKSMDDFCLICGLSKILLNILENEDNNIQE
                     RDKISLATVLDRMLQKEKQNLDSISTKIFGY"
     gene            complement(25809..26831)
                     /locus_tag="CPT85_05385"
     CDS             complement(25809..26831)
                     /locus_tag="CPT85_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002561121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="DAB23218.1"
                     /translation="MLAKIEQLLQEIEGLHAANAEELEALRIKYLSKKGAINELMADF
                     RNVPADQKKEVGMKLNELKNKAQERISTLKEAFETQDNGAAEMDLTRTAYPIELGTRH
                     PLSIVKNEIIDIFHRLGFSIADGPEIEDDWHVFSSMNFAEDHPARDMQDTFFVEANPE
                     HVQGNVILRTHTSSVQSRVMESTQPPIRIICPGRVYRNEAISYRAHAFFHQVEALYID
                     KNVSFTDLKQVLLLFAKEMFGAETQIRLRPSYFPFTEPSAEMDISCNICGGKGCPFCK
                     GTGWVEILGCGMVDPNVLKNVGIDPEVYTGFAFGMGVERLAMLKWAIDDIRLFFNNDI
                     RFLKQF"
     gene            26942..27802
                     /locus_tag="CPT85_05390"
     CDS             26942..27802
                     /locus_tag="CPT85_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007836994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4348 domain-containing protein"
                     /protein_id="DAB23219.1"
                     /translation="MKKLIIGVCLLVLISSCGGGKKKIDPFEMLTEEIDSLAAVPDTV
                     EVMEVVEEEPMVPATADESFADFIYNFAIDEKLQVSRIVFPLPYYTMDKKEHIEKKDW
                     KHDPLFSQLDSYTVLFDKAVDMEAEKDTTATSVKIEWIYLKTNKIKRYYFERLKGLWK
                     LEAIDFADMPENEDSKESFYEFYEHFANDSLFQQTRLHNPLKFVTVDPDDEFQIIETT
                     LEAGQWFAFQPVLPREFLTNVNYGQNENSKSNTKVIEIKGFGNGFNNTLYFERRNGLW
                     KLVQFEDLSD"
     gene            27818..28831
                     /locus_tag="CPT85_05395"
     CDS             27818..28831
                     /locus_tag="CPT85_05395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007845527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="DAB23220.1"
                     /translation="MKEIKEYSLLPHNTFGMDVKASVFVEYGSVAELKAILSNKDYLK
                     PSWLHIGGGSNLLFTADYEGTVLHSAIHGYEVVDENDKTVDIRVGAGEVWDDFVAFAV
                     RHGWYGAENLSLIPGEVGASAVQNIGAYGAEVKDLIVSVETLEVSTGQERVFANDECH
                     YAYRESIFKKELKGKYIVTHVTYRLGKHPLFNLEYGNVRGELEKRGCEITLDNVRNTV
                     IEIREAKLPDPKVQGNAGSFFMNPVVSRLQFEALQREYPEIPHYNMGEDRVKIPAAWM
                     IDRCGWKGKQVGNAGVHSKQALVLVNCGGATGREIVDLSRQIQESVFLKFGITVSPEV
                     NFI"
     gene            28839..29618
                     /locus_tag="CPT85_05400"
     CDS             28839..29618
                     /locus_tag="CPT85_05400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005936422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="DAB23221.1"
                     /translation="MKITILGSGTSTGVPEIGCKCPVCTSNDPRDNRLRCSGLIETEG
                     VRILMDCGPDFREQMIRLNDFKPLDAVFISHEHYDHVGGLDDLRPFCRFRDVPVYAER
                     YTAERLRQRIPYCFAEHLYPGVPRILLKEIVPDSPFTVGNSKEAKVEIIPVRVMHGKL
                     PILGYRIGNMAWITDMLTMPESEYELLNGLDVLVMNALRPQSHSTHQNLQEALDNAKR
                     IGAKETYFIHMSHHMGLHSEVEKLLPPHVHFAYDGEVISVG"
     gene            complement(29615..30259)
                     /gene="nth"
                     /locus_tag="CPT85_05405"
     CDS             complement(29615..30259)
                     /gene="nth"
                     /locus_tag="CPT85_05405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008652899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="DAB23222.1"
                     /translation="MRKKELYDKVITYFQNAMPVAETELHYNNPFELLIAVILSAQCT
                     DKRVNMITPPLYRDFPTPEALAASTPEVIYEYIRSVSYPNNKAKHLVGMAQMLVKDFH
                     SEVPGTLEELIKLPGVGRKTANVIQSVVFNKATMAVDTHVFRVSHRIGLVPKTCTTPL
                     ATEKYLMKYIPKEIVPTAHHWLILHGRYVCMARTPKCEECGLNGLCQYSLKPTV"
BASE COUNT         9301 a         5662 c         6362 g         8970 t
ORIGIN      
        1 cctctcaata tttttacgcc catagcgctc aattgttttg cggtttggtc catctgctca
       61 taactttcga ccgtgcaagg gcctgcaatc atccctatat tatccccgcc gaattttact
      121 ccgttgactt cgattattgt gtcttcgggt ttgaacatac ggcctgcgag tttgtagctg
      181 gaagaaattc ttattacttc ctttacgcct tcaaagagct cgatgtctct ggggtctacg
      241 atttttccgc ctactgcgcc gattactgtc tgcacttcgc ctttggaaac gtgtgcgtca
      301 aagttttttc ttttaataaa gcttacaacg tcttgaatct gttcgtcagt ggcactgggg
      361 ttcatgatta tgagcataaa tcttttcctt tttttgtgtt attaattgct agcaaattta
      421 ttttttatgt gttttataaa aaataacctt tataatatac atgatggtac tataaaaatt
      481 atttttgtag tagtatataa aatacgcgta tcaaattcag tggagatttt atgctaaatg
      541 ttgaaggcaa agacaaaaac acataagttc agaaaaattg cagatgacct gagaagcgat
      601 gtaaaagcac cgcttgtgga ggctttggaa aagttttata aaaacccaat ggtacagttc
      661 cacatacccg gtcatacggc aggacgtgct gcttacggcc cttttaaaaa gctcatcggc
      721 aacaaagctt tgcttttaga cactacagac gaatttgata accttggcac actccacccg
      781 tccactggcc ctatcaaaga ggcacgcgcg cttgctgcaa aggcgttcgg cgcaaaggaa
      841 accttctttt tgctgggcgg ctccacaatc ggcaacctta cccttgcaat gtgtatgtcc
      901 aaaaannaaa gtaattgtta acagaaactg tcaccgctct attttgacag gcatgattat
      961 ttccggcgca gagcctgttt ggattctgcc ggaaaagctc aacgagtggt cgctctgggg
     1021 cgagatagaa ccccgtgaaa tcgaaaaagc attaaaagaa aacgatgatg ttgcgctcgt
     1081 gtggattaca aaccccacct acgagggcgt tgtatctaac gtaaaagcca ttgcggatat
     1141 ctgtaaaaaa tacgatgtgc ctctggttgt ggacgaggct cacggttgtt tgtggaactt
     1201 taacaaaaac cttccggaat cctcgcttca tcttggtgcg gatgctgttg tgcattcttt
     1261 gcacaaaaca ggcggaagca tgtcacagag ctctatgctt catattacac aaggttcaaa
     1321 gtttgatcct gatgaaattg aaagaacact ccagcttttg cagacaacca gcccctcaat
     1381 gcttttgatg gcaagccttg atgctgcgcg tgcaaacctt gagtcaaaac acggtaaaaa
     1441 acagttgaac cgtgccatac agcatgcaaa atacgttaga aaaagacttc acaaaattga
     1501 aggcgttcac gttttagaag caacagaaaa ctataatcag gatgttacaa aggtttttgt
     1561 ccgtgtggac gggctttcgg gcaaacgtct tgaaagtatt ctggaaattg attttgatat
     1621 tgaggtggaa tctgcaagcg atatcggtgt tttgctgtta atcaacatcg gcaacacaaa
     1681 acaggaaatt caataccttg taaatgcttt tgaaaaaatc gcgcatgcac agtattctga
     1741 tatttattac atagaaaaca gaaaacacat gcccatgctt accccgcaga tagtgatgaa
     1801 ccccagagaa gcatactaca gcgaaaaaga aactatctca aaagaacaag ctgttggcag
     1861 aatttcggca gaggttattg cagagtgtcc tccgggtatt tcgattttgc ttccgggcga
     1921 attgattaca caggagcaca tgccttattt gaatgaatac aaatatcttg aagtaatcaa
     1981 aaaatagcaa aaatattttt gttggtacgt tatgtgaata tgtatcttgt aagtaatttt
     2041 ttcaatgctt ctatcagacg ccctgttttt aggggcaaaa cttcggctga gaatattcaa
     2101 tcatctgagt tttcggggat aaagaattta gaatcagata tttttgtgcc gcaaaataca
     2161 ttaaaaaggc ctactgaatt tggcacagta agctatttga aagacaacag ctttgaagaa
     2221 ttaagattta aaaaaccgct gacacttgct caggctcttg atactgttca aaaggctgat
     2281 gataaatacc acctttgcag atacggggtt gtaaaaagcg ggtttacgct caacgagttt
     2341 aaagaatcgt ttgagatgag atttaaaaat atgaaattta ccggttttct tggaagcggc
     2401 tacagtgcgc ttgcgctgga aaaccaagac ggaaacatcg tgaaattgtg cacagacgac
     2461 cattttgcaa tgagaaacaa aacagaagac tttgacgcac aggtgctcaa aaagggtaca
     2521 ataaaaaaac aatattttta ttacatccaa aaaaaatact caaaaaaagg tgtaacacag
     2581 cacgatgttg accttatgga aaaaaagatt ctctcaaaag gttatattgc aaacgacttg
     2641 tacgaggggc aaataggcaa agacaaggac ggaaagattt accttattga ccccgagtgt
     2701 gctgttgatc ctgccaaaaa agccgaaata aacgaaaaaa cagaaagctt tatacaagaa
     2761 tgcataagaa acggctggat gtagtttttt tgtgaatttg ttttataata atttctatga
     2821 gtaacatttt aaagtggagt tttaaaaatg cactggttgg catggcgtgt atgttttgcg
     2881 tcgttgtcat agcgtgtgct tttcttgcgc ctgttcttgc gcattcaaat tttgctcctg
     2941 ctgccaatgt tttgtatgac tttttgcaca ggctgtgtaa aatgcatggc acgaatattt
     3001 ttactatttt gcaccatcca atcggaattt gtgcgcgctg cataggttct tatatcagtg
     3061 ctgcaatcat tttgtatact tatcttcaca agttcaaaat ggacaagata atttttatta
     3121 tcataggtac acttgctttt ggcgagattg tcgcagagtn nnnataagac taatagacgg
     3181 ctttttcctc ggtgcgtttc tgggcatgtt gtttataaag attcttgact ggctcgaagg
     3241 caaaaaggga tggtaatttt tagtcttaag tttggcaaac agtacacaaa aatatgagtt
     3301 ttcaattttg ttaatatttt gttacaaaat tgtgcgttaa tttcgtatta attttaaata
     3361 aacaactcta atattaaaaa aacaatttac atttattgta gtaattagac ttaagatgta
     3421 ttccctaacc ccaaaaaaat gttataatag aaaaacagag aagaattaag tgttctcttt
     3481 acccttattt aagatatgta aagatattgt taacaaaata tgctaaaaag tcaattaatt
     3541 ttaaaccact gtttttaata taaatgtagg aaatatttta gtaggtaatg tcggaggaaa
     3601 gacatgacaa ttagtgtgaa ctcaagaaaa aaacaagcaa aaaaatcatt tgacgaattg
     3661 ctcaatgatt taagaacaag caattctgaa aaagtcagat ataatgcagc tcgtattctt
     3721 ggagaaatag gtgattcaca ggcagttgaa ccgcttattg acgtattaaa aaatgataaa
     3781 aacggctctg ttcgtttgta tgctgcaaga gcattgggcg aattaggcga tgtaaatgct
     3841 acaattcctc ttatcgaatc cttgagagaa gatagaaacg ttgacgttcg tgtccgtgct
     3901 gctcgtgcat taggacgttt gggcggcaaa gaagttgtag aaccgcttgt tgaagcactt
     3961 aacgatgaaa accctcaagt ttgtatcact gctacagatg ctttaatcga aatcggcgac
     4021 gttgctacag atgctttgat ggaatcttta gaccatgaaa aagttaacgt aagatgcgac
     4081 gctacaagag cactgggtga aatcggaaac cctaaagcag ttgataaaat tatcactatg
     4141 ctgaaagatg aatgggtaaa tgtcagaata tatgctgtaa cttcacttgg caaattgagc
     4201 gacaaaaaag ctgttccggc tttgattgaa gttatgcaaa acaaaaaaga aaatgacctt
     4261 gttagagcag gtgcagcagc tgcgcttggt gtattgagag accaaagagc tcttatgcct
     4321 ttgagagaac tcatcatggc agcagacgag ctgggcgaac tcgaagatac agctttgaaa
     4381 tcattcaaaa aaatcatggc agctaactgg caggctatcc ccggtgctgc tcctcaaaag
     4441 aaaacagcaa atgcctagtt ttaggaaaat gttgttactg acataaacca aaatttaaaa
     4501 agctccttaa aattttcaaa ttgattaagg agctttttta ttgcgtttgt aaaaaaatct
     4561 atttgcttgt tactacccat ttattatctt caaatttgta ggttttgcag gcaccttctt
     4621 ttataaattt tttgagcagt attgtatcgt tatatccttg cattgtaaac acacggcttt
     4681 ctctcacttt tatatagtct gcaagctgat atttgttaag tgagcagaca taagagagct
     4741 tttctttgct aaactcgtta atagtttgta taacgcattt tccctgtttt ggccctctta
     4801 caatactcat tgagcttata ttgtttggct gcggcagctt gccttttgaa acatgcgttt
     4861 tgcatgttct caagctttta aggtagtcct ggtctacgta tgtgttataa acagtaggtt
     4921 tgaaaagtga ataaagaccg aagatgatta aaaataaaac aataggaaat ccgtatttgt
     4981 ccattaatta tcctttatat ttcatacatt gcagcgttat aaagttcatt tcttcttttg
     5041 aaatgtccgt aaacgtcaca gccgtaagga atttaaaaga gttgttaatt cttatcgggt
     5101 tagaataaac cagctcggca tgtgtgttga tttgtttgcc cgcaaggaaa agctcgatat
     5161 ccagttttgt gtatgcgttc atttgtttgt cagagataaa ggccagccct tttgcgcaaa
     5221 tgttttttgt tgttgctatg attctatcca cctgtgtgcc ttcgaattca actgtcatag
     5281 caaaatctgt ttctatgtct gctcttaaat attcacgtct ttgagagtgt ttgatattgg
     5341 acggaaaaga gagcatgtaa aatgttgttt cgttcaggta attgctcgat aaaattctgc
     5401 ttgttgcatt gtatacgccg tcttgagcgt aaatatttat ttcgatttct ttttcaggga
     5461 gctctgtttg tttgtcaaaa aagactgtca gcttatcgtt ttccacataa taaattgtgc
     5521 aaaaatagct tttgttgtcc agaattattt ccagtttatt tgagggtttt aagaaattat
     5581 aactatccaa tactaaactc ccaaaaaatt cttatgttta tattatacca tcatgattcc
     5641 acattgttgt taattttaca caaaaaatat ataattaatt ttatgacaag acaaccattt
     5701 ttttatgata ttacattaag ggacggaaac cagtctctta aaaaaccgtg gaacttaaaa
     5761 gaaaaagaat ttatctttga caaactcgtc aaatttggtg ttcaggctgt ggaggctggg
     5821 tttccggcag catcagacat ggattttgag gctgtaaaaa ggcttgctca aattgcggat
     5881 gacaacctcg taataagcgg cctggcacgt gctgttgagc atgatatcga aactgctgtt
     5941 aatgcgataa gtttttctaa aaaaccaaga ctgcatacgt ttattgcaat gagcccgttt
     6001 aatatgaaat atgtgctaaa caaaaaacca caggaggtaa gaaaaacagc agttgaggca
     6061 gtggcttttg caaaagaaaa aatccaaaaa gtatcaaaac aaggcgaagt gcagttttct
     6121 gtagagcatt ttggcgattg catggaaaat ctcgattatg taattgatac attaaaagac
     6181 gttgtaaaag ccggtgcgac cgtaatcaac cttcccaaca ccgttgaaag aacaagggta
     6241 aaaacttttg tggacatggt agaaaaagtt tatcatgcac tgccaaaaga cataatgatt
     6301 gccgtgcact gccacaatga ccttggcatg gctactgctg caacaataga gagctatttt
     6361 gcaggtgcaa cacagctgga atgttcgtta aacggtcttg gtgagcgtgc gggcaacacc
     6421 aacatgtacg aggttgcggt ggggctgcac aacagcggcg tggatgtgcc gttgaacctt
     6481 ggcgaaattt atgagcttgc tcttgttgtg tcagacatgt caaaagtaga aatacctgaa
     6541 aaagctcctc tcatagggcc tgaagcactt gctcacagaa gcggtattca ccaagacggt
     6601 gcggttaaga caaaagacat ggaaaaaggt gcctacaggc cgattcatcc gactctcatc
     6661 ggtagaaaag atgacgaaaa aatcggattc acaagccagt caggcaaaac agcggtgttt
     6721 gagattattt ctgatgccgg ttatcccatt acaatacaag aagctgtcag aattacacca
     6781 attgttaaag aagcggcgca aaaggtcggc gaacttcctg caagaaatat tattgatatt
     6841 tactttaacg aagtattcaa tgtcaaaggt gatttcaggc ttgtggcgtt tgaaaaactc
     6901 gctgaaaata tgtttaacct caaatttttc cacaaaacag aattttttga catgaacgca
     6961 cagggcaacg ggcctttgga tgcatgtctt tctgctttaa aacaggccgg ttaccctcaa
     7021 aaactggtgg attacgagca atatgctgtt gacggaagaa tttttggttc cggtgctaca
     7081 gccatgaccg ttattcattt tgaagacctt gacggaagga caattcttgc cagaggcaag
     7141 gatgaaagca cactaaaagc aaacgtaaag gcaatcttta acggtttgaa tttgatgagc
     7201 aaaaattaaa caacaaacta attgcaaaac tcaaacagtc ctgtaaaata gttgtatgca
     7261 aatatttgtg tatattttaa aaagactgct tcaggcgata cctcttttgt ttctggtgtc
     7321 gataataagc ttttttataa tcagactaag ccccgtagac cctcttggtg agcttcggct
     7381 taacccttca atctcacagg agactctaaa atccgaacaa caaagactgg ggctcgacaa
     7441 acctaaaatt gttcaatacg gcttgtggct caaaagcttt ttaaaaggcg acctcggcgt
     7501 caccgtgacg ggagaaaaag tcagtacaaa actatgggag agaatcccta atactctttt
     7561 gctcacaacg gtggtgattt tgctcacgtg gctggttggc ataccgctcg ggatttatgc
     7621 tgctttgaac tggaaaaagc ctgttgacag gatactgacc gttgtaacga gtataggtat
     7681 ggcaattcct tcgtttttct ttgcgttgct gcttttgata tttgctgtaa aaacaggctg
     7741 gttcccgaca ggcggcctta cttcttacaa tttttccaat cttggccctg cgggcaaggt
     7801 aattgatata gctcatcacc ttgtgctgcc tgtgatagtt ttgtttacta tttctttatc
     7861 aggattgcaa agacagatga gaggcaatct gcttgatgtt ttagggtcgg attatgttaa
     7921 atttgcacgt gcaaaaggct tgagcgagaa caaagttgtg tacaaacacg cactaagaaa
     7981 tgctatcaac cccatggtta cgctgctggg gtttgagttt gcgtctcttt tgagcggggc
     8041 ggcgcttacg gagtatgttt ttcagtaccc ggggctcgga cgtttgatac tcgaggctgt
     8101 tatgaaatcc gatatcaatc ttgttatggc ttctttgatg atgggtacga taatgctcgt
     8161 tctgggcaat ctgcttgcag atatcttgtt gaaacttgtt gacccgagag tgagtgtgag
     8221 ctgatggaaa caaaaaattt atttaaaaaa ctttttggct cacagatttt taaagacaaa
     8281 tacgcttcca cagcgcttgt tgtacttttg atactgtatc tgggcatttt gtttgcggat
     8341 tttcttgctc cgtattcaaa agagttttcc gaccgccaca gggcatatgt tcctccgtca
     8401 aagattttta ctattgacga aaacggcaaa ctctcgcgtc cttatacata caactacaaa
     8461 agatacttta accccgagga gctcaaaatt acttacaaac tggacaggag caaaaagtat
     8521 tatttaaaat tcttttccaa gggtgaaaag tataaatttc tgggtctgat ccccatggaa
     8581 agacaccttg taacagtaga ccctgacggg cgtttgtttt tgctcggcac agatataaac
     8641 ggcagggata tattttcgcg tatacttttt ggcggaagaa tatctttgac aataggtttt
     8701 ttggcgctgt ttatttcgtt tcctcttgga atgctttacg gagggatttc cgggtatctt
     8761 ggcggagtgg cggataacct tatgatgagg gtgtccgagg caataatgtc tattccgagt
     8821 ttttatcttt tgattattct tgcggcaatt ttacccacaa atatgacaag cattcagcgt
     8881 tttactctta taacggtaat tcttgcattg ataggctggg cagggttttc gcgtgttgtt
     8941 aggggcatgg ttctgtctat aaaaaatcag gagtttgtgc aggcagccga atccattggc
     9001 gcttcaaaac ttcgcattat tgtaaaacac ttgctcccgc agactttgag ctatgttatt
     9061 gttgcaatga cgctttctgt tccttcttac atactggcag aatcaggttt gagttttctc
     9121 ggactgggaa tccagcagcc ggatgcaagc tgggggaata tgctcaaaga agcacaggag
     9181 tatgttaata taatctatcg cccgtggctt ttgacacccg gtttcttaat ttttattgcg
     9241 gtcttatctt ttaacctcat aggtgataca ataagagaca tattagaccc taagagtaaa
     9301 gttagataac aggctcaagg tagtataaaa tagaattagt gcatacgttt taacggaaga
     9361 gaaaagattt aaaaaatgga acatctggca tttaacaacc ttattataga aaaaagtatg
     9421 cttttagaca tactgcttgc aatagtactc ggttttgcaa tcggttttga acgcgaaatt
     9481 acaaacaaat gggcagggct gagaacgcac atgcttgttt gccttggctc ttgcatattt
     9541 acattgctgt ctatccacgc atttcctgtg tttgctcaca gcccgcaggc agaccctgcg
     9601 cgtattgccg cacagatttt gacagggata ggttttatcg gcggnnggcg gtggtactgt
     9661 tttaaggcac ggttattcaa tctacgggct cacaactgct gctactttat ggattacggc
     9721 cagtatcggc atggcttgcg gatgcgggtt tacctctctt gctataatct gcacggtgct
     9781 tgctgtgggc acacttgttt taatcagaat ttttgaaaaa caatatatcc acaaaggcac
     9841 aaaaaacccg agaaagttta aggtaagttt ttattctccc attgaggctg ctgacacaat
     9901 ttattctaaa ataattgaaa agtttaactc tatttttgaa ataaacaaat caaactcttc
     9961 ttccaacgaa ggaatgatga aaataagttt cagattagat gtctttgata agaatcctgt
    10021 gcaggcattg cacaaagaat tgannnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnntaaa
    10081 atagaaattc tggaatactt gcgaacaatt ttgattgcac tgcttgtggc actttttttg
    10141 gcggcggtgg caacaggttg ttcaaaaatc gtggcggaac accatgccag aatgctcgca
    10201 agaataagca atacaacaaa agacaatgaa atgattgctt atcttattac aaaatacact
    10261 gaacaggcgc aaaaaaatcc aggagattac tccatccatg tgcgtttggg caatctttac
    10321 gagctcatgt ttgattacaa acacgcagag gagcagtaca aaacagctat tgataagtct
    10381 ccgtacgggg tgtacagctc ttatttgggt ctggctaatc tttatcttaa aatgggcaaa
    10441 tacaacaaag cgcttcgaat tgttaaaagg ctcaaaaaca cagaccacaa gcctttgtta
    10501 atagccaagg gtgattttta catgaacctt ggcgaccttt tgtggcaaaa aaataaatac
    10561 aatgacgctg taaaacagta caaaatcgca tttttctatt acaaaaaagt ggattccaac
    10621 aaaaaagatt ctgcggttgt gggcattttg gactgttaca acaaaattgc ggatgaggat
    10681 tttaaacacc acagtatttt aaaagcaata gaaagtctgg aaacggcact tttgtacaaa
    10741 gagacgccta tcatgtatta caaacttgca attttgtaca aagacgttga ccctgttgtt
    10801 gcaaacaaat acatggaaaa aacctatgct ctggaccccg gtatcattaa ctttgacata
    10861 tatgaagaaa tactcataaa gctggtaaaa caatactaca gcgaaggaaa agacgttgag
    10921 acagatttgt ataaacacaa actaaaatca ataaaaactt tccaaaaaag atatgttatt
    10981 tcagaaaaag atgtgacaat aaacattgaa aaactcgagg taaaaaacaa tctttttaaa
    11041 acaaaacaaa ccgttaaagt taaatttaaa atagaaaata catccaagca cgattttaat
    11101 actctttttg ttattgccaa actccgctac gacaacaaga gcaaagaaat ctttaaccac
    11161 aaattttata caaaaaaatc accgctcaaa tctcgcagcg agtcaccgtc ttatactttc
    11221 aaatacacct acagcgacaa agacgaaatc tacacagctg aaaaagtaaa cctcgatttt
    11281 tatgcgggta aaaaagaaaa catgagaaaa attcctgttt actccgtcga attgcaaagg
    11341 ttttagctta aaattgtaaa aaaattatta aaactcttca aaaaaatgta attagaaggt
    11401 aaaattactg tataggagta gttgaagatt gggaaatttg ctacataaag agaatcaaca
    11461 attatattcg gatgttccgc cgagaaaact gcgtaacatt gacgaaaaat ttcgtgctgc
    11521 aaaacccacc ccattttgga gatgggtggc tgaccagttc ttttacaaca tgctcgaaaa
    11581 cagatttttc tctttaaaaa ttaaaaacaa agaaaactac gacaaaagag accctcagtt
    11641 tgcaaatata atctatgctc ctcacaacaa ctggtgggac ggaattgtag gctacaatct
    11701 gtgccgcaga atttttaata cagatatacg catgatgatt gaggaaatga acagatttcc
    11761 gattctggcg agagcaggtg cgtttcctgt taacaaaaaa tcaccgcagg cgtctatgcg
    11821 tgctttgcag tattcggtgg atgaactttg cgacaacaaa aaatctttat ggattttccc
    11881 tcagggcatt attcgtcctc ctatgtaccg gcctatcgag tttcagacag ggcttgctta
    11941 tattgcaaaa aatgttgcaa aaaaagcagg cggggtcaac cttatacctg ttgccgtaaa
    12001 ctatcctttc cttcgagaag acaagcctga agtactctgc gaagtgggcg agccaattgt
    12061 tttaacagat tataattttg atagaaaaga gtttacccac cgtgtggaaa aaaactttga
    12121 agcgctttgc gacaagcagt ttgaagacat cagacacggc aacattgaag attacgagta
    12181 tttgtacaaa caaaaactca aatggtataa aaaactcgaa aaacgattga aaaaaatcga
    12241 tatgccaaaa ggttcaggag tttaatcaaa ataacccaca tacggcaggt tgcgcatata
    12301 tccttcgtaa tccagtccgt agcccacaac aaatttgtca tcaatttcaa aaccgtaaaa
    12361 atcaggttct atatctgttt ttcgtgctgc ttttttgttt aaaagcgtca caaccttgag
    12421 gtttttgggc ttgtgagtgc ggcagagcat ctcgagtaaa aatttcattg tgcagcccgt
    12481 gtcaataatg tcttctacaa tcagggcgtt tttgccttcg aggtttggca gggtcaaatc
    12541 cattgcctgc acatgaccag aggatgtttt ttcgtttccg tagctcgaaa cccttataaa
    12601 ctccatctta acaggcattt ttagatattt tgacaggtcg cagaagaaca tgcttgaccc
    12661 tttgagcacg cagatgatgg ttaaatcttc tattgttcca aatgtgttgt ttatctcgtc
    12721 agcaagctca cgtgttcttt tttcaatctg ctgctgtgag aataaaatct ttaagtcttc
    12781 aacttttcta tctgtcatag ttttttacct gtcttctatt tttaacatat gcgtgggaag
    12841 cttgtctgct cttagctttt cgcttacgca cacaccggct gcccagaaga tttcctgtcc
    12901 tttgcacagg aggagaattt cgtcccgttt aaatttttct atccctttgt ttataaaaag
    12961 ttttttgagc ttcattgtgc ctttcatacc aaagggttga attacatccc cgtgcaagcg
    13021 ggtgcgtaag cgaaaatcga ttttatcatc aatctgcaca tatgccgcag gctcgttgga
    13081 gtgcggaaag actggcattt tggaatcttt gtattcttcg agcttaaaaa ttttgtcatg
    13141 aaaaacatat gtgccgcatt tgtcgatttt tatttcgtct ttaatctttg caggctcaag
    13201 gtcttcgatt gtgcagattt tttcttttga cacaaacagc cataaatctt ttgttaaaga
    13261 cagggttttg ccggattttc ggtttgcatt tttttgtata aattcataaa tttcgtccac
    13321 ttttttggag tcataatcta gattgtgctc aattaaaaaa tccagtataa acttgttttg
    13381 cacatcctgt gaaagctcaa cgaatttttc tgttacaaaa aacccttctt ttttgtccgt
    13441 gacctgtgtt ttgatttttg acaggtattc tttaatgata ttctgctctg aaatagcaat
    13501 ttttgagagg tttaaaataa cgtcttcaat tttggggttg attgttttta gctcggaaat
    13561 tatctgatgg cgcaaaaaat tgcgtgcgta ttttgtgtca aaattgctcg agtcgttgtt
    13621 gggtacgagt ttgttcaccg tgcagtaacg cacaatgtcc tttcttgaaa acggcataag
    13681 cggcctgtaa acatcgcaaa aatcgagctt tgaattttca agaatcccgc acagaccttt
    13741 cactcctgtg cctttagaca gtctgtagag aatagtttcc gtgttatcgg attttgtgtg
    13801 cgcaagaaaa agcccgtctg cgttgaattt tttgtagcat tttttaaaga actcctgacg
    13861 tttttctctt gcagcggttt cggtttttgg cgtgcccact ggcagtgttt ccgtataaat
    13921 ttggatattt ttttctttgc aatatctttc gcagttttcc tgctcaattt cggcttcgcg
    13981 tccgcgccag ttgtggttta ggtgcagtgc aatgagcttg aatcctgatt tttcgcttat
    14041 gcgatacagg atatcaagca tgcacatgga gtcatatccc cctgaaaacc ccacaacaaa
    14101 agttttgtta ctgtcattta aaccgtgctt ttttaaaaaa ttttttactt tgttaatcat
    14161 gacaaaaaca attatagcga aattattttt tttttgctaa tcctcgttaa aaacccacat
    14221 ttttctagtt ttccactgga tgattgtcaa aaataaaatt atcaaaaaca gaatataagc
    14281 acctgcgctg gcctgaccga tgttaaaaaa ttcaaaagca tttttgtaaa tccagtacac
    14341 aagcacgttt gtagaatcca tcggcccgcc ttgcgtcatc agataaataa ggtcaaacac
    14401 ctgaaacgat gaaatggtgg tgataacaag gacaaaaaat attgttgggc tcaaaagcgg
    14461 aagcgttatt gtaaaaaata tcctcaaagg gcttgcgccg tctatttttg cagcctcgta
    14521 gatgttgttg tttattgcag aaaatcctga caaaaaaatg accatgttgt agccgatgag
    14581 cttccacgaa gacacaataa taagtgcaat catggctgtg tgcgcgtcat agagccagtt
    14641 tatgtgtgct tttaaaagnn tccgatatta gggtcaaaaa tccactccca cacaatggct
    14701 gcaactatca tgggggtgat aaaaggcaga aaatatgctg ttttaaaaaa ctccgtacct
    14761 cttattttgt tgttcaaaac agcagccaga acaagcggga taacaagcgc aatcaaggcc
    14821 gtggaaattg caaacacaaa agtattttta attatcaaaa aaaacgatgg gcttgttaaa
    14881 agctctttgt aattttctaa ccccacaaac cttatatcag acaacaaatc ccagctgcaa
    14941 aaactcaaat aaaacgaaaa aattacaggc agcacaataa aaataagcgt ccccagcaat
    15001 gcgggtgcaa gaaacatttt atgcacaaat ctgtcatcaa aaaacttttt cacaaaacga
    15061 ttataacaga gtttgataaa ataaatatgt gtcgcttttg gactttggca gaattttatg
    15121 aaataataag atacattgaa aagcataaca gaggggtaag tatgactgaa acactggatt
    15181 ttagagcatt cggcaaaaac gatataagag gaatctacgg cgaagatgta acagaagaac
    15241 tgttttactt tgcaggaaga gggtacataa aatttatact cgaaaacctc aacaaaaatg
    15301 cagacgaaag aaccgacgca aaagacctgt gggtcagcgt tgcaagagat gcaagaacac
    15361 attctcagtc attaacggat tctttaataa aaggtgtaac ctcaacagnn tggcgcaaat
    15421 gttttgaata tcggcatggt gccgactcct ctggggtatt attctgaatt tgcacaaatc
    15481 ccctcaaacg taatcagcaa aggcaaaatt aacggcgcac ttattgttac cgcaagccac
    15541 aacccgagcg agtacaacgg ccttaaaatg acatttgaca aaggttcttt aacagaagaa
    15601 cagataaaag aagtaaaaaa actttccatg gcagaagtca atgccagaga gacttctaac
    15661 agacacggta ttataaaaaa atacgatatc attgagcagt atacagaaag tattgtaaac
    15721 aaatttgctt ctgtgggcag aggcataaaa gtcgtcacag actgcggaaa cgctacagca
    15781 ggcgtggttg caccgcagct ttaccgtgat ctggggtgcg aggtcgtgga gctttttaca
    15841 gagcctgacg gaactttccc taaccaccac ccgaatccaa gcgacgaaaa gactcttgat
    15901 gtgctcaaaa aaaccgttgt tgaagaaaaa gctgacattg gtatagcttt tgacggcgat
    15961 tctgacagaa tcggcattgt ggactcaaaa ggcaatgccc tgacaggcga caaactgctg
    16021 ttgatttatg cgcaggatat tgtagaaccc cttgcaaaac gcggcgaatg cccctgtgtt
    16081 gtgtcagagg ttaaatgctc gcaagtgctc tacgatacaa tcaacgccat gggcggaaac
    16141 gcaatcatga caaagaccgg ccacggctat atcaagtcta aaatgaaaga ggaaaatgca
    16201 atcctcgcag gcgaaatgtc cggccacact ttctttaaag acagatatta cggctttgat
    16261 gacgcaattt atgcgggctg caggattatc gaaattattg caaaacaaaa agcgtgcaat
    16321 cctgatttta aaatcgaaga catgctaaaa cccttcgaag gtgtctgcac atcaaaagaa
    16381 gtaagattcc gctgccctaa cgagtttaaa aaatcagtgc tcgaggacat ggaaaaagaa
    16441 gttgaaaaaa atccggattt attcggtaca aaaataaaag atataattac cctggacggt
    16501 atgagaatta tcctcgaaga cgggtttgca atgattcgtc aaagcaacac cgaacctgtg
    16561 tttacgctgc gttttgaggc aaaatccgaa caaaactgca aacactacga agacaccttt
    16621 gtaaaccttc ttgataaaac tgtcaaaaaa tattgttaac actgtttgtt cttatctttt
    16681 gttttgacta taatttagtt aatgagagct aagttatagg tggataaaaa gtgattaaag
    16741 aacaatattt tcctcaggaa attgagaaaa actggcaaaa agtttgggaa gaaaataaat
    16801 tcgggcatac ttacgacgac tctgaaaagc caaaatacta tgcgctttca atgtttccat
    16861 acccgtccgg caaactgcat atgggccatg tgcgcaatta cacaattaca gatgttattg
    16921 cacgttttaa gaaaatgcac ggtttcaatg tgctccatcc aataggctgg gattctttcg
    16981 gtcttccggc ggaaaacgct gctattcagc acggcgaaag ccctgaaaaa tggacagacg
    17041 aaaatatcgg ttacatgaaa atgcagctga aaaaactagg cctgatgtat gactgggaca
    17101 gagaagttgc cacctgcaaa ccggattatt acaaatggac tcaatggctg tttttgcagc
    17161 tttataaaaa agggctggct tacaaaaaag aagctgctgt taactggtgt gacaactgcg
    17221 caaccgttct tgctaacgag caggtaattg acggcaaatg ctggagatgt gacagcgttg
    17281 ttgagaaaaa atacctttct caatggttct taaaaattac cgactacgca gaagtacttc
    17341 ttaaggacat cgacaaactc gaaggctggc cggattctgt taaaacaatg caaaaaaact
    17401 ggattggcaa gtcacagggc gctattctta aattcaaagt aaaagaaatc gaaggaatgg
    17461 aaatacctgt ttatacaacc cgtcctgaca cggtttacgg aatcacatac cttgttgttg
    17521 cacctgagta taaagatatt gaaaaactca caacacctga gcaaaaacag gctgttgaag
    17581 actaccgtgc aaacgcacgc aaaatgacag aaatcgaaag actgtcaact gaacgcgtta
    17641 aaacaggtgt acctcttggt actcacgcta tcaacccgtt taacggcgaa gaatttccgc
    17701 tttggactgc ggattacgct cttgttgaat acggtaccgg tgctgtaatg gctgtaccta
    17761 cgcacgatga aagagacttt gagtttgcaa aaaaatataa ccttcctatg aaagtggtta
    17821 ttgaaaatcc tgaaaacccc tctgactgca aggatgctgc gtacacagaa cccggtgtac
    17881 ttgtaaattc agaagaattc aacggcatgg ataatgacaa agccaaaaaa gctattacac
    17941 aaaaagctgt agacggcgga tacggcgaat tcaaaaccca gtacagactg cgtgactggc
    18001 tgatttcgcg tcaaagatac tggggtgctc cgattcctat agtttattgt gaaaaatgcg
    18061 gcccgcagcc tgtaccggaa gaccagcttc ctgtaaaact gcctgaagac gtagatttca
    18121 aagttcaagg caaatcacca atccttacat caaaaacttt ccttgaaaca acctgtcccg
    18181 tatgcggcgg caaagctaca agagaaactg ataccatgga tacattcatc tgctcaagct
    18241 ggtactacct cagatacgca gacgccaaaa acgcaaacgc accgtttgat aaggcgcttg
    18301 ctaacaaatg gctgcctgtt gaccagtatg taggcggtat tgagcacgct attttgcnnn
    18361 nnnntacaaa agcgttgaaa gacctcggtc ttgttgactt tgacgagcct ttcaaaaacc
    18421 ttttaacaca gggcatggtg ctcaaagacg gctccaaaat gtctaagtcc aaaggcaaca
    18481 cagtagaccc tgatgaaata tttgaaaact acggtgctga cactgcaaga cttttcatcc
    18541 tttcagactc gcctccggca agagactttg actggtcaga cgccggtgtt gaaggctgtt
    18601 acaaattctt aaacagagta tggagacttt actcaagcca gcaggaaaac ctgatattgg
    18661 actacaaact gcctgatgat gtgtcttcgn ntcttcgctt tcaaaagaga acaacgacct
    18721 tgtaagaacc acacacattg cgattaaagg tattacgcag gatatctcta atgaattcca
    18781 gttcaatacg gttatttcaa aataccgcga gtttgtgaat gccatttacg attatgcggg
    18841 caaaaaatct tccttcaacg atgaggacaa gaatgtattg agttttgcgc ttgtgactct
    18901 tctcaagctg cttgcgccta caacagtgca tttgacagaa gaaatctatc actcaatcgg
    18961 cggcaagggc tctatccatg aaactgattg gcctgttttt gaagaaaaac tcgcaaaaac
    19021 ttctgcaatt acgctcgtgg tacagataaa cggcaaagta aaagacaaaa tagaggttga
    19081 ttcggaatct tccaaagaag agttcgaaaa agccgctatg gcaagcgaaa aaatacaaga
    19141 tgcaatcaac ggcaaaacag ttgtaaaaac aattgtagtg cccggcagac ttgttaatat
    19201 agttgtaaag taacacgttg agggtaaact ccgcacctcc actgtcacat acaggtgaag
    19261 aaaaggacag aaaggaggtg agttatgaag agacaaataa taagaagcgc tctagtggtg
    19321 ctagaagcgc ttcttaaagt tttattaatc ttcatatagg gggtgaataa acggtttaaa
    19381 tgttagcggc atttaagccg tttccctata ttcttattat aaactattta atgaaatatt
    19441 caagcttact taatcgttgt ttatattcac gattaactgt tacaatcgtg gcactttgta
    19501 acaattaata ttacaaatgt aaaaattcta aaaaaaattg caaaaaagca tggctgattg
    19561 tgtttatata tatgtaagga aaaggtgaag gtattttatg tatagcccgc aatttatgag
    19621 atttttaatc ggccgtgacg cagatgatta tgtaaacgaa gaaaaaaaac aggaagaatc
    19681 aaaaagtttt gacagcgtta tttatcgttg ttcaaaatac gccactgtgc ctatagaaat
    19741 taaaaagcat aattaaaaat atcgaacaaa agttttaata aaaaaagact gctgatttat
    19801 atttagcagt cttttttatt gtccgaatgt ataatattta ttcgtttgct tcaatcaatg
    19861 cgttgatttc atcaaccatc acatcggggt ctacgccgtg tacttttgcg cctgcttcaa
    19921 gattttcgaa tcttgcagca gcacagccaa tacagccgag tccgtatttt gcaaannnnn
    19981 nnnnnnnnnn nnnnnnnnnn tttcttttgt aacttttcct gccataataa attatccttt
    20041 ccaatgtcaa tgtcttgact ttgttctaaa tttcgttaat tagattatac attaaaaaat
    20101 tagcgtgtgg agtgtatcgt gtcattttta aagaaaatct tcaataaact taaagacatt
    20161 ttttgtattc ctcaagctcc tgtcgggtta caagccatgg gcatacgcnn taaagtgaac
    20221 ggcttcaact acagcgcaaa caggttttat actgatttga tgtcccctgt aaaagaccct
    20281 tatctgttga atttgaacga tttgtaattt gccctcgtaa tctcgtttgt cgtataattg
    20341 atataagatt attaaaacga ttagaggtta tatgctgcaa actttgaata aaattaactc
    20401 tatcagcgac cttgcaaaag aggttctgca aatagaagct gactctgtgc ttgaactcaa
    20461 aaacagaatt gatgaagatt ttgaaaaagc catagacatt ctctacgcct gcaaaggacg
    20521 tgtgattgtt acaggcatgg gaaaatcagg ccacattgga agaaaaatag ccgcaacact
    20581 aacttcaaca ggcactccgt cttattttct ccaccctgcg gaaagcacac acggggattc
    20641 tggcataatc accagagatg acgttgtgat agctatctca aacagcggtg aaacagcaga
    20701 gttgatgaat cttctgcctt taatcgaacg ttttggtgta aaaatgattg ccatgacagg
    20761 caaaaaagaa tccacactcg gcaaaaaatc agacgttgtg ttggatgttt ctgttaaaaa
    20821 agaggcctgc cctctgggta aagcgcccac agccagcaca acagccacac ttgctatggg
    20881 tgacgctgtt gcaatttgtc ttttgaaaaa acgcgggttc acagaagaag actttctcat
    20941 gttccaccca tcaggcgctc tgggccgcgg tgtattgtat cacgtttcag acctgatgat
    21001 tacaggtgac agaatccctg ttgtgaacga agaaaacaat ttccatgaca caatccagct
    21061 gatttccgca aaaaaactgg gatgtgcaat tattacagac caaaacggca taatgacagg
    21121 tatcttaaca gacggcgata tcagacgtac cctgctcaag tatgacaata cttctacact
    21181 caaagcaaaa gatgttatga cccgcaaccc taaaattatt atgacaaacg accttgcagc
    21241 aaaagctctg cacattatgg aaaaacactc tattacatcg cttgccgtgt gtgatgcggc
    21301 aggcagaccg gccggacttg tccacatcca tgaccttttg aaagcaggtg ttgcataatg
    21361 tacagcgaag aattggtgca aaaggctgca aaggttaaag cagcggtttt tgatgtagac
    21421 ggtgttatga cagatgcctc tctcactttt gatgaaaacg gtgttgaata taaaactttt
    21481 aatgcaaaag acggacaggg cgttattctg ctcaacaaag cgggaattgt aacagcaatc
    21541 atcactgcaa gagaaaatgg aacggttaga tacagattta aaaacctcgg tatgacaaag
    21601 ctctatgaag gctgtaaaaa taaaattgct gcgcttcgcg attttatgga agaattcaac
    21661 cttaagcctg aagaaattgc atacatggga gacgacctgc ctgatatttg cgttttaaag
    21721 acagtaggcc tgccatgctg ccctaatgat gctgtggatg aagtaagaga acatgccttg
    21781 tttatctctt caaagaacgg cggcagaggt gctgtgagag agatgtgtaa ttttatcctt
    21841 aaatcaacag gaaaatacga acaggttgta tctgaaataa ttaacaggaa ataattatgc
    21901 caaaaacgat tgctcttgtt tgtggcgcta aaaactgcgc agagaaagct tttagggatt
    21961 attttaaaga cagagatgtt gagattgtta aaacagattc tcttttagag gcgtctgagt
    22021 gtgatttgtg cgtgcttgac ggatacagcg ggcatttgag cgaggaaatg cttgagtgca
    22081 caaagttttt gaacatacat tattcgcttt tgcccgcatt tgattgccgg aaccctgttg
    22141 aagaggcttt taaaaccgga gtcaaagtca cgggggttac gctgagcctg cttgatgacg
    22201 acggtacaaa gggcagaatt attgcacaat atcctgtttt tgttgatttt ttcaccacaa
    22261 ttgatgaact cgaagacgaa ttgggaaaag tggtgcaaaa attggcccct tttgttgcga
    22321 agagcgtgct ggaggataag gttttcagct atgcagagct gttatcaaat cagggaggct
    22381 gttcgggctc ttgttcaggc ggatgcagct gttctgacga gcaggatagg gcatgacttt
    22441 tttgtaataa ttgttaaaaa tacactttat ttttaagaat tggatgctga tttttggata
    22501 aaaaaatagg gctttagtct gaaaaagccc tagctgtctg gaattaagaa tagttggaag
    22561 tatgaaaaag atttaattat atataacctt attttcatac aaataacaat tacccatgcg
    22621 ggtatttttg aataattctt ctgattttta tttttaatga ataaaaaaca tacaaaacag
    22681 ccgattaagt gtacaaaatg cactttttca agaattcaat aaaatcaata ctttcgggcg
    22741 catattaaga tttctttaag gggggttgac aaagaaacct ttatagtaca taatgaaaat
    22801 gtactaaata gtgtagttaa aacacttaat tcaacggtca caacataagg acaaaaaaaa
    22861 tgagagtaaa taatataacc ccaaactact caaacaatat aaataacaca aataaattat
    22921 acgcttcaaa acctgttttc aaacagagcc aaacagacag tattgttcct acagctatnn
    22981 ctattatgga aacactcgtt gaagctgcta atgacaaaaa aaatcaaaac gcattcatga
    23041 gcaaaattca cttctttaga gatgttcttt tctctgctga aacaacaaga aaagcacagg
    23101 aactcaaaga cgctgttgaa tctgctcaaa acataatgta ccttgcataa ggcgcattat
    23161 ttagccgaga cataataaca tttcccccgt tataaaattt ttaatttaat ttgaatagat
    23221 gcagtaaata cagaccaaac ggtctgtttt ttttatgttt tacatgtttt gtttaatcca
    23281 ctcaatcatc ggcaaaagtg ctctggcgcg gtgagacagg gtgttttttt cttccggttt
    23341 caggtctgcc atggttttgt tcaattcggg tataaaaaat atcgggtcat atccaaaacc
    23401 gtgtcctccg tggggttttg tgtcaatgta gccttcaatt tttcctgttt gagtgtgcag
    23461 ctttgtaccg tcagggttta caagggtcat ggtgcaggta aagtgtgcgt ttcttttgtc
    23521 tttagggatg ttttgcattt cgcccagaag tttttcgatt tttgattttt ggtcgggcgc
    23581 gtatcttgct gaataaagcc ccggtcttcc gtcaagagcg tctacgcaca gtcctgtgtc
    23641 gtcggccagc gctggaatcc ccattatttt tgcggcttct gctgctttta tgtatgagtt
    23701 ttcttcaaag gttgtgccgt tttcaacagg gtcaaactcc ccttcaacaa gcacaaactc
    23761 cacgctgtca gggtgtactt cttttatcat tgcgttaatt tcctcgagtt tgtgcgggtt
    23821 tgaggtgccc agtgctattt ttatcattgt tcctccgtta catttgataa tattttctca
    23881 aatcagcgca atttttgcaa ttcagcttta ttagtaaatt atgaatgttt tatgcacaaa
    23941 taatttgaag aataatttgt atacagtaaa accgcaaaat aagatttctt tcggtgtacg
    24001 gcaatcagct gctgacagct ttgagcgctt tgataataaa atttctcacg taacgcttac
    24061 ccccagcggg cgccttagca gcgtggtatt tagcgaagac acaactctgg ctaatgcact
    24121 gcaaaacctc gggtatacaa aaaacaaaac tcttgaatcc cttcttatcg ggcgtttgca
    24181 cccgcttgaa gaaattagac agatgcatgg cgatatttca aaaatcaaag atataaaaga
    24241 tataaaaatt aaaagcctta tggcccttgg cgcgacagca cttgtttttg agacggaaga
    24301 cggaaatgca ttgaaactta ccccgtatga ccattttcct tctaaaagac agcctgctga
    24361 ttttgatttg ccgtgtttca aaaaaggcaa atcaggttac acttattatt atttgcagga
    24421 gaaaatcacg caggatgatt tggcacaaga tgagctgcga agttttgtaa aaaatatcaa
    24481 aaaacagggg tataaaatga aggattattt gcttcattac acgcctgaaa atgtagatga
    24541 aaccataaga acagaccagt ttggcagggc tggaaacggg aaaatatatc ttatagaccc
    24601 gggttgtgca attccttcaa aagagttaca caacacggat tcgcttaata ttgttaaaaa
    24661 agcgcttaaa tattttggaa agtagttttt gcaagaatta tttcccgaat cttctatttc
    24721 tgtgttcaaa ttcaactatt gcttttgaga gctcgttttc gtcaaactcg ggccagtagg
    24781 catctgttac ataaatttca gagtatgcca gctgccacag caggtagttg cttattcttt
    24841 tttcgccgcc ggttctgatt aaaaggtcag ggtcggggat gtcttttgtg taaaggtgat
    24901 ttgagattgt atcttctgta atgtcttcgc ttttcagacc ttcttgtata atggctttga
    24961 gcgcgtttgt gatttcgtct ctcgagccgt agttgaatgc aatgttgagg ttaacgcctg
    25021 tgttgtcttt tgttttgttt tcagcatttt tgacaatatc aacaaggttt ttgctcaatt
    25081 ttgtgaggtc gcccaaaaag cgtattctta cgttttcttt gtgcatatca tcgagctcgt
    25141 ttaagagggt tttggccagc aatcccatca aaaattccac ttcttctttt tttctgttcc
    25201 agttttctgt ggaaaaagcg taaacagtaa gatatttgat accgaacctg tcaaaaaggc
    25261 gcatggtgct tcttaaagag tcaacgcctt tctggtgacc catggcagag ggaaggtgtt
    25321 tttctttggc ccagcgtctg tttccgtcca tgattatggc tatgtgtttg aggttggtgt
    25381 tttttacgat tgctttgata tctttttttt cggctgcttc cactgctcaa tcccttttat
    25441 tctcttgttt actcatatat tataaagcaa atatttgaca tatctataca tcttgtttta
    25501 catgtatgta actggtcgta aaacgcctca atggaattta aaccaaaact tgtgagaaag
    25561 gtacggaaag tatggaaaat gcaaatcagt tggatgaagt aaggagctct tttgataagt
    25621 ctatggatga tttttgtctt atttgcggtt tgtccaaaat tctattaaat attcttgaaa
    25681 atgaggacaa caatatacag gagcgtgaca aaataagcct tgcaactgtt cttgatcgaa
    25741 tgctgcaaaa agaaaagcaa aatcttgatt caatcagcac gaagattttt ggttattaga
    25801 cagttttttt aaaactgttt taagaatctg atatcgttgt tgaaaaacag tcttatgtcg
    25861 tcaatagccc atttgagcat tgcgagcctt tcaaccccca tgccaaaggc aaatcctgtg
    25921 taaacttctg ggtcaatgcc gacgtttttc aatacattcg ggtctaccat accgcaaccc
    25981 aaaatttcta cccagccggt tcctttacag aacggacatc cttttccacc gcagatatta
    26041 cagctgatat ccatttccgc acttggctcg gtgaagggga agtaagaagg acgtaaacgg
    26101 atttgagttt cggcaccgaa catttccttc gcaaataaaa gcaatacttg tttcaggtcg
    26161 gtgaatgaca cgtttttgtc aatatagaga gcttctacct gatggaaaaa cgcatgtgca
    26221 cgatagctga tagcctcgtt gcgatatacg cgccccggac aaataattcg gatgggtggc
    26281 tgggtgcttt ccattacccg gctttgtacg gatgaagtat gcgtgcgcaa aatgacattg
    26341 ccctgtacat gctcagggtt ggcttcaacg aagaaagtat cctgcatatc gcgtgccgga
    26401 tgatcttcgg caaagttcat ggaagaaaaa acatgccagt catcttctat ttccggtccg
    26461 tcggcaatac tgaaaccgag acggtggaaa atatcgataa tttcattctt gacaatactt
    26521 aacggatggc gggttcccaa ttcgatagga tatgccgtgc gggtaagatc catttcagcg
    26581 gcaccgttgt cttgtgtttc aaaagcttcc ttcaatgtgg atatacgttc ctgagccttg
    26641 tttttcagct cattcagttt cattcccact tccttctttt ggtcggcagg tacattgcgg
    26701 aagtctgcca tcaactcatt aattgctcct tttttactga gatatttaat acggagggct
    26761 tctaattcct ctgcattagc agcgtgtaag ccttcaattt cctgaagtaa ttgttctatt
    26821 ttagctaaca tagtttcttc tttatttttt aatgaccgca aagttagcga attaaaccga
    26881 atattttgct gaaaactaaa aaaagagata cttttgcatt gattttttct aaaaatagaa
    26941 aatgaagaaa ctgattatcg gagtttgtct gcttgtgctg attagctcct gtggaggtgg
    27001 taaaaagaaa atagacccct tcgagatgct cactgaagag attgattcgc tggctgccgt
    27061 tcctgatacg gtggaagtga tggaagtggt ggaagaagaa ccgatggttc cggctaccgc
    27121 agatgaaagt tttgccgact ttatctacaa ttttgcaatt gacgaaaagc tgcaagtgtc
    27181 gcgtattgtg ttccccttgc cttattatac gatggataag aaggaacata tcgaaaagaa
    27241 agattggaaa cacgatccgt tgttcagcca attggactct tatactgttc tttttgacaa
    27301 ggcggtggat atggaagcgg aaaaggatac tactgctacc agtgtgaaga ttgagtggat
    27361 ttatctgaag acaaacaaga ttaagagata ttattttgaa cgtttgaagg ggttgtggaa
    27421 gttggaagcc attgattttg cagatatgcc ggagaatgag gacagcaagg agagcttcta
    27481 tgagttctat gaacattttg ccaatgattc tcttttccag caaacacgcc ttcataatcc
    27541 attgaagttt gttacggtag acccggacga tgaatttcaa ataattgaaa ctacccttga
    27601 ggcaggacag tggtttgctt ttcagccggt acttccccgc gagtttctga caaatgtaaa
    27661 ttatggacag aatgagaatt ctaaatcgaa tacaaaggta attgagataa aaggattcgg
    27721 taatggattt aataatacgc tttactttga acggcgcaat gggttgtgga aattagtgca
    27781 gtttgaagat ttaagcgatt aaccctgtta atgactgatg aaagaaataa aggagtattc
    27841 attgttgccg cataatactt tcggcatgga tgtaaaggcg tctgtgtttg tagaatatgg
    27901 gtcggttgct gaattgaagg ctatattatc aaataaggat tatttaaaac cgtcatggtt
    27961 gcatattggc gggggcagta atttgttgtt tacggcagat tatgaaggaa ccgttctgca
    28021 ttcggccatt catggttatg aagtagtgga tgagaatgat aaaactgtcg acataagggt
    28081 aggagccgga gaggtatggg atgattttgt ggcttttgcc gtgcggcacg gatggtatgg
    28141 tgcggagaat ttatctttga taccgggaga agtgggtgct tcggctgtgc aaaatattgg
    28201 tgcatacggt gcggaggtca aagatttgat tgtttcggta gaaacactgg aagtctctac
    28261 ggggcaggaa cgtgtgtttg ctaatgatga gtgtcactat gcctatcgtg agagtatatt
    28321 caaaaaagaa ttgaaaggaa aatatatcgt tactcatgtg acttaccgtc ttggaaaaca
    28381 tccgcttttt aatctcgaat atggtaatgt gagaggtgaa ttggagaaac gcggatgcga
    28441 gataacattg gacaatgtgc gtaatacagt aattgagata cgtgaagcaa agttgccgga
    28501 cccgaaggtg caaggcaatg ccggaagttt ttttatgaat cctgttgtat cgcgtctgca
    28561 attcgaagca ttgcaaagag aatatcctga gatacctcat tataatatgg gagaagatag
    28621 ggtcaagatt ccggcagcgt ggatgattga tcgttgcggc tggaaaggta aacaggtagg
    28681 caatgcaggt gttcattcca aacaggcttt ggtattggta aattgtggag gagctaccgg
    28741 aagagaaatc gtagatttgt cccggcagat acaagagtct gtctttttga aattcgggat
    28801 aactgtttct cctgaagtga attttattta actgttatat gaagattaca atactaggca
    28861 gtggaacatc tacgggagta cccgaaatag ggtgcaaatg cccggtttgt accagcaatg
    28921 atcctcggga taaccgtttg cgttgttcgg gactgataga aacagaggga gtgcggattt
    28981 tgatggattg tggtcctgat tttcgtgaac agatgatacg tctgaatgat tttaaacccc
    29041 ttgatgctgt attcatcagt cacgagcatt atgatcatgt gggtggcttg gatgatttac
    29101 gtcccttctg tcgctttcgt gatgtgccgg tttatgcgga acgatatacg gcagagcgtt
    29161 tgcgtcaacg tattccttat tgttttgcag agcatcttta tccgggagta cctcgcatcc
    29221 tgttgaagga gattgtgccg gattcacctt ttacggttgg caactcgaag gaagctaagg
    29281 tagagattat tcccgttcgg gtgatgcatg gcaaacttcc tattttggga taccgtattg
    29341 gtaatatggc atggattaca gatatgctga ccatgccgga gtctgagtat gagcttctga
    29401 atggactgga tgtactggtg atgaatgctt tgcgtcccca atctcatagc acacaccaaa
    29461 atctacagga agcattggac aatgcaaagc gtatcggagc taaagaaact tattttattc
    29521 acatgagcca tcacatggga ttacattcgg aagttgagaa actgcttccc cctcatgtgc
    29581 actttgctta tgacggagaa gtaatttctg tcggttagac tgtcggtttt aatgaatatt
    29641 ggcaaagtcc gtttagcccg cattcttcac atttgggagt tctggccatg catacatacc
    29701 tgccgtgcaa gatgagccag tggtgggctg tcggaacgat ttctttcggg atgtatttca
    29761 tcagatattt ttctgtggcc agcggagtag tacaagtttt cggtaccaag ccgatgcggt
    29821 ggcttacgcg gaaaacatga gtatctactg ccattgttgc tttattgaat accacgcttt
    29881 gaattacatt ggcggttttt cttcctactc ccggcaattt tatcagctct tccagtgtac
    29941 cgggcacttc actatgaaaa tctttaacca gcatctgtgc catgccgacc agatgttttg
    30001 ctttattgtt aggataactc acactgcgga tgtattcata aatgacttcc ggcgtagagg
    30061 ctgccagggc ttccggtgta gggaaatccc gatagagagg cggggtaatc atgtttacgc
    30121 gtttgtctgt acattgtgcg ctgaggatga ctgctatcag cagctcgaac ggattgttat
    30181 aatgcagttc cgtttctgca acaggcattg cattttgaaa atacgttatt accttatcat
    30241 ataattcttt ttttctcatg attgtccttc acttattccc gaggtcttta atttaaatta
    30301 gttacaaaga taatactgtt tctcaaaaaa gtgcgtatct ttgcatccga attagaaaaa
    30361 atagacgtat gatgccgt
//
LOCUS       DABS01000128           22619 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_14383, whole genome shotgun sequence.
ACCESSION   DABS01000128 DABS01000000
VERSION     DABS01000128.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 22619)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 22619)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22619
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            300..1793
                     /locus_tag="CPT85_05410"
                     /pseudo
     CDS             300..1793
                     /locus_tag="CPT85_05410"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    729..748
                     /estimated_length=20
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1857..3095
                     /gene="glgC"
                     /locus_tag="CPT85_05415"
     CDS             1857..3095
                     /gene="glgC"
                     /locus_tag="CPT85_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010150265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="DAB23140.1"
                     /translation="MAADDTLVMILAGGEGKRLYPLTRDRAKPAVPFGGRYRIIDFVI
                     NNFINSGFYKLKILTQYKSDSLNKHIVRTWPLSPIINQYVDLIPAQMRIDGHWYKGTA
                     DAVFQNIHHILAEEEAKYIAVFGGDHIYKMNVEQMLDFHKQNNADLTISAIPIPIEEA
                     GEYGIMEVDDNWHLTNFIEKPKTTPKHLPGDPTKCLASMGNYFFNRNKLIKELRIDAD
                     IQVSNHDFGKNVIPKMLEQGDRIFVYDFAQNTFPGMEESERGYWRDVGTMDAYWQANM
                     DLLAYDPEFNLYTKEWPLRTFNYNYPPAKFIWEELERRGLATNSLVSEGCIISGGTLS
                     RCILSPKVRINSFSSVVDSIIMENVNVGRHSHIKKAIIDKNVDIPPYTKIGFDRKEDE
                     ERGFYVSEGGVTVVPKGAKL"
     gene            3098..3568
                     /locus_tag="CPT85_05420"
     CDS             3098..3568
                     /locus_tag="CPT85_05420"
                     /inference="COORDINATES: protein motif:HMM:PF13899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23141.1"
                     /translation="MNKKLKTLLVSLAVLALVGVSAACFAILPKANMKPSDYDLGVTY
                     AQASQEDKPMIAVFYVDWCTYCKKFMPRLDKVRNITKDEFNVVLINVENPENEKLVRE
                     YQISGYPTVYIIDSKFDYRSHIDNPALESVDSFNKEVQRYANLRKLIKKSELCK"
     assembly_gap    3735..3736
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3761..4195
                     /locus_tag="CPT85_05425"
     CDS             3761..4195
                     /locus_tag="CPT85_05425"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23142.1"
                     /translation="MEHGIIKHWAKKTSEDKLFSTYFIPYFSVLEKQSEKSVTTKDGI
                     SYSLDSCEKKSSSSTDLGSCIIKADINGLDKEPNLKGKDKFNFKLDFVEEKLIPVDET
                     KELYNNGWKFTDELWSREVSADDDSSTDADSDTGSKDSGQDD"
     gene            4294..5478
                     /locus_tag="CPT85_05430"
     CDS             4294..5478
                     /locus_tag="CPT85_05430"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MexE family multidrug efflux RND transporter
                     periplasmic adaptor subunit"
                     /protein_id="DAB23143.1"
                     /translation="MNKKTLIWIIIAAIIIVPIAVNKIASFISAKIAAEMAKKPTPVE
                     IAYSTEDTVLPKTESVGRIEAKYSVDVVARINGWLQKRYFQEGAFVKKGQTLFLIQPN
                     EYAIAVQQAEAAVKQSQAALINSQKELVRAKELVKNDFVSKSYYDNALATRDQNKAAL
                     DVNKANLAAARLNLSYTKITSPVDGKVGKILITEGNLVNAQSGPLTRIVSTSPIYAYF
                     TIKSEDYLKYMKNAIDPKCCELSGMDVKIRLSDGTEYTEKGVLEFVNNEVDQTAGTIS
                     LRATFQNKDNLLVPGDFVNVTAIAKKPVKVTLVPQIAVSDSSNGTYVWVVDDKNIAQQ
                     KYITIDKQEGENWIVLEGLEPGEKVIKAGFQRLRPGSLVSYDETKQIANTEEKEIDGQ
                     KQ"
     gene            5462..5851
                     /locus_tag="CPT85_05435"
     CDS             5462..5851
                     /locus_tag="CPT85_05435"
                     /inference="COORDINATES: protein motif:HMM:PF00873.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23144.1"
                     /translation="MDKNNNQSSQNNATDKKNLYFFIQKPRFAMVISIFITLVGIIAM
                     MGLKLEKYPNITPPQIMVSASYPGASADVVESSVASLLESQINGVEDMLYMISTSSDE
                     SYQLQIYFKVGSDRNIDLVNVQNRIXA"
     assembly_gap    5843..5844
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <5845..8681
                     /locus_tag="CPT85_05440"
     CDS             <5845..8681
                     /locus_tag="CPT85_05440"
                     /inference="COORDINATES: protein motif:HMM:PF00873.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydrophobe/amphiphile efflux-1 family RND
                     transporter"
                     /protein_id="DAB23145.1"
                     /translation="PEDVKRLGVTAKQQVSGAGVAILNLASTDGRYSQLDVTNYASIF
                     IKDEIARLPGVGEVNVYGAGNYSMRIWLDTEKMANLNVSVLEVQNAINTQNVQVSAGA
                     LGQEPGPDKQRFQITLRTKGRLLEPEEFENIIIRSNQDGSSIKIKDVARVELGSETYS
                     RNGRVDGKPAALLQIVQIPGANAIEIVNEVEAKMAEISKTIPDGMELAMVHDDTLFIR
                     ESMKEVIKTIIETSIIVVAIIFIFLGDPRATLVPLIAIPVSLIGTFAALPVFDMSINL
                     LTLFAMVLAVATVVDDAIVVIENVKRHLEDGKSPVEATQITMQEIGGALVSMALVLMA
                     VFVPVSFMPGLSGLMYKQFAVCIAISIALSAVCALTLSPALCSIILRHEDPNRKPSNK
                     ISAAIKWVFMEFNVYFQKLTDLYLHYVKKFVYNKKLTLIVYGAIIALMLVLFKVIPTG
                     FIPDEDQAVLMAQINLPAGASLARTTDVTERMDEMLQNTEGVEGRIVFVGMGPSNQAF
                     MVIRLDEWEKREFNIFQKAIRKMQGKETDLSLNAILGRIRKDFSTIRDAQIGVFSPPA
                     ISGMSMVGGFEFQMLSKGEYTPQEMEQYANKLIMAANQNKDLTNVYTQYQANMLQYIV
                     DIDYAQAMAQGIDLTELYSTLSSTLGTYYVNDFNKLGRVFRVQLQAEQKFRRSANDLT
                     GIYVKNSAGKMVPITTVVSLKQSVGAGSITRYNQYRNVQFSGQPATGRSSGEAMKAME
                     SVANAELPKDMGFEWSGTSKQEIESGGQTGTIIALALIFVYLFLVALYESWSIPLAVL
                     LICPLAAAGALIFQLIMGQAFDLYSQVGMIMLIGLAAKQAILIVEFAKVLHEEDGMTI
                     EEAAVEASRIRFRAIMMTVVAFVVGMLPLILAHGAGASSRISVGSTVFGGMLAAGTLG
                     TIMTPAFYVIIQHLVDIVMNKKQNVEGEQK"
     gene            8706..10442
                     /locus_tag="CPT85_05445"
     CDS             8706..10442
                     /locus_tag="CPT85_05445"
                     /inference="COORDINATES: protein motif:HMM:PF02321.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23146.1"
                     /translation="MKKTFKTLIISTIIASSLTCYSGNAFAVGLNFFKKHDSVNNESV
                     KETPKADKANKLNKSNKATKSTKAAKPKKAKKPKKEKYDDTEVKAKTDINQPSVKIII
                     KDDKKKKAEKEPKIKQKRFKKPKASKAKNQTPDLQEVKLKQEQNPTLQQEGDAFSAST
                     QPAMEGAVSATRIVSVDDCVKIALENNPTILSQLISKDIYKNKIAQAWSNYFPKLNAG
                     ISYSKNDMLMTNFKFPMQEYSLWNLPNVGFNQLIYDFGKTGAQAGVAKKTYEASRETL
                     QSSINDVVYQVKNAYFNQLFLQQQAEVYEDSVLQYQIHLKQAQAYYAIGSKAKIDVST
                     AAYNLDNAKLTLIQAKNAIETGFATLTNAMGVPESKPFDIQDRLDRKRYDITFDEAFK
                     IASDQSPALAAAKKKMEGSKLLVKSSKVAFLPDITGFGSYTKGGKLPGTDYGYQIGAQ
                     VSYSNLNLLLLKQQVDEATLTYKKDQADYETQRQKTYLEVKQAFIQLKNSQQSIPVAK
                     ASMDVAKERYDLAAGRYKVGLGDAIELKDAQIEYVNARLQYYNTLMQYHISAANLERV
                     IGAPLSASDVNL"
     gene            10483..11079
                     /locus_tag="CPT85_05450"
     CDS             10483..11079
                     /locus_tag="CPT85_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011213184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition protein"
                     /protein_id="DAB23147.1"
                     /translation="MNYIWFLIILISIMSAAVTGKIDALVQSVMSGAQKSIEVAIYLA
                     GIMAFWLGIMKIAEKSGLVAAIARLLTPVAKKLFPDIPDGNPAVGDIAMNFTANAFGL
                     SNAATPIGIEAMKKLQQLNKDKNSASNDMCTLLAMNTAGWQLVPTTVIAVLAASGSKN
                     PTEIVFPTLIVTTIAFLSAIVGVKLLERIWPAQIPVXX"
     assembly_gap    11073..11074
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            11091..11633
                     /locus_tag="CPT85_05455"
     CDS             11091..11633
                     /locus_tag="CPT85_05455"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="spore maturation protein"
                     /protein_id="DAB23148.1"
                     /translation="MPMFKSLIYSISAWIIPSIILITLVFAVVKKIPVYETFIDGAKD
                     GLKVTVGIIPYLIAIITAVSMLRASGAIDLAARAFSGCLDYFKIPVDVVPIMFIRSLS
                     GSAVLGLFSEIAGNFGPDAYATKLAAIMVGSSETTFYVLSVYFGAVGVKKFRHSLCAG
                     VFADIIGIIAAVLVARWLFL"
     gene            11643..12461
                     /locus_tag="CPT85_05460"
     CDS             11643..12461
                     /locus_tag="CPT85_05460"
                     /inference="COORDINATES: protein motif:HMM:PF00497.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23149.1"
                     /translation="MYMLKKTILCLMMLSVFVLTGCSRHNETSEDNDTLTQIKKRGEL
                     IVGVKYDSKPFGFIKDGKLQGYDIDIAHLMAKRILGNEKLIKFVEVDAQNRISKLNSG
                     EVDMVIATMSINPKRAEVVDFSLPYYYAGQAIMIRKGTAIKTVGDLNGRRVIIVLGTT
                     GEKNIRFLAPEVILQGYKTYQDGFNAFLDRKAEAMTSDDSILAGFVMDHPEFMILPQR
                     YSQDGYGIAFRKEPQSRALKSEVNIAIGELRRKGYLNFLKSKWLPSASGNFKEK"
     gene            complement(12465..13493)
                     /locus_tag="CPT85_05465"
     CDS             complement(12465..13493)
                     /locus_tag="CPT85_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011024731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23150.1"
                     /translation="MDAILHGILTILNLFLIVGCCVVFTNAVEHLGKIYNLNEGAVGS
                     ILAAVGTALPETIVPLVAILGAYLAHTDVHVGKEIGIGAILGAPFLLATLAMFVTGLA
                     VVILRSLGKREHKMNANYVVMFRDLKFFFFSYTLAIAAGFIHIPFIKYICAAALVGYY
                     LVYVFRTLNCSHSACGEVAEVDELLFERIFKKYNTFLVWLQVAVSIGALIFFAHMFVG
                     QIRFFADLFHINPLVLSLILAPIATELPEKFNSVLWVSQNKDTLALGNITGAMVFQSC
                     IPTAIGILLTPWVFGAESVINIILVYCSTILLFINLYRDKAFSAHILITCGVFYVIYL
                     VYIFWKMI"
     assembly_gap    13621..13622
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            13636..14502
                     /locus_tag="CPT85_05470"
     CDS             13636..14502
                     /locus_tag="CPT85_05470"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01368.18,HMM:PF02272.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23151.1"
                     /translation="MCALYNAIKTNFAKEADMVYAGIIPEIYHFLPDIDKAKPAKDLA
                     GKKYDLAIAVDVAAKDRMTDGLGIFDSAKKRINIDHHKTNNNYGDINFVRGDASCAGE
                     VLLDICEALALKIDKKTAWGIYTALLTDTGGFRYENTQAVTLEKAARVIQYGADPALI
                     SRYCYESKPKNMVMLHANCMVNAKFYDDNKIACVCITNADMAKFQAKNDYTEGIVEDL
                     RRIDTTEVSFVLKEVDDNTTKASLRSKSTDVSEIAQVFGGGGHKFAAGCTIRKPINIA
                     CDKMLDEIRKVL"
     gene            14499..15353
                     /locus_tag="CPT85_05475"
     CDS             14499..15353
                     /locus_tag="CPT85_05475"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="DAB23152.1"
                     /translation="MNIIIEKTVNYLKNLINRIIIDDFMGMAAEMGFWFAIGIFPFML
                     FMMSFFSIMGKKSLFTPIIAFLDSVAPTDSVNLIKEVLNEVLIFEHGGIVAVFGFFIT
                     VFLSSNAIFCIIKGLNRALGIDEHRNLISTRILSILMVFVNVFVMFITINLIIFGKVL
                     IQFALNFINIPLGAINIFLVSRWFVSFIALYIMAYLNYFLLPAWQGSDKIKSKSSLPG
                     TLFFCFCWMFGSWCFSLYINNLHTYNRVYGSIGAFVMLMVWLYYTSLILLVGGEVNSQ
                     AYRRLNSK"
     gene            15447..19139
                     /locus_tag="CPT85_05480"
     CDS             15447..19139
                     /locus_tag="CPT85_05480"
                     /inference="COORDINATES: protein motif:HMM:PF05394.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23153.1"
                     /translation="MGLEDGKFTLGYINAKLNALFFEKKDSATSVESAFDNREWYEKS
                     KYDDYSLGLSIERCAQSAEVQPFKSSMSKTSAKTTPAASEKNDPAIQQEKKDAAVSSI
                     KNSVGRAIGSVYKKTSQQGAVSDVYNDFKELSSSELAQSAVLRNLYAEAASTELLERA
                     KDGNLTVKEYYEAKLQLAMSLLPTDGLSDEEKNLLKQHLASYTKEQLAIFIDKIKYCD
                     SKEYDSLADTVKKMVAQAKAGKSAENAGPMSVAALMEDSVSNEPMTFEQVYFIERGVA
                     YDSDNIDDYNKKAVMYAQCANVVARQQNVHTHLDEALQNLKLASQGAENPQVLDRLQK
                     NLEVGILASLKELYGNDEQAIQNALKQITGDDKITYKDGKLVSSLPQAINSYSLRMIA
                     EKLIKQTDENAAKILNGKSIEDYERKMADSYKLAYGEKNARQLAQAFEDDQEQGVQHI
                     KTGVAIASGAVAAGSMLLFPYCTPMVGKAVIATGSLVGIAGASSVDIVENTTKYGGIT
                     EEEKREIAKEISQNALLFVASMGAGNIGNGAKAALLAKNCPKLMAVGADIGIDSTISL
                     LSDLAITGQIDLSAEGVSQLISQLTGVLASKAAAKRTKANTAEISTSQKNENNYHNQT
                     RTTNNTSDIKEFLQSPKIKDEMRADVYKLVKEHPETIDALRKMYDAPAVMSDDFYMTM
                     HELLAKYPDKAQQIVDDMYCVSNFKNKKYGSEFLGGDEAELIKYLAQQSEQGRDNAYL
                     LLSSNDRFKISKAANVNPFRQLDELKKQYPQYEEDINNLALNTGRSYSKIESIIKNLS
                     PENADEILHIASKNSNLNIEHNTNSFKILADLKKQYPQLSDSIVELACNKNMDIIGLQ
                     KLIALMDAHPEFKTDIMRLSSEKMFDYDNIFKTLQDFQAHSEFRDIMFNPKKTDVNYI
                     SKEAPSPELKNKREAILKNIAKEVDGTQLKRLKSALGDKIYNIEWEKLIPPNASKSEI
                     QKIFSDIYERTKFFARLKNLEDAHGKNGRWASEMNDISDKAAIRIKSGESFEDVISNI
                     ANDVRNDVKSHKRINESGANNANNEAGVPRNTYDVCDLEYQTPYDDYYYGEYKKYFDK
                     IRSKKPPRQSPYPDMTVTNVIPELGLMVHPKASQSYDAGMRHINDRYQELTPFIEKVN
                     SGQPLSKADLKQAKAKIAEIHYLLANIMPYRRGSAGIADAMTRALCKSLGIDLPPLRK
                     GVALDLEAFHLNLDEYIDKWDSFFDY"
     gene            19169..19534
                     /locus_tag="CPT85_05485"
     CDS             19169..19534
                     /locus_tag="CPT85_05485"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23154.1"
                     /translation="MEINKIYTPITEDTRSTKIISQGEFNTGKNMNKNTDKLISLMTA
                     MYEMPKTEITSLLDKYGTKIHSSNEPERDFYSVENGFVKEMNGFAAKSQAEVLRALKK
                     TDIKIXXMLKQHRIHIILL"
     assembly_gap    19491..19494
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            19609..19791
                     /locus_tag="CPT85_05490"
     CDS             19609..19791
                     /locus_tag="CPT85_05490"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23155.1"
                     /translation="MKDIVKLGKMNIANDSVFKNPNSLFVTPDGAHIVAADWSRTGYL
                     YPQQAAEYFDNIKQIL"
     gene            complement(19746..20423)
                     /locus_tag="CPT85_05495"
     CDS             complement(19746..20423)
                     /locus_tag="CPT85_05495"
                     /inference="COORDINATES: protein motif:HMM:PF00717.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23156.1"
                     /translation="MKLYEAIEELTGKLRRKVSYTDIAIALDVTRQYANQIKDKELSC
                     EQLERLDKHFDVNLASANTLPKIQNTEDCISIPVLGEVSASMGYGVTVYNEVQTAIYS
                     ISRQLAKDLGVSTSQTEMIFAQGDSMMPTIEGGDSLLVDHARKEIYDGKIYCVRIDGQ
                     LYAKRLQKIPPDTVVIVSDNPKYRSFEIDLRRCPDYDFEVIGEIRWXQDNDYNICFML
                     SKYSAAC"
     assembly_gap    19803..19804
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            20677..20901
                     /locus_tag="CPT85_05500"
     CDS             20677..20901
                     /locus_tag="CPT85_05500"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23157.1"
                     /translation="MIIAKNIYNTKTLLGMLDLAIDTLIENDACSCCKIFPYKDERCS
                     QIDLCKNFIFEGLLNIYRRRKKDKKTNFPY"
     gene            20998..21192
                     /locus_tag="CPT85_05505"
     CDS             20998..21192
                     /locus_tag="CPT85_05505"
                     /inference="COORDINATES: protein motif:HMM:PF00196.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="DAB23158.1"
                     /translation="MHEKFFNKLNDEQKDIVKLVKQGLTNIEIGVELGYSADSIKKRL
                     SVIYKKFGVRKRIELIDLIS"
     gene            21205..21849
                     /locus_tag="CPT85_05510"
     CDS             21205..21849
                     /locus_tag="CPT85_05510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007489085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="DAB23159.1"
                     /translation="MIDTVIFDLDGTLLYTLENLHLSTNYALDKYGFKQRTLKEIRSF
                     VGNGVELLIKRAVPDDTDEITTAKCLADFKEHYAATMYDKTRPYDGIVEMIDKLNADN
                     IKCAVVSNKFDAAVKELCERYFGKRILYAVGERDGIRKKPAPDSVLEVIRQIGGKNCV
                     YVGDSEVDIQTAQNAGIPCISVSWGYKDTDYLQMQGAELIAGDVASLLNCLYKI"
     gene            complement(21853..22197)
                     /locus_tag="CPT85_05515"
     CDS             complement(21853..22197)
                     /locus_tag="CPT85_05515"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23160.1"
                     /translation="MGSSFSRITKDFELKLVHDEDSQVLKNADEIMDAIKAARRRIKE
                     RLDILESISSPTSEDEREIAVLIRXRPVFFCSTKQTKIRAGTNIFCRKKRRMRGQLHL
                     SGCFAMVSTAKT"
     assembly_gap    21991..21992
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    22373..22374
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            22502..>22619
                     /gene="rpsP"
                     /locus_tag="CPT85_05520"
     CDS             22502..>22619
                     /gene="rpsP"
                     /locus_tag="CPT85_05520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00002"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="DAB23161.1"
                     /translation="MVKIRLKRLGYKKNPTYRIVVINDLQKREGKPICELGHY"
BASE COUNT         7619 a         4048 c         4466 g         6448 t
ORIGIN      
        1 atcaagtttt gcactgataa gctgtccggg ttttacttcg tttagcccgg catgtgctgc
       61 aagtattttt tccgcaatgg tcataggtct tgtcataggg tgctccttat attttttctt
      121 tattttatta caaatataca aatgttaaaa aacttttaca gttcccaaaa accgtatgtg
      181 ataccctttc tgacagtaca gtacaggagg cgaaatagtc tctgcctaaa gctcttacta
      241 aaaccaaccg ataacaaaaa cataaaatgg aatgaagtaa aatgaaaggg tgtgcgaaaa
      301 tgggttggtt ctcaaaaaaa atgaatatag atgaaggcaa aaaatatgac gtgtcacaaa
      361 tttcaaaaga cggtgtgaca caagaagaag ctgtaaaaaa taataaaaaa ttgataaatg
      421 ttttcaaagc tttcaatttc caaggaggag aaaaacttga agacatagaa ctagccagtg
      481 ccatggatgc ttttgaaaaa atagattccc aatttggaaa taaagacgga aaactctcca
      541 aagctgaact ggaaaaaggt gctgcctggc tcaataaaga actcggcctc acaggcgacg
      601 atgctattga tagaaaagat ctaaaagaat ttattaaaaa tataagacaa gcaacaaaaa
      661 atgacacaaa agtctctaca gataaggtga tatcagactg gcaaagagaa caaacagaag
      721 ccgcaatgnn nnnnnnnnnn nnnnnnnngg aaacacctgc acctgaacaa aaagaagtcg
      781 aaaaacctaa agaaaaaccg gcagagcttt ataactacgt tgtccaagca gacgaaagct
      841 ttacggatgt gattaaaaaa tccctgcagg cacagggtaa agaattaaca cccgaaaata
      901 tacaagcagc aaaagaacag tttaaaaaag ataacgaagg cgctgtaaaa accgctaaaa
      961 acggcataga atacctgctt gtcggcgcaa aagtaaaact gcccggcaat gtcgaaagcc
     1021 caaaagactc tgctgcagcc ataacagaat ggtcagaaaa acatgcttcc cctgtgcaag
     1081 atccccctgc aaaagaaaaa gctccggcaa aagaatcacc tgaagagaaa aaagatgtgc
     1141 ccaaagataa agaaggcgca ataaaagcta tgggtctaaa agaaactttt gcgtcaaaat
     1201 caatgaacta ttatgttgat ccaaaaacca atcagcatta tgaatggaac cctgaaacaa
     1261 atcaatttga agctctaagt gaagagggtg caatggttgg taaaaatgga agactatata
     1321 ataaagatgg aaaagccctg ggctcaggtt catacaggct gctgaaagac ggacgagaag
     1381 tgtatacaga tgatgatggt tcaactgaca caatctcata taatgataaa ggtaaagaaa
     1441 taaagtgtgt taaaaaagac aaagatggta atctgacttc tatattaaca tactcatatt
     1501 ctgcggatgg taagaaaaat ggttgtaaaa gaatagatta ttaccctgac aaaaaaatga
     1561 aacaggtaac ggacttttca tatgatacca gtggtaaaga aacaggtcaa ttagcaagat
     1621 tctattctcc tgacggaaag ttagaaaaca taaatcaatt tactaacggt aaaaacggct
     1681 cttatatagg ccaagaggtt gatgcttcag gaaatcctat cggtgagccg tggtatatga
     1741 attcaaaaaa tgaattgatt accaaagaag aatacgacaa attgcaagaa tagatagtta
     1801 tatgatatga ttagtgtatc ggttaattaa aaaaataaga attcgggagt tggtacatgg
     1861 cagcagatga tacactggta atgattcttg caggcggcga gggaaaaaga ctttaccctc
     1921 tgacaagaga cagggcaaaa cccgctgtgc cttttggcgg acgctatcgt attattgatt
     1981 ttgttataaa caattttatt aattccggat tttataaact aaaaattctt acacaataca
     2041 aatcagattc gctaaacaaa catatcgtgc gcacctggcc tttgtctccc attatcaacc
     2101 agtatgttga cctgattccg gcccagatga gaatagacgg tcactggtac aaaggtactg
     2161 ctgatgctgt gtttcaaaac attcaccata tcctggctga agaagaagct aaatatattg
     2221 cagtatttgg cggagaccac atctacaaaa tgaatgttga gcaaatgctg gattttcata
     2281 aacaaaataa tgcggatttg acaatctctg ctatccctat tcccatagaa gaagccggtg
     2341 aatatgggat tatggaagta gatgacaact ggcacttaac aaactttatt gaaaaaccaa
     2401 aaacaacacc aaaacatctc cccggtgacc cgacaaaatg tctggcatct atgggaaatt
     2461 atttctttaa cagaaataaa ctgattaaag aattacgaat cgatgctgat attcaggtat
     2521 caaatcacga ttttggcaaa aatgttatac ccaaaatgct tgagcagggt gacaggattt
     2581 ttgtgtacga ttttgcacaa aataccttcc ccggaatgga agaatctgaa agaggctact
     2641 ggcgtgatgt gggaacaatg gatgcatact ggcaggccaa catggacttg cttgcatatg
     2701 atccggaatt taatctttat acaaaagagt ggcctctgag aacttttaac tacaactatc
     2761 cccctgcaaa atttatctgg gaagagttgg aaagacgcgg tcttgctaca aactctcttg
     2821 tttcagaggg ttgtatcatt tcaggtggta cactttcaag atgcatactt tctccaaaag
     2881 ttagaatcaa cagtttttct agcgttgtcg attctattat tatggaaaat gtaaatgtcg
     2941 gcagacactc gcatatcaaa aaagctatca tagacaaaaa cgttgatatt ccgccttaca
     3001 caaaaatcgg ctttgacaga aaagaagacg aagaaagagg cttttatgtt tcagaaggag
     3061 gagtaacagt tgtaccaaaa ggagcaaaat tataacaatg aataaaaaat taaaaacctt
     3121 actcgtatcc cttgcagtgt tggcactggt tggtgtatcg gctgcctgtt ttgctatttt
     3181 gccaaaagca aatatgaaac catctgacta cgatcttggc gttacttatg cccaggcatc
     3241 acaggaagat aagccaatga ttgcagtatt ttacgttgac tggtgtactt attgcaaaaa
     3301 atttatgcca agactggata aagtaagaaa cataacaaaa gatgagttta atgttgtgct
     3361 cattaatgtt gaaaatcccg aaaatgaaaa gctggtgaga gagtatcaaa tcagcggtta
     3421 tcctaccgtt tatattattg attccaaatt tgattacagg tcgcatattg acaaccctgc
     3481 tttggagtct gtggattctt tcaacaaaga agttcaaaga tatgctaact tgagaaagct
     3541 aattaaaaaa agcgagcttt gtaaataact gttatgaaag gttttgaaat gttgtttaat
     3601 aaaaaattaa aagcaatgac ttatgttgag cttgcacttg tacttactat tatcggtgta
     3661 attgccgcaa tgacaatacc acagctcaaa aaatactctc aacgtaccga ctacgaaaag
     3721 agagtacaaa aagcnngagg aagttattga taatgctgtg atggagcatg gtattataaa
     3781 acactgggca aagaaaacaa gtgaagacaa gcttttttca acttatttta tcccatattt
     3841 ttcagtgttg gaaaaacaaa gcgaaaaaag cgttacaaca aaagacggta tctcttacag
     3901 cttggattcc tgtgagaaaa agtcatcctc ttcaaccgat ctcgggtctt gtattatcaa
     3961 ggccgatatc aatggtttag ataaggaacc aaacttaaaa ggtaaagaca aatttaattt
     4021 taagcttgat tttgttgaag aaaaacttat ccctgtagac gaaacaaaag agctctacaa
     4081 taacggatgg aaatttacag acgaattgtg gagcagagaa gtctctgcgg atgacgattc
     4141 atctactgat gctgattcgg atactggctc aaaagatagc ggccaagacg attaaagtat
     4201 cctccgcttg tactattgca aaattgttgc gttaatataa aattgttgtt atgataacaa
     4261 ttagcaaatt gtacgggaag aggattaatt ataatgaata agaaaacatt aatttggata
     4321 ataatcgctg ctataattat tgtccctatt gcggtcaata aaattgcaag ttttataagt
     4381 gccaagatcg cagcagaaat ggctaaaaag ccaacacctg ttgaaatagc ttattctaca
     4441 gaagacacag tgctccctaa gacagaatct gtagggcgta ttgaggcaaa atactctgta
     4501 gatgttgttg caagaataaa tggctggctt caaaaaagat attttcaaga aggtgctttt
     4561 gttaaaaagg gtcaaactct ctttttgata cagccaaacg agtatgctat agccgttcaa
     4621 caggccgaag ctgccgtaaa acaatcacag gctgctttga ttaattctca aaaagaactg
     4681 gtcagagcta aagagcttgt taaaaatgat tttgttagta agtcatacta cgataacgct
     4741 cttgctacaa gagaccagaa caaagctgcg cttgatgtaa ataaagcaaa ccttgcagct
     4801 gcacgtctta atttgagtta tacaaaaatc acttctcctg ttgatggaaa agtcggtaaa
     4861 atccttatca cagaaggaaa cctcgttaat gctcaatccg gcccgcttac aagaattgta
     4921 agcacaagcc ctatctatgc ctattttaca atcaaaagcg aagactactt aaagtatatg
     4981 aaaaatgcta ttgacccaaa atgttgtgaa ctgtcaggca tggatgtaaa aatcaggctg
     5041 tctgacggaa cagaatatac ggaaaaaggt gttttagagt ttgtaaacaa cgaagtagac
     5101 caaacagcag gcacaatttc tttgcgtgca actttccaaa acaaagacaa cctgcttgtt
     5161 cccggagact ttgtcaacgt tactgctatt gccaaaaaac ctgttaaagt gacacttgtg
     5221 cctcaaatag ctgtatcaga cagctcaaac ggcacatatg tatgggttgt agatgacaaa
     5281 aatattgcac agcaaaaata tataacaatc gataagcaag aaggcgaaaa ctggatagtt
     5341 ttagaggggc ttgaaccggg tgaaaaagtt atcaaagccg gattccaaag actcagacct
     5401 ggttcgcttg tatcttatga tgaaacaaaa caaattgcaa atactgaaga gaaagaaata
     5461 gatggacaaa aacaataatc aatcctcgca aaataatgca acggataaaa aaaatcttta
     5521 cttttttatc caaaaaccca gatttgctat ggtaatatcg attttcatta cgttggtcgg
     5581 tattattgca atgatggggt tgaagcttga aaaatatcca aacatcactc ctccgcagat
     5641 tatggttagc gcgtcatatc ccggtgccag tgcggacgtt gttgagtctt ctgttgcatc
     5701 tttgctcgag tctcaaatca acggtgttga agatatgctt tatatgattt cgacaagctc
     5761 ggatgaatca tatcagctcc aaatatattt caaggtcggt tctgacagaa acattgacct
     5821 tgtaaacgta caaaacagaa tcnntgcctg aagacgttaa aaggctgggc gtaacggcaa
     5881 aacaacaggt atcaggtgca ggtgttgcta ttttgaacct tgcttctaca gacggaagat
     5941 actctcaact tgatgtaaca aactatgcat ctatctttat taaagatgaa attgcccgtc
     6001 ttcccggcgt tggtgaagtt aacgtttacg gtgcaggcaa ctattcaatg agaatatggc
     6061 ttgatactga aaagatggca aacctcaatg tctctgtttt ggaggtacaa aacgcaatca
     6121 atacacaaaa cgttcaggta tctgcgggtg cacttggtca ggagcccggg cctgataagc
     6181 agcgtttcca aattacattg agaacaaaag gccgcctttt ggagccggaa gaatttgaaa
     6241 acataatcat tcgctcaaat caggatggtt caagcataaa aattaaagac gttgcgcgag
     6301 tggaattggg gtctgaaaca tactccagaa acggacgtgt ggatggaaaa cctgctgcac
     6361 ttttgcaaat tgtacagatt cccggtgcaa atgctattga gattgtaaac gaagtagaag
     6421 ccaaaatggc agaaatctcc aaaactatcc ctgatggtat ggagttggcc atggtgcacg
     6481 atgatacatt atttattcgt gaatctatga aggaagtaat taaaacaatt atagaaactt
     6541 caatcatcgt agttgcaatt atctttatct tccttggcga cccgagagca acactggttc
     6601 ctcttattgc aatccctgta tcattgattg gtacatttgc tgcattgccg gtttttgata
     6661 tgtcaatcaa cctgctaaca ctatttgcga tggttttggc tgtagcaacg gtagtcgatg
     6721 acgcgattgt tgtaattgaa aacgtaaaaa ggcaccttga agacggaaaa tctcctgttg
     6781 aggcaacaca gattaccatg caagaaatcg gcggagctct tgtttcaatg gcgctggtgc
     6841 ttatggctgt atttgtgccg gtaagcttta tgccggggtt atcaggtttg atgtataaac
     6901 agtttgctgt atgtatcgca atatctatcg cattgtcagc tgtttgtgct ttgaccctat
     6961 cacctgcctt gtgctcaatc atcttaagac acgaagatcc aaacagaaaa ccatcaaaca
     7021 aaatatcagc agctataaaa tgggtgttta tggaatttaa cgtttatttc caaaaactta
     7081 ccgatttgta tttgcactat gttaaaaagt ttgtatacaa caaaaaactc acactcattg
     7141 tctacggcgc aattattgct ttaatgcttg tgctgtttaa agtaatacct acaggcttta
     7201 ttcctgacga agaccaggct gtattgatgg cacaaatcaa cttgcctgcc ggtgcatcac
     7261 ttgccagaac aactgatgtc acagaaagaa tggatgaaat gcttcaaaat accgaaggtg
     7321 ttgaaggcag aatcgtgttt gtaggtatgg gaccctccaa ccaggccttt atggtaatca
     7381 ggctggatga atgggaaaaa cgtgagttta atatattcca aaaagctata aggaaaatgc
     7441 aaggaaaaga aactgacctg tctttaaatg caattcttgg cagaatcaga aaagatttta
     7501 gtacaattcg agatgcacaa atcggtgtat tctctcctcc tgctatttca ggtatgagta
     7561 tggtcggcgg ttttgaattc cagatgcttt ccaaaggcga gtatacccca caggaaatgg
     7621 aacagtatgc caacaagctc ataatggcgg caaaccagaa taaagacctt acaaacgttt
     7681 atacacagta tcaggcaaac atgcttcagt atattgtgga tatcgattat gctcaagcta
     7741 tggctcaggg cattgacctg acagagctct attctaccct atcatcaacg ctcggtactt
     7801 attatgtaaa cgactttaac aagcttggtc gtgtatttag ggtacagctt caggctgagc
     7861 aaaaattcag aagaagtgca aatgacctta caggcattta tgttaaaaac agtgccggta
     7921 aaatggtgcc aatcacaacg gttgtttctc taaaacagtc tgtaggtgcg ggttctatca
     7981 ccagatacaa ccagtataga aacgtacaat tctccggtca gccggcaact ggcagaagct
     8041 cgggtgaagc aatgaaagcc atggaatctg ttgcaaatgc agaacttccg aaagatatgg
     8101 gctttgaatg gtcaggtact tcaaaacaag agattgaatc aggcggacaa actggtacaa
     8161 ttattgcatt ggctttgata tttgtatatt tgttcctcgt tgctttgtac gaaagctggt
     8221 ctatacctct tgcggtattg cttatatgtc ctcttgcagc agcaggtgcg ttaatcttcc
     8281 agctgataat gggacaggca tttgaccttt attcacaggt aggtatgatt atgcttatcg
     8341 gtcttgcagc caaacaggct atccttattg tagaatttgc caaagtgctg catgaagagg
     8401 atggaatgac aatagaagag gctgctgtag aagcttcaag aatcaggttc cgtgcgatta
     8461 tgatgacggt agttgcgttt gtagtcggta tgttgccttt gattcttgct catggtgcgg
     8521 gggcatcttc cagaatatct gttggttcta cagtatttgg cggtatgctt gcagcaggta
     8581 ctctcggtac aattatgact cctgcatttt acgtaattat ccagcatctt gttgatattg
     8641 tgatgaataa aaaacaaaat gttgaaggcg aacagaaata acaccataat aataatgggg
     8701 aaaaaatgaa aaagacattt aaaacattaa ttatatctac gataatagca agctcactga
     8761 cttgctacag cggaaatgct tttgctgttg gattaaattt tttcaagaaa catgattcag
     8821 taaacaatga atctgtgaaa gaaactccta aggctgataa agcgaataaa ttgaataaat
     8881 cgaataaggc aactaaatcc accaaggcag ccaagcccaa aaaagccaaa aagcctaaaa
     8941 aggagaaata tgacgatacg gaagttaaag caaaaactga tatcaaccag ccttctgtaa
     9001 aaattattat caaagatgat aagaagaaaa aggctgaaaa agagcctaaa attaagcaaa
     9061 aacgttttaa aaagccaaaa gcttccaaag caaaaaatca aacaccagac ttgcaagaag
     9121 taaaactaaa acaggaacaa aatcctacac tgcaacaaga gggtgatgct ttcagtgcat
     9181 caacacagcc tgcaatggaa ggcgctgttt cggcaacacg tattgtttcc gtggatgatt
     9241 gcgtaaaaat tgcacttgaa aacaacccga ccatactttc tcaattaata agcaaagata
     9301 tttataaaaa caaaattgca caggcgtggt ccaattactt tccaaagctc aatgccggca
     9361 tatcatattc taaaaatgat atgcttatga caaacttcaa atttccaatg caggaataca
     9421 gcctttggaa tttacctaac gtcgggttta accaattgat ttatgacttt ggtaaaacag
     9481 gtgcacaagc tggtgttgca aaaaaaactt atgaagcgtc aagagagaca ttgcaatcaa
     9541 gcattaatga cgttgtttat caggtaaaaa atgcttactt taatcagctg tttttgcaac
     9601 aacaggccga agtttatgaa gattctgttt tgcaatatca aattcactta aagcaagcac
     9661 aggcatatta tgctattgga agcaaggcta aaatcgatgt ttctacagcc gcttataatc
     9721 ttgataatgc taagcttacc ctcatacagg ccaaaaatgc tatagaaaca ggatttgcta
     9781 ctttgacaaa tgcaatgggc gtgccggaat caaaaccttt tgacatacaa gacaggctcg
     9841 acagaaaaag atatgacatt acttttgatg aagcctttaa aatagcaagt gaccagagcc
     9901 ctgctcttgc tgctgccaaa aagaaaatgg aaggttccaa gctgcttgta aaatcttcta
     9961 aagttgcatt tttgcccgac attacaggat ttggcagcta caccaagggc ggtaagcttc
    10021 ccggtactga ttacggttat cagattgggg cacaggtttc ttattccaac ctcaaccttt
    10081 tattgttaaa acaacaggtg gatgaggcaa ctcttactta taaaaaagat caggctgatt
    10141 acgaaacaca acgccaaaaa acttatcttg aagtaaaaca agcctttatc cagctcaaaa
    10201 actctcaaca atccataccc gtagcaaaag cttctatgga tgttgcaaag gaaagatatg
    10261 accttgcagc cggacgatat aaggtaggtc ttggtgatgc tattgagctt aaagatgccc
    10321 agattgaata cgttaatgca agattgcagt attacaacac acttatgcaa taccacatct
    10381 ctgcggccaa tcttgaacgt gtaatcggtg cacctttgag tgcaagtgat gtaaatctgt
    10441 aaaaaaattg ccttttgata ttgattttgt caaaattaaa gaatgaatta tatctggttt
    10501 ttgataattt taatatctat aatgtcggct gctgttacag gcaaaataga tgcccttgtg
    10561 caatctgtta tgtcaggtgc gcaaaaatct attgaagttg caatctatct tgcaggcata
    10621 atggcttttt ggctgggaat tatgaaaatt gctgaaaaat caggacttgt cgctgcaata
    10681 gcaagattgt tgacccctgt tgctaaaaaa cttttccctg atattcccga tggaaatccg
    10741 gctgtaggtg atattgcaat gaattttact gccaatgcgt ttggtttgtc taatgctgcc
    10801 acaccaatcg gtattgaggc gatgaaaaaa ttacagcagt tgaataaaga taaaaattcc
    10861 gcatccaacg atatgtgcac acttcttgca atgaatactg ccggctggca gcttgttcca
    10921 acgacagtta ttgcagtgct tgctgcaagc ggctcaaaaa atccaaccga gattgtgttt
    10981 cctactctta ttgttacaac aattgcgttt ttgtctgcta ttgtaggggt taaactgctg
    11041 gagcgtattt ggccggctca aatacctgta aannaatgag acggaggaaa atgccgatgt
    11101 ttaagtcttt gatttattcg atttctgcat ggataattcc ttcaataatc ctcatcactc
    11161 ttgtttttgc agttgtgaaa aaaatacctg tttatgaaac atttattgac ggagcaaaag
    11221 acggacttaa ggttaccgtg gggattattc cttatctgat tgcaattata accgctgttt
    11281 caatgcttcg tgcttccggc gctatagatt tggctgcccg tgcgttttca ggttgtctgg
    11341 attactttaa aatacctgtt gatgttgtgc ctattatgtt tattcgttca ctatcaggta
    11401 gtgcggtgct tggtttgttt tccgaaatag caggcaactt tggtccggat gcttatgcaa
    11461 caaagctggc cgcaatcatg gttggcagtt cagagaccac gttttatgtt ctctctgtat
    11521 attttggtgc ggtaggtgta aaaaaattcc ggcactctct ttgtgcgggt gtttttgctg
    11581 atataatagg aataatagcg gcagttcttg tggcaagatg gctgtttttg tagttaaagg
    11641 atatgtatat gttaaaaaaa acgatattgt gtttgatgat gttgtcggtt tttgttttga
    11701 cgggttgttc aaggcataat gaaacttctg aagataatga tactcttact caaataaaaa
    11761 aacgcggcga gcttattgtt ggtgttaaat atgattcaaa accttttggc tttataaaag
    11821 acggaaagct tcaaggctat gacattgaca tagcgcacct tatggccaaa cgtattcttg
    11881 gtaatgaaaa acttattaaa tttgtagagg tggatgcgca aaatagaatt tcaaaactaa
    11941 attccggcga agtggatatg gtcattgcaa caatgtccat aaaccctaaa cgagctgaag
    12001 ttgttgattt ttctctgcct tattattacg ccggccaggc tattatgatt agaaaaggca
    12061 ctgctattaa aactgttggt gatttaaacg gcagacgagt gataattgtt ctgggcacta
    12121 caggtgaaaa aaatatcaga ttccttgctc cggaagtgat tttgcaagga tataaaactt
    12181 atcaggacgg ttttaatgct tttcttgata gaaaagcaga ggcaatgacc tctgatgaca
    12241 gcatactagc gggttttgtt atggatcatc ctgaatttat gattctgcct caaagatatt
    12301 cgcaagacgg ctacgggatt gcgtttagaa aagagcccca aagccgtgct ttaaaatccg
    12361 aggtaaatat tgctattggc gagttgagaa gaaaaggtta tttaaatttt ttgaaatcta
    12421 aatggcttcc ttctgcaagc ggtaatttta aagaaaaata atacctaaat catcttccaa
    12481 aaaatataaa caagataaat cacataaaat acaccgcagg tgattaaaat atgtgcacta
    12541 aaggctttat ctctgtatag atttataaat aacaatattg ttgaacagta aacaaggatt
    12601 atgtttatta cagattctgc accaaaaacc catggtgtga gcaatatgcc aatggctgtg
    12661 ggaatacagc tttgaaacac cattgctcct gtgatattac ccagagcaag cgtgtctttg
    12721 ttctggctca cccacaatac actgttgaat ttttcaggca gctctgttgc aatcggtgcc
    12781 agtataaggc ttaagacaag cggatttata tggaataagt cagcaaaaaa ccttatttgg
    12841 ccaacaaaca tatgtgcaaa gaatatcaat gcacctattg atacagcgac ttgaagccat
    12901 acaagaaatg tattatattt tttgaatatt ctttcaaata acagctcatc tacctctgca
    12961 acctctccac aggcactgtg tgaacagttc agggttctga atacgtatac aagatagtat
    13021 cccacaagag ctgctgcaca aatgtatttg ataaacggaa tatgtataaa acctgctgca
    13081 attgcaagcg tatagctaaa gaagaagaat tttaaatcgc gaaacataac aacatagtta
    13141 gcattcatct tgtgttcacg tttaccaagg cttcttaata taacaacagc cagccctgtt
    13201 acaaacattg caagcgttgc aagaagaaac ggtgcgccaa gaattgcacc aatgccgatt
    13261 tctttgccca cgtgcacatc tgtatgggca agatatgccc cgagtattgc cacgagcgga
    13321 acaatagttt ctggtaatgc tgtgcctact gcagccagta tgctaccaac tgcaccttcg
    13381 ttaagattgt atatcttgcc aaggtgttct actgcatttg taaacactac gcagcagcca
    13441 actatcaaaa ataaatttaa aattgttaaa attccgtgta aaattgcgtc catttttgtt
    13501 ctttcttagt taatcatcag tttttatatt ataatacatt tatggatttt aactcattta
    13561 aagatactat tacacaggca cagagtattg ttattctctc acacgtcaat cccgacggag
    13621 nncactttag gaacaatgtg tgctttgtat aatgctatca aaacaaattt tgcaaaagaa
    13681 gctgatatgg tttatgccgg cataatccct gagatttatc actttttgcc ggatattgat
    13741 aaagcaaaac ccgcaaagga tttggccggt aaaaaatacg accttgcaat tgccgtggat
    13801 gttgctgcaa aagatagaat gactgacgga ttaggcattt ttgacagtgc aaaaaaaaga
    13861 attaatatag accaccacaa aacaaataac aactatggtg atattaattt tgtccgtggt
    13921 gatgcttctt gcgcgggcga agttttgctg gacatttgtg aggctctggc tttaaaaatt
    13981 gacaaaaaaa ctgcctgggg catctataca gctcttttaa cagatacagg cggttttaga
    14041 tatgaaaata cacaggctgt gacattggaa aaggctgcaa gggttatcca atacggtgca
    14101 gatcctgctt tgatttcacg ttattgttac gaatcaaaac ctaaaaacat ggttatgctg
    14161 catgcaaatt gtatggttaa tgcaaaattc tatgacgaca ataaaatcgc ttgtgtttgc
    14221 attacaaatg cggatatggc aaaatttcag gccaaaaacg attatacaga aggtattgtg
    14281 gaagatttgc gccggattga cacaacagag gtgtcttttg tattaaaaga agtagatgac
    14341 aataccacaa aagccagcct gcgaagcaaa tccacagatg taagtgaaat tgcacaggta
    14401 tttggcggcg gcggccacaa gtttgctgcc ggctgtacaa taagaaagcc tatcaatatt
    14461 gcctgtgaca aaatgctgga tgaaatcaga aaagttttat gaatattatt atcgaaaaaa
    14521 cagttaatta tcttaaaaat cttataaatc gcattattat tgacgatttt atgggaatgg
    14581 ctgccgagat gggattctgg tttgcgatag ggatttttcc ctttatgctt tttatgatgt
    14641 cttttttcag cattatgggt aaaaaatcgt tgtttactcc tattatcgct tttcttgatt
    14701 ccgttgctcc tacagactct gttaatctca tcaaagaagt tttaaacgag gttttgatat
    14761 ttgaacacgg cggtatagtt gcagtatttg gattttttat tacggtattt ttgtcttcca
    14821 atgcaatctt ttgtatcata aaaggcctta acagagcact cggcattgac gaacacagaa
    14881 accttatttc tacaagaata ctctcaattt tgatggtgtt tgttaacgtg tttgttatgt
    14941 ttattacaat taaccttata atttttggca aagtgcttat tcagtttgct ttgaatttta
    15001 ttaatatccc gcttggcgca attaatattt tcttggtaag cagatggttt gtttcattta
    15061 ttgctcttta tatcatggcg tatttaaatt acttcctgct tcctgcgtgg caagggtcgg
    15121 ataaaataaa aagtaaaagc tcacttcccg gtacattatt cttttgtttt tgctggatgt
    15181 tcggttcgtg gtgtttttct ttgtatatca acaacttgca tacttacaac cgtgtttacg
    15241 gttcaattgg tgcatttgta atgcttatgg tctggttgta ttacacatct ttaatactgc
    15301 ttgttggcgg cgaggtcaac tcacaggcat atagacgttt gaattctaaa taactgtcat
    15361 aaaactttac atacagtttg tttttataaa gtttttttta ataacagccg atataatagt
    15421 caggcaaaaa acagggcagt tattaaatgg gtttggaaga cggtaaattt acattaggct
    15481 atataaatgc taaattgaac gctttattct ttgaaaaaaa agattctgca acaagcgttg
    15541 aatctgcctt tgataatcgg gaatggtatg aaaagtcaaa atatgatgac tacagcctcg
    15601 ggttgtctat tgaacgttgt gctcaatctg ctgaagttca acctttcaaa agcagtatga
    15661 gtaaaacttc tgccaaaaca acccccgctg cttctgagaa aaatgatcct gctatacaac
    15721 aggaaaagaa agatgctgca gtcagtagta taaaaaatag tgttggccgt gctattggct
    15781 cggtttataa aaaaacgtcc caacagggtg ctgttagtga tgtatacaat gacttcaaag
    15841 aattaagctc ttctgaactg gctcaaagtg ctgtattaag aaatctatac gcagaagctg
    15901 ccagcacaga gcttttagaa cgggcaaaag acggaaacct cacagtaaaa gaatactatg
    15961 aagcaaaatt gcagcttgct atgagtttgc tgcctacaga cggtttgagt gatgaggaaa
    16021 aaaatctttt aaagcagcac cttgcctctt atacaaaaga acagctggct atttttatag
    16081 acaaaataaa atactgtgat tcaaaagagt atgactcact tgccgataca gttaaaaaaa
    16141 tggtggctca ggcaaaggct ggaaaaagcg cagaaaatgc aggccctatg tctgttgcag
    16201 ctcttatgga agattctgta agcaatgaac caatgacatt tgagcaggta tactttattg
    16261 aaagaggagt tgcttatgac agtgacaata tagatgatta caataaaaaa gctgtgatgt
    16321 atgcgcaatg cgccaatgta gtggcacgtc aacaaaatgt ccatactcat cttgatgagg
    16381 ccttacaaaa tctcaaactc gcttctcaag gtgcagaaaa cccgcaggta ctcgatcgtt
    16441 tacaaaaaaa tctggaagtt ggcatattag cttctttaaa ggagctttat ggtaatgatg
    16501 aacaagcaat tcaaaatgca cttaaacaaa tcacaggtga tgataaaatc acttataaag
    16561 acggaaaact tgtttcttca ctgcctcaag caatcaattc atacagcttg agaatgattg
    16621 cagaaaaact aatcaaacaa actgatgaaa atgcagccaa aattcttaac ggaaaatcca
    16681 ttgaagacta cgaaaggaaa atggctgaca gttacaaact ggcctatgga gagaaaaatg
    16741 cacgacagct tgcacaagca tttgaagatg accaggaaca aggcgtgcag catatcaaaa
    16801 caggggttgc aatagcaagc ggagctgttg ctgcgggttc tatgttgcta tttccttatt
    16861 gtactcctat ggtaggcaag gctgtcattg caacaggctc tttggtcggg attgcgggag
    16921 cttcttctgt tgatattgtc gaaaatacaa caaaatacgg cggtattaca gaagaagaaa
    16981 aacgagaaat tgcaaaagaa atctcacaaa atgctctgct gtttgttgct tcaatgggcg
    17041 ccggcaatat aggtaatgga gcaaaagctg cacttcttgc aaaaaattgt ccgaagctaa
    17101 tggctgttgg tgctgatata ggcattgatt ctacaataag tcttttaagc gacctggcta
    17161 tcacaggaca aattgatctt tccgcagaag gggtttctca attgatttca cagcttacag
    17221 gtgtacttgc ctctaaagct gccgcaaaac gtactaaagc aaacactgct gaaatatcaa
    17281 cttctcaaaa aaacgaaaac aactatcata atcaaacaag aacgacaaat aataccagtg
    17341 atattaaaga gtttttgcaa tctccaaaaa tcaaagatga aatgcgtgct gatgtctata
    17401 aacttgtaaa agaacacccc gaaacaatag acgctcttcg taaaatgtat gatgcccctg
    17461 cagtaatgtc tgatgatttt tacatgacaa tgcatgaact gttggcaaaa tatccggata
    17521 aagcacaaca aattgttgac gatatgtact gtgtatctaa ttttaaaaat aaaaaatacg
    17581 gctctgaatt tcttggcggt gacgaggcag aattgattaa ataccttgcg caacaatctg
    17641 aacagggccg tgataatgca tatttgcttt tgtcttcaaa cgacaggttt aagattagca
    17701 aagccgccaa cgtcaatcct ttcaggcaac ttgatgaatt gaaaaaacaa taccctcaat
    17761 atgaggaaga tatcaataat ctggctttaa ataccggccg ctcttattct aaaattgaat
    17821 caattatcaa aaatctatca cccgaaaatg ctgatgagat tctccatata gcctccaaaa
    17881 actctaacct caatattgaa cataatacaa attcttttaa aatactcgct gacctcaaaa
    17941 aacaatatcc tcaactttca gactctattg tggaacttgc ctgcaataag aatatggata
    18001 taattggtct gcaaaaattg atcgctctta tggatgctca tccggaattt aagacggata
    18061 tcatgcgtct aagcagtgaa aaaatgttcg attatgacaa tatattcaaa actctgcaag
    18121 attttcaagc tcacagcgaa tttcgagata tcatgtttaa tcctaaaaaa actgatgtta
    18181 actatatttc taaagaagct ccctcccctg aattaaaaaa taaaagggaa gctatactca
    18241 aaaatattgc aaaagaggtt gatggaacac agcttaagcg cctaaaatca gcactgggag
    18301 acaaaattta taacattgag tgggaaaaac ttataccccc aaatgcatca aagtctgaaa
    18361 tacaaaaaat attctctgat atttatgaac gtacaaagtt ttttgcaaga ttaaaaaacc
    18421 ttgaagatgc acacggcaaa aatggaagat gggcttctga aatgaacgat atttcagata
    18481 aagctgcaat aaggattaaa agcggtgaaa gctttgaaga tgtaatatcc aacattgcaa
    18541 atgatgtgcg caatgatgtt aaatctcata aacgtattaa cgaatcaggc gcaaataatg
    18601 ccaacaatga agcaggtgta ccaagaaaca cctacgacgt ctgtgatttg gaatatcaaa
    18661 ccccttatga tgattactat tatggcgagt ataaaaaata ttttgacaaa ataaggtcta
    18721 aaaaaccgcc aagacaatcg ccttatcctg atatgactgt tacaaatgtt ataccggaac
    18781 ttggtttgat ggttcacccc aaggcctcac aatcatatga tgcaggcatg cggcatatca
    18841 atgacaggta tcaggagttg actccgttca tagaaaaagt caattccggc cagccgttaa
    18901 gcaaagctga cttaaagcag gcaaaagcta aaatagcgga aatacactac cttcttgcca
    18961 atataatgcc ttacaggcgc ggttctgcgg gtattgccga tgcaatgacc agggctcttt
    19021 gcaaaagtct ggggattgac ttgcctcctc taagaaaagg cgttgctctt gatttggaag
    19081 cttttcattt gaatctggat gaatacattg ataaatggga ttctttcttt gactattaaa
    19141 atctgctaaa atatacgaaa ggtaatatat ggaaataaat aaaatttata ccccaataac
    19201 cgaagatacc cgcagcacaa aaataatttc gcagggtgaa tttaacacag gtaaaaatat
    19261 gaacaaaaat accgacaagc tcatcagcct tatgacagca atgtacgaaa tgccaaaaac
    19321 agaaattacc tctcttttgg ataaatacgg aacaaaaatc cacagctcaa atgaacctga
    19381 aagagatttt tattctgttg aaaacggatt tgtaaaagaa atgaacggat ttgccgcaaa
    19441 atctcaggca gaggttttga gggcactaaa aaaaacagat ataaaaattg nnnnaatgtt
    19501 gaaacagcac cggatacata ttattctttt gtaaaaacag attttcaaaa acttgtaccg
    19561 tatcaaccca acaaaaggtt tgtaacagac aaagccaaaa gagactttat gaaagatatt
    19621 gtcaaacttg gaaaaatgaa tattgccaat gactctgtct ttaaaaaccc gaatagttta
    19681 tttgttacgc ctgacggagc gcatatagtt gcagcagatt ggtcgcggac tggttattta
    19741 tatcctcaac aggctgcaga gtattttgat aacataaaac aaatattgta atcgttatct
    19801 tgnngccagc ggatttctcc gattacctca aaatcatagt cagggcagcg tctcaggtcg
    19861 atttcaaagc ttctgtattt tggattatca gaaacaatta caactgtgtc cggcgggatt
    19921 ttttgcagcc ttttggcata taactgcccg tcaattctta cacaatatat tttcccatcg
    19981 tatatttctt ttcttgcatg gtcaacaagc agactgtcac cgccttcaat agtgggcatc
    20041 atgctgtctc cctgtgcaaa aatcatttcg gtctggctag tgctgacccc aaggtctttt
    20101 gcaagctgtc tgctgattga atatatggcg gtttgcactt cgttgtaaac agtcacacca
    20161 taacccatgc tggccgagac ttctccaagt acagggatgg aaatacaatc ttctgtattt
    20221 tggattttcg gtaatgtgtt tgcacttgca aggtttacat caaaatgttt gtcaagtctt
    20281 tctagctgct cacaggaaag ctctttgtct tttatttgat ttgcgtattg tcttgttacg
    20341 tcaagcgcaa ttgcaatatc tgtgtaactt acttttctgc gcagtttacc tgttaattct
    20401 tcaatagctt cgtataattt catatttact cccgttttgt atttcttatt ataaaataat
    20461 acttgacaaa tgtaaagtag taaattatta taatatcagt tagacgaaaa gacactttcg
    20521 aaaataccaa aaaagattat tttagtcaaa aaaaagcctg acccccgaga tcaggcaaga
    20581 tatatacttc atgactaaga taacataaag tatttttaaa agcaagaaaa cagcacagag
    20641 cgtctatttt ggggaattaa acttcggaga tatactttga taattgcgaa aaatatctac
    20701 aatacaaaaa cacttcttgg catgctggat ttggcgattg atacattgat agaaaatgat
    20761 gcttgctcct gctgcaaaat ctttccttac aaagatgagc gctgcagcca aattgatttg
    20821 tgcaaaaatt ttatcttcga aggtttgcta aacatatata ggcgcagaaa aaaagataaa
    20881 aaaactaatt ttccatatta actcccgttt tatggaactc atcaaccatg actgcgggcg
    20941 ctttaactag ccttttgcgc ctgctttttt ttgttatcag gagatagggg aataaagatg
    21001 cacgaaaaat tttttaacaa gttaaatgac gagcaaaaag acatagttaa acttgtcaaa
    21061 caagggctga caaatataga aataggtgtg gaattgggtt acagcgctga cagcataaaa
    21121 aaacgtttga gtgtaattta caaaaaattt ggggtgagaa agagaataga attgattgac
    21181 ctgatttcgt gatatcatac ggatatgata gatactgtaa tttttgacct ggacggcaca
    21241 cttttgtata cgcttgaaaa cctgcatttg agcacaaatt atgctcttga taaatacggg
    21301 tttaaacagc gtacgcttaa agaaataagg tcatttgtcg gtaacggggt agaattgctt
    21361 ataaaaagag ctgttcctga tgatacggat gaaataacta ccgcaaagtg cctggctgat
    21421 tttaaagagc attatgcggc tacaatgtat gataaaacac ggccgtatga cggcattgta
    21481 gaaatgattg ataaattaaa tgcagacaat attaaatgtg ctgttgtctc aaacaaattt
    21541 gatgctgcgg taaaagagct ttgcgaaaga tattttggca aacgtatttt atatgcagtc
    21601 ggagaaagag acggtatccg caaaaagcct gcacctgata gtgttttgga agttatcaga
    21661 cagataggcg gaaaaaattg tgtttatgtt ggcgactcag aagttgatat acaaactgcc
    21721 caaaatgccg gtataccctg catcagcgtt agctgggggt ataaggatac agattatttg
    21781 caaatgcaag gtgctgaatt aatagccggt gatgttgcgt ctttgctcaa ttgtttgtat
    21841 aaaatttaat ctttaggttt tggcggttga taccattgca aaacatccgg ataaatgcag
    21901 ttgtcctcgc attctccttt ttttccggca aaaaatattt gttccagctc ggatttttgt
    21961 ttgttttgta gagcaaaaaa atactggtct nngccttatt agtacggcaa tttcccgttc
    22021 atcttcactt gtgggtgaag aaatactttc cagtatgtcc aatcgctctt ttattcttct
    22081 tctggctgct ttaatggcat ccattatttc atctgcattt tttagcactt gagaatcctc
    22141 atcgtgtacc agttttaatt caaaatcttt tgtaattctt gaaaatgatg agcccataaa
    22201 tctacacacc tttataatac tacttcttta taaataaaaa cacctgttat atacggattt
    22261 cataatttat atatattatt acaaaagtta aaagaaatct ccaaaaaccg cctgttttaa
    22321 cttgattaat aaatatactt gtgttttcat agaattaaga taagagccag ccnnccagcc
    22381 cttttgacct aaatcctctt gaaaaaatgt ctttacggct gaaagacagt caaatcgggc
    22441 agatgcttgt ataagcattt ttattaaaca agaaattaaa actacagaag aattaaacca
    22501 gatggttaaa atcagactta aaagactcgg atataaaaag aacccgacat acagaattgt
    22561 tgttatcaac gatttacaaa aaagagaagg taagcctatt tgcgaattag gccactaca
//
LOCUS       DABS01000129            5245 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_14391, whole genome shotgun sequence.
ACCESSION   DABS01000129 DABS01000000
VERSION     DABS01000129.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5245)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5245)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5245
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..1035
                     /locus_tag="CPT85_05525"
     CDS             <1..1035
                     /locus_tag="CPT85_05525"
                     /inference="COORDINATES: protein motif:HMM:PF11335.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23085.1"
                     /translation="RPYKHNVIIPSNSYKGLRCTENGYNFVMQNINDFKKQSLKLFTD
                     KIIYELQPFEEQRIEAYKKYKKALVIFLLFLVFIIIFLICMFIVKVPKEYESFFSIFL
                     AATEAVALYYLGQIFLISKDFERNLKKQIMTLVFKNVPNFKWQEKSDISNYMIEKFRL
                     FDFDLQSRNDDDCFKGKYKDIDIDICETALRITFRGILICLSLKDKNYKGLTLIKQDN
                     LFTTIDKPLKSYIKNNDLKLVKLEDVEFDKIFNVSSSDQIEARYILTTSFMERLKNLK
                     TVFKADKVEASFCSNYVLIALHTWKDLFKLGNVTKPVYNFNQYKTMIDEFASIFELID
                     ELKFTDNIGL"
     gene            complement(1040..1441)
                     /locus_tag="CPT85_05530"
     CDS             complement(1040..1441)
                     /locus_tag="CPT85_05530"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23086.1"
                     /translation="MPQEARRNLQLAVLMHDITKKEGEIDKTHPVCSAKDAGFILNKF
                     DMPKERKDDICLLIRNHDWLERYNKGITSTEEFAKTLKNGNDFLMLCILGEADLKAVQ
                     RDGMFYEKYKDVLQKGAIEINEIIHSLVTAA"
     gene            complement(1444..1944)
                     /locus_tag="CPT85_05535"
                     /pseudo
     CDS             complement(1444..1944)
                     /locus_tag="CPT85_05535"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1462..1499
                     /estimated_length=38
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1970..2197)
                     /locus_tag="CPT85_05540"
     CDS             complement(1970..2197)
                     /locus_tag="CPT85_05540"
                     /inference="COORDINATES: protein motif:HMM:PF09992.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23087.1"
                     /translation="MFTSLLQXHIYHKLTLPELYKVCEDLCLEKAMNFDGGGSTSLNY
                     KGTDNPDYKDFEIISDKHASARKLKSFLVIY"
     gene            complement(2112..2813)
                     /locus_tag="CPT85_05545"
     CDS             complement(2112..2813)
                     /locus_tag="CPT85_05545"
                     /inference="COORDINATES: protein motif:HMM:PF09992.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23088.1"
                     /translation="MKKLISMMFLICAAVIFTSGACPVVCRGTKNIEITNNKGLYIIR
                     IPKERNSCIKPYVTKLLTFNKDVYKQTGAELVINAGYFDPNNHGTSSYVVIDGKTVLD
                     PTTNASLMNNKALEPHIDTILNRTEFRVLNCKGETRYDIAAHNARAPFRCEIVHSVQA
                     GPMIYPDLKLSREYFVSKDENGKVTRDSITALKKCARTAIGIKDGDIYIIIAXXYLSQ
                     THAARVVQSLRGFVS"
     assembly_gap    2174..2175
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2829..3356)
                     /locus_tag="CPT85_05550"
     CDS             complement(2829..3356)
                     /locus_tag="CPT85_05550"
                     /inference="COORDINATES: protein motif:HMM:PF03739.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23089.1"
                     /translation="MQSDYAVYTKDSWVIHNVKKYELTKDGVFKKITNIPSIQVLKGD
                     KANTAFKIMSYSTKKDXXNNSEITEYIRMLKSENLKDEYRFMLNKYLQRYFHSAICVL
                     FAVLGSLLGFSRPREQKLVNFVIGIGIVFGYYITLPFFDMCAEKGILSPYLTSSIQPI
                     AILIAIFIFKKIKDV"
     assembly_gap    3173..3174
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3346..3933)
                     /locus_tag="CPT85_05555"
     CDS             complement(3346..3933)
                     /locus_tag="CPT85_05555"
                     /inference="COORDINATES: protein motif:HMM:PF03739.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23090.1"
                     /translation="MQLPKISLPTKIFDGYITKQVFAATLVCIFLFVVIWIAPETLLK
                     VIKRTLSGMYTPMVGIQLLIYEIPKIVGKALPVGLLLGTLFTFDKLSKDSELTVLRGI
                     GLTFWRIVYPIIVLSIFISVLCFSLYNTLIPYSEKKINQLKGETFDTHFVYTVKAAHD
                     QLEKIIVVPRYYSDMISHPXXSIHRHKCTKQHYAV"
     assembly_gap    3392..3397
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3933..4658)
                     /gene="lptB"
                     /locus_tag="CPT85_05560"
     CDS             complement(3933..4658)
                     /gene="lptB"
                     /locus_tag="CPT85_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013633400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="DAB23091.1"
                     /translation="MKIIAKNLVKIYGDRTVVNDISFEVNKGEVVGLLGPNGAGKTTT
                     FYMVVGLVKANGGAVYLDDKELTNVPMNIRAKEGIGYLPQEASIFRKLSVEDNIKLVL
                     QMNDKLNEEEKKQKLEDLLNEFGMEKKRKFSAISLSGGERRRVELARALAASPEFILL
                     DEPFTGIDPIAIGEIKDNIRKLSEEKGLGVLITDHNPKATLSITDRAYVIFDGKIKIQ
                     GKSVEVANDPVAKQFYLGKDFTL"
     gene            complement(4732..>5245)
                     /locus_tag="CPT85_05565"
     CDS             complement(4732..>5245)
                     /locus_tag="CPT85_05565"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23092.1"
                     /translation="LFKNICSKLDKNPEFLAKISASAKNPELAIDRCSIDMFKNEKAI
                     SAVHQLGQMKPSERADVKNEKAVKLLKTLKDNLVANHKDNEAILKKVMEEEKDGKFFR
                     QFFIAKGGMEMSSIVGSVVGLTLLAPELSHLVLHPIMKGLNMEAPKAKDVNLKDKEVN
                     AQTQKLDKKA"
BASE COUNT         1608 a          929 c          854 g         1806 t
ORIGIN      
        1 agaccgtata aacataacgt tattatacca tctaattcat ataaaggttt acgctgcact
       61 gaaaatgggt ataattttgt tatgcaaaat attaatgatt ttaaaaaaca aagtcttaag
      121 ctttttaccg acaaaatcat atatgaatta caaccctttg aagaacaaag gatagaagct
      181 tataaaaaat ataaaaaggc tttagttata tttttacttt ttcttgtctt tattattata
      241 tttttaattt gcatgtttat tgttaaagta ccaaaagaat atgagtcctt tttttctata
      301 ttcttggcgg caacagaagc tgttgcttta tattatttgg ggcagatttt tttgatttca
      361 aaagactttg aaagaaatct aaaaaaacaa ataatgacgt tggtctttaa aaatgtccct
      421 aattttaaat ggcaggaaaa aagtgatata tcaaattata tgattgaaaa attcagactt
      481 tttgattttg atttacaaag tagaaatgat gatgattgct ttaaaggtaa atataaagat
      541 atagatatcg atatttgtga aactgcattg agaattactt ttagagggat tcttatttgt
      601 ctgtcattaa aagataaaaa ttataaaggg ttaactttaa ttaaacagga taatctattt
      661 actacgattg ataaaccttt aaaaagctat attaaaaata atgatttaaa gcttgtaaaa
      721 cttgaagatg tggaatttga taaaattttt aatgtcagct cttctgatca gatagaagca
      781 agatatatat taacaacttc ttttatggaa agattgaaaa atcttaaaac tgtttttaaa
      841 gcagataagg tagaagcatc cttttgctct aattatgtat tgatagcact acacacctgg
      901 aaagatttgt ttaaactcgg taatgttaca aaacctgtct acaactttaa ccagtacaaa
      961 acaatgatag acgagtttgc gtcaattttt gaattgatag atgaattaaa atttactgac
     1021 aatataggcc tgtaaaaagt tatgcagctg ttacaagact gtgaattatc tcgttaattt
     1081 cgattgcacc tttttgtaat acatctttgt atttttcata aaacattccg tctctttgca
     1141 ctgcttttaa atcagcttct cccagaatgc aaagcattaa aaaatcattg ccgtttttaa
     1201 gtgttttagc aaattcctcg gtgcttgtaa tacctttgtt ataacgctcc agccaatcat
     1261 ggtttcttat cagaagacaa atatcatctt ttctctcttt tggcatatca aatttgttga
     1321 gtatgaaccc ggcgtccttg gccgaacaaa ccggatgagt cttgtcaatt tcaccttctt
     1381 tttttgtaat atcatgcatc aaaacagcca gctggaggtt tcttctggct tcttgcggca
     1441 attttagata atcactatga gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnt
     1501 gtgcgtgtgg tgctgtactt ttcctataag ggttaaaaat tccggcagtg cttttattat
     1561 tgcattcatc tgttttgtca aaacaggaca gcccggtatg gttacttcgt tttcttcaac
     1621 aaactctttt acatatctga aaacccttcc agagctggaa aaattctctt caataagatt
     1681 tgaaacagaa ggatatcctc ttaacgttgt atacaatggc ccctgctcaa tagcaaagcc
     1741 aaaaagccct gttatatctg ttttttgagc atggtcgtgt ttttgcaaaa gtctgttgat
     1801 gtcttcaata aaatctcttc tggagtactt gagctcaaga gaaaaatcgc aagacgaaat
     1861 atcagtgcac aaaaactcac tgccctgttt ttccatttcg tctaatgctt taaaaaattt
     1921 ttcagttatt tcgtttgaaa tcatagctat atattagcat aagaattttt taataaataa
     1981 caaggaaaga ttttaatttt cttgcacttg catgtttgtc agaaattatc tcaaagtctt
     2041 tgtaatcggg gttgtctgtg cctttgtaat ttaatgaagt agacccgccg ccgtcaaaat
     2101 tcatagcttt ttcaagacac aaatcctcgc aaactttgta caactctggc agcgtgagtt
     2161 tgtgataaat atgnncttgc aataatgatg taaatatctc cgtcttttat gccaatagct
     2221 gttcttgcac attttttcaa ggccgtaata gagtcccgtg taacttttcc gttttcgtct
     2281 ttggaaacaa aatattctct tgaaagcttt aagtcaggat aaatcatcgg ccctgcctgt
     2341 acagagtgca ctatttcaca cctgaacggt gctctggcat tgtgtgcagc tatatcgtat
     2401 cttgtttcac ctttgcagtt taaaactctg aattctgttc tatttaaaat tgtatcaata
     2461 tgcggctcaa gtgccttgtt gttcataaga cttgcgtttg ttgtcgggtc tagtacagtt
     2521 tttccatcaa ttacaacata agaggatgtc ccgtgattgt tggggtcaaa atatcctgca
     2581 ttaataacaa gctcggcgcc ggtttgttta tatacatctt tgttaaacgt caaaagcttt
     2641 gttacataag gttttataca ggagtttctt tctttgggga ttcttattat ataaagccct
     2701 ttgttgttgg taatttcaat attttttgtc cctctgcata caacaggaca ggctcccgaa
     2761 gtgaatataa ctgcagcaca aatcaaaaac atcatggata tcaatttttt catctcaaac
     2821 tccaaagatt atacgtcttt tatcttttta aatataaata tagctatcaa tattgcaatc
     2881 ggctggattg acgaagtaag ataggggctt agtatacctt tttccgcaca catatcaaaa
     2941 aacggcagtg ttatgtaata accaaaaaca ataccaatac ctataacaaa gttaacaagc
     3001 ttctgctctc tgggtcggga aaaaccgagc aatgacccca gcacagcaaa caaaacacaa
     3061 attgctgaat ggaaatatct ttgcagatac ttgtttagca taaacctgta ttcgtctttc
     3121 aggttttcag attttagcat tcttatatat tctgtaattt cagaattatt ccnnctgtct
     3181 ttttttgttg aataagacat tatcttgaaa gcagtattgg ccttgtcacc ttttagaacc
     3241 tgtatggagg gaatattagt tattttttta aatactccgt ctttggtcaa ttcatatttt
     3301 tttacgttgt gaataaccca gctgtctttt gtataaacag cataatcaga ctgcataatg
     3361 ctgcttagta cacttgtgtc tgtgtattga gnnnnnngga tggctaatca tatcgctgta
     3421 atatcttggt acaacaataa ttttttcgag ctgatcatgt gcagctttta cagtgtaaac
     3481 aaaatgcgtg tcaaaggttt cgccttttaa ttgattaatc tttttttcgc tgtatggaat
     3541 aagcgtgttg tataaagaaa aacataaaac agaaataaaa atactcaaaa caatgatagg
     3601 ataaactata cgccagaatg taagcccgat tcctcttaat acagtaagct cagaatcttt
     3661 gctcaatttg tcaaacgtaa aaagtgtacc cagcaaaagg cctactggca gtgctttacc
     3721 cacaattttg gggatttcgt aaatcaaaag ctggatgcca accatcggag tgtacatacc
     3781 ggacaatgtt ctttttatta cttttaaaag agtttccgga gcaatccata taacaacaaa
     3841 caggaatata caaacaagcg ttgcagcaaa tacctgcttt gtaatataac cgtcaaaaat
     3901 ctttgttggt aatgaaatct taggcagctg cattacagag taaagtcctt tccgagataa
     3961 aactgcttgg caacagggtc gttagcgacc tcaacacttt tgccctggat ttttatcttg
     4021 ccgtcaaata taacataagc tctgtcagtg atagaaagag ttgctttggg gttgtggtcg
     4081 gtaatcaaaa cacccagccc tttttcttcg gaaagctttc ttatgttgtc tttgatttcg
     4141 ccaatggcaa tagggtcaat acccgtaaac ggttcatcca gcagaataaa ttccggactt
     4201 gccgcaagcg cacgtgcaag ctctaccctt cttctttctc cacccgaaag agaaatagcc
     4261 gagaattttc tctttttctc cataccaaat tcgtttaaca aatcttctaa tttttgcttt
     4321 ttctcttctt cattgagctt gtcattcatt tgcaaaacaa gttttatgtt gtcttcaaca
     4381 gacagctttc taaaaataga ggcttcctgc ggaagatagc cgataccttc ttttgcacgg
     4441 atattcatag gcacatttgt gagctcttta tcatcgagat aaactgcacc gccattggct
     4501 ttgacaagac ctacaaccat gtaaaatgtt gtggttttac cggccccatt cgggcctaaa
     4561 agaccaacaa cttcaccttt gttaacttca aagcttatgt cgttaacaac tgttctgtct
     4621 ccgtatattt taacaagatt ttttgcgatg attttcatat ttttactacc tttattatta
     4681 ataaaggata gcacaaaagg catgaaaaat taaattattt tcttggacaa atcaggcttt
     4741 tttatcaagc ttttgagtct gggcatttac ctctttgtct tttaaattaa catctttagc
     4801 cttgggggct tccatattca gccccttcat aatcggatgt aatactaaat ggctcaactc
     4861 gggagcaaga agcgttaaac cgacaacaga acccacaata gaactcattt ccatgccgcc
     4921 tttggcaata aagaactgtc tgaaaaactt accgtctttt tcttcttcca taactttctt
     4981 taaaatagct tcgttatcct tgtgatttgc aacaaggtta tctttaagag tttttaaaag
     5041 tttaacggct ttttcatttt taacatcagc tctttcagaa ggtttcatct gaccaagctg
     5101 atgaactgca ctaatggctt tttcattttt aaacatatca atggaacatc tgtcaatagc
     5161 cagttcagga ttttttgcag aggctgaaat ttttgctaaa aattcaggat ttttgtctaa
     5221 tttgctgcaa atatttttaa atagt
//
LOCUS       DABS01000130           12143 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_5236, whole genome shotgun sequence.
ACCESSION   DABS01000130 DABS01000000
VERSION     DABS01000130.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 12143)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 12143)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12143
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(29..616)
                     /locus_tag="CPT85_05570"
     CDS             complement(29..616)
                     /locus_tag="CPT85_05570"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23027.1"
                     /translation="MINNMRPISFGTKFGNDVKEKLLLAQSNGLLKEEHLTVLEDLSN
                     DGSDSFLKLKEDNWCVNHLYVDSPIIEKAKDIVETAANNTPVDDKHYRKTLKSLKNEL
                     ENEKKNMALFDEGIVVDEITGTNWMRRYHSTKFDMAAFLKCFTKKTNLSKLITKKENA
                     VNKKMTEHKSDIARLNAEYYKNKSSFEERLHKLFD"
     gene            complement(691..1800)
                     /gene="aroB"
                     /locus_tag="CPT85_05575"
     CDS             complement(691..1800)
                     /gene="aroB"
                     /locus_tag="CPT85_05575"
                     /inference="COORDINATES: protein motif:HMM:TIGR01357"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="DAB23028.1"
                     /translation="MTQLINLKVDIPEKNAYSYDILIGENLLAQADKLVKKYSKANKF
                     LIVTNETVAGLYRDSLKIDNAFWLVLKDGEEYKNFDNLKLILDAAVEHRLERKDCIIA
                     FGGGVIGDMAGFAAASYMRGCDFIQIPTTLLSQVDSSVGGKVAINHEHGKNLIGAFYQ
                     PKLVLADISTLKTLDLRQLKTGLAEVLKYAFIEKSCDTSSISNSNYRLFDFLQQNKTD
                     IFALKSDTMSRLVEICCTLKACVVNQDETEKGLRAILNFGHTYAHAIENLTNYTVYTH
                     GEAVAMGMKMAFNLSLKRGFVDNNYYNQAIELIESYDIAPKGAVFDKEKFYDEMFLDK
                     KAQDGKVRFVLPNGHYSVVIVSDSSKEQVLESLGL"
     gene            complement(1784..2299)
                     /locus_tag="CPT85_05580"
     CDS             complement(1784..2299)
                     /locus_tag="CPT85_05580"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: protein motif:HMM:PF01202.20"
                     /note="catalyzes the formation of shikimate 3-phosphate
                     from shikimate in aromatic amino acid biosynthesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="DAB23029.1"
                     /translation="MDNKKNIVLIGMMGAGKSTIGHLLDEKLHDFLYLDIDKEIEKLA
                     QKHIPEIFARYGESHFRQLEHNMIEKYSNYHNQVISTGGGVVENPENIKLLKKNGVVF
                     YLKASADEXGKAHQGSRPMLNHPNPKQRLKELIERREPFYKLADFEINTENKDLLQIT
                     DEILKNYDSID"
     assembly_gap    1968..1969
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2292..3386)
                     /locus_tag="CPT85_05585"
     CDS             complement(2292..3386)
                     /locus_tag="CPT85_05585"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011025915.1"
                     /note="catalyzes the formation of chorismate from
                     5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino
                     acid biosynthesis; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="DAB23030.1"
                     /translation="MNKFRFLTSGESHGICLNAIIEGMPSNITIDKDFIDEQLARRQQ
                     GYGRGGRMQIETDKVKILSGVRFGKTTGAPVCLEIQNKDWQNWTVPMSVEPVNMSDPD
                     IAEAVEAKKITRVRPGHADLSGAIKYNQDDVRNVLERSSARETASRVAVGAVAKCLLK
                     EFGITGSSKVLQIGNAFEEESMKKEIDNAKEKGDTLGGSFEVRFTNLPVGLGSFVNWD
                     RRLEGRLAQALMSIPAVKAVEVGAGVKAASLSGSNMHDEIFYNPETGCYYRETNNAGG
                     IEGGMTNGEDVVLKVTMKAIPTMKQPLQSVDIKTKEPYTAHFERSDTCAVEACAVVGE
                     AMAAIVLADAFLEKFGGDSLEEIKRNFNRG"
     gene            complement(3463..4935)
                     /locus_tag="CPT85_05590"
     CDS             complement(3463..4935)
                     /locus_tag="CPT85_05590"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23031.1"
                     /translation="MYNSIYPVQIKPYVLPQNKKVGNKEEEQESSQSSDLNKGRRASG
                     SESAGSYGATDPNGKSKFERQEFPNGQKTTIDYSKSKVNIAQILTDFKNTAIAIGSPP
                     NIIQEVESYLNIAESESLKNEPNKKRIQSNLKNASNILDEFISKTLNKNSKVVENWID
                     ALFLQQVNYKSDPTTVNEDFLVKLPDKETGDMKPISQNLSQQTQKTEEPSAQPAQPAP
                     VNEQPQQPEQTAPSNPNIYIPQDGEVKKAFIQGKKYSAINQTDKALAAFQSALERSQV
                     LGDTNAQGMICFEMGQIYDKNDNLEQALNFYNQAHQSTTDNNLKARAYYSMAQIYDDV
                     VYFEPAMNHYFAAISFAGEADNLNAQTRALSDIGDMYAERYDIQNTYTYYGAAKNIAL
                     ETNNTKTMGATWSRSGDALTMVNENVNALQDYKASAKFYEQSESPVKTARNYEKASVV
                     MLKLGNRTKAKSLLEKAQKIALSASDNDYAQKIQKQLNVI"
     gene            complement(5279..5989)
                     /locus_tag="CPT85_05595"
     CDS             complement(5279..5989)
                     /locus_tag="CPT85_05595"
                     /inference="COORDINATES: protein motif:HMM:PF02683.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23032.1"
                     /translation="MDNLIQFFQTNVKGEFSLLILALCFLGGVVSSLSPCGIGMLPVV
                     VSYIGASPEQKVSKSAMQIISFIFGLAVSLTAIGVVAAITGQVFGAGNRAYFILLLSA
                     LIMIFGLNLIGVIEINFPVLVKKFPQSNKANAFFYPMLLGMVFAFATTPCSTPILAGI
                     MAAASLSSNIAYAALMLFLFSIGQGMIILVAGLFTSALKNISSFARYSEILTKISGVI
                     LVLFSLFLYYKVFSEFIV"
     gene            complement(5982..6386)
                     /locus_tag="CPT85_05600"
     CDS             complement(5982..6386)
                     /locus_tag="CPT85_05600"
                     /inference="COORDINATES: protein motif:HMM:PF00085.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="DAB23033.1"
                     /translation="MKNWIIALAILIIPMVTYYVLDKTHSDKAAFEANAQSTYSKPVV
                     IKFASPMCLDCKKLEGVMNEVMPAYADKVTYQKINAQSNDENTQALIKKYTVTLVPTM
                     VFLKKDGALYKRTEGYMPKSELEKILKGLING"
     gene            6548..6636
                     /locus_tag="CPT85_05605"
     tRNA            6548..6636
                     /locus_tag="CPT85_05605"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:6582..6584,aa:Ser,seq:gct)
     gene            complement(7155..7994)
                     /locus_tag="CPT85_05610"
     CDS             complement(7155..7994)
                     /locus_tag="CPT85_05610"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23034.1"
                     /translation="MPNGKTNPLVKQDIEAILSGKNYYEQFSRLDTTEILTKTKFGDV
                     FSVGDKMFVRDVNGYIPLKMDKLTYELLFPPVDRYAMAQGASQNCGAIAVINNMVQVP
                     SNRVKMLQLYEQKGNKVTVHSLGDTTCKMTFDLKDLKSLDDGILSDTSYGLKMLERKG
                     QLAGGKSGYCPPNYVERTQKFFVPDINKTPIDYMSDTPLYLSKQQLERELATIGNGRT
                     FVTGGGGNYSLGTGDSHWCSVYDYRNGNIRFANPNATADYKDVPISTFIDDYLGVGVF
                     HNH"
     gene            complement(8059..8454)
                     /locus_tag="CPT85_05615"
     CDS             complement(8059..8454)
                     /locus_tag="CPT85_05615"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23035.1"
                     /translation="MGNIIINALTKAERLARYKAMPNVGSATEVVTNLVNGTDDVAKQ
                     AQRLARKAKYNSQFQSTPNIDLFVKESTPTVQVDRAKSFTIPSHVATPNIAQVKLDPK
                     EIAFFSENLKGAEHADIEQVVSEILALKK"
     gene            complement(8586..9875)
                     /locus_tag="CPT85_05620"
     CDS             complement(8586..9875)
                     /locus_tag="CPT85_05620"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB23036.1"
                     /translation="MTLTGIISAIGNNNSVYPLIVRDCGIEVPSKIALTYNQNKKESK
                     EIAKLAARERFLDEYAVSAVWLGGIPLVGKVADYFIKKQGYNPDVNLKLFNKNSVQNI
                     DDNIKNFSTKVSKEIIDELKAVKNNKPAYEKLLAVKFAASTTIPILFMGVILPKLIFA
                     SSARKIEQQRQKEAQKNKDSFKSSNVNFQKSIDFMNRKNTSFKGSWVSAAANFSTVDK
                     MAVTDGGYALGRVGTARNKNEAIDVGFKMAGMMFLNFVAPKYIEKYLDKFIAKTSGLE
                     VALDPLMLNDEEFIESIKNKTLKLPKSLNEKEILEFIDKNPDSIFVKYARKFGKVKFL
                     ENNIRDPRAFVDIKDIVKFKENIESFMNKAAVSKSIEKYAKKAKAVKSVNILTNIGLS
                     SFLLAYALPKAQFAFRKLVTGSDLEPGLAPAKKTITG"
     assembly_gap    10162..10192
                     /estimated_length=31
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(10193..12121)
                     /gene="feoB"
                     /locus_tag="CPT85_05625"
                     /pseudo
     CDS             complement(10193..12121)
                     /gene="feoB"
                     /locus_tag="CPT85_05625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015260841.1"
                     /note="too many ambiguous residues; incomplete; missing
                     stop; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
     assembly_gap    10566..10584
                     /estimated_length=19
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    11604..11714
                     /estimated_length=111
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    11885..11963
                     /estimated_length=79
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         3459 a         2362 c         2090 g         3990 t
ORIGIN      
        1 tttattaaat tttcatgact aaataatact aatcaaacaa tttatgcagt ctttcttcaa
       61 aactgctttt atttttgtaa tattcggcat ttagccttgc tatatcggat ttatgctctg
      121 tcattttttt attcacagca ttttcttttt tagttattaa ttttgaaaga tttgtttttt
      181 ttgtaaaaca tttcaaaaat gctgccatat caaactttgt agaatgatat ctgcgcatcc
      241 aatttgtgcc ggtaatttca tctacgacaa taccttcatc aaacaatgcc atgtttttct
      301 tttcgttttc aagttcgttt ttcaatgact tgagcgtttt tctgtaatgc ttgtcgtcaa
      361 ctggagtgtt attagccgct gtttcaacaa tatcttttgc tttttcaata atcggactat
      421 caacgtaaag atggtttaca caccaattat cctctttcag cttcaaaaac gaatctgaac
      481 cgtcattact caagtcttcc aacactgtta gatgttcttc ttttaataaa ccatttgatt
      541 gtgccagcag caatttttct ttaacgtcat ttccaaattt tgtaccaaat gaaattggac
      601 gcatgttatt tatcattaat acaatatcct ttcttaacaa aaggtttaag tagccaatat
      661 aaaaaatttt gttagtttat tacaactctg ttacaatcca agactttcaa gcacctgctc
      721 tttagacgaa tccgatacta ttaccacgct gtagtgtccg tttggcagga caaaacggac
      781 tttgccatct tgtgcttttt tatccaaaaa catctcgtca taaaattttt ctttgtcaaa
      841 aacagcacct tttggcgcga tatcataact ttcaattaat tcaatcgctt gattgtaata
      901 gttattgtcg acaaatccgc gttttaaaga tagattaaac gccattttca tccccatggc
      961 aacagcctcg ccatgcgtgt aaacagtgta gttggtcaaa ttttcaatag cgtgtgcata
     1021 agtgtggcca aagtttaaaa ttgcacgaag ccccttttca gtttcatctt gattaacaac
     1081 acaggctttc agcgtgcagc agatttcaac cagccgcgac atagtatcgc tcttgagtgc
     1141 aaaaatatct gttttattct gctgtaaaaa atcaaaaagc ctgtaattag aatttgaaat
     1201 tgaagaggtg tcgcacgatt tttcaataaa agcatacttt aaaacttccg caagccctgt
     1261 tttaagctgt cttaaatcaa gcgttttcag agttgaaata tcggccagca caagctttgg
     1321 ctggtaaaaa gcaccgataa gattttttcc gtgttcatgg ttaatcgcaa cctttccacc
     1381 gacagaagag tccacctgcg aaagaagagt tgtgggtatc tggataaaat cacagcctct
     1441 catgtagctt gccgctgcaa aacctgccat atcgcctatc acaccgccgc caaaggcaat
     1501 tatacagtct tttctctcaa gtctgtgctc tacggctgca tcgagaataa gtttgagatt
     1561 atcaaaattt ttgtattctt ccccatcttt taaaacaagc cagaaagcat tatctatttt
     1621 taaagaatcc ctgtaaagtc cagctacggt ttcgtttgtt acaatcaaaa acttatttgc
     1681 ttttgaatat tttttaacaa gtttatcagc ctgcgcaaga aggttttcac ctatcaggat
     1741 atcatagctg tatgcatttt tctctggtat atcaactttt agattaatca attgagtcat
     1801 agttttttaa aatctcatct gtaatttgta aaaggtcttt gttttcggta tttatttcaa
     1861 aatctgctaa tttataaaag ggctcccgtc tttctatcag ctcttttagt ctttgtttag
     1921 ggtttgggtg gttcagcatc gggcggctgc cttgatgagc tttgccgnnc tcatcagccg
     1981 aggcttttaa gtagaaaaca accccatttt tctttaacag cttgatattc tcaggattct
     2041 ccacaacacc gccgccggtt gagatcacct gattgtggta gtttgagtat ttttcaatca
     2101 tgttatgctc aagctgtctg aaatgtgatt cgccataacg tgcaaagatt tcggggatgt
     2161 gcttttgcgc aagtttttct atctctttat cgatatcaag atacaaaaaa tcatgcagtt
     2221 tttcatccaa aagatgccct atcgtgcttt ttcccgcacc catcatgcct attaatacta
     2281 tatttttttt gttatccacg gttaaaattt ctctttattt cttcaaggct gtcgccgccg
     2341 aatttttcta aaaatgcgtc tgcaagcact attgcagcca tggcctcgcc gactactgcg
     2401 cacgcttcca cagcgcaggt atctgagcgt tcaaaatgag cggtataagg ctcttttgtt
     2461 tttatatcaa ctgattgcag cggttgtttc attgtgggga ttgctttcat tgttactttc
     2521 agaaccacat cttccccgtt tgtcatcccg ccttcaatac cgcctgcgtt gttggtttct
     2581 ctgtaatagc agcctgtttc agggttgtaa aaaatctcgt catgcatatt cgaaccgctt
     2641 aaagacgcag cctttacacc cgctccgact tcaacggctt ttactgcagg aatactcatc
     2701 aaagcctgtg ccaatcttcc ttcaaggcgt ctatcccagt ttacaaaaga ccctaatccc
     2761 acaggcaggt ttgtaaacct gacctcaaag ctgccgccaa gtgtgtcgcc tttttctttt
     2821 gcattgtcaa tttctttttt cattgattct tcttcaaagg cattgcctat ttgcagcact
     2881 tttgaagatc ctgtgattcc aaactctttt aaaagacatt ttgcaacagc acccactgcc
     2941 acacgagagg ctgtttctct tgcgcttgag cgctcaagga cgtttctcac atcgtcttga
     3001 ttgtatttta ttgcacccga aaggtctgcg tggccagggc ggacacgtgt aattttttta
     3061 gcctcaacag cttctgctat atcggggtca gacatattaa caggctccac agacattggc
     3121 actgtccagt tttgccagtc tttattttga atttccagac agacaggtgc gcctgttgtt
     3181 ttgccaaaac gtactccgga taagattttc actttgtcag tttctatctg catgcggccg
     3241 cctctgccgt atccctgctg acggcgggca agttgctcat cgataaagtc tttgtctatt
     3301 gttatatttg aaggcatgcc ttctattatt gcgttcaggc atattccgtg ggattcgccc
     3361 gaggttaaaa atctaaattt attcatttat ttgcggcttt caattgtctg ataatccaat
     3421 tataaggcaa ttataagtta attcaggcct tatcgcaatg tgttaaataa cattcaactg
     3481 tttttggatt ttttgggcat aatcattatc agaagcacta agggcaatct tttgggcttt
     3541 ttcaaggagt gattttgctt ttgttctgtt gccgagtttc agcatgacaa cagaagcttt
     3601 ctcatagttt cttgctgttt ttacgggaga ctctgactgt tcatagaatt tggccgaagc
     3661 tttgtaatcc tgcagcgcgt taacgttttc gttaaccatg gtcaaagcat ctcccgagcg
     3721 tgaccatgtg gcacccatgg tcttagtatt attggtttca agggcaatat ttttggcagc
     3781 gccatagtag gtgtatgtgt tttgaatatc gtatctttcc gcatacatat ccccaatatc
     3841 agaaagagca cgggtctggg cattaagatt atctgcttca cccgcaaaag aaattgcggc
     3901 aaagtaatga ttcatcgcag gttcaaaata tacaacatcg tcataaatct gtgccatgga
     3961 gtaatatgct cttgccttaa gattgttgtc tgttgtggat tgatgagcct gattgtagaa
     4021 attaagggcc tgttcaaggt tgtcattttt atcataaatc tgccccatct caaaacaaat
     4081 catgccctgc gcatttgtat cgcccagcac ttgtgagcgc tcaagagcag attgaaaagc
     4141 cgcaagtgct ttatccgttt gatttatggc agagtatttt ttaccctgaa taaacgcttt
     4201 ttttacttcg ccatcctgcg gaatataaat attcggattt gagggtgcag tttgttctgg
     4261 ctgctgcggc tgctcattaa ctggggcagg ttgcgcgggt tgtgcggatg gttcttctgt
     4321 cttttgagtc tgctgggaca ggttttgtga aataggcttc atgtcgcctg tttctttatc
     4381 aggcagtttg acaagaaaat cctcattgac tgttgtgggg tctgatttgt agtttacctg
     4441 ctgcaaaaac agggcatcta tccagttttc aacaaccttt gagtttttat taagggtttt
     4501 tgaaataaat tcatcaagga tatttgaggc attttttaaa ttagactgta ttcttttttt
     4561 attgggctcg ttttttaaag attccgattc cgcaatatta agatagcttt ccacctcctg
     4621 gataatattt ggcggagagc ctatggcaat ggctgtgttt ttaaaatccg ttaaaatctg
     4681 ggcaatgttt actttagact ttgaataatc gattgtggtt ttttgaccgt ttggaaactc
     4741 ctgacgttca aatttgcttt taccgttagg gtctgttgca ccgtaagaac cggcagactc
     4801 tgagccggag gctcttctgc ctttattaag gtcggacgac tgagaggatt cttgctcctc
     4861 ttctttattt ccaacctttt tgttctgcgg cagaacatat ggttttattt gtaccggata
     4921 aatactgtta tacaaatttt aacacccttg atttgataaa tttgccctac tatcgttatc
     4981 ggaacaaaag ggttttagta cagtttttta tacagaaatc atacatttgg cctaaattag
     5041 caacatgcct gacaaccctg attttccttt cactattcat gcataatgat ttttttaaag
     5101 aagtcatgag ctaatcgctt aaatgtatga acaacttaaa aattattcat aacaatgtat
     5161 gattttatac aacaaaagta tgtgtagaat aacactatac tccttaaata aaagacgacg
     5221 atacgcatat ccctaatcta atagctatga accaaaaaga ttcatagctt ttttttgctt
     5281 atacaataaa ctcgctaaac accttgtaat aaaggaataa agagaacaat acaagaataa
     5341 cgccgcttat tttggtgaga atttcagaat atctcgcaaa cgaagaaatg ttctttaaag
     5401 ctgatgtaaa taaccctgca acgagtataa tcatgccctg tccaatggag aacaaaaaga
     5461 gcattaatgc tgcataagca atgtttgagc tcaaagaagc agctgccatg atacccgcaa
     5521 ggataggagt tgaacacgga gttgttgcaa aagcaaacac cataccaagc agcatggggt
     5581 agaaaaaggc attggctttg ttgctttgag ggaatttttt tacaagaaca ggaaaattaa
     5641 tttcaattac gccaataagg ttcagcccga atatcataat caacgctgat aacagaagta
     5701 taaaataggc tctgttaccc gcaccaaaaa cctgacctgt gatagctgca acaacgccta
     5761 tggctgtaag actcacagca agaccaaaaa taaacgagat aatctgcatt gcagactttg
     5821 ataccttttg ctcgggcgaa gcgccaatgt agcttacaac tacaggcagc atgcctattc
     5881 cgcagggaga cagtgatgac actacccccc ctaagaaaca taaagcaaga atcagtaaag
     5941 aaaattcgcc tttaacgtta gtttgaaaaa actgtatcaa attatccatt gattaatcct
     6001 ttaagaattt tttctagttc gctttttggc atgtagcctt ccgttctttt atacaaagcg
     6061 ccgtcttttt tcaaaaatac cattgtagga acaagtgtta ctgtatattt tttaatcaaa
     6121 gcctgtgtgt tttcatcatt ggattgggca ttgatttttt ggtatgtaac tttatccgca
     6181 taagcaggca ttacctcatt catcacgcct tcaagttttt tacagtccaa acacataggt
     6241 gaagcgaact ttatcacaac aggttttgaa tatgtgcttt gagcattagc ctcaaaagca
     6301 gccttgtcgc tgtgagtttt gtctaaaaca tagtatgtca ccatcgggat gattaaaata
     6361 gcaagtgcaa taatccagtt tttcataatt atctcctgtt ttttatgctg ttttttctaa
     6421 atataacata caataagttt tgaggattca tattagtcac aagaatgaga aactggggta
     6481 aaatagaaaa tatttgtaaa aatctgtttt ttttgataat atagcattac ttgaaaattg
     6541 aacaaatgga gaagtgggtg agtggctgaa accggcaccc tgctaaggtg ttatgtgggg
     6601 taacctgcat cgagggttcg aatccctcct tctccgattt taagtccacc ctgattgttg
     6661 aggtggactt tttaatgcgt actgtaaagt aacatataaa atgaaaataa acgacttggt
     6721 cggaaatata agcaacaaag ttcggaaagg caaattttgc atgttagaaa atttacgtaa
     6781 cttaaaaatg cggaactttt gtggctcaaa ttcaataaaa ctgttttaaa tcaaaataac
     6841 taaaattcaa taataacagg tatttatggc aaaaaaagaa tgattaacat caagtttgag
     6901 aaattttagt aaaatcatac aatttttttt aatctgcaaa accaattaat cggaacttgc
     6961 agaactaaga ttgtattgaa attcaactat ctataaatct tcatattgtc ttcttctcaa
     7021 gtttaggtta tgttatttca aattaattgt tagtttacag tcggaagatt tttgaatagt
     7081 cgcaaatggt ttgtgtattc taagctccaa atggttaaaa ctatcttttg atggtcaaag
     7141 ataaacaaaa aaacttaatg attatggaaa acaccaacac ctaagtaatc atcaataaag
     7201 gttgatattg gtacatcttt ataatcagca gttgcatttg gattggcaaa tcttatatta
     7261 ccatttctat aatcataaac agagcaccaa tgagaatctc ctgtacctaa agaataattg
     7321 ccacccccac ctgtaacaaa tgtacgtcca ttacctattg ttgcaagttc tctttccagt
     7381 tgttgtttac tgagatataa aggcgtatcg ctcatataat caattggtgt tttattaata
     7441 tctggaacaa aaaacttttg agttcgttct acatagtttg gtggacagta accacttttt
     7501 ccaccagcaa gctgtccttt acgctctagc atttttaaac cataagatgt atcggagaga
     7561 attccgtcat ctaaagattt aaggtccttt aaatcaaaag tcattttgca agtggtgtcg
     7621 cctaatgaat gaactgttac tttatttccc ttttgctcat ataattgtaa catttttact
     7681 cgattggaag gtacttgcac catgttattg ataacagcta ttgcaccaca attttgcgaa
     7741 gccccctgtg ccattgcata tctatcaact ggtggaaata ataactcata tgttaattta
     7801 tccattttga gtggtatgta cccattaaca tctcggacaa acattttgtc tcctacggaa
     7861 aatacatctc caaatttagt tttagttagt atttctgtag tatctaacct agaaaattgc
     7921 tcataatagt ttttaccact taaaattgct tctatatctt gtttaactaa aggattagtt
     7981 ttaccattag gcataacaaa acgagggaag tatttaattt ttccttcctt atttaatttt
     8041 actatagtga gtatctcttc atttttttaa agctaatatt tcactaacaa cttgttcaat
     8101 atctgcgtgt tcggctcctt ttaggttttc actaaagaaa gcaatttctt taggatctag
     8161 tttaacttgg gcgatatttg gtgttgctac atggctagga atggtaaaag attttgctct
     8221 gtcaacttgc accgtaggtg tagattcctt aacaaaaaga tctatattgg gagtagattg
     8281 aaactggcta ttgtacttgg cttttcttgc taatcgttga gcctgtttag caacatcatc
     8341 ggttccatta actaaatttg taacaacttc tgtagcagat cctacattag gcattgcttt
     8401 gtatcgagca agtctttccg ctttagttaa tgcgtttatt atgatattcc ccatgctgta
     8461 taattcctaa tttcccatat atattatata aagtcattat taaattaaaa attgccaaaa
     8521 tttgtacatt gtaaagttta tttatcccaa aataatcaaa ctaagtgttc agttacatat
     8581 aaactttatc cagtaattgt ctttttcgca ggagcaaggc ccggctccag gtcagagccg
     8641 gtaaccagtt tacggaacgc aaactgagcc tttggcagtg cataagcaag caaaaagctg
     8701 ctcaagccta tatttgtcag gatatttacg ctttttacgg cttttgcttt tttagcatat
     8761 ttttcaatgc tttttgagac agcagcttta ttcataaagc tttcaatgtt ttctttaaac
     8821 ttcactatat ccttgatatc aacaaacgca cgcgggtcgc gaatattgtt ttctaaaaat
     8881 tttactttac caaactttct tgcgtattta acaaaaatac tgtcgggatt tttatctata
     8941 aattcaagaa tttctttttc gtttaaactt tttggcagct tgagcgtttt gtttttaatg
     9001 ctttctataa attcttcgtc attaagcatc aaagggtcaa gcgcaacttc aagaccggag
     9061 gttttagcta taaatttatc aagatatttt tcaatatact ttggcgcaac aaagtttaaa
     9121 aacatcatgc ctgccatttt aaaaccaaca tcaattgcct catttttgtt tcttgcagtg
     9181 ccaacacggc cgagagcata ccctccgtca gtcaccgcca ttttgtccac ggtagaaaaa
     9241 ttagctgcag cagaaaccca gctgccctta aacgaagtgt tttttctgtt cataaaatca
     9301 atagattttt gaaaattgac attagacgat ttaaaactgt ccttgttttt ttgagcttcc
     9361 ttttgtcttt gttgttctat ctttcttgca gaagaagcaa aaatgagctt tggcagaatt
     9421 acccccataa aaaggattgg tatagtcgtg gacgctgcaa attttacggc aagcagtttt
     9481 tcataagcag gcttgttatt ttttacagct tttagctcat caataatttc tttagacacc
     9541 ttggtgctga aatttttgat gttatcatca atattttgca cactgttttt gttaaacagc
     9601 ttaagattca catcagggtt gtagccctgt tttttgataa aataatccgc aactttaccc
     9661 acaagaggaa tcccgccgag ccacacggca gaaactgcgt attcgtcaag aaatctttct
     9721 ctggcagcaa gttttgctat ttctttagat tcttttttgt tctggttgta agtaagcgct
     9781 atctttgaag ggacctcaat cccgcaatct cttactatga gaggataaac actgttattg
     9841 tttcctatgg ccgatataat acctgttaat gtcatttttt ttctccaatt ccgattctgt
     9901 ataaaaaaac agcccctcaa ggctttatcc cgaaaggctg ttttatttta gaatcgttat
     9961 tacaataaat acacaactaa tccatcagcc ttgtcgggac tatatggata tgatgatgtt
    10021 gagtttttat tgttgtaaat gacatatgat tttccttttg ttataaagtt agcaaaaaga
    10081 tttgtttttt gcaacctcca tgttgatttt tattacaaca agctgcctgc catataaaca
    10141 atgaatgcaa caacccaggc annnnnnnnn nnnnnnnnnn nnnnnnnnnn nngcgctgta
    10201 cagtcgcaat tgcagccaca catggtgtat acaatagtga aaacacaaga aatacaaacg
    10261 cactaagctt tgtaaacaac acaggaagct tgttaacatc cccgccaagc aaaacagtaa
    10321 gcgtgctcac aacactctct tttgccataa aaccggtaat aaacgccgta gacacacgcc
    10381 aatcgttaat tccaagaggc ttaaacacag gcacaagaag gttacccagc atagccagca
    10441 gactgtcgga agaatctgca accagattca gccttgagtc aaaggactgc aaaaaccata
    10501 taataattgt tgcagcaaaa attattgtaa aagcccttgt tacaaagtct tttgctttca
    10561 tataannnnn nnnnnnnnnn nnnntgtaat taggcaactc cataacaaac ggtaccggct
    10621 gtcctttaaa aacaaaaaat ttcataaaat atgcaaatat tatgcccaca attatgccaa
    10681 taagataaag gctcaatatc acaatcacct gattttcttt aaaaaatgca gctgtaaaaa
    10741 gagcatatat aggcagcttt gcagaacaac tcataaacgg agtcaacagt atggtcattt
    10801 ttctatcgcg ttccgaaggc agagttcttg ttgccatgat tgccggcact gaacacccga
    10861 acccgatgag cataggcaca aagctccttc cggaaagtcc tattttacgc agcaatttgt
    10921 ccataataaa agccacacgt gccatgtatc cgctgtcttc aagtattgaa agaaagaaaa
    10981 acaaaaccac aatgacgggt aaaaagctta aaacactgcc cactcccgca aacacaccgt
    11041 caataatcaa tgaatgcaca acaggattga gcccgtaggc agtaagtgca ctgtctgtaa
    11101 gagttgtaaa aaagtctatt cctacatcca taatgtctga caaaaacgtc cccaaaggtc
    11161 cgaatgtaag ataaaatata acggccataa ttgcaaaaaa tgcgaacatt gcactgtatt
    11221 tgcctgttaa aatcttatcc gcagcaacgg taattttgtg cccgattgtt tccgagggcc
    11281 tgtgcacgca ttttgcacag agcttttcaa taaatgaaaa tctcatatcc gcaagtgcag
    11341 cttctttatc cagaccgcgg gattcttcca tctctgcaat tattcgagag caaatttccg
    11401 tttctttttc atcaagattt agagcctctt ttatcaggtt gtcgccttca gtcagttttg
    11461 ttgcagcaaa cctgacagga atccccgcgt tttttgcatg gtcttcaata agatgtatta
    11521 ttgaatgaat acacctgtgc acagcaccct cattggcatc atcaggactg caaaaatcta
    11581 gcctgccggg gtgttctttg tatnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
    11641 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
    11701 nnnnnnnnnn nnnnacttca tccatcatat tgagcgcaat aaccataggt acatccagct
    11761 caataagctg cattgtaagg taaagattcc gctcaatgtt tgttgcatct acgatgttga
    11821 taatgccgtc cggcttttca ttcagaataa agtttcttgt cacaatctcc tcactgctgt
    11881 aaggnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
    11941 nnnnnnnnnn nnnnnnnnnn nnncccacat gctggtttga gcctgtgagc tggttaaaaa
    12001 gagtggtctt tccgctgttt tggttgcctg ccagtgcaaa atttatattt ttctttaaag
    12061 gcgtttttaa atcttttctt gttttatatg gagttatttc gcctattttg gaatgttcta
    12121 tgtcctcaaa ttcttccttt ttg
//
LOCUS       DABS01000131           11751 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15943, whole genome shotgun sequence.
ACCESSION   DABS01000131 DABS01000000
VERSION     DABS01000131.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 11751)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 11751)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11751
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            62..1930
                     /locus_tag="CPT85_05630"
     CDS             62..1930
                     /locus_tag="CPT85_05630"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22945.1"
                     /translation="MKKIETKTQPIFGFSLAEALITLLVVCIITIASVPVITKKHRAQ
                     SSVPHGSYACYWNGDALVAKYTENKQVKDGKIVFDEEEGRYGCEFEPPKGAKNFVITV
                     IGGGGGGAGSAVGSIINKYEVNNTNAKTKYTEAGVYEFLLVGAGEYGGKINYVSEDKY
                     KPHLRALSSMSGDIVYIPPTMIPAGYNMLLSVGRPHENYGYDVTSNTSVKIYKDYQFD
                     YPILFAQARGGTDGGHVTYEFQNLQGKLWKNRLELRYSDKDAQNLLTCEKDPGVLEAL
                     DSKSIKEYKDTNSSKACPIDAVKNNSFTWGGETFSSVKNSVIHKSSAKKTGSLLSVDH
                     QNDKRYNIIEELSKYNDKFGIEFNKVIKGANNAYYLKANGERDFEKESQACSGSNWKT
                     KEYCIDYENNYGAGGGGQGIYKNVMYPERIAGKEGLILIKQNKLFAGLGGEQGNLSQT
                     TYQILTQKVVMFPGKGGKGGVYSPNVIKTNQNYTNNECTQGKSGESSYIKNSSEVLGG
                     KGASLIDPDKKNSYSEIVDEKTSMPIGGDGKTAVEPKEGLTGGLGGFSGTNDSYNGLT
                     AAVFKNGALLGTVSTITGAGSGGGGGSLTISKSGDDYDIEQGNGGDGASGLVFIQW"
     gene            complement(1932..2474)
                     /locus_tag="CPT85_05635"
     CDS             complement(1932..2474)
                     /locus_tag="CPT85_05635"
                     /inference="COORDINATES: protein motif:HMM:PF00857.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="DAB22946.1"
                     /translation="MTIDITAQNSAFLFIDVQEKLVGMLQKDKCAKKAEILARTAKVL
                     GIKTVLTEQYPKGLGSTIHSVKYSVPDSAKFFEKTSFNALLTDGVKEALGDVKNVFIF
                     GIETHICVYQTAMALLQAGYNVFAIKDACASRDSDEFKAGINLMEKEGVKILTVEMVI
                     FEMLKSSKHPNFKEVQAFIK"
     gene            complement(2490..3713)
                     /locus_tag="CPT85_05640"
     CDS             complement(2490..3713)
                     /locus_tag="CPT85_05640"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22947.1"
                     /translation="MENSILLITDNEKVSKLVKAKVLLLRNSDVFESVSSKDCLEKVK
                     EKNPVLIFYHLCADNEEEFLNFVQKIRQNDNTKTCSVILLFEEFDENTLCSAYEKGIT
                     DFLTLDATETEFTIRTLWCLKKRENLYESQNKKDILSQLKILDKNNQVYTENYTYTIL
                     KEESKKDWGTFVVAAPDINIRSKISPENLMNTIKKTVRSCDILGYASDFKIYLWFRHT
                     AKEDVLKVLEKIRTALTADFTICAGYIETKDIAFDRAEELANKALSKALLKGNSFLFA
                     QEPVKKEVNLEVNVKNFKLHKENFVKKLENILSPLFYQTQKRNEEKLFETKITQTVTE
                     ERGNFSLKNEKGESFFTVSYPGYTKINVEIIHNIKNQDLKAEKLFVDTNELSEEKLEY
                     LLNSFIKDFQTYTND"
     assembly_gap    3787..3788
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4055..4972
                     /locus_tag="CPT85_05645"
     CDS             4055..4972
                     /locus_tag="CPT85_05645"
                     /inference="COORDINATES: protein motif:HMM:PF00669.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin FliC"
                     /protein_id="DAB22948.1"
                     /translation="MAIIVNTNITALKTQKNLNSATNSLNSALERMSTGLRINKAGDD
                     AAGLYVATGLNTQIRGSKVAQDNVATGNNVLSTMEGDLDVILDNLNRIRDLAVQAANS
                     IYDESAMAAMKDEVQQRLDEIDRISLASNFNGLQLLAGEGTLAEQGLRLQVGANSDAA
                     ANCIQIDADFFADAMNSENLGSDYNGRMPVGSLIKPADGLSGNIDAAFTNASNAAAYI
                     DVLDAAIDNISTKKSTIGATMNRLDAALSSLTTVIENNTAAKSTIMDADIAEESAEYT
                     KAQILQQTSSALLVQANALPQIAINLVQG"
     assembly_gap    5132..5157
                     /estimated_length=26
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5197..6564
                     /gene="lysS"
                     /locus_tag="CPT85_05650"
     CDS             5197..6564
                     /gene="lysS"
                     /locus_tag="CPT85_05650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017322425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="DAB22956.1"
                     /translation="MLQEKYKDLPAGEETNDEYLVAGRVMAIRNTGMFIDLMDGSGKI
                     QIFSHKENMDAEKIKTLKLVDIGDIVGFQGTVRRTPRGELSIKATDFKLLSKSLLPLP
                     EKFHGLTDVETRYRQRYVDLIMNEDVRDTFRKRSLIIQKIREYLAKQGFLEVETPILQ
                     TTASGANARPFTTHHNALDMGLTLRIALELYLKRLIVGGVSERVYEIGRCFRNEGIDT
                     RHNPEFTMIELYQAYADYNDMMTLTENMVAYVAQEVLGTMKIKYGENEIDLTPPWDRK
                     TMLGSIKEATGVDFMEIYDAQEAIKVAKTLNVHVDDDMNWGQVVEAVFEDKIEPSLIQ
                     PCHIIDYPREISPLAKVHRDNDRLTERFETRINGWELANAFSELTDPIDQRSRFEAQA
                     LAKANGDEEAMELDEDFITSLEYGMPPTGGMGMGIDRLVMLLTDSQTIRDVIAFPTMR
                     PIDNK"
     gene            6613..8097
                     /locus_tag="CPT85_05655"
     CDS             6613..8097
                     /locus_tag="CPT85_05655"
                     /inference="COORDINATES: protein motif:HMM:PF01520.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22949.1"
                     /translation="MFFNIKFYKKVIILFCFTLLLNSLPAEALQVVYPKNLSTQVNAA
                     STFFIGSTEPGSSLKINEMDVKVYENGSFVQVVPLNDGENTIKVESTKDQTKDTITYI
                     IKKVPKPEPESVSAQLEEFSPDEYMYASVVKDNTPLRAQPDENAARVTHLNNGTVLMI
                     NGKKGGYYRVSLTPSKNVWVRAENIVNYSKITGKMLADASNVSLSEDKFYNYIKTDLS
                     FAVPYKVSETDTGLNLELYNIKNNAADTILFKTSGSVKTLAVNTVCADNTSSYFVELN
                     TKMWGYDVFYEGNTLVLKIRKAPVVDTSAPLKGIKIAIDAGHGGDDAGAIGPTGVKEK
                     DINLDIAKKLQKTLEDSGAQVVMIRPDDTNVPLYERPLKAKKENALILLSLHANALAD
                     GADPYAKHGTSVYYYNRESVELAKTIRDVLTKELGTKDDGVCKCSFVLTRPTMPLSVL
                     VEVAYMIHPDEYKLLLDDGFRQKAAEALKKSLETYVLNSVKNSQ"
     assembly_gap    8292..8293
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8312..8782
                     /locus_tag="CPT85_05660"
     CDS             8312..8782
                     /locus_tag="CPT85_05660"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22950.1"
                     /translation="MAAAAGAGTGLLLRHFVPVWKSEMDYVMFNQSDAIKEEAVKTVK
                     DSVLDKAKKQLAKQPKNEALDLFIKRAQAKDAKESIAIKEEIQKASKTVRKQVKILID
                     DIAVKMRAAKNLTDANIKNAVKQKRSISAFLLPGIALGALGAYVYNVIGTISEE"
     gene            complement(8800..10164)
                     /locus_tag="CPT85_05665"
     CDS             complement(8800..10164)
                     /locus_tag="CPT85_05665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003541633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="DAB22951.1"
                     /translation="MTSINADSILETIDMIRVHHLDIRTVTLALSLRDCCDTDVKAVG
                     EKVYNKITKYAKNLVSMAQEIEDEYSIPIINKRISVTPISLVGESCKDYDYVYLAKVL
                     DKAAQDVGVNFIGGFGALVEKGCTKGDIALIESIPEALANTERICSSVNVASSKAGIN
                     MDAVLKMGATIKKAAQLTADRDGIGAAKLVCFCNVPGDNPFMAGAFHGYGESECALNV
                     GVSGPGVVRAAIESLPQSTSFGEMANKIKQIAYKITSTGELVGRDMARKMGIPFGIID
                     LSLAPTPEVGDSVAGIFQAMGLEHAGAHGTTAALAMLNDAVKKGGIMASSHVGGLSGA
                     FIPVSEDAGMIEAAQRGCLTFDKLEAMTSVCSVGLDMIAIPGDTPEDTISGIIADEMA
                     IGMINKKTTAVRIIPAPNKTVGDKIVFGGLLGEAPIMSVNTLSSSKFVQRGGRIPAPI
                     HSLX"
     assembly_gap    8803..8804
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(10183..10470)
                     /locus_tag="CPT85_05670"
     CDS             complement(10183..10470)
                     /locus_tag="CPT85_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009531903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="DAB22952.1"
                     /translation="MENRSENKIIITVSGVDRIGIVAKVAAVLADYKVNIEDIKQSIM
                     QDYFVMFLLGDISQSEKSFKEIKEAMQKAGEELKMEIWIQKKQIFDKMHNI"
     gene            complement(10528..10809)
                     /locus_tag="CPT85_05675"
     CDS             complement(10528..10809)
                     /locus_tag="CPT85_05675"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22953.1"
                     /translation="MLTGHSIDRQEFLEKLLKEFFSKYQDVIERGFCSFEQEYLKRNN
                     FLGKTVFIQQTDNSQRQEYFAVKMDENGNLVVKNSDDEEKIIFSGDLSI"
     gene            complement(10812..11264)
                     /locus_tag="CPT85_05680"
     CDS             complement(10812..11264)
                     /locus_tag="CPT85_05680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="DAB22954.1"
                     /translation="MNNFDIIQFDSIDSTNTYGVKNFDKLKDKTAVSALVQTQGKGRF
                     NRVWICETTDNLCLSLVLKPEKIAHIANLTQYMSVCTCKVIETYGLKPQIKYPNDVLI
                     DGKKVCGILCESVLKKNIIQGVVLGIGVNLNMPLSLVEKIEKPXPPHL"
     assembly_gap    10828..10829
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(11257..11736)
                     /locus_tag="CPT85_05685"
     CDS             complement(11257..11736)
                     /locus_tag="CPT85_05685"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22955.1"
                     /translation="MILQGNAQIDAEIAREETFNNINYALGPNEFRDYWTDPNHEANY
                     NALKNNTTKIANRYLALFSDGTYGVRYSNDPYHNYYYDEFGSLFKVDVLNKPFDVYPH
                     RSVAYNRYGAFKNATFVVSKTEQYLYDKNQKLLGHWVENACYDEAGNVLMLRKNSNE"
BASE COUNT         3620 a         2231 c         2340 g         3526 t
ORIGIN      
        1 atgaaatcgg tgcttaaatt ttctatcata agaatatcaa gtattgattt taggaaaaaa
       61 tatgaaaaag attgaaacaa aaacacaacc tatttttggt ttttcacttg cagaagctct
      121 tataaccctt ttagtagttt gtattataac cattgcgtct gtgccagtta ttacgaaaaa
      181 acacagagcg cagtcaagtg ttcctcacgg gtcttatgct tgttattgga atggtgatgc
      241 gctcgttgca aaatatacgg aaaacaaaca ggtcaaagac ggaaaaattg tttttgatga
      301 ggaagaaggc agatacggct gcgaatttga acctccgaaa ggtgcaaaaa attttgtaat
      361 aacagtaata ggcggaggag gaggcggtgc agggtcagcc gtgggctcta ttataaacaa
      421 atacgaggta aacaatacaa atgcaaaaac taaatataca gaagccggtg tttatgaatt
      481 tttgcttgtt ggtgcaggag aatacggtgg caaaattaac tatgtttctg aagacaaata
      541 caaaccgcat ctaagagccc tgagctcaat gagcggagat attgtttaca ttcctcctac
      601 aatgattcca gcaggttaca atatgttatt gagtgtaggc aggccgcatg aaaactatgg
      661 ttatgatgtg acttcaaaca cttctgtcaa aatttacaaa gactaccaat ttgattatcc
      721 gattctattc gctcaagcaa gaggaggaac agatggcggc catgttacat atgaatttca
      781 aaatttgcaa ggcaaattgt ggaaaaacag gctggaattg cgttattcag ataaagatgc
      841 tcaaaatttg ttaacatgtg aaaaagaccc cggtgtactc gaagcgcttg actcaaaaag
      901 cataaaagaa tacaaagaca ctaattcctc caaagcctgt ccaatcgatg cggttaaaaa
      961 caactcattc acatggggcg gtgagacttt ttcgtctgta aaaaattctg taatacataa
     1021 aagcagtgca aagaaaacag gctctttgct gtctgttgat catcaaaacg acaaaagata
     1081 caacattatt gaagaattaa gcaaatacaa tgacaaattc ggcattgaat ttaacaaagt
     1141 aataaaagga gcaaacaacg cttactattt aaaagcaaac ggagaaaggg attttgaaaa
     1201 agaaagtcag gcctgtagcg gctcaaactg gaaaacaaaa gaatactgta tagattatga
     1261 aaataactat ggtgccggcg gaggcggaca gggtatatac aaaaatgtaa tgtatcctga
     1321 aagaatagcc ggaaaagaag ggttgatttt aataaaacag aacaaactct ttgctggact
     1381 aggcggagaa cagggaaatc tttctcaaac aacatatcaa atattgacgc aaaaagttgt
     1441 aatgtttccg ggtaaaggag gcaaaggcgg tgtttattct ccaaatgtaa taaaaacaaa
     1501 ccaaaattat acaaataacg aatgcacaca gggaaaaagc ggagaatcat cttacataaa
     1561 aaattcatcc gaggttttgg gcggtaaagg tgcatcttta attgatccgg ataaaaaaaa
     1621 ttcgtattca gagattgttg atgaaaaaac atctatgcca ataggcggtg acggaaagac
     1681 cgcagttgaa ccaaaagaag gcttgacagg aggtttgggc ggttttagcg gaacaaacga
     1741 ttcttacaac gggctaactg cagccgtttt caaaaacggc gcgcttctcg gtacggtcag
     1801 cacaattaca ggtgcaggct ccggcggtgg aggcggttct ttgactatat caaaaagcgg
     1861 tgacgattat gatatagaac aaggaaacgg cggcgacgga gcttccggtt tggtttttat
     1921 tcagtggtaa tctacttaat aaaagcctga acctctttaa aattagggtg ttttgacgat
     1981 tttagcattt caaaaataac catctcaact gtcaatattt ttacaccctc tttttccata
     2041 agatttattc cggctttgaa ttcgtcagaa tctctggatg cacaggcatc ttttattgca
     2101 aaaacgttgt atccggcctg taaaagagcc atggctgttt gataaacgca gatatgtgtt
     2161 tcgataccaa agataaatac gttttttaca tcgcctaaag cctcttttac accatctgtc
     2221 agcagtgcgt taaagctggt tttttcaaag aattttgcac tgtcaggcac actgtatttt
     2281 acagaatgta ttgttgaacc aagccctttt ggatattgtt ctgtcaaaac tgtttttatg
     2341 cccagtactt tggctgttct tgccagtatt tcagcttttt ttgcgcattt gtctttttgc
     2401 agcattccca caagtttttc ctgcacatca ataaacaaaa atgcagagtt ttgagctgtt
     2461 atatcaatag tcatgggcgt attctccttt taatcgtttg tgtaagtctg aaaatcttta
     2521 ataaaagagt tgagcaaata ctcgagtttt tcctcggaca gctcgtttgt gtccacaaag
     2581 agcttttctg ctttcaaatc ctgatttttt atgttgtgga taatctccac atttattttt
     2641 gtataacccg gatagctcac ggtaaagaag ctttctcctt tttcgttttt gagagaaaaa
     2701 ttgcctcttt cttctgtgac tgtttgggtt atctttgttt caaaaagctt ttcttcattt
     2761 cttttttggg tctgataaaa aagcggagac agtatatttt ctaatttttt tacaaaattc
     2821 tctttgtgga gcttaaagtt ttttacgttc acctcaagat ttacctcttt ttttacgggt
     2881 tcttgagcaa aaaggaaaga gttgcctttt aaaagcgctt ttgaaagagc tttgtttgca
     2941 agctcttctg ccctgtcaaa ggctatgtct ttggtttcta tgtagccggc gcagatggtg
     3001 aaatcggctg taagtgctgt tcttattttt tccagcactt ttagtacgtc ttcttttgca
     3061 gtgtgcctga accacaaata aattttaaaa tcagatgcat aacccagaat atcgcaagag
     3121 cgcactgttt ttttgatagt gttcatcaaa ttttcaggtg atattttgct tcttatatta
     3181 atatccggag cagcaacaac aaatgtgccc cagtcttttt tgctctcttc ttttaaaatt
     3241 gtataggtat aattttccgt ataaacctga ttgtttttgt cgagaatttt taattgtgag
     3301 agtatgtctt ttttgttctg gctttcgtac agattttctc tttttttaag gcaccagagt
     3361 gttcttatgg tgaattcggt ttctgttgca tcaagggtta aaaaatctgt aattcctttt
     3421 tcatatgcac tgcaaagcgt gttttcgtcg aactcttcga acaaaagaat aacagaacac
     3481 gtttttgtat tatcattttg tcttattttt tgtacaaagt ttaggaactc ttcttcgtta
     3541 tcagcacaca ggtgataaaa aataagtacg ggattttttt cttttacttt ttcaagacag
     3601 tcttttgagc ttacactctc aaatacatca gaattcctca ataaaagcac ctttgctttt
     3661 accagttttg agactttttc gttatctgtt attagaagaa tgctgttttc caagggttct
     3721 ccaaaacgtt gtggcaatat tatttactga aaatatttta tatcaaaaca aaagccattg
     3781 cgagcgnncg agcggaattt tgtcatggaa aaaaatacaa agaccatact ttggtattgc
     3841 aaatctctaa ctttttgaga attcagaaca ccttgaaaaa gccgtagtat aagtgtgtga
     3901 agggaacgcc atcccccttt aagtactaat tataatgctt ttgggcattt tgattggttt
     3961 tgctatggtg cgaaaccttt aatcaaaggg cttttgaggc attaagagta tacacggaag
     4021 ttaagaaaga ctctctcaga aaggagctat caccatggct attattgtaa acaccaacat
     4081 tacggcgtta aaaacacaaa agaacttgaa cagtgcaact aattctttga acagtgcact
     4141 tgaaagaatg tcaacaggtt tacgtatcaa caaagcaggc gacgatgctg caggtttgta
     4201 cgtagcaacc ggtttaaaca ctcaaattag gggttcaaaa gtagcacagg ataacgttgc
     4261 aacagggaac aacgtacttt ctacaatgga aggcgactta gacgttatcc tggacaacct
     4321 gaaccgtatc agagacctgg cagtacaagc cgctaacagt atctatgacg aaagtgctat
     4381 ggctgcaatg aaagacgaag tccaacaacg tttggatgaa atcgacagaa tttcacttgc
     4441 atccaacttc aacggcttgc agcttcttgc aggcgaaggc actcttgcag aacagggctt
     4501 gagacttcaa gttggtgcaa actcagatgc agcagctaac tgtatccaga tagatgcaga
     4561 cttctttgca gatgcaatga actctgaaaa ccttggttca gattataacg gacgaatgcc
     4621 tgtcggttct ttgattaaac ctgctgacgg tcttagcggc aacattgatg cagcgtttac
     4681 aaacgcaagt aacgcagctg cttatatcga tgtattagat gctgctatcg ataacatttc
     4741 tactaaaaag tctacaatcg gtgcgacaat gaacagactt gatgcagctt tatcttcatt
     4801 aacaacagtt atcgaaaaca acacagctgc aaaatcaaca attatggacg cagatattgc
     4861 ggaagaatca gcagaatata caaaagcaca gattctgcaa caaacatcat ctgctttgct
     4921 tgttcaggca aatgcacttc ctcaaattgc tatcaacctt gttcaaggtt aataataatt
     4981 acaataaaat acttctttct gagcccgctt atgcgggctc ttaatttttt ccgataattt
     5041 ttaatttttt gatgatagaa tatttataaa gaatcaaata taaaggaatt gagaatgtca
     5101 gaaaacaacc ctactcttaa cacaatcaga annnnnnnnn nnnnnnnnnn nnnnnnntcg
     5161 tatccttatt catatgacaa aaatgcttcg gcaaaaatgc ttcaagaaaa atataaagac
     5221 ctccccgcag gtgaagaaac aaatgacgaa taccttgttg caggcagggt tatggcaata
     5281 agaaacacag gtatgtttat tgacctgatg gatggttcag gcaaaatcca gattttttct
     5341 cacaaagaaa acatggatgc tgaaaaaata aaaactctta aactggtaga tattggcgat
     5401 attgttggtt ttcagggtac tgtaagaaga acacccagag gcgagctcag tatcaaagca
     5461 acagacttca aactgttgtc gaaatctctt ctccctcttc cggaaaaatt ccacggcctc
     5521 actgacgtgg aaacaagata cagacaacgc tatgttgact tgattatgaa tgaagacgta
     5581 agagatacat tcagaaaaag aagcttaatc attcaaaaaa tcagagaata ccttgcaaaa
     5641 caaggatttc tcgaggttga aactcccatc ttgcagacaa ctgcgtcagg tgcaaacgca
     5701 agacctttta caactcatca caatgcgctt gatatggggc ttactttaag aattgcgctt
     5761 gagctttacc tgaaaagact tatcgtaggc ggtgtatcag aaagagttta tgaaataggc
     5821 agatgtttta gaaacgaagg tattgataca agacacaacc ccgagtttac catgatagag
     5881 ctttatcagg catatgcaga ttacaacgac atgatgaccc tgacagaaaa catggttgct
     5941 tatgttgctc aggaagtgct cggcacaatg aaaataaaat acggcgaaaa cgaaattgat
     6001 ttgacaccgc cgtgggatag aaaaacaatg ctcggctcta tcaaagaagc tacaggcgtt
     6061 gattttatgg agatttatga cgcacaggaa gctatcaaag ttgcaaaaac tctcaatgtt
     6121 catgttgatg atgacatgaa ctggggccag gttgtagaag ctgtgttcga agacaaaatt
     6181 gaaccttctt taatccagcc ttgccacatt atcgactacc ccagagaaat ctctccgctg
     6241 gctaaagtcc acagagacaa cgacaggctg acagagcgtt ttgaaacacg tattaacgga
     6301 tgggaacttg caaatgcgtt ttcagagctt actgacccga ttgaccagag aagcagattt
     6361 gaagcacagg cacttgcaaa agcaaacggc gacgaagaag caatggagct tgatgaagac
     6421 tttattacct ctttggaata cggcatgcct ccgacaggcg gtatgggtat gggtatcgat
     6481 cgtctggtta tgcttttgac agattctcaa acaatcagag acgttatcgc attccctaca
     6541 atgagaccta ttgataataa atagttttta acatggggtg attttttcac cccgttattg
     6601 tataactaag atatgttttt caatataaaa ttttataaaa aagttattat tttattttgt
     6661 tttacgttat tgctaaattc attaccagct gaggctttgc aggtggttta tccaaaaaac
     6721 ctcagcactc aggttaatgc agcttccacc ttttttatag ggtctacaga gcctggctct
     6781 tctttaaaaa tcaatgaaat ggatgtaaaa gtctatgaaa acggttcttt tgttcaggtt
     6841 gttccgctca atgacggcga aaatacaatc aaagtcgaat ctacaaaaga ccagacaaaa
     6901 gatacaatca catatattat aaaaaaagtg ccaaaacccg agccggaatc cgttagcgca
     6961 cagcttgagg aattttcgcc cgacgagtat atgtacgcat ctgtagtgaa agacaatacc
     7021 cctcttcgtg cacagcctga tgaaaatgca gccagagtta cacatctcaa caacggcact
     7081 gttttgatga taaacggcaa aaaaggcgga tattacaggg tgtctttgac tccgtcaaaa
     7141 aacgtctggg tcagagcaga aaatattgta aactattcaa aaatcacagg aaaaatgctt
     7201 gctgatgcgt caaacgtgtc tttgagcgag gataaattct acaattatat caagacagac
     7261 ctgtcttttg ctgtgcccta caaggttagt gaaacagata caggattgaa tcttgagctg
     7321 tataatatca aaaataatgc ggccgatacc atacttttta aaacctccgg aagcgtaaaa
     7381 acccttgcag tcaacacggt ttgcgctgac aatacctcat cttattttgt tgaactcaat
     7441 acaaaaatgt ggggttatga cgttttctat gagggcaata cccttgtttt aaaaataaga
     7501 aaagcccctg ttgtagatac ttctgcaccg ctaaaaggga taaaaatagc aattgacgcc
     7561 ggtcatggcg gggatgatgc gggtgcaatc gggcctacgg gtgttaaaga aaaagatatt
     7621 aaccttgata ttgctaaaaa gctgcaaaaa acactcgaag acagcggtgc acaagttgtt
     7681 atgataaggc ctgacgacac aaacgtgcca ttgtatgaaa gaccgctaaa ggcaaaaaaa
     7741 gaaaacgctc tgatactttt gagtctgcat gccaatgcac tggctgacgg tgcagaccct
     7801 tatgcaaaac atggaacctc tgtttattac tacaacagag agtctgttga gctggcaaaa
     7861 acaataagag atgtcttgac aaaagagctg ggcacaaaag atgacggcgt gtgcaaatgc
     7921 agttttgttc ttacccggcc gactatgccc ttgtcggtac ttgttgaagt tgcatatatg
     7981 attcatcctg atgagtacaa actgcttttg gatgacggtt tcagacaaaa agcagcagag
     8041 gctcttaaaa agtctttaga aacttatgtg ttaaattctg ttaaaaattc gcaataatta
     8101 ataacagaac acgtcgaaac attgacactt ttaacatgca gtgatacaat ataaaaaatt
     8161 tatgtttaag gttatgccat agagtttcaa aactcgcttc gggcacaggt ttagactcca
     8221 ttttttaaga agagattttt caagtataag gcaggaaaaa tgcaagtttc tgtaataaaa
     8281 aattcagaac cnnaaaaatg taaatatccc tatggctgcg gcagcaggtg caggtaccgg
     8341 tctgctttta agacactttg tgcctgtgtg gaaatctgaa atggattatg taatgtttaa
     8401 ccagtccgat gccattaaag aagaggcagt gaaaaccgta aaagatagtg tgcttgataa
     8461 ggctaaaaaa caattggcca aacagcctaa aaatgaagct cttgaccttt ttataaaaag
     8521 agcacaggca aaagatgcca aagaaagtat tgctatcaaa gaagaaatcc aaaaagcttc
     8581 caaaacagta agaaaacagg taaaaatttt aattgatgat atagctgtca aaatgcgtgc
     8641 agcaaaaaat cttaccgatg caaatattaa aaacgccgta aaacaaaaac gctccatcag
     8701 cgcatttttg ctacccggaa tagctctggg tgctcttggt gcttatgttt ataacgttat
     8761 cggcacaatc agcgaagaat aatttgatac cggcaaaaat tannttaaac tgtgaatagg
     8821 agcagggatt ctgccgcctc tttgcacaaa ttttgagctg gaaagagtgt ttacactcat
     8881 aatcggtgct tcgccaagca gcccgccaaa aacaattttg tctcccacgg ttttgtttgg
     8941 cgcgggaata atcctaaccg cagtggtttt cttgttaatc atgccaatag ccatttcatc
     9001 tgcaatgatt cctgagattg tatcttcggg tgtatcaccc gggattgcta tcatatccag
     9061 ccccacagag catacgctgg tcattgcttc gagtttgtca aacgttaaac agcctctttg
     9121 tgctgcttca atcatgcctg catcttccga aacaggaata aatgcaccgg acagaccgcc
     9181 tacgtgtgag cttgccatga tgccgccttt tttcaccgca tcattgagca tagccagagc
     9241 agctgttgtg ccgtgagcac ctgcatgttc aagtcccatt gcctgaaaaa ttcctgcaac
     9301 actgtctcca acctccggag tgggcgcaag agaaaggtct ataataccaa aaggtatgcc
     9361 cattttcctt gccatgtcgc ggccgaccag ctcacctgta gaagtaattt tgtaggctat
     9421 ttgcttaatc ttgtttgcca tttctccaaa agatgtgctt tgaggcagag attctattgc
     9481 ggcacgcact acgccggggc cggaaacccc tacgtttaaa gcacattcgc tctcgccgta
     9541 tccatgaaaa gcgcctgcca taaaaggatt gtctccggga acattacaaa aacacacaag
     9601 ctttgctgcg cctattccgt cacggtcggc tgtcagctgt gctgcttttt ttatcgttgc
     9661 acccattttg agcacggcat ccatgtttat gccagctttt gaactggcaa catttactga
     9721 tgagcagatt ctttctgtgt ttgcaagtgc ttcgggtatg ctttctatca gggcaatatc
     9781 gccttttgtg cagccctttt ctacaagagc accaaaaccg cctataaagt ttaccccgac
     9841 atcttgtgct gctttgtcca gaacctttgc aaggtataca tagtcgtagt ctttgcaaga
     9901 ttcaccaaca agcgatatag gagtaacgga gattcttttg ttgataatgg ggatggagta
     9961 ttcgtcttca atctcctgtg ccatggacac aaggtttttt gcatattttg taatcttgtt
    10021 ataaaccttt tctccgaccg cttttacatc agtgtcacag cagtcgcgaa ggctcaaggc
    10081 cagtgtaacc gttctgatat cgaggtggtg aacccttatc atgtctattg tttcgagaat
    10141 agaatcagca tttatagatg tcattgtttt cccttttaaa aattaaatgt tgtgcatttt
    10201 gtcaaaaatt tgtttttttt gtatccaaat ttccattttg agctcttcgc ctgctttttg
    10261 cattgcttct tttatttctt taaaagattt ttctgattga gaaatatctc ctaataaaaa
    10321 cataacaaag taatcctgca tgatgctttg ttttatgtct tctatgttaa ctttgtaatc
    10381 tgcaagaaca gcggcaactt ttgcaacaat accgattctg tctacaccgg aaaccgttat
    10441 gattattttg ttttcgcttc tgttttccat tgtgctcctt ttggtttttt tttaaataat
    10501 tttgctgaca gatttatttt acattattca gatacttaag tcaccggaaa aaattatttt
    10561 ttcctcatca tctgagtttt ttacgaccag attcccgttt tcatccattt taacggcaaa
    10621 atactcttgt ctttgggagt tgtctgtttg ttgaataaac actgtttttc caagaaaatt
    10681 gtttctcttc aaatattcct gttcaaaaga gcaaaagccc cgttcgatta cgtcttggta
    10741 ttttgaaaaa aactctttta aaagtttttc caaaaactct tgtctgtcaa tagagtgacc
    10801 ggttaacaag tttaaagatg tggcgggnng ggtttttcta ttttttcaac aaggcttaaa
    10861 ggcatgttaa ggtttacgcc tatgccaagc acaacacctt gaataatatt ttttttgagc
    10921 acgctttcac aaagtattcc acagactttt tttccgtcaa tcaagacgtc attggggtat
    10981 tttatttgcg gttttagccc gtatgtttct atgactttgc aggtgcaaac actcatgtac
    11041 tgggtaagat ttgctatgtg tgcgattttt tcaggtttca acaccagtga aaggcataga
    11101 ttgtcagtgg tttcacaaat ccaaactctg ttaaaacgac ccttgccctg tgtttgcaca
    11161 agcgcactca cagcggtttt gtcttttagt ttatcaaaat ttttgacccc gtaagtgttt
    11221 gttgaatcta tgctgtcaaa ttgtataata tcaaaattat tcattactgt tttttctaag
    11281 cattaaaaca tttcccgctt cgtcatagca ggcgttttct acccagtggc ctagcagttt
    11341 ctggtttttg tcgtagagat actgttctgt tttagaaaca acaaaggttg cgtttttaaa
    11401 cgcgccgtat ctgttgtaag ccacagagcg gtgcgggtat acgtcaaaag gtttgttcag
    11461 tacatctact ttaaaaagcg aaccgaactc gtcgtaataa tagttgtgat aagggtcatt
    11521 agagtatctt acaccgtatg ttccgtcgga aaaaagcgca agatagcggt tggctatttt
    11581 tgttgtgttg ttttttagcg cgttatagtt tgcctcgtgg ttggggtctg tccaatagtc
    11641 tctgaactcg ttgggcccca gagcataatt aatgttgttg aatgtttctt ctcttgctat
    11701 ttctgcatct atttgtgcat taccctgcaa aatcaaagca gaagcgggta a
//
LOCUS       DABS01000132            6980 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_17290, whole genome shotgun sequence.
ACCESSION   DABS01000132 DABS01000000
VERSION     DABS01000132.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6980)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6980)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6980
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..855)
                     /locus_tag="CPT85_05690"
     CDS             complement(<1..855)
                     /locus_tag="CPT85_05690"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22864.1"
                     /translation="MSSLNQFQNQLKKTPDINAGNPSNNFGRPNLNPNNGGLLEKTNV
                     GNILNGSSNFNAFMARQYTLDPIAYGSTGTSSSIGGMGFLETTTAVLTGLTGLATLTT
                     AGIGIAQGIKTLKKSSSSSDTASASDQTLATLTQTADEYDKKSDFNSMRNTAENLSTA
                     INTANTKLNNAKTNLASAEKKLTNLNSDKAKFAQQLETFNTEKDAVQTSLESHKNALS
                     QLEAVPEAQRTPEQKAQIQELKRAIQEEENALKTTYSDNRRRTIENQIIRIDDELQEC
                     QNKIYTYKN"
     gene            1023..1958
                     /locus_tag="CPT85_05695"
     CDS             1023..1958
                     /locus_tag="CPT85_05695"
                     /inference="COORDINATES: protein motif:HMM:PF00294.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="DAB22865.1"
                     /translation="MGEKLDLITIGESLIELSSDKSLAYADTLEKYYGGDTLCTAVAA
                     SRLGSKAGYITRVGNDPFREFLMDSWQSEGLDISQIKLIDGFNGVYFVGHPEFGAKEF
                     VYYRKKTAATKLSVDDISQEYILSADVIYATGVTQSLSLNAKEAVKKAFMIASEHNMS
                     TSYDPNYDCRLWSTEDAKDAMSELEPYIDIMFLSLEHDVVKLFEIDSPDKCIKHLWDK
                     GIGTVVVKSAKDKGYFVGYEGDIIFVNFYTEEVSDSTGSGDAFNGAFLHGLNSGMTPF
                     EAAKLASIVAGLQCHGMGAIKSIPYKEQVYAAYYE"
     gene            1968..2900
                     /gene="csaB"
                     /locus_tag="CPT85_05700"
     CDS             1968..2900
                     /gene="csaB"
                     /locus_tag="CPT85_05700"
                     /inference="COORDINATES: protein motif:HMM:TIGR03609"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase CsaB"
                     /protein_id="DAB22866.1"
                     /translation="MTNNYKHIAVSGYYGFENFGDEAILSVLVKELKQQGYYVTVFSK
                     SPEKTGLKLGVNSVYTFDLKKLLKTLKESDVLISGGGSLLQDATSLKSLLYYLFVICS
                     AQFFKKDVIIFAQGIGPIRNFVGRLLTKNALKKCKYITVRDEKSLFRLRGWKLNPDLV
                     SDPVWNMDIKEYIPMNRVGVQLRSWKGLSQKYLFALARQINANFSDKEIYIYSFQDAL
                     DLELCKHFEAQLKLVNPQIKTVLLNNLTIDETIQSFSNLDFLIGMRYHACLLALKYGI
                     PTXMTRRWKRLLKGLNCLVQCSMTKIKWMSYLLH"
     assembly_gap    2802..2803
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3222..3566
                     /locus_tag="CPT85_05705"
     CDS             3222..3566
                     /locus_tag="CPT85_05705"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22867.1"
                     /translation="MNNISFRAKIHGLPLDVTAKLFEMRTEDDTKHEIRLLERTASNN
                     KDTFVMSKNGKVTVEYQPTFTPRNPGLYKPDDLVRIFQTMKHLEAQNVLKKSLAARKT
                     QLKKADYAAFQE"
     gene            complement(3627..6077)
                     /locus_tag="CPT85_05710"
     CDS             complement(3627..6077)
                     /locus_tag="CPT85_05710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="DAB22868.1"
                     /translation="MAYLEKWSGMLKGAMLSAFAMFLAANSAFAGEADLVVPNLSADP
                     NSFNLLLVGIGISVLGLVFGLIEFVKVKNYKVHEAMANVGNTIFETCKTYLIQQGKFL
                     LALEILIGACIAFYFGGLQHMGFKGVGLILLWSVIGILGSYGVAWFGIRMNTLANART
                     AFASLEAKPLKVLNIPLKAGMSIGVLLVSVELIMMLIILLFVPGELAGACFIGFAIGE
                     SLGASALRVAGGIFTKIADIGSDLMKIQFKIKEDDPRNPGVIADCTGDNAGDSIGPTA
                     DGFETYGVTGVALVSFILLAVAGAENQIHLLTWIFTMRFLMIVTSVVAYWINTGLTEV
                     VFGKAEKVDFEKPLTNLVWLTSILSIVMTFGVSKWLLGGLGGNLWLVLAGIISCGTLG
                     AALIPEFTKIFTSPNAIHTKEVVTASREGGASLTILSGIVSGNFSGFWIGMVIVFLMG
                     LAYYFSTMIPDALMIYSSIFAFGLVAFGFLGMGPVTIAVDSYGPVTDNAQSVYELSLI
                     EEREGIAEEIEKDFGFKPNFDVAKQQLEENDGAGNTFKATSKPVLIGTAVVGATTMIF
                     SLILVIKNTLGIEPEAVLNLLNPYTILGLLAGGAVIYWFSGASMQAVTTGAYRAVEYI
                     KKHIKIDDESVKTANVANSKEVVKICTQYAQKGMVNIFIALFAFALAFACLSAPACKT
                     VAPVAFFVSYLIAIAIFGLFQAVFMANAGGCWDNAKKIVECDLCEKGTPLHDATVVGD
                     TVGDPFKDTSSVAMNPIIKFTTLFGLLAMEISINESFRHIAPIAGWIFLVIALVFVWR
                     SFYAMRIPDKKEMDEAQE"
     gene            complement(6179..>6980)
                     /locus_tag="CPT85_05715"
     CDS             complement(6179..>6980)
                     /locus_tag="CPT85_05715"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22869.1"
                     /translation="KCNFIGSGGSADVYRIPDTPYCVRIVKKKKAETLGKSLNFSLSE
                     SDKINHIVAKSGNGSAIMRYIEGENCFTYQNKKEIVTLPSESYHRLFKQICHAKENNM
                     VFDCDATNIIYNAKDKTLTAIDFYKMDKNYPENVPPLSSIFSALCSHKTDTFQDIQHN
                     KLLVGALLKAGLKEMEYGVKPCISISEFDFNKLLLKFEAHNTEQLPAQYEFLKKSITD
                     IQCLKLKELIGEDVKNELGGKIKFAKALIDQVLCESRNSNFKNVVLWQ"
BASE COUNT         2156 a         1276 c         1291 g         2255 t
ORIGIN      
        1 gtttttataa gtatatattt tattttgaca ttcttgtaat tcatcatcta ttcttataat
       61 ctgattttct atggttcttc ttctgttatc agaataagtt gtttttaatg cattttcttc
      121 ttcttgaata gctcttttaa gctcttgaat ttgagctttt tgttccggag ttctttgtgc
      181 ttcgggaaca gcttccaact gtgaaagtgc atttttatgt gattccaaac ttgtttgtac
      241 agcatctttt tcggtgttga aagtttcaag ctgctgtgca aattttgctt tgtcggaatt
      301 aagatttgtc aatttttttt ctgcacttgc aagatttgtt tttgcgttat tcaattttgt
      361 atttgcagtg ttaattgctg tgcttaaatt ttcagcagta ttgcgcattg agttaaaatc
      421 tgatttttta tcatattcgt ctgctgtttg tgtcaatgta gccagtgttt gatcagatgc
      481 ggaagcagtg tcggaagaag agctgctttt tttcaaagtt tttataccct gtgcaattcc
      541 aataccggct gttgtaaggg ttgcaagacc tgttaaccct gtaagcactg cggttgttgt
      601 ttctaaaaag cccattcctc cgattgatga gcttgtgcct gtagaaccgt atgcaatagg
      661 atctaaagta tattgtctgg ccataaaggc gttgaaattt gatgaaccgt ttaatatgtt
      721 tcctacatta gttttttcga gaagacctcc gttatttgga ttcaaatttg gacgtccaaa
      781 attattagag ggattacctg cgttaatgtc aggtgtcttt tttaattgat tttggaattg
      841 gtttaaacta gacattttct tgcctctcta aataatttat tctctacata tatataaagt
      901 atatatttat ttaaaaattg ccttttttgt atatactctt gtaatatttc ttaacaatca
      961 ttttgttaca attgggcaat ctctctgtat ttgtgctaaa ttcgtacata aggtaaatta
     1021 ttatgggtga aaaattagat ttaattacta tcggagaaag ccttattgag ctttccagcg
     1081 ataaaagtct cgcttatgcc gatactttgg aaaaatacta cggcggtgac actctctgta
     1141 cagctgtagc ggcatcgcgt cttggctcta aggccggata tattaccaga gttggcaatg
     1201 acccttttag agaatttctg atggacagct ggcagtcaga agggctggat atttctcaaa
     1261 ttaaacttat tgatggtttt aacggagtct attttgtcgg acatccggag tttggcgcaa
     1321 aggaatttgt ttattaccgc aaaaaaactg cagcaaccaa gctttctgtt gatgatattt
     1381 cgcaagagta tattttgagc gcagatgtta tttatgcaac aggggttact caatcattgt
     1441 ctttgaatgc gaaagaagct gtgaaaaaag cctttatgat tgcatctgag cacaatatgt
     1501 ccacatcata tgaccccaat tatgattgca gattgtggtc aacagaagat gcaaaagatg
     1561 caatgtcaga gcttgagccg tatatagata taatgttttt gagtcttgag catgatgtag
     1621 tgaagctttt tgaaattgat tctccggaca aatgcattaa acacctgtgg gataaaggaa
     1681 taggcactgt cgttgttaaa tcggcaaagg acaagggcta ttttgtaggt tatgaaggtg
     1741 atattatctt tgttaacttc tatacagaag aggtgtcaga ttctacaggc tcgggtgatg
     1801 cctttaacgg tgcgttttta catggcttaa attccggaat gacacctttt gaagctgcta
     1861 aactggcttc tattgttgca ggtttgcaat gccatggtat gggggcaatt aagtccattc
     1921 catacaaaga acaggtctat gcagcatatt acgaataacg gaacattatg acaaataatt
     1981 acaaacatat agcggtttca gggtattatg gatttgaaaa cttcggtgac gaagcaattt
     2041 tgagtgttct tgttaaagag ctcaaacaac agggttatta cgtgactgtg ttttctaaaa
     2101 gccctgaaaa aacagggcta aagctcggtg ttaactctgt atacactttt gacttaaaaa
     2161 aattgttaaa aacactcaaa gaatcagatg tcctgataag cggcggcgga agcctgcttc
     2221 aagatgcaac tagtctcaaa agtcttcttt attatttgtt tgtaatatgc tcggcacaat
     2281 tttttaaaaa ggatgtaata atttttgcac agggtattgg cccaatacga aattttgtcg
     2341 gacgtctgct gacaaaaaat gctctaaaaa aatgtaaata tataacagtt agagatgaaa
     2401 aaagcctgtt tagactccgt ggttggaaat tgaaccctga tcttgtttct gaccctgtgt
     2461 ggaatatgga tataaaagaa tacattccaa tgaatagagt aggagtgcag ttaagaagct
     2521 ggaaagggtt gtctcaaaag tatttatttg cactggcaag acaaatcaat gctaattttt
     2581 ctgacaaaga aatatatata tactcctttc aagatgcact tgatttggag ttgtgcaagc
     2641 attttgaggc acagttaaaa cttgttaacc ctcaaattaa gactgtactt ttaaacaatc
     2701 ttacaattga tgaaactatt caatcttttt ctaacctgga ttttctcatt ggtatgcgct
     2761 accacgcctg ccttcttgca ttaaaatacg gcataccgac tnngatgacg agaaggtgga
     2821 aaagattgct aaaaggtttg aattgccttg ttcaatgctc aatgacgaag ataaaatgga
     2881 tgagttattt actgcactga aaaatataca accggcttct atcaaggcaa aggccaaaga
     2941 gtgcattttt gatttttcta aaattttgtc caatattaat tcataatata taaacgcaaa
     3001 aaaaaaccga cttacgccgg ttaaacttta ccacatatta gagagaggaa ttagagagag
     3061 agaaattttt aaatctttgt ttattccttc tattatatat gttccctttt gtaaaaaatt
     3121 aataacagtt ttagtttgat ttttaatatt tctttacaaa tatatattca aataacaaaa
     3181 ataatttatt acggtttata tacctgatac aaggaggtat aatgaataat atttctttca
     3241 gagctaaaat acacggtctt ccactagatg ttactgcaaa actgtttgaa atgagaacag
     3301 aagatgatac aaaacacgaa atacgcttgt tagaaagaac agcgtcaaat aacaaagata
     3361 cttttgttat gagcaaaaac ggaaaagtta cagttgagta tcaacctacc tttactcctc
     3421 gtaatcccgg tttgtataaa ccggatgatc ttgtgagaat attccaaaca atgaaacatc
     3481 tggaagctca aaatgtttta aaaaaatcac tggcagcaag aaaaacacaa ttaaaaaaag
     3541 ctgattatgc tgcatttcaa gaataaactt tataataaaa aggccctctg ttactaagca
     3601 gagggccttt tttatgcaat cagctcttat tcttgagctt catccatttc ttttttgtca
     3661 ggaattctca ttgcatagaa tgatctccat acaaatacca atgcaatcac gaggaatatc
     3721 catcctgcga taggagcgat atgtctgaat gattcattga tagagatttc catagccaat
     3781 aaaccgaata aagttgtgaa cttgataatc gggttcatag ctactgatga agtatctttg
     3841 aacgggtcac caactgtgtc gcctactact gtagcatcgt gcaaaggagt acctttttca
     3901 cagaggtcgc attcaacgat tttcttagcg ttatcccagc atccgccggc attagccata
     3961 aatacagcct ggaacagacc gaaaatagca attgcaatca ggtagcttac aaagaatgct
     4021 acaggagcaa ctgttttgca agccggagct gataaacaag caaatgctaa agcaaatgca
     4081 aacaatgcga taaagatgtt aaccatacct ttttgtgcat attgagtaca gattttaaca
     4141 acttctttag agtttgcaac gttagctgtt ttaacgcttt cgtcatcaat tttgatgtgt
     4201 tttttgatgt attcaactgc tctgtatgca cctgttgtaa cagcctgcat agaagcacct
     4261 gagaaccagt agattactgc accaccggca agcaatccga ggattgtgta ggggttaagc
     4321 aggttcaata cagcttcggg ttcaatacca agtgtatttt tgataaccag aatcaatgag
     4381 aaaatcattg ttgtggcgcc aactacagct gtaccgataa gtacaggttt agatgtagct
     4441 ttgaatgtgt tgccagctcc atcgttttct tcgagctgtt gttttgcaac atcaaagttt
     4501 ggtttgaaac caaagtcttt ttcgatttct tcagcaatgc cttctctttc ttcaatcaaa
     4561 gacaattcgt aaacggattg cgcgttatct gttacaggac cgtagctgtc tacagcgata
     4621 gtaacaggac ccattcctaa gaaaccgaat gcaaccagac caaatgcaaa tatagatgaa
     4681 taaatcatca aagcatcagg aatcattgtg ctaaagtagt atgctaatcc catcaagaat
     4741 acgattacca tgccaatcca gaagcctgag aagttacctg aaacaatacc ggaaagaatt
     4801 gttaaagatg caccgccttc acgtgaagct gtaacaactt cttttgtgtg aatagcgttc
     4861 gggcttgtaa atatttttgt aaattcagga atcaaagcag cacccaaagt accgcaagag
     4921 atgatacctg ctaatactaa ccagaggttt ccgcccaagc cgcctaataa ccatttgctt
     4981 acgccgaatg tcataacgat tgaaaggata gaggttaacc aaacaaggtt agttaatggt
     5041 ttttcaaagt caactttttc agctttgcca aaaacaactt cggtcaaacc tgtgttaatc
     5101 caatatgcaa caacagatgt cacaatcatt aagaatctca ttgtgaaaat ccatgtcaac
     5161 aaatgaattt gattttcagc acctgcaacg gccaacaaga tgaatgaaac aagcgcaaca
     5221 cctgttacac cgtaagtttc aaaaccgtca gctgtaggtc cgatagagtc gcctgcgttg
     5281 tcgcctgtac agtcagcaat aacaccgggg tttctcggat catcttcttt gattttgaat
     5341 tgaattttca tcaagtcaga accgatgtca gcgatttttg taaagatacc gcctgctaca
     5401 cgaagagctg atgcacctaa agattcaccg atagcaaatc cgataaagca agcaccggct
     5461 aattctccgg gaacaaataa taaaatgata agcatcatga ttaactcaac gctcaccagc
     5521 aatacaccga tactcatacc ggcttttaaa ggaatgttta aaaccttcaa aggtttagct
     5581 tccaaagaag caaatgctgt tcttgcgtta gcaagtgtgt tcattctgat accgaaccat
     5641 gctacgccgt aagaacctaa aataccgata acagaccata aaaggattaa accaacacct
     5701 ttaaagccca tgtgctgcaa tccgccgaag tagaatgcaa tacaagcacc aatcagtatt
     5761 tccaaagcta gcaagaattt accctgttgg ataaggtaag tcttacaagt ttcaaaaatt
     5821 gtgtttccga cgttagccat agcttcgtga actttgtaat tttttacttt tacaaattcg
     5881 attaagccga aaactaagcc taaaacggaa atgccgatac caacaagcag taagttaaag
     5941 ctgttcgggt cggcagaaag atttggtaca accaaatcgg cttcccctgc gaatgcagag
     6001 ttggcagcca aaaacatagc aaatgcactg agcattgctc cttttagcat acctgaccat
     6061 ttttctaagt aagccatctt ttttctccct tgtcctcttc catcaaaagg accttttcta
     6121 cacttaagct aattgtacta taaattcggg ttttagcaag gtgtttacat tgaaaaaact
     6181 attgccacaa tactacgttt ttaaagttgc tatttctgct ttcacaaagt acctgatcaa
     6241 ttagtgcttt tgcaaatttg atttttccgc ccagttcatt ttttacatct tcaccaataa
     6301 gctcttttag ctttaaacac tggatatcgg taatggattt tttcaaaaat tcatactgtg
     6361 ccggcaattg ctctgtgttg tgtgcctcaa actttaacaa cagcttatta aaatcaaatt
     6421 cggaaatact tatacaaggc ttaactccgt attccatttc tttcaatcct gcttttaaca
     6481 atgctccgac aagcaatttg ttgtgctgta tatcctgaaa agtatcagtt ttatggctgc
     6541 ataatgcact aaatatgctt gatagaggag gtacgttttc cggatagttc ttatccattt
     6601 tataaaaatc tattgcagtt agtgttttat ctttagcatt ataaataata ttggttgcat
     6661 cacaatcaaa caccatgttg ttttcttttg catgacagat ttgtttaaac aacctgtggt
     6721 atgactctga tggcagtgtt acaatttctt ttttattttg ataagtaaag cagttttcgc
     6781 cttcaatata cctcataatt gcagagccgt ttcctgattt tgccacaatg tgatttattt
     6841 tgtcactttc agacaggctg aagtttagtg atttgcctaa ggtttctgct tttttctttt
     6901 ttacgattct tacacagtag ggggtgtcag ggattctgta cacatcagcg ctgcctcctg
     6961 agccaataaa attgcatttt
//
LOCUS       DABS01000133            3821 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_26533, whole genome shotgun sequence.
ACCESSION   DABS01000133 DABS01000000
VERSION     DABS01000133.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3821)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3821)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3821
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     assembly_gap    190..220
                     /estimated_length=31
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <221..1512
                     /locus_tag="CPT85_05720"
     CDS             <221..1512
                     /locus_tag="CPT85_05720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011247859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="DAB22836.1"
                     /translation="KARQILDSRGNPTVEVDVTLSCGVVGRAAVPSGASTGIFEALEM
                     RDGDKSVYCGKSVMKAVDNVNNVIAPELIGENAADQQAIDKLMIELDGTENKSKLGAN
                     AILGVSLACAKASAMAFEMPLYRYLGGINATTLPVPMMNVINGGAHADNNVDFQEFMI
                     TPVGASSFAEAIRMGAEVFHNLKSVLKAKGMVTSVGDEGGFAPNLSSNEEALKVIVEA
                     IEKAGYTTEQVKICLDVASSEFYEDGKYNLAGEGKVLSREEMVDFLANWVDKYPIISI
                     EDGMAEEDWEGWKMLTDKIGSHCQLVGDDLFVTNTKRLAKGIETGTANSILIKVNQIG
                     TLTETLNAMNMAFKAGYTAISSHRSGETEDTFIADLAVATNCGQIKTGSASRTDRICK
                     YNQLIRIEEELGCAAKYPGLKAFNGQSCGKSACSCGC"
     gene            1743..1949
                     /locus_tag="CPT85_05725"
     CDS             1743..1949
                     /locus_tag="CPT85_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006524639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/Cl family transcriptional regulator"
                     /protein_id="DAB22837.1"
                     /translation="MIRNNLSEIMGRKRINCAELSRISKISYETVHRLYHEKSKGIEF
                     STLNKLCWALECTPSEIFEYIEDK"
     gene            complement(2037..2585)
                     /locus_tag="CPT85_05730"
     CDS             complement(2037..2585)
                     /locus_tag="CPT85_05730"
                     /inference="COORDINATES: protein motif:HMM:PF03729.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22833.1"
                     /translation="MADMVKRFCNTFLVEGIFVLIVGMLLLILPQVSTLALSLMISVA
                     LILAGIYKFISSIIRRDEIEKSWLSATIALLMIVTGAYLTIRPLFNLFLLTMGVGIYF
                     VLEGVNSMVMAFESKGVLKHWWVGLLAGLAQFALAFIILFGLPGTALFTIGVLIGVSM
                     LLSGIALISVYTGAGCPRMMEA"
     gene            2889..3377
                     /locus_tag="CPT85_05735"
     CDS             2889..3377
                     /locus_tag="CPT85_05735"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22834.1"
                     /translation="MKIYCCGLVYSTQDPETYWCIETYHLKKPVDNIIGGKRVFKQII
                     YALCCKKNGCCKIEIHSYTKENGRLKLLYTQSIKGRGAISFLERTKDMRIRQPQCCPL
                     KTYQYSKKIPWVYGKTLNSTTQVVRYIDESGNRQIFKAANPQGQKLQSEIIKSEIIRK
                     EV"
     gene            3380..3685
                     /locus_tag="CPT85_05740"
     CDS             3380..3685
                     /locus_tag="CPT85_05740"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22835.1"
                     /translation="MLQDILNTSHDVIVEGKKYQFEFDHSAYAAFEQQSHKSIFEIYD
                     RLLATNNISYMESLMIVSAGLLKYHCTQEICDFQELLRSQPGXRTGYGSFYCTAFTA"
     assembly_gap    3639..3640
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1251 a          718 c          747 g         1072 t
ORIGIN      
        1 aaagcgctta ctctaattac agagcttgat attcctgtga taggtgccga gatagagaaa
       61 aatcatgctt ctttcaaggc gttttgccag ttgaacaata taaaaatata acggtttaaa
      121 gtaaacgaaa atccttgtat tatatttgtt ttcgtacgat aatcatggca agaaagataa
      181 aaatgttcan nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn taaaagcaag acaaattctt
      241 gactcaagag gcaatccgac tgtagaagtc gacgtaacac tttcatgcgg cgttgtaggc
      301 cgtgcagctg taccttcagg tgcttcaaca ggtatttttg aagctcttga aatgagagat
      361 ggcgacaaat cagtttactg cggtaaaagt gttatgaaag ccgttgataa tgtaaacaac
      421 gtaattgcac ccgaactcat cggtgaaaat gctgctgacc aacaagcaat cgacaaattg
      481 atgattgagc ttgacggtac tgaaaacaaa tcaaaattgg gcgctaacgc tattttgggt
      541 gtttctttgg cttgtgctaa agcatctgca atggcttttg aaatgccttt atacagatac
      601 cttggcggta tcaacgcaac tacacttcct gtaccgatga tgaacgtaat caacggtggt
      661 gctcacgctg acaacaacgt tgacttccaa gaattcatga ttacacctgt tggagcttct
      721 tcttttgctg aagctatcag aatgggtgct gaagtattcc acaacctcaa atcagttctt
      781 aaagctaaag gtatggttac ttctgtaggt gatgaaggtg gttttgcacc taacctttct
      841 tctaacgaag aagctttgaa agttattgtt gaagctatcg aaaaagcagg atacacaact
      901 gaacaggtta aaatctgctt agacgttgct tcttctgaat tctatgaaga cggcaaatac
      961 aaccttgcag gcgaaggcaa agttctttcc agagaagaaa tggttgactt ccttgctaac
     1021 tgggttgaca aatatcctat catttcaatc gaagacggta tggctgaaga agattgggaa
     1081 ggctggaaaa tgcttactga caaaatcggt tctcactgtc aattggttgg tgacgatttg
     1141 ttcgttacaa acactaagag attggctaaa ggtatcgaaa caggtactgc taactctatc
     1201 cttatcaaag ttaaccaaat cggtactttg acagaaacat tgaacgctat gaacatggca
     1261 ttcaaagcag gatacacagc tatttcttct cacagatcag gcgaaactga agatacattc
     1321 atcgctgact tagctgttgc tacaaactgt ggtcaaatca aaacaggttc tgcttccaga
     1381 acagacagaa tctgcaaata caaccagtta atcagaattg aagaagagct cggttgtgca
     1441 gctaagtacc ccggtttgaa agctttcaac ggtcaatctt gcggcaaatc agcttgttct
     1501 tgcggttgct aattttttag caggctgata ggcaggtata aaaagagatg aggttgcagt
     1561 attgcagcct cattttttat tttattagga aggatatatg tatttcagct attttgcttc
     1621 acgagttgat taagtcggca ttttgttaaa ttatgtttcg tattttatcc aacatgtctt
     1681 atattctaaa ggttgtatta gtgaatatca acgatatttt aaataactgt tacaatcccc
     1741 atatgataag aaacaattta tctgaaataa tgggcagaaa aagaatcaac tgtgcagagt
     1801 tgagcagaat ttctaaaatt agttatgaaa cagtacacag actctatcat gaaaaaagca
     1861 aaggcataga attttctacg ctgaataaat tgtgctgggc tcttgaatgc actccctctg
     1921 aaatttttga atacatagaa gacaaataac agaaggaccc gaagccaaag ccccgggtcc
     1981 acagcagaat gaataagttc aatacggctt ctgctgtcaa agttgttaaa ttatcgttat
     2041 gcttccatca tccttgggca tcctgcgcct gtatagaccg aaattaaagc tatacctgac
     2101 aagagcatac ttacaccgat taacacgcct attgtaaaca atgcggtacc cggcaagccg
     2161 aacaggataa taaaagccaa cgcaaattgt gcaagtcctg caagcagacc tacccaccag
     2221 tgtttgagca cgcctttact ttcaaaagcc ataaccattg agtttacgcc ttccaaaaca
     2281 aagtaaatac ccacacccat tgtcagaaga aacaggttaa ataacgggcg gattgtcaaa
     2341 tacgcacctg ttactatcat cagcagcgca attgttgctg aaagccatga tttttctatt
     2401 tcatcacgtc tgataattga gctgataaat ttataaatac ccgctaatat caacgcaaca
     2461 cttatcataa ggcttaacgc taaggtggac acctgtggca gaatcaacag cagcatacct
     2521 actatgagca caaatatacc ttccacaagg aatgtattac agaatctttt taccatatct
     2581 gccataatat taactccttt tttcctttca ccttttgatt gtatagcgtt gtgctctttg
     2641 tttcattggc tgtttgttta atttactttt attgccatat cgggggtata tagcagattt
     2701 tacaaatttg tcaaggcaaa aactttaccc gacagggtaa aaattatgtg ctataaagaa
     2761 aacgtaaact gtttacaaaa aagttgtaag cacaatttac actcacgggg ataactgtgc
     2821 ccaaaatacc tgctttttag cacaaacttt ttttagacat atacttcatt tatcgaggag
     2881 aagaaataat gaaaatttat tgctgcgggc ttgtgtattc cacacaggac cccgagactt
     2941 actggtgtat tgaaacatat cacctcaaaa agcctgtgga caatattatc ggcggcaaaa
     3001 gagtttttaa gcagatcatt tacgctcttt gctgcaagaa aaacggatgc tgcaagattg
     3061 agattcacag ttacacaaaa gaaaacggaa gattaaagct tttatacacc cagtccatta
     3121 aaggacgcgg tgcaataagc tttttagaaa ggacaaagga tatgagaata agacaacctc
     3181 aatgctgccc tttaaagact tatcaatatt ccaaaaagat accctgggtt tacggcaaaa
     3241 ccctgaacag cacaacgcaa gtggtacgct atattgatga gtcgggcaac cggcagatat
     3301 tcaaagctgc aaatccgcaa ggacaaaaat tgcagtccga aattattaaa tcagaaataa
     3361 tacgaaaaga ggtataaaaa tgttacaaga tattttgaac acatcacacg acgttattgt
     3421 agaaggcaag aaatatcagt ttgaatttga ccacagtgca tatgctgcat ttgagcagca
     3481 gtctcacaaa agtatttttg aaatttacga caggcttttg gcaacaaata acatatctta
     3541 tatggaatct ttgatgattg tatcagcagg actgctcaag tatcattgta cgcaggagat
     3601 atgcgatttt caggaattgt tgaggagtca gcccggtann agaacaggtt acggcagctt
     3661 ttattgtacc gcttttaccg cctgaaattt tgagaagtgt taaaaaaaaa gccccgagaa
     3721 aaatccgcaa gaaatcaaag atataagata taactgggat tacaattata ccgttgcact
     3781 ttctgttttg gggtggagtg acagagaatt ctggtgcgcc a
//
LOCUS       DABS01000134            4658 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_18699, whole genome shotgun sequence.
ACCESSION   DABS01000134 DABS01000000
VERSION     DABS01000134.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4658)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4658)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4658
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..2113
                     /locus_tag="CPT85_05745"
     CDS             <1..2113
                     /locus_tag="CPT85_05745"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00211.18,HMM:PF05226.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22762.1"
                     /translation="TAVLIILLSLFAYFFKDFFNYFENKFIDARSYLSVDGGIFSQKF
                     KKSDSDIVIISVNDLTQYEAARSSELNLTRWPWSRVVWAKIINFIEAQKPAVLIVDLN
                     FSNYEDLSRNYTSPDMVLADTIGYYDNIVLSTALRTPYKDTDKIDPAKILENFENPYN
                     PASNTLNMYIDNKQLDKNIAYYSHTPIPNIFTNSTTMGVTNLVTGNNKNENIRYSQPV
                     YKLIKGNKEYYIPSLALAALLKKEGIGKLAEEIPIENNILKVGKHRIRLDNNGQTFIN
                     WHSHENAYMDIPVNSILLSMVRGTSYFEYDKMKYPLSFLKDKIVIIAQTQTGTETHNT
                     PVAKDLPDAQIKATIIDNYLNDSDITNKQKRPFLKHITPYKGTIITCIFCASIIFVML
                     IATDMTLAFINGSLIIFIYILLSIFLFCHPKFRIIIDMAMPLYWICSIFIISFVLKAH
                     HELKKKKKIETIFGNLVSQQVLKQLVTKPHRLNLKSSVQKVTVMSCNIYNNLKISDEL
                     SPEKYVELVNNVFNTIEKIIFKYNGTINRFVGNSVLVYWGYPIHSRKDSENAIRAALE
                     ILQKIDEYNASVHNINFEDYDEQNFEEKNPGKYFIKVKIAINTGDALIGQIGSSKVSD
                     FTVLGDTVDAVERLEDVAEEFDKDLIVTQNTLDQLDEEIPANYIGQIRLKNSTDKIKI
                     FELKLPQEENNNWDNEDNASY"
     gene            2100..>2635
                     /locus_tag="CPT85_05750"
     CDS             2100..>2635
                     /locus_tag="CPT85_05750"
                     /inference="COORDINATES: protein motif:HMM:PF05833.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22763.1"
                     /translation="MLHIDSLLLEAFYEENKDFCINARVQKIQQPTRREVILQMRNNG
                     ESKKLYININPSFHHLCFMNKENEAKRNIQIPKQPPMFCMLLRKHMEGARILKINKPE
                     FERIIELTFENYNEIGDRIEECLSIELMGKHSNIVLYNTDNNIILGCAHNIGEEKSKE
                     RELAGGLPYIYPPKQNKK"
     assembly_gap    2636..2686
                     /estimated_length=51
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <2687..3780
                     /locus_tag="CPT85_05755"
     CDS             <2687..3780
                     /locus_tag="CPT85_05755"
                     /inference="COORDINATES: protein motif:HMM:PF05833.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22764.1"
                     /translation="LKKAVADKYFSLSQITVQEICDAKNIDSNQTANSLSEQNLQILF
                     VELHEFLENKNRLYSVDKDYSKYSCINNLGNEYDNINNLIDDYFALNIEKNLVSNLKT
                     NLKAKINKELKKQTNTFNNQQKQIDKKEKAQMYMTKGNLLTANSYAVSAGQKSVTLTD
                     YETNTPVEIQLDETLSVIDNAKRYFALYNKTKKAYQVAQEMSEQTKEEIDYLNQLLFD
                     IDICDNFEELQEIAQEFEPPQKIDKKKKEENIKLTKEEIDGFTVYIGKNNKQNDYLYS
                     KISSGDDVWFHVLNTPGSHVIAKTGSSSQQLKDETVLKIAKLAKQYSTAKNSTKAAVV
                     YTLRKYIKRPNNTKSGFVVYKNETEIVVD"
     gene            complement(3781..4239)
                     /locus_tag="CPT85_05760"
     CDS             complement(3781..4239)
                     /locus_tag="CPT85_05760"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22765.1"
                     /translation="MGIDGFSMSNLGINRNMSSAQLANEAEATAKQALENQMADVDGV
                     GKKEKAGRKDPDAAFNGTIPFVGEPKEKEDEEESPSQENTNTPPNPDLIDDEDDEYGA
                     QFHFRFNQDNMIEVWDSEKQEIVKTISPEDATNAILGLSKMPSVFVNKEI"
     gene            4334..>4658
                     /locus_tag="CPT85_05765"
     CDS             4334..>4658
                     /locus_tag="CPT85_05765"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22766.1"
                     /translation="MAQNNLGVLIGTILDAPVWVQEVIFLDLKRHLETIHPGSTDPGR
                     EDEIYPSLVPEVSFKGKKELQNHDLNLDMNVYRYLDSALKGLRVIDITLNNFWTLEES
                     SSYLAQ"
BASE COUNT         1728 a          779 c          760 g         1340 t
ORIGIN      
        1 tactgctgta ttaattattt tactgtcatt atttgcttat tttttcaaag atttctttaa
       61 ttattttgaa aataagttta tagacgcacg cagttatctc agtgttgatg gcggaatatt
      121 ctcgcaaaaa tttaaaaagt ctgacagtga cattgttatc atttctgtta atgatttaac
      181 ccaatacgaa gcagcacggt cttccgaatt gaatctgaca cgctggccgt ggtctcgtgt
      241 tgtatgggca aaaatcatta actttattga agcacaaaag cctgctgttc ttatagttga
      301 tttaaatttt tcaaactacg aagacctttc aagaaactat acctctcctg atatggtttt
      361 ggctgacact atcggatatt acgacaacat tgttttgtca acagcattaa gaactccata
      421 taaagacact gacaaaatcg accctgccaa aattctggag aattttgaaa acccatacaa
      481 tcccgccagc aacactctaa acatgtacat agataacaaa cagctggaca agaatattgc
      541 atattattct cacaccccca ttccaaatat atttacaaac agcacaacaa tgggagtaac
      601 aaatcttgtc acagggaata acaaaaacga aaatatcaga tattcacagc ctgtatacaa
      661 acttatcaaa ggcaacaaag aatactacat cccctcactt gcacttgctg ctcttttaaa
      721 gaaagaaggg ataggaaaat tagctgaaga aatccctatt gaaaataata ttttaaaagt
      781 gggcaagcac agaataaggc tggacaacaa cggacaaact tttataaact ggcactcaca
      841 tgaaaatgcc tatatggata ttccagttaa ttcaatttta ttgagtatgg taagagggac
      901 atcttatttt gaatacgaca aaatgaaata tccgctcagc tttttaaaag acaaaatagt
      961 aatcatagca caaacacaaa cagggactga aacccacaac acacctgtag caaaagacct
     1021 gcctgacgcg cagataaaag caactattat tgataattat ttaaacgatt ctgacataac
     1081 aaacaaacaa aaaaggccgt ttttaaaaca cataactcct tataaaggca caatcataac
     1141 ctgcatattc tgtgcttcaa taatatttgt aatgctgatt gcaacagata tgacactggc
     1201 ttttatcaac ggttctttga ttatttttat ttatattttg ttgagcatat ttttgttctg
     1261 tcatccaaaa ttccgaataa taattgacat ggctatgccg ttatactgga tatgttctat
     1321 atttataatt tcatttgtac taaaagcaca tcatgaatta aaaaagaaaa agaaaattga
     1381 aaccatattc ggaaatttgg tatcacagca ggttttaaaa cagcttgtga caaaaccgca
     1441 ccgtcttaat ttaaaatcaa gcgtgcaaaa agttactgta atgtcttgca acatatacaa
     1501 caatcttaaa atttcagacg aattgtcacc tgaaaaatat gttgaacttg taaacaatgt
     1561 atttaatacg attgaaaaaa taatatttaa atataacggt actatcaaca gatttgtcgg
     1621 caattccgta cttgtatact ggggatatcc cattcactca cgcaaagaca gtgaaaatgc
     1681 tatccgtgca gctttagaaa ttctgcaaaa aatcgatgag tataatgcaa gcgtgcacaa
     1741 tatcaatttt gaagattatg acgagcagaa ctttgaagaa aaaaatccgg gtaaatattt
     1801 tatcaaagta aaaattgcaa taaatacagg agatgcactg atcggacaaa tcggctcctc
     1861 caaagtttct gacttcacgg tgcttggtga cacagttgat gccgttgaaa gactggaaga
     1921 tgttgcagaa gaatttgata aagatttgat tgtcacgcaa aacactcttg atcagttaga
     1981 tgaagaaata cccgcaaatt atataggtca aataagatta aagaattcca ctgacaaaat
     2041 aaaaatattt gagttaaaat tgcctcaaga agaaaataat aattgggaca acgaggataa
     2101 tgcttcatat tgattcactg cttcttgaag ctttttacga agaaaacaaa gatttttgta
     2161 taaacgcaag agtacaaaaa attcagcagc cgacaagacg cgaagttatt ttgcaaatga
     2221 gaaataacgg cgagtcaaaa aaattgtaca taaatatcaa tccaagtttt catcatcttt
     2281 gttttatgaa caaagaaaat gaagcaaaaa gaaatattca aatccccaaa cagccaccaa
     2341 tgttttgcat gctattaaga aaacacatgg aaggtgcaag gattttaaaa ataaacaagc
     2401 ctgaatttga aagaataatt gagcttacgt ttgaaaatta caatgaaata ggcgatagaa
     2461 ttgaagaatg tctgtctata gaattgatgg gaaaacacag taatattgta ctttacaata
     2521 cagacaataa tattattcta ggctgtgcgc acaatatagg agaagaaaaa agtaaagaaa
     2581 gagagcttgc cggaggactt ccttatattt atccgccaaa acaaaacaaa aaaaannnnn
     2641 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnncact aaaaaaagct
     2701 gttgcagaca aatatttttc gttatcacaa atcacagtac aggaaatttg tgacgcaaaa
     2761 aatatagact caaaccaaac agcaaattcg ttatccgaac aaaatttaca gattctgttt
     2821 gttgagctgc atgaattttt ggaaaataaa aacaggctgt attcagttga taaagattat
     2881 tccaaatatt cttgtataaa taatcttgga aatgaatatg acaacatcaa caatttaatt
     2941 gatgattatt ttgctttaaa tatagaaaaa aatcttgttt caaatttgaa aacaaatttg
     3001 aaagcaaaaa tcaataagga attaaaaaaa caaacaaata cttttaataa ccagcaaaag
     3061 cagattgata aaaaagaaaa agcacaaatg tatatgacca aaggcaacct tttaacagca
     3121 aattcatatg ccgtgtctgc gggacaaaaa tctgttactt taacagacta tgaaaccaac
     3181 acacctgttg aaatacaact ggatgaaacc ctttctgtta ttgacaatgc aaaaagatat
     3241 tttgcgctgt ataacaaaac aaaaaaagca tatcaagttg cacaggaaat gtcagaacaa
     3301 acaaaagagg aaatcgatta tctcaatcag cttttgtttg acattgatat ttgtgacaat
     3361 tttgaagagc tccaagaaat agcacaggag tttgagccgc cgcaaaaaat tgacaaaaag
     3421 aaaaaagaag aaaatatcaa acttacaaaa gaagagattg atggattcac tgtatatata
     3481 ggaaaaaaca acaagcaaaa tgactatttg tattcaaaaa tttcatccgg agatgatgtc
     3541 tggtttcacg ttttaaatac accgggctca cacgtaatag ccaagacagg aagctcttct
     3601 caacaattaa aagatgagac ggttttaaaa atagcaaaac ttgccaaaca atattcgact
     3661 gctaaaaact caacaaaagc agctgttgtt tatacattac gaaaatacat aaaacggcct
     3721 aacaacacaa aatcaggatt tgttgtttat aaaaatgaaa cagaaattgt tgtagattaa
     3781 ttaaatttct ttgttaacaa aaacgcttgg catttttgaa agaccgagta ttgcattagt
     3841 tgcatcttca ggagaaattg tttttactat ttcctgtttt tcagaatccc agacctcaat
     3901 catattgtct tggttgaagc gaaaatgaaa ttgagctccg tattcatcat cctcatcatc
     3961 tatcaaatca ggatttggag gagtgttagt gttttcttga gaggggcttt cctcttcatc
     4021 ttctttttct ttaggttcac caacaaaggg gatagtgccg ttaaaagcag catccgggtc
     4081 ttttcggccg gctttttctt ttttgcccac gccgtcaacg tctgccattt ggttttcaag
     4141 agcttgcttg gcagtggctt ctgcctcatt ggcaagctgc gcagaggaca tattcctgtt
     4201 tattcccaaa ttagacattg aaaacccgtc aatacccata gacacctctt cttaacattt
     4261 ttgatatata cttcgtacat gatattataa tacatgttag ggatattata aatagtggag
     4321 ttaattgagt tttatggcac aaaataacct gggtgttctt atagggacaa ttttggatgc
     4381 gcctgtttgg gtgcaggaag taatctttct tgatttaaaa agacatcttg aaacaattca
     4441 cccaggcagt actgatcccg gcagagaaga tgaaatatac ccttctcttg tgcctgaagt
     4501 ttcttttaaa ggaaaaaaag agcttcaaaa tcatgatttg aatcttgata tgaatgttta
     4561 cagatattta gacagtgcat taaaagggct cagggtaatt gatattacgt tgaataattt
     4621 ttggacactg gaagaatcct cttcatatct tgcacaat
//
LOCUS       DABS01000135            3599 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_16587, whole genome shotgun sequence.
ACCESSION   DABS01000135 DABS01000000
VERSION     DABS01000135.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3599)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3599)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3599
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     assembly_gap    252..253
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            331..648
                     /locus_tag="CPT85_05770"
     CDS             331..648
                     /locus_tag="CPT85_05770"
                     /inference="COORDINATES: protein motif:HMM:PF13202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22756.1"
                     /translation="MSNLTSKLAQNGLSYQELCQLCSSGMANSEMLSNVLTYFNQIDT
                     NKDGRVTNAEIQAFSLKADEEKLKTEYQSFKPSSMSVFYGDSESDSEPSSLIDNLYPQ
                     NNS"
     assembly_gap    784..794
                     /estimated_length=11
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1227..1688
                     /locus_tag="CPT85_05775"
     CDS             1227..1688
                     /locus_tag="CPT85_05775"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22753.1"
                     /translation="MMSMYVPSAGTSQKAEEKDYEYLLIQQELMAMGIVPSGDKATDK
                     LKLQTVKTMQEMMQAQSSSSSRQSIPFDDIMNTLNLTVTGDLDKDYDTTIDRLDYEID
                     MAYSDEEKEYYEALKDQVEDEYNSSKQNSISYFSGASQISSMNKYMLLGIY"
     gene            complement(1695..2831)
                     /locus_tag="CPT85_05780"
     CDS             complement(1695..2831)
                     /locus_tag="CPT85_05780"
                     /inference="COORDINATES: protein motif:HMM:PF13416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22754.1"
                     /translation="MRFSSWGSQTETALLIPLIKQFESENPDIKVEFIHIPQNYFQKL
                     HLLFASNLAPDVVFINNHYAPKYIKAGLLCDLSGYVNKNDYFDKALQGFTFENKIYAV
                     PRDVSNLVIYYNKDLFKQYGVPFPHNNWTMSDFLAAAKKLTRNDLKGIGYETDMIFVL
                     PYLFSNGGAILSEDGKTPEIDKKETLEALDNFSALANVYKVAPKKSETASRTTAQMFL
                     QKKIAMHLSGRWLVPKYRQEADFDWDIAPFPKGKNGSVVNIDASGYALSKASVHKKEA
                     IKFIEFISSKDSLNALSKSGLIVPARKDSAYSDMFLDKSQKPLHSRVFVDVIETGKVT
                     PVNENYQKITDYLKIALEPVYLGKRKAHEVITHKLLIDLCRYAY"
     gene            complement(2937..3587)
                     /locus_tag="CPT85_05785"
     CDS             complement(2937..3587)
                     /locus_tag="CPT85_05785"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22755.1"
                     /translation="MFFMSLAVKTFKNINNSVPGTDSSDADTQQRIGNIRIEPKSKKQ
                     EKKEQTIQQKTTQTQSVGPKAVKNTATVPVQKASVPVQKMQSSPVAAKKNNAEAATSV
                     MTPKKKLPRSANSSINKFFSSPVQKAQNPMLLNTSPLSSNKGLCLVQYNSKFSLIGYI
                     NDNIFMLNQFDNVNSSEIRSRLSDSTASRDRYIVRLGDYKALVEVTDTNMNLLLEL"
BASE COUNT         1139 a          672 c          653 g         1122 t
ORIGIN      
        1 atagggttta ctttttggca aaaaccatta aactgaacat gcataaaaat atgcaaaaca
       61 aggtatgtaa aattaaggag attcccctat gtcattaatg aacggtcagg cattgtttgc
      121 aaatgcactc agcggcttgc agagcactta ttcaatctta gccaaaaaca gctcaaactc
      181 atcaggtata accatagaag atttaacaaa cccgtcaact actgttttac aacagctagg
      241 tggcaatatg anntgacttt tgctcaattc ctttcttcca attttgcagc aattgacaaa
      301 gacggcgatg ggacaataag ctctgatgat atgtctaatt taaccagcaa attagcacaa
      361 aacgggcttt catatcagga attgtgccag ctctgctcaa gcggtatggc aaacagcgaa
      421 atgctgagca atgttttgac atattttaac cagattgaca caaacaaaga cggaagggtc
      481 accaacgcag aaattcaggc attcagcctc aaagcagacg aagaaaaatt aaaaacagaa
      541 tatcagtcat ttaaacccag ctccatgagc gtattctacg gtgacagtga atctgactca
      601 gagccttcca gcctcattga caacctttat ccgcaaaaca attcgtagat tataaaaaat
      661 cggagatatt ataaattaaa agccggctcg tatgaaccgg cttttttgta aactattttt
      721 ttacagagtc tttaataacg ataagattat tcattatttt catctgggtt gtcggcagca
      781 ccannnnnnn nnnntagaac ccgcttttaa aacaacctct tctcctctgt aagtaaaagt
      841 atagtcatcc tgtctatcag atctgattgt aattttgtcc attccttaac cgcctgtcta
      901 taaataacta ataatgcttg tttattataa caaaaaagta taaaatatta atactctata
      961 caggtattaa ttttgttcct acattattta ctatcgggag agtcgactcg aaagcattga
     1021 agtataccta ccgtaatttt acgccagtag gaaacggaaa ggccaaggca ctcacccacc
     1081 tgcgagactc gcaggtaaca aaatcgtact tgtatagggt tttatttttg tttaaaaatt
     1141 tcttaaaacg ggaattatca tgatagctca agtttatcaa agtgagtggc ggtgttcgta
     1201 tgtctatcag tcccatttca tcttctatga tgtctatgta tgtaccttct gcgggtacat
     1261 ctcaaaaggc tgaagaaaaa gactacgagt accttcttat ccagcaagaa cttatggcta
     1321 tggggattgt tccctcaggg gacaaagcaa cagacaaact taagcttcaa accgtcaaaa
     1381 caatgcagga aatgatgcag gcgcaaagtt catcatcctc gcggcaatcc attccttttg
     1441 atgacatcat gaacacacta aaccttactg taacaggaga tttagacaaa gactacgata
     1501 caaccattga caggctcgat tacgagattg atatggccta ttccgatgaa gaaaaagaat
     1561 actatgaagc cctgaaagac caggtagaag acgagtataa ctcgtctaaa caaaatagta
     1621 taagctactt ttccggtgca agccagattt cttccatgaa caaatatatg ctgcttggca
     1681 tttattaaaa aattctaata tgcgtatcta cataaatcta tcaagagctt atgagttatc
     1741 acctcatgag cttttctttt accaagataa acaggttcaa gagctatctt cagatagtcc
     1801 gtgatttttt gatagttttc atttacagga gtcaccttgc ctgtttctat aacatcaaca
     1861 aaaacccttg aatgaagtgg tttttgtgat ttatccaaaa acatgtcaga ataagcactg
     1921 tccttgcgcg caggcacaat cagaccgctt ttagaaagag catttaacga gtcttttgaa
     1981 gaaataaact ctataaattt tattgcttct tttttgtgca cagaagcttt tgacagtgca
     2041 taacccgatg catctatatt aacaacagag ccgtttttac cttttggaaa aggagctata
     2101 tcccagtcaa aatcagcttc ttgtctatat tttggcacaa gccatctgcc cgaaagatgc
     2161 atggcaatct ttttttgcaa aaacatctgc gcagtcgtac ggctggcagt ttcagacttt
     2221 ttaggcgcaa ctttataaac atttgccagc gcagaaaagt tatctaatgc ttcaagagtt
     2281 tcttttttat caatttccgg agttttgccg tcttcactca atattgcacc gccgttactg
     2341 aacaaatacg gcaatacaaa aatcatatca gtttcgtagc ctattccttt taaatcattt
     2401 ctcgtaagtt tttttgccgc agctagaaag tcgctcattg tccagttgtt atgagggaaa
     2461 ggcacgccgt attgtttaaa aaggtctttg ttataataaa tcacaaggtt ggatacatca
     2521 cgcggcactg cataaatctt gttttcgaat gtaaagccct gcagcgcttt atcaaaatag
     2581 tcgtttttat ttacataacc gctcaaatca caaagcagcc ctgcttttat gtactttggt
     2641 gcataatgat tattaataaa aacaacatcc ggagcgaggt ttgaagcaaa cagcagatgc
     2701 agtttttgaa aatagttttg cggtatatga ataaattcca cttttatatc aggattttca
     2761 gattcaaact gttttataag aggaattaaa agagcagtct ctgtttgaga accccatgat
     2821 gaaaatctta tggtagtttt agtatcatta tgtagatatc aaacctgcca caaagcagta
     2881 atgcatacaa gaattaagat aaaaaacaaa acaaattttt tcattgtttt attatattac
     2941 aattcgagaa gcaaattcat gtttgtatcg gtaacttcaa caagagcctt gtaatcgcca
     3001 agtcttacaa tatatctgtc tctggaagcg gtagaatcgg aaagtctgga gcgtatttcg
     3061 ctgctgttga cattgtcaaa ctgattaagc ataaaaatgt tatcgtttat gtaaccgatg
     3121 agagaaaatt tgctgttata ttgaacaaga caaagcccct tgttgcttga taagggtgaa
     3181 gtatttaata acattgggtt ttgtgctttt tgcacgggag aagaaaagaa tttgttgatg
     3241 gaagaattag cgctgcgcgg aagtttcttt tttggagtca taacagaagt tgcagcttct
     3301 gcattatttt tcttagccgc tacaggagaa gactgcattt tttgcacagg aacagaagct
     3361 ttttgcaccg gtactgttgc agtattttta acagcttttg ggccaacaga ttgtgtctgt
     3421 gttgtttttt gctgtattgt ttgttctttt ttctcttgtt tttttgattt aggttctatt
     3481 cttatattac cgattctctg ctgtgtatca gcatcagatg agtctgtgcc gggtacagag
     3541 ttgtttatat ttttaaaagt tttgacagcc agtgacataa aaaacatagg aaaaactat
//
LOCUS       DABS01000136            4864 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_17270, whole genome shotgun sequence.
ACCESSION   DABS01000136 DABS01000000
VERSION     DABS01000136.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4864)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4864)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4864
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..345)
                     /locus_tag="CPT85_05790"
     CDS             complement(<1..345)
                     /locus_tag="CPT85_05790"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22690.1"
                     /translation="MLVLHCXXTEGSDKALDIAQKALDVAKNPKISNYYFMVLYKKLI
                     AEIFLIKGDTDASKMYIEKALMIVKQYDMRILKVSLYQLYAKYLEEMVNKKPQNKDTY
                     AQNAMAVYKKALT"
     gene            complement(321..3245)
                     /locus_tag="CPT85_05795"
     CDS             complement(321..3245)
                     /locus_tag="CPT85_05795"
                     /inference="COORDINATES: protein motif:HMM:PF13191.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22691.1"
                     /translation="MRCLKCKKEIEDNLLRCSYCNTKVQAVCPVCGNINPITTEYCAR
                     CGLQLLKYCPECHCVNFPDASNCRKCGAAFEKNEESISITDLETQPPQEETKVTQEKI
                     ETQAFPETDTIREQAETFRDEDFAMEEVEDNELIDFSDGENIDETHNDADLLSLADNQ
                     ENSITQELKKENIEAKPIINADAAPAKVKTPVKEEEKPEPVITPENTEPDADIQSHDQ
                     MKSKNLIVNAVRKPEKLIIGLSAPEGYGKSTVLRYLFGDLMHQNYAWLWGECSANSQI
                     SPYGIFQEMILTFFNMPNFSNMSTEFLKQAKTMLSESLPFFTQEEIFNLFNFLYPSLT
                     AHFEDILINKDTTFALLEKLILEISKKAKLILVIDDFDMIDGASYAFLSYFVDQGHLG
                     ENIKLIISYKDNRITQGYFYSERLAQNQYKDIRLAKLSRVDADNLVKMFLNGSNPIPQ
                     NVFDEIFENSNGSSAYIEQVIVLLNEFKAFQSDGQTVTYHSTPVEERLPKSLQEILNV
                     RLNYIQKKFPLCFKTLCTAAIMGNKFNIKLLEIVMKLKEEEFQNVMQLLCNFAYIAPF
                     NNNIYEFKNTLLWKFVYERAKQSKEFVLLNEKIFDVINSFTLSSNALKALIAQSLNQK
                     ILALNIWTENVKLCAYLGDEHLWTLSQKQCLKIAQEITPENNDIIINNIHERLGKLLY
                     ESRPSEAIPFLSSAISNALKVSNRPKIIELSGYLSKSCALTGNYFGVIEAVDTVLKII
                     DTPQNKLETALVKHKKLKAMFSIGNAEEIYNLASSEIIPIVEQALSGLIPNNGISMDV
                     IYETWLECNLTVAMALISQGSNKSFAILKVIDEIVEKNSVQNRNYLQRLKLAKALAFS
                     VQGNIKKSEDVLVEFSQETAKEIVEPDVISLWNFTNILNKLYKQEWANIKEDLYSVVT
                     FANNYNDVLVKNLLKVFLGKILQEEGNLSKALDIFNEQVAVFAKEKIALGALLCWYYI
                     AX"
     assembly_gap    324..325
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3323..3517)
                     /locus_tag="CPT85_05800"
     CDS             complement(3323..3517)
                     /locus_tag="CPT85_05800"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22692.1"
                     /translation="MLQKIVDIVLVAQKNQPEKEYLKIFYLRYVKELKQKEIAEEVNL
                     SQSEVSKRLIEIAQIVKTHF"
     gene            complement(3526..3918)
                     /locus_tag="CPT85_05805"
     CDS             complement(3526..3918)
                     /locus_tag="CPT85_05805"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22693.1"
                     /translation="MDTLQQQRDLIEKLVKSNNKFTGNEDLLDDFCSETYKRSHSLFD
                     SLEIKDLESYIAKVANTAILAVLKDYGRVRRRENKYVSTQEILISPVPAKSKTQETAP
                     VPVVSQIVSSAAENFVXLTQAILLKKKL"
     assembly_gap    3562..3563
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4144..4860)
                     /locus_tag="CPT85_05810"
     CDS             complement(4144..4860)
                     /locus_tag="CPT85_05810"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22694.1"
                     /translation="MLALLSDSDTEDTEEQEETQSYKSQEFTQEPEQEYDQPSEFESE
                     EFEQPEFSVDTQESQPLEQDGDDTIHSLFENQANAQSEEGAQDGVAEFELAPEPVSAS
                     TVNKTKQIAVAAALVVLLAGAGAGAWFMNHQKATTEETPLDTANSDQLFDFQNQGTQS
                     EESPDTQSAAVSQDINRSMANSFSDKPAAISITKLSWQVSEKLASEASVKEYLQTAGK
                     NIQMNLQXXCCIQQHGQSLV"
     assembly_gap    4182..4184
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1350 a          966 c          839 g         1702 t
ORIGIN      
        1 agtaagcgct tttttgtaaa ctgccatagc attttgagca taggtgtctt tgttttgagg
       61 ctttttgttg accatctctt ccagatactt tgcatacagc tgatacaaag aaaccttcaa
      121 aattctcata tcatactgtt ttacaatcat caatgctttt tcaatgtaca tcttggatgc
      181 gtctgtgtct cctttgatta agaaaatctc agcaataagc tttttgtaca gcaccataaa
      241 atagtagttg gaaatctttg gattcttggc cacatccagc gccttttgcg caatatcaag
      301 cgccttgtcc gacccttctg tcannttgca atgtaatacc agcaaagcaa agcacccagt
      361 gcaatttttt cttttgcaaa aacagctacc tgctcattaa aaatatccaa cgccttggat
      421 aaattgcctt cctcctgcaa aatcttgccc agaaaaacct ttaacaggtt cttaacaaga
      481 acatcattgt aattgtttgc aaaagtcaca acagaataaa ggtcttcttt tatgttggcc
      541 cactcctgct tgtaaagctt gttcaatatg ttggtaaaat tccataatga aataacatct
      601 ggctcaacaa tctctttagc agtctcttgc gaaaattcca caagcacatc ctcagatttt
      661 ttgatattgc cctgtacact aaaagccaga gctttggcca atttgagcct ttgcaaatag
      721 ttgcggtttt gtacactgtt cttttcaaca atctcatcta ttacttttaa tattgcaaac
      781 gacttgttgc ttccctgcga aattaatgcc atagccacag tcaaattaca ctcaagccat
      841 gtctcgtaaa taacatccat tgagattccg ttgtttggaa taagcccaga aagcgcctgt
      901 tcaacaatag gaataatctc gctgcttgca aggttataaa tttcttctgc attgcctatg
      961 gaaaacattg ctttgagctt tttgtgtttt acaagcgctg tctcaagctt gttttgcggg
     1021 gtgtcgataa tttttaaaac agtatcaaca gcctcaatta caccaaaata attgcctgtg
     1081 agcgcacagc tctttgacaa ataacctgat aattcaataa tctttggcct gttgcttacc
     1141 ttgagcgcat tgcttattgc agaagataaa aacggaattg cctcagacgg ccgtgactcg
     1201 taaaggagct tgcccagtct ttcgtgtatg ttgtttatta ttatatcgtt gttttcgggc
     1261 gttatctcct gagcgatttt taaacactgc ttctgtgata aagtccataa atgctcgtca
     1321 ccaagatacg cacaaagctt tacgttttca gtccagatat ttaatgcaag aattttttgg
     1381 ttcaaactct gtgcaatcag tgccttcagt gcattactcg aaagtgtgaa agagtttatc
     1441 acatcaaata ttttttcgtt caacagtaca aattccttgc tctgctttgc tctttcgtaa
     1501 acaaatttcc atagcaaagt gtttttgaac tcgtaaatat tgttgttaaa tggtgcaatg
     1561 taagcaaaat tgcacaacag ctgcataacg ttctggaatt cttcttcctt gagcttcatc
     1621 acaatttcaa gcagctttat gttgaacttg ttgcccataa ttgcagcagt gcaaagtgtt
     1681 ttgaaacaca atggaaactt cttttgaatg tagttcaatc gtacgttcag aatttcctgc
     1741 aaacttttgg gtagacgttc ttcaacaggt gtggagtgat atgtcactgt ctgtccgtct
     1801 gattgaaaag ccttgaactc gtttaacaat acaatgacct gctcaatgta tgcactgctg
     1861 ccgtttgagt tttcaaaaat ttcatcaaat acattttgcg gtatcgggtt agacccgttt
     1921 aaaaacattt tgacaagatt gtctgcatcg actctgctca gctttgcaag cctgatgtct
     1981 ttatactggt tttgtgccag tctttcggaa tagaaataac cctgcgtaat tctgttgtct
     2041 ttgtaagaaa taatgagctt gatgttttca cccagatgac cctggtctac aaaatatgat
     2101 aaaaacgcat atgaagcacc gtctatcata tcaaaatcat caataacaag tataagcttg
     2161 gcctttttgg atatctcaag aataagtttt tctaaaagtg caaatgttgt gtctttgttg
     2221 ataagtatat cctcaaaatg cgctgtcaaa gacggataaa ggaagttaaa caaattgaaa
     2281 atttcttcct gcgtaaaaaa cggcaaactt tctgacaaca ttgtttttgc ctgttttaaa
     2341 aattccgtag acatgttgga aaaattcggc atattaaaaa atgtaagtat catttcttgg
     2401 aatataccat atggacttat ttgagaattt gcactgcact ctccccacaa ccatgcataa
     2461 ttctggtgca tcaaatcacc aaaaagatac cttaaaactg tggattttcc gtatccttcc
     2521 ggcgcactca aaccgataat aagcttttca ggttttctta ctgcattgac tatcagattt
     2581 ttacttttca tctggtcatg tgattgtatg tcagcatcag gctcggtatt ttccggtgta
     2641 ataacaggct caggtttctc ttcttcctta acaggtgttt tgacttttgc aggcgcagca
     2701 tctgcattta tgataggttt tgcttctatg ttttcttttt tcagctcctg tgtgatgctg
     2761 ttttcctgat tgtctgccag cgacaataaa tcagcatcat tgtgtgtttc atcaatattt
     2821 tctccgtcag aaaagtcaat cagctcgttg tcttcaactt cttccatagc aaaatcttca
     2881 tctctgaaag tctctgcttg ctctctgatt gtgtctgttt ccgggaaggc ttgtgtttct
     2941 attttttctt gtgttacttt tgtttcttct tgaggcggtt gtgtctccaa atcagtaatg
     3001 gatatagact cttcgttttt ttcaaaagca gcaccgcatt ttctgcaatt agaggcatca
     3061 ggaaaattta cacaatgaca ctcagggcag tattttaaga gctgcaaacc gcatcttgca
     3121 cagtattccg tagtgatggg gttaatgttt ccgcaaaccg gacatacggc ttgtactttt
     3181 gtgttgcaat aactgcatcg taaaaggtta tcttctattt cttttttgca ttttagacaa
     3241 cgcattatac ttttaataac cgcttagcta aactaagcat attatagtat aaagaatcgc
     3301 taaattacat cagacgttaa tattagaaat gtgtttttac tatttgtgca atctcaataa
     3361 gtcttttgct cacttctgat tgagataaat tcacctcttc agcaatttct ttttgcttta
     3421 gctctttaac gtatcttaag taaaagattt ttaaatactc tttttcaggc tgattttttt
     3481 gcgcaaccag aacaatatct acaatttttt gcagcaaatc ttttcttaca attttttctt
     3541 caaaagaatc gcttgggtca gnnatacaaa attttctgct gcagaagata caatttgtga
     3601 cacaacaggc acaggagctg tttcttgtgt tttggatttt gccggtacag ggctgattaa
     3661 aatttcctgc gtgctgacgt atttgttttc acgtcttctt actctgccgt agtcttttaa
     3721 caccgcaaga atagccgtgt tggccacctt ggcaatataa ctttcaaggt cttttatctc
     3781 aagactgtca aacagagaat gggatctttt gtatgtttca gaacaaaaat catccagcag
     3841 atcctcattt cccgtaaatt tattattaga ttttactaac ttctcaataa gatctctttg
     3901 ttgttgtaaa gtatccaatt ctttaatcca atatattcat ttaaccgatt gattatatca
     3961 tatcatataa attaaaaatt tatgattaaa gttaagaaat aatctgattt gtaatccttc
     4021 aatttaggca cgttgatata ctttaaggtg tttttaatac ttcttaatat aatatcatca
     4081 atcttgtcag aaccgctgga agtcaagacc tgtatgcctt ttaaggtgtt gtcaggtgct
     4141 atttcaaacg agactttgac cgtgttgttg aatgcaacat cnnntttgta aattcatttg
     4201 aatatttttt cctgcagttt gtaaatattc tttaacagaa gcttcactcg ctaatttttc
     4261 actaacctgc catgaaagtt ttgtgataga aatagcagcc ggcttgtcag agaatgaatt
     4321 agccattgaa cgattaatat cttgtgatac agcagcagat tgtgtatcag gcgattcttc
     4381 tgattgtgta ccctggtttt ggaaatcgaa caactgatca gaattagctg tatcaagcgg
     4441 tgtctcttca gttgttgcct tttgatggtt cataaaccac gcaccggcac ctgctccggc
     4501 aagtaataca acaagtgctg ctgcaaccgc aatttgtttt gttttattta ctgtagaagc
     4561 gctaacaggt tcaggtgcaa gctcaaattc cgcaactccg tcttgtgcac cttcttcgct
     4621 ctgtgcattc gcctgatttt caaataatga gtgaattgta tcatcaccat cttgctcaag
     4681 cggttgggat tcttgagtgt caacagaaaa ctcgggttgt tcaaattctt cagattcaaa
     4741 ctctgaaggc tggtcatatt cctgctcagg ttcttgtgta aattcttgtg atttgtaact
     4801 ttgcgtttct tcctgctctt cagtatcctc tgtatcagaa tcagaaagca atgcaagcaa
     4861 atca
//
LOCUS       DABS01000137           26348 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_4702, whole genome shotgun sequence.
ACCESSION   DABS01000137 DABS01000000
VERSION     DABS01000137.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 26348)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 26348)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26348
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     assembly_gap    208..214
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            300..1256
                     /locus_tag="CPT85_05815"
     CDS             300..1256
                     /locus_tag="CPT85_05815"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22639.1"
                     /translation="MLATMDGIERGGFAASFVAQDFLGMAAPRTIKGLSRNSDATGKK
                     NTAYATSVAIREILSGPSLFIIPSAILWGAAKFFGPANRVKFDYIKGIGDQFNDFAKG
                     KSAESLGQTEAVKKDFYKEAFKNMLNTSLDNKVVDIDAKAQHFADAAMEIEKAKSKGF
                     IKNLLGKPVAGSKEDLTGALMDEYVKLKKQYMPVSDNIVGMSFKTKEGTLGTSLGKFI
                     DDLKNYTNDITGTMAKKAKKGFKGSVEEAISKFNFSRAGSRFVTTTLMTLGVFSFFTI
                     IPKLYKSTCKTNPALQGLEGPADANKPAETEKKDGGVENENK"
     gene            1243..2187
                     /locus_tag="CPT85_05820"
     CDS             1243..2187
                     /locus_tag="CPT85_05820"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22640.1"
                     /translation="MKINNNATPLKKQPSFGNAALGKKMFSSNTFNKIAKNLEYDNFT
                     MSFPVTLGLLYGATVLPRYIQAYDKHDRREILTRDLTSITAILFLAASLRKGFSKLSS
                     KATGFALNLKPKNHKGVKKYIDYINPRGGVQVMNKEQIIAKYSDLEANKNGFVDFAEF
                     IRSQGGKLNKVLASNKNTKAEFEKMLGKDLKSSTHQEILDAWKNASKESKDKVYAEFK
                     NPDNSFTKKARVHNNVFNAVSTFLMVPLFMIWLEEFNEKTTKRLKAKENEELANTMKA
                     KEAQKAKSGFDTMKVSSYHSTDARQSFKNFFNMVNKDN"
     gene            complement(2392..2700)
                     /locus_tag="CPT85_05825"
     CDS             complement(2392..2700)
                     /locus_tag="CPT85_05825"
                     /inference="COORDINATES: protein motif:HMM:PF01381.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22641.1"
                     /translation="MSELIKLISSTVKYLRKQKGLSQAKLAEISGVHEKTVISVESGR
                     HSITIDVIEKLSKAFGLEAYELLLPAKTTVNKHMRLDVKQEIKNIQNTLNRILDCVDE
                     "
     gene            2819..3304
                     /locus_tag="CPT85_05830"
     CDS             2819..3304
                     /locus_tag="CPT85_05830"
                     /inference="COORDINATES: protein motif:HMM:PF00565.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22642.1"
                     /translation="MTKNSDIIKTLLIFICITASAAYAANPNYMIKPKIISAPDGDTI
                     KIWTKERPVSVRLTGIDCYETSVNGHIQYQRNKGLTDEQIIEKGLKAKDELIKILRSN
                     KNIYLEITGIDRKWGRYVGIFYYKDSKGRYISINDKMLKTGYCPRYIFKPYDEYIKYK
                     H"
     gene            complement(3309..3551)
                     /locus_tag="CPT85_05835"
     CDS             complement(3309..3551)
                     /locus_tag="CPT85_05835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003450122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22643.1"
                     /translation="MTTIIGIKISNRLESAVSVQEILTKYGCIIKTRIGLHEEINGQC
                     SPRGLILLEIINDEESIKIANELCDIEEIEIQQMKF"
     gene            complement(3775..4080)
                     /locus_tag="CPT85_05840"
     CDS             complement(3775..4080)
                     /locus_tag="CPT85_05840"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22644.1"
                     /translation="MFNLKNLKIVKKLSSIKPRLKWLMFSQMQDYKVNSKYIDMICSD
                     SDVKTANDRLEDMVRASLIREFSPEIQNMKSYEFLVDAVVHNLKKKQLASLEAEIDE"
     gene            4626..5741
                     /locus_tag="CPT85_05845"
     CDS             4626..5741
                     /locus_tag="CPT85_05845"
                     /inference="COORDINATES: protein motif:HMM:TIGR01420"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pili twitching motility protein PilT"
                     /protein_id="DAB22645.1"
                     /translation="MEENTLDNTDNIFDINAFLRKAVEEGVSDVHLRIDEVPVVRKDG
                     KIIKTNFPQITXVLNVVLPKYLRTKVQAAFDLDFSYEIKGLSRFRINLARQMGNTSLV
                     FRIIPYEIPTFEQLHLPPALNMFSKFHSGIVLVTGPTGSGKSTTIASLIDLINKNERK
                     HIITIEDPIEFIYSNKNCIITQRQVEIDTLSFPDGVKYALRQDPDVILIGEIRDIETL
                     SSAMKAAETGHLVIASLHTNDAIQTVSRIVGMYEPQDRANVRKQLAETLKACVAQKLL
                     PLKSGHGRIPACEIMVVTPTIKDFIIKDELEQIYDLVKKGSYNDMITMNMSLLQLIKE
                     DLITKDTALDVSDNKVEIQQMLRGAYHGTTESFDIQF"
     assembly_gap    4791..4792
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5757..6518
                     /locus_tag="CPT85_05850"
     CDS             5757..6518
                     /locus_tag="CPT85_05850"
                     /inference="COORDINATES: protein motif:HMM:PRK00085.2-1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="DAB22646.1"
                     /translation="MQNFTTNAINLKSYNLSETDKIIVMYSKDKGIIKGVAKGAKKTT
                     SKLGGRMDMLVANRLMLHKGRNLDTICQAQAINTFKNTRNDMDKLFYSIYCSEVVHSF
                     GVENDPNSEEIYELFYKTLEAVSKSENKVQLLLSVIKFQLKITHIAGYSLELEACACC
                     GGTLDNDNIYFSAQSGGTICEECKKHSINAAKLHHKIRDFLNTLLQLDYDSKTRYDEL
                     ATEKICSFCFELMKRHVEQFSPKKIKSAQILEITK"
     gene            6529..7179
                     /gene="deoC"
                     /locus_tag="CPT85_05855"
     CDS             6529..7179
                     /gene="deoC"
                     /locus_tag="CPT85_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018658708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="DAB22647.1"
                     /translation="MSELSKYIEHTLLKQDAKKEELEKLFEEAKQYGFLGVCINPCNV
                     KFAKENLKNSDVKIVTVVGFPLGANLSEVKAFETELAIKDGADEIDMVINVSKLKDRD
                     YDFVQKDIEAVKKACGNVPLKVILETDLLTCEEIKKACELCVAAGADFVKTSTGFVKN
                     GVGAKAEDVELMAAVVKPHRLGVKASAGIRDKEKALAMVKAGADRLGTSSGVAIVS"
     gene            7256..7843
                     /locus_tag="CPT85_05860"
     CDS             7256..7843
                     /locus_tag="CPT85_05860"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01225.23,HMM:PF08245.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22648.1"
                     /translation="MQIVVCNGVEFMKFTYDEIVKATGATVLQCASTAGNLTVSTDSR
                     NINDGNFYIPLKGEKFDGHDFIKDAVDKGVRGYFTSDKTLIFPKAKFILYVEDTLIAY
                     LKLALYYKEKINPVTIAITGSSGKTTTKEMMASVMSKGYKIHKSPLNHNNEVGLCQTL
                     LSMPADTEVLILEMGMRGLGEIEXXXLLQTQEPLI"
     gene            7723..8598
                     /locus_tag="CPT85_05865"
     CDS             7723..8598
                     /locus_tag="CPT85_05865"
                     /inference="COORDINATES: protein motif:HMM:PF08245.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22649.1"
                     /translation="MPDIAVYACGYGSVDTRDGNARAWRNRAXXVIANTGTAHIGRLG
                     SVKNIAKAKCEISKYLHEEGLLIAHDTELIRKTNTYQGQTIYVGLDSPELKNVKLHPA
                     SSEFDYKNHHYKLNVEGEHNIQNSLFVINSALKLGLNPEKIAAGLENYKPIEKRWQLS
                     HIAGYTVVDDSYNSNPDSLRAAIDTFLSTQDKHGPERWLVLGDMKELGKGERNYHKEI
                     GEFIDKYVNVKLITVGTLARYIAQNSKHISKSFPNNKGVAAFIKSHASEGCAILFKAS
                     RSMKFEEIIKELEKL"
     assembly_gap    7806..7812
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8595..9560
                     /locus_tag="CPT85_05870"
     CDS             8595..9560
                     /locus_tag="CPT85_05870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009170250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="DAB22650.1"
                     /translation="MILSIVAALVAFVLALLLGVPYIDFLKKKMLGQYIRDEAPESYA
                     KKGGTPTTGGVFLVTAAVLSAVVSLFMAEKTSTGAFLLLITFIFYMFAGFQDDAQKFA
                     HHENKGLSARGKLILQIAIACLPVMFVTIGGRTFLTFGEYTLNLGYLYPIFGIFLITG
                     VSNAVNLTDGLDGLAASNMVISTAALTIINLIMGNVDIAIICAAVMGACLGFLYFNKH
                     PAKVFMGDTGSLALGGVLGTIAVMGKFELWLIPIGIIYLTETLSVMLQVTSFKLTGKR
                     IFKMSPIHHHFELCGWNETKIVKVFTLINFIFCTGAVALFWYLNR"
     gene            9578..10936
                     /gene="murD"
                     /locus_tag="CPT85_05875"
     CDS             9578..10936
                     /gene="murD"
                     /locus_tag="CPT85_05875"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="DAB22651.1"
                     /translation="MIRKWFDKKVLILGLSKSGMAAAKYLNSKGADCYITEQKPLKQE
                     DCKTVKELNELGIKTEFEHHSDEFMQDVYLAVTSPGIPPRSELMLKLKEKNIDVISEV
                     ELAYLETQVPFVAITGTNGKTTTTELTNFILNKEFKAQKCGNIGIPPCSLLDDAKKTD
                     FYVCEVSSFQLHYSRSFRPQIAVWMNFTPDHIDWHGGLENYFKDKASLFSPSKRPGFA
                     VFNAQDERLLAFGKEYAGEKFFFGAEFETNCSYIKDGAIFYKRAKGSEEKIIDLKDIP
                     LVGNHNYQNVMASIICAKIAGVPSEKITEAIKEFKAPEHRCEFVANIQGKDVYNDSKA
                     TNPEAAIVAIQSFEGRSVTLIAGGTDKNTDLTEFCEAVKKYINHVILLGLAKDRFEAE
                     LRKNGYENITIAGSFQDGVDKAFEMDDEVILLSPACSSYDMFTGYEQRGRVFKDYALS
                     KK"
     gene            10869..12143
                     /locus_tag="CPT85_05880"
     CDS             10869..12143
                     /locus_tag="CPT85_05880"
                     /inference="COORDINATES: protein motif:HMM:PF01098.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage V sporulation protein E"
                     /protein_id="DAB22652.1"
                     /translation="MICLRVMNNGEEYLKTMPYQRNNRQNKRHSGRRNYGYENEGRGG
                     VPSDVVLSPPDTTLMVVVAFLVVIGLMAIFSAGAPKAMDMGQNPASFALKQFAYLIVG
                     FFGLKYFMNLDYKKLRDWAVPFAWFVIAMLALVDFTPLGVIVNGARRWIMLGPIQFQP
                     SEMTKFAVIMLLANAFYRDANIFSSTKWSRYFVPILIMVFLVFKQPNLSMVILLLITS
                     MVMYLSVAGSVKYMVTIGLAGIASAVGTIILFGKKLLHGYQMQRIQIWLNPNMDPYGA
                     GYNIIQSLLAFAAGGFWGVGYGNSKQKLAWLPEGHTDFIFAVIAEELGFLGCFLVIGL
                     FWTFIHRGIIISSRANDMFGKLLAVGITLSIGLQAFINMSVSSSLIPATGVPLPXSYG
                     GTSLIVSLCMVGVLLNISKKRIKRIRNYERNY"
     assembly_gap    12034..12035
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            12127..12312
                     /locus_tag="CPT85_05885"
     CDS             12127..12312
                     /locus_tag="CPT85_05885"
                     /inference="COORDINATES: protein motif:HMM:PF03033.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22663.1"
                     /translation="MSETTNNNKKTYFVTGGGTGGHIYPAVAVGMALQKEADTNKVFY
                     VGXKRKLQKTKCLIFSG"
     assembly_gap    12266..12267
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            12291..13244
                     /locus_tag="CPT85_05890"
     CDS             12291..13244
                     /locus_tag="CPT85_05890"
                     /inference="COORDINATES: protein motif:HMM:PF03033.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22653.1"
                     /translation="MFDFLGVNITGMPKTCSFDFLKWSFKLLFATVKSMGYIVKYRPN
                     LIFGTGGYVSAPMLFAGILTNTPVVIHECDAVAGKVTKLIAPFAKSVSCAFESATENI
                     KSNNLHVNGNPVREEFLSIDRYHARQKWNLKDKLTIMVMGGSQGAKKINSVLVQCLKK
                     IFKKYDVQIIHQTGLKNYDETVKELKKVFPVYTENSQYIVRPYFKKMYLPMIASDIAV
                     SRAGSLSISEICVSGLASILIPYPYAAADHQRKNAKEMEELGASLYLDDADCTPEAFM
                     EKLEEVINNTQKMIELQNNAKKLVKYDATKNIVEQIKAVVK"
     gene            13339..13743
                     /locus_tag="CPT85_05895"
     CDS             13339..13743
                     /locus_tag="CPT85_05895"
                     /inference="COORDINATES: protein motif:HMM:PF04977.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22654.1"
                     /translation="MNKLDKRPDLIEKTQEKNNKRKNKIRFYYSFLTIVLLICLVQIG
                     ISAFNNITKSISYHGKIKKMKALNQQAYAENQRLKEELEDFSSLKSLEAIARNNLKMA
                     GEDEVLVIINKPQAPPVETKKKKGLKKISDKK"
     assembly_gap    14038..14061
                     /estimated_length=24
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            14265..16244
                     /locus_tag="CPT85_05900"
     CDS             14265..16244
                     /locus_tag="CPT85_05900"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015947079.1"
                     /note="Catalyzes the reduction of nucleoside
                     5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside triphosphate reductase"
                     /protein_id="DAB22664.1"
                     /translation="MLVWYVLLRDKEIFMGFSQTNTXXGVVKLTQVSSPVGNPYSSKT
                     AQVKDLFIDKNVKLVDDYLKQLDWQVKENSNMTYSVQGLNNYISSAISKNYWLNKIYT
                     PEIKYAHENGDIHIHDLNLISTYCVGWDLKDLLMEGFTGVDGKIKCAPAKHFRTALGQ
                     IVNFLYTMQGEAAGAQAFSNFDTLLAPFVKYDKLEYAQVKQAMQEFVFNLNVPTRTGF
                     QTPFTNITMDMTVPSYYADHPVIIGGELMEDTYKEFQHEMNLINKAYFEIMMQGDCTG
                     KVFTFPIPTYNVTKDFDWDNPELEGLWEMTAKYGIPYFSNFINSDMNPEDARSMCCRL
                     RIDNRELEYRGGGLFGSNPLTGSVGVVTINLPRIGYLAKNEAEFFRMLCRNMELARES
                     LEIKRKVIEDYTDKNLYPYTKFYLRDIKARHGSYWKNHFSTIGLVGMNEACENLTSKN
                     IGTDEGREFALKVMDYMRNMISNFQKETGNNYNLEATPAEGTTYRLARLDKQKFDAIK
                     CANQHEYENGAKPFYTNSTQLPVNYTDDIFELLDKQDELQTKYTGGTVVHIFAGERVY
                     DTKVVKNLVKKVCENYKLPYFTFSPTFSICPEHGYVAGEHFTCPDCGSACEVFSRVVG
                     YISPVNQWNEGKKEEFAMRKTFDSCCCENRGEKCS"
     assembly_gap    14333..14334
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            16235..16924
                     /locus_tag="CPT85_05905"
     CDS             16235..16924
                     /locus_tag="CPT85_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012543843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="DAB22655.1"
                     /translation="MLIAGLQKSSLLDYPEKIAAVVFTCGCNFRCDYCHNPDILTDFR
                     SDAACDEQHVLDFLNSRKGKLDAVVVSGGEPTLQKDLPEFFKKIKSRGFLTKLDTNGT
                     NPDVVKKLVHKGLVDYIAMDIKAPVEKYHLITNTCTDIEKIKESIDFIMNCGVDYEFR
                     TTVVKSSLEEKDLENIGKTIKGAKRYYLQKFVATKTLNPAFAFETTYSTQEFEHIKSL
                     LLPCVKEVFVR"
     assembly_gap    16983..17002
                     /estimated_length=20
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            17003..17248
                     /locus_tag="CPT85_05910"
                     /pseudo
     CDS             17003..17248
                     /locus_tag="CPT85_05910"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            17202..17486
                     /locus_tag="CPT85_05915"
                     /pseudo
     CDS             17202..17486
                     /locus_tag="CPT85_05915"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    17220..17242
                     /estimated_length=23
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    17463..17464
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            17653..18681
                     /gene="trpS"
                     /locus_tag="CPT85_05920"
     CDS             17653..18681
                     /gene="trpS"
                     /locus_tag="CPT85_05920"
                     /inference="COORDINATES: protein motif:HMM:TIGR00233"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="DAB22656.1"
                     /translation="MKMENSKKGRIVTGMRPTGKLHLGHYLGVLKNMVKLQNEYECFF
                     FVADWHALTTKFDCTQDLIQNTKDVVLDWLAAGIDPEKAHIYIQSHLPQTAELHIYLS
                     MITPQNWVERDPTLKDLVKMIRSENDDSKPNVSYGFLGYPVLMSADILTFNVDYVPVG
                     IDQVAHIEITRDIARRFNNIYKTELFKEAKPMLTNIPMLKGVDGQKMGKSFHNDIKIS
                     DDEETTSKTIMKAITDRSRARRDDPGHPDKCEVAFEYWKAFATEEKVKQVECECIAGK
                     RGCADCKRELGCVINEQLKEIRERRKYYENHPEIVEAIIKKGDEKAREEAEKVLKKIR
                     KAVGMYQN"
     gene            18699..19914
                     /gene="coaBC"
                     /locus_tag="CPT85_05925"
                     /pseudo
     CDS             18699..19914
                     /gene="coaBC"
                     /locus_tag="CPT85_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012674139.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
     assembly_gap    18871..18872
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            19893..20636
                     /locus_tag="CPT85_05930"
     CDS             19893..20636
                     /locus_tag="CPT85_05930"
                     /inference="COORDINATES: protein motif:HMM:TIGR00486"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="DAB22657.1"
                     /translation="MAKTSEIIKILEEYAPPELAESWDNSGWQVFFGNDNTSKVLLCL
                     SVTDEVINQAVELGCNLIVSHHPVIFKPLKVIKDVKIIKTIQRGIQIYSLHTNCDKTN
                     RGTSDLIAQKLNLKKTAVLNDFVRVGLAPYEMTLDELVSFVKLAFNVERIKLVNNARK
                     TMIKTIAVCAGAGADFIQEVEKYNIDAYVTSEVKYHDALDSRRAVILDVGHFESEKPF
                     VEEIKNLLENKKHRIEVVVAKEKPAWEYV"
     assembly_gap    20864..20866
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            20870..21187
                     /locus_tag="CPT85_05935"
     CDS             20870..21187
                     /locus_tag="CPT85_05935"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22658.1"
                     /translation="MSNLLAGAASRNNTFRSRILKDRPEDSVAIWCVEKTPAMAAQCE
                     ILRVTSSYEGIVSIHYVNKNPAYFTKYLQEDWLKIIRDVRIYYSYFRWDRVTGKETSV
                     QLQ"
     gene            21234..22094
                     /locus_tag="CPT85_05940"
     CDS             21234..22094
                     /locus_tag="CPT85_05940"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22659.1"
                     /translation="MMSYLGTIIGNITKSKLSALSKESAERIKSVEEENAFHSKTLEE
                     LFTEKYDYKGSEPDTIYVKNLLTGEPEAVKVDIEIKPDANFNFAQETYRLLDKEGHEA
                     GKKNFSYRKMPGGKYVMYSGQMDNFSKIYGGVGIRLDQMHIERALQLGVDSIPRESLA
                     KATLYHTKMGFVPIEKKLVQLKSINQVKNFTEEEFCYKAKSIPLNEFEPVIVQKGRKF
                     YIDVNKTQTLTNLKMCKRQIEKTGFRRILYLDSTYTNLTLSGQELLRWKQIIKGHEIL
                     PKLSFILPKF"
     gene            complement(22091..23133)
                     /locus_tag="CPT85_05945"
                     /pseudo
     CDS             complement(22091..23133)
                     /locus_tag="CPT85_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003248925.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
     assembly_gap    22739..22740
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            23262..23997
                     /gene="kdsB"
                     /locus_tag="CPT85_05950"
                     /pseudo
     CDS             23262..23997
                     /gene="kdsB"
                     /locus_tag="CPT85_05950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018248154.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     assembly_gap    23688..23689
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            24035..24541
                     /locus_tag="CPT85_05955"
                     /pseudo
     CDS             24035..24541
                     /locus_tag="CPT85_05955"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            24451..24738
                     /locus_tag="CPT85_05960"
                     /pseudo
     CDS             24451..24738
                     /locus_tag="CPT85_05960"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    24476..24494
                     /estimated_length=19
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    24709..24717
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            24822..25007
                     /locus_tag="CPT85_05965"
     CDS             24822..25007
                     /locus_tag="CPT85_05965"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22660.1"
                     /translation="MNSATRCENILQLDKQFNWTFASKLMNFAFMDNIEKAKNSLPAR
                     ILPSRILQFLPDLLVNH"
     gene            complement(24997..25755)
                     /locus_tag="CPT85_05970"
     CDS             complement(24997..25755)
                     /locus_tag="CPT85_05970"
                     /inference="COORDINATES: protein motif:HMM:PF00072.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22661.1"
                     /translation="MINSALDENDFLGELTDGEFLVLTNPLKAEHIASFLVYAFEAIV
                     DKFYSEEDAKSGYIILHGDDNAGKRISLVSTSIGIISSEFQTYTSVNAALNALFATGK
                     LARLNTKSSYVVERAKISADNAVLNRDYNNKILILEPDEALNYLLKTTGEMQGYQVAS
                     AQDYDIAMNLVKTFDPALIVLDAGEVDTLKGLELCRKLKKDEKYKGIKIVLSTIVHDK
                     KMALNAGADLYLPKPYELLGIFGWIERLVKEFND"
     gene            complement(25719..26312)
                     /locus_tag="CPT85_05975"
     CDS             complement(25719..26312)
                     /locus_tag="CPT85_05975"
                     /inference="COORDINATES: protein motif:HMM:PF00072.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22662.1"
                     /translation="MLSKLVLILDKRKELPAKYKKIIETNGVSVLCASSFETGLEILT
                     EYEPDMVIVSDSLDMQPADAVKRLRMMSYPSRPCIVALSKSAELQDKLDVLDAGADDF
                     LSEPIESDEFKARINAHLRRHFESMISEVTQLPDAKSALKILKRTIAQNKKWAAMLVK
                     INEFEAYKEIYGELASDKMLQTYXPPLSIPHWTKMTF"
     assembly_gap    25761..25762
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         8483 a         4986 c         5272 g         7477 t
ORIGIN      
        1 tacaatatta gtagttatgg gggcatattt taactgctac gttcttaaca atacttaata
       61 aaagtcaaaa aaataagtgt aaagggtaca catatttgta aaattatgtt aaaattctcg
      121 ttacaattag caatttctta gtgtgacttg cattgtaaaa tatgtaggct tcggtaggga
      181 agaaatgaag ttaaattcaa tagacaannn nnnntaaaaa taatcataat gccgaaaata
      241 ataaaagtta cgccaattca caacgaaaca acgtagcgtt cggctcggcg gcagatataa
      301 tgctcgcaac aatggacgga attgaaagag gcggttttgc agcatctttc gttgctcagg
      361 attttttggg catggcagct ccccgtacaa ttaaaggttt atcaagaaac agcgatgcaa
      421 caggcaaaaa gaacacagcc tacgcaacaa gtgttgcaat cagagagata ttaagcggcc
      481 ccagcctgtt tatcatccct tctgctattt tgtggggcgc ggcaaaattt ttcggccctg
      541 ccaacagagt caaatttgat tacataaaag gtatcggcga ccagttcaat gattttgcaa
      601 aaggcaaatc agcagaaagc ctcggccaga cagaagctgt taaaaaagat ttctataaag
      661 aagctttcaa aaacatgctc aatacatctt tggataacaa agttgttgat attgacgcaa
      721 aagcgcagca ctttgcagac gctgcaatgg aaattgaaaa ggcaaaatca aaaggattta
      781 tcaaaaacct cctcggtaag ccagttgcag gctctaagga agatttgaca ggcgcattga
      841 tggatgagta tgtaaagctc aaaaaacagt atatgcctgt atctgacaat attgtaggta
      901 tgtcattcaa gactaaagag ggcacattgg gcacatcttt aggcaagttt attgacgatt
      961 tgaaaaacta cacaaatgac ataacaggca caatggctaa gaaagccaaa aaaggattta
     1021 agggctctgt tgaagaggca atttcaaaat tcaacttctc acgtgcgggt tcaagatttg
     1081 ttaccacaac attgatgaca ttgggtgtgt tctcattctt cacaattatt ccgaagctct
     1141 acaagagcac atgcaaaaca aaccctgcgc tccagggtct tgaaggcccc gcagatgcca
     1201 ataaacctgc agagactgaa aagaaagacg gaggtgttga aaatgaaaat aaataacaac
     1261 gcaactcctc ttaaaaaaca gccttctttt ggcaatgcag cactgggcaa aaaaatgttc
     1321 agctcaaaca cgtttaacaa aattgcaaaa aatctcgagt atgacaattt cacaatgtca
     1381 ttccctgtta cactgggtct tttgtacggt gcaacagtat tgcccagata cattcaggca
     1441 tatgacaaac atgacagacg cgaaattttg acaagagact taacaagtat cacagcaatc
     1501 ttgttcttgg cagcaagctt gagaaaaggt ttttcaaaat tgagctccaa ggcaacagga
     1561 tttgctctca acttgaaacc gaaaaaccat aagggcgtta aaaaatacat tgactacatc
     1621 aaccccagag gcggtgtaca ggtaatgaac aaggaacaaa tcattgccaa gtattctgac
     1681 cttgaggcta acaaaaacgg atttgttgat tttgccgaat ttatcagaag ccagggcgga
     1741 aaactcaaca aagtattggc ttctaacaaa aatacaaaag cagaatttga aaaaatgctt
     1801 ggcaaagacc tcaagtcttc tactcatcaa gaaattttgg atgcatggaa aaatgcttct
     1861 aaagaaagca aagacaaggt ttatgcagag ttcaaaaacc ctgataacag cttcactaaa
     1921 aaggcaagag tacacaataa cgtgtttaat gctgtatcaa cattcttgat ggtgcctttg
     1981 tttatgatat ggctcgaaga gtttaacgaa aagacaacaa aacgcctcaa agctaaagaa
     2041 aacgaagagc ttgcaaacac tatgaaggca aaagaagcac aaaaagcaaa gagcggtttt
     2101 gatactatga aagttagcag ctatcattcc accgatgccc gccaatcttt caaaaacttc
     2161 tttaacatgg ttaataaaga taattaatta tttattttgc tttggtgata acaagagtct
     2221 gtttattcat ttttattgaa acagagtctt tctcgggctt aacttccagc agttcaagta
     2281 tagtgttaag aatataaaac aacttttgat tcttttggat ttactcccat caattttatt
     2341 atgtggacag gcatgtaaac agaccatcca ttgccaatag gtactagttt tttattcatc
     2401 aacgcagtcc agtattctat tgagtgtgtt ttggatattt ttgatttcct gtttaacatc
     2461 taaacgcata tgtttattta cagttgtttt agcaggtaac agcagttcat atgcttcgag
     2521 cccgaatgct ttgcttaatt tttcaattac atcaatagta atggagtgtc tgcctgattc
     2581 tacactaata actgtttttt catgcacccc tgaaatttca gctaatttag cctgactcag
     2641 acctttttgt tttcttaaat atttaacagt tgatgaaatt agttttatta actctgacat
     2701 aattaattat gatagtgtac ttaattattt aacactatgc atatgtatat catatacgga
     2761 tagttgacta tcttttaaaa atgtggttta ctacctgtat aacgactagt gatgagatat
     2821 gacaaaaaat tctgacatta ttaaaacttt attaattttt atctgtataa ccgcaagtgc
     2881 tgcctacgca gcaaacccaa actacatgat aaaacccaaa atcatctctg ctccagacgg
     2941 agatacaatc aaaatttgga caaaagaacg ccccgtaagc gtccgattga ctggcataga
     3001 ctgctacgaa acatcagtaa acggacatat acaatatcaa agaaacaaag gcctgacaga
     3061 tgaacagata atagaaaaag gcctgaaagc aaaagatgag ctgataaaaa tccttcgctc
     3121 aaacaagaat atctatttgg aaataaccgg catagataga aaatggggca gatacgtagg
     3181 tatcttttac tataaagatt ctaagggccg ttatatcagc ataaacgaca aaatgctcaa
     3241 aacaggctac tgcccgcgat acatttttaa gccctacgac gagtatataa aatacaaaca
     3301 ttaaaagcct aaaacttcat ctgctggatt tcgatttctt ctatatcgca cagctcgttt
     3361 gctattttga tgctttcttc gtcgttgatg atttccaaaa gtatcaagcc cctgggcgag
     3421 cactggccgt taatttcttc atgcaggccg attctggttt ttatgatgca gccgtatttt
     3481 gtcagaattt cttgcacaga tacggcgctt tccagcctgt tgcttatttt tatgccgata
     3541 attgtagtca ttattgcccg ctttcttctt ctcctttctc tgcgcttttt gatgattcaa
     3601 aatgcagata ggcgtcgtta tcaaattctt cgtacagtat caggaatgtt tgtgttgttt
     3661 ttatcaaata tttcataaaa atttttctct ttagtaactg aatgtattgt ttacaaaaaa
     3721 aatgatactt acattgcctg taagtatcat ttttatattc tttattaagt aggtttactc
     3781 atctatttct gcttccagtg aggccaattg ttttttctta agattatgaa caaccgcatc
     3841 tactaaaaac tcgtatgatt tcatgttttg aatttccgga gaaaattcgc gaatcagaga
     3901 cgctcttacc atgtcttcta atctgtcgtt ggctgttttg acatcagagt ctgagcaaat
     3961 catatcaatg tattttgagt tgactttgta gtcttgcatt tgagaaaaca taagccactt
     4021 aagccttggc tttattgagc tcaatttttt tactattttt aagttcttaa gattaaacat
     4081 atatttaccc cacctgtttt ggttagttaa attgcggtag attttcacaa ttttataaag
     4141 tgtgctcaaa aattaaattt acttatttta cccatgctct taacaatttg ttactttggc
     4201 taaaataatt actagtattg tcctgttttt tgtgcgattt gtcaacgaaa aaaccggcct
     4261 tttaaattaa gaccggtttt gttgtttatt caattttgta ttaaaagcgg gttattccca
     4321 gcaaagtttg tttttaaatt ttttctcctt ttttctttgt ttaaaacaat ttttctcatt
     4381 gaacatgagc ttgattccct ccagctcttc ttgcaattct tccaatgcca tgtctgtttc
     4441 catgtcaaaa tgcatgttct ttgtaatcac gaatacgcct ccaattaatg tatatcctaa
     4501 accgactaaa cttcacacta tcggtttact ttttatgtat cggcattttt tttcaaaact
     4561 tgagtaaagt tttgttaaag tttacaaaat attttatttt ctttacgaaa cacgataaaa
     4621 tgtaattgga ggagaataca ttggataata cggataatat ttttgatata aatgcttttt
     4681 taagaaaagc tgtagaagag ggcgtttcag acgtacactt gagaattgat gaagtgcctg
     4741 ttgtaagaaa agacggaaaa atcatcaaaa caaattttcc gcaaataaca nntgtcttaa
     4801 acgttgtact gccaaaatat ttgagaacaa aagtgcaagc tgcttttgat cttgattttt
     4861 cttacgaaat caaaggcctt tcaaggttca gaatcaacct tgcaagacag atgggcaaca
     4921 cgtctttagt gttcagaata attccttacg aaatacctac ctttgaacag cttcaccttc
     4981 cgcccgctct taacatgttt tcaaaattcc acagcggaat cgtccttgtc acagggccta
     5041 cagggtcggg taaatctaca acaatcgctt ctttgattga tttgattaac aaaaacgaac
     5101 gcaaacacat catcacaatc gaagacccga ttgagtttat ctattccaac aaaaactgta
     5161 tcattaccca aagacaggta gaaatcgata cgctttcttt ccctgacggg gtaaaatatg
     5221 cgctaagaca agaccctgat gttatcctta taggcgaaat cagagatatc gaaaccctct
     5281 caagcgccat gaaagcagca gaaacaggcc accttgtaat agcttctttg cacaccaatg
     5341 atgctattca aaccgtaagc agaattgtgg gcatgtatga gccacaagat agagctaatg
     5401 tgcgcaaaca gcttgcagaa actttaaaag cctgtgttgc tcaaaaattg cttcctttaa
     5461 aaagcggaca cggacgtatc cctgcttgcg aaatcatggt tgttacgcct accatcaaag
     5521 actttattat caaagatgag ctcgagcaaa tctatgacct tgttaaaaaa ggctcttaca
     5581 acgacatgat tacaatgaac atgtcactgc tgcagcttat taaagaagac ttaatcacca
     5641 aagacactgc tttggatgtt agcgacaata aagttgaaat tcagcagatg ttaagaggcg
     5701 cttaccacgg tacaacagag agcttcgata ttcagttcta aaaaatcggc cataccatgc
     5761 agaactttac tacaaatgca atcaatttga agtcatacaa cctgtcggaa actgacaaga
     5821 taattgtcat gtattcaaaa gacaaaggca taatcaaagg ggttgcaaaa ggtgcaaaaa
     5881 aaaccacaag caaactcggc ggcagaatgg acatgctcgt tgcaaaccgc ttgatgctgc
     5941 acaagggcag aaaccttgat actatatgtc aggcacaggc aataaatacc tttaaaaata
     6001 caagaaacga tatggataag cttttttatt ccatatattg cagcgaggtt gtgcacagct
     6061 tcggcgtgga aaacgacccc aacagcgagg aaatctacga gctgttttac aaaacccttg
     6121 aggctgtttc aaaatccgaa aacaaagtgc agcttttgct ttccgttatc aaatttcagc
     6181 taaaaattac ccacatagca ggctactcgc tggagcttga ggcctgcgcc tgctgcggcg
     6241 gaacgctcga taacgacaac atttatttct ctgctcaaag cggcggaaca atctgtgaag
     6301 aatgcaaaaa acactcgata aacgctgcaa aacttcacca taaaatacgc gattttctta
     6361 atacgcttct gcagctggat tatgattcca aaacaagata cgacgagctt gcaacagaaa
     6421 aaatatgttc gttttgtttt gagcttatga aacgtcatgt ggagcagttt tcgccaaaaa
     6481 aaattaaatc agcacagata cttgaaataa caaaataagg aaactaagat gtcagaacta
     6541 tcaaaatata ttgaacatac cctgctcaaa caggatgcaa aaaaagaaga acttgaaaaa
     6601 ctctttgaag aagcaaaaca atacggcttt ttaggcgtgt gcataaaccc ctgtaatgtt
     6661 aaatttgcaa aagaaaatct caaaaactct gatgtaaaaa tcgtaaccgt tgtcggtttt
     6721 cctctgggtg caaaccttag cgaggttaaa gcgtttgaaa cagagcttgc aataaaagat
     6781 ggtgccgacg aaatcgatat ggtaataaat gtctcaaaac tcaaagacag ggattatgac
     6841 tttgtgcaaa aggatattga ggcagtaaaa aaagcttgtg gcaatgtgcc tttaaaagtt
     6901 attcttgaaa cagacctgct gacatgtgaa gaaatcaaaa aagcctgtga gttgtgcgtg
     6961 gcagcaggtg ctgattttgt caaaacttca acaggctttg taaaaaatgg tgttggtgca
     7021 aaagcagaag atgttgagct tatggccgct gtggttaaac ctcacaggct tggcgtaaaa
     7081 gcttctgccg gaataagaga taaagaaaaa gctcttgcca tggtaaaagc cggtgctgac
     7141 aggcttggta caagctcggg tgttgcaatt gtttcctaat ctcaaggcgt aaaagtttgc
     7201 ctctgtatta caattgattt gtaattgagc tgcttttttt gtaaaatttt tttaaatgca
     7261 aattgtagtt tgcaatggtg tggaatttat gaagtttaca tatgacgaaa tagtaaaggc
     7321 aacgggtgct acagtgctgc aatgcgccag taccgcaggc aatttgactg tttctacaga
     7381 ttctagaaat atcaatgacg gaaattttta tattccttta aaaggcgaaa aatttgacgg
     7441 tcatgatttt attaaagatg cggtcgataa aggtgtgcgc ggctatttta cctctgacaa
     7501 aacacttatc tttccaaaag ccaagtttat tctttatgta gaagatactc tgattgcata
     7561 cctcaaactt gctctttatt acaaagaaaa aattaacccc gttaccatcg ccatcacagg
     7621 cagctccggc aaaaccacca caaaagagat gatggcttct gttatgagca agggctataa
     7681 aattcataaa tcccctctaa atcataacaa cgaggtcgga ctatgccaga cattgctgtc
     7741 tatgcctgcg gatacggaag tgttgatact cgagatggga atgcgcgggc ttggcgaaat
     7801 agagcnnnnn nngttattgc aaacacagga accgctcata taggtcgttt ggggtctgta
     7861 aaaaatattg ccaaagcaaa atgtgagatt tcaaaatacc tccacgaaga aggcctgttg
     7921 attgctcacg atactgaatt aataagaaaa acaaacacct atcaaggcca gacaatttat
     7981 gttggtctgg acagccccga gcttaaaaat gtcaaactgc accctgcttc aagcgagttt
     8041 gattataaaa accatcacta caagcttaat gtagagggtg aacacaacat tcaaaactct
     8101 ttgtttgtta taaattccgc cttaaaactc ggccttaatc ccgaaaaaat tgcagccgga
     8161 ctggaaaatt acaaacctat tgaaaaaaga tggcagcttt cacatattgc aggttatacg
     8221 gttgttgatg acagctacaa ctcaaaccct gattcgctta gggcggcaat tgatactttc
     8281 ttgtccacac aggacaaaca cgggcctgaa agatggcttg tgctgggtga tatgaaagag
     8341 ctcggcaaag gcgagcggaa ttatcataaa gaaatcggtg aatttattga taaatatgta
     8401 aatgtaaaat taatcaccgt gggcacgctg gcaagataca tagcgcaaaa ctcaaaacat
     8461 atctcaaaaa gtttccctaa caacaaaggg gttgctgctt ttatcaaatc acacgcaagc
     8521 gagggatgtg caattttgtt taaggcatcg cgctcaatga agtttgaaga aataattaag
     8581 gagcttgaaa aactatgatt ttatccatag tggcggcact tgtggcattt gttcttgcat
     8641 tgcttttagg tgtgccttat atagattttt taaagaaaaa aatgctcggc caatatatta
     8701 gagatgaggc gccggaatct tacgccaaaa aaggcggaac tccaacaacg ggcggcgttt
     8761 ttcttgtgac ggcggctgta ctttcggctg ttgtatctct gtttatggca gaaaaaacct
     8821 caacaggcgc atttttgctt ctcattacat ttatttttta catgtttgcc ggatttcaag
     8881 atgacgcaca aaaatttgcg caccatgaaa acaaggggct tagcgcaaga ggcaagctga
     8941 tacttcaaat agcaattgcc tgtcttcctg taatgtttgt tactatcggc ggcagaacgt
     9001 ttttgacatt tggcgaatat actttgaatc tcggttatct ttacccgatt ttcggcatat
     9061 ttttgattac gggcgtgtcc aatgcagtta accttacaga cggtttagac gggcttgctg
     9121 cttccaacat ggttatttca acagctgcat tgactatcat aaatctgatt atgggcaatg
     9181 ttgatatagc tatcatctgt gctgctgtta tgggtgcatg tctcggattt ttgtacttta
     9241 acaaacaccc tgccaaggtg tttatgggcg acacagggtc tcttgctctg ggcggcgtgc
     9301 tcggtacaat tgctgttatg ggcaagtttg agttgtggct tattccaatc ggtataattt
     9361 atttaacaga aactctgtct gtaatgcttc aggtcacaag ttttaaatta acaggcaaaa
     9421 gaatattcaa aatgagccct attcatcacc actttgagct gtgcggatgg aacgagacaa
     9481 aaatagttaa agtatttacg ctcatcaatt ttatcttttg tacgggcgct gtagctctgt
     9541 tctggtattt aaacagatag aaatcgtaag gcaataaatg ataagaaaat ggtttgataa
     9601 aaaagtttta atcctcggcc tgtcaaaaag tggcatggct gctgcaaaat accttaattc
     9661 aaagggggcg gattgctata tcacagagca aaaaccgctt aaacaagagg attgcaagac
     9721 cgttaaagaa ttaaacgaac tcggaataaa aacagagttt gaacaccatt cagatgagtt
     9781 tatgcaagat gtgtaccttg ctgtaacaag cccggggatt ccccctcgtt cagagcttat
     9841 gctcaaatta aaagaaaaaa atattgatgt gattagcgag gttgagcttg cttatctgga
     9901 aacacaagtg ccttttgttg caattacggg cacaaacggc aaaaccacca caacagagct
     9961 tacaaacttt attttgaaca aggaatttaa agcacaaaaa tgcggaaaca ttggcattcc
    10021 tccctgctct ttgcttgatg acgccaaaaa aacagacttt tatgtgtgtg aagtaagctc
    10081 ttttcagctc cactacagcc gcagcttccg tcctcagatt gctgtgtgga tgaactttac
    10141 ccctgaccac attgactggc atgggggatt ggaaaactat tttaaagaca aagcgtcttt
    10201 gttctcgccg tccaaaagac cggggtttgc tgtttttaac gcacaggatg aaagactgct
    10261 cgccttcggc aaagaatacg caggcgaaaa attctttttc ggtgcagaat ttgaaacaaa
    10321 ctgctcttat ataaaagacg gcgcaatttt ttacaaacgc gccaaaggca gtgaagaaaa
    10381 aattatcgat ttaaaagata tacctcttgt gggcaatcac aactatcaaa acgttatggc
    10441 ctcgattatc tgtgcaaaaa tagcaggcgt tccttcggaa aaaatcactg aagcgataaa
    10501 agaattcaaa gcacccgagc acagatgcga gtttgttgca aatatacagg gcaaagatgt
    10561 ttacaacgat tcaaaagcca caaatcctga ggctgcaatt gttgcaatac agtcttttga
    10621 gggaagaagc gttaccctga ttgccggcgg aaccgacaaa aataccgatt tgacagagtt
    10681 ttgcgaagct gttaaaaaat atataaacca tgttattttg ctcggacttg caaaagacag
    10741 gttcgaggca gaattgcgaa aaaacggata tgaaaacata accatagccg gaagttttca
    10801 agacggagtt gataaggcgt ttgaaatgga tgatgaggta attcttcttt cacctgcctg
    10861 ctcaagctat gatatgttta cgggttatga acaacgggga agagtattta aagactatgc
    10921 cttatcaaag aaataacaga caaaataaaa gacattcagg ccgcagaaac tacggatatg
    10981 aaaacgaagg cagaggcggt gtgccgtcag atgttgtgct gtctccgcct gatacgactt
    11041 tgatggtggt ggttgctttt cttgttgtaa tagggcttat ggcaatattt tctgccggtg
    11101 cgccaaaggc aatggatatg ggccaaaatc ccgcttcttt tgcgcttaaa cagtttgctt
    11161 accttattgt ggggtttttc gggcttaaat attttatgaa ccttgattat aaaaaactgc
    11221 gtgactgggc agtgcctttt gcgtggtttg ttattgcaat gcttgctctt gtagacttta
    11281 cgccactggg ggtaatagtt aacggcgcaa gaagatggat tatgctcggg ccgattcagt
    11341 ttcagccgtc tgagatgacc aaatttgcag ttatcatgct gcttgcaaac gctttttaca
    11401 gagatgcaaa tatttttagc tccacaaaat ggtcaaggta ctttgtgcct atacttataa
    11461 tggtatttct tgtatttaaa cagcctaacc tttccatggt tattttgctt ttgattacgt
    11521 caatggttat gtatttgagt gttgcagggt ctgttaaata tatggtgaca atagggcttg
    11581 cgggtattgc ttctgctgtg gggacaataa ttttgttcgg taaaaaactt ttgcacggtt
    11641 atcaaatgca gcgtatccag atatggctca atccaaacat ggacccttac ggtgctggat
    11701 acaatattat ccagtcgctt cttgcatttg cggcaggcgg tttttggggt gtgggttacg
    11761 gaaactcaaa acaaaaactc gcatggcttc ctgaggggca cacagacttt atttttgcag
    11821 taatagccga agaactcgga tttttagggt gctttcttgt aatcggactt ttttggacat
    11881 ttatccacag aggcataatt atatcttcgc gtgcaaacga catgttcggc aagcttcttg
    11941 ccgtaggcat cacgctttct ataggccttc aggcttttat caacatgagc gtatcaagct
    12001 cccttatacc ggcaacaggg gttccgctgc cttnnagcta cggcggtaca tctttgattg
    12061 tttctttgtg catggtaggg gtgttattaa atatttccaa aaagagaata aaaaggataa
    12121 gaaactatga gcgaaactac taataacaat aaaaaaacat attttgtcac aggcggaggc
    12181 acaggcggac atatttaccc tgctgtggct gttggaatgg ctttgcaaaa agaagccgat
    12241 acaaacaaag tcttttatgt gggcannaaa agaaaattgc agaagacaaa gtgtttgatt
    12301 ttctcggggt aaatattacg ggaatgccta aaacttgcag ctttgacttt ttaaaatgga
    12361 gcttcaaact gctttttgcc actgtaaaat caatgggtta tatcgttaaa taccgcccta
    12421 atcttatttt cggaacaggc ggatatgtaa gcgcaccaat gctttttgcc ggtattttga
    12481 caaacactcc tgttgtaatc cacgaatgcg acgctgtagc aggcaaggtt acaaaactca
    12541 ttgctccttt tgcaaaatca gtttcctgtg catttgaaag cgcaacagaa aacataaagt
    12601 ccaacaacct tcacgttaac ggaaaccccg taagagaaga gtttttgagc atagacagat
    12661 accacgcaag acaaaaatgg aaccttaaag acaaactcac tatcatggta atgggcgggt
    12721 ctcaaggtgc taaaaaaatc aacagcgtgc ttgttcagtg tctgaaaaaa atctttaaaa
    12781 aatacgatgt ccaaataatc caccagaccg gtcttaaaaa ttatgacgag acagttaaag
    12841 aactcaaaaa agttttccct gtttatacgg aaaactctca atacattgta agaccttatt
    12901 tcaaaaaaat gtaccttcct atgattgcat cggatatcgc tgtttcaaga gcgggctctt
    12961 tgagcatatc agaaatctgc gtatcaggcc ttgcgtctat tcttattcct tacccttatg
    13021 ccgcagccga ccaccagcgc aaaaatgcaa aagaaatgga agagctcggt gcttcgcttt
    13081 atcttgatga tgctgattgc acaccggaag cttttatgga gaagctggag gaagttatca
    13141 acaacactca aaaaatgata gaactccaga ataacgcaaa aaaactggtc aaatacgacg
    13201 caacaaaaaa catagtagag cagataaaag ctgtcgtaaa ataactaaaa aaacaggtgt
    13261 ttatggcgca aatttgccag cagtgtatgt ttgcgctata atattataac tgttatagaa
    13321 tatcaggggt tagactgagt gaacaagctt gataaaaggc ctgatttaat tgaaaaaact
    13381 caagagaaaa ataacaagcg gaaaaataaa atccgtttct attattcttt tttgacaata
    13441 gtgctgttga tttgtcttgt gcaaataggc ataagtgctt ttaacaacat tacaaaaagt
    13501 atcagctatc acggtaaaat caaaaaaatg aaagcgctta accagcaggc ctatgcagaa
    13561 aaccagaggc ttaaagaaga gcttgaagat ttcagctcgc taaaaagcct tgaggctatc
    13621 gcaagaaaca acctcaaaat ggcaggagaa gacgaggtgc ttgttatcat caacaaacct
    13681 caggctccgc cggtggaaac caaaaagaaa aaaggtctga aaaaaatttc ggataaaaaa
    13741 taataaagag aaagctcctt ttgcgtaact tactgccaaa aggagctttt gttaataatg
    13801 ttgcgacata gaagtaaaaa ccttacttcg ttcttgcttt ttcagcactt tggttaaagt
    13861 aaacgtgcat atccctgttt acttaacagc tacgagtttt gcgcttattc cgatatcgga
    13921 attaatcatc ctggcgcttg caatggccat ggatcttctt ttttttgcac ctcttaacaa
    13981 aaatgcaact ccgtcgctta tattacttgt tggtttttga gcttttttta tcatttgnnn
    14041 nnnnnnnnnn nnnnnnnnnn ngtctatatt tgttttatcg ggagaattaa aattttcttt
    14101 aggattttaa ctctctttgt tacataacgt tacaaaaaaa gctcaaatac tttttcataa
    14161 aattgtatta ttgaccggtt ttaaaataac cgttaaaata ataattacca cataaggaaa
    14221 gcagggtgaa aatcccacac tggtccgcag ccgttaaagt cggaatgctt gtatggtatg
    14281 tattacttcg agacaaggag atttttatgg gattttctca aactaacaca aannacgggg
    14341 ttgttaagct tacacaggtt tcttcgcctg ttggtaaccc ctattcgtct aaaaccgcac
    14401 aggtaaagga cctttttatc gacaaaaatg ttaaacttgt agatgactac ctcaaacagc
    14461 ttgactggca ggttaaagaa aactctaaca tgacctactc tgttcagggt ttaaacaact
    14521 atatttcttc tgccataagc aaaaattact ggctaaataa aatttataca cccgaaataa
    14581 aatacgctca cgaaaacggt gatatccaca tccatgacct gaatctcatt tccacatact
    14641 gcgtgggatg ggatttgaaa gaccttttga tggaaggttt tactggagtc gacggaaaga
    14701 taaaatgcgc tccggcaaaa cattttagaa cagcactcgg ccagattgtg aatttccttt
    14761 atacaatgca gggcgaggca gcaggcgcac aggctttttc aaattttgat accctccttg
    14821 caccgtttgt aaaatatgac aaactcgaat atgcacaggt taaacaggca atgcaggaat
    14881 ttgtcttcaa cctcaatgtg cctacgcgta cagggtttca gacaccgttt acaaatataa
    14941 caatggatat gacagtgccc tcgtactatg ctgatcatcc cgttatcata ggcggagagc
    15001 ttatggaaga tacctataaa gagtttcaac atgagatgaa cctcattaac aaagcttatt
    15061 tcgagataat gatgcaaggc gactgcacag gcaaggtatt tactttccct atccctacat
    15121 ataacgtgac aaaggatttt gactgggata accccgagct cgaaggcctg tgggaaatga
    15181 cggccaaata cggcattccg tacttttcaa actttattaa ttctgacatg aaccccgaag
    15241 acgcccgctc tatgtgctgt cgtttgagaa tagataacag agaactggaa tacagaggcg
    15301 gcggcctttt tggctcaaat ccgcttactg gttctgtcgg cgttgttaca atcaatctgc
    15361 cgagaatagg ctaccttgca aaaaatgagg cagaattttt ccgcatgctc tgccgcaata
    15421 tggaactggc aagagaaagt cttgaaatta aaagaaaagt cattgaagac tacactgaca
    15481 aaaaccttta cccttacaca aaattctatc tgagagacat aaaagcaaga cacggctctt
    15541 actggaaaaa tcacttttca accatcggcc ttgtcggcat gaatgaagcc tgtgaaaacc
    15601 ttaccagtaa aaacataggc acagatgaag gcagagaatt tgcgctcaag gtaatggatt
    15661 acatgcgcaa tatgatttct aatttccaga aagaaacagg aaacaactac aaccttgagg
    15721 caacacccgc agaaggtaca acctaccgtc ttgcaaggct ggataagcaa aaatttgatg
    15781 caataaaatg tgcaaaccag catgaatatg aaaacggcgc aaaacctttc tatacaaact
    15841 caacgcagct gcctgtaaat tatactgatg acatattcga gcttctggac aaacaagatg
    15901 agctccagac aaagtataca ggcggtacgg ttgtccatat attcgcaggt gagagggttt
    15961 atgacacaaa ggttgtaaaa aaccttgtca aaaaagtctg cgaaaactat aaactgcctt
    16021 acttcacctt ctcgcctaca ttcagcattt gccccgagca cgggtatgtt gcgggtgaac
    16081 actttacctg tccggattgc ggcagtgcat gcgaggtgtt ttcaagagta gtgggctaca
    16141 tcagccccgt aaatcagtgg aatgaaggta aaaaagaaga attcgcaatg cgaaaaacct
    16201 ttgattcctg ctgttgtgaa aaccgcgggg aaaaatgctc atagccggtt tacaaaaatc
    16261 ttctttgttg gattaccctg aaaaaattgc ggccgtagtt tttacctgcg gctgcaattt
    16321 cagatgcgat tactgccata atccggatat tcttacggat tttcgctctg atgctgcttg
    16381 tgatgaacaa cacgtgctcg attttttaaa ttccagaaaa ggaaaactcg atgctgtagt
    16441 tgtttcaggc ggcgagccca ctttgcagaa ggacttgccg gagtttttta aaaaaattaa
    16501 atcaagaggc tttttaacaa aactcgacac aaacggcaca aaccccgatg ttgtgaaaaa
    16561 actagtgcac aaagggctgg tggattatat tgcaatggat ataaaggccc ctgttgaaaa
    16621 atatcatctg ataacaaaca cctgtacaga tattgaaaag attaaagaaa gtattgattt
    16681 tataatgaat tgcggggttg attacgagtt tagaacaaca gttgtaaaat cctctcttga
    16741 ggaaaaagac cttgaaaata tcggaaaaac tataaaaggc gcaaaacgat actatttgca
    16801 aaagtttgtt gcaacaaaaa cccttaaccc ggcatttgct tttgaaacaa catattccac
    16861 acaggaattc gagcatataa agtcactttt gctcccctgt gttaaagagg tttttgtgcg
    16921 ttaatacttt aaatggcggg tcgaattttg tgaagtttta tgctaaacca ttgttatgaa
    16981 gannnnnnnn nnnnnnnnnn nnatgaacct tcctgtgctg gctgatgtaa tgccatatta
    17041 taccggggca ataagcaagc agaccatagg ttttttgcag gtgccaaaaa gtttcagcct
    17101 gtatttgtac ccgcgctatg attctgaaat cgtggatact gtaaaatgga caaacacctc
    17161 tgttgagttg aaaaatacgt ccatagaacc gtcagggctt tttgcagcgc agattaaaan
    17221 nnnnnnnnnn nnnnnnnnnn nnagatgagc aggatgactg gtacaagata gtttatgaca
    17281 aaacaaataa caaatccgca tggataaaac ccgcagcaga agatgatttt tggagcttaa
    17341 gagaatttta ctcttacttt ggcagaagat acgggctgta ttacatgaaa aacgtggact
    17401 acagaaaacg cggaatctac agcggagccg atgcattgtc tcaaaaactc ggcgggttta
    17461 canntaaaat ccatccgttt gaataaaatc agcggaaact gggcgcttgt tactgtttcg
    17521 gacatcgaca gtcttccaaa aataggctac atccagtggc gcgagcagga tggcactatc
    17581 cttatttttc ccaaactcga taagtaactg cttttttgtt atataatttt tcttggacat
    17641 atttaaaagg atatgaaaat ggaaaacagc aaaaaaggac gtattgttac aggcatgaga
    17701 cctacgggta agcttcatct gggccattat ctcggggtgc ttaaaaacat ggttaaactc
    17761 cagaacgagt acgaatgttt cttttttgtt gcagactggc acgctctgac tacaaaattt
    17821 gactgcacgc aggatttgat acagaacaca aaagatgttg tcttagactg gcttgcagca
    17881 ggtattgacc ctgaaaaggc tcatatctat atccagtcgc atctgcccca gacagctgag
    17941 cttcatatct atttgagtat gattaccccg caaaactggg tggaaagaga cccgacctta
    18001 aaagaccttg taaaaatgat acgctcggaa aatgacgact ccaaacccaa cgtatcttac
    18061 ggctttttag gctaccctgt tttgatgtcg gctgatattc ttacttttaa cgttgattat
    18121 gtccctgtcg gcattgacca ggttgcacac atcgagatta cgcgtgacat tgcaagacgc
    18181 tttaataata tttataaaac agagctgttt aaagaagcaa aacccatgct gacaaatata
    18241 ccaatgctca aaggtgtgga cgggcaaaaa atgggtaaat ctttccacaa cgacataaaa
    18301 atctcagatg atgaagaaac aacatcaaaa acaatcatga aagcaataac tgacagaagc
    18361 cgtgcaagaa gagatgaccc cggccatccg gataaatgcg aagtggcatt tgagtactgg
    18421 aaagcatttg caacagaaga aaaagttaaa caggtagaat gcgaatgtat tgccggcaaa
    18481 cgaggctgtg cagattgcaa acgcgaactc ggctgtgtga taaacgaaca gttaaaagaa
    18541 atcagagaac gcagaaaata ctacgaaaac catcccgaaa ttgttgaagc aatcatcaaa
    18601 aaaggtgatg aaaaagcaag agaagaagct gaaaaagtgc tcaaaaaaat aagaaaagca
    18661 gtagggatgt atcaaaatta atttgacagg agcgtaaaat gccgctgaca ggcaaaaaaa
    18721 ttctgatagg tataacaggc ggaatcgctg catataaggt gtgcgagctt attcgcatgt
    18781 tcaaaaaaca aaatgcctgt gtcaaaacag ttgtcactaa aagcgctctg gaatttgtta
    18841 caccgcttac attagagaca ctttctcaag nnacagtttg aaacagaatc taaaaaaccg
    18901 gagcacattg cgctttgcga ctgggctgat gtgtttttga ttgctcctgc cagtgcaaat
    18961 actatcggca aaattgcaaa cggcatttgc gacaaccttt tgacctcgct tgcgtgcgca
    19021 tttcaaaagc agataatttt tgctgttgct atgaatacag gcatgtggaa taataaagcg
    19081 gttcaaaaaa atattgaaac cctaaagtct tacggtgcaa ggtttgttga ccctgattcc
    19141 ggctaccttg cgtgcggcac agagggtaaa ggcagactgg ctgatttgaa tgatatttgt
    19201 gatgcggtta aaaatgtgct tcaaaatgca gatgaaagcg ctgacaacaa atttttaaaa
    19261 ggcaaaaaag tagtaataac agcaggcgga acaaaggaaa actttgaccc tgtgcgttat
    19321 atcggaaatt acagctcggg caaaatgggt gctgctcttg caaaaaaagc ctttgaagcc
    19381 ggtgcaagtg tcacgctcat tgagaccact ccccttttaa gggactgctc tgattctata
    19441 aacacagtag atgttgtcag tgcaaaagaa atgcttgagg cggttaaaga ggaattttta
    19501 aataaaaatg ccgatatcct cattatgaca gcggcggttg ctgattacag acccgagaca
    19561 acagagcagt tgaaagtaaa aaaagaaaat acagacgaat tgacaataaa gctcgtaaaa
    19621 aaccctgata tattaagtga aatgtgcaaa ctcaaaaaag aaggcatgca gattgtgggt
    19681 ttttgcgcag agacaaatga ccttattgag aacgcaaaag caaaaatcaa aagaaaaggc
    19741 tgcgattggc tggttgccaa cgatgtatca agaaaagata caggattctc cagtgacttt
    19801 aacgaagttt atgtcttgga caaaaatctc aatattgtta aaatagataa ggacacaaaa
    19861 gaaaatattg cgtcaaaaat actggagcag atatggcaaa aacaagcgaa ataataaaga
    19921 ttttagagga atatgcgccc cccgagctag ctgaaagctg ggacaattcc ggatggcagg
    19981 tgttttttgg aaacgataat acctcaaaag tattgttgtg cctgtctgtg acggatgagg
    20041 taataaatca ggctgttgag ctaggttgca atcttattgt gtctcaccat cccgtgattt
    20101 ttaaaccgct caaagtgata aaagacgtaa aaatcatcaa aaccatccag cgcggaattc
    20161 agatttattc gctccacaca aactgcgata aaacaaacag aggcacaagc gaccttattg
    20221 ctcaaaagct taaccttaaa aaaactgctg tgctaaacga ctttgtcaga gtggggcttg
    20281 ctccttatga aatgactctg gacgagcttg tttcttttgt aaaactggct tttaatgttg
    20341 agagaataaa acttgttaac aatgcaagaa aaacaatgat taaaaccata gcagtctgcg
    20401 ccggtgcagg ggctgatttt atacaggaag ttgaaaaata taatattgac gcttatgtga
    20461 catcggaagt aaaatatcat gacgcactgg attctagacg tgcagtaatt ttggatgtag
    20521 gtcattttga atctgaaaaa ccttttgtgg aagagataaa aaaccttctg gaaaacaaaa
    20581 aacatagaat agaggttgtt gttgcaaaag aaaaacccgc atgggaatac gtttaaactt
    20641 aatatccttg tcatctgttt tttgctgatg acggtttttt cttctgctgc caatgcttac
    20701 gagaccgctc ttattacata ccctgagtat aataaaaact ggaaacaggt atattttggc
    20761 aaacaagatg acgaagtaat atcgcaatgg attccgtctt attcttatac aaacgactgg
    20821 gtcgagtcag ttgttttcca cgcttacaga tgggcaaagg ggannnttta tgtccaacct
    20881 tcttgccggt gcagcttcac gcaacaatac attcagaagc cggattctaa aagacagacc
    20941 cgaagactct gtagcaatct ggtgtgtgga aaaaactccc gcaatggctg cccagtgcga
    21001 aattttgagg gttacctctt cttatgaggg gattgtgtct atccattatg taaacaaaaa
    21061 tcccgcatat tttaccaaat atctgcaaga agactggctc aaaattataa gagacgtaag
    21121 aatctattac agctacttcc gctgggacag agtaacaggc aaagaaacat cagtgcaatt
    21181 gcagtaaact ttaaaagaaa gcaaaaaata atattttcaa actttaatca atcatgatgt
    21241 catatcttgg aacaattatc ggcaatatca caaaatcaaa actttctgcg ctttcaaaag
    21301 aatctgcgga aagaataaaa agtgttgaag aagaaaatgc ttttcactcc aaaactcttg
    21361 aagaattgtt cacggaaaaa tacgactaca aaggttcgga gcctgataca atttatgtaa
    21421 aaaatctttt gactggtgag cctgaggcag tgaaggttga tatagaaatt aagccggatg
    21481 caaactttaa ctttgctcaa gaaacataca gactgcttga taaagaagga catgaagcag
    21541 gcaaaaaaaa tttttcctac agaaaaatgc ccggaggcaa atatgttatg tattcgggtc
    21601 aaatggataa tttttcaaaa atatacggtg gtgtcggaat cagactcgac caaatgcata
    21661 ttgaaagagc tttgcagctt ggagttgatt ctatcccgag agagtcactt gcaaaagcta
    21721 cactttacca tacaaaaatg ggatttgttc cgattgagaa aaaattagtt caactgaaaa
    21781 gtataaatca ggtgaaaaat tttacggaag aagaattctg ctataaagca aagtctatac
    21841 cgttaaacga atttgagcct gtaatagtgc aaaaaggaag aaaattttat atagacgtaa
    21901 ataaaacaca aactttaaca aacctgaaaa tgtgtaaacg acagattgaa aaaacaggat
    21961 ttcgacgtat tttgtatctg gacagcacat atacaaattt aactttgagc gggcaagaat
    22021 tgctaaggtg gaagcaaatc ataaaaggtc atgaaatctt accaaagcta agttttattc
    22081 ttccaaagtt ttaaaacaga cttgtttgtc cgttgtcgtc tttaggcact ttatacccga
    22141 gcaacctgta gccttcgggt gaaatctttc tgccgcgcgg tgttctctgg attatgcctt
    22201 cctgtaaaag atacggctca tagacatctt cgattgtgcg ggcgtcttcg ccgagagcag
    22261 cagctaatgt ttctaaccct acggggccgc catcgtattt ttctataatg agggttaaaa
    22321 gagccttgtc tgttgcatca agaccgttgt catctatgtg gagcgtgttg agcgcgtcta
    22381 tggcggtgtc gtttgttatt tttccgtctg ctctgaccag agcgtaatct gcaacacgct
    22441 tcactagcct gtttgcaata cgcggtgtgc ctcttgagcg gcttgcaata acttttgctc
    22501 cgtctgcatc tattcctatt tcaaggattt ttgctgtgcg tgacaccacc tgtgacagct
    22561 cttccaccgt gtaaaactgc aatctgtgta ttatgccgaa acggtctctt aacgggcctg
    22621 acagctctcc ggcttttgtt gttgcaccaa tcagtgtaaa ctttggcaaa ggtacgcgaa
    22681 gagtctttac agtctgcgct tttcctgttg tcatgtcaag gaaaaagtct tccattgcnn
    22741 tgcagggtat aggatttctt ccgttacttt gttcagcctg tggatttcgt caataaacaa
    22801 aatatcaccg ttttttaatg acataagtat gccaatgata tctcttggcc gctccagagc
    22861 aggcgcagag gttattttga tgtttgcttc aagctcgttt gcaataacag aagcaagcgt
    22921 tgttttaccc agtcccggcg ggccgtaaaa aagcaggtgg tccagctgtt tgtttctttt
    22981 ttttgcagct tctatagaaa ttttgagcgt gcttttaaga gcgctctggc caatgtattc
    23041 atccagcttt ttggggcgga tgttgttttc aaaagatttg tcaaaagcga tttcttttgt
    23101 ctcaaggttt tcgctttttg cttttttgtt tatatcaagg ggcttttgcc tgttgtcgtc
    23161 atccgagata attgccacgg tttgtcctta attatatttg tcgacagaaa tttgtaatat
    23221 aattatagca gaattgaaat taaataacga aggtgttaat tatgtctaaa accgcaatca
    23281 ttattccgtc acgttacgca tccacaagac tgcatgcaaa acctctcatc gaggttgaag
    23341 gcaaacctat aatccaatgg gtttatgaaa aagcttctgc cgtaaaacag gcggacgagg
    23401 tgattgttgc aacagaccat gaagaaattt ataactgcgt aaaaagtttt ggcggtacgg
    23461 tcgaaatgac ccgcgctgac cataaatgcg gctcggatag gatagcggaa gtcgcctcaa
    23521 gacaccctga aatggagtat attgtaaacc ttcaaggcga tgaacccatg attacacccg
    23581 agagcattga cagtgtaata acagctctga agacaggcga aaatgctgat attgcaacac
    23641 ttttgagaat aattgaagac aaagacgaag ttgaaaaccc taaccttnna ccttgtaaaa
    23701 tgcgttatag acaacaacaa ttttgctttg tatttttccc gttcaaaaat tccttacgaa
    23761 agaaactttg acgaagctgt attctacggc cacatcggcc tttacggcta caaaagagaa
    23821 gctcttttca aaatgacctc tctgcctcag acaatgctcg agaaaacaga aagccttgag
    23881 cagttgagag cgctccagtc aggcatgaga ataatcactt ctgttgtaaa cttcaaaccc
    23941 atcggaattg atacaaaaga ggatgtggaa gagtttaaaa aagctttgaa taaataaatc
    24001 gcaaattttt agatttacgg tttttattgg aaatatgaaa atccaagata tttctaatcc
    24061 atacgataaa aacctcttat tccccggcaa aaacagagtt ttttgcaatg cagacatttc
    24121 ttgttcggac actgtttctt ttaaggcaaa aactccggag ctttatcgca gaatggatgg
    24181 ctggtgcaat tttttctatg ataaaagcgg tctgaaaaaa gaaataactg aaaaaatacc
    24241 tctgtttaaa aataaaaaat ttacttttga tatgtacaaa aaactttctg atgaagaaaa
    24301 aaactatttg cgcactcaaa taaaaaagcc ctacctaaaa gatgaatatc tgataattga
    24361 ggcaaagcga acaattgaaa acgatgctaa attttttgta aaactatcta aaagacttaa
    24421 aaatattatg gataaacagt atccccaagg ttggacgcta gtgtcgatag gtgctnnnnn
    24481 nnnnnnnnnn nnnnacatct cggagcagat gcaaaaattg ttccgttttc aaaacgttta
    24541 aaaagagatc ctgcttttga tagtataaat tttgacaaat attttaacga agtcggacta
    24601 acaaaagatt cttttaaaga aaaaaaacaa atgatctaca ctgattttgt cagtggaggt
    24661 gaaacaatca gaatgtttga aaatcttata aaatcgaccg gcagatatnn nnnnnnnttt
    24721 caagtctttt tggactaaat ctgaatgtgc atgaagagga gcttttaaat gaatttttct
    24781 ttaataagag tcagataaaa tcatattccg catgtcctta tatgaattct gctacaagat
    24841 gtgaaaatat tttgcagctc gataaacaat ttaattggac ttttgcatca aaacttatga
    24901 attttgcttt tatggataat atcgaaaagg caaaaaattc tttacccgca agaatcttgc
    24961 cctcaagaat cttgcaattc ttaccggatt tgcttgttaa tcattaaact ctttaaccag
    25021 ccgctctatc cagccaaaaa tgcccaataa ctcgtaaggc tttggtaaat agaggtcagc
    25081 accggcattg agggccatct ttttgtcatg cactattgtg gaaagcacta tttttatgcc
    25141 tttatacttt tcatcctttt tgagtttgcg gcacaattca agccctttta atgtatcaac
    25201 ttctcctgcg tccagcacaa tcaacgcggg gtcaaatgtt tttacaagat tcattgcaat
    25261 gtcatagtcc tgtgccgaag caacctgata tccctgcatt tcgccagttg tttttaaaag
    25321 gtaattgagt gcctcatcag gttccagtat cagtattttg ttgttgtaat ccctgtttaa
    25381 aacagcgttg tcagcgctga tttttgctct ttcaaccacg tatgaggatt ttgtgttaag
    25441 ccgtgcaagt ttacctgtgg caaaaagtgc gttcaaggct gcatttacac tggtgtatgt
    25501 ttgaaattcg cttgatatta taccaatgct tgttgacaca aggcttattc ttttgcctgc
    25561 attgtcatcg ccgtggagta ttatgtagcc cgattttgcg tcttcttcgc tgtagaattt
    25621 gtctacaatt gcctcaaatg cgtacacgag aaaagatgca atgtgctctg ccttaagcgg
    25681 gtttgtcaaa acgagaaact ctccgtcagt aagctcacct aaaaagtcat tttcgtccag
    25741 tgcggaattg ataatggcgg nntgtaggtc tggagcattt tgtcagaggc aagctcgccg
    25801 tatatttctt tgtatgcttc aaactcgttg atttttacga gcatggcagc ccattttttg
    25861 ttctgtgcga ttgttctttt gagtattttg agtgctgatt ttgcatcggg cagttgtgtg
    25921 acttctgaaa tcatgctctc aaaatgacgt cttaaatgcg cattgattct ggctttgaac
    25981 tcgtcagact caatcggctc gctcaaaaag tcatcagcgc cggcatccag aacatcgagt
    26041 ttgtcttgca gctcggctga ttttgacagt gcaacaatac acggacgcga gggatagctc
    26101 atcattctga gcctttttac ggcatccgca ggctgcatgt caaggctgtc tgagacaatc
    26161 accatgtcag gctcgtattc tgtcaggatt tcaagccctg tttcaaaact cgaagcgcat
    26221 aacacgctta cgccgtttgt ttctatgatt tttttatact ttgccggaag ctcttttctt
    26281 ttatctaaaa tcaatacaag tttggataac attatttatc ctccaatgct ttttcgctct
    26341 ggtttgtg
//
LOCUS       DABS01000138           10513 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13399, whole genome shotgun sequence.
ACCESSION   DABS01000138 DABS01000000
VERSION     DABS01000138.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10513)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10513)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10513
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..625)
                     /locus_tag="CPT85_05980"
     CDS             complement(<1..625)
                     /locus_tag="CPT85_05980"
                     /inference="COORDINATES: protein motif:HMM:PF13533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22604.1"
                     /translation="MEENNKNEEAMASVSDNTEKSSKRGKKTKKVVKKRFLIPTLLIL
                     VLCLLGWMYFSTFETTDDAFVEGHIIRVSPKVTGIIEKLYVDDNDHVKKGKLLLTIDD
                     RDYKVRYEQAKAAYEMALYKQKSAVVDRNAAQTDMKVAQQDYDRYKNLYEKGAVSQQE
                     YDRAKSKFDMAKANYATAQQAVFSKEKNKVADAELKRLEAVMNQAALE"
     gene            complement(645..1064)
                     /locus_tag="CPT85_05985"
     CDS             complement(645..1064)
                     /locus_tag="CPT85_05985"
                     /inference="COORDINATES: protein motif:HMM:PF01047.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="DAB22605.1"
                     /translation="MALTSSAYRAAGQKTLKVHGQDDITREQFGILLVLSLTDGLYQT
                     QIANILGKDRPNITRMIDVLEKRGFIRREKDENNRRILKVFLTDAGLHKVEEAKPLKD
                     RMNAAQYKGMTDDEIYTLVTLLRKVRKNIEDEYNLNM"
     gene            1178..2566
                     /locus_tag="CPT85_05990"
     CDS             1178..2566
                     /locus_tag="CPT85_05990"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22606.1"
                     /translation="MLANIVKKIVCSVIIIPYLLNFPFSAATARADMVQTKIICRVNA
                     VNINWWDNFSDEYLKDYIYKALERNHDLRKAALKTEEYRELVKVTMSKEFPTLQFSPT
                     FARIKTAQNTIFDIETAALRSNLYVLPLFATYEADIFLKNHDKTKSKRKEYEAKQYEE
                     KAADIAMAADVASLYINILKLDKVIKTQEKVTKIREKIWLLTKDRHLAGLASVYDVTY
                     SDKLHTQAQINLTDLKRQRSLLLHRFAVYIDECPSQAGSLKRGSFDKLEFKGEIPDCI
                     SSDVVVSRPDLMKAEADLKKAKIDIRVARKEFLPTIPIFGSAGYNAMLLKDVFNWTNI
                     FGLVGVVAMQKLYTGGLLTANLKISKIKYEQLFEAYKQADLTAIQEINDSMCMIKFDT
                     QKDNANMKKLKLESHNFKLIEERYKAGIISYLDMIQFQETLLSLQTEKDNSKAQRLVD
                     YITLYKTTGAAL"
     gene            2638..5628
                     /locus_tag="CPT85_05995"
     CDS             2638..5628
                     /locus_tag="CPT85_05995"
                     /inference="COORDINATES: protein motif:HMM:PRK05755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="DAB22607.1"
                     /translation="MEKNNNAQSKTLILIDGHALAFRSFFALERTGMKTSDKEPTWAV
                     FGFFKAIFDLLKNQTISPDCIAVTFDVSHHTFRTECYEEYKANREQMPDTMKSQMALI
                     MEGLNAFNIPIYTKEGFEADDVIGTIVTKASKLGHKTVILTGDQDAFQLIDREGLVHV
                     LIPSKGELVNYGWNEVYNKLGIYPDQVIDYKALRGDTSDNIPGIRGIGEKTAVKLLDR
                     FQTLDNVLSHIEDVDGKSLKEKLTNGVEAAKMSYFLATIKRDVDIEFDFEKTKLDMPD
                     VDKVSEFLKRVQFFSFLKNLPDILRPFSVCSLASRPENIDSAELKKQQLMDQKLIDFI
                     SLKDGTRVEKIKEEPESKPKQPAQQQLGLFAAEDTPQENVSNCELVNERKTIVTKEHF
                     EKLLEELNKQTLIAIDTETTSVNALEADLVGISLAYNEEIQAKDSKVLQAQNKGKTKS
                     FYIPVFHKFGEQLEMEYVLQKLKDIFENPAIFKTFQNAKYEINTLLKYNIGFKGIIFD
                     TMLASYINDPSRKHGLKVQSAENLNYFMTEIEELIGKGKKQITMDDVAIEDASNYACD
                     DAFVTLELTRYWNEKLDEQSKKLLYDIEVPTSLVLAKMEEQGVALDTEYLAELAKELD
                     TNLKEMEEQIFALAGESFNINSPKQVATVLFEKMGIEHKKKRGAQKFSTDAKVLEELA
                     KEHEIARCLLKYRHYSKMKSTYVDALPDLISPMDGKIHTNYNQTITVTGRLSSSNPNL
                     QNIPVRTKLGSRIRKAFVPEDKNAQVLLSADYSQIELRLLAHCSGDENLIHAFKTGED
                     IHAQTAAKVFDVPLSEVTKEMRGRAKAVNFGIIYGQTRWGLASALGISNEEAQMFIDK
                     YFLTYPKVKEYMENSIQEAYRHGYAQTMYGRKRYLLDELMSSNRNIKEFAQRAAINTP
                     LQGAASDLIKLAMIDLDKKLEQNNLKSKMIMQVHDELILETCKDELETVQKLVKEAME
                     LNQPLKVPLVVDMEYGSSWMEDEE"
     gene            5628..6044
                     /locus_tag="CPT85_06000"
     CDS             5628..6044
                     /locus_tag="CPT85_06000"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22608.1"
                     /translation="MIKRFLACALLCVSISAVPAFSQDTIDKTYKQNAASYTNYKDCI
                     RLYKLPYEKLYYLALSSVNFNKYEIKEMQSRNGYIIFEAEGREFLLDILKKDKNYTFL
                     KLTPCDNNYYFNPQIPRKIYNYVDLHFNSEVKELKF"
     gene            6120..7652
                     /locus_tag="CPT85_06005"
     CDS             6120..7652
                     /locus_tag="CPT85_06005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018247910.1"
                     /note="catalyzes the interconversion of 2-phosphoglycerate
                     and 3-phosphoglycerate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate mutase
                     (2,3-diphosphoglycerate-independent)"
                     /protein_id="DAB22609.1"
                     /translation="MTDNKRVLLCIMDGWGINKDCPKDATKTAKTPNFDKLKETEKYT
                     QINASGEYVGLPDGQMGNSEVGHLNLGAGRVVYQDLTRINKEIREGKFFENKAFKDAI
                     EHVKKNDSSLHLYGLVSTGGVHSSFEHVKALVKMAAENGLKKVYVHAFLDGRDTPPKS
                     AVEFLAELEAELKKYNLPQIATISGRYWAMDRDNRWERVEKAYNALLFGEGEKAANSD
                     EAIKASYAKDVTDEFVEPTITNADPDSRIKDNDAIIFFNYRPDRAREITRAMTFEEFD
                     GFNRKARRNNLYYVCMAQYDETFPLPIAYPPEKLTNILGDVLDDNGVKQYRTAETEKY
                     AHITFFFNGGEEKSGKLETRALVASPKVATYDLQPEMSAPQVCENVLKALDDPQYGFI
                     LVNFANPDMVGHTGVFDAAIKACETVDTCVGKIVEKAKENGVVMLLTADHGNSECMED
                     PQTHTPFTAHTTNPVPFMLINGQGKYELKDTGALCDVAPTILQLLGIKQPAEMTGQSL
                     IK"
     gene            7768..8094
                     /locus_tag="CPT85_06010"
     CDS             7768..8094
                     /locus_tag="CPT85_06010"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22610.1"
                     /translation="MAINRVAVQTIIDTVPAKLRNAARAERQALIKETKKDPIAASFM
                     AAKGEIPFFNNNKLQSELGKLNNKLAADAYKADAANAFVQRQPHGSMIAESAERPVVH
                     ASMNLG"
     gene            8131..8976
                     /locus_tag="CPT85_06015"
     CDS             8131..8976
                     /locus_tag="CPT85_06015"
                     /inference="COORDINATES: protein motif:HMM:PF03599.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22611.1"
                     /translation="MQDNKLDLSFCIKEKIREINFHNLKIGGDKSFSFMTENNNTAHP
                     LFALEFLYSSNNIIEEISSPNKADIISVKFDIQDENFDENEIKEFLTKVEKIVNKPLI
                     LRGANNNDIDKKLLPLLAQSINQECIIAFADENTFENIVPSVVKNNHILVLRSPIDIN
                     LAKELNILSIDKGISPDRILIDPDMGGLGYGLDYGYSIIEKIRQAAFDGDTMLNMPVI
                     AFIGEESYRAKEAKSDTFAQNWGKFSERSVMWEISAASAMISAGANIVVLWNPKSIEV
                     LKGIV"
     gene            8976..10196
                     /locus_tag="CPT85_06020"
     CDS             8976..10196
                     /locus_tag="CPT85_06020"
                     /inference="COORDINATES: protein motif:HMM:PF04060.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22612.1"
                     /translation="MELTGLQIFKYLPAAKKAEGTNCKQCGSPTCMAYALKLAKKQTD
                     IEKCPHIPDELREKFCEASKIQQHTIKLSENLVTGGETVMFRHDKTFVNPTVIAIALD
                     AQDKEFDNKLEQIKNYEIERIGETFKVNAVYLMGSDIEQAKEKVEKTGIAVISDKQNY
                     VIVKGDNEKELIEKSKQTQDEGKKEIILELEYGKKSAAQVMEQLTYIRRSAILQRFEP
                     LTYPVMVRLPVEMNPIEACAAASLLICRYANVVVLNEFNEALLSTLFTLRQNIYTNPQ
                     KPLQVEAKVYEFNDPDKNAPVLLTTNFALTYFAVAGELESLPYGSYLVVTPSDGMSVL
                     TAWSADKFTADLVAKSVRDFELAKKVDTRKIIIPGLLSHMQHELQEAMPEWEIVSGTI
                     EACQIPEFLKQTEA"
     gene            complement(10197..10499)
                     /locus_tag="CPT85_06025"
     CDS             complement(10197..10499)
                     /locus_tag="CPT85_06025"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22613.1"
                     /translation="MSLINGIDTAPSNLKNAKNPQDLQKISIENMNNIFGKDSQEDLQ
                     KLIKNIDKKIDKKEYQMNDKFADYFVRVRNPEEIKVLKIQKQLYTELAAMFKDNNA"
BASE COUNT         3690 a         1952 c         1973 g         2898 t
ORIGIN      
        1 gttcaagtgc agcctgattc ataacagctt ccagcctttt taactcagcg tcagccactt
       61 tgtttttttc tttagaaaat actgcctgct gtgctgttgc atagtttgcc tttgccatat
      121 caaattttga ttttgcacgg tcatattcct gctgggatac agcacctttt tcgtataaat
      181 ttttatatct gtcatagtct tgctgggcaa ctttcatatc agtttgtgca gcatttctgt
      241 ctacaactgc agatttttgc ttatacaagg ccatttcgta agcagctttt gcctgttcat
      301 agcggacttt atagtctctg tcgtcaattg tcaaaagtaa cttgcctttt ttgacatggt
      361 cattatcatc aacataaagt ttttcaatga taccggtcac tttagggctg accctgatga
      421 tatgcccttc tacaaaagca tcatctgttg tttcgaaggt agaaaaatac atccaaccca
      481 gtaaacaaag taccagtatt aaaagagtag ggataagaaa tctctttttt acaacttttt
      541 tagttttttt gcctcttttg gatgattttt ccgtattatc tgacacagaa gccattgctt
      601 cttcgttttt attattctct tccattttat accgccttac ttagttacat atttaaattg
      661 tattcgtctt caatattttt acgtactttt cttaaaaggg tcaccagtgt atatatttca
      721 tcatctgtca ttcccttata ttgagctgca ttcattctgt cttttaaagg ttttgcctct
      781 tctactttgt gcagccctgc atctgtaaga aaaactttca aaattcttct gttgttttcg
      841 tccttttctc ttctgataaa gcctcttttt tctaaaacat ctatcattct tgtgatgttt
      901 ggacgatctt tgcctaatat attagctatc tgggtttgat acaatccgtc agtcagggac
      961 aaaacgagta atataccaaa ctgctcacgg gtgatatcat cctgtccatg gactttcaaa
     1021 gttttttggc ccgcagcacg ataagcagac gaagtcagcg ccatttctaa cccaagatca
     1081 atatctatat tatttattct cttcaatttt ctacctaaac tgttatcata acaacaattg
     1141 ctatgctaac atactaaatc aaaaaaggca ataagaaatg cttgctaata ttgttaaaaa
     1201 gattgtttgt tcagtaatca ttataccata tctgctgaat tttccttttt ccgccgcaac
     1261 cgccagggca gatatggtgc agacaaaaat catatgccgt gtcaatgcgg taaacattaa
     1321 ctggtgggat aatttctctg atgaatattt aaaagattat atatataagg cgctggaaag
     1381 aaaccacgac ttaagaaaag cagcactaaa aacagaagag tacagagagc tggtcaaagt
     1441 tacgatgtca aaagagtttc ccactttaca gttttctccg acatttgcaa gaataaaaac
     1501 agcacaaaat acaatttttg atatagaaac agcagctctt cgatccaacc tttatgtttt
     1561 gcctttgttt gcaacatatg aggctgatat ttttttaaag aatcacgaca aaacaaaatc
     1621 aaagcgaaaa gaatacgaag caaaacaata tgaagaaaaa gctgctgata ttgcaatggc
     1681 agccgatgta gcatctttgt acataaacat tttaaagctt gataaagtaa tcaaaacaca
     1741 ggaaaaagta actaagatta gggaaaaaat ttggctttta acaaaggaca ggcaccttgc
     1801 aggccttgct tctgtgtatg atgtaacata ctcagacaaa ctacacaccc aggcacagat
     1861 aaatcttaca gatttaaaaa gacagcgcag tctgctactg cacaggtttg ctgtgtatat
     1921 tgacgagtgt ccttcacagg caggttctct aaaacgcggc agctttgaca aattagagtt
     1981 taaaggagaa attcctgatt gcatctcatc tgatgttgtt gtctcaagac ctgaccttat
     2041 gaaggctgaa gcggatttaa aaaaagcaaa aatcgacata agggtggctc gaaaagaatt
     2101 tttaccaaca attccaattt ttggctctgc cggttataac gcaatgcttt taaaagatgt
     2161 tttcaactgg acaaatattt ttgggcttgt tggtgttgtg gcaatgcaaa aactctatac
     2221 aggagggctg ctcactgcaa atttaaaaat aagcaaaatc aaatatgaac agctgttcga
     2281 agcttataaa caggccgatt taacagcaat acaggaaata aacgattcta tgtgtatgat
     2341 aaaatttgac acccaaaaag ataatgcaaa tatgaaaaag ttaaagcttg aatcgcataa
     2401 ttttaaactt attgaagaaa gatacaaagc aggaatcatt tcttaccttg atatgataca
     2461 gtttcaagaa actttattaa gtcttcaaac agaaaaagat aactccaagg ctcaacgcct
     2521 tgttgattac ataaccctgt acaaaacaac aggagctgcc ttataagcag cattttagat
     2581 agcattttag gtttgaatat gataatattt ttttatacat aagaatggat aggggatatg
     2641 gaaaaaaata ataacgcaca gagcaagaca ttgattttaa ttgacggaca cgcactggcg
     2701 tttcgaagtt tttttgcact tgaaagaaca ggaatgaaaa cgtccgacaa agagccaacc
     2761 tgggcggtat tcggattttt taaagctatt tttgatttgc tcaaaaacca gaccataagc
     2821 cctgactgca ttgccgtaac ctttgatgtc agccatcata ctttcagaac ggaatgctat
     2881 gaagaatata aagccaacag agagcaaatg cccgatacaa tgaaaagcca gatggctttg
     2941 attatggaag gattaaacgc tttcaacata cctatttata caaaagaagg ttttgaagcg
     3001 gatgatgtaa ttggaacaat tgtgacaaaa gcctccaaac tggggcacaa aacagtgatt
     3061 ctgacaggtg atcaggatgc atttcagcta attgacagag aaggccttgt tcatgtactt
     3121 atcccgtcta aaggagagct tgtaaactac ggatggaatg aggtgtataa caaactgggc
     3181 atttatccgg atcaggtaat cgattacaaa gcactgagag gcgacacctc tgataacatc
     3241 ccaggtatta gaggaatcgg agaaaaaact gctgtcaagc tgctggatcg ttttcaaact
     3301 cttgataatg tgctttctca catagaagat gtggatggaa aatcccttaa agaaaagctt
     3361 acaaacggcg tagaagctgc aaaaatgagc tattttcttg caacaataaa acgcgatgtt
     3421 gatatagagt ttgactttga aaaaacaaag ctggacatgc cggatgtaga caaagtgagc
     3481 gaatttttaa aacgagttca atttttcagt ttcttaaaaa atcttccgga tatactccgt
     3541 cccttcagtg tctgttctct tgcgtcgcgt ccggagaata tagattctgc agagcttaaa
     3601 aaacaacagt taatggacca gaaacttatt gattttataa gccttaaaga cggaacaaga
     3661 gtagaaaaaa taaaagaaga accggaatca aaacccaaac aacccgccca gcagcagctc
     3721 ggtctttttg cagcagaaga cacaccacag gagaatgtct caaactgtga gcttgtgaat
     3781 gaaagaaaaa caattgttac aaaagaacac tttgaaaaac tgctggaaga gctcaacaaa
     3841 caaacactca ttgctattga cacagaaaca acatctgtta atgctcttga agcagacctt
     3901 gtagggattt ctctggctta taatgaagaa atacaggcaa aagattccaa agtattacag
     3961 gcccaaaaca agggtaagac taaatcgttt tatataccgg tattccataa atttggtgaa
     4021 cagctggaaa tggaatatgt acttcaaaag ctcaaggata tctttgaaaa tcctgcaata
     4081 tttaaaactt tccagaatgc aaaatatgaa attaatacac ttttaaaata caacataggt
     4141 tttaaaggta ttatttttga taccatgctt gcaagctaca taaatgaccc gtcaagaaaa
     4201 cacgggttga aagtccaatc tgccgaaaat ctcaactatt ttatgacaga aatagaagag
     4261 ctgataggca aggggaaaaa acagattaca atggatgatg tggcaattga agacgcatca
     4321 aactatgcct gtgacgacgc atttgtaaca cttgaattaa caagatactg gaatgaaaaa
     4381 ctcgacgaac agagcaaaaa gcttttgtat gacatagaag ttccaacaag ccttgtactt
     4441 gcaaaaatgg aagagcaggg tgtggcttta gacacagagt atctggctga actagcaaaa
     4501 gagcttgata ccaacttaaa agagatggaa gaacaaatat ttgctcttgc gggagaaagt
     4561 tttaacatta attcacccaa acaggttgct actgttttgt tcgaaaaaat gggcattgaa
     4621 cataagaaaa aacgcggtgc gcaaaaattt tcaacagacg caaaagtact tgaagagctg
     4681 gcaaaagagc acgaaattgc acgctgcttg ttaaaatatc gccactattc aaaaatgaaa
     4741 tccacatacg tggatgcgct gcccgatttg ataagcccaa tggatggaaa aatccacaca
     4801 aattacaacc agaccattac agtgacagga aggttatcat cttctaatcc aaatttacag
     4861 aatattccgg taagaacaaa actgggcagc cgtataagaa aagcctttgt acccgaagat
     4921 aaaaatgcac aggtgctttt gtctgcggat tattctcaga tagagctcag gcttctggct
     4981 cattgctcgg gtgacgaaaa tcttatccac gcatttaaaa caggagaaga tatccacgca
     5041 caaacagcag caaaagtatt tgatgtgccg ttgagcgaag tcacaaaaga aatgagaggc
     5101 agagcaaaag cggtaaactt cggtataatc tacggacaaa cacgctgggg acttgcttct
     5161 gcactcggaa tttcaaacga agaagcacag atgtttattg acaaatactt tttgacctat
     5221 cccaaggtta aagagtatat ggaaaactca attcaagaag catatcgcca cggctatgca
     5281 cagaccatgt acggaagaaa acgatatcta cttgatgagt tgatgagctc taacagaaat
     5341 attaaagaat ttgcacaaag agctgcaatc aacacacctt tgcagggtgc cgcttctgac
     5401 cttataaaac tggcaatgat tgaccttgat aagaagcttg aacagaataa tttaaaatca
     5461 aaaatgatta tgcaagttca cgatgaattg attttagaaa cctgcaaaga tgagcttgaa
     5521 acagtacaaa aactcgtgaa agaagcaatg gagctcaatc agccgcttaa ggttcctctt
     5581 gttgtagata tggaatacgg ctcttcctgg atggaggatg aagaataatg ataaaaagat
     5641 ttcttgcctg tgcgctttta tgtgtatcaa tatcagccgt tccagctttt tctcaagata
     5701 caatagacaa aacttacaaa caaaatgcag cttcttacac aaattacaag gactgtatca
     5761 ggctatacaa actgccgtat gaaaaacttt attatctggc attgtctagt gtaaatttca
     5821 acaagtacga aataaaagag atgcaatcac gtaacggata cataattttt gaagcggaag
     5881 gaagagagtt tttgctcgat attttaaaaa aggataagaa ttacacgttc ttaaaactca
     5941 ccccttgtga caacaactat tatttcaacc ctcaaatacc acgaaaaata tacaattacg
     6001 ttgatttaca ttttaacagc gaagtaaaag agctgaagtt ttaacctgag taagctactt
     6061 taagtttttc ctttagcgtt gataatataa ttaaccgaaa caaataaaaa ggagaaacta
     6121 tgacagataa caaaagagtc cttttatgca ttatggacgg atggggaatc aataaagact
     6181 gccctaaaga tgcaacaaaa acagcaaaaa cacccaactt tgacaaactg aaagaaacag
     6241 aaaaatacac tcaaattaat gcttcaggtg aatatgtcgg tcttcctgac ggacaaatgg
     6301 gcaacagcga agtaggccac ctcaatctgg gagcaggtcg tgttgtttat caagatttaa
     6361 caagaatcaa caaagaaatc agagaaggaa aattcttcga aaataaagct tttaaagacg
     6421 ctatcgaaca cgttaaaaag aatgactctt cactccacct ttacggactt gtttctacag
     6481 gcggtgtgca cagctctttt gaacatgtaa aagcactcgt taaaatggca gcagaaaacg
     6541 gccttaaaaa agtatacgtt catgcattct tagacggaag agacacacca cctaaaagtg
     6601 ctgttgaatt tttggcagaa cttgaagcag aacttaaaaa atacaatctt cctcaaatag
     6661 ctacaatatc aggcagatac tgggctatgg acagagataa cagatgggaa agagtcgaaa
     6721 aagcatacaa tgcgcttttg tttggcgaag gagaaaaagc agcaaactct gatgaagcaa
     6781 tcaaagcttc ttatgcaaaa gacgtgacag atgagtttgt agaaccaaca atcacaaatg
     6841 ctgaccctga ttcaagaatc aaagacaatg atgcaataat tttcttcaac tacagacctg
     6901 acagagctcg cgaaattaca cgtgctatga cgtttgaaga attcgacgga ttcaacagaa
     6961 aagcaagaag aaataatcta tactatgtct gcatggctca gtatgacgaa acattcccgc
     7021 ttcctattgc ttacccgccg gaaaaactta caaatattct cggtgatgtg cttgatgaca
     7081 acggtgtgaa acaatacaga actgctgaaa cagaaaaata tgcacacatc actttctttt
     7141 tcaacggtgg tgaggaaaaa tcaggaaaac tggaaacaag agcacttgtg gcttctccca
     7201 aagttgcaac ttatgacctt caaccagaga tgagtgcacc tcaagtttgt gaaaacgttt
     7261 taaaagcact ggacgatcct caatacggat ttatccttgt aaactttgca aaccctgata
     7321 tggtaggtca cacaggcgta tttgatgcag caatcaaagc ttgcgaaaca gtagatacct
     7381 gtgttggcaa aattgttgaa aaagcaaaag aaaacggtgt tgtaatgctt ttaacagcag
     7441 accacggcaa ctctgaatgc atggaagacc cgcaaacaca cacacctttt actgctcaca
     7501 caacaaatcc tgttccgttt atgcttatta acggccaggg caaatacgag ctcaaagaca
     7561 caggtgcact gtgtgacgta gctccaacaa tccttcaact actgggaata aaacaaccgg
     7621 cagaaatgac aggccaaagc ttaataaaat aattactcat tctttaataa gaattgtaaa
     7681 tattaaattt aaaaagcgtc aaaataaaaa cttgacgctt tttagtccca ataaacatca
     7741 acaaatttct aacaaaagga gaaaaaaatg gcaatcaaca gagtagcggt tcaaacaatc
     7801 attgatactg ttcccgcaaa acttagaaac gcagcaagag ctgagagaca agctttaatc
     7861 aaagaaacta aaaaagaccc gattgcagca tctttcatgg cagcaaaagg tgaaattcct
     7921 ttctttaata acaacaaatt acaatcagaa ttaggtaaat tgaacaacaa actcgcagct
     7981 gatgcataca aggcagacgc ggctaatgca tttgttcaaa gacagccaca cggctctatg
     8041 attgcagaat cagcagaacg acctgttgtt cacgcaagca tgaacttagg ttaatttgac
     8101 aataaaccgt ttacttttta agataggtct atgcaagata ataagctaga cctttctttt
     8161 tgtataaaag aaaaaataag agagattaat ttccacaatt taaaaattgg cggtgacaag
     8221 tcattttcat ttatgacaga aaacaataat acagcacacc cgctttttgc tcttgagttt
     8281 ttgtattctt caaacaacat tattgaagaa atttcatcac ctaacaaagc agacataatc
     8341 tctgttaaat ttgatattca agatgaaaac tttgatgaaa atgaaataaa agaattttta
     8401 acaaaggtag aaaaaattgt aaacaagcct ctcattttac gaggagcaaa caacaatgac
     8461 atagacaaaa aactcctgcc tttactcgct caatcaataa atcaggaatg tattatagct
     8521 tttgcagacg aaaatacatt tgaaaacatc gttccatcag ttgtaaaaaa taaccatata
     8581 ctggttttaa gaagcccgat tgacataaat cttgcaaaag agctcaacat tctgtcaatt
     8641 gataaaggaa tatctccgga cagaatttta attgaccctg atatgggcgg cctgggctac
     8701 gggttggatt atggctacag tattatagaa aaaatcagac aagctgcgtt tgacggtgac
     8761 acaatgctca atatgccggt tatagctttt atcggagagg aatcttacag agcaaaagag
     8821 gcaaaatctg acacttttgc acaaaattgg ggcaaattta gcgagcgttc tgttatgtgg
     8881 gaaatatcgg ccgcaagtgc aatgattagc gccggtgcaa atattgttgt actgtggaac
     8941 ccgaagagca ttgaagtgtt gaagggaatt gtgtagtgga gttaacaggt ttacaaattt
     9001 ttaaatacct gcctgcagca aaaaaagcag aaggcacaaa ctgcaaacag tgcggcagcc
     9061 cgacttgtat ggcttatgca ctcaagctgg caaaaaaaca aaccgatatt gaaaaatgcc
     9121 cgcacatacc ggatgagcta agagaaaagt tttgcgaagc gtcaaaaatt caacaacata
     9181 caataaaact gtccgaaaat ttggttaccg gcggcgaaac agtaatgttt agacatgaca
     9241 aaacatttgt aaaccccaca gtaatagcaa ttgcactgga tgctcaagac aaggagtttg
     9301 acaataaact cgaacaaatt aaaaactacg agattgaaag aattggcgaa acatttaaag
     9361 ttaatgctgt ttatttgatg ggttcagata ttgaacaggc aaaagaaaag gttgaaaaaa
     9421 caggcattgc cgttatttca gataaacaaa actacgttat tgttaaaggc gacaatgaaa
     9481 aagagctgat tgaaaaatca aaacaaactc aagatgaggg caaaaaagaa ataattcttg
     9541 agctggaata cggcaaaaaa tctgctgcac aggttatgga acagcttacg tatataagac
     9601 gctcagccat tctacaaaga tttgaaccgc ttacataccc tgttatggtg cgccttcctg
     9661 ttgaaatgaa tccaatcgaa gcctgtgccg ctgcatcgct tttaatttgc agatacgcga
     9721 atgttgttgt gctcaatgag tttaatgaag ccctgctttc cactttattt acattgcgcc
     9781 agaatattta tacaaacccg caaaagccac tgcaggtaga agccaaggtt tatgaattta
     9841 atgacccgga taagaatgca cctgtgttgc tcacaacaaa ttttgcgctc acatatttcg
     9901 ctgtagcggg cgagttagag tctctgcctt acggctctta tcttgttgtt acaccatctg
     9961 acgggatgag tgttttaaca gcttggtcag ctgacaagtt tactgcagat ctggtagcaa
    10021 agtctgtcag agattttgaa cttgctaaaa aggtagatac aagaaaaatt attatccccg
    10081 gactgttgtc acacatgcag catgagctgc aagaagcaat gcctgaatgg gaaattgttt
    10141 caggcactat agaagcctgc cagattccgg agtttttaaa acagacagaa gcctagctag
    10201 gcattgttgt ccttaaacat tgcagccaat tctgtataaa gctgtttttg aattttcaaa
    10261 accttaattt cctcaggatt tcttaccctt acaaaataat ctgcaaattt gtcattcatt
    10321 tgatattctt ttttgtctat ttttttatca atatttttga ttaatttttg caagtcttct
    10381 tgagaatctt taccaaaaat attgttcata ttctctatcg aaattttttg taaatcttgc
    10441 ggattttttg cattttttag atttgacggg gctgtatcaa tgccgttaat caatgacatc
    10501 aggggtttag tca
//
LOCUS       DABS01000139            9516 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13140, whole genome shotgun sequence.
ACCESSION   DABS01000139 DABS01000000
VERSION     DABS01000139.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 9516)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 9516)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9516
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(27..1397)
                     /locus_tag="CPT85_06030"
     CDS             complement(27..1397)
                     /locus_tag="CPT85_06030"
                     /inference="COORDINATES: protein motif:HMM:PRK00149.3-5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="DAB22583.1"
                     /translation="MSQENIIEVWNAVLEILEKQISESTLTTWIHPLEPQYYDETSFV
                     LHTGQAFAVNLLRKNHYNEIAQAVKSVTQKDLEIKIXLAKKISKKSKAKSTALQNEEQ
                     PQKLKYDSLTQMQSSNLNLKYKFENFVVGSNNKLAYVAAQTVAQHPGTKYNPLYIYGG
                     PGLGKTHVMQAIGHYIIKNRPDLKVLFITAEEFVNDVVNALARGDEKTKNMNRFRKKY
                     REVDVLLIDDIQLIAGKTRTEEEVFNTFNTLHGAGKQIVLTSDRTPKEIPSLSDRLIS
                     RFEWGLMADIQVPDIETRMAILQNLAKDTNIEVPNNIIEFLASTYASNIRELEGAFNR
                     VTAYASINETPLTIENVKRIIGYNEKEKTYTFDGIVDEVASFYNISPNEIKGSGRSAK
                     VSEARQVSIYLCRELTKQSFPAIGEYFEKKHTTILYSYDKIKEELRTNLGLAHNVELI
                     SKQMNK"
     assembly_gap    1156..1157
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1440..1805)
                     /locus_tag="CPT85_06035"
     CDS             complement(1440..1805)
                     /locus_tag="CPT85_06035"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22584.1"
                     /translation="MTATDSLYGQEAYLKVGNYHCNIFEAINEAKDYISRNDCPFLCI
                     DISGLNLIDALKMCVLSSTFHYAKYCKGEIKWFVKDTCIKEQIELLKLDNVSIEIKRK
                     KRNAADFSKDFVRNFSICK"
     gene            complement(1897..3819)
                     /locus_tag="CPT85_06040"
                     /pseudo
     CDS             complement(1897..3819)
                     /locus_tag="CPT85_06040"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1972..1981
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2172..2186
                     /estimated_length=15
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2722..2735
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4023..5021)
                     /locus_tag="CPT85_06045"
     CDS             complement(4023..5021)
                     /locus_tag="CPT85_06045"
                     /inference="COORDINATES: protein motif:HMM:PF01075.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22585.1"
                     /translation="MTVPFLRNLRYAYPDAQIDLMIAPVSGEIIDKCPYVDNFIYFDT
                     TKKHRYENKEGQSKKDFLYYVKYLRAQKYDKAYVLKRSLSSAFLAFAAGIKQRIGFNT
                     ECRSFLLTKSVPYIEDRHEIECFLDVLRADKIMPKDNYLENWVTQQETEQVKAEMVNQ
                     GINFDNGLKRVIIHATSGNRKKEWAKDKWAEIIKWLANEKNVQVVFNGTKNDSATYEE
                     IMSFVTEDLKIQPINFCGKFSLRHTLAFTQLCDLIAGCDSGNLHIAASVNVPAIGIYG
                     PMNTEKWRAFEENSAIIKTDLPCQPCGLKKKCKRDYQCIKDISVEDVKTQIEKYLQ"
     assembly_gap    5032..5038
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5069..6133)
                     /gene="lpxK"
                     /locus_tag="CPT85_06050"
     CDS             complement(5069..6133)
                     /gene="lpxK"
                     /locus_tag="CPT85_06050"
                     /inference="COORDINATES: protein motif:HMM:PF02606.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="DAB22586.1"
                     /translation="MKVFLTNFHYKKHFTPVQMIMAGVLYAVLSLPSLVYLCIVKTRN
                     FLYKKNLLKSYKPHLYTVSVGNLTTGGTGKTPITAEIANYFAKKGDYPAILSRGYGGQ
                     LPNKDVNVVSDGLTIHHNALEAGDEPYWLASHCPKCAVLTCSSRVKAAKFAKNSLHCT
                     KLILDDGFQHQKIGRDLNILVTDSEKQFSNGCVLPLGALREPLSEIKRADKIVVVNKS
                     FNDKKAKSFARYLRKKYNKPTFVCSMVPDIVYNIKTEKLIEDDAPVIAFSAIAQPEQF
                     YKFLRRYDVLDTKDFSDHHIYTKDDVEELKALKEKYGAKYMITTEKDAVKLKEILDTD
                     EGIFALKLKPVLDLKGLLDE"
     gene            complement(6154..7434)
                     /locus_tag="CPT85_06055"
     CDS             complement(6154..7434)
                     /locus_tag="CPT85_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019988239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="DAB22587.1"
                     /translation="MDRFVGIIGIVLILGIAYAFSNNRKAISLKTIIPGFVLQVLLAV
                     FVLKTPLGKNMFHAIGMFIQKILDFSNEGGNFVFGVLTNNPVKMEELFGAGAGFIFAL
                     KLIPTIIFILILVNILYYYGIMQRVVEACAKVMYKLMNVSGAESLSNIASAFVGQVEA
                     QIMIKPYLATMTMSELLASMTGSMACIAGGVMAMYVGMGIPAEYLLAASIMAAPGALV
                     ISKIVYPETDEPQTKNDVKIEIKKTHVXLIDSIAHGASDGMKVSINVIAMLIALTALI
                     SMVDWMLGHLGLFMANVLHMNLSFIHIDLTHLSLKEILGSIFSLFAVAMGVPFKEAMD
                     VGALMGTKLVFNEFIAYLDLTALKPVLSQKSIVVATFALCGFANLGSIAIQIGGIGEL
                     APNRRKDLAKLGVKALFCGTLASYLSACIAGILL"
     assembly_gap    6697..6698
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7607..7954
                     /locus_tag="CPT85_06060"
     CDS             7607..7954
                     /locus_tag="CPT85_06060"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22588.1"
                     /translation="MTNPVSMQGQQNYSYYQPLKAGHFVVNPPVIRPHSFYDEIKVDK
                     EFYNELINPKSKAFFHKPVAMKTQKPKNRLKRLLTWTAIIAGAIVCYAKRNLIKTFIT
                     NTYDKIKNHIKRK"
     gene            7956..8735
                     /locus_tag="CPT85_06065"
     CDS             7956..8735
                     /locus_tag="CPT85_06065"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22589.1"
                     /translation="MDTNSKQNKSNKQNNTAAQNGANPLDKKDFFQLTKQQLSVNIEK
                     YETVLKTPPVTIFNTKQIDDKKLQERPVVFQKRINSTDSAMLEESAYIALDDQELKLE
                     KRIESYENSLSQINEKIVVAQTINDEKAIKELLSGKKLIERNLANLQQQYQQQNFETG
                     LTSALTKAMNFPQKMKENFQKAFKSFLRRSKFLRKYTPLVKAMMVKDTLGKLDKINKS
                     VDELVKMKVPFGEQEERYETLVNHLSRAGALHSQILKELNG"
     gene            complement(8724..>9516)
                     /locus_tag="CPT85_06070"
     CDS             complement(8724..>9516)
                     /locus_tag="CPT85_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_846213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="DAB22590.1"
                     /translation="KAFYASRYDKGEASYINCPMNKEEYENFYRILTTAPKIELKEFE
                     KDAKFFESCLPIEVLASRGVDTLRFGPMKPVGLVDKRTGVENYAVVQLRQDNRSATMY
                     NLVGFQTNLKWGSQKELLQAIPGLENANILRYGVMHRNTFINSPQLLEPSLQCRTRKD
                     LFFAGQLTGTEGYTESIATGMLAGINMARFLKGEALLVLPDITMLGALTHYICDCEQK
                     HFQPINSNWGIVAELNVDRKIKKNKKLKNELLSNRSLEYLRNLSV"
BASE COUNT         2840 a         1908 c         1669 g         3049 t
ORIGIN      
        1 aaattcatta tgagtttccc ttttttttat ttattcatct gtttggaaat caattcaaca
       61 ttatgagcaa gcccgagatt tgttctgagc tcctctttta ttttgtcata agagtagagt
      121 attgttgtgt gtttcttttc aaaatactcg cctattgcag gaaagctctg ttttgtaagt
      181 tctctgcaaa ggtaaataga tacctgtctt gcttcagaga cttttgcact gcggccagag
      241 ccttttattt catttggtga aatattataa aaagatgcta cctcatcgac tatgccgtca
      301 aatgtgtatg ttttttcttt ttcattataa ccgattattc gttttacatt ctctattgta
      361 agaggagttt cgtttatact tgcgtacgct gttacacggt taaatgcccc ttccagctca
      421 cggatattgc ttgcataagt agaagcgaga aactcgatta tgttatttgg cacctcgata
      481 tttgtatctt tggcaaggtt ctgtaatatc gccattcttg tttcgatatc aggaacctgt
      541 atatctgcca taagacccca ttcaaaacga ctgataagcc tgtctgacag agaaggaatc
      601 tctttgggtg ttctgtctga tgttagtaca atttgttttc ccgcaccgtg aagagtattg
      661 aatgtattaa aaacctcttc ttcagttctt gttttgccgg caataagctg gatatcgtca
      721 attaaaagta catccacttc gcgatatttt ttgcggaacc tgttcatgtt tttagttttt
      781 tcgtcacccc ttgcgagcgc attaactacg tcattaacaa actcctcggc ggtaataaaa
      841 agcaccttta agtcaggtct attttttata atataatggc caatcgcctg cataacgtgt
      901 gttttgccaa gccccggacc tccataaata tacaaaggat tgtattttgt gccggggtgt
      961 tgagctacag tttgtgcagc tacataagcc agcttgttat tagaacccac aacaaagttt
     1021 tcaaatttat acttcaagtt taaatttgat gactgcattt gtgtaaggct gtcatacttg
     1081 agtttttggg gctgttcttc gttttgtagt gctgttgatt ttgcttttga ttttttagat
     1141 attttttttg ccagcnnaat ttttatctca agatcttttt gtgtaacaga cttaacggct
     1201 tgagcaattt cattgtaatg atttttacga agcaaattaa cagcaaaagc ctgccctgta
     1261 tgcagaacaa agctggtttc gtcataatat tgcggttcca aagggtgtat ccaggttgtc
     1321 aaagtagatt cggagatttg tttctccaaa atttctaaaa ccgcattcca aacttctata
     1381 atattttcct gactcatgtt tcttatctta caacaaaaag actcaaagtc atataaaggc
     1441 tatttgcaga tactgaaatt tcttacaaaa tcttttgaaa aatcagcagc atttcttttt
     1501 ttgcgtttaa tttcaatgct gacattatca agttttaaga gttcaatctg ttcttttata
     1561 caagtgtctt tgacaaacca ttttatttca cctttgcagt attttgcata gtgaaaagtc
     1621 gaagacaata cacacatttt taaagcgtca ataagattta gccctgaaat atctatgcac
     1681 aaaaaagggc aatcgtttct tgagatataa tcctttgcct catttattgc ctcaaaaata
     1741 ttgcagtggt agttacctac ttttagataa gcttcttgtc cgtataatga gtctgttgca
     1801 gtcataaatt ctcttattat atccgtcttc ttatgtgtat actgtaggga aaatgctaat
     1861 gtttacaaat aatataacga tacaatttcc aaaaaattaa actataggat aaaaactaca
     1921 tcttttgtat gagaatgtaa atatataagg gtttgaacac ataaaaaaaa annnnnnnnn
     1981 nactgtttta aaaaaactat ttttaccatt gtataaatac aagaccggaa gcaccctgac
     2041 cgccgttgcc tgcactataa tttgatgagg tttcgacagt aactgtaccg ccaccgccac
     2101 cggcacccgc accataaata ttgttaaacc ctgagacagc ttcaccgttt cggaacatgg
     2161 tttgtgttgc annnnnnnnn nnnnnncatt gccttcaaac aatccgccca gaccgcctgt
     2221 accagttttt ttattagtca aaacgtttga caatataccg tttccgccaa caggcatacc
     2281 tgcatcgtta taatctgatg aatatgtttc atcatcattt ggcacaacca ttggcgcccc
     2341 tgtaccttgc aaaacatggg atccgttttt aatgtaagaa gattgcccct cagaacctgc
     2401 ggtgacttcg ttattacgat aactgcttcc gccaatacca attgactttc tgacattggg
     2461 tgcaccttgt ccgcccttgc cgcctttgcc cgggaacaga agtgtttttt gaggcatttc
     2521 cgcatatgga agctgcagca cactaccggc attgccgcct ttacctgcaa aaacttcaat
     2581 atatttgtat gccactacac cgctgcctcc attacgaata ccggattcat aatatttgca
     2641 tgccccgtcg tctacttcac ctgctgagcc ggaggcaaaa ggggtctctt ggttttctga
     2701 accagaaata ccaaattctt cnnnnnnnnn nnnnngaagt gcattcaacc cgccttgctt
     2761 tgcatatgta ctaaacaatt tgtcagaagg cttaaccgcc atacaattga aattattttt
     2821 accaaatgtc tttatattcc aattttcatc aagtgtataa gcccctattc tttcatgttc
     2881 ataccaggtg gggatatgtg tttctacttt ggcacggtta attgtaaaac ctttataggc
     2941 atacccgccc ggagcccctg aacgagcagc cgcttgtatg ggcccttgtt ggttttctcc
     3001 cacctgtctt gagacattac cttttgaaac ataatttgac tgtacaaaac ccgaacctgc
     3061 tgatgtagta taactggttt tgtaatagag ccagtttgga tcttcattgt aatccatggt
     3121 aaaaccaccg cctccgccct gcgcaatgat tgtggaattg tctttatcat tgagtcttac
     3181 ggaagaatcg ccaccgtcat aacctgcgtg tgcaccaata tttgcaccgc tgccgccagc
     3241 tccgattaca acgtttacct gtgtgccttt gggtaagaat ttgtaatttg atacaacaac
     3301 agcacctgga gaccctgtac cggaacaagc ccatccggtt tttgcattgt agcagttgct
     3361 ctttctcatc cacacagagc cgccgctgcc tccggcaccg gctacaagaa attgataata
     3421 cgccggttct tcaatagttt ttgttgtatt ttgggtaaac atgcgagaac cagtcataat
     3481 tccggcgccg gcaccaccac cgcctccgcc gactattgtt gctacaaagt ttttggcatt
     3541 ggtcggagga ttaaattcgc agccataacg ctgttcttcg gaatcaaaga caacttttcc
     3601 atctgattcc tgtccgttta tgatatattt tgctacgaga ttatcaccat tccagtaaca
     3661 ggcatataca ccgtgcggaa gattaatcct tgctttgtgt ttttttgtaa ttaccggagc
     3721 ggaagctatt gcaataacac atattaccaa cagtgttatc aatgcctctg caagtgaaaa
     3781 cgcatttgtt gcgacgatag cattttttgt ttttttcatt tgttctcctt tggcgttatg
     3841 actatgatat aacttgagtc ggcacgttat aaagagaact tgacattatc caccgtcact
     3901 tatcttatct tacagaaaag cttacgtggt ctgattttta gggtcaagaa attcgacttt
     3961 acattaatta acatttgtga atttcggtaa tatttgttta catttttaga tgttgaaaat
     4021 ctttattgca aatatttttc tatttgagtt tttacatctt caacagaaat atcttttatg
     4081 cattggtaat ctcttttgca ttttttcttt aagccgcaag gttgacaggg gaggtctgtt
     4141 tttataattg cggaattttc ttcaaaagcc cgccattttt cagtattcat agggccataa
     4201 atccctattg caggcacatt tacagaagca gctatgtgaa gattcccgct gtcacaaccg
     4261 gcgattaggt cacacaactg tgtgaaagca agagtatggc gcaaagaaaa ctttccgcaa
     4321 aagtttattg gttgtatttt caagtcttct gtcacaaaag acataatttc ttcataagtt
     4381 gcagaatcgt tttttgttcc attaaaaact acctgcacat tcttttcgtt ggccagccat
     4441 ttaataattt cagcccattt atcctttgcc cactcttttt tgcggtttcc gcttgttgca
     4501 tggataatca ctctttttag cccgttgtca aagtttatgc cctggtttac catttcagct
     4561 ttaacttgtt cagtttcttg ctgtgtaacc cagttttcca gatagttgtc ttttggcata
     4621 atcttgtctg ctcttaacac atctaaaaag cactctattt cgtgcctgtc ttctatgtat
     4681 ggcacgcttt ttgtcagaag aaagcttctg cactctgtat taaagcctat tctttgtttt
     4741 atccccgcag caaaagcaag aaatgcgctg gacaaagaac gtttgagaac atatgcttta
     4801 tcgtattttt gtgcacgaag atattttaca tagtataaaa agtctttttt gctttgacct
     4861 tccttatttt cgtatcggtg tttttttgtt gtgtcaaaat agataaaatt atccacatac
     4921 gggcatttat caataatttc tccggacaca ggcgcaatca taaggtctat ttgagcatca
     4981 ggatatgcat agcgaagatt tctcaaaaag ggtactgtca aaattgtatc gnnnnnnnat
     5041 tacaagaatc ttttgttttt tattatcctt attcatcaag caggcctttc aaatctagga
     5101 cgggtttgag ttttagtgca aagatacctt catcagtgtc cagtatttct ttgagtttta
     5161 cagcatcttt ttccgtggta atcatatatt ttgcaccata tttttctttc agtgctttca
     5221 attcttctac atcatctttt gtataaatat gatggtcgga aaagtctttt gtatcaagga
     5281 catcatatct tcgtaaaaac ttgtaaaact gttccggctg ggctattgcg ctaaaagcaa
     5341 taacaggagc atcgtcttct atgagttttt cggttttaat gttataaaca atatcaggca
     5401 ccatagaaca aacaaaagtc ggtttgttgt atttttttct taagtacctt gcaaaacttt
     5461 ttgctttctt gtcattaaag cttttattga ccactacgat tttatcagct ctttttattt
     5521 cagacagggg ttctcttaat gcgcccagag gcaatacaca cccgttagaa aattgctttt
     5581 cactgtctgt aacgagaata ttgaggtcac ggcctatttt ttggtgctga aaaccatcat
     5641 caagtataag ttttgtacaa tgcagagagt tttttgcaaa ttttgctgcc ttaacacggc
     5701 tggagcaagt caaaacagca catttagggc aatgagaggc aagccagtat ggttcatcgc
     5761 ccgcttccag agcattgtga tggattgtga gcccatcaga tacaacatta acgtctttat
     5821 taggcagctg tccgccgtag cctcttgaaa ggatagcagg atagtcgcct ttttttgcaa
     5881 aataatttgc aatctcggca gtaatcggcg ttttgcctgt tcctcctgta gtcaaatttc
     5941 ctactgaaac tgtataaaga tgaggtttat aagattttag gagatttttt ttgtaaagaa
     6001 agtttcttgt tttaacaatg caaagataaa caagagacgg caatgacaaa acagcataca
     6061 aaacacctgc cataatcatt tgtacaggtg taaagtgttt tttataatga aaatttgtta
     6121 aaaatacttt cattgtcaaa gccttatttt aagttagagc aaaatccccg caatgcatgc
     6181 tgaaagatac gatgccagag taccgcaaaa cagtgctttt acaccaagtt ttgcaagatc
     6241 ttttcttctg ttaggagcaa gttctccaat accgccgatt tgaattgcaa tagaacccag
     6301 gtttgcaaag ccgcaaagtg caaaagtagc aacaacaata cttttttggc tcaaaaccgg
     6361 ttttaaagca gtcaggtcaa ggtatgcaat aaactcgtta aacacaagtt ttgtgcccat
     6421 taacgcaccg acatccatag cctctttaaa aggcacgccc attgcaactg caaacagcga
     6481 gaatatacta ccaaggattt cctttaaaga caggtgtgtt aaatctatgt gtataaaaga
     6541 caaattcata tgcaaaacat ttgccataaa cagacccaaa tgaccgagca tccaatcaac
     6601 catggatatt aaagcagtaa gagcaataag cattgctatt acattaatag aaactttcat
     6661 accgtctgag gcaccgtgag ctattgaatc tataagnntt acgtgtgttt ttttaatttc
     6721 tatttttaca tcgtttttag tctgcggttc atcagtttca gggtaaacta tttttgaaat
     6781 aacaagtgcg cccggcgcag ccatgataga tgcggcaagc agatactcag caggaatacc
     6841 cattcccaca tacatagcca ttacgccgcc cgcaatacaa gccattgagc ctgtcataga
     6901 agcaagaagc tctgacattg tcattgtggc aaggtagggt ttaatcataa tttgcgcttc
     6961 tacctgtccg acaaaagcag atgctatatt agacaaagat tctgcacctg aaacattcat
     7021 caatttgtac ataactttag cacatgcttc cacaaccctt tgcataattc cgtagtaata
     7081 aagtatattt acaagaatca aaataaagat aattgtcggt atgagtttta acgcaaatat
     7141 aaaacctgct ccggcgccga acagttcttc catttttacg ggattattag ttaacacgcc
     7201 gaatacaaaa tttccgcctt cgtttgaaaa atcaagaatc ttctggataa acatcccaat
     7261 tgcgtggaac atatttttgc ccagaggcgt ttttaaaaca aacaccgcaa gcaatacctg
     7321 aaggacaaac cccggaatta ttgtttttag agaaattgcc ttcctattgt tggaaaatgc
     7381 atatgcaatc cctaaaataa gtactatacc gatgattccg acaaatctat ccataatgct
     7441 tcctttatat tctgttaaaa caattgtact taaatagctt ttaaattact aaacattttt
     7501 tatatatttt tgatatttgt aacaaagtta acaattattt caaaaatcat gcaaaaacaa
     7561 tgatgttttt gttttattag tactgtgaaa gtgtgaaggg aaaattatga ctaaccccgt
     7621 atcaatgcag ggacaacaaa attacagcta ttaccagcct ttaaaggcag gacattttgt
     7681 cgtaaacccg cctgttataa ggccacactc tttttatgac gaaataaaag tagacaaaga
     7741 attctacaac gagctcataa accccaagag caaagcattc tttcacaagc ctgttgcaat
     7801 gaaaacccaa aagcccaaaa acaggttaaa aaggctgctt acctggactg caataatagc
     7861 cggtgctatt gtatgctatg caaaaagaaa cttaataaaa acctttatta caaatactta
     7921 tgataaaata aaaaatcata taaagcgtaa ataaaatgga taccaattct aaacagaata
     7981 aatcgaataa acagaataac actgccgctc aaaacggcgc aaatcctttg gacaaaaagg
     8041 atttttttca gctgaccaaa caacagctgt ctgttaatat cgaaaaatac gaaactgttt
     8101 taaaaacgcc acctgtgacg attttcaaca caaaacaaat tgatgataaa aagctgcagg
     8161 aaagaccggt tgtttttcaa aaaaggatta attccacaga ctctgcaatg ctggaagaaa
     8221 gcgcatatat tgcactggat gatcaggaat tgaagcttga aaagcgcatt gaaagctacg
     8281 aaaactctct cagtcagata aatgaaaaaa tcgttgttgc gcaaacaata aacgacgaaa
     8341 aagctatcaa agaacttttg tcaggaaaaa aactgattga aagaaacctt gcaaacttgc
     8401 agcagcagta tcagcagcaa aactttgaaa ccggattgac cagtgctctt acaaaagcaa
     8461 tgaattttcc gcaaaagatg aaagaaaatt ttcaaaaagc atttaaatca tttttacgtc
     8521 gttcaaaatt tttaagaaaa tatacccccc tggtcaaagc aatgatggtc aaagacacgc
     8581 ttggcaagct ggacaaaata aacaaatccg tagatgagct tgtaaaaatg aaggtgccgt
     8641 ttggtgagca ggaagaaagg tatgaaactt tagttaacca tctttccaga gcaggtgcac
     8701 tgcattcaca gatattaaaa gaattaaacg gataaatttc gtaaatattc caaagaacga
     8761 ttggaaagca gctcattttt gagtttttta ttctttttaa tttttctgtc aacgtttaat
     8821 tcagcaacaa tgccccagtt agaatttatg ggctggaaat gtttttgttc acaatcgcat
     8881 atatagtgag ttaatgctcc aagcattgta atatcaggca aaacaagaag cgcttcacct
     8941 tttaaaaagc gtgccatatt tataccggca agcatgcctg tagcaataga ttctgtatag
     9001 ccttcggtgc ctgtgagctg accagcaaaa aacagatctt ttcttgttct gcattgcaaa
     9061 gaaggctcca gcaattgcgg gctgttgata aaagtatttc tatgcattac accatagcgc
     9121 aaaatattgg cattttccaa ccccggaata gcttgaagca gctccttttg gcttccccat
     9181 ttgaggtttg tctgaaaacc gacaagatta tacatagtag cactacggtt atcctgtcga
     9241 agctgaacaa ccgcataatt ttccacaccc gttcttttat ctacaagtcc aacaggcttc
     9301 atcggcccga agcgaagagt gtccacgcct ctggatgcaa gcacttctat tggaagacag
     9361 gattcaaaaa acttggcatc tttttcaaat tctttgagtt ctatttttgg tgcagttgta
     9421 agaatacgat aaaaattttc atactcttct ttattcatgg ggcagttgat ataagaagct
     9481 tctcccttat catagcggct tgcataaaaa gccttg
//
LOCUS       DABS01000140            8593 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_4573, whole genome shotgun sequence.
ACCESSION   DABS01000140 DABS01000000
VERSION     DABS01000140.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8593)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8593)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8593
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..2236
                     /gene="nifJ"
                     /locus_tag="CPT85_06075"
     CDS             <1..2236
                     /gene="nifJ"
                     /locus_tag="CPT85_06075"
                     /inference="COORDINATES: protein motif:HMM:TIGR02176"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="DAB22541.1"
                     /translation="SIKIIGQYTNKDAQAYFAYDSKKSFGVTVSHLRFGDKAIKSTYL
                     ITAPDFVSCSTHSYIGRYDLLKGIKEGGVFLLNSPWSKEEAFSHLTRDMQETIINKKI
                     KFYNIDAESLIEKQPGLRGKGANTVMMVAYFKVSGIIPFEQALEGMREMTKKTFKKKG
                     DDVVNMNLALIDAAVDACEEVIVPASLDGVCSADPVKFISDDASEFAKKIIEPSMRQK
                     GDDIPVSAMSVDGVIPTGTSCLEKRAIAPRVPHWNSEACIQCGICASACPHAAIRTKL
                     IEKENLKDAPESFNTIEAKPNANGEHFKVQVYCKDCTGCGVCVDQCPANKNPEKQALT
                     WSTIEKEEAACEVVNEKFFDELPDNVMGKNTTKTIKGAMLRKPLFEFSGACAGCGETP
                     YVKLVSQLFGENAIVANATGCSSIYSGTFPTIPYTTTKAGRGPAWANSLFEDNAEFGF
                     GMRLAVEQNRDTLRTFAQKVIENEKTPADLREALTEALTHFDNSKTEEAVAAQDKAKA
                     VLAKYADVDCADLAKVRELQDYFTDKSVWIIGGDGWANDIGYGGIDHVLAQNKNVNIL
                     VLDTEVYSNTGGQASKSTPTGAVAKFATGGKKTYKKNMGLMSMSYGYVYVASVALGAD
                     RAQTLKAFQEAEAYDGPSIIFAYAPCIAHGIDMSKTQTEQKRAVEAGYFPLYRYNPAN
                     EQPFSWDAKDPKGSYQEFIKSEGRYKQLAKTNPDAAEELYQKAEEDAAKRMAVFKAIG
                     ELIK"
     gene            complement(2316..2873)
                     /locus_tag="CPT85_06080"
     CDS             complement(2316..2873)
                     /locus_tag="CPT85_06080"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22542.1"
                     /translation="MYDKNPIKKSGERSTAILATVGAGLIAGARLLFAIADDGDGAQF
                     LGEMSEKISKKILKRNMKPGEKLTTIQKIGAPLAVIAGFVAICAVIYTLYNMPKALYA
                     ADVKTFKKGKEMDVYIKGNAVEKELYNQMNNQAKTATAREKAKLNEQYAKLKAAKNVV
                     PGFVKLKHPELAAQQKVTSSSTIVV"
     assembly_gap    2887..2888
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3002..3484)
                     /locus_tag="CPT85_06085"
     CDS             complement(3002..3484)
                     /locus_tag="CPT85_06085"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22543.1"
                     /translation="MNVARVGMLNTISRASFGQDQSQKAEQKAASGYENPISRKKEKA
                     LATLSVIGGSAVLGAVVGGLVSCLKIGTKKSALIGVGTAVVTAALALPSKLYNTAVNA
                     FAREKEMDVYSRDKELKSALTEEVHKEVLDPEVSLDKKLDDNLKLQTANRAQALLVQH
                     "
     gene            complement(3572..4885)
                     /locus_tag="CPT85_06090"
     CDS             complement(3572..4885)
                     /locus_tag="CPT85_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007780085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="DAB22544.1"
                     /translation="MRFVDLIDKKKKGHEHTNEEISFIVNSIMNATAEDYQVSAWLMA
                     VYFKGMTLDETANLTKAIIDSGETIDLSPIRNENCRHIADKHSTGGVGDKITLILIPL
                     LAACNVPIAKLSGRGLGHTGGTIDKLEAIPGFKTDLEIEELIQKVKETGLAIGSQTGR
                     LTPADGKLYALRDVTATVDAIPLIASSVVSKKIASGADYVVLDVKYGSGAFLKTPQEA
                     QELAQWMVNIAEKLGKKFHAVITSMEQPLGRAVGNAIEVIESIEFLKGNMTPDIKELT
                     YEMAALTLTQLGLANTKEEAYPKVSDAITSGRGLEYFKKLIISQSGNPDVIENYRLFP
                     QPNYAFQAKAPQDGFVWNIDAYKTAYACKILGAGREKKTDQIDYSAGIYLNKICAEPV
                     KQGEVVATLYANDADKLEAAQKHMEEAFSFSCEQRDRGSLIYKIL"
     gene            4992..8063
                     /locus_tag="CPT85_06095"
     CDS             4992..8063
                     /locus_tag="CPT85_06095"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22545.1"
                     /translation="MRLLRNMRIVIMEKFVLCSCKPARSADLCCGGGGWMPIKSILCV
                     ASLAAFLCINLPAFADITLPQDTNTDNHAYTLTKVDQQGENTITKYEWSEEQNKLVPV
                     NYRVDLKKKQYGNSNGETTLIYGWEKNPDTNFLEFKKDPTNPVDQTITYTYNKADEQQ
                     KLDNRADNSDKTITGVFVGQTGTEQGGGAIFNNYLLPILGDINADFVGNYISSSSSDA
                     DGGAIYNQGIIRNITGDFIGNYASSSSSSKLDAALGGAIYNHRIREDITKGTIGDITG
                     DFIGNYASSTITEAYGGAIYNANGAVIGNITGDFIGNYVSGSDPLALGGAIFNDCTMS
                     GYNSLIGDITGDFIGNYAKIEGELATGGAIYNGTGAVIGNITGDFIGNYVSGVSAAGG
                     AISNDGTIGKTDEDGNLIGGIYGSFINNYAKIESDSNLVLGGAVYTARDMNFIADNQT
                     NYFSGNYTEDCRGKTPNAIFVETSSPSPATQPTIKLIAQNNGQIIFNDQIDGGKPTAL
                     TTIPTTIDRTNQYNLALTGDKTGTIHLNNEVINANATSENVTLNLGKNNVFEQSNFTI
                     TSGSLGFINGIAEQQIMQSANINGNIKLAVDVDLAAEKMDTLPDNVAVSKDAQINVNH
                     LNLISDANKDITNIQFAPDAYKSQVSYTGSNPVAYSPIWKYDVDYLKETGEFLFTRGA
                     SSTGNPSDNYNPAVLAPSVASQAGAYTTQLQTFNYAFQHSDNFMNIPYLERLSIKNQN
                     KYALSPTADATDVGTFSPLLTKHYHNGFWFKPYASFENIPLKNGPKVSNINYGTLVGY
                     DTEMKTLKHGIDRVLTAYIGYNGASQRYSGVDAYQNGGLIGTTATFYKGNFFNATTLS
                     VGASAGSASNMYGSENYTMLMAGIGNKTGYNFEFLQGKAILQPSMLLSYTFVNTFDYT
                     NSAGLRIKSDPLNAIQLAPGIKLIGNTKSGWQPYASVAMVWNLLDDTKVTANDTRLPE
                     MSIKPYVQYGVGVQKCFKDDKMTAFGQAMVHNGGRNGISLTAGLRWRVGKE"
     gene            complement(8103..8579)
                     /locus_tag="CPT85_06100"
     CDS             complement(8103..8579)
                     /locus_tag="CPT85_06100"
                     /inference="COORDINATES: protein motif:HMM:PF03938.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22546.1"
                     /translation="MKKLKALLVSAAVVLGLGALSTTANAQTIGYVNYKTVESNYEYA
                     KSAYKEIDTKYLELQQYLMDKEKQYKNIDSPINKKNFEDQVQKDFKLKNDEFDKLKLK
                     RAQEVESNILQATKAVAADKKIDIVLDYRVIFTGGVDLSQDVINYLNSPRFKPAKK"
BASE COUNT         2586 a         1879 c         1641 g         2485 t
ORIGIN      
        1 ctctatcaag attatcggtc agtatacaaa caaagatgct caagcatact ttgcttatga
       61 ctctaaaaaa tcttttggtg taacagtttc tcacttgaga ttcggtgaca aggctattaa
      121 atcaacttac cttatcacag ctcctgactt tgtatcttgc tcaactcact cttatatcgg
      181 cagatatgac ttgttgaaag gtatcaaaga aggcggtgta ttccttctta acagcccttg
      241 gtctaaagaa gaagcattct ctcacttaac aagagatatg caagaaacta tcatcaataa
      301 gaaaatcaaa ttctacaaca ttgatgcaga atctcttatt gaaaaacaac cgggcttaag
      361 aggtaaaggt gctaacacag taatgatggt agcttacttc aaggtatcag gtatcattcc
      421 ttttgaacaa gctttggaag gtatgagaga aatgactaag aaaaccttta agaaaaaagg
      481 cgacgatgtt gttaacatga accttgcttt gatcgacgca gctgttgatg cttgtgaaga
      541 agttattgtt cctgcttcat tagacggtgt ttgctcagca gatcctgtga aattcatctc
      601 tgatgatgct tcagaatttg ctaaaaaaat cattgaacct tcaatgagac aaaaaggcga
      661 tgacatacca gtatcagcta tgtcagttga cggtgtaatc ccgacaggta cttcttgtct
      721 tgaaaaacgt gctattgcac cgagagttcc tcactggaat tcagaagctt gtatccaatg
      781 cggtatctgt gcttctgcat gtcctcatgc agcaatcaga actaaattga ttgaaaagga
      841 aaatcttaaa gatgctcctg aatcattcaa tacaattgaa gcaaaaccaa atgcaaatgg
      901 tgaacacttc aaagttcaag tttattgcaa agattgtaca ggctgcggtg tttgtgtgga
      961 tcaatgtcct gctaacaaaa accctgaaaa acaagctctt acttggtcaa ctattgaaaa
     1021 agaagaagca gcttgtgaag ttgttaatga aaaattcttt gacgaattac ctgataacgt
     1081 tatgggtaaa aacactacaa aaactatcaa aggcgctatg cttagaaaac cgttattcga
     1141 attctccggc gcttgtgctg gttgtggtga aactccttac gttaaactgg tttctcaatt
     1201 gttcggtgaa aatgctatcg ttgctaacgc aacaggttgt tcttcaatct actcaggtac
     1261 attcccgaca attccttaca caactacaaa agcaggcaga ggtccggctt gggcaaactc
     1321 attgttcgaa gacaacgctg agttcggctt tggtatgaga cttgctgttg agcaaaacag
     1381 agacactttg agaacatttg ctcaaaaagt tatcgaaaat gaaaaaactc ctgctgacct
     1441 tagagaagca ttgacagaag ctttgactca ctttgataac tcaaagacag aagaagctgt
     1501 tgctgctcaa gataaagcta aagctgttct tgctaagtat gcagatgttg attgtgctga
     1561 tcttgctaaa gtaagagagc tccaggacta cttcactgac aaatctgtat ggattattgg
     1621 tggtgacgga tgggctaacg atatcggata cggcggtatt gaccacgttc ttgcacaaaa
     1681 caaaaacgta aatatccttg tactcgatac agaagtttac tctaacacag gcggtcaggc
     1741 ttctaaatct acacctacag gtgcagtagc taaatttgct acaggcggta agaaaactta
     1801 caagaaaaat atgggcttga tgagtatgtc ttacggctat gtatatgtag catcagttgc
     1861 tttaggtgct gacagagctc aaactcttaa agcattccag gaagctgaag catatgatgg
     1921 accttctatc atctttgctt atgctccttg tatcgcacac ggtatcgaca tgagtaaaac
     1981 tcagacagaa caaaaacgtg ctgttgaagc aggatacttc ccgctttaca gatacaaccc
     2041 tgctaacgaa caaccgttca gctgggatgc taaagatcct aaaggcagct atcaagaatt
     2101 cattaagagc gaaggacgtt ataaacaatt ggcaaaaact aaccctgacg ctgctgaaga
     2161 actctatcaa aaagctgaag aagatgcagc taagagaatg gctgtgttca aagctatcgg
     2221 tgaacttatt aaataagttt gtcaggcaaa taaaaagagg tatcggaaac ggtacctctt
     2281 tttttatgtt cttgtgtttt taattagagc aattgttaaa caactattgt tgaagaggac
     2341 gttacttttt gttgcgctgc tagctccgga tgtttgagtt ttacaaagcc gggaacaacg
     2401 tttttggctg ctttaagttt ggcgtattgc tcgtttagct ttgctttttc tctggcggtt
     2461 gcagtttttg cttgattgtt catctggtta taaagctctt tttcaacggc attgcctttg
     2521 atgtaaacgt ccatttcttt tccctttttg aaggttttta catcggctgc gtataaggct
     2581 tttggcatgt tgtacagtgt ataaattact gcgcagattg caacaaagcc ggcaataaca
     2641 gcaagaggtg ctccgatttt ttggattgtg gtgagttttt cacccggttt catattacgt
     2701 ttaaggattt tcttcgagat tttttctgac atctctccaa ggaactgcgc tccgtctccg
     2761 tcgtctgcga ttgcaaatag cagccttgca cctgctatga gacctgcacc tactgttgca
     2821 agtattgcag ttgaacgctc tccgcttttt tttatcggat ttttatcata cacgggcttt
     2881 atatcanngc gcgaggctcc gtttttgaag ccgtgtctgt gttttttgct gatgccgtga
     2941 atgccatact gtggttattt tttacggctg aaattatcat atcttttttg tctctcgatg
     3001 attagtgttg aactaataat gcttgtgctc tgttagctgt ttggagcttg agattgtcat
     3061 cgagcttttt gtctaacgat acttcaggat ctaaaacttc tttgtgaact tcttctgtca
     3121 aagctgattt gagctctttg tctcttgagt aaacgtccat ttctttttct cttgcaaaag
     3181 cgtttactgc tgtattatat aattttgaag gaagtgccaa cgctgctgtt acaactgctg
     3241 taccaacacc gattaatgct gattttttag taccgatttt aagacagctg acaaggccgc
     3301 caactacagc accaagaaca gcagaaccac caattactga taaagtagca agtgcttttt
     3361 cttttttgcg agaaatagga ttttcataac cagaagctgc cttttgttca gctttctggc
     3421 tttggtcttg gccaaagctt gctcttgata tagtgttcaa catacctaca cgtgctacat
     3481 tcatctttgt tctccttaaa taattaataa cctcttgtga ccgttttaac attcgtaaat
     3541 gatttttttt gccagttttt aatgtaaaga tttacaatat tttataaatc aacgagcctc
     3601 tgtctctttg ttcgcaagag aaagaaaatg cctcttccat atgtttttgc gcagcttcaa
     3661 gcttgtctgc atcatttgca tagagcgttg caacgacttc accctgtttg acaggctcag
     3721 cacaaatttt gttaagataa atcccggctg agtaatcaat ctggtcggtt ttcttttctc
     3781 tgcctgcacc taatatttta caggcataag ctgtcttgta cgcatcaatg ttccaaacaa
     3841 atccgtcttg cggtgctttt gcctgaaaag cataatttgg ctgcgggaaa agcctgtaat
     3901 tttctattac atcaggattt ccgctttgag agattattag ctttttgaaa tattccaggc
     3961 ctctgcctga tgttattgca tcagacactt ttggatatgc ctcttctttt gtatttgcca
     4021 accccagctg tgttagagtg agagctgcca tttcataagt gagttctttt atatccggtg
     4081 tcatattacc ttttaaaaac tctatagact ctattacctc aattgcattg ccaacagctc
     4141 tgcccagagg ctgctccatt gatgtaatta ccgcatggaa tttcttacca agtttttctg
     4201 caatatttac catccactgt gcaagctctt gcgcttcttg cggagttttc agaaatgcac
     4261 cggagccgta tttcacatcc agcacaacat aatccgcacc ggatgctatt tttttagata
     4321 caacagatga cgcaatcaat ggtattgcat ccactgttgc agttacatct cttaaggcat
     4381 agagctttcc gtcagcaggc gtaaggcgtc ctgtttgaga acctattgca agacctgttt
     4441 ctttaacttt ttgaatcaat tcttctatct caaggtctgt tttaaaaccc ggtatagcct
     4501 cgagtttatc aattgtgcct cctgtatgtc cgagacctct tcctgaaagc tttgcaattg
     4561 gcacattgca tgctgcaagc aacgggataa ggatgagtgt gattttgtcg cctactccgc
     4621 ctgttgagtg tttatccgca atatgtctgc agttttcatt tcttatagga gataaatcaa
     4681 ttgtctcgcc cgaatcaatt attgcttttg tcagatttgc tgtctcatca agagtcatac
     4741 ctttaaaata cacggccata agccaggctg aaacctgata atcttcagcc gtagcgttca
     4801 ttattgaatt aacaataaag ctgatttctt cgtttgtgtg ttcatgccct tttttctttt
     4861 tatcaattaa atcaacaaat ctcacaaaat acctcagttc ttttatttaa ggataacata
     4921 aattatatca tatgtttctt ttgtaaaatt taactatgtt aaaaaaaaca atcttcgtgg
     4981 aatagtaaca catgaggtta cttcgaaaca tgaggatagt aattatggaa aagtttgttt
     5041 tgtgttcctg caaacccgct cgtagtgctg atttatgttg cggggggggg ggctggatgc
     5101 caataaaatc aatattgtgt gtggcatcgc ttgcggcatt tttgtgcatt aatctccccg
     5161 catttgccga tatcaccctg ccgcaagata caaacacaga caaccatgcc tataccttga
     5221 caaaagttga ccaacagggc gaaaacacca taacaaaata cgaatggagc gaagaacaaa
     5281 acaaactcgt ccccgtgaat tatcgtgttg acctgaaaaa aaaacaatac ggcaactcaa
     5341 atggagaaac aactcttatt tacggctggg aaaagaatcc tgatacaaac ttccttgaat
     5401 tcaaaaaaga cccaacaaat cctgtagacc agacaataac atacacttac aataaagctg
     5461 atgagcaaca gaaattagat aatagagctg acaattccga caagacaata acaggtgtgt
     5521 ttgttggaca aactggtact gaacagggcg gaggtgcgat atttaataat tatttactcc
     5581 caatacttgg tgatatcaat gctgattttg ttggcaacta catatcctcc tcttccagtg
     5641 atgctgatgg cggagcaatt tataatcaag gaataatcag aaacataacc ggcgatttca
     5701 ttggtaacta tgcatcttca tctagctctt ccaaacttga cgctgcttta ggtggagcaa
     5761 tttataatca cagaataaga gaagatataa ctaaaggaac aatcggagat ataaccggcg
     5821 acttcatagg caattacgca tcttccacaa ttaccgaagc ttatggcgga gcaatttata
     5881 acgctaatgg agcagtaatc ggaaacataa ccggtgattt cataggcaac tatgtttctg
     5941 gttctgatcc tttggcccta ggcggtgcaa tttttaatga ttgcactatg agtggttata
     6001 atagcttaat aggcgatata acaggcgatt tcatcggtaa ctatgcaaaa atagaagggg
     6061 agcttgccac aggcggagca atttataacg gtactggagc agtaatcgga aatataacag
     6121 gggatttcat aggcaactat gtttctggtg ttagtgccgc aggcggtgca ataagtaatg
     6181 atggaacaat cggaaaaaca gacgaagatg gcaatcttat cggaggaatc tacggctcct
     6241 tcattaacaa ttacgccaaa atagaatcag attctaactt ggtcctgggc ggagccgtgt
     6301 atacagccag agacatgaac ttcatagccg acaatcaaac aaactatttc tccggcaact
     6361 acacggaaga ctgcaggggt aagacaccca acgcaatctt cgtagaaacc tcttcaccat
     6421 ctccggcaac ccaaccaaca atcaaactaa tagcccaaaa caacggccaa ataatcttca
     6481 atgaccaaat agacggaggc aagcccacag ccctaacaac tatcccaaca actatcgacc
     6541 gcacaaacca atacaacctg gcactaaccg gcgataaaac cggcacaatc cacctgaata
     6601 acgaagtaat aaacgccaac gcaacaagcg aaaatgtaac cctgaacctt ggcaagaata
     6661 acgtgttcga acaatcaaac tttacaataa cctcaggttc cttaggcttt ataaacggaa
     6721 ttgccgaaca acaaatcatg caatccgcca acatcaacgg aaacataaag cttgccgtag
     6781 acgtcgacct cgccgctgaa aaaatggaca ccctcccgga taatgtagca gtctctaaag
     6841 acgcccaaat caacgtaaac cacctgaacc taatatcaga cgcaaataaa gatatcacaa
     6901 atatccaatt cgccccggat gcctataaat cacaagtatc ctacacaggc tcaaatcccg
     6961 tagcctactc ccccatctgg aaatacgacg tggactacct aaaagaaaca ggcgaattcc
     7021 tcttcacccg cggagcctcc tccacaggca acccatcaga caactacaac cccgcagtcc
     7081 tcgccccatc cgtcgcaagc caagccggag cctacacaac ccagcttcaa accttcaact
     7141 acgccttcca acactcggat aacttcatga atatccccta cctcgaaaga ttatcaatca
     7201 aaaatcaaaa taaatacgct ttatccccca cagctgatgc aacagacgta ggcaccttct
     7261 cccctcttct caccaaacac taccacaacg gcttctggtt taaaccctac gcaagcttcg
     7321 aaaatattcc gctcaaaaac ggccccaaag tctcaaacat caactacggc accctggtag
     7381 gctatgacac tgaaatgaaa accttaaaac acggcataga tagagtcctc acagcctaca
     7441 taggctacaa cggcgccagc caacgctact caggcgtaga cgcctaccaa aacggcggcc
     7501 tgataggtac aacggcaacc ttctataaag gcaacttctt caacgccaca accctttccg
     7561 taggggcctc agccggctcc gcctcaaaca tgtatggctc agaaaactac acaatgctca
     7621 tggccggcat aggcaacaaa accggctaca acttcgaatt cctccaaggc aaagccatac
     7681 tccaaccaag tatgctatta agctatacat tcgtaaatac cttcgactac acaaactccg
     7741 ccggtcttag aataaaaagt gacccgctaa acgccatcca acttgccccc ggcataaaac
     7801 tcataggcaa cacaaaatca ggctggcaac catacgcaag cgtagcaatg gtgtggaacc
     7861 tgctggatga cacaaaagtg acagccaacg acacaagact gcccgaaatg agcataaaac
     7921 catacgtgca atacggtgta ggggtccaaa aatgcttcaa agacgataaa atgacagcgt
     7981 ttggccaagc catggtgcac aacggagggc gcaacggaat atctctgact gcaggccttc
     8041 gctggagggt ggggaaggag tagtagataa aaaaaatggg acctttttgg ccccattttt
     8101 tattattttt tcgcaggttt aaatcttggt gaatttaaat aatttataac atcttgtgac
     8161 aaatcaacac cacctgtaaa tattactctg taatcaagca ctatatcaat ttttttatcg
     8221 gctgcaactg cttttgttgc ttgcaggata ttgctttcta cttcttgtgc tctttttagt
     8281 ttgagtttat caaattcatc atttttaagt ttaaaatcct tttgaacctg atcctcaaag
     8341 ttctttttgt taataggaga atcgatattt ttgtattgtt tctctttatc cattaagtat
     8401 tgttgcagct caagatattt tgtatcaatt tctttataag ctgattttgc gtattcatag
     8461 tttgattcaa cagttttgta gttaacataa cctatggttt gtgcgttagc tgttgtgctc
     8521 aatgccccca aacccagcac tactgctgct gaaactaaca gggcttttaa ttttttcatg
     8581 atatattact cct
//
LOCUS       DABS01000141           12217 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12940, whole genome shotgun sequence.
ACCESSION   DABS01000141 DABS01000000
VERSION     DABS01000141.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 12217)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 12217)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12217
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..908)
                     /gene="lpxB"
                     /locus_tag="CPT85_06105"
     CDS             complement(<1..908)
                     /gene="lpxB"
                     /locus_tag="CPT85_06105"
                     /inference="COORDINATES: protein motif:HMM:PF02684.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="DAB22487.1"
                     /translation="MTKKLFIITGELSGDKHASLVVKNLLENRNDIEIEAIGGENLKK
                     LGVKLFVDHSKAHMSAMGLTPKILFDHITLGKRVVDYLKNEYNPDLVLLIDYGGFNLN
                     ISKFLKKAGIKVFYYIPPQIWASRKWRIKTVKKNISKVMTIFPFEKEMYEKEGIDAQF
                     VGHPLITQMPPCVNRDEVFEKYGLDXKNKKLISIFPGSRTFELHNLMKTFLKSAALIA
                     QKRDDVQFVIAQADSLKDDVFKKYLGKTNIKVIKNDNYSLLSVSDALMLASGTVALEA
                     ALYTTPMIISYKGPWIAYLVYRLVRC"
     assembly_gap    352..353
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(920..1672)
                     /locus_tag="CPT85_06110"
     CDS             complement(920..1672)
                     /locus_tag="CPT85_06110"
                     /inference="COORDINATES: protein motif:HMM:PF06230.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22488.1"
                     /translation="MAESAQKNGFDVVAISLSSDNRNRLKKYCSKVYNFGPGEVMKIK
                     QTLIDEKITQVTFIGKVHKGLLLRRPKLDMEAIRLMKEAQRLNDDAVMLIIVDQLEQM
                     GICVLDQTIFIKNLMAPPGVLGVHEPDEDQALDVEYGYWLAKEMGKLDVGQSVVIKNK
                     MIMAVEAIEGTDKCIERGCKLGGKGITVVKVSKPTQDKRFDIPAIGLNTLKTMDRYGA
                     KILAIEANETIIVDQKKVIDFANKKGIIVMAI"
     gene            1821..2759
                     /locus_tag="CPT85_06115"
     CDS             1821..2759
                     /locus_tag="CPT85_06115"
                     /inference="COORDINATES: protein motif:HMM:PRK00283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase"
                     /protein_id="DAB22489.1"
                     /translation="MKYYIIINMGLSETTKTYLKHFLIYLEVEKNFSKHTIRAYNSDI
                     LSFLLWLDNTPIEQTNHTKLKDYLIFIQRFNYSKTTLSRKIASIRTFYRFLYRERIIE
                     TNPANSVHAPKRNKSLPKFLTTKEIEQILNNIKIDTPAGYRNRVILELLYATGMRISE
                     LSNLNFSNLNLAENEITVMGKGAKERIVLISSRAKDFLQKYIDNVRFMVVEGGTPPQQ
                     NEDSPVFINKTGYRLQTQSVRTAINDIVKKIQLPKKVTPHVFRHSFATMLLENGADLR
                     VVQELLGHASISNTQIYTHISTERLKEVYDKSHPRA"
     assembly_gap    2880..2881
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2903..3841
                     /locus_tag="CPT85_06120"
     CDS             2903..3841
                     /locus_tag="CPT85_06120"
                     /inference="COORDINATES: protein motif:HMM:PF00294.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22490.1"
                     /translation="MAFPYGAKVEIDSFRTAVGGGGLNAAANLANLGFNTSAIFKIGE
                     DFQGKTIKHKVKLAHVDTSNIIESKTETSGFSIILLSFEGNRTVLAHRGTNGTIKENE
                     INYEAIKNSKWLYIAPLNGNSGAVLDKIAHFAEENNTNVIINPGSSSLKEGLKYFEKI
                     LATAEVVVMNKEEASLVTKIDVRPDTKTECYSAEVIHPDIKAMLDKLKSTDAKVVIIT
                     DGKNGVYAYDGKKYYRCPEFPAKVVSTLGAGDALSSTFAAALEHTNWNIEKSLMMASV
                     NAASVVSNFGAQEGFLTFEQIEEQLKHAPTFRVEVV"
     gene            3945..4490
                     /locus_tag="CPT85_06125"
     CDS             3945..4490
                     /locus_tag="CPT85_06125"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22491.1"
                     /translation="MTLNGITPSFGKTHINSSKMNATQKELSENIIEQTKNTDEFKKA
                     DKNNVDLYFLPKGKKSVNVVCVDNDSQQVFKKDRNKRIIHSFSTESFAPEFNVGIKKL
                     LKTLKDINNSEIDKPHIWDHLIGTAKTDVAKMRPEIYKGVKDDVKTYVDKFGYEKDEA
                     LETVSTQFIELFEKTNKNDEF"
     gene            complement(4509..5483)
                     /locus_tag="CPT85_06130"
     CDS             complement(4509..5483)
                     /locus_tag="CPT85_06130"
                     /inference="COORDINATES: protein motif:HMM:PF03968.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22492.1"
                     /translation="MKNFKILILISAIMLTIAGIAIASDLSIESDKQSFKMEENKAKF
                     EGNVRVKMDDISATSAKAEVFIDPKTKQLSDAVMYDQPYVVQVKQDKSNEIKSNILKM
                     SLLNKKLRAEGNTQTTVTEKGSMKPTVIITADTQEYDTKTKTLTAQGSEIIYYKDVET
                     FSNSAVANLNQNGDLQKLTLTGNGRIKQKDSVITANKFIYDAVKEIAYGLGSAHSDVD
                     MDGTRINVWSDRQEYYKASNILQASGKVHVTYKDYDAKGPKATVYPDKITNKPNEIVF
                     IGRSTIVEQMRSIEADRIKMYINPKNFFAEGNVKTVIRNVQDNKKNNF"
     gene            complement(5470..6051)
                     /gene="lptC"
                     /locus_tag="CPT85_06135"
     CDS             complement(5470..6051)
                     /gene="lptC"
                     /locus_tag="CPT85_06135"
                     /inference="COORDINATES: protein motif:HMM:TIGR04409"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="DAB22493.1"
                     /translation="MSKRKITYIVILSLVVLGCAWAFISAGVITKNFKKEAINNAGEK
                     QKLNIENLIITETKEDKKYWELYAESGYYDSQNKVAILYNVIGNFYDDDKVVLSMESS
                     KGTFSEETKKVVLYENSYFIYKDGTDVRADRFVWQGNDKDIVAQGNVIIRRNGELRTF
                     SNEAVLTNQMTSVRIKGRSKTELYSKGNFDEKF"
     gene            6207..7802
                     /locus_tag="CPT85_06140"
     CDS             6207..7802
                     /locus_tag="CPT85_06140"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22494.1"
                     /translation="MITLNSSLFSLTGISKTHALPFKQAKHVNSASVNMLQKDTFEKT
                     QNSKNVSSPISMGKTQPVKNQEFLQTYETVKELKKEKVIPEELFAFVEPVVNDAGEKE
                     FTALQTKFIDSAQKRMNFYKDISQELEKAGADAKEEVLDQVKEIFGGEEGLGRYVVAR
                     SKSQKSIFNKLVKEFKDESFYPHMMDRLSTEAYKKPYSLLNIEEYKDIADKHFKGKTF
                     NEEQYNQLIKPYSSLNKNDKKLLLMALNDKQIEFNQKEIEDCIKIFKPTSKDHDKAVN
                     YVKDLVGTRLILPNGSLVELEQVEKYISKAIRYGKIKITRMSNYHDNYILPYINYETA
                     KKWKETMPGMVLVENKKVRKRNGYTTTQFNIVHPLKNKTTHKSKDSAKSKVSKKAQHI
                     EENKLKQKYVFGELQIRTKKLNDIGQIEHLIYDILEGKDISQGIPELRKYYDSTGIEK
                     AVNEVFNDDVKEENYIKYENSMYYFIRHNETRKKNGPKYLKPILSMYELKGYEILGFD
                     SLARIDKEAEKIKEKFRKSQEKE"
     gene            7808..8224
                     /locus_tag="CPT85_06145"
     CDS             7808..8224
                     /locus_tag="CPT85_06145"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22495.1"
                     /translation="MKVALFTNPYLSSNYKYQTNKQAQPSFQGMTNKVPKEINDAFSI
                     LRKKVATLPERGSNDVLTVKLIDRADEAACVTVERKRKNWLLSFIFDNTKEATKAEVT
                     HSKGDKKAIQALLKDQETKKELNNFLTENGVNFNTF"
     gene            complement(8241..9311)
                     /locus_tag="CPT85_06150"
     CDS             complement(8241..9311)
                     /locus_tag="CPT85_06150"
                     /inference="COORDINATES: protein motif:HMM:PRK00143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="DAB22496.1"
                     /translation="MKVRDILSNKGKVAVALSGGLDSSVTCFLLKNQGYDVCAITVKM
                     VDDAKFEQIANNAKKVADKIGIPHYVMDLSKEFKKDVIDYFEESYKKGQTPNPCILCN
                     RTIKWGRLFDFAVDELGCDFVSSGHYARIVDDNGIKKMYPAKDLKKDQQYYLFELDQR
                     HLSRILFPLCDYVKDDIRQIAAQNDLPSKSSKESQDICFITKPMTTKKYITDKFGVKK
                     GDFIFIKTGQKVGSHEGFYQYTIGQRKGIGIAWAEPLYVVKLDAQNNVVYVGTQDDLM
                     QKSLTIHDIKMQYPNDRTEFEALVKIRYNMEAKSAVVKLDYENNTGVITFDEPVASIT
                     SGQAAVFYDKQDRHLIGGGWID"
     gene            complement(9283..9930)
                     /locus_tag="CPT85_06155"
     CDS             complement(9283..9930)
                     /locus_tag="CPT85_06155"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22497.1"
                     /translation="MHEYYFKIKKGDLEFEFSTTDKFTFEEKLSDWINGIVHGAYIEP
                     PHQPTAQTQEQQHDNVQEPVQRSGFIDVKNLSSINDLTTPVFDSAQKANIVEEVNFER
                     ALEESMQNPKTEVVEKVDMISDFEGYLHSYNPQNSIDNLVVTALYILNIENKERFTIK
                     QLNAKLVPLTGKPVDHSVIEDAMNQNLIRIVPDLTGTSEYTEYTLTDEGEGYFVQ"
     gene            complement(9933..11370)
                     /locus_tag="CPT85_06160"
                     /pseudo
     CDS             complement(9933..11370)
                     /locus_tag="CPT85_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009708301.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     forms a heterodimer with subunit 1 to form the P protein;
                     frameshifted; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycine dehydrogenase
                     (aminomethyl-transferring)"
     assembly_gap    10482..10483
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            11464..>12217
                     /locus_tag="CPT85_06165"
     CDS             11464..>12217
                     /locus_tag="CPT85_06165"
                     /inference="COORDINATES: protein motif:HMM:PF13416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22498.1"
                     /translation="MKNLKIIIAILCVCLICIDAVYLLTKPQKTEQKTPAQTTKEVVF
                     WSLQMGTFNNYMNPLIEQFEKENPDIKIKWIDVPYSEGEKRTLASILSTTPPDLVNLT
                     PDFSSVLAQKQALHYIDCNKLNAYNPLIIDMLKQDGKCYAIPFYATSSLTFYNKKILD
                     DSAITSIPKTYDEMNALAPRIKEKTGKFVTMPTLTENDTLLKILNKYNINTPESLVSN
                     KSVKIFNDYKYLYNSDLIPKESITQNHQEALEK"
BASE COUNT         4105 a         2289 c         2001 g         3816 t
ORIGIN      
        1 atacacctta caagtctgta taccaaatat gctatccatg gccctttgta gctgattatc
       61 ataggagttg tgtacaatgc agcctcaagc gcgactgtac cggaagcaag catcaaagcg
      121 tcagacacac tcaatagtga atagttatca ttttttataa cttttatgtt tgtttttccg
      181 agatattttt tgaaaacatc gtcttttaag ctgtcagcct gtgcaattac aaactgaaca
      241 tcatcgcgtt tttgagcaat aagtgcagcg gacttaagaa aagttttcat aagattgtgc
      301 agctcaaatg tacggctccc cggaaaaata gagataagtt tcttattttt annatcaagt
      361 ccgtactttt caaacacctc atcacggttt acacaaggcg gcatttgcgt aatgagcgga
      421 tgtccgacaa actgtgcgtc tatgccttct ttttcataca tttctttttc aaacggaaaa
      481 atagtcataa cctttgagat atttttcttt actgttttaa ttcgccattt acgtgatgcc
      541 cagatttgag gcggaatata ataaaaaact tttatgccgg ctttttttag aaattttgaa
      601 atattaagat tgaacccgcc ataatcaata agcaggacaa gatccggatt atattcattt
      661 tttaaataat caacaactct tttgccgagt gttatgtgat caaaaagaat tttaggcgta
      721 agccccattg cagacatatg agcctttgag tggtcaacaa aaagcttaac tcctagtttt
      781 ttaaggtttt caccgccaat tgcttctatt tcaatatcgt ttctgttttc aagtaaattt
      841 ttcacaacaa gagaggcatg tttatcgccc gataattcgc ctgtgataat aaataatttt
      901 tttgtcataa gccaatcgcc taaattgcca ttacaataat gcctttttta ttggcaaaat
      961 caataacctt tttctggtcc acaataattg tttcattagc ttcgatagcc agaatttttg
     1021 cgccgtatct atccattgtt tttaaagtat taagacctat tgcaggaata tcaaaacgtt
     1081 tgtcctgagt aggtttgctc actttaacaa cagtaattcc cttgccgcca agcttacagc
     1141 cgcgctcaat acatttatct gtgccttcaa tagcttctac tgccataatc attttatttt
     1201 taattacaac agactggcca acatcaagct tgcccatttc ttttgcaagc caatagccgt
     1261 attcaacatc cagagcctgg tcttcatcag gttcatgcac accgagcact ccgggaggag
     1321 ccatcaaatt tttgatgaaa attgtctggt caagaacaca tatgcccatt tgttctagct
     1381 ggtctacaat aatgagcata actgcatcat cattaagtct ttgtgcttct ttcataaggc
     1441 ggatagcttc catatcgagc tttggtcgtc tcaaaagcag gcctttgtgt acttttccta
     1501 taaaggttac ctgtgtaatt ttttcgtcga ttaaagtttg ttttattttc ataacttcgc
     1561 ctgggccaaa gttataaact tttgaacagt attttttcaa tctgtttctg ttatctgaag
     1621 ataaggaaat agctacaaca tcaaaaccgt ttttctgtgc agattctgcc attgcaacgg
     1681 gaagctatcc gtcgcccgca atcaaacact gttttttatc caatactata gacaatttcc
     1741 tctccttttt attgccttaa aatccttgtt gtaagtttat aatacaataa caagtttttt
     1801 tttcaaactg ttaataaaat ttgaaatatt atataataat taatatggga ttgagtgaaa
     1861 caacaaaaac ttatttgaag cattttttga tttatcttga ggtggaaaaa aacttttcta
     1921 agcacaccat acgtgcatac aactcggata ttttgagctt tcttctgtgg ctggacaaca
     1981 cgccaattga acaaacaaac cacacaaaac taaaagacta tcttattttt attcaaagat
     2041 tcaattattc caagaccaca ttgtcacgta aaatagcttc aattcgtact ttttacagat
     2101 ttttgtacag agaacgaatt attgaaacaa atcctgcaaa cagtgtccat gcgccaaaga
     2161 gaaacaaaag cctgccaaaa tttttgacaa caaaagaaat agaacaaatt ttaaataaca
     2221 taaaaattga tacccctgcc ggttatagaa accgtgtaat acttgagctt ttatatgcaa
     2281 cgggtatgcg tatttcagag cttagcaacc tgaactttag caacctcaac cttgcggaaa
     2341 atgagataac agtaatgggc aaaggtgcga aagaaagaat agttttgatt tcttccagag
     2401 caaaagattt tttacaaaaa tatattgata atgtgcgttt tatggttgtt gaaggaggaa
     2461 cacctccaca gcaaaatgag gacagcccgg tctttattaa caaaacaggc tacagactgc
     2521 aaacacaatc tgtaagaaca gcaataaatg atattgtaaa aaaaatacag ctgcccaaaa
     2581 aagtaacacc tcacgttttt cgtcacagtt ttgcaacaat gctccttgaa aacggagctg
     2641 atttaagggt tgtgcaagag cttttaggtc acgcatctat ttctaacaca caaatttata
     2701 cccacatctc gacagaacga ctcaaagagg tgtatgataa aagtcacccg agagcctgat
     2761 agaataaggc aaaatatttt tagcagagga gaaaatttaa gatgttcgat tttataacca
     2821 taggcagtgc aacaatagac gcttttgtgg aaagtgaagc cgcagatata gtttctgtan
     2881 naaaaagaca agtacagagt ttatggcatt tccatacgga gccaaagtgg aaatcgacag
     2941 tttcagaaca gcagtaggag gcggcgggct aaatgcggca gcaaaccttg caaatctcgg
     3001 atttaacaca agtgcaattt ttaaaatagg agaagatttt cagggcaaaa caattaagca
     3061 taaagtaaaa ctagcccatg ttgatacatc gaacattatt gagagcaaga ctgaaacatc
     3121 aggtttttcc attatccttt tgagttttga aggcaacaga acagtgcttg ctcaccgtgg
     3181 aacaaacggt actattaaag aaaatgaaat aaattatgaa gcaatcaaaa attcaaaatg
     3241 gctctatatt gctccgttaa acggtaattc cggtgctgtg cttgacaaaa tagctcactt
     3301 tgcagaagaa aataacacaa atgtgataat aaaccccggt agttcgagtt taaaagaagg
     3361 tttaaaatat tttgaaaaaa tccttgcaac agcagaagtt gttgtaatga acaaagagga
     3421 agcctctctt gtaaccaaaa tagatgtaag acctgataca aaaaccgaat gctactcggc
     3481 agaagttatt caccctgata tcaaggcaat gcttgataaa cttaaatcaa ctgacgcaaa
     3541 agttgttatt attactgacg gcaaaaacgg tgtttatgct tatgacggta aaaaatatta
     3601 ccgctgtccg gaattcccag caaaagtagt cagcacactg ggcgcaggag atgcattatc
     3661 ttctacattt gcagctgcgc ttgaacacac aaactggaat attgaaaaat cacttatgat
     3721 ggcatctgtt aatgcagcat ctgttgtttc aaattttggt gcacaagaag gattcttaac
     3781 ctttgaacaa atagaagaac agctaaaaca cgcgccgaca ttcagagttg aggttgtata
     3841 atccttgatg taaacattta ttaatcattc ttgtttttat agcaaatttt tttaattatg
     3901 atatttacct caatatcagt ctatacaaat aaggaaatta acacatgaca ttaaacggta
     3961 ttactccttc ttttgggaaa acacatatca actcttcaaa aatgaatgca acccagaaag
     4021 agctttccga aaacattatt gaacaaacta aaaatactga cgaattcaaa aaagcagata
     4081 aaaataatgt tgatttatac tttcttccaa aaggcaaaaa atctgtaaac gttgtatgcg
     4141 ttgataatga cagccagcaa gtatttaaaa aagacagaaa taaaagaata atccattctt
     4201 tcagcacaga gtcttttgct ccggaattta atgtcggaat aaaaaaactt ttaaaaacat
     4261 tgaaagacat caacaacagt gaaattgaca aacctcatat ctgggatcac ttaataggca
     4321 cagccaaaac agatgttgca aaaatgagac ccgaaattta caaaggcgta aaagatgatg
     4381 ttaaaactta tgttgacaaa ttcggatacg aaaaagatga ggctttagaa accgtttcaa
     4441 cacaattcat tgaacttttt gaaaaaacaa acaaaaatga tgagttttaa taactcatca
     4501 tttttttatt aaaaattatt tttcttgtta tcttgtacat tcctgataac tgtcttcaca
     4561 ttaccttctg caaagaagtt tttagggttt atgtacattt tgattctatc cgcttcaatt
     4621 gagcgcattt gttcaactat tgtagaacgt ccgataaata caatttcatt aggtttgttt
     4681 gtaatcttgt ccggatatac cgtagcttta gggcctttgg catcataatc tttgtaagta
     4741 acatgcacct tgcctgatgc ctgtaatata ttggaagctt tgtaatattc ctgacggtca
     4801 gaccacacgt ttatgcgtgt tccgtccata tccacgtcgc tgtgagcaga gcccagaccg
     4861 tatgctattt ctttaactgc gtcatatata aacttgtttg cagtaataac actgtctttt
     4921 tgtttgattc ttccgtttcc tgttaaagta agcttttgca aatcaccgtt ttgattcagg
     4981 tttgcaacag cagagtttga gaatgtttca acatctttgt aataaataat ttcactaccc
     5041 tgagctgtta aagtttttgt ttttgtatcg tactcttgtg tatctgctgt aataataaca
     5101 gtcggcttca tagaaccttt ttcagtaact gttgtttgag tattgccttc tgctcttaat
     5161 tttttattga gcaaagacat ttttaatata ttagatttaa tttcgttaga tttatcctgt
     5221 tttacctgca caacataggg ctggtcatac ataaccgcat ctgaaagctg ttttgtttta
     5281 gggtcaataa aaacttcggc ttttgcggat gtggcgctaa tatcatccat ttttactctt
     5341 acattgccct caaacttggc tttattttct tccattttaa agctctgttt gtcagattcg
     5401 atagacaaat ccgaagcaat ggcaatacct gcaattgtaa gcatgattgc tgatatcaat
     5461 attaaaatct taaaattttt catcaaaatt ccccttactg tacagctctg tttttgagcg
     5521 gcctttgatt cttacacttg tcatctgatt tgtaagcacc gcttcattgc tgaaagttct
     5581 taattcaccg tttcttctga ttataacatt cccctgtgca acaatgtctt tgtcattgcc
     5641 ctgccaaaca aatctgtcgg cacgcacatc ggttccgtct ttataaataa aatacgaatt
     5701 ttcgtacaga actacttttt ttgtctcttc actaaaagta ccttttgaag actccatact
     5761 caaaacaact ttgtcatcat cataaaaatt gccaatgaca ttatacaaaa tggcaacctt
     5821 gttctgactg tcataataac cggattcggc ataaagctcc cagtattttt tgtcctcttt
     5881 tgtctctgta ataataaggt tttctatgtt gagcttttgt ttttcgccgg cattattgat
     5941 tgcttctttt ttaaaattct ttgtaatcac accggcactg ataaatgccc aggcacagcc
     6001 cagaactacc agcgaaagta ttacgatata ggttattttt cgttttgaca taagacaata
     6061 ttagcataaa tgttattatt ggcgttgaat aattaaatac tcatgttaca aattatttca
     6121 tttaaaaaat tttattacaa tccggtgaca aaattttttg tttatggctt tattaataaa
     6181 cacacacact atgacggaat aaaaaagtga taacattaaa cagctcttta ttttctttaa
     6241 caggaatatc aaaaacacat gcgctgcctt ttaaacaggc aaagcatgtt aacagtgcgt
     6301 ctgttaacat gcttcaaaag gatacttttg aaaagacaca aaattctaaa aatgtatcct
     6361 cacctatttc tatgggcaaa actcaacctg taaaaaatca ggaattttta cagacatatg
     6421 aaacagttaa agaactaaaa aaggaaaaag ttatacctga agagctgttt gcatttgttg
     6481 agcctgttgt aaatgatgca ggagaaaaag aattcacagc attgcaaaca aaatttattg
     6541 attctgcaca aaagagaatg aatttttaca aagatatttc tcaagagctt gaaaaagcag
     6601 gtgcagatgc aaaagaagaa gtacttgatc aggtcaaaga aatctttggc ggagaagaag
     6661 gtctcggccg ttatgtcgtg gcaagaagta aatcccaaaa gtctatattc aacaaactcg
     6721 tcaaagagtt taaagacgaa agcttttatc ctcacatgat ggacaggctt tctacagaag
     6781 catataaaaa gccttattct ttgttaaata ttgaagaata caaagatatt gcagataagc
     6841 attttaaagg caaaactttt aatgaagaac aatacaatca gctgataaaa ccatattcat
     6901 cgttgaacaa aaatgacaaa aaactcctct tgatggcatt gaatgataaa caaatagagt
     6961 ttaatcaaaa agaaatagaa gattgtataa aaatcttcaa acccacaagc aaagatcatg
     7021 acaaagcagt aaactatgta aaagaccttg ttggaacaag gcttattctg ccaaacggca
     7081 gtcttgttga gctggaacag gtagaaaaat acatttcaaa agccatacgt tacggcaaaa
     7141 taaaaataac aagaatgagc aactaccatg acaactatat tctgccatac atcaactatg
     7201 aaacagcaaa aaaatggaaa gaaacaatgc ctggcatggt gcttgttgaa aataaaaaag
     7261 taagaaaacg aaacggttac acaaccactc aattcaatat tgttcatccg ttaaaaaata
     7321 aaactacaca caaatcaaaa gattctgcaa aaagcaaagt atcaaaaaaa gcacaacata
     7381 tagaagaaaa taaattaaaa cagaaatatg ttttcggtga gcttcaaatc agaaccaaaa
     7441 aattaaatga catcggtcag atagaacatt taatatatga tattttggaa ggtaaagata
     7501 tttcgcaggg aatacctgag ctgcgcaaat attatgattc cacaggaatt gaaaaagccg
     7561 taaacgaagt gtttaatgac gatgtaaaag aagaaaatta catcaaatat gaaaattcta
     7621 tgtactattt tattcgtcac aacgaaacac gcaaaaagaa cggaccaaag tatttgaaac
     7681 ctatactctc tatgtatgag cttaagggtt atgaaatttt gggctttgat tcacttgcaa
     7741 gaatagataa agaagccgaa aaaattaaag aaaaatttcg caaatcacaa gaaaaggaat
     7801 aaataaaatg aaagttgcac tattcacaaa tccctattta tcaagcaatt acaaatatca
     7861 aacaaacaaa caggctcaac cgtcatttca aggaatgaca aacaaagtgc ctaaagaaat
     7921 taatgatgct ttttctatac taagaaaaaa agttgccact cttccggaaa gaggcagcaa
     7981 tgacgtactg acagtaaagc tcatagacag agcagatgaa gctgcctgtg tcacagttga
     8041 aagaaaaaga aaaaactggc ttttgtcttt tatctttgac aatacaaaag aagcaacaaa
     8101 agccgaagtt acacattcaa aaggcgacaa aaaagcaata caggctcttt tgaaagatca
     8161 agaaacaaaa aaagaattaa ataacttcct aacagaaaac ggagtcaatt ttaatacttt
     8221 ttaatctgta aaacaaaata ttaatcaatc cagccgccgc ctatcaggtg gcggtcttgt
     8281 ttgtcataaa aaactgcagc ctggcctgat gttattgaag caaccggttc atcaaaagta
     8341 ataacacctg tattattttc ataatccagt tttacaacag cgctttttgc ttccatgtta
     8401 taacggattt ttaccaatgc ctcaaactct gtcctgtcat tcgggtattg cattttaata
     8461 tcatgaatag tcagagattt ttgcatcagg tcgtcttgcg tgccaacata tacaacatta
     8521 ttttgcgcat caagttttac cacgtacaaa ggctctgccc atgcaatgcc tattcctttt
     8581 ctctggccga ttgtatactg ataaaaacct tcgtgtgagc caactttttg acctgtttta
     8641 ataaatataa aatcaccttt ttttacaccg aatttatccg ttatatactt ttttgttgtc
     8701 attggttttg taataaaaca aatatcctga ctttcttttg aagactttga cggtaaatca
     8761 ttttgagctg caatttgtct tatatcatct tttacataat cacaaagcgg gaacaaaata
     8821 cggctcaaat gtctctggtc gagttcaaaa agataatact gctggtcttt tttcaaatcc
     8881 tttgccggat acatcttttt aataccgtta tcatcaacaa tacgtgcata atgtccggaa
     8941 gaaacaaaat cacaacccag ctcatccacc gcaaagtcaa acaacctgcc ccattttatg
     9001 gtgcggttgc acaatatgca agggttggga gtttggcctt ttttataaga ctcttcaaaa
     9061 taatctatta catctttttt aaactctttg ctcaaatcca ttacataatg aggtatgcct
     9121 attttatcgg caaccttttt tgcattgttt gctatttgtt caaattttgc gtcatcaacc
     9181 attttgacgg taattgcaca aacatcataa ccctgatttt tgagcaaaaa gcaggttaca
     9241 ctgctgtcaa gaccgccgga cagggcaacg gcgactttac ccttattgga caaaatatcc
     9301 ctcaccttca tctgttaaag tgtattcagt atattcgctg gttcctgtta aatccggtac
     9361 tatcctgata agattttgat tcattgcatc ttcgattaca gaatggtcaa caggcttgcc
     9421 tgttaacgga accagttttg cattcaattg tttgatagta aatctttctt tgttttctat
     9481 attcaaaata tacaaagcag tgacaacaag gttgtctata gagttttgcg ggttataaga
     9541 atgcaaataa ccttcaaaat cggaaatcat atccactttt tctacaactt ctgttttagg
     9601 gttttgcatt gactcttcga gcgcacgctc aaagttaacc tcttcaacaa tattggcctt
     9661 ttgggcactg tcaaaaacag gagttgtcaa atcatttatg gaagaaagat tttttacatc
     9721 aataaaacca ctgcgttgaa caggttcttg gacattgtca tgctgttgtt cctgtgtttg
     9781 cgccgtcggt tggtgaggcg gttcaatata tgcaccgtgt acaatgccgt ttatccaatc
     9841 cgagagtttt tcttcaaaag taaatttatc cgttgttgaa aattcaaact ctaaatcacc
     9901 ttttttaatt ttaaaatagt attcgtgcat atttaatctt tcttatatct caaatcaagg
     9961 tgccttgctg catttgtctc atccaccctt ttcacaggtg tggtgtgagg agcgtcaaga
    10021 acattttgcg gtgaagtctt tacttcattg gctattttta tcataacatc agcaaaatca
    10081 tcaagtcgtg ctttattttc agattctgta ggctcaatca tcatagcttc cgacacaatt
    10141 aaagggaaat agactgtagg cgggtggaat ttataatcca ttaacctctt tgctatttct
    10201 aacgtgtgca caccgtcagc tttttggcgg tcaccggaaa gaacaaactc atgcatacaa
    10261 gtaaaatcgt aaggcaaatc ataataatct ttaagttttt ctttcaggta atttgcattt
    10321 aatacagcat cacaagaagc atctttaaga gtttttcctc tcataagaat ataggcgtat
    10381 gctttcacca gtacggaaaa attgccctga aattctttta cttttccaat tgtgtccggc
    10441 agatcatact ttctataata tttttgtccg tcaaaacaga tnnaatcctt taagaaaatc
    10501 agcaacacca acaggccctg cacccggacc gcctcccccg tgaggagtgg caaaagtttt
    10561 atgcaaattc aaatgcacaa tatcaaaacc cattaatctc ggatttgtaa tccccataat
    10621 tgcattaaga tttgctccgt cataataaag aagcgcgcct ttttcatgag caagtttaga
    10681 aatttcaaga atattttctt cgaacaaccc gagggtatta gggtttgtca tcatcattgc
    10741 agcaacttcg ccgtcatttt cttcaaaaag ttttttaaga tgttcaacat ctacctgacc
    10801 tttttcatta ctatccactt tcaagatatc aaatccgcac atgcctgccg aagccggatt
    10861 tgtgccgtgt gcagaatcag gaacaattac ttttttacgt tttaaatcgt cttttttctt
    10921 aaaatactgt tttacaatca tcatcccgca aagctcaccg tgcgcacctg ctgatggttg
    10981 aagggtaact gcatccatac ccgtaatttc ttttaaacat tcttgaagct taaacatcaa
    11041 ttcaagagcg ccttgagcgt cttcatcggc ctgcagcgga tgaagattgg caaacccatc
    11101 caatgaagca aggtattcat tgacttttgg gttgtatttc attgtacagg aaccaagagg
    11161 ataaaagcct gattctacac aaaaattttt gtcagacagt tctttaaaat gtctcattgc
    11221 ttcaagctcc gaaacctcag gcaaaacagc aggttctttt cttaaaaact gcggtctgat
    11281 aaagtctaaa gaaagctctt catcagttag agaaattcct gtcatacctt ttattgattt
    11341 ttcaaaaatt acttttgtag aattattcat cctgtacctt ctccttaata atattatgtt
    11401 aaggtttagc gagttgcgtg tcaacaaagt attttatata atttaaccta agaaggggct
    11461 tgtatgaaaa atttaaaaat tattattgca attttatgtg tgtgtctaat ttgtatagat
    11521 gctgtttatc ttttaacaaa accgcagaaa acagagcaaa aaacacccgc acagactact
    11581 aaagaggtgg ttttttggtc tttacaaatg ggtactttta acaactacat gaacccgttg
    11641 attgaacagt ttgagaaaga aaaccctgat ataaaaataa aatggataga cgtaccttac
    11701 tctgaaggag aaaaaagaac acttgcctct attttgagca caacaccgcc tgaccttgtg
    11761 aatcttaccc cggacttttc aagtgtactg gctcaaaaac aggctcttca ttacattgat
    11821 tgtaataaat tgaatgccta caatcctttg ataatagata tgctgaaaca agacggcaaa
    11881 tgttatgcaa ttccgtttta tgcaacttca tctttgactt tttacaacaa aaaaatactt
    11941 gatgattctg ccataacctc tattccaaag acttacgatg agatgaatgc acttgcgccg
    12001 aggataaaag aaaaaactgg taaattcgtt acaatgccga ctcttactga aaatgatacg
    12061 ctgcttaaaa tcttgaacaa gtacaatatt aatacccctg agtcacttgt ttcaaataag
    12121 tcggtaaaaa tattcaatga ttacaaatat ctttacaact ctgacctgat accaaaagaa
    12181 tcaattacac aaaatcatca ggaagctctt gaaaaat
//
LOCUS       DABS01000142            9067 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_14542, whole genome shotgun sequence.
ACCESSION   DABS01000142 DABS01000000
VERSION     DABS01000142.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 9067)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 9067)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9067
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..737
                     /locus_tag="CPT85_06170"
     CDS             <1..737
                     /locus_tag="CPT85_06170"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22470.1"
                     /translation="YPLEFTKGTSVQRTELARALNYRFFQNISKQFKSKDVSFDVFQK
                     TLDDACPFHKNISLIKSPNKGGAVTIKVNDESKNIIGYNMLIPANQFSGEIPLTTADT
                     FMHETAHYFSFMTNPKTIARIAKVYETELYLKTQNFYNSVLYSKNALPKQEIAAKLDE
                     LLSKLDPKERIDFLQNSRYRLKDELLAFSEGEKYQSLIQDIHSDKICYKIEAMKYSDY
                     NFEMKIDILEEKLAKELKDYRKNISL"
     gene            1119..1373
                     /locus_tag="CPT85_06175"
     CDS             1119..1373
                     /locus_tag="CPT85_06175"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22471.1"
                     /translation="MYDINSEPFRRRVDINLHINMKNGETENIFFTNLEFDIKNVLNN
                     IPSDSGIFIDAPINDNRLGQGIMYIVLVMILAFFMALIQG"
     assembly_gap    1604..1634
                     /estimated_length=31
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1730..>2485)
                     /locus_tag="CPT85_06180"
     CDS             complement(1730..>2485)
                     /locus_tag="CPT85_06180"
                     /inference="COORDINATES: protein motif:HMM:PF01435.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22479.1"
                     /translation="ANVERVNRIGKALLAKNNLPTKINFKVIETDEVNAFANADKEIC
                     VYTGMLKFVQNDAELAGVIAHEIGHIVNNHVAKQNVLGTITATAIYNANMDSRLKAGA
                     NAANNLTMLKMSRTEEYEADVTGVDLMTKAGYNPLAMVSVLYKISGNYADFTSTHPSG
                     DKRTMYIYDYITYTYPAKAKLGYTSDSYKKFMAYAGPIVKERNADPKKLASFKKKQAK
                     LKEKRIAKLEKYKTAKQSNGWDKSLNVIRFLSE"
     assembly_gap    2486..2504
                     /estimated_length=19
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2651..2992
                     /locus_tag="CPT85_06185"
     CDS             2651..2992
                     /locus_tag="CPT85_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006439806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22472.1"
                     /translation="MEIIIKEKTLMSKEDNSISFGMGLLAGIVGGVVAAILYAPKSGA
                     ETREDVKNYVNDFAQRHAPEIKEAKKQALESLDMMKYKLEKQYNKINEHIKAKQMAKA
                     REMEDQSYDFN"
     gene            3023..3382
                     /locus_tag="CPT85_06190"
     CDS             3023..3382
                     /locus_tag="CPT85_06190"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF948 domain-containing protein"
                     /protein_id="DAB22473.1"
                     /translation="MSTALTVSLILLVFVIMGAIIATTVYFVKLLIELTLLTKNLDET
                     TTIVKGELEPILGELKETMTNVNNLAKNADNQVATIRKIFATVIGFFTMFAGKFKFLQ
                     SSFFKGFISSFNLFRRK"
     assembly_gap    3575..3576
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3604..3765
                     /locus_tag="CPT85_06195"
     CDS             3604..3765
                     /locus_tag="CPT85_06195"
                     /inference="COORDINATES: protein motif:HMM:PF12732.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22474.1"
                     /translation="MLARNSEELKNKAEKTVKEIQGKAEDIVSDMQKKGDDIMEKIQT
                     MINSKKEEA"
     gene            complement(3841..5871)
                     /locus_tag="CPT85_06200"
     CDS             complement(3841..5871)
                     /locus_tag="CPT85_06200"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22475.1"
                     /translation="MSQINTIYPLIAANNNCKTKPYEPSFKSALPQFVESQELCSKEA
                     SIAISEQIKVLINLNSHEHFLDKNLTVAKVQDNISALYELSQQIAKSKSLSDLATFED
                     LCDDYFEGLKHGYDIHLESKKIKKCISSLDKFASNPANKNILKKIGDDLLAGIIFMGS
                     DDVSKFEKKTLNNYTKLFNNTVFEKFLEKISPELIIKNLTEDKNSNIVSKNIDILTKK
                     LALPEYAFITALDKPDIDIISFNGDINKLLDLLKSYNDKLRPSEKLDFVIDPQTNEAV
                     IAIKDEIGKDFYNKKVFVYDKYFNMLSTEGSTFGXVNKDNIRTQNTNLKDLRKNTTYQ
                     IHQFYDSKTKKWILDSQIKEEKDAAGKMISREFIKLSGVEGTYNIKVMDSKGRLHTTS
                     FAYKKPDGSVYIEKNLKSPQGIMTRVRYKNKPDKNGDIQAQIMDYVIYDKDGNELAKR
                     ESALSRLNNLCTTSSVNGKVHKVYTNNDKIRVVNESTGKITQIDLNEIIKDSDRELKE
                     FFKGLCGATLEELNDTVHSVYKATPLESSCIYEAGRLDVAPDEFILHHEKGHLLSHKN
                     GKSFVSNGFRNVSFFDSNKNNFSSDKKLMKIFQEEKQEYLNSLPRRIRLYAGYFINEY
                     LHDVKNGGLEEVVAETEALINSAKAPLWVLKRAHQLQENFPKTIAYIIKHRG"
     assembly_gap    4939..4940
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5931..7319)
                     /locus_tag="CPT85_06205"
     CDS             complement(5931..7319)
                     /locus_tag="CPT85_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_431140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="DAB22476.1"
                     /translation="MNIASNYNVAIIGAGPAGIFAALEIMKLKPDWKVVIVEKGLKIE
                     ERKCPLREGVPKCMNCRTCGLLCGWGGAGAFSDGKLTLTPDVGGHLLDYMSRDEVEKL
                     VKYTDDIYLKFGATEEVFGTNRDDFADIERAATLAELKLVHSPVRHLGTERSLGVLKN
                     MQDYLNENVTILNKTVAASLIVENEQVKGFVTTDGEEIRSEYLIIAPGREGADWLTKE
                     FAKNKIGMVNNAVDVGVRVELPAPVFSHITDKLYESKLVYHSKTFGDEVRTFCMNPYG
                     EVVAENYSGIATVNGHSYAEKRTQNTNFALLVSEKFTEPFKEPIAYGQHVARLANMLS
                     GGILVQRFGDLLDGRRSTPERIKSSIITPTLKCATPGDLSLVLPYRQMTAIIEMLQAL
                     DKIAPGVASRYTLLYGIEVKFYSGRVKLTKELETEQVKNLFTIGDGAGVTRGLIQASA
                     SGVHAARIICNR"
     gene            7485..8831
                     /locus_tag="CPT85_06210"
     CDS             7485..8831
                     /locus_tag="CPT85_06210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002585050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="DAB22477.1"
                     /translation="MEYLQEVLNGLKTKNSNEPEFLQAAYEVLTTLKPVIEKHPEFKI
                     NALLERITEPERLISFRVSWLDDNGQVQVNRGYRVQFNGAIGPYKGGLRFHPSVNQSI
                     MKFLAFEQCFKNALTGLPIGGGKGGSDFDPKGKSDNEIMRFCQSFMNELYRHIGQDID
                     VPAGDIGVGAREIGYLFGQYRKIRNAYEAGVLTGKGLEYGGSLARKEATGYGLIYFMR
                     EMLKANGSDIKGKTVTISGSGNVAIYACEKAQEYGAKVVAMSDSNGCIYDPDGIKLDV
                     VKQIKEVERGRIKEYANRVQGAVYTEGKGEERPIWKIKADIALPCATQNEINLEDAKI
                     LVSNGVKAIGEGANMPTNLEAIEYFLANGILLAPAKAANAGGVATSALEMSQNSMRYS
                     WTFEEVDEKLDRIMTNIFDACQKAAQEYNLGNNYVAGANIAAFDKISKAMIAQGII"
     gene            complement(8862..>9067)
                     /locus_tag="CPT85_06215"
     CDS             complement(8862..>9067)
                     /locus_tag="CPT85_06215"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22478.1"
                     /translation="VAVPFIIAGNQIGNVGANQEAHRYDKMQTEPVTLKPQEKIELKT
                     MALHRHAPSMRIXNEDCFCKSSH"
     assembly_gap    8896..8897
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         2977 a         1566 c         1543 g         2925 t
ORIGIN      
        1 catatcctct cgaatttaca aaaggcacat ctgttcaaag aactgagctt gcacgtgctc
       61 ttaattatag attttttcaa aatatttcta aacagtttaa atctaaagat gttagttttg
      121 atgtctttca aaaaacatta gacgatgctt gcccttttca taaaaatata agcctcataa
      181 aaagtccaaa taaaggaggg gcagtaacaa ttaaagtaaa tgatgaaagc aaaaatatta
      241 tcggatacaa tatgctgata cccgcaaatc aattttcagg agaaatccct cttacaacag
      301 ctgatacttt tatgcacgaa acagctcatt atttctcttt tatgacaaat ccaaaaacaa
      361 ttgcaaggat tgcaaaagta tacgaaacag agctctacct aaaaacacaa aatttttata
      421 actcagtatt atattcaaaa aatgctttac caaagcaaga aattgctgca aaacttgatg
      481 aattactttc taaattagat ccaaaagaac gtattgattt tttacaaaac tccagatatc
      541 gcctgaaaga tgaactcctg gcattttccg aaggtgaaaa ataccaaagc ctgatacaag
      601 atattcattc agacaaaatt tgctataaaa ttgaggcgat gaaatactca gattacaatt
      661 ttgagatgaa aattgatatt cttgaagaaa aacttgccaa agagttaaag gattatagaa
      721 aaaatatatc tttataaaat ggcaaattgc accctacctg ctaatatgtg ttgaacaggg
      781 ttcttaattt gactttttcg acaagaattg ataaattata caaatgaaaa atgttttcat
      841 ttataataat gcagctttta tgctcaaaaa gatttatttt attgttctgt ttttttgtgc
      901 attgttgcaa ttattttatc gatattgttg aataatccca atattctttt ggttatgccg
      961 ccttgtgtaa taggtatttt tatattttac tacaaagtcc cgctgaataa ttcaatgtac
     1021 tatagttcaa ttattattga taatacaaaa aatcaactat cgtttgtcac tatttacaac
     1081 caaaaaaagt ttttgaatat aaaaatattc agagcataat gtatgatata aattcggaac
     1141 cttttagaag aagagttgat attaatttac atattaatat gaaaaatggg gaaactgaga
     1201 atatcttttt tacaaatttg gaattcgaca taaaaaatgt tttgaacaat ataccttctg
     1261 atagtggtat atttattgat gctcctataa atgataaccg tcttggacaa ggaattatgt
     1321 acattgtatt agtaatgatt ttggcatttt tcatggcgtt gatacaaggg taaaaatcga
     1381 tatagtcgga gcaatatgga ctataaccat cttttcttta atgtttatta ttagttacaa
     1441 aattacgttg atgtaactaa agctcgctac tgctcattca atctgttcgc tatccggcat
     1501 gaatagagct ctcgccttgt gtgagttctc aaatccaaaa tctcaacaaa ataaaaagcc
     1561 ctgtaacaaa agttattggg ctttttatgg ggcgggtaat gggnnnnnnn nnnnnnnnnn
     1621 nnnnnnnnnn nnnncccgcc ataatttatt ggatttaata aaaatatatc aaataaaaat
     1681 tctttttcaa gtatttaatt aaaaagggca gaaaaactgc ccccattttt tattctgata
     1741 aaaatctaat tacatttaag gacttgtccc aaccgttaga ttgttttgct gttttgtatt
     1801 tttccagctt tgctattctt ttttctttaa gtttagcctg tttcttttta aacgaagcta
     1861 gttttttagg gtcagcattt ctttctttta caataggccc tgcatatgcc atgaattttt
     1921 tataagagtc agatgtatat cccagcttgg cttttgcggg ataagtgtat gttatatagt
     1981 cataaatata catagttctc ttgtcacctg atggatgagt agatgtaaaa tctgcatagt
     2041 ttccgcttat cttgtaaagt accgaaacca ttgcaagcgg gttgtagccg gctttagtca
     2101 taaggtccac accggtaacg tcagcttcgt attcttcagt tctggacatt tttagcatag
     2161 tcaaattatt ggctgcattt gctccagctt taagccttga gtccatattt gcattgtata
     2221 tcgcagtggc agttattgta cctaatacgt tttgttttgc gacgtggttg ttcacaatgt
     2281 gaccaatttc atgagcaatt actccagcta gttctgcatc gttctggacg aattttaaca
     2341 ttcctgtgta cacacaaatt tctttgtcgg cgttagcgaa tgcatttact tcatctgttt
     2401 cgattacttt aaaattgatt tttgtgggta gattattctt tgcaagcaag gctttaccga
     2461 ttctgtttac tctttcaaca tttgcnnnnn nnnnnnnnnn nnnnctaagc tgtaaaccaa
     2521 ataccagagc taaaaaaagc cctaaaatct tcttcataaa ttactccaat tagctaacac
     2581 tattaaatta taatatactt tgctattttt ggtagtgtaa aatctcgtaa aaaatgatat
     2641 actattctca atggaaatta taataaagga gaagacacta atgtcaaaag aggataattc
     2701 tataagcttt ggtatgggtt tgcttgcagg tattgtcggt ggagtggttg ccgctatttt
     2761 atatgcccct aaatcaggag cagaaacaag agaagacgtt aaaaattacg ttaatgattt
     2821 tgctcaaaga cacgctccgg aaatcaagga agctaaaaaa caggctctgg aatctcttga
     2881 tatgatgaag tataagcttg aaaagcaata caacaaaata aatgaacata ttaaagcaaa
     2941 acaaatggca aaagccagag agatggaaga ccaatcttac gatttcaatt aaagataaat
     3001 tactataatt taggagaaaa acatgtcaac agcacttacc gtaagcctta tacttttagt
     3061 atttgtaata atgggtgcaa ttattgcaac caccgtttac tttgttaaat tgttaataga
     3121 gcttactttg ctcacaaaaa accttgatga gacaacaaca attgtcaaag gcgagcttga
     3181 gccgattctt ggagaattaa aagaaacaat gacaaacgtt aacaaccttg caaaaaatgc
     3241 ggacaatcaa gttgcaacta tcagaaagat ttttgcaaca gttattggtt tctttactat
     3301 gtttgcaggg aaattcaagt ttttgcagag cagtttcttt aaaggtttta tttcttcatt
     3361 caaccttttc agaagaaaat aataaacatt tgtaaatatt gtacaatata cacccgtact
     3421 atagattagc ttgatgacaa acggggtatt ttatataaat aatcaagaaa atatctatta
     3481 acaaaaaagt aaataagtcc aaaggagaaa gattatgtca acaggaaaat ttttagcagg
     3541 tttcatagta ggcggagtag ttggagctgt tatgnncctc aatcaggtga agaaactcgt
     3601 gaaatgcttg caagaaactc tgaagaattg aaaaacaaag ctgaaaaaac agttaaagaa
     3661 attcaaggaa aagcagaaga tattgtttcc gacatgcaga aaaaaggcga tgatatcatg
     3721 gaaaaaatcc agactatgat taactctaaa aaagaagaag cataagcctg aataaagttt
     3781 caaaaccgct ccggattatt acttaaagaa ggagcggttt tagtttgcaa tttattatga
     3841 ttaacctctg tgttttataa tatatgcaat tgttttgggg aagttttcct gtagctggtg
     3901 agctcttttt agcacccaca acggtgcctt tgcactgttt ataagagctt ctgtctcggc
     3961 aacaacctct tcaaggccgc catttttaac gtcgtgaagg tattcattaa taaaatatcc
     4021 ggcataaagt cttattctac ggggtaaaga gtttaaatac tcctgttttt cctcttgaaa
     4081 aattttcatc aattttttat ccgagctaaa attgtttttg ttgctatcaa aaaagcttac
     4141 gtttctaaaa ccgttactaa caaaggattt tccattttta tgacttagaa ggtgaccttt
     4201 ttcgtgatgg aggataaact catcaggagc aacatccaaa cgtcctgcct catatataca
     4261 agaagattca agcggagttg ccttataaac agaatgaaca gtgtcattca attcttctaa
     4321 agtagcacca cacaatcctt taaagaattc tttcaattct ctgtcagaat ctttgattat
     4381 ttcatttaaa tctatttggg taatttttcc cgtagattca ttcacaacac gaattttgtc
     4441 attgttggta taaactttat ggactttgcc atttacagaa gaagttgtgc acaaattatt
     4501 taagcgagaa agtgcgcttt cccttttagc aagctcattt ccatctttgt cataaataac
     4561 ataatccatt atttgtgcct gaatatcacc gtttttgtca ggtttatttt tgtatcttac
     4621 acgtgtcata ataccttgcg ggctttttaa atttttttct atataaacag aaccatccgg
     4681 ttttttataa gcaaatgaag tggtatgcaa cctgcctttg ctgtccataa cttttatatt
     4741 gtatgtgccc tctacaccgg aaagtttaat aaattctctt gatatcattt taccggcagc
     4801 atctttttct tcctttattt gagaatccag aatccatttt ttcgttttgg agtcgtaaaa
     4861 ttgatggatt tgatatgtag tattctttct caaatcctta agatttgtat tttgagtacg
     4921 tatgttatct ttgtttacnn caccaaatgt tgaaccttct gttgaaagca tattaaaata
     4981 cttgtcataa acaaaaacct ttttattata aaaatccttg cctatttcat cttttattgc
     5041 aataacagcc tcatttgttt gagggtcaat aacaaaatcc aacttttcag agggtcttaa
     5101 cttgtcatta taacttttca acaaatcaag aagcttgttt atgtcaccat taaaactaat
     5161 aatatcaatg tcaggtttat ccaacgccgt gataaatgca tattcaggaa gtgcaagctt
     5221 tttagtcagt atatcaatat ttttgcttac aatgttagag tttttgtcct ccgtaagatt
     5281 tttaataata agctcaggcg atattttctc caaaaacttt tcaaaaaccg tattgttaaa
     5341 aagttttgta taattgttta aagtcttttt ttcaaattta cttacatcat cactccccat
     5401 aaaaatgata cccgcaagta aatcatcgcc tatttttttt aaaatatttt tattagcagg
     5461 gtttgatgca aatttgtcta aagacgaaat acatttttta atctttttag attccaaatg
     5521 tatatcatag ccatgtttca agccttcaaa ataatcatca cacaagtcct caaaagttgc
     5581 caaatctgac aatgatttag atttagctat ttgttgtgac agctcataaa gagccgagat
     5641 attatcttgc acttttgcta cagtcaaatt tttgtccaaa aaatgttcat gagaatttag
     5701 gttaataagt actttaatct gttcagagat tgctatactt gcttcttttg aacataactc
     5761 ttgagactca acaaattgcg gcagcgctga tttaaacgag ggctcatagg gtttcgtttt
     5821 acaattgtta ttggctgcta ttagaggata tattgtattg atttgtgaca taaaaatagt
     5881 tcctgcaatt tattaaaacg caggaactat tttttttacc atattgttaa ttatctgtta
     5941 caaattatac gtgcagcgtg cacaccggaa gccgaagcct ggataagacc tcttgtaaca
     6001 ccggcaccat cgcctattgt aaagagattt ttgacctgtt ctgtttccag ctcttttgtc
     6061 aatttaactc ttccggaata gaatttaact tctataccat aaagcagtgt atatcttgaa
     6121 gccactcccg gagcaatttt gtccaaagcc tgaagcattt caattatcgc tgtcatttga
     6181 cgataaggaa gaacaaggct caaatcacca ggtgtagcgc attttaaagt cggagtaatg
     6241 atgcttgatt ttattctctc cggtgttgag cgacggccat ctaacaagtc gccaaaacgt
     6301 tgaacaagaa ttccgccaga gagcatatta gcaagccttg caacgtgttg accgtatgca
     6361 attggttctt tgaacggttc tgtgaatttt tcactaacaa gcagtgcaaa gtttgtattt
     6421 tgcgttcttt tttcagcata gctgtgaccg ttaacagtgg caataccgct gtaattttct
     6481 gctacaactt caccgtaagg gttcatacaa aaagttctaa cttcatcccc gaaagttttt
     6541 gaatgataaa cgagttttga ttcatagagt ttatcagtaa tgtgagaaaa gaccggagcc
     6601 ggaagttcaa ctctgacacc cacatccaca gcattgttga ccatacctat tttgtttttt
     6661 gcaaactctt ttgtaagcca gtcagcgcct tctcttcccg gtgcaataat aaggtactca
     6721 gagcgtattt cttctccatc tgttgtaaca aaacctttta cctgttcatt ttcaacaata
     6781 aggctcgctg caactgtttt atttaaaata gtaacgtttt cattaaggta atcctgcatg
     6841 tttttcaaaa caccaagact tctttcagta ccaaggtgtc gcactggaga gtgaaccagt
     6901 tttaattcag caagagtggc agctcgctca atatcggcaa aatcatctct gtttgtacca
     6961 aaaacctctt cggttgcccc aaatttgaga tagatatcat ctgtatattt aacaagtttt
     7021 tcaacttcat ctctagacat ataatccaac aagtggccgc caacatcagg tgtaagcgtc
     7081 aatttgccgt cagaaaaagc acctgcacct ccccatccgc acaacaaacc gcaagtacga
     7141 cagttcatac atttaggtac gccttctctt aagggacatt ttctttcttc aattttcaaa
     7201 cctttttcaa ctatcaccac tttccaatca ggttttagtt tcataatttc aagtgcagca
     7261 aaaatccccg cagggccggc accaataata gccacgttgt agttagaagc aatgttcatt
     7321 cagacagttc cttatttttc ccatacattc tgattgtagc ttaaaaatat ttaaataata
     7381 caaaacataa atatttttct aaaaaattta caagtgctaa caggcagccc gattttgtgg
     7441 tataatttac cccaaaaaaa gaattattta attaaggagt atctatggaa tatttgcaag
     7501 aagtgttgaa tggattaaaa acaaaaaaca gtaacgaacc cgaattttta caggcagcat
     7561 acgaagtttt aacaacatta aaacctgtga ttgaaaaaca tccggaattt aaaatcaatg
     7621 cacttcttga aagaataaca gaacctgaaa gactgatatc tttcagagtt tcctggcttg
     7681 atgacaatgg tcaggtacag gtaaacagag gatatcgtgt tcaatttaac ggagcaatag
     7741 gaccttacaa gggcggttta agattccatc cgagtgtaaa ccagagtatt atgaaatttc
     7801 ttgcttttga acaatgcttc aaaaatgcac tcactggcct tcccataggc ggaggtaaag
     7861 gcggaagcga ttttgacccc aaaggtaaat cagacaatga aattatgcgt ttttgccaga
     7921 gctttatgaa cgagttatac agacacatcg ggcaggatat tgatgttccg gctggtgata
     7981 tcggtgtagg cgcaagagaa ataggatacc tttttggcca gtatagaaaa ataagaaatg
     8041 cgtatgaagc aggtgtgcta acaggaaaag gcctggaata tggcggttcg cttgcaagaa
     8101 aagaagctac aggctacgga ttaatttatt ttatgagaga aatgttaaaa gctaacggct
     8161 ctgatataaa aggaaaaacc gtcactattt caggctcggg aaatgtagca atatatgctt
     8221 gtgaaaaagc tcaggaatac ggtgcaaaag ttgttgctat gagtgattcc aacggatgta
     8281 tttatgaccc agatggtatt aaactggatg ttgtaaaaca aatcaaagaa gttgaacgag
     8341 gcagaatcaa agaatatgca aaccgtgtgc aaggtgctgt ttatacagaa ggaaaaggag
     8401 aagaaagacc tatctggaag attaaagcag acattgcact gccctgtgca acgcaaaatg
     8461 aaattaatct ggaagacgca aaaattcttg tttcaaacgg agtaaaagca atcggtgaag
     8521 gtgctaatat gccaacaaac cttgaggcaa tagagtactt cctggctaat ggaattctcc
     8581 ttgcaccggc aaaagctgca aatgcaggcg gagttgcaac ttcagctctt gaaatgagcc
     8641 agaattcaat gagatactcc tggacatttg aagaagtaga cgaaaaatta gacagaatta
     8701 tgacaaatat atttgatgca tgtcaaaaag cagcacaaga atacaacctc ggcaacaact
     8761 atgttgcagg tgcaaacata gcagcttttg acaaaatatc aaaagcaatg attgcacagg
     8821 gaatcattta gttttattta agctcaaggc tcatattttc atcagtgaga ggatttacaa
     8881 aaacaatcct catttnnaat cctcattgat ggtgcatgcc tgtgaagagc cattgtttta
     8941 agctcaattt tttcctgagg ctttaaagtc acaggttcag tttgcatttt gtcataacga
     9001 tgggcttcct gattggcacc gacattgcct atttgatttc ctgcaataat aaaaggcaca
     9061 gctacag
//
LOCUS       DABS01000143            8560 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12429, whole genome shotgun sequence.
ACCESSION   DABS01000143 DABS01000000
VERSION     DABS01000143.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8560)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8560)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8560
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..1174
                     /locus_tag="CPT85_06220"
     CDS             <1..1174
                     /locus_tag="CPT85_06220"
                     /inference="COORDINATES: protein motif:HMM:PF01424.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015186025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="DAB22437.1"
                     /translation="TTKLREISRLVADELHKRVVVVDTSNEIAGDGDTPHPAIGHARR
                     MQVTQPEFQKDIMIEAVENHTPEVIVVDEIGTEAEAQAARTIAERGVMLIATAHGNSL
                     ENLIKNPVLSDLVGGIQSVTLGDDEAKRRACQKTVLEREKQPTFDIVIEIIDRNTLAV
                     YPNTSEAVDCILRGWPIKPTIRKVDMTQPSEPTIVEKINQLDSKITSANNALNFSFSR
                     EKYVNEVKGYKKIYIYAVSRSIMDKSIERLNLNAELTKNIDDADIIIAHKNFAKGGNK
                     ILSIANEYRLPIYYVRSNSTSQVQKVLKEALGLKDDNTIVFHDETEEALDEAKEAIQK
                     VLQHGEDVELSPQSQQIRKMQHELVEQHNLSSVSVGDGNERHLKIVGGKEFKQDIV"
     gene            complement(1171..1401)
                     /locus_tag="CPT85_06225"
     CDS             complement(1171..1401)
                     /locus_tag="CPT85_06225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005705198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="DAB22438.1"
                     /translation="MSKEEYHYVFKQIGDNIRKAREAKRLSQEELAFLINSARNYIGC
                     IERAEKFASVTMLKKIADALDLKLADLFKECD"
     assembly_gap    1532..1533
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1677..2186)
                     /locus_tag="CPT85_06230"
     CDS             complement(1677..2186)
                     /locus_tag="CPT85_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012057412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin"
                     /protein_id="DAB22439.1"
                     /translation="MISEKMNAAFNDQIKAEMFSSNLYLSMVAYFEEIGLKGFANWMR
                     IQVQEENAHAMGLFDYLLERDGKVTIEAIEKPENEWACALDCFEAVYKHEQHVTSLIN
                     GLVDVAEQEKDRAAISFLQWYIKEQVEEEANCSEICQKLRLIGDDKHALLLIDQELGA
                     RTYVAPVIG"
     gene            complement(2212..2619)
                     /locus_tag="CPT85_06235"
     CDS             complement(2212..2619)
                     /locus_tag="CPT85_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012414194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="desulfoferrodoxin"
                     /protein_id="DAB22440.1"
                     /translation="MTKILEFYKCHVCGNFVEVVLPGAGELVCCGQPMERMREQTQSE
                     EMLGEKHVPVVSKEGDELTVRVGSVPHPMEDEHFIMFIEVNSPDKRYVKRKYLYPHEE
                     PVLKYKCSCDKVEARELCNIHGLWTSGEIDTNN"
     gene            2731..3285
                     /locus_tag="CPT85_06240"
     CDS             2731..3285
                     /locus_tag="CPT85_06240"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22441.1"
                     /translation="MTKRKAIMYLIIFAVLVTAAQTWKTNYLSDPASKLPDPCKMVIS
                     SQCQQYINKITAEKKYEETVAIQKIRIRENEQLLKFFKKKIQDKCLFEMTAQEADESL
                     QACIGTPKGKRDYFLLKTADFTIRDILVDSLAVSQMQYSELHDKKAAEKTLKHAKKII
                     KDNKYFEKRADAFKIIEKEMSELK"
     gene            complement(3293..4099)
                     /gene="pdxA"
                     /locus_tag="CPT85_06245"
     CDS             complement(3293..4099)
                     /gene="pdxA"
                     /locus_tag="CPT85_06245"
                     /inference="COORDINATES: protein motif:HMM:PF04166.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="DAB22442.1"
                     /translation="MVKDLNKKYNVLELPFEHSWLNIGKETKEAGDFSYNCILKACEL
                     AKAGKIKALVTAPVSKNAMHLAGHNFSGQTEVLEKNLANPAVDEKAEMLFVSKDLRVL
                     LLTRHVALKDVKITKELLLEKLKRINRVLKQNFGIPKPKIALCSLNPHAGENGILGNE
                     EIEVFLPAVKDLKNDGINVFGPFPSDTLFAKAVHPYVNGDAQPYDVYCACYHDQGLIP
                     VKVLAMNNTVNTTVGLSVIRTSPAHGTAYDIAGKNIADESSMICAIEAAL"
     assembly_gap    4106..4107
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4217..5521)
                     /locus_tag="CPT85_06250"
     CDS             complement(4217..5521)
                     /locus_tag="CPT85_06250"
                     /inference="COORDINATES: protein motif:HMM:PF17042.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22443.1"
                     /translation="MFISNNIGIIADDLTGADDTALQFHLRGANTQILLDSSIMPENK
                     ASTQVWAIPTETRNCDAHSAYERVKQATKILSEELNVEYFYKKMDSTIRGNIAVEALA
                     VLDALEWDAAVIIPAFPQEGRTTVGGYHLLKGIPIERTEYARDPRFPIYESHIPTVLR
                     NELQNEQEELVDLIELRTVIKGAGPILKKMNEMIENGVKLIVVDAMSVTDIEQVVLAM
                     EKSSYKILPCGSAGCAQVLGNIWLPETENHQTEKTIPSLPKLIVSGSATQLTASQLQK
                     LQDDDDIENTYFINLKMEDILEGVSDEIVERVSQNLIKDNVVVIHTSELTVDSKIISE
                     ILFENEMSKNQFISKIGDYLAAVTKKVLFNRDAILVTIGGETSFKCCKAINSSSLQII
                     DAICPAIPLCLDTKAQWIVTKSGNLGNSNTVIDIIKYFEHHE"
     gene            complement(5567..5902)
                     /locus_tag="CPT85_06255"
     CDS             complement(5567..5902)
                     /locus_tag="CPT85_06255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017295159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="DAB22444.1"
                     /translation="MINSVVLVGRAGQDPEMKYFESGKVKTTFSVAVSRWDSKTKAEV
                     TDWFNVELWDKLAEVAGEYVKKGKLVAIDGRLASSKWNDASGSQKERFFVRASNLRLL
                     SAGKADQQQ"
     gene            6042..6593
                     /locus_tag="CPT85_06260"
                     /pseudo
     CDS             6042..6593
                     /locus_tag="CPT85_06260"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    6175..6213
                     /estimated_length=39
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(6590..8137)
                     /locus_tag="CPT85_06265"
     CDS             complement(6590..8137)
                     /locus_tag="CPT85_06265"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EmrB/QacA family drug resistance transporter"
                     /protein_id="DAB22445.1"
                     /translation="MEKIENTNNNVQISPWLTTIAVMSAAFMFVLDGTIANVALPQMA
                     GSFSSSNDEATWILTSYLIASGIVVPSVDWFSKFFGRKQFFIACILIFTGASLLCGMS
                     TSLDMMIVSRVIQGVGGGALLPVAQAILLEAFPVEKRALAMSIFGFGVVVAPVIGPIL
                     GGWLTDNWSWNWIFFINIPFGILAAVTSKLWIFDPPYAQKQADAKIDYVGFFFLIVWL
                     VTFQVFLDKGNNADWFGSEWICWTFGISMIAMVLFIYSQIVQKDSIIDLSVFKDRSFV
                     LGTTILVIANMVLYASTTIMPLFLQNLMGYNAFWSGYSLMPRGFGSVLAIFIYSITNK
                     LFDFRLFTAIGIIGLGVSGLMFGFLNLEFSMINIIIPNFIFGFSVGMTITVLTTASME
                     TISNAKMTNASGVQNLVKNLGAAIGTSLVATMVSRYSQAFQHNMVGFLDPNNPVYAER
                     LASMTSFFCQFDVYAVAFQKAQGMLYNQLLQQSTLCAYMETFRVWGIVTFVCLPLLLL
                     YKNKSKA"
     gene            complement(8218..8553)
                     /locus_tag="CPT85_06270"
     CDS             complement(8218..8553)
                     /locus_tag="CPT85_06270"
                     /inference="COORDINATES: protein motif:HMM:PF01047.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22446.1"
                     /translation="MRLRGSLLLNELNADITLEQFITLDAISSSSDVCQRDLAKVLLK
                     DRSNVTRILNILEQKGLITREPANKGKRIVKYTRLTPKGRELMDKYADRMKNDLNDFL
                     SQFNQXXKI"
     assembly_gap    8229..8230
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         2803 a         1708 c         1400 g         2604 t
ORIGIN      
        1 aacaactaaa ttaagagaaa tctcgcgcct tgtcgcagac gaactccata aacgtgttgt
       61 tgttgtagac acatctaacg aaattgccgg tgacggagat accccccacc ctgcaattgg
      121 tcatgccaga agaatgcagg ttacacagcc cgaatttcaa aaagatatta tgatagaagc
      181 cgttgaaaac cacacccctg aagttattgt ggttgatgag ataggtacag aagcagaagc
      241 tcaagctgca agaaccatag ctgaacgtgg tgttatgctc atagcaactg ctcacggaaa
      301 ttctctggaa aatcttatta aaaaccctgt attatcagac cttgtaggtg gaatccaatc
      361 tgttacactg ggtgatgatg aggcaaaaag aagagcatgt caaaaaacag tgctggaaag
      421 agaaaaacag cctacttttg acattgtaat cgaaatcatt gacagaaaca ctctggcagt
      481 ctaccccaat acatcagaag ctgtggactg catattaaga ggctggccta ttaaaccaac
      541 catcagaaaa gttgatatga cacagccaag cgagcctaca attgtagaaa aaataaatca
      601 gttagacagc aaaattacat ctgctaacaa tgccttaaac ttcagttttt cccgggaaaa
      661 atacgtaaat gaggtcaaag gttataaaaa gatatacatt tatgcagtta gccgttcaat
      721 aatggacaag tcaatagaac gtcttaacct taatgctgag ctcacaaaaa atattgatga
      781 tgcagacata attattgctc acaaaaattt tgcaaaaggc ggaaacaaaa ttctaagtat
      841 tgcaaacgaa tacagactgc caatatatta tgtgcgttca aattcaactt cacaggtgca
      901 aaaagtcttg aaagaagcac tcgggctaaa agatgataat acaatagtct ttcacgatga
      961 gacagaagaa gcccttgatg aagcaaaaga ggctattcaa aaagtccttc aacacggtga
     1021 agatgtggag ttgtcccctc aaagccagca gattagaaaa atgcagcacg agcttgtaga
     1081 gcagcacaac ttatcctccg tcagtgttgg tgacggcaac gaaagacact tgaagattgt
     1141 cggcggaaaa gagtttaaac aggatattgt ttaatcacac tctttgaaca aatctgcaag
     1201 tttcaaatcc agtgcatccg ctatcttttt aagcatagtc acacttgcaa atttttctgc
     1261 tctttctata caaccaatat agtttcttgc agaattaata agaaaagcta actcttcttg
     1321 agacaaacgt tttgcttctc tagcctttct gatattgtcg ccgatttgtt taaacacata
     1381 gtgatattct tctttactca tgacacctat tgtgttacat gtaggttgtt ccttctacca
     1441 cctatagggg cgcatgaatg ataaaaaagg aaattattac gataataaac aaaatcgaac
     1501 aagaaaaaat gtgttgtaca actgcattag annaattgct aagtgaaatt ttattaaatt
     1561 tgagattact gctcaaaatt aaggaacaag gcctctataa cggcatatat aaagatttaa
     1621 aaaaataaaa atacaggctc tttttaaaaa gcctgtattt ttattttaat caaaacctaa
     1681 ccgataacag gtgcaacata ggttcttgca ccgagttcct gatcaatgag aagcagcgca
     1741 tgtttgtcat caccgatgag tcttaatttt tggcaaattt cagaacaatt tgcttcttct
     1801 tcaacctgtt ctttgatata ccattgcaag aatgaaattg cagctctatc tttttcttgt
     1861 tctgcaacat caacaagtcc gttaatcaaa gaagtaacgt gttgttcatg tttataaaca
     1921 gcttcaaaac aatctaaagc acaagcccat tcattttcag gtttttcaat tgcttctata
     1981 gtcactttac cgtcacgttc aagcagataa tcaaacaggc ccatagcatg agcgttttct
     2041 tcctgaacct ggattctcat ccagtttgca aaacctttga gtccgatttc ttcaaaataa
     2101 gctaccattg aaaggtacaa gtttgaagaa aacatttctg cttttatctg gtcattaaaa
     2161 gctgcattca ttttttcaga tatcatcttt aactcccttc ttaattactt tttaattatt
     2221 tgtgtcaatt tcacctgatg tccataaccc gtgaatatta cacaattctc ttgcctcaac
     2281 tttatcgcaa gaacatttat atttcaacac aggttcttca tggggataaa gatattttct
     2341 tttcacatat ctcttgtcag gagaatttac ctctataaac ataatgaagt gttcatcctc
     2401 cattggatga ggaacagaac ctactcttac tgtgagttca tctccttctt tagaaacaac
     2461 tggcacatgt ttttcaccta gcatttcttc actttgtgtt tgctctctca ttctttccat
     2521 aggttgtccg caacacacaa gctctcctgc tcctggcagc actacttcaa caaaatttcc
     2581 gcaaacgtgg catttataaa attctaaaat ttttgtcata aactaatctc ccttaacata
     2641 cgccagcatt ataaaacgga ttgaaaaaaa gtttattacc tgtttggctg ttaatgtgtt
     2701 atatttaaat tataaaaaag gagtttaaca atgaccaaac gcaaagcaat aatgtatttg
     2761 ataatatttg cagtacttgt tactgctgca caaacttgga aaaccaatta tctgtctgac
     2821 cccgcatcaa aattgccgga tccttgcaaa atggttattt ctagccaatg ccaacaatac
     2881 ataaataaaa ttactgcaga aaaaaaatac gaagaaactg ttgctataca aaaaataaga
     2941 atcagagaaa acgaacagct tttaaaattc tttaaaaaga aaatacaaga caaatgcctg
     3001 tttgaaatga cagcacaaga agctgatgaa tcgttgcaag cttgcatagg tacaccaaaa
     3061 ggcaaaagag attacttcct tttaaaaact gctgatttca caattaggga tatccttgta
     3121 gattctcttg cagtatcaca aatgcagtat tctgaattgc atgacaaaaa agctgccgaa
     3181 aaaacgctta aacacgctaa aaaaattata aaagataaca aatattttga aaaaagagct
     3241 gatgctttta aaattataga aaaagaaatg tcagagttaa aataattcta tattataaag
     3301 cagcttcaat agcacaaatc atactgcttt catcagcaat atttttgcca gcaatatcat
     3361 atgccgtacc atgagcgggc gatgttctta taacgcttaa tcctaccgtt gtgtttacag
     3421 tattattcat tgcaagaacc ttaacaggaa tcagcccctg atcgtgataa caggcacaat
     3481 aaacatcata aggctgtgca tccccgttta cataagggtg tacagccttt gcaaaaagcg
     3541 tatcagaagg aaacggtcca aaaacattta taccatcatt tttcaaatct ttaacagcag
     3601 gcaaaaacac ttcgatttct tcattgccaa gtattccgtt ttctccggca tgggggttga
     3661 gagaacaaag agctatcttc ggctttggta tgccaaaatt ttgctttaaa accctgttta
     3721 ttcttttcag tttttccaat agcaattctt ttgtaatttt tacatctttt aaagcaacat
     3781 gccgggtaag caaaagaact cttaaatctt tagaaacaaa gagcatttca gctttttcat
     3841 caacagcagg atttgcaaga tttttttcaa gaacctctgt ctggcctgaa aaattatgcc
     3901 cggcaagatg cattgcgttt ttagagacag gtgcagtcac aagcgctttt attttgccgg
     3961 cttttgccag ctcacaagct tttaaaatac agttgtaaga aaaatcgcct gcttcttttg
     4021 tttcttttcc tatatttagc cagctatgct caaatggcag ctctaaaacg ttatattttt
     4081 tgttaagatc cttaaccagc tcactnngct gcctatcagc agaatattct cttgaggaag
     4141 gtccaaacgg tttaaagctt ttacaacaat ttccggccct atgccattga aatcgccaag
     4201 cgttattgca atcggtttat tcatggtgtt caaaatactt tattatatca attacagtgt
     4261 tagagtttcc tagattgccc gattttgtga ctatccactg tgcttttgta tcaaggcaca
     4321 aaggtatagc agggcaaatc gcatcaataa tttgcaaact gctgctgtta attgctttac
     4381 aacatttaaa agatgtttcg ccgcctattg tcacaagaat agcatctcta ttgaataaaa
     4441 ctttttttgt cacagcagca agataatcgc caatttttga aataaactga tttttagaca
     4501 tctcattttc aaacaggatt tcagatatta tcttagaatc tacagttaat tcagacgtgt
     4561 gaataacaac aacattatct ttaataagat tttgagaaac acgctctaca atttcgtcac
     4621 tcactccttc aagaatatct tccattttca gattgataaa ataggtattt tcaatatcat
     4681 catcatcctg tagtttttgt aactgtgaag cagtaagctg tgtggcactg cctgatacaa
     4741 tcagttttgg cagagaaggg atagtttttt cagtctgatg attttcagtt tcaggaagcc
     4801 atatgttacc caaaacctgt gcacagcccg cagagccgca tggcaaaatt ttgtacgagc
     4861 ttttttccat tgcgagaaca acctgctcaa tatccgtaac ggacattgca tcaacaacaa
     4921 tgagcttcac accgttttca atcatttcat tcattttttt caatattggg cctgcgcctt
     4981 tgatgactgt gcgcagctca atcaaatcaa caagttcttc ctgttcattt tgcagctcat
     5041 ttcgtaaaac ggttggtata tgtgactcat aaataggaaa tctcgggtct ctggcatact
     5101 ctgttctttc aatagggata cctttaagca gatgatatcc gcccactgtt gtgcggcctt
     5161 cttgggggaa agccggaatt atgacagcag catcccattc aagagcatcc agcactgcaa
     5221 gtgcttctac tgcgatgttt ccacggattg tagaatccat ttttttataa aagtattcta
     5281 catttaattc ctctgacagt atttttgtag cctgtttaac acgctcatat gcgctatgag
     5341 catcacagtt tcttgtttcc gtaggaatag cccagacctg tgtgcttgct ttgttctccg
     5401 gcataattga agaatccagc aatatttgtg tattagcacc ccttaaatga aattgaagcg
     5461 ctgtatcatc agcgcctgtc aaatcatcag caattatccc tatgttgtta gatataaaca
     5521 tttttataat ctctatccct gattaaaacc acacttaaac aaatcactac tgctgttgat
     5581 cagcttttcc agctgaaagc agtcttaaat tagaagctct tacaaaaaat ctttcttttt
     5641 gagagccgga agcatcattc catttgctgg atgcaagtct gccgtctatt gcaacaagct
     5701 tgcctttttt aacatattcg ccggcaactt cagccagttt gtcccacaat tcaacattaa
     5761 accagtctgt aacttctgct tttgttttgg aatcccatct gcttactgca acagaaaatg
     5821 ttgtctttac ttttcctgat tcaaaatatt tcatttcagg gtcttgtcct gctctaccta
     5881 ccaatacaac tgaatttatc attgaaatgt cctttatatt tctaacaatt acatgcaatt
     5941 atattttaaa gaccaaaaga tttccagcat taaagcataa atgttaactt tgtaaaaaat
     6001 tattttttga caaagttaaa aataatatta ttatataatc tatgaacaag tttatcctta
     6061 cggcattatt tattttattg agtgtgtttg caaatcttaa cagagcttat gctgctactg
     6121 attatgcaac attatatgaa aaagcacagg ttcctgattt tgagcttgtc tttannnnnn
     6181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnntaagctc tacagtttat tttaaaaatc
     6241 agactgtacc tgccggatac tatatcctga caccacgggt aatgaaaaat cgagattatg
     6301 tcttttttaa agaagcagga aaagtcaaat atattattcc tgtggtaaaa aaagaacttg
     6361 ttcctgtcga cttttatcat aacaatctgc ctacaccaaa atatacaaag tggcaaagtt
     6421 tttgtaaaaa ctttagagaa aaattttata cagtgtttcg aaattcctct aaaaaagccc
     6481 ccccgccaaa atcatatgtt gtaacggaaa acattgaagg cgatatgtat ttgattgtgc
     6541 tctattacgg agaaacaaaa tattatatgg tatttaaatc aaataaatac taagctttac
     6601 tcttgttttt atacaacaat aacagcggca ggcatacaaa tgtcacaatc ccccagactc
     6661 tgaaagtttc catataagca caaagtgtgg attgctgcaa aagttgatta tacagcattc
     6721 cctgagcttt ttgaaaagca acagcgtaaa catcaaactg gcaaaaaaac gaggtcatag
     6781 atgctaatct ctctgcataa acagggttat taggatccaa aaaacccacc atgttatgct
     6841 gaaaagcttg agaatatctg gacaccatag tagcaactaa agaggtacct attgccgctc
     6901 cgaggttttt tacaaggttt tgcacaccgc tggcgtttgt catctttgca ttagagattg
     6961 tttccatcga tgctgttgta agcactgtaa ttgtcatacc aacagaaaaa ccaaaaataa
     7021 agtttggaat aatgatattt atcatagaaa attcaagatt caaaaaccca aacattaggc
     7081 ctgatacacc gagcccaatt atacctattg cagtaaaaag ccgaaaatca aacaacttgt
     7141 ttgttatgct gtatataaat attgcaagaa cactgccaaa acctcttggc ataagagaat
     7201 aaccgctcca aaatgcgttg tatcccatca aattttgtaa aaataaaggc attatggtag
     7261 tagaagcata caaaaccata ttggctatta caagaatggt tgtacccagc acaaaacttc
     7321 tgtctttgaa tacagacagg tctataatgg aatccttttg tactatttga gaataaataa
     7381 aaagtaccat tgcaatcata gagatgccaa aagtccaaca aatccactcg gagccaaacc
     7441 agtcagcatt gtttccttta tcaagaaaaa cctgaaaagt tacaagccaa acaatcaaaa
     7501 agaaaaatcc cacataatca atctttgcat ctgcctgttt ttgcgcataa ggagggtcaa
     7561 aaatccataa ctttgaagta acagccgcaa gtataccaaa cggaatgtta ataaagaaaa
     7621 tccaattcca cgaccagtta tcagtcagcc atccccccag aatcggccca ataacaggag
     7681 caacaacaac cccaaaaccg aatatagaca ttgcaagcgc acgcttttct acaggaaaag
     7741 cctccagcaa aatggcttgt gcaacaggca aaagcgcacc gccgccaaca ccttgtatca
     7801 ccctagatac tatcatcata tcaagagatg tggacattcc acacaacagt gatgcacctg
     7861 taaaaatcaa aatgcatgct ataaaaaact gctttcttcc aaaaaacttg gaaaaccagt
     7921 caacggaagg tacaacaatt ccgctggcta taaggtagct ggtcaaaatc catgttgcct
     7981 catcattgct tgaggaaaaa ctgccagcca tctgcggcag agcgacattt gcaattgtcc
     8041 cgtccaaaac aaacataaaa gctgcgctca ttacggctat tgttgtcagc cacgggctta
     8101 tttgcacatt gttatttgta ttttcaatct tttccatatt accggacact taaatttgta
     8161 agtttgcgtt ttcgcttatt ttgttggaaa tttcttccag cattttttcc ataattttta
     8221 aatcttttnn ttttgattaa attgagaaag aaaatcatta aggtcatttt tcattctgtc
     8281 agcatattta tccatgagct cacgtccttt tggtgtgagt ctggtatatt ttactattct
     8341 tttacctttg ttggccggct ctcttgttat caggcctttt tgttccagaa tatttaagat
     8401 tcttgtgaca ttagaacggt cttttaataa tacttttgcc aggtctcttt gacagacatc
     8461 actgcttgag gagattgcat ccagagtaat aaactgttca agcgtgatat cagcatttag
     8521 ttcgtttagc aaaagcgacc cgcgcagcct gatatagaca
//
LOCUS       DABS01000144            8463 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_7774, whole genome shotgun sequence.
ACCESSION   DABS01000144 DABS01000000
VERSION     DABS01000144.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8463)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8463)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8463
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            172..>515
                     /locus_tag="CPT85_06275"
     CDS             172..>515
                     /locus_tag="CPT85_06275"
                     /inference="COORDINATES: protein motif:HMM:PF00586.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-monophosphate kinase"
                     /protein_id="DAB22413.1"
                     /translation="MRELEFLKVIQNTLADSSLIGDDCAYLEEFDICVTQDTLVEGVH
                     FLTHTTTPFKLGQKAVNVNLSDLAAAGARPLYITISLSLPRASDENFVQSFYQGVQDS
                     CQKYGVKVAGGD"
     assembly_gap    516..570
                     /estimated_length=55
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            571..800
                     /locus_tag="CPT85_06280"
                     /pseudo
     CDS             571..800
                     /locus_tag="CPT85_06280"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     start; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    762..784
                     /estimated_length=23
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    967..973
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1044..1727
                     /gene="ispD"
                     /locus_tag="CPT85_06285"
     CDS             1044..1727
                     /gene="ispD"
                     /locus_tag="CPT85_06285"
                     /inference="COORDINATES: protein motif:HMM:PF01128.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="DAB22414.1"
                     /translation="MIKLSVIVTAGGSSSRYGKTNKLLEKIDEKEVIIRSIQAFLPYT
                     SIMPAEIIVSASESLEPQIKELLKKYDIKNVKVVRGGATRQASVFNALKACDKPDYVA
                     IHDAARPLIKHEDIQKCLELAMSKKAAIVAVKAVDTIKVVKQDGEIINTPDRDTLWAV
                     QTPQIFDYEMILDVHKKLEGQSFSDDAGMAEASGIKVFVSEGSYSNIKITTKKDIFLA
                     RMLFEDDAQ"
     assembly_gap    1839..1840
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1993..2511
                     /locus_tag="CPT85_06290"
     CDS             1993..2511
                     /locus_tag="CPT85_06290"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22415.1"
                     /translation="MYYLKNTLFLELTKNQKASLFSFIKSFVKKHNANNLSVDDILEL
                     FIEDEKYYYEQKNPHFEWIIQEFDKDKFLKELKILIKENLKQLELKEAQKPFLEKQKA
                     LAKEQRKKAAEFKLSKEEPTKKQLYYYDKLCQKYKLDKKDTNGLSRLDLKNLIGKIIE
                     DENQHTKENGFD"
     gene            2474..3214
                     /gene="prmC"
                     /locus_tag="CPT85_06295"
     CDS             2474..3214
                     /gene="prmC"
                     /locus_tag="CPT85_06295"
                     /inference="COORDINATES: protein motif:HMM:TIGR03534"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-(glutamine-N5) methyltransferase,
                     release factor-specific"
                     /protein_id="DAB22416.1"
                     /translation="MKTNTLKKTDLIKRYTQCGFSVEEASAEIDFAIDILCGLTPKDL
                     IIGVMPSPKDLEKLDAIVTRRLTTREPMAQILGYAYFMGNKFEVTKDTLIPRPETELL
                     VNKAVEIIKANELKQIMDIGTGSGCIACMIAKKTNAQVLGVDISNGALKVSLNNAMHL
                     DLMNRALFRKSDLFAKIREEEKFDMIVSNPPYIPPHVKETLQIEVKDYEPSSALFTTD
                     EDGLEFYEKISNQACSFLNKNGYLLXXR"
     assembly_gap    3205..3207
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3455..3994
                     /locus_tag="CPT85_06300"
                     /pseudo
     CDS             3455..3994
                     /locus_tag="CPT85_06300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008677212.1"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="reverse rubrerythrin"
     assembly_gap    3762..3817
                     /estimated_length=56
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4065..4358)
                     /locus_tag="CPT85_06305"
     CDS             complement(4065..4358)
                     /locus_tag="CPT85_06305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018509203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="DAB22425.1"
                     /translation="MNKEELVQEVSKKSKVTQKETAEIINALMETIEKTVAKGKKVTL
                     VGFGTFEARKRAARTGRNPQTGKEIKIAAKTVPAFSAGKKFKEAVDGKVAAKK"
     gene            4550..5161
                     /locus_tag="CPT85_06310"
     CDS             4550..5161
                     /locus_tag="CPT85_06310"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22417.1"
                     /translation="MIRPQAFSLAEALITLLIVCIIAIATVPVITKKSRPNPSKVIWV
                     ADTMVKTAVTPSAQRDIKLGDATGHVKQGIVITGTMYFKDRNGKVIGWISEDGNTSFA
                     QGNDYDFNAMSQRQEMLMNMLQNLTAQLNNVKNPSDYSNTDSSAGSSQRLSKIRKARE
                     SRQKNRLRNDYSDNSSRHTVETDTEQIQQQLNSLMELLNTQQR"
     gene            5172..5621
                     /locus_tag="CPT85_06315"
     CDS             5172..5621
                     /locus_tag="CPT85_06315"
                     /inference="COORDINATES: protein motif:HMM:PF14437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="DAB22418.1"
                     /translation="MIKPWNEYFLEIAKTCSCRSNCFRAKVGAVIVGEDKKIKATGYN
                     GTPSKVTSCYEIGKCYRIENNIPSGTRYETCRSIHAEQNAIIQAGQDRCKDATMYIYG
                     HNFICILCKRFIVQAGIKDVYLQKDENSPVEYVTVEQIRQELDADRP"
     gene            5667..>5894
                     /locus_tag="CPT85_06320"
     CDS             5667..>5894
                     /locus_tag="CPT85_06320"
                     /inference="COORDINATES: protein motif:HMM:PF01327.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="DAB22419.1"
                     /translation="MSIKKIVKYGDETLRRKSKEVSKVSKKIQTLVHDLLDTMYAQNG
                     VGLAAPQIGENLRVFVIDVSTGNEPLNPMVFI"
     assembly_gap    5895..5910
                     /estimated_length=16
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5930..6262
                     /locus_tag="CPT85_06325"
     CDS             5930..6262
                     /locus_tag="CPT85_06325"
                     /inference="COORDINATES: protein motif:HMM:PF01327.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22420.1"
                     /translation="MSFPEAYTDVKRYADVTVKALNIHGKPFIVEGKEGSLLARAIQH
                     EFDHLDGILFIDHCRNRFEADRILTEKGLSPVEADKILNEPELDKALESVPANPGETV
                     VPEGCEGD"
     gene            6177..7196
                     /locus_tag="CPT85_06330"
     CDS             6177..7196
                     /locus_tag="CPT85_06330"
                     /inference="COORDINATES: protein motif:HMM:PRK00005.1-2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="DAB22421.1"
                     /translation="MNLNWTKHWNLCPQTLVRQLYRRAVRVINAVYMATPEIAVNCLQ
                     KLLNFNDLNIQAVVTQPDRPCGRGKKLTAPPVKDFALAHNIEVLQTESLKNDEALKSK
                     LRELNPDFFITFAFGQLLTEEILAIPKIATINLHASLLPEYRGANPIQRAIYDGKEET
                     GITTMLTVLALDAGDICIQEKIKITPDMTDKELMEIISDKAPFIMYPTIKQLYNKMLT
                     PKKQDESLVTIAKKFKKEDALLDWNRSAQELHNHVRSMTTWPCACSSIDGKNIKILKT
                     TVLENECVNDNPGEIVKISKDGIAVAAKKGILLITELKPEGKPKMDAYAWTNGVQLKV
                     SDMFK"
     gene            7208..7576
                     /gene="aroH"
                     /locus_tag="CPT85_06335"
     CDS             7208..7576
                     /gene="aroH"
                     /locus_tag="CPT85_06335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003153463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="DAB22422.1"
                     /translation="MFSRGIRGAITIEEDNQEMLEQATIELYSKMIDLNGIKTEDISH
                     IIFTLTKDIKSAFPAKFVRRNFDVQYVPFICVNEMDIEPSLKHCLRVLMVVNTDKKQN
                     EIKHVYLGGAKILRSDLVSE"
     gene            complement(7594..8070)
                     /locus_tag="CPT85_06340"
     CDS             complement(7594..8070)
                     /locus_tag="CPT85_06340"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22423.1"
                     /translation="MTRPVIDKRNQYNNYNNHYTNVQNPIKTPVIDGYFPTHKTYKEM
                     AITRVNRSLCSILILFILTSAVSYYFVTASEITLNKYRKQALALNDENVELQNKLDYL
                     KSYYNVDKAMQKQHLLQKAKNVIEVKDAPATAPVRNTALDKVAQASQKQFQWSMGF"
     gene            complement(8072..>8463)
                     /gene="mraW"
                     /locus_tag="CPT85_06345"
     CDS             complement(8072..>8463)
                     /gene="mraW"
                     /locus_tag="CPT85_06345"
                     /inference="COORDINATES: protein motif:HMM:PF01795.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="16S rRNA
                     (cytosine(1402)-N(4))-methyltransferase"
                     /protein_id="DAB22424.1"
                     /translation="QIIKNAVPKTKEKIHTATRTFQAIRIEVNQELQNIKNTLNEVLT
                     LLSVDAIISVISFHSLEDRLVKQCFKYYASKCRCKPTDPVCHCKPPMLELINKKPITA
                     TELETKENPPSRSAKLRVAKKISSWEN"
BASE COUNT         2804 a         1367 c         1642 g         2488 t
ORIGIN      
        1 tgcaatatca atgcttggtc agctgctttg ctcaatactt atgataacta ttgtcggaat
       61 aatctttatt cctattgtat atttttatat ctatcttgtg atagcagaat tgtgtgctca
      121 atttgtgctt agtgcaagag ataaagaata atcttatgtt aaaattaacc tatgagagaa
      181 ctcgagtttc ttaaggttat acaaaataca ttggcggatt catcgcttat cggcgatgat
      241 tgtgcttatt tggaagagtt tgatatttgt gtaacacaag atacccttgt ggaaggcgtt
      301 cattttttaa cacatacaac aacaccgttt aaactcggcc aaaaagcagt taatgtaaat
      361 ctttccgatc tggctgccgc aggagcccgc cctctttata taaccatatc gctttcattg
      421 cccagagcat cagatgaaaa ttttgtacaa tctttttatc aaggcgtgca agacagctgc
      481 caaaaatacg gcgtaaaagt tgcaggcggg gatttnnnnn nnnnnnnnnn nnnnnnnnnn
      541 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gctttgcaca aaaaggcgat ataattctta
      601 ctacaggtac acacggagac agtgcagccg gtctggcgct tttacaaaac ggtattaata
      661 aacctaaaaa tcttatcaat aaacatctag tgccgctgcc ggcaattgag caaagcgaat
      721 atatcatgca aactctgaaa gatgcgggta tagaaaaatt gnnnnnnnnn nnnnnnnnnn
      781 nnnnttttca aactttctaa agcaagtaat ctcgagtttg atatagaaac aattccggcc
      841 ggcaaggatt tgaagactac tttcccaaaa gactggaaag actatgccct ctggggcgga
      901 gaagactttg agcttatatt tacaatccct ccgtttttgt acaaatattt taatactccg
      961 caatttnnnn nnnaggccgt tttctaatgc gttagaaaaa gaatttgaac aaaagagttt
     1021 taagcatttt gaggaataat acgatgataa agctatctgt aatagttaca gcaggaggct
     1081 cttccagccg gtatggaaaa accaataagc ttctggaaaa aattgatgaa aaagaagtta
     1141 tcatccgttc tatacaggca tttttgccct atacttcaat tatgccagca gagataatag
     1201 tttcagcttc agaaagcctg gagcctcaaa taaaagaatt gcttaaaaag tatgatataa
     1261 aaaatgtgaa agttgtacga ggcggtgcga caagacaggc ttctgttttc aatgctctaa
     1321 aagcgtgcga caagcctgat tatgtggcta ttcacgatgc agcacgtcct ttgataaagc
     1381 atgaggatat acaaaaatgc cttgagcttg caatgagcaa gaaagctgcc attgttgcgg
     1441 tcaaagctgt ggatacaata aaagttgtta aacaggacgg ggagattatt aatactcctg
     1501 atagagacac tctctgggct gttcagacgc ctcaaatttt tgattatgaa atgatattgg
     1561 atgtgcataa aaaacttgag ggacagagct tttcagatga tgcaggcatg gcggaagcat
     1621 caggtattaa ggtttttgtt tcagagggca gctattctaa tattaaaata acaacaaaaa
     1681 aagacatatt tcttgctcgt atgctttttg aagatgatgc gcaataattt gtggtgctaa
     1741 gtttttatat atatagcatt agtcaaaaaa atgagttaaa ataataaaat ggacaaggtt
     1801 tcagatatca caaaaatatt ggagaaaaag gctgttgann gagaaaaatc tcaaaagctc
     1861 tgaaacatct gcagcaaaaa atcaaaacgt gaataaggct acaaacccga tactcaaaaa
     1921 actggcctgt tttaaaaatg acaatctgtc caaaaaattt gatatcaatg atttaatata
     1981 gtaattaaga taatgtatta ccttaaaaat acactttttt tagagcttac aaaaaaccaa
     2041 aaagcgtcac ttttcagttt tataaaaagc tttgtaaaaa aacacaatgc caataacctg
     2101 tcggttgatg atatacttga gctttttatt gaagatgaaa aatattatta cgagcaaaaa
     2161 aatcctcatt ttgaatggat tatacaggaa tttgataaag ataaattcct gaaagagcta
     2221 aaaattttga ttaaagaaaa tctgaaacag cttgagctca aagaggcgca aaaacctttt
     2281 ttggaaaaac aaaaggcatt ggcaaaagaa caacgcaaaa aagcggcaga gttcaaactt
     2341 tcaaaagaag aaccaactaa aaagcagctg tattattatg acaaactgtg ccaaaaatat
     2401 aaattggata aaaaagatac aaacggcttg tccagattgg atttaaaaaa cctgatagga
     2461 aaaattatag aagatgaaaa ccaacacact aaagaaaacg gatttgatta aaagatatac
     2521 tcaatgcggt tttagcgttg aagaggcttc tgccgaaata gattttgcta tagacatcct
     2581 gtgcggtctg acacccaaag atcttataat cggtgtcatg ccttcgccaa aagacctgga
     2641 aaaactggat gccattgtta cacgacggct tacaacacgc gagccaatgg cacagattct
     2701 tggctatgct tactttatgg gtaacaagtt tgaagtaact aaagataccc ttattcctcg
     2761 tccggaaaca gagctgcttg ttaataaggc ggtggaaatt attaaagcaa acgaattaaa
     2821 gcagataatg gatataggca caggcagcgg ctgtatagcc tgcatgattg caaaaaaaac
     2881 aaatgcccag gttcttggtg ttgatatttc aaacggtgct ttaaaggtct ctttgaataa
     2941 tgcaatgcac cttgacctta tgaacagagc tctttttcga aagtccgacc tttttgcaaa
     3001 aattagagaa gaagaaaaat ttgacatgat tgtctctaat ccgccctata tcccacctca
     3061 tgtaaaagaa acgctccaaa ttgaagtaaa agattatgag ccatcgtcag ctctttttac
     3121 aactgatgaa gatgggcttg agttttatga aaaaatttca aatcaggcat gcagcttttt
     3181 gaataaaaac gggtatttgc tcttnnnccg gtgacgggca ggcgtttatg ataaaagata
     3241 ttatggagaa aaacaatttt tcaaatatag aaatattaaa tgatgtgagt ggtgtaaaac
     3301 gcgttgtagt cgggcggttt gcttgatttt atttagtgct tgcattttca attaagagtg
     3361 tgtataataa tcttattagg aatgattctt aataagatta tttcttaagg tccttcttaa
     3421 tggtgaatta tggtaaatat gaaagaggtt aattatggca aaatttgtat gttcagtatg
     3481 cggatacgta cacgaaggcg acgctgcacc ggctaaatgc cctatgtgtg gtgttggtcc
     3541 tgaaaaattt aataaagtag aagaaggcgc aggagcaatc ggctgggctg atgagcacag
     3601 aatcggtgta ggcgctgatg ttgatgcaga agttaaacaa ggcttaaaag atcacttcct
     3661 gggcgaatgc acagaagtag gtatgtacct tgctatgagc agacaagctg atagagaagg
     3721 ctatcctgaa gttgctgaag catataaaag aattgcgtgg gnnnnnnnnn nnnnnnnnnn
     3781 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnaac cttgaaatgc gtgtagaagc
     3841 tgaatcaggc gcttgtgcag ctaaaaaagc tattgcttca agagctaaag aactcaacct
     3901 tgatgctatt catgacacag tacacgaaat gtgcaaagac gaagctcgtc acggtcaagc
     3961 attccagggc ttattaaaaa gatacttcgg ttaatatccg ataaaaatag taaaaaaaat
     4021 acctgaactg ttaagttcag gtattttagt tttaaaaaga aaaactattt tttagcagct
     4081 actttgccgt caacagcttc tttgaatttt ttaccagcag agaaagcagg aactgtttta
     4141 gcagcgattt tgatttcttt accagtttga gggttgcggc ctgttctagc agctcttttt
     4201 ctagcttcaa aagtaccgaa gcctactaaa gtaacttttt tacctttagc aactgttttt
     4261 tcaattgttt ccatcaaagc attgatgatt tcagctgttt ctttttgagt aactttagat
     4321 tttttagaaa cttcttgtac taattcttct ttgttcatag tatgtaaacc ccttttctta
     4381 aaatgtacat tcttaattat attggaatac aaaattatag caagtacttt tttgcctttt
     4441 ttttcatctg tttgttggtt tttttttaat tcaaaatgta ataaagcctt tactttggcg
     4501 ttcaaagcac ataaaatatt aatattgtcg acaataaaag ggtatgaaga tgatacgacc
     4561 acaggcattt tcgctggcag aagcactaat tacattatta attgtctgca tcattgctat
     4621 tgcaacagtg ccggtaatca caaaaaagtc tcgtcctaat ccttcaaaag ttatctgggt
     4681 ggctgatact atggtaaaaa ctgctgttac tccttctgct caaagagata ttaaactggg
     4741 tgatgcaaca ggacatgtta agcagggtat tgttataaca ggtactatgt attttaaaga
     4801 ccgcaatggc aaagtaatag gctggatatc agaagacggt aatacgtctt ttgcacaggg
     4861 caatgattat gatttcaatg caatgtcaca acggcaggag atgttaatga atatgttaca
     4921 aaatctaact gcacagctta ataacgttaa aaacccttct gattatagca atacagattc
     4981 ttcagcgggt tcttctcaaa gactttcaaa aatcagaaag gcaagagaat caagacagaa
     5041 aaacagattg aggaatgatt actctgataa ttcatcaaga cacactgtag agactgatac
     5101 agaacaaata caacaacaac tcaattcact tatggaatta ttaaatacac agcaaagata
     5161 aggataaaaa gatgattaaa ccctggaatg aatatttttt ggaaatagca aaaacctgct
     5221 catgccgctc aaattgtttt agagcaaagg tgggtgcagt tattgttgga gaagacaaaa
     5281 aaataaaagc aacaggttac aacggcacac cctcaaaggt tacctcttgc tacgaaattg
     5341 gcaaatgtta ccgtatagaa aacaatattc catccggtac aagatatgaa acgtgccgca
     5401 gtatccatgc cgagcaaaat gcaattatac aagcgggtca agatagatgc aaagacgcta
     5461 caatgtatat ttacggtcac aacttcattt gtattttgtg caaaagattc attgtgcagg
     5521 caggtataaa agatgtttat ctgcaaaaag atgaaaactc tcctgtagaa tatgttactg
     5581 tggagcaaat aaggcaggag cttgatgcag atagacctta aactgtgtta ttcttttatt
     5641 aagattagat tttaaaggat aaaaatatgt ctataaagaa aatagttaaa tatggtgatg
     5701 aaaccttacg aagaaagtct aaagaagtct caaaggtttc taaaaaaata caaactcttg
     5761 ttcatgacct tttggataca atgtatgcac aaaacggtgt tgggcttgct gctccgcaaa
     5821 ttggagaaaa cctcagagta tttgttattg atgtttctac aggcaacgag ccgttaaacc
     5881 ctatggtgtt tattnnnnnn nnnnnnnnnn cagcagctat gaaggttgct tgagctttcc
     5941 ggaggcatat accgatgtaa aaagatatgc agatgttacg gtaaaagctc ttaatatcca
     6001 cggaaaacct tttattgttg aaggaaaaga aggaagcctt cttgcaagag ctatacaaca
     6061 cgagtttgac catctggacg gaatactgtt tattgaccac tgcagaaata gatttgaagc
     6121 agatagaatt ctgacagaaa aaggattgtc tcctgttgag gctgacaaaa tactcaatga
     6181 acctgaactg gacaaagcat tggaatctgt gcccgcaaac cctggtgaga cagttgtacc
     6241 ggagggctgt gagggtgatt aacgctgtat atatggcaac acctgagatt gccgtaaact
     6301 gtcttcaaaa actcttgaat tttaatgatt tgaacataca ggctgttgtt acacaacctg
     6361 acagaccctg tggaagagga aagaaactta ctgcgccgcc tgtaaaagat tttgcattgg
     6421 ctcataatat tgaggttttg caaacagaat ctttaaaaaa tgatgaggca ttgaagtcaa
     6481 agcttagaga attgaatcct gattttttca ttacatttgc atttggccag cttttgacag
     6541 aagagattct tgctattcca aagattgcta ctataaatct gcatgcttca ctgcttccgg
     6601 aatacagagg tgccaatcct attcagcgtg caatatacga tggtaaagaa gaaacaggca
     6661 tcacaactat gttaacagta ctagcacttg atgcaggtga tatctgtatt caggaaaaaa
     6721 taaaaattac acctgatatg acagataaag agcttatgga aataataagc gacaaggctc
     6781 cgtttattat gtatccgacg attaaacagc tttataacaa aatgcttaca cccaaaaaac
     6841 aagatgagag ccttgttact attgcaaaga aatttaaaaa agaagacgct ctgctggatt
     6901 ggaaccgctc ggctcaggaa ttgcacaacc atgtacgttc tatgaccact tggccttgtg
     6961 cttgcagctc tattgacgga aagaacataa aaattcttaa aaccactgtt ctggaaaatg
     7021 aatgtgttaa cgataatccc ggtgaaattg taaaaatttc caaagatggg attgcggttg
     7081 ctgccaaaaa aggtatactg ttaataacag aattgaaacc cgaaggaaaa ccaaaaatgg
     7141 atgcgtatgc ttggaccaac ggggttcagc ttaaagtaag cgatatgttt aagtaaggag
     7201 taattttatg ttctcaagag gcataagagg tgctattaca attgaagaag ataatcagga
     7261 aatgctcgaa caagcaacta ttgagcttta ctccaagatg attgacttaa atggtataaa
     7321 aaccgaagat atctcgcata ttatctttac tttaacaaaa gatatcaaat ctgcattccc
     7381 tgcaaagttt gtgcgtcgca attttgatgt tcagtatgta cctttcattt gtgttaatga
     7441 aatggacata gaaccaagtt taaaacactg tttgcgagtc ttaatggttg taaacactga
     7501 caaaaagcag aatgaaataa agcatgttta tctgggtgga gcaaaaatct tgcgctctga
     7561 cctggttagt gaataaaaaa atactttagg ctattaaaat cccattgacc attggaattg
     7621 tttttgtgat gcctgtgcca ctttatcaag tgctgtattt ctaacaggag ctgttgcagg
     7681 tgcatctttt acttcaatta cattttttgc tttttgaagc aggtgctgtt tttgcatagc
     7741 tttatcaaca ttgtaataag attttaaata atcaagtttg ttttggagct caacattttc
     7801 gtcattaaga gcaagtgcct gttttctgta tttgttcaac gtaatttcac tggcagttac
     7861 aaaataatag ctgactgccg aagttaaaat aaataaaata agtattgagc acaatgatct
     7921 gttcactcgt gtaattgcca tttctttata agttttgtgg gtggggaagt atccgtctat
     7981 tacgggtgtt ttaatagggt tttgaacatt tgtataatga ttgttgtagt tattatattg
     8041 attgcgctta tcaattacag gtcttgtcaa tttagttctc ccatgacgaa attttcttag
     8101 ctaccctcaa ttttgcagat cttgacggag ggttctcctt agtctctaat tctgttgccg
     8161 ttatcggttt tttgttaatt aactcaagca ttggaggctt gcagtgacaa accgggtctg
     8221 tcggtttgca gcgacatttt gacgcataat acttgaagca ttgtttaaca agtctatctt
     8281 ctaaagagtg aaaacttatt acactaatta tagcatcaac agataataaa gtaagcactt
     8341 cgtttagtgt atttttaata ttttgtaatt cttggtttac ttctatgcga attgcttgaa
     8401 acgtgcgggt tgcggtgtga attttttctt ttgttttggg aacggcattt tttataattt
     8461 gtg
//
LOCUS       DABS01000145            5058 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_8338, whole genome shotgun sequence.
ACCESSION   DABS01000145 DABS01000000
VERSION     DABS01000145.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5058)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5058)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5058
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(126..1865)
                     /locus_tag="CPT85_06350"
     CDS             complement(126..1865)
                     /locus_tag="CPT85_06350"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22392.1"
                     /translation="MISRITQSQVQPKTLKQNQQNNNKSSNPSFKGPVEMGTQVLNYL
                     NTSPAVGACFVDFFSMVLPRTLVDFSRSADAGMETGFRESSGTINHAAAGVVGLGAGY
                     LVSSAFNKSNGVKAHLLFANNETIDKLGSIVEAGKVNGKYDAKAYWTNFFNSIEGYNT
                     TDGKNAWKTIDANTVEKLSDVMTKVPENTYKTPKATMAEALELVTGETGAGSTFRFKG
                     TNIEGSAENLIDNAYAMRKTVVDRLAKINKDLKQGEVPKAVIEDLGELLKGIKNKKVA
                     TVVAGLAVPVGVGMSVQPLNRYLTKKRTGSDGFVGVEGREPDKTFGFKVLKTVLGLGI
                     GSAMIATILKNPKELYTNIGSAGKEILSKLQYKGPVPTMNQFKFIYGMTIMSRIFAAR
                     DKNETRESVIKDTLGFANWLILGGFVSKLAAKAFDKNIVNYEKAEGKGLWDYITKSVE
                     KTHEEILYPALKKLNISAMENGKKLPFRKLVGKVKEAAAQNTPNAEVAQKALSQLKYK
                     NYAQLLGYVYSGVVLGWGIPKLNIAITKAVEGKKTAKADSASEKMKVAQNPVAQPLEP
                     ASKTFSAFGAYLN"
     gene            complement(1878..3512)
                     /locus_tag="CPT85_06355"
     CDS             complement(1878..3512)
                     /locus_tag="CPT85_06355"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22393.1"
                     /translation="MINKVSINNQEVYKKGQTNPSYKNSQSPSFKGPVELITAGLQAC
                     NTNPMVGVSVIDLATAIVPRTVVDAKTNGFAAAETFRRESSGLIVNCLIPGFIVLGIA
                     KLMEAFNKGNKGLSGMWANQEALETLKDHYKQSDGTAKGFISRLFEDAEVLNGKKWEK
                     LKPKSLENELSQYAEIIEKNVQDKAVIEKARNNLYNKILKVTGGAEHIKIHGKVYHDN
                     ITTLLRDGVDVGQKFVIDLKKDHRAIEAFVKKATKFVNKKSLLGLAVVIPLAASMQSI
                     NRWITRKSSGQDGAPIYKNFGKGKKKEEMTPAQKSAFWSKKIGAAGLMTGVAMLSMMK
                     KPSLKMLQFTKNMPSMDQCRWIATATFASRMLAAEDENELHEVTWRDIATFSSLYFLG
                     DYVSKAVGTIMQKVKGVPLLNYMEKRPDTKNPLKKFVYWVKDTKLKSFDEANAIKDGI
                     VKIKDKNGVEKILEYKGGAKAKGLRAICEVSSLGFSMLVLGILVPWYVRKETERKEQL
                     KLKEKLKDFISYPSIMSTSNKKTFQAFGMMLDQSKQ"
     gene            3879..4136
                     /locus_tag="CPT85_06360"
     CDS             3879..4136
                     /locus_tag="CPT85_06360"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22394.1"
                     /translation="MADNFINQPFGMNIKIPKKTLKQIEKTAQQHTGGIFEPLFNFID
                     ENQKVFTGDIANEIQKYNLMSYNVGAALRHGNTNGGFDVKG"
     gene            complement(4222..>5058)
                     /gene="alr"
                     /locus_tag="CPT85_06365"
     CDS             complement(4222..>5058)
                     /gene="alr"
                     /locus_tag="CPT85_06365"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="DAB22395.1"
                     /translation="SFDRAAQNNISVSVFSDEHIEACRQTYEKLKIKPKVHVKIDTGM
                     NRIGVRPDKAVEFIEKIRACDFIELEGIFTHFATAETESYACEQYEQFKSVVDNVDTK
                     GLLVHCCNTAAVACYKDFDYNMARVGIGIYGLQPDLIKGAKEPFLKPAMSLKGRITNI
                     HIADADEGVSYSHTFETVRKTKIATIPIGYADGVFRGLSNKIYGIINGKKVKQIGNIT
                     MDQMMFDITDCDAQEGDIITLLGRDGEEYIGVDEWAKILGTIHYELTCALRVRLPRVY
                     TR"
BASE COUNT         1425 a         1009 c          873 g         1751 t
ORIGIN      
        1 ccttttcttt gttttcatgc aaattatata taaaatataa ttatttttca aaagataatt
       61 acaatatatt aagtatgtgc aatgtttgca cataaatata ttaatcattc aggcagactt
      121 ttctcttaat tcaaatatgc accaaatgcc gagaaggttt tgcttgctgg ctctaggggc
      181 tgcgctacgg gattttgagc aaccttcatt ttttcagaag cgctatcagc ctttgccgtc
      241 tttttgccct caactgcttt ggtgattgca atattcagtt tcggtatgcc ccatccgagc
      301 accacgcctg aatatacata accaagcaac tgtgcatagt ttttatattt aagctggcta
      361 agtgcttttt gtgcaacttc tgcattcggg gtattttgtg cagctgcttc tttaactttt
      421 cctaccagtt ttctaaacgg aagtttttta ccgttttcca ttgcactgat attgagtttt
      481 ttaagagcag gatacaggat ttcttcgtga gttttttcta cagattttgt aatataatcc
      541 cacagtcctt ttccttcagc tttttcatag tttacaatat ttttatcaaa agcttttgct
      601 gcaagtttag aaacaaaacc gccgagaatc agccagttag caaaacccag tgtatctttg
      661 ataacagatt ctctagtttc atttttgtca cgtgctgcaa atatacggct cataattgtc
      721 ataccgtaaa taaacttaaa ctggttcatt gtaggcaccg ggcctttgta ttgcagtttg
      781 gataaaattt ctttgcctgc actgccgatg tttgtgtaaa gctctttagg attttttaag
      841 atagtagcta tcatagcaga gccaatgcca agacccaaga cagtttttaa caccttgaat
      901 ccgaatgttt tgtcaggttc tcggccttcc acaccaacaa agccgtctga acctgtacgt
      961 tttttggtca aatatctgtt aagaggctgt acgctcatac ctacacctac aggaacagcc
     1021 agaccggcaa caacagtggc cactttttta tttttaatac ccttgagcaa ttcgccaagg
     1081 tcttcgataa cagcttttgg aacttcgcct tgtttaagat ctttgttgat ttttgcaagc
     1141 ctgtccacaa ctgtttttct catagcataa gcattatcaa tgaggttttc tgcagagcct
     1201 tcaatatttg tacctttaaa cctaaaggta gaacctgcac ctgtttctcc tgtaacaagc
     1261 tcaagagctt ctgccatagt ggcttttggt gttttataag tattttcggg aacttttgtc
     1321 ataacatcag acagtttttc aacagtattt gcgtcaattg ttttccacgc atttttaccg
     1381 tctgttgtat tgtagccttc tattgaattg aagaagtttg tccaatatgc ttttgcgtcg
     1441 tatttgccgt ttactttacc ggcttctaca atagagccaa gtttgtcgat agtttcgttg
     1501 ttagcaaata agagatgtgc cttaacgccg ttagacttat taaatgccga agacacaaga
     1561 taaccggcac caagacccac aacaccggca gccgcatggt taatggttcc tgatgattct
     1621 ctgaaacctg tttccatacc ggcatcagca gaacgggaaa agtcgacaag tgttctgggt
     1681 aaaaccattg agaaaaagtc gacaaagcaa gcacctacag cagggcttgt gttaaggtaa
     1741 tttaatacct gagtacccat ctcaacaggg cctttaaaac tcgggttgga tgatttatta
     1801 ttattttgtt gattttgttt taatgttttc ggttgtactt gtgattgtgt aattcgggaa
     1861 atcatatttt tacctgttta ttgttttgat tggtccaaca tcatgccaaa cgcctgaaaa
     1921 gtttttttgt tgctagtaga catgattgaa ggataagaaa taaaatcttt taatttttcc
     1981 ttaagcttca gttgttcttt tctttcggtt tctttacgca cataccaagg aaccaaaata
     2041 ccgagtacaa gcatagaaaa tccgagtgag cttacttcgc atatagccct aaggcctttt
     2101 gccttggcgc cgcctttgta ttccaatatt ttttcaacgc cgtttttatc ttttattttt
     2161 acaattccgt ctttgatggc atttgcttcg tcaaagcttt tgagttttgt atctttaacc
     2221 cagtatacaa atttctttaa cggatttttt gtatcggggc gtttttccat ataatttaga
     2281 agaggtacac cctttacttt ttgcattata gtaccaacag ctttagaaac atagtcccct
     2341 aagaaatata aactggagaa tgttgcaata tctctccaag ttacttcgtg gagctcgttt
     2401 tcatcctctg ctgcaagcat tcggcttgca aaagtagctg tggcaatcca tctgcactga
     2461 tccatggaag gcatgttctt tgtgaattga agcattttaa ggctgggctt tttcatcata
     2521 gaaagcattg ccacacctgt catcaaaccg gctgcaccga tttttttact ccagaatgca
     2581 gacttttgag caggagtcat ttcttctttt ttcttgcctt tgccaaagtt tttgtatata
     2641 ggagcaccgt cttgtcctga tgatttacgg gttatccatc tgttaattga ctgcattgaa
     2701 gctgcaagag gaatcacaac agcaagacca aggaggctct ttttgtttac aaattttgtt
     2761 gcttttttta caaaagcttc tatagcgcga tgatcttttt taagatcaat tacaaatttt
     2821 tgacctacat ccacaccgtc acgtaagagc gttgtaatat tgtcgtggta aactttacca
     2881 tgaattttta tgtgttcagc accgcctgtt actttaagga ttttgttgta caggttattg
     2941 cgcgctttct caattactgc tttatcttga acattctttt caataatttc agcgtattgg
     3001 ctcagttcat tttcaaggct tttgggtttt aatttttccc attttttgcc gtttaatact
     3061 tctgcatcct caaacagtct tgaaataaag cctttggctg ttccgtcaga ctgtttatag
     3121 tggtctttta atgtttctaa agcttcctga tttgcccaca tgcctgaaag gcctttatta
     3181 cctttgttaa aagcttccat aagcttggca ataccaagca caataaaacc cggtatcaaa
     3241 cagttaacaa taagtccgga agactcacgt ctaaaggttt cggcagcagc aaacccgttt
     3301 gttttggcat ccacaacagt ccttggtaca atcgcagttg caaggtcaat aacagataca
     3361 ccgaccatgg ggtttgtgtt acaagcctgc agacctgctg ttataagctc cacaggacct
     3421 ttaaaactcg gggattgaga atttttatat gaaggatttg tttgtccttt tttgtaaact
     3481 tcctgattgt taatacttac tttgtttatc ataattttag tctagccaat gtctttgtat
     3541 aaaacccaga ggtgattaat gctctattat catatgaaag acctgctata aatacaaatc
     3601 acctcaaaaa aaaaattgct agtttaaaat gttaaatttt ttaaacacct gcagtgaaat
     3661 atgatttttt atttaacaat acaaatattt taagattatg tgtacatttt acgcttaatc
     3721 gtttttgcgg tgtcttaaag tcatattaaa attcattttt acaaaactta acataaattc
     3781 gatttcatat ttctttacaa ataatacaaa atcattaaag tttatttgaa ggttagtcga
     3841 tatatatatc acaacacagt aaaacagggg tgatgcaaat ggcagacaac tttataaacc
     3901 agccttttgg catgaatata aagattccta aaaaaactct aaaacaaata gaaaaaacag
     3961 cgcaacagca cacaggcggt atttttgaac ctctgtttaa ttttattgat gaaaatcaaa
     4021 aagtttttac aggcgacatt gctaacgaaa tacaaaaata caatcttatg tcatacaacg
     4081 taggtgcagc cctgaggcac ggaaacacaa acggaggctt tgacgtaaaa ggttaaaaaa
     4141 gatataacca tcatctattt aaaatacccg tatattttaa ttgagttttg tgaaccgctc
     4201 aaataaatat acgggtattt tttagcgtgt ataaactctc ggcaaacgca cacgcagtgc
     4261 acatgtgagt tcataatgta ttgtgccgag tattttagcc cactcgtcaa caccgatata
     4321 ttcttcaccg tcacggccta aaagtgtgat aatatcgcct tcctgtgcgt cacaatcagt
     4381 tatatcaaac atcatctgat ccatggttat atttccgatt tgtttaacct ttttgccgtt
     4441 aattatcccg tatattttat tggaaagtcc acgaaatacg ccatcagcat agcctatggg
     4501 gattgttgca attttggttt ttcgcactgt ttcaaaggta tgagaatagc tcacaccctc
     4561 gtcagcatct gcaatatgaa tatttgttat tctgcctttt aaagacattg caggttttaa
     4621 aaaaggttcc ttagctcctt ttatcaaatc cggctgaagc ccataaattc ctatacctac
     4681 acgtgccata ttgtagtcaa aatccttgta acacgcaact gcagccgtat tgcagcaatg
     4741 aacaagcaga ccttttgtat caacattatc aacaacgctt ttaaactgct catactgctc
     4801 acaagcgtaa gattctgtct ctgctgtagc aaagtgtgta aatatcccct caagctctat
     4861 aaaatcacag gctcttattt tttctataaa ttctactgct ttgtcaggac gcacaccgat
     4921 tctattcatt cccgtatcta tttttacgtg gactttgggt tttattttca gtttttcata
     4981 tgtctggcgg caggcttcta tgtgttcatc cgaaaagact gaaacagaaa tattattctg
     5041 agctgctctg tcaaaaga
//
LOCUS       DABS01000146            5062 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_11794, whole genome shotgun sequence.
ACCESSION   DABS01000146 DABS01000000
VERSION     DABS01000146.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5062)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5062)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5062
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            211..1512
                     /locus_tag="CPT85_06370"
     CDS             211..1512
                     /locus_tag="CPT85_06370"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22367.1"
                     /translation="MSFNPLKEKGIPVEKQLRSWHEIARKPFNKTEVDCYSRTRQILM
                     NGIEVEAWNFKHNFSRNCPDTDINKFIAQTRRIEDMQQTTVNWLTPADQSVLETTLGY
                     EQVAVDLTAWMAQNEPDPYVKETFDFGLLEDFDHLYRYSQWAYFEHGXNDIVQGQTDI
                     MLSRPTQNHHNDNRLRLRKPYDKATADPQTKVNIYTLVAGEQQTHNYYAEHGMEYGNQ
                     CIRETYAEIKDVEEEHVSMYESLIDPTESWFEKLLLHEFVEVCTYYNCMEDEENERLK
                     KIWEMFMEYEIGHLQIAADLFRKNEKRDPEEVIGTKVVLPCRFMSQKPYVTNILENEI
                     DKRLDTEMGYTTIDKLPEDWPSYDVQETVNEEGSPTEMVIQVMAAAKGRDLVIADKKL
                     KKKEADLLQKGLEPKAQAPDTVSPEQMKEMMEEEEIEHECD"
     assembly_gap    659..660
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1549..2100)
                     /locus_tag="CPT85_06375"
                     /pseudo
     CDS             complement(1549..2100)
                     /locus_tag="CPT85_06375"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1604..1635
                     /estimated_length=32
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2412..4259)
                     /locus_tag="CPT85_06380"
     CDS             complement(2412..4259)
                     /locus_tag="CPT85_06380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015757543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="DAB22368.1"
                     /translation="MAKTIGIDLGTTNSVVAVMEGGKPTVIANAEGSRTTPSIVGFSK
                     TGEKLVGQLAKRQAILNPDKTIISIKREMGTDFKKNINGKDYTPQEISAMILRKLADD
                     ASAYLGEKVTSAVITVPAYFNDAQRQATKDAGKIAGLDVLRIVNEPTAAALAYGLEKE
                     KPEKVLVFDLGGGTFDVSVLEIGDGVHEVLSTSGDTHLGGDDFDEKIMNWLIEEFKKT
                     EGIDLKNDKQAMQRLKEAAEKAKCELSSVVETNINLPFITADANGPKHLDVQLTRAKF
                     EELSHDLLERCKKPVADALQEAGLSKGEIDEVVLVGGSSRIPAVQALVKEFTGKDPNQ
                     SVNPDEVVAVGAAVQAGVLAGEVKDIVLLDVTPLTLGIETLGGVMTPLVPRNTTIPVS
                     KSQVFSTAENNQTAVDVHVLQGERPMAKDNKSLGMFRLDGIPPAMRGLPQIEVTFDID
                     ANGIVNVSAKDKATNKEQKITITNSSNLSESDIDRMVKEAEANAEEDKKHKEEAEIRN
                     NANSLISSAERIVKDFEGKISDDDKSKLEDQRKALEEALKTNKPADEIKKMSEDLQQT
                     MYAISQAAYSQVQQESNAGTDAGADNTGSTENNSAGSDDDVIDAEYTKE"
     gene            complement(4435..4869)
                     /locus_tag="CPT85_06385"
     CDS             complement(4435..4869)
                     /locus_tag="CPT85_06385"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013007688.1"
                     /note="Decarboxylation of S-adenosylmethionine provides
                     the aminopropyl moiety required for spermidine
                     biosynthesis from putrescine; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine decarboxylase proenzyme"
                     /protein_id="DAB22369.1"
                     /translation="MTAPDVYHVDTNAKYLGQHVLAEFFECDPNILNNSQKVESLMID
                     AALECGATIVQKCFHMFSPHGVSGVVIISESHLAIHTWPELGYAAVDLFTCGDKCDPK
                     VAYEFLKKAFHSTKASFSELKRGKIDAASHVSETPFEIAAQF"
BASE COUNT         1578 a          899 c          897 g         1654 t
ORIGIN      
        1 cagaaggtaa taaagtacta caagaaagca atatagctga aattttattt gaaactgttg
       61 ataaaacagc acaaaagtct gaacttatgg gtaagcaatt atagcagttt cggcgattaa
      121 aaatcagctt tcttatttta tcctcaaaac aagtttccgt gtattcggcg gcttgttttt
      181 tcattaaaag ctaaaaagaa aggtaaaaaa atgagtttta atccgttaaa agaaaaaggc
      241 atccctgttg aaaaacagct gcgcagctgg catgaaattg cccgtaaacc ttttaataag
      301 acagaagtag actgctactc aagaacacgt caaattttga tgaacggtat tgaggtagag
      361 gcgtggaatt ttaaacacaa tttttcgcga aactgtcctg atacagatat taataagttt
      421 attgcccaga cacgccgcat tgaagatatg cagcaaacta ccgtaaactg gcttacaccg
      481 gcagaccagt ctgtacttga gacaactctt gggtatgaac aggttgcagt agaccttaca
      541 gcatggatgg cgcaaaatga gcctgaccct tatgtaaaag agacttttga ttttggtttg
      601 ttagaagact ttgaccacct ttacagatac agtcagtggg cgtattttga acacggaann
      661 aatgatattg ttcagggaca gacagatatt atgctcagcc gacctactca aaatcaccat
      721 aacgataaca ggctaagatt gagaaaaccg tatgacaaag caactgcaga ccctcaaacg
      781 aaggttaaca tttatactct tgttgccggt gagcagcaga ctcacaacta ctacgccgaa
      841 cacggtatgg aatacggaaa ccagtgtatc agagaaacct atgcagagat taaagacgtt
      901 gaagaagaac acgtttcaat gtacgaatct ttaattgacc caacagaatc ctggttcgaa
      961 aaactcttgc ttcatgagtt tgtagaggtt tgtacatact ataactgtat ggaagacgaa
     1021 gaaaacgaaa gattgaaaaa aatctgggaa atgtttatgg aatacgaaat aggacatctt
     1081 cagatagctg cagacttgtt cagaaaaaat gaaaagcgcg accctgaaga ggttataggt
     1141 acaaaagtag ttttgccgtg caggtttatg tctcaaaaac catatgtaac aaacattctt
     1201 gaaaatgaaa ttgacaaaag acttgatact gaaatgggct acacaacaat tgataaactg
     1261 cctgaagatt ggccaagtta tgatgttcaa gaaactgtta acgaggaagg ctctccaaca
     1321 gaaatggtta ttcaggtaat ggccgcagca aaaggcagag accttgtgat tgcggataaa
     1381 aaactcaaga aaaaagaagc agacctttta caaaaaggac tggagccaaa agcacaggct
     1441 cctgatactg tttcgcccga acaaatgaaa gaaatgatgg aagaagaaga aattgaacac
     1501 gaatgtgatt aatttctttt aaataataga taaaaggggc tttatgaatt atcttccgat
     1561 aatctcttca aggctccttt tatttttttt gaaatttatc ctgnnnnnnn nnnnnnnnnn
     1621 nnnnnnnnnn nnnnnataga catagcgatt ttgggcggaa aagttattta taatgtaatt
     1681 ttcagcctta tctgcaaaat cagccgattc tattggattt tgcatgtcca ttaaaagaag
     1741 ttttttaata agcattgttt ttaataaaat ttcaggctct atattacttg agttttcctg
     1801 ctttttgtat aatcttctta atataccttc cacatctgtc aatggtacag tttttttaat
     1861 aatatcattg ttacatttat gagcggcttt caggatgttt aaatcttgtt ttagtaaagc
     1921 cagacaggat tttgatgatt ttttctcaaa acaatgcctg tttacttttt catacctttg
     1981 cctgtcaacg tgtaattctt ttttgttcaa atccaattta aaacttactg caaaaaatgg
     2041 taaaacaatt aataaaatca gtattaataa agaaagtatg atttttgtat ttttttccat
     2101 aaactccgac cattttccct tgttcgcttt ttgggggtat aatgatttgg taaccagaac
     2161 atattaaggc aaaatactat ggaaagtaaa gataaaaatt tatcaaataa aaagaagtct
     2221 cctgaaataa aaataaaaaa tatgggtgtg gacatcgaca aaaacgaata tagagaaatt
     2281 gtcctgtcta actctgcgcg tcctgaagct tctttttacg atagatacag ataaaagatc
     2341 aaaatataat taaaaaaaag ccctcaaata ttgagggctt ttctcttttt cgtttaagat
     2401 aagtgtataa cttattcttt agtgtattca gcatcgatta catcatcatc agaaccggct
     2461 gagttgtttt cagttgagcc tgtgttgtct gctccggcat ctgtgccggc attagattct
     2521 tgctgaactt gagagtaagc tgcttgagaa attgcataca tagtttgctg taaatcttct
     2581 gacatttttt tgatttcatc agcaggtttg tttgttttca atgcttcttc aagagctttt
     2641 ctttgatctt caagcttgga tttgtcatcg tctgatattt taccttcaaa gtcttttacg
     2701 attctttcag ctgaagatat taagctgttt gcattgtttc tgatttcagc ttcttctttg
     2761 tgttttttat cttcttctgc gttagcttca gcttctttaa ccattctgtc gatatcagat
     2821 tctgaaaggt tagaagagtt tgtaatcgta attttttgtt ctttgttagt tgctttatct
     2881 tttgcagata cattaacaat accgttggca tcgatatcga aagtaacttc gatttgtgga
     2941 agccctctca tagccggcgg aataccgtct aaacggaaca tacctaaaga tttgttatct
     3001 tttgccatcg gtctttcacc ttgcagtacg tgaacgtcta cagctgtctg gttattttct
     3061 gcagtagaga atacctgtga ttttgaaaca ggtattgttg tgtttcttgg taccaatggc
     3121 gtcataacac cgcctaatgt ttcaataccc agtgttaacg gagtaacatc aagcaatacg
     3181 atatctttaa cttcaccggc caatacacct gcttgaacag ctgcaccaac agctacaact
     3241 tcatcagggt taactgattg gttcggatct ttgcctgtga attctttaac caaagcctgt
     3301 acagcaggaa tacgtgaaga accgcctacc aaaacaactt cgtcaatttc gccttttgat
     3361 aaacctgcct cttgcaaagc atcagcaaca ggttttttgc atctttcgag caaatcgtga
     3421 gacaattctt caaattttgc tcttgttaat tgaacatcta agtgtttagg gccgttagca
     3481 tctgctgtga taaacggaag gttgatgttt gtttcaacaa cagaagacaa ttcgcattta
     3541 gctttttcag cagcttcttt taaacgctgc attgcctgtt tatcattttt aaggtcaata
     3601 ccttcagttt ttttgaattc ttcgattaac cagttcatta ttttttcatc aaagtcatca
     3661 ccacccagat gtgtatcacc tgatgtagaa agtacttcgt gtacaccatc gcctatttca
     3721 agaacagaca catcgaatgt accgccgcct aagtcgaata caagaacttt ttccggtttc
     3781 tctttttcaa gaccataagc cagagctgct gctgttggtt cgtttacgat acgtaaaacg
     3841 tctaagccag cgattttacc ggcgtcttta gtagcttgtc tttgagcatc gttaaaataa
     3901 gcaggtactg taattacagc tgatgtaact ttttcaccca ggtatgctga agcatcatct
     3961 gcaagttttc tcaaaatcat tgcagagatt tcttgcggtg tatagtcttt gccattgatg
     4021 ttctttttaa aatcagtacc catttctctt ttgatagaaa tgattgtttt gtcagggttt
     4081 aaaatagcct gacgttttgc taattgtcca acaagttttt cacctgtttt tgaaaatcct
     4141 acgattgacg gtgtagtacg tgagccttct gcgttagcaa taacagtagg ttttccgcct
     4201 tccattactg caactacgga gtttgttgta cctaagtcaa taccaattgt ttttgccata
     4261 gttttatctc tcctttgaat taattaaatt catgtcattt tttctatcta atttataaca
     4321 tcgaattcaa ggaaaaatta aaaaataaac aaaaaattaa tatttcagtc atgcagatac
     4381 aaaaaagaca ttgatatgaa tcaatgtctt tttattatta aatttattat ttaattaaaa
     4441 ctgagctgca atctcaaacg gagtttctga aacgtgagat gctgcgtcaa tttttcctct
     4501 ttttaattct gagaaagaag cttttgttga atggaaagct tttttcaaga attcataagc
     4561 cactttgggg tcacatttgt caccacaggt gaacaggtca actgccgcat aacccagttc
     4621 aggccatgta tgaattgcca gatggctttc agagataata actactccgc ttacaccgtg
     4681 cggactaaac atatgaaaac atttttgtac aatagttgca ccgcactcaa gtgcagcgtc
     4741 aatcataaga ctctcaactt tttgagaatt gttcaaaata ttggggtcac attcaaagaa
     4801 ttcagccaaa acgtgctgtc caagatactt tgcgtttgta tcaacgtgat aaacgtcagg
     4861 ggctgtcata gatttagtca attcatttat ctcctttgct gtttgtactg ttaccagtgt
     4921 aatttttaca attaaaaata tattactata aaaatccaaa aaaattaatt tttgcgactt
     4981 tttgtattat atcttaaaat ttctaaatat tatagattat aattatattt ttgtttatta
     5041 tacaaatagg cgaatcctat tg
//
LOCUS       DABS01000147           28808 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_10039, whole genome shotgun sequence.
ACCESSION   DABS01000147 DABS01000000
VERSION     DABS01000147.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 28808)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 28808)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28808
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(49..798)
                     /gene="bioC"
                     /locus_tag="CPT85_06390"
     CDS             complement(49..798)
                     /gene="bioC"
                     /locus_tag="CPT85_06390"
                     /inference="COORDINATES: protein motif:HMM:TIGR02072"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-[acyl-carrier protein]
                     O-methyltransferase BioC"
                     /protein_id="DAB22310.1"
                     /translation="MINKNLVKFRFQKSINTYDNCAVIQKEMAHLLIEKILANCGNSF
                     DKVFEFGAGTGFLSKNMLNRISFKEYCANDIIEESEFCIKNIINDAKFVAGDIEKINL
                     EEKFDLIVSNAVMQWITDIDELLLKIHRNLTDKGFFAFTTFGEQNFKEIKETTGVSLN
                     YLKTETLKEKCAHKFEITEFEENIQTLCFDSPLDVLKHIKYSGTNGIKTQNWTPSKLK
                     RFDEYYRQSFGINNRVTLTYNPVYVILKTKV"
     gene            complement(802..1455)
                     /locus_tag="CPT85_06395"
     CDS             complement(802..1455)
                     /locus_tag="CPT85_06395"
                     /inference="COORDINATES: protein motif:HMM:PF04301.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22311.1"
                     /translation="MRIHLEKNNSENLILFFCGWGMDENPFSILNNTSDVLYVYDYTT
                     PEFDVFDFSAYKKVDLLAFSYGVYASSIANLSNVKLNSRTAINGTLIPVDDKLGVPIR
                     QFELTEKMDSQTVVKFRERLFGGEKAKEHFEIFENHLPKRNAQSCTQELMGMKRYVPQ
                     FPVPSIKFDKVYIAKYDRCVPTRNQQNFWSNVHNVEIKELETGHFPFYNYSSLEDLL"
     gene            complement(1457..2899)
                     /locus_tag="CPT85_06400"
     CDS             complement(1457..2899)
                     /locus_tag="CPT85_06400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011345218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="DAB22312.1"
                     /translation="MDEVRVRIAPSPSGNLHIGTARTALFNYLFAKKNNGKYVLRIED
                     TDLDRSSQAYIDNIYDSLKALGLNWDEGPDVGGPYGPYQQSDRFDIYPKYAQKLIEAG
                     YAYECFCTQEELDAEKEESIKNKKPHKYSGKCRHLSEEEKEKLRAEGRKPSIRFHVPE
                     GETNFDDLVKGHLHFDNALIGDFVIMKSNGTPTYNFAVVIDDMEMKISHIIRGEDHIS
                     NTAKQIMIYEALGAEIPKFGHLGMILAPDRSKLSKRHGATAVSEFVEKGYLTEALVNF
                     VALLGWSPSDGQEIKTLDEIAADFRIGEVSSSNSIFEYDKLNWMNGQYIKKMDLAKLT
                     QLVKPYLSCYDLSEYTEEQLQKIVEITREPITILSELTNDTKYFFGKDVEVEPEVQEK
                     ILNGEVAKKVLPYVIENELDKWDFDDEEKLHEQLADLRTYFKEQGIKPKETMWAIRAA
                     VTGRTHGADMVATLLLLGKDRVVHRIKKAV"
     gene            3183..3569
                     /locus_tag="CPT85_06405"
     CDS             3183..3569
                     /locus_tag="CPT85_06405"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22313.1"
                     /translation="MTNNIHGIGINTNSVNPYGNQPKGGEAKAEEKEQQAPQAQPQSA
                     QVNPGDVLAYMAQQAVVVNPKVSAQKTYDVSKYVTPEQAQRIAGFVTSFEDQVAEGLL
                     AINKEFGENSGLSEQAKYEIAANMVG"
     gene            3659..3910
                     /locus_tag="CPT85_06410"
     CDS             3659..3910
                     /locus_tag="CPT85_06410"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22314.1"
                     /translation="MYNLIMYILELIAKIFTDKKNKLNTKERQXXKQIMKKNAIMFSF
                     RWIPRAKLLPAQNAGLLLRTTLCVLSPKILFYDYECKDI"
     assembly_gap    3748..3749
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    3989..4059
                     /estimated_length=71
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4060..4275
                     /locus_tag="CPT85_06415"
                     /pseudo
     CDS             4060..4275
                     /locus_tag="CPT85_06415"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     start; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    4239..4256
                     /estimated_length=18
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    4553..4556
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4568..4774)
                     /locus_tag="CPT85_06420"
     CDS             complement(4568..4774)
                     /locus_tag="CPT85_06420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015532766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="DAB22338.1"
                     /translation="MSRDFFIKFGHRVRDLRLRRNMSQENLGLEAGFSGSFVGMIERA
                     EKDISLSKVYKLANALGVSIKELF"
     gene            5021..5638
                     /locus_tag="CPT85_06425"
     CDS             5021..5638
                     /locus_tag="CPT85_06425"
                     /inference="COORDINATES: protein motif:HMM:TIGR04038"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="DAB22315.1"
                     /translation="MNNYVYTLDGKIYINLTNLCTNDCVFCIRAIKDDVVGANLFLDT
                     EVLDINEVKKQLDGFEPDKYSEIIFCGYGEPILKLDALKEIAAYIKEKYPHIKTRINT
                     NGHGNLIYKRNIVPELKGIIDSVSISFNGEDKAVYDAISLPKIENAYEGMKDFIQECV
                     QQGIETTATIVTGYKNYKVNLEDCKSQIQALGAKFRERPWLDNGY"
     gene            5651..6073
                     /locus_tag="CPT85_06430"
     CDS             5651..6073
                     /locus_tag="CPT85_06430"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22316.1"
                     /translation="MIIVNTSDKVKVNFKGKVFLKSKNMEPQKVEVVKRIAKTIKRFI
                     KDEKFDLLFYYKLKDGLDPLHVSAQKGHKQNFFVKCIDIAMPEAEYIDDEHYIEMAKG
                     AVQRYKEFFPKEANTENINLLKQVKNKAKNMFTKQKAG"
     gene            6205..8352
                     /locus_tag="CPT85_06435"
     CDS             6205..8352
                     /locus_tag="CPT85_06435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016474201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family acetyltransferase"
                     /protein_id="DAB22339.1"
                     /translation="MDKIMRPKAIAVVGASTKPKTIGSEIMQRLRDYKFNGKVYPVNP
                     KGGMIEGFQAYTSIAEIPGEVDLAVIVVNAKFVLDTIDQCHAKGIKGLCIITAGFKET
                     GAEGAEAEKQLLAKVKEYGMKCVGPNCLGVLNTNPEISMDATFAESLPVAGDIGFVSQ
                     SGALGGGILNILKDLNLGFAQFISIGNQADVNAETALEYWENEDDVKQILLYMESIQN
                     PANFRKLASRITKKKPILALKSGRSAAGASAASSHTGSLAGADKAADALLKQCGVIRE
                     FSLKNLFANAKAFSNCPIPKGNRVAIVTNSGGPGIMATDAVCESGMQMAKIADKTKEE
                     LRSFLPSAASVKNPIDMIASAPIEHYKQTLETVLKDPEVDMVAVIYLPFLGLKDIDVA
                     KALMEIKAKNPEKPILGVFMTKSEFFTEISNMDVNMPFYMYAEEAAEAMSRLDRQRKW
                     MERPEGKMPVYDVDKAKAEKIIKGAVAEGRAQLTTLESIDVLDAYGIRACKYGLATNE
                     EEVVNLGNSIGYPVVMKMTSKTTSHKTDVGGVRVNIQSEEQLRAEYKDLIAKLTEKGL
                     IDGLEGVIIQEMVKGNREMVCGIATDPQYGPMMMFGLGGVFIETMKDVTFRIAPLTDV
                     DADEMIKSVKAYELLKGARGTKPANIEQIQETLLRLSQMVNDFKFIDELDINPLLISE
                     KTGEGIAVDGRIKVRIEEVKEYFGCGSECTCCK"
     gene            complement(8480..8680)
                     /locus_tag="CPT85_06440"
     CDS             complement(8480..8680)
                     /locus_tag="CPT85_06440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015523645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="DAB22317.1"
                     /translation="MKQDIHPEYKKMKIKCVCGNEIETGSIEENITVEICNKCHPFYT
                     GNQKIMDTEGRVERFKKRYENK"
     gene            8801..9826
                     /gene="proS"
                     /locus_tag="CPT85_06445"
     CDS             8801..9826
                     /gene="proS"
                     /locus_tag="CPT85_06445"
                     /inference="COORDINATES: protein motif:HMM:TIGR00409"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="DAB22318.1"
                     /translation="MKMSRLFVQTLREFPSDAEVISHKLLVRAGYIRKLAQGVYNYMP
                     LMWRVLKKVENIVREEMDAAGAQEMLMPFVQPEELWQESGRWNVYGKELMRLKDRHGR
                     GMCLGPTHEEVITSVAREGIKSYKQLPVNLYQIQSKFRDEVRPRYGLLRGREFIMKDA
                     YSFDSSQEGLEKSYADMAKAYYKIFERCGLETKAVQSDSGAIGGAVSHEYMVLIDDTE
                     NNAGENDVFFCKNKNCGYAANANHAVSVLEPAEVDGTKYFSEFKKVDTPNTTTIEELA
                     EFLKIPQTIILKSMIYVADNKIVMALIRADKTFEETKVMNAVGANEIRSAAPAELEAI
                     FGASKXL"
     assembly_gap    9819..9820
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            9913..10563
                     /locus_tag="CPT85_06450"
     CDS             9913..10563
                     /locus_tag="CPT85_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008426551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22319.1"
                     /translation="MKNFVIGANETDKHFVGVNLSDFAQPIFADIRLVEKGEKCPDCG
                     EPLYVTKGIEVGNIFQLXKYSKAMNAVYLDENGKTQPFIMGCYGIGISRTAAAAVERH
                     HDEHGIKWPVSIAPYHVDIVPVNIQDELQMKVANELYEKLSNAGVEVVLDDRDERAGV
                     KFKDSELIGFPYRITVGKTINDGLVEFKVRETGESETLKPEEAFEKVTEILKPYIK"
     assembly_gap    10096..10097
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            10626..11831
                     /locus_tag="CPT85_06455"
     CDS             10626..11831
                     /locus_tag="CPT85_06455"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22320.1"
                     /translation="MCILCYLKKILPVLLVICFMANASYAAKQKDLPIDKSAKNVDIV
                     YIHGAYETRDAFNESVQNVHDDMIEQIQNDELMHKRLLDNGKKRIGEEPVIFFWADKT
                     EENLKTLDKALSYVKNVGSKIAQFGRETLSHTLHDAIWISKPVNSTPLLNNLNETVKQ
                     ENAKGNQVILYGYSAGSLLASQYLTQKMPIINISDIVKNDDSTYVGRYFAHQSKKHQF
                     KPTCMDALKESKILFYTDNDEFVTNPDISYLKRELPLLDEYTDKYCSPKGAVEGFVVF
                     GTPMTTFDSSASQQGTSTNALFQLAMKYIVENDIFFIVLNYENDFIGMPLAGKPRFED
                     LQKSDFLKDTLPNGGFLYDASGVKCRTSIISSHMAYWSNGKRFAKNIVKSYNDGYKFF
                     YSDKSNQDL"
     assembly_gap    11870..11871
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            11963..12604
                     /locus_tag="CPT85_06460"
     CDS             11963..12604
                     /locus_tag="CPT85_06460"
                     /inference="COORDINATES: protein motif:HMM:PF01865.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22321.1"
                     /translation="MSKFNLLAYILPPEEKVFYTLFEESAQVCHDVANLYREIVTTSM
                     TEDYAINAKRLKHKSNDLLKETLHQLNVTLITPIDREDIQAIASLLNKITKRIVKASL
                     NLKVYRLENFTENMKKQAATLYQATEELKIIIHNFKKSSSIKEMTETNLKMKEIESHG
                     DEIHYHAIDELFSGKYDALTVIKLRDIHKDIENALDACFSVSDAVVNVVLKQS"
     gene            12640..13641
                     /locus_tag="CPT85_06465"
     CDS             12640..13641
                     /locus_tag="CPT85_06465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007362692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="DAB22340.1"
                     /translation="MVLLVLVVVGALVFEYINGFHDAANAIATVVSTKVLTPRQAVVY
                     GATLEFTGALTGTHVAKTIGAGIVDPSTITLHVIFCALCAAIIWNLITWFFGLPSSSS
                     HALIGGLIGAAVVNAGWGCVRFLELVDKVIAPMFMAPVIGFVTGLIVMAILLRIFYKA
                     NPDKVNRRFRRCQIFSAGLMALSHGSNDAQKTMGIITLALLAGGIVKHNAQGSFDIPI
                     YVILACATVMSLGVMSGGWKIIRTMGSKIIKLKPINGFAAETSAASIILAASHFGVPL
                     STTHVISTAIMGVGTTYKAHAVKWGVIGNIVWAWVLTIPICVIISGTIYFLYRTFIL"
     gene            complement(13643..14896)
                     /locus_tag="CPT85_06470"
     CDS             complement(13643..14896)
                     /locus_tag="CPT85_06470"
                     /inference="COORDINATES: protein motif:HMM:PF01546.26"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22322.1"
                     /translation="MAEKTIESLRQENELIDLFCTLAQIPSPSGEEDKVSAKIVEILT
                     NSGIEAKEDHFKNVRAKIEATDPSKKPLLLSAHMDVVGDASDVNIRISQDGKCIETDK
                     TRTLGSDDKVGVACAMQLAMYLKKHPEIKHGGLELVFTKDEEQNMTGIHNVKFDEIDS
                     EYVLVLDADKLGQIQISGASYTNGTLKVETFKGGHSGIDIGDKTRLNAVKLIGELIAK
                     IPQGEYKRDEYGTVTSINIGCVIGGGVEPVIQKIAQKGIKEDSYIEYVADNCLTNIIN
                     TKAMAKYSIRSSEEQNENQLIEDIKKIVEDFNKQYEGLAKAEFIAKSKMKAFEKSGDE
                     TIQNICVKACENIGIKGDVSSFHAGAETHIYAHEKNKHGQTLKPYLIGLADIYNMHSS
                     NEMVDIESFLKGYEFLKETFMIYNA"
     gene            complement(14923..15249)
                     /locus_tag="CPT85_06475"
     CDS             complement(14923..15249)
                     /locus_tag="CPT85_06475"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22323.1"
                     /translation="MPQYKRWYDHDPVLMEVVELLRNYQDELRAQAEIFLAKIEEKVS
                     KETIDKFYEMVKPINGNRWYDKDPVISKTVELLRVVPPEVQKAAAENFIKTLEDIGVD
                     RNAPKS"
     gene            complement(15236..16573)
                     /gene="murA"
                     /locus_tag="CPT85_06480"
     CDS             complement(15236..16573)
                     /gene="murA"
                     /locus_tag="CPT85_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007506123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="DAB22324.1"
                     /translation="MAEKLKIKGAKALHGEVSISGAKNAVLKLMAAAILPKGETVIHN
                     VPQLTDVNIMLRVIEGLGVKTKYDTNAKTVSIDSTDITSITAKYELVSKMRASFIILG
                     ALVTRCKEAIVALPGGCAIGERRVDFHIKGLEALGASIKIENGYVHAKADKLTGTDIY
                     LDIPSVGATENLMLAAILAEGATRIQNAAQEPEIVDLANFLNAMGADISGAGTSEIVI
                     NGVTQNDLHPIEYTTIPDRIEAGTYMAAIIATQGKGIIKNVLPSHLTFYNSKLIKMGA
                     NIKLIEPTVIEVSCNQRLKSVNIVTQPYPGFPTDLQSLAMAMLTTADGVSIITESLYE
                     NRFMQVPELRRMGADIHQERNHALVRGVDSLNGTNLKASDLRAGASLIIAALMADGES
                     EIEALHHIDRGYELLETKFANLGADIVRYNDESDNIIQNASMELSKGNINASI"
     gene            complement(16671..18023)
                     /locus_tag="CPT85_06485"
     CDS             complement(16671..18023)
                     /locus_tag="CPT85_06485"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22325.1"
                     /translation="MIFESMKKLIAIIFVLFTVMMCINTQASAVVRKPPTVLVLTDSG
                     HRNGTNYIICGAASDIIAEDIINELNKTKRIKAPLLGENMAKITQKTLPLYHLTFFKE
                     YKYNYNVDFVNLKRVTANIPADYILMVTSGLDIQSQFLKETWWNKWGISASEPVVPTY
                     RLTTMLTLIDKRTYSIVWQDLYQRDLKAENADIAITQFSPSYAQLAKIKKYSKTMSEY
                     VTMNIDKTVNPWIVPPKEPTAIEMRSRFLNEGTKLHYPAVNEEVVKQNFNEFKTDTKQ
                     KWNTYQRQRMQKKHIENVRRIEKRQEAEKIKQQTQIKKQTKPVKKQEERLFDSIRNNI
                     DDMSNTLPPPTEQEILKERQIEQLNSQPEKTQTTTKTEIKKETDKNIKPAVEVLPAQK
                     KXEEPKLLKPVMNKPVVKQATPKTQEPKEQEEKKHVPYYDWNLKNIYLEKIGKMSHLE
                     "
     assembly_gap    16843..16844
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    18192..18193
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            18273..18665
                     /gene="cdd"
                     /locus_tag="CPT85_06490"
     CDS             18273..18665
                     /gene="cdd"
                     /locus_tag="CPT85_06490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003869245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="DAB22326.1"
                     /translation="MRDNLELLNLAKQACENAYVPYSNFHVGACALYDTGNYYLGCNV
                     ENASYGLSLCAERNAMSNAVVAGEKGKLIKIAIFSKDRTNCMPCGACRQWMSEFKKDN
                     DLQIILESEDSKCAVFTIEELLPYGFEL"
     gene            complement(18672..18887)
                     /locus_tag="CPT85_06495"
     CDS             complement(18672..18887)
                     /locus_tag="CPT85_06495"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22327.1"
                     /translation="MFICKNCKSVDKFELMFAPDYKGAKNYKQEYNKNKDIVITVDGY
                     TFVPDLNFMNNHAVCRYCGQIYMWDYE"
     gene            complement(18887..19855)
                     /locus_tag="CPT85_06500"
                     /pseudo
     CDS             complement(18887..19855)
                     /locus_tag="CPT85_06500"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    19146..19159
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            19915..20574
                     /locus_tag="CPT85_06505"
     CDS             19915..20574
                     /locus_tag="CPT85_06505"
                     /inference="COORDINATES: protein motif:HMM:PF02811.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22328.1"
                     /translation="MDEQNKKITQLLSGFGKADFEKDVDLHMHSCFSDGRLTPQELVA
                     DAQKKNYRYIAIADHNTVEAYKKTDILNTKSPHIITAIEFDCWYKGVLVHILGYGVDI
                     YNEELLKLCAKNKKETESDIVRLLNSRHPKDVIKAIHLAGGAAVLAHPACYWAISLDH
                     FVKSLKALGLDGIEVFYPYRRHRGIIKFHKASTVKKIGEKYNLIMTGGSDSHGEIESI
                     I"
     gene            complement(20577..20807)
                     /locus_tag="CPT85_06510"
     CDS             complement(20577..20807)
                     /locus_tag="CPT85_06510"
                     /inference="COORDINATES: protein motif:HMM:PF12844.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="DAB22329.1"
                     /translation="MTXMTKVEFLKKLGHKIRILRDEKNLSQEKLAEKISIDRGHIGT
                     IENGKADTRIYTVKQIADALEVDITELFNFTI"
     assembly_gap    20799..20800
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(20846..21379)
                     /locus_tag="CPT85_06515"
     CDS             complement(20846..21379)
                     /locus_tag="CPT85_06515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015195238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="DAB22330.1"
                     /translation="MSRDFSSGKDSALINRNIRCKEVRLIGSEGENFGVISTAEAQRM
                     ADEKDLDLVVVSPNQNPPVAKIMNYGKYKYELDKKAKEAKKKQHTVEVKEIKIRYKID
                     VHDYNVRIKNIKKFIAQGDKVKIVIMLRGREMQHTELAFDLANRFIADLENEPINIEK
                     KPSMEGRNLIIILAPSN"
     gene            complement(21568..22098)
                     /gene="fliE"
                     /locus_tag="CPT85_06520"
     CDS             complement(21568..22098)
                     /gene="fliE"
                     /locus_tag="CPT85_06520"
                     /inference="COORDINATES: protein motif:HMM:TIGR00205"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="DAB22331.1"
                     /translation="MQFNQIANNSIQNYNKIFSQQMDSFNISSDKNGMTAFDNVLNSK
                     MQDAQSVPQGPIINTGIQMNVGLENMGISPIDKIEGNYEAQNSTQNPSRGKSNSAVEN
                     LANSFGQAFSNGLNDVNTSQNAAYEAAETFASGGDISVHEVMLASQKANLTMQMALQL
                     RNRLVNAYNEINNVRV"
     gene            complement(22112..22618)
                     /gene="flgC"
                     /locus_tag="CPT85_06525"
     CDS             complement(22112..22618)
                     /gene="flgC"
                     /locus_tag="CPT85_06525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013278598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="DAB22332.1"
                     /translation="MSFSAFDISGSGMYAQKTMMDNIASNIANVNTTRNPDGTPGVYI
                     KKSVSFKAIYADRLGSNAPAFPDGHHEAYYSPTNGTIALKGGISYDDKNISQGVEVAE
                     ITPSNDPYKTIYDPSNPEADADGFVTLPNINVVEEMVNMVSASRAYEANVTTAETTKG
                     MISAALRI"
     gene            complement(22622..23128)
                     /locus_tag="CPT85_06530"
     CDS             complement(22622..23128)
                     /locus_tag="CPT85_06530"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22333.1"
                     /translation="MDLFNIRAIEVTKLAMDGLQKRQTAIASNTANAMTPDYQRKQVA
                     FEDQLREIIAKDDVRRDLRMQNSLAYQKDPYKAGYTTNPNTTNIAQRLPQEQFMYIQQ
                     TRTDTDNYAPEVIKDTRWIDYGNGNNVNVEEEMMTMAKTGSQYNVLATIEGRFMSNLL
                     DVVRGGGS"
     gene            complement(23142..24416)
                     /locus_tag="CPT85_06535"
     CDS             complement(23142..24416)
                     /locus_tag="CPT85_06535"
                     /inference="COORDINATES: protein motif:HMM:PF02518.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22334.1"
                     /translation="MGGANFRQKNLLKDLIYLGQTRPVNKQTIKGLFRFALEPLLEAQ
                     NQKAVVLTRLFDSTELEGVLKRLEFTNAEVYSFDNTTKGENLQRDDIWGETEFLVLLS
                     PRYSACLLWDYSTETVKDTSCLYYLLNSRDVNNVIRIISENSKIDLMRYTQEYTPERR
                     SNELLNKSVHKFINFADSFVEEAALTQAEAGLLGQSDDIAKKYEYISTKAKIISHDIK
                     NHLSIIDLYSKIMEKRLENVANKELQDSMSNAVLSIQKSKQAIGELLTELRTIQGAKL
                     ETHNFSKILQNAIELVQAKAMATSTKFEVSNKFNANVLCDENKLLNIMINLFYNALDS
                     IESAKTQGVIKINTEETADNMLKIYITDNGCGIEQDACEKIFEEGYTSKTTGSGLGLH
                     ISKEAMKEQYGDLNLVNSEKGSTTFVISLPKL"
     gene            complement(24498..25208)
                     /locus_tag="CPT85_06540"
     CDS             complement(24498..25208)
                     /locus_tag="CPT85_06540"
                     /inference="COORDINATES: protein motif:HMM:PF00196.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="DAB22335.1"
                     /translation="MRRGLDFKKKARIIIVDDNYDHLSGIKELIEIESDFDVVATATS
                     ASVAISLIKKYRPEIVLMDINMPEKDGLTAIAEIEKLDLGVRIIALTGYDDPDLIFRA
                     MKIGAKGYILKTMASAQLIYAIDEVAAGKIYLPAALSSRFFEYFQQSFKEETQVVADE
                     ENLLNYLTQREEEVLDLLTQGITYKGVAQKLFISETTVKTHVNNIFQKLQVNDRTQAV
                     LYALNNGFLNRRKVKIAI"
     gene            25550..25895
                     /gene="rnpB"
                     /locus_tag="CPT85_06545"
     ncRNA           25550..25895
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="CPT85_06545"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            26033..27103
                     /locus_tag="CPT85_06550"
                     /pseudo
     CDS             26033..27103
                     /locus_tag="CPT85_06550"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    26867..26908
                     /estimated_length=42
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            27103..27855
                     /locus_tag="CPT85_06555"
     CDS             27103..27855
                     /locus_tag="CPT85_06555"
                     /inference="COORDINATES: protein motif:HMM:PF01656.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22336.1"
                     /translation="MTLAIAITGKSGSGKTTITKNFVKVLKETYPDKSILLFDNDLST
                     ELAHSYGMDVRNTIYGIRSGKHEYKTGIPSRMTKQEYIEWALEDILVEVEENVDLIVS
                     WLVPSKDCRCPVTGLIADAVAKLINGYDIVVFDCEFDLKYLHQLVDIPMDVTLIVANP
                     TEESIFLAQRIEEFSAKYAAGGQMALVLNNVDNEQYNKIQDYLSKYSLEVLGVIPKDK
                     ALLEHSIDKNSKIVEDAIKALYFRLNLPQVRN"
     gene            27862..28710
                     /locus_tag="CPT85_06560"
     CDS             27862..28710
                     /locus_tag="CPT85_06560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003332485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="DAB22337.1"
                     /translation="MMAKLIEGKVVAQKILENLSDEILFLDKKPSLAVIIVGDDPASK
                     IYVNLKKKKAQELGITSQVIEMNASVTEQELLDKIDELNNNKEVNAILVQLPLPAHIN
                     TQKVIEKISPIKDVDCFHPYNMGKIATGLKPYVYPCTPKGIIRLLEYYDIEIEGKNAV
                     VIGRSNIVGRPLGQMLLNSNATVTFCHSKTKDLAKITKTADILICAAGRLNLITRDMV
                     KEGAVVIDVGMNRKEDGKLAGDVDFFNVETVASYITPVPGGVGPMTICSLMQNTFDLY
                     KIQNEV"
BASE COUNT         8325 a         5201 c         5774 g         9345 t
ORIGIN      
        1 agaacaaaaa actgactgta aagctcaacc cgtatgacgc aatgtggctt aaactttagt
       61 ttttaaaatt acataaacag ggttgtacgt cagtgtgacc ctgttattta ttccaaagct
      121 ttgtctgtaa tattcatcaa acctttttag ttttgagggg gtccagtttt gtgtttttat
      181 accgtttgtg cccgagtatt ttatgtgttt caaaacatct aatggtgagt caaagcagag
      241 tgtttgaatg ttttcttcaa actctgttat ttcaaatttg tgagcacatt tttctttgag
      301 ggtttcggtt tttaaatagt ttagagaaac acctgttgtt tcttttatct ctttaaaatt
      361 ttgctcccca aatgttgtaa acgcaaaaaa tcctttgtcc gtaaggtttc tgtgtatttt
      421 taaaagcagc tcatcaatgt ctgttatcca ctgcattact gcgtttgata ctataaggtc
      481 gaatttttct tccagattga ttttttcgat gtcgccggct acgaattttg cgtcattaat
      541 aatgtttttt atacaaaatt ccgattcttc tatgatatcg tttgcgcagt actctttaaa
      601 agatatacgg ttgagcatat tttttgacaa aaaccctgtg cctgctccga attcaaacac
      661 tttgtcaaaa gagtttccgc agtttgcgag tattttttca ataagcaaat gcgccatctc
      721 tttttgtata acagcgcagt tgtcataggt gtttatgctt ttttgaaatc tgaattttac
      781 taaatttttg tttatcattg tctataataa gtcttctaac gaactataat tataaaacgg
      841 gaaatgccct gtctcaagct cttttatttc aacgttgtgt acattgctcc aaaaattctg
      901 ctggttgcga gtcggcacgc atctgtcgta ttttgcaata taaaccttat caaattttat
      961 agacggaaca ggaaattgcg gcacatatct tttcatgccc ataagctctt gcgtgcagct
     1021 ttgtgcattt ctttttggca gatggttttc aaagatttca aaatgctctt ttgctttttc
     1081 gccgccaaat aaacgttcac ggaatttcac taccgtttga gagtccattt tttctgtcag
     1141 ctcaaactgt cggattggca cgccaagttt gtcgtctacc ggtataagcg ttccgtttat
     1201 tgctgttcgc gagttcaatt ttacattgct taggtttgca atactagacg cataaacacc
     1261 gtaagaaaat gccagcaggt caactttttt gtatgctgaa aaatcaaaaa cgtcaaactc
     1321 cggtgttgtg tagtcgtaaa cgtacaaaac atcggacgta ttattaagaa tggagaacgg
     1381 attttcatcc attccccatc cgcaaaagaa taaaattaag ttttcgctgt tgtttttttc
     1441 taaatgtata cgcattttat acagcttttt ttattctgtg tacaactctg tctttgccaa
     1501 gcaaaagcag tgttgcaacc atgtctgcac cgtgggttct gcctgtaact gcagctctta
     1561 ttgcccacat tgtttctttg ggttttatgc cctgctcttt aaagtatgtt ctcaaatcag
     1621 cgagctgctc gtggagcttt tcttcgtcat caaaatccca tttgtccagc tcattttcaa
     1681 ttacataagg aagtactttt ttggcaactt cgccgttaag aattttttcc tgtacttcag
     1741 gttctacttc cacatctttg ccaaagaagt attttgtgtc atttgtcaat tctgaaagaa
     1801 ttgtaattgg ttctcttgta atttcaacga ttttttggag ttgttcttct gtatactcgc
     1861 tcaaatcgta gcaggaaagg tatggtttaa cgagctgcgt caattttgcc aaatccattt
     1921 tcttgatgta ttgtccgttc atccagttga gcttgtcgta ttcaaaaata gagttggatg
     1981 aagaaacttc gccgattcta aaatctgctg cgatttcatc aagggttttg atttcctgcc
     2041 cgtcagaagg tgaccagcct aacaaagcta caaagtttac gagtgcttct gttaagtaac
     2101 ctttttcaac aaattcggaa accgctgttg cgccgtgtct ttttgagagt ttgcttctat
     2161 ccggtgccag aatcataccg aggtggccga atttaggaat ttctgcaccc agtgcttcgt
     2221 aaatcatgat ttgttttgca gtgtttgaga tgtggtcttc gccgcggatg atgtgagaaa
     2281 tcttcatttc catatcatct attacaaccg caaagttgta tgtgggtgtg ccgtttgatt
     2341 tcatgattac aaaatcgccg attaatgcgt tgtcaaagtg aaggtggcct ttaacaaggt
     2401 cgtcaaagtt tgtttcacct tcgggtacat ggaatctgat tgaaggtttt ctgccttcgg
     2461 ctcttaattt ttctttttct tcttctgaca aatgtctgca tttgccggaa tatttgtgag
     2521 gttttttatt tttgattgat tcttcttttt ctgcatcgag ctcttcttgt gtgcagaagc
     2581 attcgtatgc atagcctgct tctatcagct tttgagcgta tttggggtag atatcaaatc
     2641 tgtctgactg ctgataaggg ccgtaaggac cgccaacatc agggccttcg tcccagttga
     2701 gaccgagagc ttttaggctg tcataaatat tatcaatata tgcctggctt gagcggtcaa
     2761 ggtctgtgtc ttcaattctt aaaacgtatt tgccgttatt tttctttgca aacaaatagt
     2821 tgaacagcgc tgttcttgct gtacctatgt gtaaattacc gctcggggaa ggggcaattc
     2881 ttactctaac ttcgtccatt actttctcca atctttgtta ttctgtatat aattttacca
     2941 ccaacaaaat gtccgaaaaa ttttcgttat aaggagtaaa cgacgttaac gaaaattttg
     3001 agtgacaatt gaaaaggtga gcagtggcgg ctcgaaagct cgaggcggca gctgcgacac
     3061 tagattagaa tgtaacgata tgtaaataaa tcgtaaaaag ttaagacttc tccctaaagt
     3121 ttattaaact ttaagccgat aaccatgatg tggaaacaaa aaattaaaca ggagaagata
     3181 agatgacaaa caacattcat ggaattggta ttaacacaaa ttcagtaaat ccttatggca
     3241 atcagccaaa aggcggcgaa gctaaagccg aagaaaaaga acaacaggct cctcaagccc
     3301 aacctcaatc agcacaggta aacccgggcg atgtgcttgc ttatatggca caacaggcgg
     3361 ttgttgtaaa ccccaaagtt tcagcacaaa aaacttatga cgtttcaaaa tatgttacac
     3421 ccgaacaggc acaacgtatt gcaggctttg taacaagctt tgaagaccag gtggcagaag
     3481 gcttgcttgc aatcaacaaa gagttcggtg aaaattcagg cctttctgaa caggcaaaat
     3541 atgaaattgc agccaacatg gtaggctagc attaaagatt aaacccggta aatacgcaaa
     3601 tttcttcact tctccgatat ttaaaaagcc tttagtctgg tgactaaggg ctttattatt
     3661 gtataattta attatgtata tacttgagct tattgcaaaa atctttactg ataaaaagaa
     3721 caaattaaac acaaaggaac ggcaaaannc gaaacagatt atgaagaaaa atgcaatcat
     3781 gttttccttc cgctggattc cacgggcgaa actcttgcct gcacaaaatg cgggcttgtt
     3841 gttaagaacg accctttgcg tgttaagccc aaaaatcctt ttttatgatt acgaatgtaa
     3901 agatatttga cttttgtgtt taaatcaaac ggactttaaa atataatact tataactaat
     3961 atatatttca taagttcaag aggaagatnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     4021 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnna cagacaacaa aggtattgca
     4081 aagctgtgcg cacaggtctc tatgatgcct aaaaaagacg aacacggccg tacttatttt
     4141 tcaaaagatg atttggaaat actaagacgt gtaaaaaata aaaacgatga acaacaggct
     4201 aaacagccaa aaagaatggc acaaaaatct tatgccacnn nnnnnnnnnn nnnnnnttgc
     4261 acagcctccg gttaatcgtc ctgttaaggc gccggcagtt gcacagagcc ctgctgttga
     4321 caaaatttgt acttctttaa caattcttga agacaatctg acagacaaat ttagtgaaat
     4381 gcttgataaa aaattggacg aaaagctcga cggaatggac gaagtggttg ttgagcttgt
     4441 cagatgcaaa acagaaaatg aaacactccg ctacaaaatg aacgaattga acaaagaagt
     4501 ttataacctc aaaaatgaat tgagcagata taaagcgctc ggttttggtt ttnnnntctt
     4561 ctttaattta aaacagctct tttatgctta cgccaagagc attggcgagt ttgtagactt
     4621 tagaaagcga aatgtctttt tcggcgcgct caatcattcc gacaaacgag ccggaaaaac
     4681 ctgcttcgag tcccagattt tcctgcgaca tattacgtcg taatcgcaga tctctaacgc
     4741 gatggccgaa ttttataaag aagtccctag acatattaac attgtggctt cgaaactggt
     4801 agttgtccac aactgacagt tgtggtataa taacacgcga agaacctaac ataccgaaaa
     4861 acctggctgt tttcggttac aattgaccgg ttgccatcac gggcacggtt taatgattta
     4921 tacgttgtat aagttcatcc tgacctgttt tttataaaca ggtctgtttt tattaaaaaa
     4981 taatgcttga ttgtgtttta agttgtgcga aaataattgt atgaataatt atgtttatac
     5041 actggatggt aagatttata ttaatttaac aaacctttgc acaaatgatt gtgtgttttg
     5101 tatccgcgca ataaaagatg atgttgtcgg tgcaaatctg tttttggata cagaggtgct
     5161 tgatataaac gaggtaaaaa aacagcttga tggttttgaa cctgacaaat acagcgagat
     5221 tattttttgc gggtatggtg agcctatctt aaaactcgat gcattaaaag aaattgcagc
     5281 ttatatcaaa gaaaaatatc ctcatataaa aaccagaatc aatacaaacg gacatggcaa
     5341 tcttatttac aaacgcaata ttgtaccgga gcttaaaggt attatagaca gcgtttcaat
     5401 cagttttaac ggagaggaca aggctgttta tgatgcaatt tctttgccaa aaatagaaaa
     5461 tgcttacgaa ggcatgaaag actttataca agaatgtgta cagcagggca ttgaaacaac
     5521 cgcaactatt gtgacaggat ataaaaacta taaagtaaac cttgaggatt gcaaatcgca
     5581 aatacaagcg ctcggggcaa agtttagaga gcggccatgg ctcgataacg gatattagaa
     5641 gaagaaaacc atgataatag taaacactag cgacaaagta aaagtaaatt ttaagggaaa
     5701 agttttttta aaatcaaaaa acatggagcc ccaaaaggtt gaggttgtaa agagaatagc
     5761 aaaaacaatc aaacggttta taaaagacga aaagtttgat ttgctttttt attacaaact
     5821 aaaagacggg cttgaccctt tgcatgtttc ggctcaaaaa gggcataagc aaaacttttt
     5881 tgttaaatgt attgatattg caatgcccga agctgaatat attgatgacg aacactacat
     5941 tgaaatggca aaaggtgctg ttcaaagata caaagagttt tttccaaaag aagctaacac
     6001 tgaaaatata aacctgctta aacaggtgaa aaacaaagcg aaaaatatgt ttacgaaaca
     6061 aaaagccggt taaattaacc cggctttttt aatattaatt tatgctattg gtttgaataa
     6121 atattttgtt cgtaagataa ttatagtgat ggattatagc aatcgagtac caaaaagaaa
     6181 ggtgaaaaca tgttaaaaga acaaatggac aaaatcatgc gtccgaaagc tattgctgtt
     6241 gtcggtgcat caacaaaacc aaaaactatc ggttctgaaa tcatgcagcg tcttagagat
     6301 tacaaattta acggaaaagt ataccccgtt aacccaaaag gcggcatgat tgaaggattt
     6361 caggcttata catcaattgc ggaaatcccc ggtgaagtgg atctcgcagt tatcgttgtt
     6421 aatgcaaaat tcgttcttga tacaattgac cagtgccatg caaaaggcat aaaaggtttg
     6481 tgtatcataa ctgccggatt taaagaaaca ggtgctgaag gcgctgaagc agaaaaacaa
     6541 cttcttgcaa aagtaaaaga atacggcatg aaatgcgttg gccctaactg cctcggcgtt
     6601 ttgaatacaa accccgaaat cagcatggat gcaacttttg cagagtctct gcctgttgcc
     6661 ggtgatatcg gttttgtttc tcaatcaggc gcattaggcg gcggtatctt aaatatttta
     6721 aaagacctta atttaggttt tgcgcagttt atctctatcg gcaaccaggc tgatgttaat
     6781 gctgaaactg ctcttgaata ctgggaaaat gaagatgatg ttaaacaaat tttgttgtac
     6841 atggaatcaa ttcaaaaccc tgctaacttt agaaaattag cttcaagaat tacaaagaaa
     6901 aaacctattc ttgctttaaa atcaggccgt tcagctgcag gtgcttctgc tgcttcttct
     6961 cacacaggtt ctttagccgg tgctgacaaa gctgctgatg ctctgctcaa acaatgcggt
     7021 gtaataagag aattttcttt gaaaaatctt tttgctaacg caaaagcatt ttctaactgc
     7081 ccgattccaa aaggcaaccg tgtagctatt gttactaact caggcggccc cggaattatg
     7141 gcaacagacg ctgtttgcga atcaggtatg caaatggcta aaatcgctga caaaacaaaa
     7201 gaagaattaa gaagcttctt accttctgct gcaagtgtta aaaaccctat cgatatgatt
     7261 gcatctgctc ctatcgaaca ctacaaacaa acacttgaaa ctgttttgaa agaccctgaa
     7321 gtagacatgg ttgcagtaat ttatctgcct ttcttaggtt tgaaagatat cgatgttgct
     7381 aaagcattga tggaaatcaa agctaaaaac cctgaaaaac caatcctggg tgtattcatg
     7441 acaaagagcg aattctttac agaaatttct aacatggatg taaatatgcc gttctatatg
     7501 tacgctgaag aagctgcaga agctatgtca agacttgaca gacaaagaaa atggatggaa
     7561 agacctgaag gcaaaatgcc tgtttacgac gtagacaaag ctaaagctga aaaaatcatc
     7621 aaaggcgctg ttgctgaagg acgtgctcaa ttgacaacat tggaatcaat cgatgtatta
     7681 gacgcatacg gcatcagagc ttgcaaatac ggtcttgcaa ctaacgaaga agaagttgtc
     7741 aacctcggta actcaatcgg ctaccctgtt gttatgaaaa tgacttcaaa aacaacttct
     7801 cacaaaacag acgttggcgg cgtaagagta aacatccagt cagaagaaca attaagagct
     7861 gaatacaaag acttaattgc taaattgact gaaaaaggcc tcattgacgg tcttgaaggt
     7921 gtaatcattc aagaaatggt taaaggcaac cgcgaaatgg tttgcggtat tgctacagac
     7981 ccgcaatacg gtccgatgat gatgttcggc ttaggcggtg tgttcatcga aactatgaaa
     8041 gacgtaactt tcagaattgc tcctttaaca gatgttgatg ctgatgagat gattaaatca
     8101 gtaaaagcat acgaattgtt aaaaggcgca agaggcacaa aacctgctaa tattgaacaa
     8161 attcaagaaa ctctcttgag attgtctcaa atggttaatg actttaaatt cattgatgaa
     8221 ttggatatca acccattgct catctctgaa aaaacaggcg aaggcattgc tgttgacgga
     8281 cgtatcaagg ttcgtattga agaagttaaa gaatactttg gctgcggaag cgaatgcact
     8341 tgctgcaagt agttaatcta attttttaga ttaaaagaac agacctctga atattttggg
     8401 ggtctgtttt tttacacaaa ctgcaataaa aaaagagctc tttttagagc tcttttgaaa
     8461 tcttttaaga taactaaaac tatttgtttt cgtatctttt tttgaatctt tcaactctac
     8521 cttcagtgtc cataattttt tggttacctg tgtagaacgg atggcatttg ttgcagattt
     8581 caacagtgat gttttcttca atagaacctg tttctatttc gtttccgcaa acgcatttga
     8641 ttttcatttt tttatattcc ggatgaatat cttgtttcat tgttttcatt cccttctgta
     8701 aaagttattt agtactacaa ttttagactg ctgaaaaatt attatcaagt ttttttgtgc
     8761 taacattaaa gaaaatgtaa tataagagga tttgcaaacc atgaaaatgt cgagactttt
     8821 tgtacaaaca ctcagagaat tcccctccga tgccgaagtt atcagccata agctgcttgt
     8881 aagagcaggc tatataagaa aactggcaca gggcgtttat aattatatgc ctttgatgtg
     8941 gagagttttg aaaaaagtcg agaatattgt aagagaagaa atggacgcag caggcgctca
     9001 ggaaatgctt atgccttttg ttcagcccga ggaactctgg caggaatccg gcagatggaa
     9061 cgtttacggc aaagagctga tgaggctgaa agaccgccac ggccgcggta tgtgccttgg
     9121 accgacacac gaagaggtta tcacatcagt tgcccgtgaa ggcataaaat cttataaaca
     9181 attgcctgta aatctctatc aaatccaatc aaaattccgt gacgaagtcc gccccagata
     9241 cggtctttta agaggacgtg aattcattat gaaagatgct tacagttttg attcatctca
     9301 agaagggctg gaaaaatcct atgctgatat ggcgaaagct tattacaaaa tttttgaacg
     9361 ctgcggactc gaaacaaaag ctgttcaatc agattctgga gctataggcg gtgctgtttc
     9421 acatgaatat atggttttaa ttgacgatac ggaaaacaat gccggtgaaa acgatgtttt
     9481 cttctgcaaa aataaaaact gcggatacgc tgcaaacgca aaccatgctg tttcagtact
     9541 tgaacctgcc gaagttgacg gaacaaaata tttcagcgaa ttcaaaaaag ttgatacacc
     9601 aaatactaca accattgaag agctggcaga gtttttgaaa atccctcaaa caataatttt
     9661 aaaatccatg atttatgttg ctgacaacaa aattgttatg gcattaatca gagcagacaa
     9721 aacttttgaa gaaacaaagg tcatgaacgc agttggcgct aacgaaatca gaagtgctgc
     9781 accggctgaa cttgaagcaa tctttggtgc gagcaaagnn ttgtaggacc taaagatatt
     9841 gaacaggtta aaatccccga agattacgaa ggcgacaaaa tcacagtcgt tgctgacctt
     9901 acagccaaag aaatgaaaaa ctttgtaatc ggagccaacg aaacagacaa acactttgtg
     9961 ggtgtaaacc tttcagactt tgcacaacct atttttgcag atatcagact cgttgaaaag
    10021 ggcgaaaaat gccccgattg cggagagcct ttgtatgtta caaaaggtat tgaggtcggt
    10081 aacatttttc agctcnnaaa atattctaaa gcaatgaatg ctgtttatct tgatgaaaac
    10141 ggaaaaacac aaccgtttat catgggctgt tacggtatcg gtatttcaag aaccgctgca
    10201 gcagcagttg agcgtcacca tgatgaacac ggtatcaaat ggcctgtttc aatagcgcca
    10261 taccatgttg atattgtgcc tgttaatatt caagacgaat tgcagatgaa agttgcaaat
    10321 gaactttacg aaaagctctc taatgccggt gttgaagttg ttttagacga cagagacgag
    10381 cgtgccggtg tcaagtttaa agactctgaa cttatcggtt tcccttacag aatcacagta
    10441 ggcaaaacaa tcaacgatgg gcttgttgaa ttcaaagtaa gagaaacagg cgagtctgaa
    10501 actttgaagc ctgaagaagc ttttgaaaaa gttacagaaa ttttgaagcc gtatataaaa
    10561 tagctatttt ttgtaaaatg agataaaatc atataagttg tctgatttgt aaatggagag
    10621 tgcttatgtg tattttgtgt tatttaaaaa aaatattacc ggttttgctc gtaatttgtt
    10681 ttatggcaaa tgcttcttat gctgctaaac aaaaggactt gccaatagat aaatctgcca
    10741 aaaatgtgga tattgtttat attcacggtg cgtacgaaac cagagatgct ttcaatgaat
    10801 ctgttcaaaa tgtgcatgat gatatgatag agcaaattca aaatgatgag ttgatgcata
    10861 aaagacttct ggacaacggc aaaaaaagga taggtgaaga gcctgttata ttcttttggg
    10921 cggataagac cgaagaaaat ttgaagacac tggacaaagc actttcttat gtaaaaaatg
    10981 tcgggtcaaa gattgctcag tttggaaggg agactctttc tcacactttg catgatgcaa
    11041 tttggattag caaacccgtt aactccacac ctttgcttaa caatttaaac gaaactgtta
    11101 aacaggaaaa tgcaaaaggc aatcaggtaa ttttatacgg atatagcgcc ggcagtcttc
    11161 ttgcctcgca gtatcttacg caaaagatgc ctatcatcaa tatatccgat attgttaaaa
    11221 acgatgattc tacctatgtg ggacgatatt ttgcgcatca atccaaaaaa catcagttta
    11281 aacccacctg tatggatgcg ttaaaagaaa gcaaaatact tttttataca gacaacgatg
    11341 aatttgtcac aaatcctgat atttcttatc taaaacgcga gctgcctttg cttgatgaat
    11401 atacagacaa atattgttct cctaaaggag ctgtagaagg ttttgttgtt tttggcacac
    11461 cgatgacaac gtttgattcc tcggcttctc aacagggcac gtctacaaat gcgctgtttc
    11521 agcttgcaat gaaatatatt gttgaaaatg atattttctt tattgtattg aattatgaaa
    11581 acgattttat tggcatgcca ttagccggaa aacccaggtt tgaagatttg caaaagtctg
    11641 atttccttaa agatactttg ccaaacggcg ggtttttgta tgatgcttcc ggggtaaaat
    11701 gcagaacaag cattatctct tcgcacatgg catactggtc taacggtaaa aggtttgcaa
    11761 aaaatattgt aaaaagctat aacgacgggt ataaattctt ttattcggat aaatccaatc
    11821 aagatttata attgtaatat tttctttact ttaatatctt gaaacgccan natggaaaat
    11881 acttttttat ggtagagtgg ttgtgtgtgc cttttgggtg gatacaaaat cgcaaagaca
    11941 ctgtttagtg aaaggaatta agatgagtaa attcaatttg ttagcataca ttctgcctcc
    12001 ggaggaaaaa gttttttata cactgtttga agaaagcgcg caagtttgtc acgatgttgc
    12061 taatttgtac agagagattg ttacaacatc aatgacagag gattatgcaa taaacgcaaa
    12121 aagacttaag cacaaaagca atgacctgct aaaagaaaca ctccaccagt tgaatgttac
    12181 tcttattaca cctattgacc gtgaagatat tcaggcaatt gcatctttgc tcaacaaaat
    12241 cacaaaaaga attgttaaag cctcgctcaa cctcaaagtt tatcgtctgg aaaactttac
    12301 ggaaaatatg aaaaaacagg ctgcaacatt gtatcaggca acagaagagt tgaaaatcat
    12361 tatccacaac tttaaaaaat caagctcgat taaagaaatg acagaaacta acctgaaaat
    12421 gaaagagatt gaatctcacg gggatgaaat ccactatcat gcgattgacg agcttttttc
    12481 gggtaaatat gatgcgttga ccgttatcaa attgagagat atccacaaag atattgaaaa
    12541 tgcgctcgat gcgtgtttct cggtttcgga tgcggttgtt aatgttgttt taaaacagag
    12601 ctaatatcta aggaagaaaa gatttatatg acagtttcta tagtattgtt ggtattggta
    12661 gtagtcggtg cgctggtgtt tgaatacatt aacggttttc atgatgcagc aaacgcgata
    12721 gctacagttg tttccacaaa agttttgaca ccccgtcagg cagttgttta cggtgcaact
    12781 ctcgagttta ccggtgcgct gacaggtaca cacgttgcaa aaaccattgg agcagggatt
    12841 gttgaccctt ctacaattac tcttcatgtt atattctgtg cgctttgtgc agctattata
    12901 tggaacctta tcacctggtt tttcggttta ccgtcaagct catctcatgc attgataggc
    12961 gggcttattg gtgctgctgt tgtaaatgcg ggatggggct gcgtaaggtt tttggaactt
    13021 gtagataaag ttattgcacc gatgtttatg gcgcctgtta tagggtttgt tacaggtctt
    13081 attgtgatgg caattctgct tcgtattttt tacaaggcca accctgacaa agttaacaga
    13141 agattccgcc gatgtcagat attttcggca ggtcttatgg cattgagcca cgggtctaac
    13201 gacgcacaaa aaacaatggg gattattact ctggctttgc ttgcaggcgg tattgtaaaa
    13261 cacaatgctc aaggcagttt tgatattccg atatacgtta ttcttgcctg tgcgacagta
    13321 atgagtttgg gcgttatgtc aggcggatgg aagattatcc gtacaatggg aagcaagatt
    13381 atcaagctca agcccataaa cggttttgct gcagagacgt cagctgcttc tatcattctt
    13441 gcagcttcgc actttggtgt acctttgagc acaacacacg ttatttctac agcaattatg
    13501 ggtgttggta caacctacaa agctcatgcc gttaagtggg gtgtgatagg caacattgta
    13561 tgggcgtggg ttcttacaat tcccatctgt gttataattt ccggtacaat ctacttcctg
    13621 tacagaacat ttattttata atctatgcgt tataaatcat aaatgtttct ttaaggaatt
    13681 catagccttt taagaagctt tctatatcta ccatttcgtt ggacgagtgc atgttgtaaa
    13741 tatctgcaag gccgataaga tacggcttta gagtctgtcc gtgtttgttt ttttcgtgcg
    13801 cgtagatatg ggtctcggct ccggcatgga aagatgatac atcgcctttt atgccaatgt
    13861 tttcacaggc tttgacgcag atattctgga ttgtttcgtc acctgatttt tcaaacgctt
    13921 tcatttttga tttcgcaatg aattctgctt ttgcaagacc ttcgtattgt ttgttaaagt
    13981 cttctactat ttttttgata tcttcaataa gctgattttc attttgctct tcagagcttc
    14041 ttattgaata tttggccatt gcttttgtgt tgattatgtt tgtaaggcaa ttgtcagcaa
    14101 catattcaat gtagctgtct tcttttattc ctttttgtgc aatcttttgg ataacgggtt
    14161 ctacgccacc gcctattacg cagcctatgt taatggaggt taccgttccg tattcgtctc
    14221 ttttgtattc gccttgcggg atttttgcaa tcagctcgcc tattagtttt actgcgttta
    14281 accttgtttt gtctccgata tcaataccgg agtggccgcc tttaaaggtt tctactttca
    14341 atgtgccgtt tgtgtagctg gcgccggaaa tttgtatctg gcccagtttg tcagcgtcaa
    14401 ggacaagcac atactcggaa tctatttcat caaatttaac gttgtgtatg cctgtcatgt
    14461 tttgttcttc atcttttgta aaaacaagct caagcccgcc gtgtttgatt tcagggtgtt
    14521 ttttcaaata cattgcaagc tgcattgcac aagcgacacc gactttgtcg tcagagccaa
    14581 gagtccttgt tttgtcggtt tcaatacatt tgccgtcttg tgaaattctt atatttacat
    14641 cggacgcatc gcccacaaca tccatgtgag cggagagaag caatggtttt ttagacgggt
    14701 ctgttgcttc tatttttgct cttacgtttt tgaagtggtc ttctttggct tcaatgccgg
    14761 agtttgtcag gatttctaca attttggcag acactttgtc ctcttcgcct gaaggggacg
    14821 ggatttgtgc taatgtacag aacaggtcaa taagctcgtt ttcctgtctt aacgattcaa
    14881 tagttttttc ggccataata aactccttag tatataaaat tattaagatt taggggcgtt
    14941 tctgtctacg ccgatatctt ctaatgtttt aataaagttt tccgcagctg ctttttgtac
    15001 ttcggggggc acaactctta aaagttctac cgtttttgaa ataacaggat ctttgtcgta
    15061 ccagcggttg ccgtttatag gtttaaccat ttcataaaat ttgtctatag tttctttaga
    15121 tactttttct tctattttcg cgagaaaaat ctcagcctgc gctcttaatt catcctgata
    15181 attgcgcaaa agctcaacaa cttccattaa taccggatca tgatcgtacc atcttttata
    15241 ttgaggcatt tatgttccct ttgctaagtt ccatcgaagc gttttgaatt atattatcgc
    15301 tttcatcatt gtatcttact atatctgcac ccaaattggc aaattttgtt tctaaaagtt
    15361 catagcctct gtcgatgtgg tgtagagctt ctatttcgct ttctccgtca gccataaggg
    15421 cagcaatgat taaagaagcg cctgctctaa ggtcgctggc tttgaggttt gtaccgttta
    15481 atgaatctac ccctcttaca agtgcgtggt ttctttcttg atgaatgtcc gcgcccattc
    15541 tgcgaagctc aggcacctgc ataaacctgt tttcgtataa gctttctgtg ataatgctca
    15601 caccgtcagc tgttgttaac attgccattg caagtgactg caagtctgtc gggaaccccg
    15661 gatatggctg agttacgatg ttaacggatt ttaaacgctg attgcagctt acttctatca
    15721 ctgtgggttc aattagtttt atgtttgcac ccattttgat taattttgag ttgtaaaaag
    15781 tcaaatgtga aggcaataca tttttgataa tccctttgcc ctgtgtggca atgatagcag
    15841 ccatgtatgt tcctgcttcg attctgtcag ggattgttgt gtattcaata gggtgaaggt
    15901 cgttttgtgt aacaccgtta atgacaattt ctgacgtgcc tgcgcctgaa atatctgcac
    15961 ccattgcgtt taagaagttt gcaaggtcaa caatctcggg ttcttgagct gcgttttgga
    16021 ttcttgttgc gccttcggcc aaaattgctg ccagcataag gttttctgta gcaccgacag
    16081 acgggatatc taaatagatg tctgtgccgg tgagcttgtc ggctttggcg tgtacatagc
    16141 cgttttctat tttgatggaa gcacctagag cttcaaggcc tttgatgtgg aaatccactc
    16201 ttctttcacc tattgcacag cctccgggga gtgcaactat ggcttcttta catcttgtga
    16261 ccagtgcgcc aaggataata aaagaggctc tcattttgct gacgagttcg tatttagcag
    16321 tgatgcttgt tatatctgta gaatctatag atactgtttt tgcatttgtg tcatattttg
    16381 ttttaacccc gaggccttct attacgcgaa gcattatgtt tacgtccgtg agctgcggaa
    16441 cgttgtggat aacggtttct ccttttggca ggatggctgc tgccatcaat ttcagtacgg
    16501 cattttttgc tccgcttatg gagacttctc cgtgtaatgc ctttgcgcct tttattttaa
    16561 gtttctctgc caaaattccc tccggagtta tactattcta ctatcataat ataaccaaca
    16621 taatttgtcg tacataattt aattaatgta gtttaaattt attaatgaaa tcattccaga
    16681 tgagacattt tgcctatttt ttccagatat atgtttttta gattccaatc ataataaggc
    16741 acatgtttct tttcttcttg ctcttttggt tcctgtgttt ttggtgttgc ttgttttaca
    16801 acaggtttgt tcatcacagg ttttagaagt tttggttctt ctnntttttt ctgtgcgggc
    16861 agcacttcca ctgccggttt tatatttttg tcagtttcct ttttaatttc tgtttttgtc
    16921 gtagtctgag ttttttccgg ttgagaattt agctgttcta tttgtctttc ttttagaatt
    16981 tcctgttctg tcggaggcgg cagtgtatta gacatgtcgt ctatgttgtt tcttattgag
    17041 tcaaacaatc tttcttcctg tttctttaca ggctttgttt gtttttttat ctgtgtctgt
    17101 tgtttgattt tttcagcttc ctgccttttt tcaatgcgtc ttacgttttc gatgtgtttt
    17161 ttctgcattc tttgacgctg atatgtgttc catttttgtt ttgtgtctgt tttaaattcg
    17221 ttaaagtttt gtttaacaac ttcttcatta acagcagggt agtgcagttt tgtgccttcg
    17281 tttaagaatc tgcttctcat ttctattgca gttggttctt tgggcggtac aatccagggg
    17341 ttaactgttt tgtcaatgtt cattgttaca tattctgaca ttgtttttga gtattttttg
    17401 atttttgcaa gctgtgcata gcttggtgaa aactgggtga ttgcaatatc tgcgttttct
    17461 gcttttaaat ctctttgata caagtcttgc catacaatgc tgtaggttct tttatcaatc
    17521 agagtaagca ttgtggtgag tctgtatgtg ggaacaacgg gttctgatgc cgatatgccc
    17581 catttgttcc accaggtttc tttcaaaaac tgactttgta tatccagtcc gcttgttacc
    17641 atcaggatgt aatctgcggg aatatttgcc gttacacgtt tcaggtttac aaaatctacg
    17701 ttgtagttgt acttgtattc tttaaaaaac gtgaggtgat acaagggcag agttttttgt
    17761 gtgatttttg ccatattttc gccaagaagt ggcgctttta ttctttttgt tttattgagt
    17821 tcattgatga tatcttcggc aataatgtcg gacgctgcac cgcaaataat gtagttggtg
    17881 ccgtttctgt ggccggaatc tgttagtaca aggactgtgg gcggttttct tacaaccgcg
    17941 gatgcttgtg tattaatgca catcataact gtaaataaaa caaatattat agcaatgagt
    18001 tttttcatac tttcaaaaat catacctatc cccattattt taattacatt atcgtttatt
    18061 tacatgtgaa tttatatccc ttaaatatac gatatttcgc agtttagggt taacgaatta
    18121 caaatatgta gtaaaatgtt aatacacaat tttacagtgt cacttgaaaa agtgagtaac
    18181 atgacactct gnnaaacaat ccggtgaatt gttttgtgag agggaagggc agttttcggc
    18241 aggttacgac actagattac aggtaaagga ttatgcgcga taatttagaa ttattaaacc
    18301 tagcaaaaca ggcttgtgaa aacgcttatg taccttattc caattttcac gtaggtgcgt
    18361 gtgcgttata tgatacgggt aattattatc ttggctgcaa tgtggaaaat gccagctatg
    18421 gtttgtcttt gtgtgcagag agaaacgcaa tgtcaaacgc agttgttgcc ggagaaaaag
    18481 gcaagcttat aaagatagca atattttcta aagacagaac aaactgtatg ccttgcggcg
    18541 cttgcagaca gtggatgtca gaatttaaaa aagacaatga tttacaaatc attctcgaaa
    18601 gcgaagattc caaatgcgct gtttttacaa tagaagagct tttgccatac gggtttgagc
    18661 tgtaaggcgg tttattcata atcccacata taaatctgtc cgcaatatcg gcacacagcg
    18721 tggttgttca taaagttcag gtcgggtaca aacgtgtatc cgtctactgt tatgactatg
    18781 tctttgtttt tattgtattc ctgtttataa ttttttgcgc ctttataatc cggtgcaaac
    18841 atcagttcaa atttatctac ggatttacag tttttgcaga taaacattaa tcttcttcat
    18901 ccttaacgtt ttttcttttt cttggttttg tctgtttttg cgcacgttct gccaatttgt
    18961 cggcagcaat tttgcctgca taatttcttt tatttatttc tttataaagc tctgtgcagc
    19021 agatgcttct caaaggcaga gtaaaagctg ttacagcaaa agacacaacc gctaacacta
    19081 tgtgctgtgc aattgtatag ctttttagtg tataaggaac atgtgcctga gaaagcattg
    19141 cattannnnn nnnnnnnnna acaggataag agaaaaatcc cgcaaggtca cctacttcaa
    19201 atccccagct tatcagtccg ggtatgagcc agtacgttgt tattccaagc aaaattaaca
    19261 gcactgaagt ttttataaaa ttgaatttta tgtagcttat gcttgctgca attgctttga
    19321 atgcactttt atcttcttcc agcgcaaata cttgaaaact caatgaaaca aatacaaaaa
    19381 ctattgcaag aagaccccac aaaatcggga aagaaagcac aagataaatt acagttagca
    19441 ttaaaagaaa caggatataa gagcctgttc ttctttttat gagttctgca tgcattcctg
    19501 tgtcttcgag ttttgaacct tccaaaaggc tgcttgccat tgagtttagg gctgccatgg
    19561 caataaggta ttcccagaat gctttacaaa aaatgaaaaa tccgggcagc gtcaacaaaa
    19621 gcaacataag aaacactagc ggaatgttat caaaaacagg gcttttggtt gtcagtgttg
    19681 atacatgcag tgtaaaaata tatgaggcaa aaaatatcaa agatacccct attatctggc
    19741 cgaaaacagg gaatgccata tatttaaaga atttttcaaa gtttaaaaaa tacagtttta
    19801 caccgttaaa aaatattttt actgcactta taaacacaga atctttttta gccaaattac
    19861 tatcctttaa ttagttttgt ctgttcaagt tatgtttata ttaacatgta aagtatggac
    19921 gagcaaaata aaaaaataac acaattatta tcaggttttg gcaaggcaga ttttgagaaa
    19981 gacgtggatt tgcatatgca ttcgtgcttt tcagacggca gattgacgcc acaggagctt
    20041 gttgcggatg cgcaaaaaaa gaattacaga tacattgcaa ttgctgacca caatacagta
    20101 gaggcttata aaaaaacaga tatcctgaac acaaaaagcc cgcatatcat tacggcaata
    20161 gagtttgact gctggtacaa aggcgtgctt gttcatattc taggctacgg cgtggatatt
    20221 tataatgaag agcttttgaa gttgtgcgca aaaaacaaaa aggaaacaga atccgatatt
    20281 gtgcgtctgc tcaacagtcg gcaccctaag gatgttataa aagctattca cttagcaggc
    20341 ggggcagctg ttcttgcgca tccggcatgc tactgggcca taagccttga tcattttgtc
    20401 aaaagtctaa aagcactcgg tttagacggt atagaggtat tttaccctta ccgcaggcac
    20461 agggggatta tcaaatttca taaagcttct acagtcaaaa aaatcggcga aaaatacaac
    20521 ctgattatga caggcggttc agattctcac ggtgagattg agagtataat ctaattttaa
    20581 atcgtgaaat tgaaaagctc tgttatatca acttcaagtg catcagctat ttgttttact
    20641 gtataaattc ttgtatcagc tttgccgttt tctatagtgc ctatatggcc tctgtcgatt
    20701 gaaatttttt cggcaagttt ttcttgagat aaattttttt catctcttaa aattcttatt
    20761 ttatgtccga gtttcttaag aaattctact tttgtcatnn ttgtcataaa tagattttat
    20821 ttgattgaca gaataattat tttatctaat ttgacggagc caggatgatt atgaggttgc
    20881 ggccttccat ggaaggtttt ttctcaatgt taataggctc gttttcaagg tctgcaataa
    20941 atctgttggc aaggtcaaaa gcaagttctg tgtgctgcat ttcacggcct ctcaacatga
    21001 taacaatttt aactttgtca ccttgagcaa taaatttttt gatattttta attcttacgt
    21061 tgtaatcgtg tacgtctatt ttgtatctga ttttaatttc ttttacttcg acagtgtgtt
    21121 gttttttctt tgcttctttg gcttttttgt cgagttcgta tttgtatttg ccgtagttca
    21181 ttatttttgc tacaggcggg ttctggtttg gagaaactac cacaaggtcc aggtcttttt
    21241 catcagccat tctttgtgct tctgctgttg aaatcacgcc gaagttttcg ccttcactgc
    21301 ctattaatct gacttctttg catctgatat ttctgttaat cagtgctgaa tctttgccgc
    21361 ttgaaaaatc tctgctaatg gtttgttctc ctttattacg ctattattca atattttagt
    21421 gcgctaaagg atgaaatgtc aacaatcata cggtgtatgc atataatatt tattatgtag
    21481 tctttttgtt ttttgcttta ggcgttcgga aactgtttat atactttgct ttgtacgcat
    21541 aaacaaaaaa caagcaaaaa aattgcgcta aactcttacg ttgttgattt cgttataagc
    21601 gtttacgagt ctgtttctta attggagcgc catttgcatt gtgaggtttg ctttttgaga
    21661 ggccagcatt acttcatgaa cgctgatatc tccgcctgat gcaaatgttt cggctgcttc
    21721 gtaagcagcg ttttgtgaag tgtttacatc attcaatccg ttagaaaaag cctgaccaaa
    21781 tgaattggcg aggttttcta cagcagaatt gcttttgcct ctggaggggt tctgggttga
    21841 attttgagct tcgtaatttc cttctatctt gtctatgggt gatatcccca tattttcaag
    21901 ccccacattc atttgaatac ctgtgttgat aattgggcct tgcgggacgc tttgcgcgtc
    21961 ttgcattttg ctgtttaaaa cattatcaaa agcagtcatt ccgtttttat cagagctgat
    22021 attaaacgaa tccatctgct gtgaaaatat tttgttatag ttttgtattg agttgtttgc
    22081 tatttgatta aactgcaatt tttatactcc cttaaattcg taatgcagca gaaatcatac
    22141 cttttgttgt ctctgccgtt gttacgttgg cttcgtatgc tcttgaggcc gaaaccatgt
    22201 taaccatttc ttcaacaacg ttgatattcg gtaatgtcac aaaaccgtct gcgtccgctt
    22261 cgggatttga agggtcatag attgttttgt aagggtcgtt tgacggtgtg atttcggcaa
    22321 cttcaacgcc ctgtgaaata tttttgtcgt cataagaaat tccgcctttt aaagcaatag
    22381 taccgtttgt cgggctgtag taagcttcgt ggtggccgtc gggaaacgcc ggtgcgtttg
    22441 agcccagtct gtcagcgtag attgctttaa agcttacact tttttttatg taaaccccgg
    22501 gtgtaccgtc agggtttctt gttgtattta cgtttgcgat atttgaggcg atgttgtcca
    22561 tcattgtttt ctgggcatac atgccgctgc ctgaaatatc aaatgcgcta aaactcattt
    22621 attatgaacc tccgcctctt accacatcaa gaaggtttga cataaatctg ccttctattg
    22681 ttgccagaac attgtactgt gagcctgttt tggccattgt catcatttct tcttcaacgt
    22741 ttacattgtt gccgttgccg tagtcaatcc atcttgtgtc tttaattact tccggtgcgt
    22801 agttgtctgt atccgtacgt gtctgttgga tatacataaa ctgttcctgc ggaagccttt
    22861 gagctatgtt agtcgtgtta ggatttgttg tatagcctgc tttgtaaggg tctttttggt
    22921 aagcaaggct gttttgcatt ctcagatctc ttcttacatc atcttttgca atgatttctc
    22981 tcagctggtc ttcaaaggcc acctgttttc tttgataatc aggagtcatt gcgttggcgg
    23041 tgttagaggc aattgcggtt tgtctttttt gcagcccgtc catggctagt ttggtaactt
    23101 ctattgctcg tatgttaaac aagtccattt ttgcctcctt tctatagctt tggcagcgag
    23161 attacaaaag ttgtgctgcc tttttcggaa tttacaagat taaggtctcc gtattgttct
    23221 ttcattgctt cttttgaaat atgaagcccc aatccgcttc cggttgtttt tgaagtgtaa
    23281 ccttcttcaa atattttttc acacgcatct tgttctatac cgcagccatt gtctgtgatg
    23341 tagattttta gcatgttatc tgctgtttct tcagtattga tttttataac gccttgagtt
    23401 tttgctgatt caattgaatc aagagcgttg taaaacaggt taatcattat gtttagcagt
    23461 ttgttttcat cgcacaatac atttgcgtta aatttgttcg aaacttcaaa ttttgtggat
    23521 gttgccattg cttttgcctg tacaagctca attgcatttt gaagtatttt tgagaaattg
    23581 tgtgtttcaa gttttgcacc ctgaatggtt ctcaactctg ttaagagctc tccaatggct
    23641 tgtttcgact tttgtatgct caacacagca ttggacatgg aatcttgcag ctctttgttt
    23701 gctacatttt cgagtctttt ttccatgatt tttgaataca aatcaatgat cgaaaggtgg
    23761 tttttaatat cgtgtgatat tattttggcc tttgtagaaa tatattcgta tttttttgca
    23821 atatcatcgc tttgtccgag cagtcctgct tctgcctgcg tgagagctgc ttcttccaca
    23881 aaagagtctg caaagttgat aaacttgtgt acggatttgt tcaaaagttc gttgcttctg
    23941 cgctccggag tgtattcttg tgtgtatctc atcaaatcga tttttgagtt ttcagagata
    24001 attcttatta cattattcac atctcttgag ttgagcagat aatacaagca tgatgtatct
    24061 tttacagttt ctgtggaata atcccataaa agacatgcgg agtatcttgg tgagagcagc
    24121 acaagaaatt ctgtctcgcc ccagatatcg tctctttgca ggttttcgcc ttttgttgtg
    24181 ttatcaaaag agtaaacctc tgcgtttgtg aattccagcc tttttaagac tccttccagc
    24241 tctgttgagt caaaaagtct ggtgagcaca acagcttttt gattttgtgc ttccagaagc
    24301 ggttccagcg caaagcggaa caaacctttg atggtttgtt tgttaacggg tcttgtttga
    24361 cccagataaa ttaaatcctt taaaagattt ttttgtctga aatttgctcc gcccattatt
    24421 ttctctcaag gaatcttttg attccgctct taccattatt taatttgcgg gcaaaatgcc
    24481 cgcgtaaatt tatttcgcta gattgctatt ttaacttttc ttctgttcaa aaatccgttg
    24541 ttcaatgcat acaaaacagc ctgtgttctg tcattgacct gtaatttttg gaagatattg
    24601 tttacgtgag tttttactgt tgtttcagag ataaacagtt tttgtgcaac acctttgtag
    24661 gttatgccct gtgtaagaag atccagtact tcttcttctc tttgagtcag ataattgaga
    24721 aggttttctt cgtctgcaac gacctgtgtt tcttctttga aggattgctg gaagtattcg
    24781 aagaatcttg aggacaaagc tgccggcaga taaatctttc ctgctgcaac ttcatctata
    24841 gcatagataa gctgagcaga ggccattgtt tttaagatat agccttttgc accgattttc
    24901 attgctctga aaatcaaatc aggatcatcg tagcctgtca aagcgataat acgcactccc
    24961 aaatccagtt tttcaatttc cgcaatagcg gttaaaccgt ctttttcagg catgttaata
    25021 tccattaaaa cgatttccgg acgatacttc ttaattaggc tgattgcaac acttgcactt
    25081 gtagctgttg ccactacatc aaaatcgctt tcaatttcaa ttaactcttt gataccggaa
    25141 aggtgatcat aattgtcatc cacaatgatg attctggctt tcttcttaaa atctagacct
    25201 cttctcatct actcccccca agatttttct ttttttaagt tttaaattct gtaataaatt
    25261 atatttttcg tgtgattata ttatttacac tctgtatatt acctctaaat gaatgagtct
    25321 ctcatcgact agaaggtcga aatagttgca attaactcta ttctgaaaga tttagaccat
    25381 ctggtctaga aaatgccaaa atattatgtc ccgtgtgcgt ttacaaaacc tcaaaaagat
    25441 aatttattag tattactcta ggtttcgcgt atacatagtt taaattagtt agtatgtatg
    25501 aaaatttaaa taaattgttt tgtaaattgc catatgttaa agtagaaaaa ggagcagccg
    25561 gataatcgcg caatttgttt tgtgaggaaa gtccgggcac cccagggcag accgcctgat
    25621 aacgtcaggt gcgggcgacc gtgaggacag tgccacagaa atgcagactg ccgatggctg
    25681 gcgagagcca gcacaggtga tggtgcaacg gtgaggtaag agctcaccgg caaggctgag
    25741 aggtcttggc caggtaaacc ccggttgggt gcaaggttga ctaaaaggtt aaggtgaccc
    25801 gccgtctttt gacaaaccgc ttgagcttac gggcaaccgt gagtcgagac agatgattat
    25861 ttaaacagaa cccggcttat gagctgctcc ttttttctcc gttgccctat gccaatattt
    25921 ttagtaaaat tttaaaagat atattgaaaa agtgagtcaa tgacggctgg aaggttcgag
    25981 gcggcagtga cgacaccgga ttaaagtgaa aatgtattac gcggggtgaa ttttgagcaa
    26041 tttgacttta aaggcaactg ctgtgggaag tcttcctcat aaagatgcta aagaagcaat
    26101 cggacttatt tttgatactt ttaaagaaat accattctgg ccgcagctgg ctaatgttga
    26161 caggcatgag gatatgactg ttcagtatat tcaaggaatt cctgggataa tatacgatga
    26221 aaaaaactgt aaatactgct atgatgccca gtctgacaag ttttttgaag agcttgaaga
    26281 attctttatg gactatgagg caatcgtaaa cgaaaaggat tttacaaacc ttgataaata
    26341 cgcaataaca gcaccgtata caagtgcgat tcctttgtat ttggagaaat ttaaacaggg
    26401 aaattacagc tatgcaaaat gccacataat cgggcccttt acatggggaa caagcctttg
    26461 cggcgaagac ggggtgtgtg ccttttatga tgagacatac agagaagttt tgattaaagg
    26521 ccttacgcta aaagctgttt ggcagataca acagataaaa aaagccaacc ctgacactaa
    26581 accagttatg tttatggacg aacctgttat gtcgcagtac ggtacatcag cttttataac
    26641 tgtaaaaaaa gaagaggttg ttgaagcatt aaaagaaata tctgatataa tcaaagactt
    26701 tggcggcttg tgtgcagtac actgttgcgg caagtctgac tggtcagtgc tcattgaggc
    26761 gggtgttgat atcataaact ttgatgcttt ctcgtattca aagagtcttg gcgcttatgc
    26821 aaaagacatg gaaaaattct taaaatccgg cggatatatt gcctggnnnn nnnnnnnnnn
    26881 nnnnnnnnnn nnnnnnnnnn nnnnnnnnca aaaatttgaa agcgctgtag atgaccttgt
    26941 gcaaaaatca aaagggaaaa tagaaagaga catgattata aaacagagct tttttacacc
    27001 atcatgcgga gcgggcggtt taactatgga gctggccaaa aaggcaatgg tgcttgtgaa
    27061 tgagctttca gagagtttaa aacaaaaata cggggtaaat taatgacatt agcaattgca
    27121 attacaggaa aaagcggaag cggaaaaaca acgattacaa agaattttgt aaaagtttta
    27181 aaagaaacat accccgacaa atccatacta ctttttgata atgatctttc aacagagctg
    27241 gcccacagct acggcatgga tgtgagaaac acaatatatg gtatcagaag cggaaaacac
    27301 gaatataaaa cagggattcc gtctcgtatg acaaaacagg aatatattga atgggcgctt
    27361 gaggatattc ttgttgaagt agaggaaaat gttgacctta ttgtttcgtg gctggttccg
    27421 tcaaaagact gtcgctgtcc tgtcaccggt ttgattgccg acgctgtggc aaagcttata
    27481 aatggctatg acatagttgt gtttgattgc gagtttgacc ttaaatatct tcatcagctt
    27541 gtggacatcc ccatggatgt tacgctcatt gttgcaaatc cgacagaaga atccatattt
    27601 cttgctcagc gtattgagga gttttcagca aaatatgctg caggcggcca aatggctctt
    27661 gtcttgaaca atgttgataa tgagcagtat aataaaatac aggattattt gagcaaatat
    27721 tcgcttgagg ttcttggcgt gattccaaaa gacaaggcac ttttagaaca ctctattgat
    27781 aaaaactcaa aaatagtgga agatgctatt aaggcacttt atttcagatt gaatctgcct
    27841 caggttagaa attaggaatt aattatggca aagttgatag aaggaaaagt tgttgcacaa
    27901 aaaatactgg agaatttgtc tgatgagatt ttgtttttag acaaaaagcc ctctcttgcc
    27961 gtgattattg taggtgatga ccctgccagc aagatatatg ttaatttaaa aaagaaaaaa
    28021 gcacaggagc tgggtattac atcacaggtt atagaaatga acgcctcggt tacagagcag
    28081 gagcttttgg acaagattga tgagctcaat aacaataaag aggtcaatgc aatacttgtg
    28141 cagctgcctt tgcctgcgca tataaatacg caaaaagtta ttgaaaaaat cagcccgatt
    28201 aaagatgttg attgttttca tccatacaat atgggtaaaa ttgccacggg attaaaaccc
    28261 tatgtttatc cttgcacgcc aaaaggtatt atcaggctgc ttgagtatta tgatattgaa
    28321 attgaaggca aaaacgcagt tgttatcgga cgttcaaata ttgtgggccg gccgctcggg
    28381 caaatgcttt tgaacagtaa tgcgactgtt actttttgcc acagcaaaac aaaagacctt
    28441 gcaaaaatta ccaaaaccgc ggatattctg atatgtgcag caggcaggct aaacctgatt
    28501 acacgcgata tggtaaaaga aggcgctgtt gttattgatg ttggcatgaa tagaaaagaa
    28561 gacggaaagc tggcaggaga tgttgatttc ttcaatgtcg aaacagtagc ttcgtacatc
    28621 actcccgtgc cgggcggcgt ggggccaatg acaatttgct ctttgatgca aaatacgttt
    28681 gacttgtaca aaattcaaaa tgaggtataa aaatatggcg caacaatcag tagaaaaaaa
    28741 tccaaataaa gcacagcagt ttttagaata ctttaacaaa gttattgtgc ccgaggcttc
    28801 ttctgttg
//
LOCUS       DABS01000148            7540 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12964, whole genome shotgun sequence.
ACCESSION   DABS01000148 DABS01000000
VERSION     DABS01000148.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7540)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7540)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7540
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..1300)
                     /gene="ligA"
                     /locus_tag="CPT85_06565"
     CDS             complement(<1..1300)
                     /gene="ligA"
                     /locus_tag="CPT85_06565"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00575"
                     /note="this protein catalyzes the formation of
                     phosphodiester linkages between 5'-phosphoryl and
                     3'-hydroxyl groups in double-stranded DNA using NAD as a
                     coenzyme and as the energy source for the reaction;
                     essential for DNA replication and repair of damaged DNA;
                     similar to ligase LigB; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase (NAD(+)) LigA"
                     /protein_id="DAB22289.1"
                     /translation="MKNCKRIMTWLNRLSLFVXIDGLAISLTYKNSKFTLGATRGDGT
                     VGENITNNLRTIKTIPHVLPDKINDLEVRGEVFMPKSSFEKLNASQRAINAKLFANPR
                     NAAAGSLRQLDAAITESRDLAMFSYYGRIDSNEFNIESHSQMLEFLEKEGFNVNPAYK
                     VCKNVEEAIEYCKYWDTRRHELDYATDGVVIKLNSFELQNETGFTSRAPRWATAFKFP
                     PEEISTIVEDIEINVGRSGAVTPVAILEPVYISGSTVQRATLHNFDEIKRLNINIGDR
                     VLIKKAAEIIPKVICVTEHSQHNDTAYLPPEFCPSCGTKLVEMEGEVNLYCPNTYGCP
                     EQIKGRLEYWVSKDCMDIDGIGDNIVAQLVDKKMVLTAADLYKLTVDDFLKLDLIAKK
                     SAQNLYNVIQASKNPTLARFINSLGIRHVGKETSELIAQRF"
     gene            complement(1212..1532)
                     /locus_tag="CPT85_06570"
     CDS             complement(1212..1532)
                     /locus_tag="CPT85_06570"
                     /inference="COORDINATES: protein motif:HMM:PF01653.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22295.1"
                     /translation="MXXEYYELDAPTVSDVEYDQLLKELESLENEFPQFKSPDSPTLK
                     VGGSAEKRFAQHRHKVRLYSLDNTYSYDELISWYEKLQKNYDLAKPPELVCXNRRACH
                     FSYI"
     assembly_gap    1245..1246
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1524..1529
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1641..2996
                     /locus_tag="CPT85_06575"
                     /pseudo
     CDS             1641..2996
                     /locus_tag="CPT85_06575"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01276.18,HMM:PF03711.13"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1728..1729
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2968..2978
                     /estimated_length=11
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2999..3925)
                     /locus_tag="CPT85_06580"
     CDS             complement(2999..3925)
                     /locus_tag="CPT85_06580"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22290.1"
                     /translation="MLFKAIDKFFDKIKYLLSLIIFVLIAMATLFFIYWLLFSAKIAM
                     PEWFNRFAWSNIDFWAQVIKGTPLYKELIPVLPVLVSGVYIILTYFANCLMTFLENNH
                     KRFGQCVEQYKSNLARTINEELHNDFINELKRTTFMMFKIKVAVTKQESYLNALTLDN
                     VDPIQLEDTIQKQILTAVSSDLIQEKGMDNNSVYFVITDFEKARDFMLQLVNTSADKI
                     KAQMRPKITIGFYCGVELYNDIEEKDNIKAYLDKIVDLKITNKIAATPRFKLYYENIY
                     PTYFWFDLMGEYNLSKSEDSPKNIMIYSIKRK"
     gene            complement(3926..4786)
                     /gene="panC"
                     /locus_tag="CPT85_06585"
     CDS             complement(3926..4786)
                     /gene="panC"
                     /locus_tag="CPT85_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003517257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="DAB22291.1"
                     /translation="MSITVVNEIARLREIVKTYKKEGKTIALVPTMGCLHNGHKSLME
                     KAHSVADVTIISIFVNPIQFCPGEDYDKYPRTLDADKEVAQSAGVDVIFAPSVNEMYP
                     QLQKFSDLTMVVPPYELTDIMCGKSRVGHFDGVETVVTKLFNIVQPDYACFGMKDIQQ
                     LFLIKKMVKDLNFPIEIIPCPLVREDSGLALSSRNKYLSDEQKSAALTISKSLFAIEQ
                     MYKAGVKDTKKLFDTGLTNLDKNVELEYLEFVDEDSFKQTDIVQKNTICSIAAKVGQV
                     RLIDNIILEV"
     gene            complement(4767..5645)
                     /gene="panB"
                     /locus_tag="CPT85_06590"
     CDS             complement(4767..5645)
                     /gene="panB"
                     /locus_tag="CPT85_06590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017248146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="DAB22292.1"
                     /translation="MSVETKLKDVTVNTFFKKKENNEKITMLTAYDCSTAKYFDNAGV
                     DAILVGDSVGMVVLGYESTQHVTMTDMKVFTAAVARGAKRSMIIADMPFMSYHTSVEE
                     AVKNAGELVRAGAYAVKLEGATDYILTVVKRCVESGIPVMGHLGFTPQYLNVLGGYKV
                     QGKSAENTRFILNQARKLQEAGAFSVVLEMVPEESAALISKNLKIATIGIGAGRYTDG
                     QVLVADDILGKFSDFKPKFARRYADLKSVIENAAMGYISDVTTGEFPDESEIFHLSKE
                     EQDALKEIEDNEYNRC"
     gene            complement(5654..6952)
                     /locus_tag="CPT85_06595"
     CDS             complement(5654..6952)
                     /locus_tag="CPT85_06595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_927110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22293.1"
                     /translation="MPKDAGWLLPGLQVKRWFGLIILGTIIALLGLCVLFNMRPVYFA
                     VGILKYIAVTVNQEFLGVILLLAGAYIFLKGWKNTNYSILDLTEERDRHALLESLYKR
                     RKLNYGPKIVAVGGGTGLSTMLKGIKKITNNITAVVTVGDDGGSSGRLRHEMGVLPPG
                     DIRNCIAALADDEDLVTKLFQYRFKTGEGLEGHSFGNLFLTALCSITGNMVRAVHESA
                     KVLNIRGRVLPSTLDDMKLSAEMEDGTIVEGESNIPETGKKIKRLFTTPANCKPLPEV
                     IQAIKEADLIILGPGSLYTSVIPNLLIKEISEAISKSSAKKIYVCNIMTQPGETTGYS
                     AADHIQAILDHAGYPNMVQAMLVNNSLPDDLSPDYEKSDSFPVVVDVDTIKAKNINVV
                     STRLYEENDQKYVRHSPSRLARAIEYWYKKQLRAKDKAKK"
     gene            complement(7008..>7540)
                     /locus_tag="CPT85_06600"
     CDS             complement(7008..>7540)
                     /locus_tag="CPT85_06600"
                     /inference="COORDINATES: protein motif:HMM:PF03746.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22294.1"
                     /translation="QAVENCKFKSKVLGALIGFKESVNDPAALSSEEIEAVVLYQLGA
                     ISAFAKAYSLNIEHVRPHGLMYELLNTNKEFALNFANSVKKFNRWFVLYGPDSEVFNQ
                     AAQETGMNIAKEFIVENVDSVSALKELIESNKMPDTIHFHTSVENVKSLMESVKEFAN
                     ARPVNFNNVVSSGWVD"
BASE COUNT         2332 a         1498 c         1227 g         2462 t
ORIGIN      
        1 aaaaacgctg tgcaatgagc tcagatgttt ctttaccaac atgccttatg ccaagggaat
       61 ttataaatct tgccagtgta ggatttttag atgcttgtat aacattatac agattttgtg
      121 cagacttttt ggcaatcaaa tcaagcttta aaaaatcatc aacagttaat ttgtacaaat
      181 cagcagcggt taacaccatc tttttatcaa caagttgggc aacaatgtta tcacctattc
      241 cgtcaatatc catacaatct ttggagaccc agtactccaa tctgccttta atttgctcag
      301 gacagccata ggtattagga cagtacaaat taacttcgcc ttccatttcc acaagttttg
      361 ttccgcaaga aggacaaaac tcaggaggta aatacgctgt gtcattgtgc tgagaatgtt
      421 ctgtaacaca aataactttt ggaataattt ctgctgcttt ttttatcagc actctgtcac
      481 caatgtttat attaagacgt ttaatctcat caaaattatg caaagtagct ctttgtaccg
      541 tggagccgga gatataaaca ggttctaaaa tagcgaccgg agtaacagca ccgcttctgc
      601 caacattgat ttctatatct tcaacaattg tagatatctc ctccggaggg aatttgaaag
      661 ccgttgccca gcgaggagcc cttgaggtaa aaccagtttc attttgtaat tcaaagctat
      721 ttagttttat cactacacca tccgttgcgt aatcaagttc atgtcttctt gtatcccagt
      781 atttacaata ttcaatagct tcttcaacat ttttgcagac tttgtacgca gggttaacat
      841 taaacccttc tttttctaag aactcgagca tctgtgagtg agattctata ttaaactcat
      901 tgctgtctat tcgaccataa tatgaaaaca tagccagatc tctggattct gtaatcgctg
      961 catcaagctg ccttaatgaa cctgctgcag catttcttgg attggcaaaa agcttggcat
     1021 ttatcgctct ttgtgaagca tttagttttt caaaagaact tttaggcata aagacttcgc
     1081 ctctgacctc gagatcatta atcttgtcag gtaaaacatg cggtatagtt tttattgttc
     1141 tcaggttgtt tgttatattt tcaccgactg taccgtctcc tcttgttgcg cctagagtaa
     1201 attttgaatt cttatatgta agagaaatgg caagcccgtc tattnncaca aacaagctca
     1261 ggcggtttag ccaggtcata attcttttgc agtttttcat accagctgat taactcgtca
     1321 taagaatatg tattatcaag gctgtaaagt ctgactttat gtctgtgctg agcaaatctt
     1381 ttttctgcac ttccaccaac cttcagcgtg ggagaatccg ggcttttaaa ctgagggaac
     1441 tcattttcaa gagattccag ctcttttaaa agttggtcgt actctacatc tgaaactgtt
     1501 ggcgcatcta actcatagta ctcnnnnnng atgttaactc tgctatcctt ttttgagcct
     1561 gttgactatc catattatta aaggcttatt tcctgtataa tctacacagt agtattttac
     1621 aacaaaaagc gttagatatt atgagtctta taagaaaaat taaggattat tataaaacac
     1681 aaaaaagatt actttttact acgccgtcgc attcattggg gaattttnnt attattcccg
     1741 aggcacaaaa attgcttggt aaaaagtttt ttagaacaga cttttccgaa attgagggtt
     1801 tagataatct taggcatccg gaaggtgcga taaaagacct gcttgctaaa atttcaggta
     1861 tatacaactc aaaaggctct tttgtactga caaacggatc gacttccgga gtacttgctg
     1921 ctatgctggc aattctaaaa caaggtgata aggttttggt tgcaagaaac tgtcatataa
     1981 gtgtctgtaa cggattggtt ttaacaggtg caaggccgat atggtttttg ccggaatatg
     2041 acaaagactg gtctatttac aaaggtgtaa aagcagctga tattcaaaaa tatctggaag
     2101 ataatgaaga tataaaggct ctgatactaa caagccccac atacgaaggg ttggtatctg
     2161 atattaagtc gatatccgtt atttgcaaaa agcataatgt taaactcatt gttgatgaag
     2221 cacatggcgc attatttaac tttttaaaca atgaacataa accagccata ctggaaggtg
     2281 cagacataag tgtagaatct ttgcacaaaa cagcaggagc tccaaaccca tgtgctgttt
     2341 tgcatgttgg tcaaacatct gacatccata cttcatcaat acaagatgcg ctcaatctta
     2401 ttaacacaac atcgccctca tatcctttga tgtgtgccgc agaagcttgt attgattacc
     2461 taaactcgat acagggcaaa aaacatttgc ataaactttt agaggatata aacagcttta
     2521 aaaattcatt acgaagtatt gttgactttt atgatgataa taatgattca acaagattgc
     2581 tgatgcgttt aaaaaacaaa aataatgctg aagcagcaga aatattaaat aaaaaatacg
     2641 gcatagaaga agaatactca acaaatagtt ttatgctctt cataacagga atcggcacgg
     2701 ataaaacaaa attaaaccga ttgaaaaatg cactaaaaaa agtatacaaa aatatcggta
     2761 acatatctga caaacataaa tatgaaacct acaacatacc aactatggca ctaactcctg
     2821 ctgaagctta tacaaaagat tacgaaatca tagatacttc caaatctgca ggccgcattg
     2881 catacgagac tattgctgca tatcctcccg gtattccggt aataatttcg ggcgaagtta
     2941 tcacactgca gagcctgttt cttatcgnnn nnnnnnnnat aaaagtaata aaatagcgct
     3001 attttctttt gattgaataa atcataatat tttttggtga gtcttcactt ttactcagat
     3061 tgtactcacc cattaaatca aaccagaaat aagttggata aatgttttca taatacagtt
     3121 taaaccttgg tgtagctgca attttatttg ttatttttaa gtcaacaatc ttatcaagat
     3181 atgcttttat attatctttt tcttcaatat cattataaag ctccacaccg caataaaaac
     3241 ctatagtaat tttgggacgc atttgtgcct ttatcttgtc agcagatgtg ttgacaagct
     3301 ggagcataaa atctctggct ttttcaaaat ctgtgattac aaaatataca gaattgttat
     3361 ccataccttt ttcttgtatt aaatcagaag aaacagctgt tagaatctgt ttttgaatag
     3421 tgtcttccag ctgaatcggg tcaacattat caagcgttag agcatttaag tatgactctt
     3481 gctttgttac agctactttt attttgaaca tcataaaagt agttcttttc agctcattaa
     3541 taaaatcatt atgtagctct tcatttattg tacgtgcaag gtttgattta tattgttcaa
     3601 cacattggcc aaagcgttta tggttatttt caagaaacgt cattaagcag ttggcaaaat
     3661 acgttagaat aatgtaaact ccggaaacaa gcaccggcaa tacaggtata agctctttat
     3721 aaagaggtgt gccttttatt acctgagccc aaaaatcgat attactccac gcaaagcggt
     3781 taaaccattc aggcatagct atctttgcac taaataaaag ccaatagata aaaaatagtg
     3841 ttgccattgc aattaataca aaaataatca atgataacaa atattttatc ttatcaaaaa
     3901 atttatctat tgccttaaaa agcatttata cctctaaaat aatattgtcg attaatctta
     3961 cttgtccaac ttttgctgca atggagcaga tagtattttt ttgaacaata tccgtttgct
     4021 taaaagagtc ctcatctaca aattccagat actccagttc aacattttta tcaagatttg
     4081 tcaatcctgt gtcaaacaat ttttttgtat ctttaacacc cgctttatac atttgttcaa
     4141 tagcaaaaag agatttgcta atagttagtg ctgctgattt ttgttcatca gaaagatatt
     4201 tgttgcgaga actcaacgca agcccgctat cctctctcac tagagggcac ggtatgattt
     4261 caattggaaa attcaaatct ttaaccattt ttttaatcaa aaacagctgt tgaatatctt
     4321 tcataccaaa acatgcataa tcaggttgaa caatgttaaa gagttttgta acaactgttt
     4381 cgaccccgtc aaaatgtcct accctggatt ttccgcacat aatatctgtc aattcgtacg
     4441 gaggaacaac cattgtcaaa tcagaaaatt tttgcaactg cggatacatt tcgtttactg
     4501 atggtgcaaa aataacatca acacctgcac tttgagcaac ttccttatcc gcatcaagtg
     4561 ttcttggata tttgtcataa tcctctcccg gacagaactg tattggattg acaaaaatcg
     4621 aaataatagt tacatcagct acgctatgag ctttttccat caaagatttg tgaccgttat
     4681 gcaaacatcc catagtggga acaagtgcaa ttgttttgcc ttctttttta tatgttttta
     4741 cgatttctct tagtcttgca atttcattaa caacggttat actcattgtc ttctatctcc
     4801 ttaagagcat cttgctcttc tttgctaagg tggaatattt cagactcatc aggaaactct
     4861 cctgttgtaa catcagaaat atagcccatt gcagcatttt ctataacact ttttaaatca
     4921 gcatatcttc ttgcaaattt aggtttaaaa tccgaaaact tgccaagtat atcatctgca
     4981 accagaacct gcccatctgt atatcttcct gcaccgatgc cgattgtggc aattttcaag
     5041 tttttggata tcaatgcagc agattcttca ggaaccattt ccaacacaac ggaaaaagca
     5101 cctgcctctt gaagtttgcg tgcttgattt aatataaacc ttgtattttc tgcagacttg
     5161 ccctgtactt tgtaaccgcc cagtacattc aaatattgag gagtaaaacc aagatgcccc
     5221 atcacaggaa tacctgattc tacgcatctt ttgactactg ttaggatata atctgttgct
     5281 ccttccaatt ttactgcata agcaccagct ctgaccaact ctccagcatt ttttacagct
     5341 tcctcaacac ttgtgtgata actcataaac ggcatatcag ctattatcat agaacgttta
     5401 gcccctctgg caacggctgc tgtaaaaacc ttcatatctg tcattgtaac gtgctgtgtg
     5461 gattcataac ccagcaccac cattccaaca gagtcgccaa caagtatggc atctacacct
     5521 gcattgtcaa agtactttgc cgtagagcag tcatacgcag tgagcattgt tattttttca
     5581 ttattttctt tttttttgaa gaatgtgtta acagttacat cttttaattt agtttcgact
     5641 gacataatat cacctacttt ttagctttat cttttgccct caactgtttt ttgtaccagt
     5701 attcaattgc tctggccaaa cgagaaggac tgtggcgcac gtatttttgg tcattttctt
     5761 catataatct agtacttacg acattaatat tctttgcctt gattgtatca acatcaacca
     5821 caacagggaa agaatcagat ttttcataat caggagataa atcatcaggc aaagagttat
     5881 taacaagcat tgcctgcacc atattgggat atcctgcatg atctaatatt gcctgtatat
     5941 ggtctgctgc ggaataacct gttgtttctc cgggttgtgt cattatgttg caaacatata
     6001 ttttttttgc agatgatttt gaaattgctt ctgaaatttc ttttatgagc aaattgggaa
     6061 taacacttgt atacaaactt cccgggccaa gaataatcaa gtcagcttcc tttatagcct
     6121 gaataacctc cggtaaaggt ttgcaatttg caggtgttgt aaaaagacgt ttaattttct
     6181 ttcctgtttc aggaatattg gattcacctt caactattgt accgtcttcc atctctgctg
     6241 ataacttcat atcatccagc gtagaaggca atacacggcc tctgatattt aataccttgg
     6301 cagactcatg tacagcgcgt accatattac cggtaattga acataacgca gtcaagaaca
     6361 gattgccaaa gctgtggcct tcaagacctt cacctgtttt aaaacgatat tggaaaagtt
     6421 ttgttacaag gtcttcatca tcagcaagtg ccgcaataca gttacgaata tctccaggag
     6481 gcaaaacacc catttcgtgt cttaaacggc ccgagctgcc gccatcatca ccaacagtaa
     6541 caacagctgt tatgttattt gtgatttttt taataccctt aagcattgtt gaaaggcctg
     6601 taccgccgcc tacagcaaca atttttggac cgtagtttag ttttcttctt ttatataaag
     6661 attccaaaag agcatgcctg tcacgttctt ccgtcaaatc aaggatcgaa taatttgtat
     6721 ttttccaacc ttttaaaaag atatacgcac cggcaagcaa aagtattaca cctaaaaact
     6781 cctgattaac tgtaactgca atatatttga gtatgccaac agcaaagtaa acaggtctca
     6841 tattaaataa aacacaaagc ccaagaagcg ctattatcgt tccgagaata ataagaccaa
     6901 accatctttt tacctgcaat cccggtaata gccatccagc gtcttttggc atactaattt
     6961 tatataaaat ctttttcaaa acatttctcc ctgttaacct gtcttattta gtcgacccag
     7021 ccggatgata caacattgtt gaaattcacc ggtcttgcgt ttgcaaattc ttttacactt
     7081 tccatcaaag attttacgtt ctctactgag gtgtgaaaat gtattgtatc cggcatttta
     7141 ttactttcaa tcagctcttt tagcgctgat acagaatcca cattttctac aataaattct
     7201 ttggcaatat tcatgccggt ttcttgtgca gcctgattaa atacctcact atcagggccg
     7261 tataagacaa accaccggtt gaatttttta acagagttgg caaaatttag agcaaactct
     7321 ttgtttgtgt ttaacaattc atacattagc ccatgtggtc ttacatgctc aatattcaag
     7381 ctgtatgctt ttgcaaaagc tgaaattgca ccaagttggt aaagaacaac tgcttcgatt
     7441 tcttcagaac ttaatgcagc agggtcatta acagactcct tgaacccgat taaagctcca
     7501 agaactttac ttttaaattt acagttttca accgcctgtt
//
LOCUS       DABS01000149            5983 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_7456, whole genome shotgun sequence.
ACCESSION   DABS01000149 DABS01000000
VERSION     DABS01000149.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5983)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5983)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5983
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..1047
                     /locus_tag="CPT85_06605"
     CDS             <1..1047
                     /locus_tag="CPT85_06605"
                     /inference="COORDINATES: protein motif:HMM:PF13502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22262.1"
                     /translation="SRADLTADLIINGTAQKPNVNGNILLTDVLIPQYFIKAQNIALS
                     LNKSFINAQINNLKIKSMDVSIEAIAPTDALQTNNINYLKLNSQYIDMDYLMALMPLF
                     EQAKYGPGTEFPFIIKTGKVNIKSFKTGQIKAENISADISSKKNILLINKMFADAYGG
                     KAAGNITYNFPYNSLHADIQGRNMDAASAAKDFLPGDQKISGRLNFDASVDMLGTSFE
                     QQMKTLKGRADILVKNGHLGPLGRFEHFLYAQNLLSQKLIYASLNSAKQAISPKDTGY
                     VTYLKGMIKFSSGYAHLNPVLTSGPQMSMYITGSINLLTNYTDXFTNFGQSLLRSFKL
                     YGTFRHCNNKRLFR"
     assembly_gap    959..960
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1004..1393
                     /locus_tag="CPT85_06610"
     CDS             1004..1393
                     /locus_tag="CPT85_06610"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22263.1"
                     /translation="MGLLGTVTIKDFLDEHTKYGPAIANLFNSFNTEIPEMDISRIPA
                     LSPDYRYQTKNFRVVIEGDPDSVKSVKSFTWVNPTGTKKKAISQKEAAAEKQTPAILP
                     EQNNEQKPSQPSAQPDFLNSIPDSFHE"
     gene            complement(1368..2936)
                     /locus_tag="CPT85_06615"
     CDS             complement(1368..2936)
                     /locus_tag="CPT85_06615"
                     /inference="COORDINATES: protein motif:HMM:PF02872.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22264.1"
                     /translation="MFVNNNFNRFNFKAAANAAQSDNNGEVRTRNLYANDMHGILSGY
                     RKMITVRDRFEAENKKNPSIIASTYLSGDGNVGANRQKNKLVIALENFIKPRAKAPGN
                     HDFDDQGSKGLSELLDDSKVKTLALNLVTKPNSALQDDIDAGRLAKSMIFEENGQKFG
                     VIGLIPSDLFKRINQQSKDKSKDIDVLNLQDTIKAVQDEVNKMEAQNVNKITLVSHMG
                     IDADKEIIKNVVGVDIVHGAHSHDLLKGLVPGENYFISKRGEPVIMTQAGKNGHWYGI
                     LDVVYDKNGKIIKAKNDVKSLDDETDSLKAVVLEKMMIGEPKKIGELAHDVKSMPETI
                     LDENPMCSFLCDAYKKLTGADIVLNNAGTMRNTLHKGDVTDRMIIDMMPYYNNISTYK
                     LSEKDIVDAINSGIEATAKYHRTGALQVAGMSYVIGKNGKIKEAYLLKDDGTKESMNV
                     QNPRADKFYTVAYNSFLGGGTDGLEMLHAPEKMIKTFDANETDLLIDYFKTFDNKPLS
                     IDKTGRITREKNQV"
     gene            2994..4325
                     /locus_tag="CPT85_06620"
     CDS             2994..4325
                     /locus_tag="CPT85_06620"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22265.1"
                     /translation="MLLTFVYILYFRGNLFNSIVFIYVRLDLLQVVKVMMNSVSGYSY
                     NPYPAAYRAASGAVVLNKNEIQNLIKFTNGEPIATVQEPGVVETAVGVLPFAGIMGGF
                     QGIGALKNNGLSGQELENFKAARKAGTAKGWNFSETIKNVKKQYPYTRGQAVNAGRDF
                     LNREYGDFFKSRTTPNEARLPFGMGKLMDKIPGYARLRETGFGKAMGRSGAGFMAVMD
                     GTIKTFTDVVPAFQQLGFKSGMKQIAKTGTEVGVGAVGWLAGDALGMSVGAAIGTAIC
                     PGVGTAIGGFLGRFIGGAIGGAVAAKTAKAITGKSEIELAKESAIKETTVQVENDPAT
                     KLVLAQEALKQAESILAEDPKNEEALMAKATAEKIILDAQAAQQVQTAQTTQNVEQQI
                     NKNNSNISTGVFNGVPVVPGFNGYNYDMNQYKQAAGSASLLNANSANPFIK"
     gene            complement(4485..4673)
                     /locus_tag="CPT85_06625"
     CDS             complement(4485..4673)
                     /locus_tag="CPT85_06625"
                     /inference="COORDINATES: protein motif:HMM:PF01402.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="DAB22266.1"
                     /translation="MSRVLISMPEKFLDEIDQVADNENRSRSELIREALRTYIHRNKV
                     RENTLAAKNATILEALLD"
     gene            complement(4866..5309)
                     /locus_tag="CPT85_06630"
     CDS             complement(4866..5309)
                     /locus_tag="CPT85_06630"
                     /inference="COORDINATES: protein motif:HMM:PF00485.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22267.1"
                     /translation="MLLKVSXXLLKEDLTKLSNGENIKAPEYLINGTGVSVPNSIPIS
                     AEKFILVEGMAAMYKDIKDLFDVKIYIDIDPKIQKKWFMERASKRNQSEENALKHWDY
                     VGDAAEKYIRPSKSEADXIINGASSLDYFSQIIEFIHTATNCFIS"
     assembly_gap    4951..4952
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5218..5523)
                     /locus_tag="CPT85_06635"
     CDS             complement(5218..5523)
                     /locus_tag="CPT85_06635"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22268.1"
                     /translation="MIENPNKKFLIGVTGESASGKTTICKQIKKTSTDLDFPLEFLSI
                     DNYFNDISDLIAKYGTFDALRDNGYDVDSPESFQXXFKGRFDKAFKRRKYQSTGVSY"
     assembly_gap    5286..5289
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5537..5716)
                     /locus_tag="CPT85_06640"
     CDS             complement(5537..5716)
                     /locus_tag="CPT85_06640"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22269.1"
                     /translation="MLIDKENNSKDKIIKPDFSTKTGREFLAFYLQTKFKQILSYDKK
                     TERPIFKEINXQFHF"
     assembly_gap    5553..5554
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5739..>5983)
                     /locus_tag="CPT85_06645"
     CDS             complement(5739..>5983)
                     /locus_tag="CPT85_06645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013780337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22270.1"
                     /translation="PGIAASMFKALAESGINIKMISTSEIKISCLVEKEQSDAAIKAL
                     HTAFHLDSKETAVVMGDLPDVXXFIKLFIKTNKFFN"
     assembly_gap    5783..5784
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1955 a         1070 c          998 g         1948 t
ORIGIN      
        1 tccagagccg atttaactgc agatttaata ataaacggta cagcacaaaa acctaatgtt
       61 aatggcaata tacttttaac agatgtatta atacctcaat actttataaa agcacaaaat
      121 attgcacttt cattaaacaa atcttttatc aatgctcaaa taaataatct aaaaataaaa
      181 agcatggatg tttcgataga agctattgcg cctacagatg cacttcagac aaacaacatc
      241 aattatctta agctgaactc acaatatatt gatatggatt atcttatggc attaatgcca
      301 ttatttgaac aagcaaaata cggtcctggt acagaatttc catttatcat taaaacagga
      361 aaagtgaaca taaaatcttt taaaaccggt cagataaaag cagagaatat ctcggcagac
      421 atatcatcca aaaagaatat cttgctcata aacaaaatgt ttgcagatgc atacggagga
      481 aaagcagccg gaaatataac atacaatttc ccatacaact cgttgcatgc cgatatacag
      541 ggaagaaaca tggatgcggc ttctgctgca aaggattttt taccgggaga ccagaaaatt
      601 tcaggcaggt tgaactttga tgcttctgta gatatgcttg gcaccagctt tgaacaacaa
      661 atgaaaacgt taaaaggaag agccgatatt ctcgtcaaaa acggacattt aggtcctctc
      721 ggacgattcg agcacttttt atatgctcaa aatttacttt cacaaaagct gatttacgcc
      781 agccttaaca gtgcaaaaca ggctattagc cctaaggata cgggttatgt aacatattta
      841 aaaggtatga ttaaattttc gtcaggttat gcacatctta accccgtcct tacatcaggt
      901 ccacaaatga gtatgtatat aacaggcagc attaatttat tgactaatta tacagattnn
      961 tttacaaatt ttgggcagag tctcctcaga agtttcaagc tctatgggac ttttaggcac
     1021 tgtaacaata aaagactttt tagatgaaca tacaaaatac ggaccagcca tagcaaattt
     1081 attcaattct tttaatacag aaattccgga aatggatatt tcaagaattc ctgcgttgag
     1141 tccggattat cgatatcaga caaaaaattt ccgtgtggta atagaaggag accctgacag
     1201 tgtaaaatct gtaaaatcat ttacctgggt aaatccaaca ggcacaaaga aaaaagctat
     1261 atctcaaaaa gaagccgctg ctgaaaagca aacacctgct attttgccag aacaaaataa
     1321 tgaacaaaaa ccatcacaac catcagccca gccagatttt ttgaattcta tacctgattc
     1381 ttttcacgag tgattctacc ggttttatct atggatagag gtttgttatc aaaggtttta
     1441 aaataatcta tcaacaggtc tgtttcattt gcatcaaagg ttttaatcat tttttccgga
     1501 gcgtgaagca tttctaaacc gtctgtacct ccaccaagga aagaattgta tgcaacagta
     1561 tagaatttat cggctctagg gttttgtaca ttcatagatt ctttagtgcc gtcatctttg
     1621 agaaggtatg cttctttaat ttttccgttc ttgcctatta cataagacat gcctgcaacc
     1681 tgcaaagcac ctgttctgtg atatttcgca gtagcttcga taccgctgtt tatagcgtct
     1741 acaatatctt tttcactcaa tttgtaagtt gagatattat tataataagg catcatatca
     1801 ataatcatac ggtcagtaac atcgccttta tgcagggtat ttctcattgt tcctgcattg
     1861 tttaaaacaa tatcagcacc cgtaagtttt ttgtaagcat cacaaaggaa agagcacatt
     1921 ggattttcat ccagaattgt ttccggcatt gattttacat catgagcaag ttcaccgatt
     1981 tttttaggtt caccaatcat cattttttca agcacaactg cttttaagct gtcagtctca
     2041 tcatcaagag attttacatc gtttttggct tttatgattt ttccgttttt atcataaaca
     2101 acatccagta tgccatacca gtgtccgttt ttgccggctt gtgtcataat tacaggctcg
     2161 ccgcgctttg atataaaata gttttcgcca ggaacaagcc ctttaagcag atcatgagag
     2221 tgagcgccat gaacaatatc aacacctaca acgtttttga taatttcttt gtcagcatct
     2281 atacccatat gagatacaag agtaattttg tttacattct gtgcttccat tttattaact
     2341 tcatcttgta cagcttttat tgtgtcttga agattaagca catcaatatc tttgctttta
     2401 tctttacttt gttggtttat tcttttaaat aaatcagaag gtattaaacc tatgacaccg
     2461 aatttttgtc cgttttcttc aaaaatcatt gattttgcca atctgcctgc atcaatatca
     2521 tcttgcaaag cagagtttgg ttttgttaca agattcaaag ctagagtttt cactttagaa
     2581 tcatcaagaa gctctgacaa acctttggag ccttgatcat caaaatcgtg atttcccggc
     2641 gcttttgctc ttggtttaat aaaattttcc aaagcaatca caagtttatt tttttgcctg
     2701 tttgcaccaa cattaccgtc acctgaaaga taggtagaag caataataga aggattcttt
     2761 ttgttttctg cttcaaatct gtctcttact gtaatcattt ttctataacc gctcaaaatg
     2821 ccatgcatat catttgcgta tagattcctt gtccgaactt ctccgttatt atctgattgt
     2881 gcggcatttg ctgcggcttt gaaattaaaa cgattaaaat tgttattaac aaacatatga
     2941 gaattccacc acttctgtca ctaatataaa acagatgata atgaattttt gccatgttgt
     3001 taacatttgt ttacattttg tattttagag gaaatttatt taactcaatt gtttttatat
     3061 atgtaaggtt agatttatta caggtagtta aagttatgat gaatagtgtt tcaggttaca
     3121 gctataatcc atatccggca gcatacagag cagcttccgg tgctgtagtt ttaaataaaa
     3181 atgaaataca aaacctgata aaattcacta acggagaacc tattgcaact gttcaagaac
     3241 ctggtgttgt ggaaacagct gttggagttt tgccttttgc aggtattatg ggcggttttc
     3301 aaggaatcgg agctttaaaa aacaatggtc tttcaggtca agaacttgaa aactttaaag
     3361 ctgcgagaaa agccggcaca gctaaaggtt ggaatttttc tgaaacaatt aaaaatgtaa
     3421 aaaaacaata tccatataca agaggtcagg ctgttaacgc aggaagagac ttcttaaaca
     3481 gagaatacgg agatttcttt aaatcaagaa ctacacctaa cgaagcaaga cttccctttg
     3541 gtatgggaaa attaatggac aaaattcccg gatacgcaag acttagagaa acaggttttg
     3601 gtaaagctat gggacgttcc ggtgcaggtt ttatggcagt aatggatggt acaataaaaa
     3661 catttactga tgttgtaccc gctttccaac aattaggttt taaatcaggt atgaaacaaa
     3721 ttgctaaaac cggtacagaa gtaggcgttg gagcagtagg ctggttagca ggtgatgcac
     3781 tcggtatgtc tgtaggtgca gcaatcggta ctgcaatatg ccctggcgta ggtacagcaa
     3841 ttggcggttt cttaggtaga tttataggtg gtgctattgg cggagcagtt gctgcaaaaa
     3901 cagcaaaagc aatcaccggc aagtctgaaa tcgaattggc caaagaaagt gctattaaag
     3961 aaacaactgt tcaggttgaa aatgatccag ctacaaaatt agtacttgca caagaagcac
     4021 ttaaacaagc agaatctata cttgcagaag atccaaaaaa tgaagaagca ttaatggcta
     4081 aagcaacagc agaaaaaatc atcttggatg cacaagcagc acaacaagtc cagacagcac
     4141 aaactacaca gaatgtagaa caacagatta ataaaaacaa tagtaatatt tcaaccggtg
     4201 ttttcaacgg agtacctgtt gtaccgggat ttaacggata caactacgat atgaaccaat
     4261 ataaacaagc agcaggttca gcatcacttt taaacgctaa ttcagctaat ccgtttatca
     4321 aatagaatag actattataa accaatacca taataaacta accataaaat aaagcggtcc
     4381 gaatatatcg tgaccgcatt tttttaataa aacctatttc cttttcccct attagtccag
     4441 tattgcgtct agttttaaga attttgttga taattaaagc ttttttagtc cagtaatgcc
     4501 tctaagatag tagcgttttt ggctgcaagt gtgttttcac gtactttgtt tctgtgaatg
     4561 taagttctca atgcttcacg aatcaattca cttcttgaac gattttcgtt gtctgcaacc
     4621 tggtcgattt catctaagaa tttttcgggc attgaaataa gtactcttga cataaattgt
     4681 tcctcctgtg gattttctac tctcttttgt tttgtttctc ttaatatctc tcgtacttat
     4741 ataaacaatt tttagaaata aaaattgcgt cttttttata tatttcttat attttactta
     4801 acaaaagtta acattaaaaa tgcaaaagct tattattact acgtttaatc cgctttgaaa
     4861 attaattatg aaataaaaca attggttgca gtatgtataa attcaataat ttgtgaaaaa
     4921 taatcgagcg aagatgcacc gttaataata nnatcagcct ctgattttga aggtcttata
     4981 tatttttcgg cagcatcacc aacataatcc cagtgtttca aggcattttc ttcagattga
     5041 ttgcgtttag atgcgcgttc cataaaccat tttttttgga ttttagggtc aatatcaata
     5101 taaattttta catcaaacag gtctttgata tccttgtaca tagcagccat tccctctaca
     5161 agaataaatt tttccgcaga aataggaata gaattaggaa cactaacacc tgttccgtta
     5221 ataagatact ccggtgcttt gatattttct ccgtttgaaa gctttgtcaa atcttccttt
     5281 aaaagnnnnc tggaaacttt caggagaatc tacatcgtaa ccgttatcac gcaaggcatc
     5341 gaacgtacca tactttgcta taaggtctga tatatcgtta aaatagttat caatacttaa
     5401 aaactcaaga ggaaagtcca aatctgtgct tgtttttttt atttgtttgc aaattgtggt
     5461 tttaccgctt gcagattctc cggttacgcc aatcaaaaac tttttatttg gattttcaat
     5521 caaacgtctt gaaaatttag aaatgaaatt ggnnattaat ttctttaaaa atcggacgtt
     5581 cagttttttt atcataagac aatatttgtt taaatttggt ttgcaagtaa aaagcaagaa
     5641 actctctgcc tgtttttgtt gaaaaatcag gtttaattat cttatcttta gagttatttt
     5701 ctttgtcaat taacatttgc ataccatacc aatacttctc aattaaaaaa tttgttagtt
     5761 tttataaaaa gtttaataaa tanntataca tccggcaaat cacccataac aactgcagtt
     5821 tctttagaat cgagatggaa tgcagtatga agagccttga tagctgcatc agactgttct
     5881 ttttcaacaa gacaacttat tttaatttca cttgttgaaa tcattttgat atttattccg
     5941 ctttctgcca gtgctttaaa cattgaagca gcaataccag gac
//
LOCUS       DABS01000150            5336 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13286, whole genome shotgun sequence.
ACCESSION   DABS01000150 DABS01000000
VERSION     DABS01000150.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5336)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5336)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5336
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..949
                     /locus_tag="CPT85_06650"
     CDS             <1..949
                     /locus_tag="CPT85_06650"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22227.1"
                     /translation="ESTSKLLNSKNPLAKKVLSVKAAIALCALFIPLTEFTLNYFKNL
                     MTLKVFKKGDFNNIASLDNKKEDKKLHEHIKKNAYKNIKRAAAALAASVGLGILIAKK
                     GANSKTLQHISEAVLEPGTKFFKKNEKAKNFFNKYFSLDHDVENGKLVLSKGQLTSCV
                     LIGMGGYFGAAKDRGKQNFLETLFRLPVVGFYIITGSELFEKGFKKLLKKSGKCKETI
                     GKNLEVPSFDKLETMAKELAKKNNTKAEAEFKKLAKQKVLISGVPFLFSIGFMGFFVA
                     GISNLFTKYRYNRDKKVNAMSQQFLMDKNRVQTYKTFFC"
     gene            1040..2515
                     /locus_tag="CPT85_06655"
     CDS             1040..2515
                     /locus_tag="CPT85_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008537967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose-6-phosphate hydrolase"
                     /protein_id="DAB22229.1"
                     /translation="MFLAMQISAVAHEITKSAYYPSFHFAAPANWINDPNGLVFFKGE
                     YHLFYQHNPQKPEWGPMHWGHAVSPDMVNWRHLPVALAPSKPYDKDGVWSGSAIVEDD
                     LLYLLYTGNAQIKNNDKTEVHQTQNLAMSKDGINFGKSANNPVIKMAPHYSNYVFSSE
                     NFRDPFVWKQDNSYFALVGTQYEKTKDGAVLLFKSKDLRNWVFINITAIGSKGEMGYM
                     WECPNFVHIGGEDVLMISPQGIKPHGKMFLNKYQSGWFVGKLDYNTGKFKQKGPFGLF
                     DHGFDFYAPQVMKTPDGRSVIIGWLDMWDTKMPEKADQWAGMMSIPRELKVVNGKVIT
                     TPVTELKSMRYDKVSYTNQAFNGEKAFNNVRGDVYELETEIDMTKAQSLCIKLRFSPS
                     QETVLSYDKNSKILKLNRDKSGQALTGEREVTLPLTDNLLKLRIFSDKSSLEIFANDG
                     QAVMSSRIYPDKNATGIKFIAQSEAKINYLNFYKLKSIHEK"
     gene            2526..2598
                     /locus_tag="CPT85_06660"
     tRNA            2526..2598
                     /locus_tag="CPT85_06660"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:2559..2561,aa:Thr,seq:cgt)
     gene            2798..>5336
                     /locus_tag="CPT85_06665"
     CDS             2798..>5336
                     /locus_tag="CPT85_06665"
                     /inference="COORDINATES: protein motif:HMM:PF03109.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22228.1"
                     /translation="MGSLINDVYRLQNANNQAQAAVAKTPAGDTKNINRPDFKDEFLK
                     QHRKNGLIERFYNFLKNSTNFGTGSKKVLESIKLNEEGKRTDEQVKSDIQKYRISQKT
                     SQQLLGDTLSAVAGMSVYSAINNNIKKEVALRKTGGSFIKFLLESKTDNKKIDAIINN
                     LQEISPTKRIGVTVGAAIFTGMFVKKLAMSINRIGSKEFKSQKKKSEQTKQERKLERK
                     QLRKAKRKEGFKNIATGALNGALAPLIGVAGGIVGIPAFIAINLATRYLSSQKGDDKA
                     SLKDFAQKFKDNAVLNSAFIALTALPLAKKASYNKVLTENLNKVASKLKKTNLSQPYK
                     EHKTAYQQLEESLLKSDNINNILSDPLLPVAEQIKQLTKENIFAVKFIQISDHFGLLS
                     TTLRENCPTSRTIEQAKDIVAKTYGNRFQLSKQLGVGTIAETYLAKDAETGKEVCIKI
                     LKDGITAAKIDADKQKMINIIKSTVKNQKEQEYLIKNIEDLASGIRKEVDFANEMESA
                     QKLAKITKEAFVVKPMEVKDNIYVMEKANGISLKTLEDVVYLEAEKKNIVAYDKKYGK
                     TTNIERLKDIDEKIEEIKKKSPDFAELNITHEEINKILSNYIKVVTEQFDSIYKNGKT
                     LHADIHPGNVFVDIKALKEGKNKVITLIDTGNTVDITMEQSKTALKLSQYIKNGNIKD
                     LSSYIMEGAILPEGMTKQQSIEIMESELKKMFFDTKTKINYMNNNEFFILTSNIMREH
                     NIIPSTTQLNLEKAKHSAMKSANAVIESLMESKYAGITELSPLVLIKISSDVTSWMRR
                     LIVAKKMQDVKNLSQFSLSEVIKNRHNPNMLKTNSEEHLIYQFKQNLE"
BASE COUNT         2059 a          923 c          956 g         1398 t
ORIGIN      
        1 tgaatcgacc tcaaaacttt taaattcaaa aaatccgctt gcaaaaaaag ttctttccgt
       61 aaaagcagct attgctttgt gtgctttatt tattcctttg accgaattca cactgaatta
      121 ttttaaaaac cttatgacac taaaggtttt taaaaaaggt gattttaaca atatagccag
      181 cctcgataac aaaaaagaag ataaaaaact gcacgaacat attaaaaaaa atgcatacaa
      241 aaatataaaa agagccgcag ctgcattagc tgcaagcgta gggcttggta tattgattgc
      301 aaaaaaaggt gcaaattcta aaaccttaca acacattagt gaagctgttc ttgagcctgg
      361 aacaaaattc tttaaaaaga acgaaaaagc caaaaacttt tttaacaaat acttttcact
      421 tgaccatgat gtggaaaacg ggaaactcgt tttgagcaaa gggcagctga cttcgtgcgt
      481 gcttattggc atgggcggat actttggtgc tgcaaaagac agaggcaaac aaaattttct
      541 cgagaccctt tttagacttc cggttgttgg tttttacata atcacaggtt cagagctttt
      601 tgaaaaaggt tttaaaaaat tactgaaaaa atcgggaaaa tgcaaagaaa caatagggaa
      661 aaatttagaa gttccatctt ttgataagct agaaacaatg gcaaaagagc tggctaaaaa
      721 aaataacaca aaggcagaag cagaatttaa aaaactggca aaacaaaaag tgctcatatc
      781 aggtgtaccg tttttgttca gcataggctt tatgggattt tttgttgctg gaatctccaa
      841 cctgtttaca aaatacagat acaatcgtga caagaaagta aatgcaatgt cacaacaatt
      901 tttgatggac aaaaaccgtg tacaaacata taagacattc ttttgttaat aagaataaat
      961 atgattgtgg tattatagtt acagtcaaaa aaacggagtt taatatatga aaaagttttc
     1021 tgctttcctc gctgtatcta tgtttttggc aatgcaaatc agcgctgttg cccatgaaat
     1081 tacaaaatca gcatattatc cgtcttttca ttttgctgca ccggcaaatt ggattaatga
     1141 ccccaatgga cttgtgtttt ttaaaggaga atatcacctg ttttatcagc acaatccaca
     1201 aaaacccgaa tggggcccta tgcattgggg gcatgcagta agccctgata tggttaactg
     1261 gcgtcatctg cctgttgcac ttgctccgtc aaagccgtat gacaaagacg gtgtatggtc
     1321 cggctctgca atagtagaag atgatttatt atacctttta tacacaggta acgcgcaaat
     1381 aaagaacaac gataaaacag aagtgcatca aacacagaac cttgctatga gcaaagatgg
     1441 aataaatttt ggcaaatcag ccaacaatcc tgttatcaaa atggctccgc attattccaa
     1501 ttatgttttt tcctctgaaa atttcagaga cccgtttgtg tggaagcaag ataatagtta
     1561 ttttgcactt gtcggcacac agtatgaaaa aacaaaagat ggtgctgttt tgttatttaa
     1621 aagcaaagat ttaagaaact gggtgtttat caacatcacg gcaataggct caaaaggcga
     1681 aatgggttat atgtgggaat gcccgaactt tgtccatata ggaggagaag atgttttaat
     1741 gatttcgcct caaggcataa aacctcatgg aaaaatgttt ctaaataaat atcaatccgg
     1801 ctggtttgta ggcaagcttg attataacac aggaaaattc aaacaaaagg ggccttttgg
     1861 cttgtttgac catggttttg atttttacgc gccacaggta atgaaaacac ctgacggcag
     1921 aagcgttata ataggctggc tggacatgtg ggatacaaaa atgccggaaa aagctgacca
     1981 atgggcagga atgatgagca taccaagaga gctcaaagtt gttaatggaa aagtcataac
     2041 aacacctgtc acagaattaa aaagtatgcg atatgacaaa gtctcttata caaatcaggc
     2101 ctttaacgga gaaaaagcct tcaacaacgt aagaggcgat gtctatgaat tggaaacaga
     2161 gattgatatg accaaggctc aaagcttgtg tataaaatta cgtttttctc cttcacaaga
     2221 aactgttttg agttatgata aaaatagcaa aatactgaaa ttgaaccgtg acaaatcagg
     2281 acaagctctc accggagaaa gagaagtcac actgccgtta accgacaatc ttcttaaatt
     2341 acgcattttc tctgacaaat cttctttgga aatttttgca aatgacggac aggcggttat
     2401 gagcagcaga atttatccgg ataaaaatgc aacgggtata aaattcattg cacagagcga
     2461 agcaaaaata aattatttaa atttttataa gttgaaatca attcacgaga aataaaatcc
     2521 aaaaagccgg tgtagctcag ctggtagagc aggtcattcg taatgatcag gtcgcaggtt
     2581 cgaaccccgt caccggcttt ttttactaag ctatttggct cacctgcgac ttttcgcagg
     2641 ctaatttaaa tcgcaggctt acgcccgctc agccccgtca ccggcttttt tactaacctt
     2701 tttgtaaaga aaatttcata attattgatt tgattgtcaa aaattattat ttagacgcat
     2761 tcgttcaaat atattggtcc aatataaggg aaaaagaatg ggaagtttaa ttaacgatgt
     2821 ttatagatta caaaatgcta ataatcaagc tcaggcagca gtagccaaaa cacccgcagg
     2881 cgacactaaa aatatcaata gacccgactt caaagatgaa tttttaaaac aacatcgcaa
     2941 aaacgggctg atagaaagat tttataactt cttaaaaaat tccacaaact ttggcacagg
     3001 ctcaaagaaa gttttagaga gcataaagct gaatgaagaa ggcaaaagaa cagacgagca
     3061 agttaaaagc gatatacaaa aatacagaat ttctcaaaaa acatcacaac agcttttagg
     3121 cgatacactt tctgccgttg caggcatgag cgtgtattct gcaatcaata ataatataaa
     3181 aaaagaagta gctctgagaa aaacaggcgg cagctttatt aagtttctcc ttgaaagcaa
     3241 aacagataac aaaaaaatag atgctattat aaacaatctc caagaaataa gtccgacaaa
     3301 acgtatcgga gtaacggtcg gagcagctat attcaccggc atgtttgtta aaaaattagc
     3361 aatgtctatc aaccgcattg gctcaaaaga gtttaaatct caaaagaaga agagtgaaca
     3421 aactaaacag gaaagaaagc ttgaaagaaa acaattaaga aaagctaaac gtaaagaagg
     3481 ttttaaaaat attgccacag gagccctaaa tggtgcatta gcaccgttaa tcggagttgc
     3541 tggaggtatc gtcggtatac ctgcgtttat tgcaatcaac cttgcaaccc gttatttatc
     3601 ttctcaaaaa ggtgatgata aggcttcatt aaaagatttt gctcaaaaat ttaaagataa
     3661 tgctgtatta aactctgcat ttattgcgtt aacagctctt ccgctggcaa aaaaagcaag
     3721 ctataacaaa gtgctaaccg aaaacctaaa caaagtggca tcaaaactca aaaaaacaaa
     3781 cctttcacaa ccttacaaag agcataaaac agcatatcag cagcttgaag aaagcctttt
     3841 aaaatctgac aatataaaca atatactttc tgatccacta cttcctgttg ctgagcaaat
     3901 caaacaatta acaaaagaaa atattttcgc tgttaaattc atacagatat cagatcactt
     3961 tggcttacta tcaacaactt taagagaaaa ctgcccgaca agcagaacaa tcgaacaggc
     4021 aaaagatatt gtagccaaaa cttacggaaa cagattccag ctatcaaaac aacttggagt
     4081 aggtactatt gcagaaacat accttgccaa agatgctgaa acaggcaaag aagtatgtat
     4141 aaaaatctta aaagacggta ttacagctgc caaaatagat gctgacaagc aaaaaatgat
     4201 taatataata aaatcaacag taaaaaatca aaaagaacag gaatacttaa ttaaaaacat
     4261 agaagatctt gcctctggca tacgcaaaga agtagatttt gccaatgaaa tggaatcagc
     4321 acaaaagctg gccaaaataa caaaagaagc ctttgtggtc aagcctatgg aagttaagga
     4381 taatatttat gtaatggaaa aagctaacgg aataagcttg aaaacattag aagatgtagt
     4441 ttatcttgaa gctgaaaaga aaaatatagt cgcttatgac aagaaatatg gaaaaactac
     4501 caatattgaa cgtttaaaag atattgatga gaaaattgaa gaaatcaaaa agaaatctcc
     4561 tgattttgca gagctcaata tcacacatga agaaataaat aaaattcttt ctaattatat
     4621 aaaagttgtc acagagcaat ttgacagcat ttataaaaac ggaaagacac ttcacgcaga
     4681 tattcaccct ggcaacgtat ttgtggacat taaagcgctt aaagaaggta aaaacaaagt
     4741 tatcaccctg atagatacag gcaacactgt tgatataaca atggagcaat caaaaaccgc
     4801 attaaaactt tcacaatata tcaaaaacgg caacatcaaa gatctgtctt cttatatcat
     4861 ggaaggtgca atattgcccg aaggaatgac aaaacaacaa tccattgaaa ttatggaatc
     4921 agagcttaag aaaatgttct ttgatacaaa aacaaaaatc aattatatga ataataatga
     4981 gttctttata ttaacatcaa atataatgag agaacacaat atcataccgt ccacaacaca
     5041 gctgaatctg gaaaaagcca aacattccgc aatgaaatca gcaaatgctg tgattgaatc
     5101 acttatggaa tcaaaatatg caggtattac agaactttct cctttggtct taataaaaat
     5161 ttccagtgat gttacaagct ggatgagacg attgatagtt gcaaagaaaa tgcaggatgt
     5221 taaaaatctg tcacaatttt cactaagcga agtcataaaa aacagacaca accctaacat
     5281 gctaaaaaca aacagcgaag agcatcttat atatcaattt aaacagaatc ttgaaa
//
LOCUS       DABS01000151            3892 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_11011, whole genome shotgun sequence.
ACCESSION   DABS01000151 DABS01000000
VERSION     DABS01000151.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3892)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3892)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3892
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            247..1542
                     /gene="secD"
                     /locus_tag="CPT85_06670"
     CDS             247..1542
                     /gene="secD"
                     /locus_tag="CPT85_06670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012938865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="DAB22216.1"
                     /translation="MKNKKLMFWMIIALVIAAAVVIIKKPTKLGLDLVGGSRIVLEAQ
                     TTDTIAKITPDMMSSLQFAIENRVNALGVAETVVQQTGEKRLLVEIPNISDPAKAKEF
                     LGETAELEFKKPLDNQYGATGWAPTGLTGKDVKKALISTNPGGQWVVSLEFNDKGTKK
                     FGQLTQELVGXFFNGDMQSAPVIQEPILGGHAQISGGDSGFAYEEAKKMVDLLNAGAL
                     PVPAKIIEESLVGPTLGADSIAKSKTAGIIGIGLVMIFMLLYYRLPGAIADVALIIYS
                     LLVFAVFKIVPVTLTLAGIAGFILSIGMAVDANILIFERTKEELKAGRTLFTAINAGF
                     DRAFTSIFDSNMTTIITCVILYFLGTSIIKGFALTLIIGVLISMFTAITVTKNFMHLL
                     FGAGQLKHPGWFGIKQSEIGKAYEATETKKEKAKFGILD"
     assembly_gap    757..758
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1647..2636
                     /gene="secF"
                     /locus_tag="CPT85_06675"
     CDS             1647..2636
                     /gene="secF"
                     /locus_tag="CPT85_06675"
                     /inference="COORDINATES: protein motif:HMM:TIGR00966"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="DAB22217.1"
                     /translation="MSETVLHQHKWIDVVKYRWVWFGLSLLLVIPGLIAMGYLMINSP
                     QHLPVKVGIDFTGGTITQYSVTKDVSNNDVAKIRENLVKAGIENPVIQVLRTNNTISK
                     AENIAPATVLSVKTAFKSNDKTSEQKIASVVKSDYPSAQLVQVSSIGPSLGKELFINS
                     LYALGLAFLGIVIYLSFRFQLDYAVIALISLAHDALFVLGFFAILGIFFDVHIDALFI
                     TAVLTVIGFSNHDTIVVFDRIRENCRFLAKKATFPEIVNASVNQTLARSINTSLTTLI
                     TLSALYLFGGETTKEFVLAMIVGIAIGTYSSIFFASTLLDWWRERKEAKGAKA"
     gene            2638..3057
                     /locus_tag="CPT85_06680"
     CDS             2638..3057
                     /locus_tag="CPT85_06680"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="DAB22218.1"
                     /translation="MTQEKALAQFVSELREKLGLSQTGLAKKSALPLKTIEDIESGQE
                     LFLASTIRQKLANGLKLKPADIKQYEKHPNLSLLPDNEATLFIKNQILAHDVADLTCP
                     VCGSKLITRIAKMYDLEDNLILVPKARCEKCPFQIKG"
     gene            complement(3047..>3892)
                     /locus_tag="CPT85_06685"
     CDS             complement(3047..>3892)
                     /locus_tag="CPT85_06685"
                     /inference="COORDINATES: protein motif:HMM:PF01966.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22219.1"
                     /translation="ERVNLELIKLFGGQNAVEALHSLNDFSLLEILIPEVAEMKKVPK
                     NSHHHLDLIEHSIETVKQVQCFYDKAAKEVKDHCDKEFFCGQKRLAYLKLAAFLHDVG
                     KPSTWQIEPSSGRHRFIMHDSEGAKLIVPTLKNLKFSKKQIAYLQKMIKNHIYPSGVV
                     TSDDSSEKAYLRFYRKMEDEVIDLIALAYADRLSALGPDITQEMIDKNLNGLDNLLKG
                     YFEQKNKLAPLPKLLDGKEIMEILQIPASPVLGQIIHKLQEAQIASEVNTKDEAIAFI
                     KKITL"
BASE COUNT         1228 a          693 c          772 g         1197 t
ORIGIN      
        1 tgtaatgaag agttatcgtt taagaatatt tgttttgaat ttgtaatttt catagcaatt
       61 ttacagttta tatattatgt ttatcggcaa attttattta atttttagta agtataaaaa
      121 attcgttaca aagattaata tccaagcagg ctatttatgg atttttttac atttataatc
      181 gtttttttgc tacaattgtg ctgtaaattt gaaacattat tttaaggggt atagagaggc
      241 aaaaaaatga aaaacaagaa attaatgttt tggatgatta ttgcgctcgt aatagcagca
      301 gctgttgtaa tcatcaaaaa gcctacaaaa ctcggtttag accttgtggg cggttcacgt
      361 atcgtgctgg aagcacaaac aacagacaca attgcaaaaa tcacacctga tatgatgagc
      421 agtttgcaat ttgcaataga aaacagagta aacgcactcg gtgttgcgga aacagttgtg
      481 cagcaaacag gtgaaaaaag acttctggta gaaattccaa acatttctga ccctgctaag
      541 gccaaagaat tcttgggcga aacagcagaa ttggaattta aaaaaccttt agacaatcag
      601 tacggagcaa caggctgggc gcctacaggc cttaccggta aagatgtaaa aaaagcatta
      661 atttctacga atcccggcgg acagtgggtt gtatctcttg aatttaatga caaaggtaca
      721 aaaaaattcg gccagctgac acaggaattg gtcggannat tctttaacgg agatatgcag
      781 tctgcgcctg taatccaaga gcctatttta ggcggccatg ctcaaatttc aggcggggat
      841 tcaggttttg cttatgaaga agcaaagaaa atggttgacc ttctcaatgc aggtgcattg
      901 cctgtgccgg ccaaaattat tgaagaaagt ttagtaggac cgacactcgg tgcggatagt
      961 attgcaaaaa gtaaaaccgc aggtattata ggcataggcc ttgtaatgat atttatgctt
     1021 ttatattacc gtttgcccgg tgctattgca gacgttgcat tgattattta ttctttgctt
     1081 gtttttgcag tattcaagat tgttcctgta acacttacac ttgcgggcat tgcaggtttt
     1141 atactcagta tcggtatggc tgttgatgca aatatcctta tctttgaaag aacaaaagaa
     1201 gagctaaaag caggcagaac attgtttaca gcaatcaatg cgggttttga cagagcattt
     1261 acgtcaattt ttgactctaa tatgacaact atcattacct gtgtaatttt gtatttctta
     1321 ggaacaagca ttatcaaagg ttttgccctt acattgatta tcggtgtatt gataagtatg
     1381 tttactgcaa taacagttac aaaaaacttc atgcacctgt tatttggtgc cggacagctt
     1441 aaacatcccg gttggtttgg tattaaacaa tctgaaatcg gtaaggctta tgaagctact
     1501 gaaactaaga aagaaaaagc aaaattcggt atattggact agtggatttt ttcgggcacg
     1561 aagctgctca tgtggagccg gacgttactc cggcggaacg gaaataatcc aagacaatac
     1621 taaacaaatt taaggagaca atataaatga gtgaaacagt tttacatcaa cacaaatgga
     1681 ttgatgtcgt aaaatacaga tgggtatggt ttggcctgtc attattgtta gttattccgg
     1741 gcctgattgc aatgggatat ctaatgatta actcgcctca acatttacct gttaaagtgg
     1801 gtattgattt tacaggcggt acaatcacac aatattctgt aaccaaagac gtatctaata
     1861 atgacgttgc aaaaatcaga gaaaaccttg taaaagcagg aatcgaaaac cctgtgattc
     1921 aggttctaag aacaaataac acaatctcca aagcagagaa tattgcaccc gcaactgtat
     1981 tatctgtgaa aacagcattt aaaagtaatg acaaaacctc tgaacaaaaa attgcttcgg
     2041 tagtaaaatc tgattatccg tctgcacagc ttgtgcaggt aagctctata ggcccttctt
     2101 tgggtaaaga attatttatc aattctttat atgcattggg acttgctttt ttaggaattg
     2161 ttatatatct ttccttcaga ttccagttgg attatgcagt gattgcgctt atatcgcttg
     2221 ctcacgatgc attatttgtg ctcggatttt ttgcaatact tggcatattc tttgatgtac
     2281 atatcgacgc attatttatt acagcagttt tgacagttat tggtttttca aaccacgaca
     2341 caatcgttgt ttttgacaga ataagagaaa attgcagatt ccttgcaaaa aaagctacct
     2401 tcccggaaat tgtcaatgcc agtgtaaacc aaactctggc aagaagtatc aatacttcat
     2461 taacaacatt aatcactctc agtgcattgt atcttttcgg tggagaaaca actaaagaat
     2521 tcgtacttgc aatgattgta ggtattgcaa tcggtactta ttcaagtatt ttctttgcgt
     2581 ccacactgct tgactggtgg agagaaagaa aagaagcaaa aggggctaaa gcttaagatg
     2641 acacaagaaa aagccttggc gcaatttgtt tcggaattaa gagaaaaact gggtttatca
     2701 cagacagggc tggcaaaaaa gtcagctctg cctttaaaaa ccatagaaga tattgaatca
     2761 ggtcaggagc tgtttcttgc ttcaacaatt cgtcaaaagc tggccaacgg attaaaactc
     2821 aaacccgctg atattaaaca gtatgaaaaa cacccaaatt tatcattgct gcctgacaac
     2881 gaggcaactc tgttcataaa aaaccagatt ttagcgcacg atgttgcaga cctaacttgc
     2941 cctgtctgcg ggtctaagct aattacaaga atagcaaaaa tgtatgacct tgaagacaat
     3001 ctcatacttg tgcccaaagc aagatgcgaa aaatgcccgt tccagattaa agggtaatct
     3061 tttttataaa tgctattgct tcatcttttg tattcacttc agaagctatc tgggcttctt
     3121 gtagtttgtg aataatctgc ccgagcacag gagatgccgg aatttgaagt atttccataa
     3181 tttccttgcc atcgagcagc tttggtaaag gtgcgagttt gtttttttgc tcaaaatagc
     3241 cttttaaaag gttatcaagg ccgtttaggt tcttatctat catttcttga gtaatatccg
     3301 gccccagcgc tgacaaacgg tcggcatatg ccagagcaat aaggtctatc acctcatctt
     3361 ccatctttct gtaaaaacga agataggcct tttcagagct gtcatcagac gtgacaacac
     3421 ctgagggata gatatggttt tttatcattt tttgcaaata agctatctgt tttttagaaa
     3481 acttgagatt ttttaaagta ggaacaatta actttgctcc ctcgctgtcg tgcatgataa
     3541 atctgtgacg gccggaagaa ggttctattt gccatgtgga gggtttgcct acgtcatgta
     3601 aaaaagcagc cagtttgagg tacgcaagcc ttttttgtcc gcaaaaaaac tctttatcac
     3661 agtggtcttt tacttccttt gctgccttgt cataaaaaca ttgaacctgt ttaaccgttt
     3721 ctatggaatg ttcaattaaa tcaaggtgat gatgggagtt tttcggcact tttttcattt
     3781 cagctacttc aggaatcaat atttcaagaa gagaaaaatc attcaaagaa tgtagcgcct
     3841 ccactgcatt ttgaccgcca aagagcttta taagttctaa attaacacgt tc
//
LOCUS       DABS01000152           16448 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_20548, whole genome shotgun sequence.
ACCESSION   DABS01000152 DABS01000000
VERSION     DABS01000152.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 16448)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 16448)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16448
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            11..931
                     /locus_tag="CPT85_06690"
     CDS             11..931
                     /locus_tag="CPT85_06690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007309635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylpyrophosphate synthetase"
                     /protein_id="DAB22161.1"
                     /translation="MAEEIASYLGTSVGPMIIKNFADGEIYVQVQQSIRGDDVFLIQP
                     LSNPVNENLMELLIMIDAFKRASAKSITAVIPYYGYARQDRKTSGREAITAKLVADLL
                     TTAGADRILAMDLHTGQIQGFFNILVDHIYATPVLTDYIRKLNIPADKLVAVSPDTGG
                     VQRTRVFAKQLDCPLAIVDKRRDKHNEAIADHIIGDVKDKICVLVDDMIDTAGTICEA
                     SKLLIKEGAQKVYVCAAHGILSGPAIQRLEEAPVEEVIITNSIPLDREVSSKFTQLSI
                     APILGEAISRIHDNESVSSLFGFEKEYKSY"
     gene            complement(1026..2366)
                     /locus_tag="CPT85_06695"
     CDS             complement(1026..2366)
                     /locus_tag="CPT85_06695"
                     /inference="COORDINATES: protein motif:HMM:PF06429.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22149.1"
                     /translation="MTQAFYTAIGGMAAGQTKISVVADNIANMNTIGFKASNVNFSDV
                     YYRTSSTGQAPTGQMGGINPKQTGIGVQTASITRDFSAGTTLTTGLNTDLCINGSSFF
                     TVASPTVEILYTRDGNFTVDADGHMVTSSGYKLLGTNNSLNTTSSTIPIKIPTYIDTV
                     TTPATQAQMANKALDELNGIKSGGVKDGSFIITTFDQAGTPTEKTINVTSDMTVNQLL
                     DAINNAGDVQASIVDGTVSIKADGVDRFEVKNGTSNIVTQLGIGKMDPTTQVASSEVI
                     NYHQTIGEGNMGSDNSKNFTSVTINENGLIEVKYGNNDTLSVMQDPSDPSKMILKYTL
                     NDGTIITGSDLTVNDQLVEPANLQIQMASFVNPQGLTAQGNNTYATGPNSGMVLYGSI
                     SSTAFGNVKSGVLEGSNVDLASEFADMVVSQRAIEANSRVFTTTNEILQTLXGR"
     assembly_gap    1036..1037
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2412..3221)
                     /locus_tag="CPT85_06700"
     CDS             complement(2412..3221)
                     /locus_tag="CPT85_06700"
                     /inference="COORDINATES: protein motif:HMM:PF03963.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22150.1"
                     /translation="MASLGSIQQELVNMQSNTAVNKAKEQAANGASQELDGDAFLMLM
                     LEQLKNQDPMDPMDNSEMLAQQAQFTQLTELQKLNESISTNNMIQQANDLVGKTVQIV
                     DPNNTSRLITGVVSSANFTNGSATVTVNGKDYPLGLVAAITDGAPATDDKTIGDKKLS
                     ELNGASGITEGYVTLTTQDDGYKKNHTYIKITSDMTVNDFMKELEKAGVKTKLENGIL
                     TIEKGDFKGISMSEGKVGDDTATASNLLQKMEMFQSETGDLETGILDYNRK"
     gene            complement(3245..5293)
                     /locus_tag="CPT85_06705"
     CDS             complement(3245..5293)
                     /locus_tag="CPT85_06705"
                     /inference="COORDINATES: protein motif:HMM:PF02120.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22151.1"
                     /translation="MTSQYTQTSQILPSQLMANAFSSKSQNYANVSSEAFSSVLDNAS
                     KSYSYADKSTNLSSTANDYAQKTKDLNSQKTEVKKDNNDNSNKIKDKETSDKIDEKDS
                     LKSDDKNKTDKSDYAEKNDNTHKADKEDKADKKDNTQTSEQEKDNDVKSESNTQEASD
                     KDIKNNAQSELQNQTTQVLNAQQAALASMEVSAEATTAISAQTTAQTDVQQDSENTVT
                     AAAKTTEAVIDTQNSKDSVNTIVNEQILSNIEYEDLSAVDTELKKAGIDAETLKKIVE
                     QAKNTQNSDTAEIVQDVPSQEKTDVKLADTLKTAQTVKDVAENINTQVSSEAAEVKAE
                     VKNNTALEKEAQTLPLKTAKDNLAADTSRLTANIEQAETAQNAVPAPVTPADTKAEES
                     PVIKVTQEVASQLKDNVEQNTSQNIENKDTTSKTKDKAVEQMTKLQDTDTVVTEARTQ
                     ADNSNSNSNGGNSNGSTNMQQGTAGELAAKLSVDAAPTNTSGAEAFVNKLDAQLSAKG
                     ASATARTTTLNQSDIMSQVNAKFEELQKSGNNKVSIILQPENLGKVSVEIMNSKDGIV
                     AKMTTDSQQVKELFDKNVEALKSNLSSQGVNVNNIKVECSQESANHAMNFEQQQFNQS
                     FNGQQNSHNQANQSHQQSNSAYESSYETSSQEAEPNQGVEIKNTDTLIKHNGKVDYSV
                     "
     gene            complement(5356..5802)
                     /gene="fliJ"
                     /locus_tag="CPT85_06710"
     CDS             complement(5356..5802)
                     /gene="fliJ"
                     /locus_tag="CPT85_06710"
                     /inference="COORDINATES: protein motif:HMM:TIGR02473"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export protein FliJ"
                     /protein_id="DAB22152.1"
                     /translation="MKKFQFRLQVVLDIKEKLLEQKLLELSKVQRGLQDAVNKQKTLE
                     GYQAEINEALLNVFQSGNELDLVEVQRYKDFINKLIVDISNQKVVVQNITKLLDIKRK
                     EVNDVLKEKKVLEKLKENQKKKFYQEFEAYERNELDDIASSRYARF"
     gene            5997..6893
                     /gene="ispH"
                     /locus_tag="CPT85_06715"
     CDS             5997..6893
                     /gene="ispH"
                     /locus_tag="CPT85_06715"
                     /inference="COORDINATES: protein motif:HMM:TIGR00216"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="DAB22153.1"
                     /translation="MSLKDWMYLHLKKNIKLAKHAGFCYGVKRAVETTKKLKNENPDK
                     EIFVLGELIHNSHVINELSGLGIHTVDELPCSKTGVCVIRSHGAAPEVFENAKAKGYD
                     VVDLTCFDVKKVQQKAIQLVQEGFLLVIVGKPEHPEVCAIKANAQPHGEHVIVAPDTE
                     SLKEFEEEIIKHKRVGVVVQTTQRIENLKSVVNYLLPLAKEVKVFNTICASTSLRQSE
                     AKSLALESDLMVVVGSKKSANTTHLAEILSGITSTIHIETDEELKNYDSLIKNAQNIG
                     VTAGASTPDAIIENVINKLNNY"
     gene            6913..7962
                     /gene="rpsA"
                     /locus_tag="CPT85_06720"
     CDS             6913..7962
                     /gene="rpsA"
                     /locus_tag="CPT85_06720"
                     /inference="COORDINATES: protein motif:HMM:PF00575.21"
                     /note="in Escherichia coli this protein is involved in
                     binding to the leader sequence of mRNAs and is itself
                     bound to the 30S subunit; autoregulates expression via a
                     C-terminal domain; in most gram negative organisms this
                     protein is composed of 6 repeats of the S1 domain while in
                     gram positive there are 4 repeats; the S1 nucleic
                     acid-binding domain is found associated with other
                     proteins; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="DAB22154.1"
                     /translation="MTTQMDEFERLLEESFKSKLSVADVVRGQLVKKENDGYLVDIGS
                     KSEGFLPNREIPTSMVDDMKIGDCKEFYILKEDEDEKSGMLLSLKRVACAQAWQTLQN
                     AKITGETVTAKVVSLVKGGVIVEVNDLRGFIPASQLRTGMPFDGLMNQEIEVKVLEAD
                     AKRNKLILSQRQALAEQREQLVDEVISNLEVDQTVEGEVVRIADFGAFIDINGVDGLL
                     PISEISWQRIKHPSDVLTLGQKIEVKVLKIDEDLKRISLSLKRIGDNPWEEIEDKFEE
                     GQVITGTVNKVTSFGAFINIFPGVEALLPVAEMEDSNANPFDIYKNGDEVKVLIKKFT
                     PQEHRIALSVKDMNN"
     gene            complement(8041..10464)
                     /locus_tag="CPT85_06725"
     CDS             complement(8041..10464)
                     /locus_tag="CPT85_06725"
                     /inference="COORDINATES: protein motif:HMM:TIGR00361"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="DAB22155.1"
                     /translation="MNGIILFSTFYILGIVGFFTNTIPLVALLLLVVAIIFLFNEKIS
                     CKGAVLYYLAFALAICNCHFQIKNYDGLSAFIPSDAAITGTVETIPTTNVPVRTKFYL
                     KAQSGEFDGVKVPKLDGRTIVTLYDTPQNISRIKISDKIQLKGKLRSPFSAKNPCQFD
                     YANYLKNKKTFSTFYVQEGDWKIVSQPESFGSKFLQKLNDTRTRILNHQKKYMKSPNI
                     EVLGGIVFGDDAINPPDLIKTSFINSGLLHILAASGMNVSIIFGIWYFIGTRLRLNYR
                     FVILVGAVLVGFYTLVTGMGPSVLRAALMIEFVILGKLIDRAADSIALIFLVALLLLL
                     YDPAMINDVGFQLSFVVTFALIYCVPPILDRIKNKPANFLAGAMLIPFVAQLWAAPIQ
                     MFYFNNFATYSVLANLAITPFIMLISFGGFLGSILAMIPVDFIADKVCLVFAFVLNPV
                     VSFLVSISHFFAGLPNSLLTTIHPHSAQMILYYGALLLLARSMRCGFKEKKSLVASVI
                     LGIVLTISLLLPVVKPLLSPVSKDCEIIVFDVGNADSFLIKTPKNKYIMIDTAHGIFK
                     GSKATFSQANAIMGKYLKDKGIKELELMILTHFDADHSGGAVDIMKTANVKRLVLSKD
                     KDDSKTTKAIMEYVKENKVNTTDAKNNEVVHSEKGLTLTTFTPDFTHNKNDNDNSTIS
                     VLSFGDFDMLFMADGGVRSFNKIKKDLNKTEIEVLKSGHHGAKNTVTSKMLNTIHAQN
                     VVISTGVNPYGHPTKQTLKTLRKNNVRTYRTDVDNAMKITTDGKTYKIYRYNPEKRRF
                     EKDIENPCK"
     gene            complement(10536..10910)
                     /locus_tag="CPT85_06730"
     CDS             complement(10536..10910)
                     /locus_tag="CPT85_06730"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22156.1"
                     /translation="MTSPKIGQTISNVTDNIRNGYQTRVKPKIASGYQYTTELKNDVV
                     DFVKKNPKKTGAAAFLTFVGLAAAGFVAKHIKTLHDMNKIKSEHIEHQREIIDALKDD
                     IADKQFMLDTRQDIIDAYSKKK"
     assembly_gap    11151..11164
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            11281..12549
                     /locus_tag="CPT85_06735"
     CDS             11281..12549
                     /locus_tag="CPT85_06735"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22157.1"
                     /translation="MGDSVSFSSQKAEVDLDVNSSSQKGETKEERISIAEGKVSKSTT
                     SATNADNNVSSAESAESQAKSAYLEADDKANAAEDTFNQAEVKTTQAKEKSQAADKKE
                     QAAQTKEQEAQTAEETAAKQVTTCESQLQKAQAQVQTAQASVNSAESAVEQAQAAVNS
                     AATPAAKAAATAALAAAKAKLAAAKAELAKAQAQERAAQTALDNAKQQHEQAKTELNT
                     AKEEHTQASKDAQTAKKEYEQAKSESDKAKETFTSLRQTADAKKADWQTASEEIRAAK
                     ETKEAAKQQLDEAQKELDAAKAGEKEPSKLEKISKTAGLAQQGIGAISGLAQTFGNLK
                     GSSDASSSGSTPMPAALSASLNATLASTRNYINQGDKAGWDNLFMAGNTTKSPQVANN
                     TTATNNIQTAANSTANSSAQSNNIFKLKLA"
     gene            complement(12616..13836)
                     /locus_tag="CPT85_06740"
     CDS             complement(12616..13836)
                     /locus_tag="CPT85_06740"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22158.1"
                     /translation="MSLTVNGVNKNQTSQPTAASTAPAQETQNLFGSEETSKTEKADT
                     AAQKTLLEAELAKLEQQLAQLESKKSEKEAYKKELEAQKKSITNQKANVEAQIKANEA
                     EMKSNEEEIAKNEQNIEKAQDEIEKLQKEYDEKNKEANELSQQISDKIAKIVSDSDNN
                     VKNQQGQIQQAYQEAYAKVESGEIEQNEVAQYVMQKVGNGNVNVATEELTAINSLNAQ
                     VKALISGANTLSEQMSLKQTEIEGYQAAITASVAANEALIEKNAPLKAQIADFNKQIN
                     TVNNEINTTDREINTIDKNIAKVNTNIQTTQNQINTIDGKETTEVKVEEVADINTTIA
                     NNNVDTNYGETAKSETKSNPFLAVSYDFGSYATMTEALEAMSKNNEQNIASARTQTES
                     NRQEVRKMFQELIG"
     gene            complement(13975..15426)
                     /locus_tag="CPT85_06745"
     CDS             complement(13975..15426)
                     /locus_tag="CPT85_06745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015163677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="DAB22159.1"
                     /translation="MVSQAVRDKYEVVIGLEVHAQLKTKSKIFAPDSTEFGAEPNSHT
                     STITLGMPGVLPVLNKECVNMGILLGLALNCEIPARCKFDRKQYFYPDLPKGYQISQY
                     DQPICINGHIDINGKRIGITRAHLEEDAGKLVHAGADGLAGSLYSLVDLNRAGTPLLE
                     IVSEPDMRSSEEARAYMEELRNIVRYIGVCDGNLEEGSMRCDANISVMPKGSDKFGTR
                     AEIKNINSFSALQRAIEYEIDRQIEIVEDGGEVDQETRLWDDNQKVTKTMRSKEDAND
                     YRYFPEPDLMPVEISREWVEEVRAKMPELPEAKRKRYEGLGLSAYDANVMVDQMETAL
                     FYDEVLKLGADYRTANNLLVGDITAYLKENNININETKLTPKALAELVDLITKGTISN
                     NIAKKILPQMLETGAQPKEIVEKEGLSVISDEGAIKELVQKVVANNPAQVQAYKGGKT
                     NLMGFFVGQIMKETKGRANPQVINKLLSEELNK"
     gene            complement(15487..16032)
                     /locus_tag="CPT85_06750"
     CDS             complement(15487..16032)
                     /locus_tag="CPT85_06750"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22160.1"
                     /translation="MKVQNVFSTGLNYPQKNSSFGAKIVSKPGDDFSGLIDYASQDDK
                     TTKELMVALKMLDHKNRDAVLGYSESRDGEIYIENLRNGQRVTKINDYNSINMRDNFK
                     SFLKFASPFDEQHQRLLGQGMNRQQAEDFKDAASLEVYDYLKKNPINKEIKEIQKQID
                     VLEQQKSEKTKELIRSLIITA"
     gene            complement(16047..16448)
                     /locus_tag="CPT85_06755"
                     /pseudo
     CDS             complement(16047..16448)
                     /locus_tag="CPT85_06755"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     start; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    16270..16295
                     /estimated_length=26
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         4661 a         3143 c         3134 g         5468 t
ORIGIN      
        1 acacaaacag ctggccgaag aaattgcaag ctatctgggt acaagcgtag gcccgatgat
       61 tatcaaaaat tttgcggacg gagaaatcta tgttcaggta cagcagagta tcagaggcga
      121 cgatgtattt ttaatccagc ctttatcaaa ccctgttaac gaaaacctga tggagctttt
      181 gattatgata gatgcgttta aaagagcaag cgcaaaatct atcacagcgg taattcctta
      241 ctacggctac gcaagacagg acagaaaaac atccggaaga gaagcaatta cagcaaaact
      301 ggttgcagac cttttgacaa cagcaggcgc tgatagaatc cttgccatgg atcttcacac
      361 aggtcagatt cagggatttt tcaacattct tgttgaccat atttatgcaa cacccgtgtt
      421 gacagactac attagaaaat tgaacatccc cgctgacaaa ctcgttgcag tcagccctga
      481 cacaggcggt gttcaaagaa caagagtttt tgcaaagcag ctcgactgtc ctcttgctat
      541 tgttgataaa agaagagaca aacacaatga agctattgcc gaccacatca tcggtgatgt
      601 aaaagacaaa atctgcgtgc ttgtagacga catgatagac acagcaggta ctatctgcga
      661 agcttcaaaa cttcttataa aagaaggtgc acaaaaagtt tatgtttgcg cagcccacgg
      721 tattttgtcc ggccctgcca ttcaaaggct ggaagaagct cctgtggaag aagttattat
      781 aacaaactca attcctttag acagagaggt ctcctccaaa tttacgcagt tgagcattgc
      841 gccgatactt ggggaagcta tttcaagaat tcatgacaac gaatcagtaa gctctttatt
      901 cggatttgaa aaagaataca agtcttacta atcaaatatt aagaaaagag agtaaattaa
      961 aatccgaagt tttttcaaac ttcggatttt tttatacagt tagactaaag ttacggaatt
     1021 aattattatc tgccanngag tgtttgtaga atttcgtttg ttgttgtgaa cacacggctg
     1081 ttagcctcga tagctctttg agaaacaacc atgtctgcaa attcggacgc caaatctacg
     1141 ttagagcctt ccaatacacc tgatttaaca ttaccaaatg ctgtagatga aatacttccg
     1201 taaagtacca taccgctgtt agggcctgtt gcataagtat tgttgccctg tgctgtcaga
     1261 ccttgcgggt taacaaagct ggccatttga atttgaaggt ttgcaggttc aacaagctga
     1321 tcattaacag taaggtcaga gccggtgatg attgtaccgt cgtttaatgt atatttaaga
     1381 atcatttttg acgggtcgga aggatcctgc attacgctca atgtatcgtt gttgccgtat
     1441 tttacttcta tcaggccgtt ttcgttaata gttacagaag taaagttttt ggagttgtca
     1501 cttcccatat taccttcacc aattgtctgg tgatagttaa taacctcgga agaagctacc
     1561 tgtgttgtag ggtccatttt acctatacca agctgtgtga caatgttaga agtaccgttt
     1621 ttaacttcaa atctgtctac accgtcagct tttatactga ctgtgccatc tacaatgctt
     1681 gcttgtacat cacctgcatt gttgatagca tcaagcagtt gattaacagt catatcactt
     1741 gttacattga ttgttttttc tgtaggtgtg cctgcctggt caaaagttgt gattataaat
     1801 gagccgtctt ttacacctcc ggatttgata ccgtttaatt catcaagagc tttattagcc
     1861 atttgagcct gtgttgcagg tgttgtgact gtatcaatat aagtaggaat tttaataggt
     1921 attgtgctgg atgttgtgtt gaggctgttg tttgtgccaa gcagtttgta accgcttgat
     1981 gtaaccatgt gaccgtcagc atcaactgta aagttaccgt ctcttgtata gagaatttca
     2041 acagttggag aagctactgt aaagaagctg ctgccgttga tacaaaggtc ggtattaaga
     2101 cctgttgtga gggttgtacc ggctgaaaag tctcttgtaa tagaagctgt ttgcacacca
     2161 ataccggttt gtttagggtt gataccaccc atctggcctg taggtgcttg acctgtagat
     2221 gatgttctgt agtaaacgtc cgaaaagttt acgttagaag ctttaaagcc gattgtattc
     2281 atgtttgcga tgttgtcggc tacaaccgaa attttggttt ggcctgctgc cataccgcca
     2341 atcgcagtgt aaaatgcttg tgtcattaat cctcccgttt tgtctttatt ttaactgtat
     2401 attttacttt tttattttct gttatagtct aaaattcctg tttccagatc ccctgtttca
     2461 gactggaaca tttccatttt ttgaagcaag ttggatgctg ttgcagtgtc gtctcccact
     2521 ttgccttctg acatgcttat gcctttaaag tcaccttttt cgatagtcag gataccgttt
     2581 tcgagttttg ttttaacgcc ggctttttca agctctttca taaagtcatt aaccgtcata
     2641 tcgcttgtga ttttaatgta tgtatgattt ttcttatatc cgtcatcttg agttgtaagt
     2701 gttacataac cttctgtaat accggatgct ccgttaagtt cacttaattt tttatcaccg
     2761 attgttttat catcagtagc cggagcgccg tctgtgatag cggcaacaag gccgagcgga
     2821 tagtctttgc cgttaactgt tactgttgca gagccgttag taaagttggc gcttgataca
     2881 acacctgtga tgagtcttga tgtgttgtta gggtcaacaa tttgaacagt tttgcctaca
     2941 aggtcattgg cctgttgaat catgttgttt gtgctgattg attcgttgag tttttgcagc
     3001 tctgtcagct gtgtaaactg tgcttgttga gccagcattt cagagttatc cataggatcc
     3061 atgggatcct gatttttaag ctgttccagc ataagcatta agaatgcgtc gccgtcaagc
     3121 tcctgcgaag cgccgtttgc cgcctgttct tttgctttgt ttaccgccgt attcgactgc
     3181 atatttacaa gttcttgttg gattgaaccg agtgatgcca ttttttacct gctcccctta
     3241 aattctagac tgagtagtct accttaccat tatgttttat caaagtatca gtatttttga
     3301 tttcaacgcc ctgatttggc tcagcttcct gcgaggaagt ttcgtatgat gattcatacg
     3361 cactatttga ttgttgatgt gattgattag cctgattgtg gctgttttgc tgtccgttaa
     3421 aagactgatt aaattgctgt tgttcaaagt tcattgcgtg gtttgcactt tcttgtgaac
     3481 attcaacctt aatattgttg acattaacgc cctgtgagct caggtttgat ttcaacgctt
     3541 ctacgttttt gtcaaaaagc tcttttacct gctggctgtc tgtagtcatt tttgcaacaa
     3601 ttccgtcttt tgagttcatg atttcaacgg aaactttgcc gagattttca ggctgcaaga
     3661 tgatagacac cttgttgttg cctgattttt gcagttcttc aaactttgca ttaacctgtg
     3721 acatgatgtc agactgattt aatgtagtgg ttcttgctgt tgcagaagca ccttttgcgc
     3781 taagctgtgc gtcaagttta ttaacaaacg cttcagcgcc ggaggtgttt gttggtgcag
     3841 catcaacaga caattttgct gcaagctcgc ctgctgtgcc ttgctgcatg tttgtgctgc
     3901 cgttagagtt gccgccattt gaatttgaat ttgaattgtc tgcctgagtt cttgcttctg
     3961 ttaccacagt gtctgtatct tgaagctttg tcatctgctc aacagcttta tcttttgttt
     4021 tggaagttgt atctttgttt tcaatatttt gagacgtatt ttgctcaaca ttgtctttta
     4081 gctgtgatgc aacctcctgt gtaactttaa taacaggaga ctcctctgct tttgtatcag
     4141 caggagtaac aggtgccggt acagcatttt gagcagtctc tgcctgttca atgttggcag
     4201 tcaatcttga tgtatcagct gcaaggttgt ctttagctgt ttttaaaggg agggtttgtg
     4261 cctctttttc aagtgcagta ttatttttca cttctgcctt aacttcagca gcctcgcttg
     4321 atacctgtgt atttatattt tctgcaacat ctttgacagt ttgtgctgtt tttagagtgt
     4381 ctgctaattt tacatctgtt ttttcttgag acggcacatc ctgtactatt tcagcagtat
     4441 cagaattttg tgtattttta gcttgctcta cgattttttt gagtgtttct gcgtcaatac
     4501 cggctttttt gagttctgta tctacagcac ttaaatcctc gtattcaata ttagagagga
     4561 tttgttcgtt tacaattgta ttaacgctgt ctttagaatt ttgtgtatca atcacagctt
     4621 ctgtagtttt tgcagcagca gtaactgtat tttccgagtc ttgctgcacg tcagtttgag
     4681 cagttgtttg tgctgatatt gcagttgtgg cttcagctga aacttccatt gaagcaagag
     4741 ctgcttgctg tgcgtttaag acttgtgttg tctgattttg aagctctgat tgagcattgt
     4801 tttttatatc tttgtcagac gcttcttgcg tatttgattc tgattttaca tcattgtctt
     4861 tttcttgttc tgatgtttgt gtattatctt ttttatctgc tttgtcttct ttatctgctt
     4921 tatgtgtatt gtcatttttt tccgcataat ctgatttgtc tgttttgttt ttgtcatcag
     4981 attttaaaga atctttttca tcaattttat cagaggtttc tttatcctta attttattag
     5041 aattatcgtt gttatctttt tttacctctg ttttttgaga gttaaggtcc tttgtttttt
     5101 gagcgtaatc atttgctgtt gaagaaaggt ttgtagattt atccgcataa gaatatgact
     5161 ttgacgcatt atccaacaca gaagagaatg cttcagagct gacgtttgcg tagttttgtg
     5221 atttagaaga aaacgcattt gccatcaatt gtgatggtaa tatttgtgat gtctgtgtat
     5281 actgtgaagt cattctctct ttttcctcga agttttagtt ccccttgctg cccccaagtc
     5341 tatgcagcct tttttttaaa accttgcgta tcttgatgaa gcaatatcgt ccagttcatt
     5401 tctttcgtat gcttcaaatt cttgatagaa ttttttcttc tgattttctt ttagtttttc
     5461 cagtaccttt ttttctttca aaacatcatt aacttctttt cttttaatat caagcagttt
     5521 tgtaatattt tgaacaacaa ctttctggtt ggaaatatct acaatcagtt tgttaataaa
     5581 atctttgtat ctttgcactt cgacaaggtc cagctcattt ccgctttgga atacatttaa
     5641 aagtgcctcg ttgatttcgg cctgatagcc ttcaagagtt ttttgtttgt taacagcgtc
     5701 ttgaagcccc ctttgaacct ttgaaagttc aaggagtttc tgttcaagga gcttttcctt
     5761 gatatcaaga acaacctgta gtctgaattg aaatttcttc aaatcttacc tttaacctct
     5821 taaattttta accaagtctt gatttataca atccgcacag aattatatac acatagggta
     5881 ctacatgcgt atcattaact gtatcctcca aaaaatgtaa attattaaag tcctttactg
     5941 ttgtaaacaa aaaatgttca tggtattgat attagtacca tacaaattta ttttgtatga
     6001 gtcttaaaga ttggatgtac cttcatttga agaaaaacat aaaactggcg aaacatgcag
     6061 gtttttgtta cggcgtaaaa agagccgttg aaacaacaaa aaaactaaag aacgaaaatc
     6121 ccgataaaga aatttttgta ctcggtgaat tgatacacaa ttcgcatgtt attaacgagc
     6181 tgtcggggct tggaatccac acagtggatg agctgccatg ctcaaaaacg ggtgtatgtg
     6241 ttatacgcag ccacggtgca gcgcctgaag tttttgaaaa cgcaaaagca aaaggctatg
     6301 acgttgtgga tttgacctgt tttgacgtaa aaaaagttca acaaaaagca atccagcttg
     6361 tgcaggaagg ttttttgctc gtgatagtag gaaaacctga acaccctgaa gtttgtgcaa
     6421 taaaagccaa cgcacaaccg catggcgaac acgttattgt tgcgcctgac acagaatctt
     6481 taaaagagtt tgaagaagaa atcatcaaac acaaaagagt gggtgtggtt gttcaaacaa
     6541 ctcagagaat agaaaatctc aagagtgttg taaactatct tctaccgctg gcaaaagagg
     6601 taaaagtctt caacacaatc tgtgcttcta catctttgag acagtccgag gcaaagagcc
     6661 ttgctctgga atctgatttg atggtggttg taggaagcaa aaagagtgcc aacactaccc
     6721 atcttgcaga aattttatca ggcattacat caactatcca catagaaact gacgaagagc
     6781 tcaaaaacta tgatagtttg ataaaaaatg cacaaaatat cggtgtaacg gccggtgctt
     6841 ccacccccga cgcgataatt gaaaatgtta taaacaaatt aaataattac taatgaaagg
     6901 aaaaaagtaa aaatgacaac acaaatggac gaattcgaaa gactattgga agaatctttc
     6961 aaatcaaaat taagcgtggc tgacgttgta agaggccagc tcgtaaaaaa agaaaacgac
     7021 ggatacctcg ttgatatcgg ttctaaatca gaaggtttcc ttcctaacag agaaatcccg
     7081 acatcaatgg ttgatgatat gaaaatcggc gactgcaaag aattctacat cttaaaagaa
     7141 gatgaagacg aaaaaagcgg tatgcttctt tctcttaaaa gagttgcttg tgctcaagct
     7201 tggcagactc ttcaaaacgc taaaattaca ggcgaaacag ttactgctaa agttgtttct
     7261 cttgttaaag gcggcgtaat tgttgaagtt aatgacctcc gcggttttat ccctgcttct
     7321 caattaagaa caggtatgcc ttttgacggt ttgatgaatc aggaaatcga agttaaagtt
     7381 cttgaagctg acgcaaaaag aaacaaactc atcctttctc aaagacaggc tctcgctgaa
     7441 caaagagaac aactggttga cgaagttatt tctaaccttg aagttgatca gacagttgaa
     7501 ggcgaagttg taagaatcgc tgatttcggt gcatttattg acatcaacgg tgtagacgga
     7561 cttcttccta tttctgaaat ctcttggcag agaatcaaac atccttctga tgttttaaca
     7621 ctcggtcaaa aaattgaagt taaagttctc aaaattgacg aagacctcaa acgtatcagc
     7681 ttgagcttga aaagaatcgg cgacaatccg tgggaagaaa tcgaagacaa gtttgaagaa
     7741 ggacaggtta taacaggtac tgttaacaaa gttacttctt tcggcgcttt catcaacatt
     7801 ttccccggcg tagaagcatt gcttcctgta gctgaaatgg aagactcaaa cgctaacccg
     7861 tttgatatct acaaaaacgg tgacgaagtt aaagttctta tcaaaaaatt cactccgcaa
     7921 gaacacagaa ttgctcttag cgttaaagat atgaacaact agttttctag tttaaataaa
     7981 aagaggtaaa tttttcgatt tacctctttt tttatgcctg ttttaaaaag aacctattcc
     8041 ctatttgcat gggttttcaa tatctttttc aaaccttctt ttttcaggat tgtatctgta
     8101 tattttatag gtttttccat ctgtcgtaat tttcattgca ttatccacat ctgttctgta
     8161 tgttctgacg ttgttttttc tcagagtttt gagcgtttgt tttgtggggt gaccgtaagg
     8221 gttaacacct gtgctgataa caacattttg agcatggatt gtgttgagca tttttgaggt
     8281 aacagtgttt tttgctccgt ggtggccgga tttgagcact tctatttcag ttttattcaa
     8341 atcttttttg attttattaa aacttctcac cccgccatca gccataaaaa gcatatcaaa
     8401 atcgccaaag ctcaacacag atattgttga attgtcatta tcatttttgt tgtgtgtaaa
     8461 atccggtgta aatgtagtga gagtaaggcc tttttcgctg tgcacaactt cattattttt
     8521 tgcatctgta gtgtttactt tgttttcttt gacgtattcc atgattgcct ttgttgtttt
     8581 ggaatcgtct ttatccttgc tcaagacaag ccttttgacg ttagctgttt tcattatgtc
     8641 aacggcaccg ccggagtggt cagcatcaaa atgcgtaaga atcataagct caagctcttt
     8701 tatgcctttg tctttgaggt atttgcccat tattgcattt gcctgcgaaa atgttgcctt
     8761 tgacccttta aaaatgccgt gagccgtatc tatcattatg tatttatttt ttggcgtttt
     8821 tattaaaaag ctgtcagcat tgcccacatc aaaaactatt atctcgcaat ccttggatac
     8881 aggagataaa agcggtttta ctacaggaag caaaagcgaa attgttagta caataccaag
     8941 aatcacagac gcaacaagtg attttttctc tttaaaaccg cacctcattg agcgggccaa
     9001 aagcaaaagc gcaccgtagt acaaaatcat ctgtgcactg tgagggtgga ttgttgtaag
     9061 caaagaattc ggcagccccg caaagaaatg cgagatgctg acaagaaaac tcacaacagg
     9121 attgagcaca aacgcaaaaa ccaagcacac cttatccgct ataaaatcaa caggaatcat
     9181 agcaagtatg gaacctaaaa acccgccaaa acttatcagc ataataaaag gcgtaatcgc
     9241 aagatttgca agcactgaat acgttgcaaa gttgttgaaa taaaacatct gtatcggtgc
     9301 agcccacagt tgagcaacaa aaggtattaa catagcacct gcaagaaaat ttgcgggctt
     9361 attttttatc ctgtccaaaa taggcggcac acaatagata agagcaaacg taaccacaaa
     9421 tgaaagctgg aagcctacat cattaatcat tgcagggtca taaagaagca ataataatgc
     9481 gactaaaaaa atcaaagcta tgctgtcagc agccctgtct ataagtttgc cgagtattac
     9541 aaactctatc atcagcgcag cccttaatac agaagggccc atgcctgtca ccaacgtata
     9601 aaacccgaca agcacagcac caaccaaaat aacaaacctg taattgagcc tgagccgtgt
     9661 gcctataaaa taccagatac caaatataat agaaacgttc atacctgacg cggccaggat
     9721 atgcaaaagg cccgagttta taaaggaggt ttttattaaa tccggaggat taattgcatc
     9781 atcgccgaac acaataccgc caagcacctc aatgtttggg cttttcatgt attttttctg
     9841 atggtttaag atacgggttc ttgtatcatt gagtttttgc aaaaattttg aaccaaagga
     9901 ttcgggctgt gaaacgattt tccaatcccc ttcctgcaca taaaatgttg aaaaagtctt
     9961 tttgtttttc aaatagttag cataatcaaa ctggcacgga ttttttgcac taaaaggact
    10021 cctgagtttg cctttgagtt gtattttgtc tgatattttt atcctggaaa tattttgggg
    10081 tgtgtcataa agcgtgacaa tagtcctacc gtctagtttt ggcactttta caccgtcaaa
    10141 ctctcctgat tgtgctttaa gataaaactt tgtacgaaca ggcacatttg ttgtgggaat
    10201 tgtctcaaca gtgcctgtga tagcagcgtc tgagggtata aacgctgaaa gtccgtcata
    10261 gttttttatc tgaaaatgac agttgcaaat agccagtgca aacgccagat aatacaacac
    10321 tgcacctttg caagatattt tttcattgaa aagaaaaatt attgcaacca caagcaataa
    10381 tagtgccaca agaggtattg tgtttgtaaa aaatccaact atgcccagaa tgtaaaacgt
    10441 tgaaaataaa attatgccgt tcattattta ataatataaa aaaagacctc taaataaaaa
    10501 catttaaagg tcttttacaa ttcgattaat aaattctatt ttttcttgct gtaagcgtca
    10561 ataatatcct gacgagtatc aagcataaat tgtttgtctg caatatcgtc tttgagagca
    10621 tcaattattt ctctttgatg ttcaatatgt tctgatttta ttttgttcat atcgtgcaaa
    10681 gttttgatat gctttgcgac aaagcctgct gcagccagtc cgacaaatgt taaaaatgct
    10741 gctgcacctg tttttttagg gttcttttta acaaaatcca caacatcgtt tttcaactct
    10801 gttgtatatt gataaccgga agcaattttg ggttttactc tggtttgata gccgtttctt
    10861 atattatctg taacgttact tattgtttga ccaattttcg gggatgtcat ttttaattac
    10921 ctcacgattt tacacatgtt taataagttg taagaaaaaa aataattgcc gtttttttta
    10981 aaattaaagt cagaatgtta caaaactcca caattgtaaa cttatgtaaa ttgtatataa
    11041 aaaatatata aaactgtgtc aattatttgc tccaagcggt ttttatttat atataagaag
    11101 taaatttttt aaagtaaatg aagaaagaga gtagaaaatg acttttgaat nnnnnnnnnn
    11161 nnnnaatcac aaaaattaag caagctcgtt actccttcac aagtacctgc tacgcttaaa
    11221 tattctgtta acacaggcaa tataaacggc tctaaagctg atggcacagt cggagacggc
    11281 gtgggtgact ctgtaagctt cagttcacaa aaggctgaag tagaccttga tgtaaacagc
    11341 agctctcaaa aaggtgaaac aaaagaagaa agaatctcca tagctgaagg caaagtatca
    11401 aaatccacca ccagcgcaac aaatgcagac aacaatgttt catcagctga aagcgcagaa
    11461 tcacaagcaa aatcagcata tcttgaagca gatgacaaag ctaatgcagc agaagataca
    11521 tttaaccagg ccgaagtaaa aactacacaa gccaaagaaa aatctcaagc agcagacaag
    11581 aaagaacaag ctgctcaaac aaaagaacaa gaagcacaaa ctgcagaaga aactgccgct
    11641 aaacaagtaa cgacctgtga aagccagctt caaaaagcac aagcacaggt acaaacagca
    11701 caagcttctg taaacagtgc agaatccgca gtagaacaag ctcaagcagc ggtaaacagt
    11761 gctgcaacac ccgcagctaa agcagctgcc actgctgcac ttgcagctgc aaaagcaaaa
    11821 ctggccgcag caaaagctga actcgcaaaa gcacaagccc aagaacgcgc tgcacaaaca
    11881 gctctggaca atgcaaaaca acagcatgaa caggctaaaa cagaattgaa cacagcaaaa
    11941 gaagaacata cccaagcatc aaaagatgct caaacagcaa aaaaagaata cgaacaggca
    12001 aaaagcgaat cagataaagc aaaagaaacc ttcacatctt tgagacaaac agctgacgct
    12061 aaaaaagctg attggcaaac agcatcagaa gaaattcgtg ctgcaaaaga aactaaagaa
    12121 gctgcaaaac agcagttaga cgaagctcaa aaagagctgg atgcagcaaa agcaggagaa
    12181 aaagaaccaa gcaagctcga aaaaatatca aaaacagcag gtcttgctca acagggcatc
    12241 ggtgcaataa gcggtcttgc gcaaactttc ggtaatctaa aaggttcatc agacgcttcc
    12301 tcttcaggtt ctactccaat gcctgcagca ttgagtgcaa gccttaacgc gactttagcc
    12361 tctacaagaa attacatcaa tcaaggcgac aaagccggct gggacaattt gtttatggca
    12421 ggcaacacaa caaaatcccc acaggttgca aacaacacaa cagccaccaa caacatacaa
    12481 acagcagcaa acagcacagc aaattcatct gcacaatcaa acaatatatt caaactcaaa
    12541 cttgcataat aaatttcgac agtaaaaaac ccgcttatat aaagcgggtt ttttatttat
    12601 acatttgcct gattattagc cgatgagctc ctggaacatt tttcttactt cttgtctgtt
    12661 gctttctgtt tgagttcttg cagatgcaat gttttgttca ttgtttttag acattgcttc
    12721 caatgcttct gtcattgtag cgtaagaacc aaaatcgtaa gaaactgcaa ggaaaggatt
    12781 tgatttagtt tcagatttag cagtttcacc atagtttgta tcaacattgt tgttagcaat
    12841 tgttgtattg atgtctgcaa cttcttctac ttttacttct gttgtttctt taccgtcaat
    12901 agtgttgatc tggttttgag ttgtttgaat atttgtgttt actttagcaa tgtttttatc
    12961 aattgtattg atttctctgt ctgtagtgtt gatttcattg ttaacagtat tgatttgttt
    13021 gttgaaatca gctatttggg cttttaaagg agcatttttt tctataagtg cttcgttagc
    13081 cgcaacagat gcagtgattg ctgcttgata tccttcgatt tcagtttgtt taagtgacat
    13141 ttgttctgac aatgtgtttg caccggaaat caatgctttt acctgtgcgt tcaaagagtt
    13201 gattgcagtt aactcttctg ttgcaacgtt aacattgccg ttgcctactt tttgcattac
    13261 gtattgagct acttcatttt gttcgatttc gcctgattca acttttgcat aagcttcttg
    13321 atatgcttgt tggatttgtc cttgttgatt ttttacgttg ttatcggagt ctgatacgat
    13381 ttttgcaatt ttatcgctga tttgttggct caattcgtta gcttctttgt ttttttcgtc
    13441 gtattctttt tgtaattttt cgatttcatc ttgagctttt tcaatgtttt gttcgttttt
    13501 tgcgatttct tcttcattgc ttttcatttc agcttcgttg gctttgattt gagcttcaac
    13561 attagctttt tgattagtga tagatttttt ttgagcttct aattcttttt tgtaagcttc
    13621 tttttctgat tttttagatt ctaattgagc aagctgttgt tcaagtttag ccaattcagc
    13681 ttcaagaagt gttttttgtg ctgctgtatc agctttttca gttttagatg tttcttctga
    13741 accgaaaagg ttttgagttt cttgagcagg agctgtagaa gctgctgtcg gttgagaagt
    13801 ttgattttta tttacaccgt ttactgttaa tgacataaaa tacacctttt taattacaca
    13861 catatatata aaaacatttc attatatacg atttcaatat ttattatatc tgttacaatt
    13921 gtttacattt ggtgtaaaag tcaataaaaa gggagcttag atgctccctt tgatttattt
    13981 attcaattct tctgaaagaa gtttgttaat aacctgagga tttgcacggc cttttgtttc
    14041 tttcataatc tggccgacaa agaatcccat aaggtttgtc tttccgcctt tgtatgcctg
    14101 aacctgtgca gggttgtttg caacgacttt ttgtacaagc tcttttatcg caccttcgtc
    14161 agagattacg ctaaggcctt ctttttcaac gatttcttta ggctgcgcac ctgtctcgag
    14221 catttgaggc agaatctttt tggcaatgtt gtttgagatt gtgccttttg tgatgaggtc
    14281 tacaagctct gcaagcgcct ttggagtcag ttttgtctcg tttatattaa tattattttc
    14341 ttttaaatat gctgtaatat cacccacaag aaggttattg gccgttctgt aatcagcgcc
    14401 cagtttgagc acctcatcgt agaacagagc tgtttccatc tgatctacca taacatttgc
    14461 gtcataagca ctcaagccaa gtccttcata tcttttacgt tttgcttccg gcaattccgg
    14521 catttttgct cttacttctt ccacccattc tcttgaaatt tcaacaggca tcaaatcagg
    14581 ctcggggaag tagcgatagt cgtttgcgtc ttctttactt ctcattgttt ttgtaacttt
    14641 ctgattatca tcccagagtc ttgtttcttg atcaacttcg ccgccgtctt ccacgatttc
    14701 tatttgtctg tcgatttcgt attcaatagc tctttgtaaa gcagagaagc tgttgatgtt
    14761 tttgatttcc gcacgtgtac cgaatttgtc agagcctttt ggcattacag agatatttgc
    14821 gtcacatctc atagagcctt cttccaggtt gccgtcgcac acaccgatgt agcgcacaat
    14881 gtttcttaat tcttccatgt aagctcttgc ttcctcactt gagcgcatat caggttctga
    14941 aacaatctca agaagcggtg tgcctgcacg attgaggtca acaagcgagt acaaagaacc
    15001 ggcaagaccg tcagcgcctg cgtggacaag ttttcctgcg tcttcttcaa ggtgggcacg
    15061 ggtaataccg attcttttgc cgtttatgtc aatatggccg tttatacaaa taggctggtc
    15121 atattgagaa atctgataac cttttggaag gtcagggtaa aagtattgtt ttctgtcgaa
    15181 tttgcatcgt gccggaattt cgcagttaag agcaagccct agcaaaatac ccatattaac
    15241 gcattcttta ttcaacaccg gcagcacacc cggcataccc agagtgattg tgctggtgtg
    15301 gctgttgggt tcagcgccga attctgttga atccggtgca aatatttttg atttggtctt
    15361 taattgagcg tgaacctcaa gacctattac aacttcgtat ttatctctta ctgcttgtga
    15421 aaccatactt cgacttcctt aattattact gactttttta tagtaataat tttagcacaa
    15481 agttatctat gcagtaataa tcaaagaacg tataagctct ttggtttttt cagacttttg
    15541 ttgttctaat acatcaattt gtttttgtat ttctttaatt tctttattaa tcgggttctt
    15601 tttaaggtaa tcgtagacct ccagagaagc agcgtcttta aaatcttctg cctgttgtct
    15661 gttcatgccc tgtccgagca atctttgatg ttgttcatca aacgggctgg caaattttaa
    15721 aaagctttta aaattatccc gcatattaat actgttatag tcgttaattt tggttaccct
    15781 ttgaccgttt ctaaggtttt ctatataaat ttcaccgtct cgagactcac tataaccaag
    15841 cactgcatca cgatttttgt ggtcgagcat ttttaatgca accataagtt cttttgtggt
    15901 tttgtcatcc tgtgaggcat aatcaatcag cccagaaaaa tcgtccccgg gcttggaaac
    15961 aatttttgca ccgaatgaag agtttttttg aggataattg agaccggttg agaaaacatt
    16021 ttgcactttc atttataact ctcctgttat ttattaacac atcttgattt aataagctcg
    16081 agagaaaaat cttctctttc tctgtataat tccggaagca aatcaacaca ctctgtatcg
    16141 ttgtctgatc tgtatatttc ctggtttaca gctttcaatt tttgagcaaa ggggttggaa
    16201 tccaagccgt catacaaatc aatctctgca ttccacatgt gcatttgtgc atcgtcttgg
    16261 gacattgcan nnnnnnnnnn nnnnnnnnnn nnnnnaagct ttaaaagtcc gaataatgca
    16321 ggattcatat ctcttcttaa aacaaagtca tttttgttta taccaacaga tgatacgggg
    16381 ttttgttctt tagtcggatt gataatttcc acaatcattt cgcccgcatc ttcatcttct
    16441 ttgcattt
//
LOCUS       DABS01000153            3016 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_20562, whole genome shotgun sequence.
ACCESSION   DABS01000153 DABS01000000
VERSION     DABS01000153.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3016)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3016)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3016
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            135..320
                     /locus_tag="CPT85_06760"
     CDS             135..320
                     /locus_tag="CPT85_06760"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22135.1"
                     /translation="MTKNERIRALKKEFKILLQKLERLLKTTNRQNSIDDVIDLIQTF
                     YFVYHKVSDCQKLVSKL"
     gene            356..958
                     /locus_tag="CPT85_06765"
     CDS             356..958
                     /locus_tag="CPT85_06765"
                     /inference="COORDINATES: protein motif:HMM:TIGR00057"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="DAB22136.1"
                     /translation="MIFDNSEFTKELNEKLHNKAHGGVVSFVTDTVWGVGCLPENEKG
                     AENIYALKNRDRSKPLILMSNSVEHLLPYVKNIPPKARELMEKHFPGALTLIFEKSDK
                     TPDYITSHKNTVGIRVPDNPVFKRLCEVVDGHVLATTSANLSGQDAASNYEEALKNVG
                     AHVDYVFEDYGFLCQGLASTVALALDDEIKVLRQGEVVID"
     gene            1069..2314
                     /locus_tag="CPT85_06770"
                     /pseudo
     CDS             1069..2314
                     /locus_tag="CPT85_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_847211.1"
                     /note="frameshifted; too many ambiguous residues; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
     assembly_gap    1320..1321
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1892..1945
                     /estimated_length=54
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2456..3016
                     /locus_tag="CPT85_06775"
                     /pseudo
     CDS             2456..3016
                     /locus_tag="CPT85_06775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011890405.1"
                     /note="frameshifted; incomplete; missing stop; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2780..2781
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT          938 a          597 c          625 g          798 t
ORIGIN      
        1 tctttatttg tccagtcatt tatattcatg tatttaatga taaagacatt gacaaaaaat
       61 tactatatag atataataat aaatataata tgtattaata catattatat ttataaatta
      121 ttaaggacgc tgctatgaca aaaaacgaac gtataagagc attgaaaaaa gaatttaaaa
      181 tacttttgca aaaattagaa agattactca aaactacaaa cagacaaaac agtatcgatg
      241 atgtcattga cttaatacaa acattttatt ttgtatatca caaagttagt gactgccaaa
      301 aactcgtttc aaaactctga ttgacattgc tctagatgga atgtattttt aaagtatgat
      361 ttttgacaac tctgaattta caaaagaatt gaacgaaaaa ctccacaata aagcccatgg
      421 cggggttgtg tcatttgtaa cagacacagt gtggggtgta ggctgcctgc cggagaacga
      481 aaaaggtgcg gaaaatatct atgcactcaa aaaccgcgac cgctcaaaac ctttgattct
      541 tatgtcaaac agtgtggagc acctgctgcc gtatgtaaaa aacattcccc caaaagcccg
      601 tgagctgatg gaaaaacatt tccccggtgc attgactctg atttttgaaa aatcagacaa
      661 aactcccgat tacataacat ctcacaaaaa taccgtaggt atccgtgtgc cggacaaccc
      721 tgtattcaag cggctttgcg aggttgttga cgggcatgtt cttgcaacaa caagcgcaaa
      781 tctttccggt caggacgctg cttcaaatta tgaagaagct ctcaaaaacg taggcgcgca
      841 tgtggattat gtttttgaag attacggctt tctctgtcag ggtcttgctt ctaccgtggc
      901 gctggctttg gacgatgaaa ttaaggtgct gcgtcagggc gaagttgtga ttgattaagc
      961 tatgtaaagc tcgctgctac tttgtttgac cctggtttta ctttgattta acatgttcct
     1021 aatctcgcag agtaacgcgg gtgtaattat gaaagggaac attacaaaat gacatcaaaa
     1081 agatttcttt ttacgtcaga atctgttaca gaaggccacc ccgacaaggt gtgcgaccaa
     1141 atctctgacg caattctgga tgaattcctc acaaaagaca aaagctcaag agttgctgcc
     1201 gaaactacag taactacagg tatggctctt gtttgcggtg aaatcacatc cgactgctac
     1261 gtggatatcc cgtcagtagt aagaaatact attaaaaata tcggctatgt cggtaaagan
     1321 naaaacttgt gctgtattga cttctatcga tgaacagtct acagacattg ccggcggtgt
     1381 aaacaaagcg ctcgaatcaa gaaacgacaa ctctgacact gcttcaaccg aaacagaaaa
     1441 cgtaggcgca ggcgaccagg gtattatgtt cggctttgct tgtgacgaaa cacccgagct
     1501 tatgcctctg cccatcagcc ttgctcacag actggctttt agacttgcac aggttagaaa
     1561 aaacggttct ttaggctact taagacccga cggaaaatca caggttactg ttgaatacgt
     1621 tgacggcaga ccttcaagaa ttgatactat cgttctttca actcagcacg accctgaaat
     1681 caacggcgtg tctgacaaca aagaagtaca ggaaatcatc agacaggatt tgatagaaaa
     1741 agttattaaa cctgtatttg aaaacgacgc tatcaaacct gacgaaaaca caaaatactt
     1801 aatcaacccg tcaggcagat tcgtaatcgg cggccctcaa ggcgatgccg gtttgacagg
     1861 tagaaaaatt atcgttgaca catacggcgg tnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1921 nnnnnnnnnn nnnnnnnnnn nnnnntatgc tacacgttat gtggctaaaa acatcgttaa
     1981 agcaggcctt gctcaaaaat gcgaagttga gctcggatac gctatcggtg ttgcagaacc
     2041 cgtgtctgtt atggttgata ctttcggcac aggcgttatc tctgatgacg aaatatcaga
     2101 actcgtaaga aagaattttg acttaagacc ggctgctatt atcaagcagt ttgacttaag
     2161 agggctgcct tccaaaaacg gcggtaaatt ctaccagctt ctagcagctt acgggcacat
     2221 gggccgtaca gatatcgatg ttccatggga agctacagac aaggctgctc aattaaaaga
     2281 gcaggcaggt cttaactgct gcggctgtaa ataagaattt acacgattgc aaaacgggtt
     2341 gttttttgta aacagcccgt ttttttaata aaaatttatc aattttgctc aatttttttg
     2401 taaaatggct aaaaaatggt aaaatattta aatatattat ggttttggag taataatgac
     2461 aggtatcgaa acacaaacac aaaaactgac cggagcgcaa atatttttgg aatgcctgaa
     2521 aaaagtcggc gttgatgaaa ttttcggcta tccgggcggt gtaatattga ctatatacga
     2581 ggcgctttac aactgccctg aaatcaaaca ctacctcgtg cgccacgagc aggctgcaat
     2641 ccatgcagca gaaggctatg cgcgtgttac gggcaaggca ggtgttgcac ttgtgacttc
     2701 aggcccgggg gcaacaaatg ctattacagg tattgcaaat gcctactacg acggctatcc
     2761 gcttgttgtg ttcaccggtn ncagattgga aacgatgctt ttcaagaggc tgatattata
     2821 ggaatcacaa gaccttgctg caaacacaac tatcttgtaa aagacgtaaa agacctttct
     2881 cgtgttataa aagaggcttt tcatattgca acaaccggca aacccggccc tgttgttgtt
     2941 gatatgccca aggatattct aagcgcctca acagagtttg tctggcccga ttgtgtgaaa
     3001 ctgccgggct acaacc
//
LOCUS       DABS01000154            8935 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_10957, whole genome shotgun sequence.
ACCESSION   DABS01000154 DABS01000000
VERSION     DABS01000154.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8935)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8935)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8935
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            3..176
                     /locus_tag="CPT85_06780"
     CDS             3..176
                     /locus_tag="CPT85_06780"
                     /inference="COORDINATES: protein motif:HMM:PF03572.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22103.1"
                     /translation="MTTEFVDALNKTQLCEGLIIDLRGNTGGLMPNAVVIADMFLTQG
                     HIVSVVDRDRXXI"
     assembly_gap    167..168
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            173..427
                     /locus_tag="CPT85_06785"
     CDS             173..427
                     /locus_tag="CPT85_06785"
                     /inference="COORDINATES: protein motif:HMM:PF03572.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22104.1"
                     /translation="MNAQPKPYAISKPVVILIDEGTASASEILSGALKDNQKAILVGK
                     RTFGKGMIQRIFPLPDSTGMNLTIAKYLTPXRVLILTKKE"
     assembly_gap    394..395
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(552..1805)
                     /locus_tag="CPT85_06790"
                     /pseudo
     CDS             complement(552..1805)
                     /locus_tag="CPT85_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006320445.1"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1472..1484
                     /estimated_length=13
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1836..2216)
                     /locus_tag="CPT85_06795"
     CDS             complement(1836..2216)
                     /locus_tag="CPT85_06795"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22105.1"
                     /translation="MVDNRSAGFFGIGGGFNFKSGDISGTAAKTADDRQSPGMDYFQQ
                     EMQEEGQQFAESQFVDRSAQLNATLNSLAMMNVANIIKKKKEEEARAKEKNNNKEEKQ
                     KILDEKIPLWEDYQDENEDFFYVD"
     gene            complement(2383..2649)
                     /locus_tag="CPT85_06800"
     CDS             complement(2383..2649)
                     /locus_tag="CPT85_06800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015080346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22106.1"
                     /translation="MSIAALVNDIFNVYFWLIIVRIFLTWIPSIDWYSQPFKSLAVIS
                     DIFLEPFKRIIPPMGGLDFSPIIALLALQFIQYAVVRMLVILGV"
     gene            complement(2667..3470)
                     /locus_tag="CPT85_06805"
     CDS             complement(2667..3470)
                     /locus_tag="CPT85_06805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013430311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="DAB22107.1"
                     /translation="MQNKKLADIGVFGGSGFYKFLDNIEEVRIETPYGAPSDSVFIGE
                     IGKHKVAFMPRHGRNHTLPPHLINYRANVWAMKSIGCERVISPCAAGSLQTHVAPGHF
                     VICDQFVDWTDGRKSTFFDGPIVTHVSAANPYCEEMRQLAVATAKELGITVHETGTVV
                     VINGPRFSTKSESKFFTSQGWEVINMTQFPEAYLVKEMDMCPLNISLITDYDAGLVGE
                     VPPVQHAEVIKVFNDNNEKLKALLFNLIEKLPVERTHCDCAKTIAGSRV"
     gene            complement(3501..4127)
                     /locus_tag="CPT85_06810"
     CDS             complement(3501..4127)
                     /locus_tag="CPT85_06810"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22108.1"
                     /translation="MNKDVKKAAFTMAETLLTLAIIGVVMALMLRAINRVNPDKNKVL
                     FLKSYHAIETVIADIINDSTKYDQYTDENADFSAKPLSTAKASYINKGSELTVCEDGC
                     DKKFTQPKAVCYFLADQINTIGEVNCDNDTTMNFKTSIGACFWGWQNVDSNGTLEAIV
                     DPTCSDDKKNGYVVKLFKDGKMTVPETSTKVNDQATAYEWMQDQTQVK"
     gene            4249..4494
                     /locus_tag="CPT85_06815"
     CDS             4249..4494
                     /locus_tag="CPT85_06815"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22109.1"
                     /translation="MVNGLSPSNIPYQGFPANAVGATPVTKDIASYCYDTQRTNIAKT
                     YHHLTSEDKQSYTWPIIGAVVSFLSLLAVTSIKRGKP"
     gene            complement(4491..5708)
                     /locus_tag="CPT85_06820"
     CDS             complement(4491..5708)
                     /locus_tag="CPT85_06820"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02754.14,HMM:PF13183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22110.1"
                     /translation="MNNLKDYEEDIYKCSRCGLCQFVCPVFKASVNECAVSRGKFNML
                     NGVIKGELSLNRKIKSYLDLCTGCNACKDFCPSKINAKEIFIAAKAQYYKNNKISLKE
                     KIVNSYVLFKTALCCAFIFFSVYRFLRMDKIIKKFEKYILKTGLPGKRLVLLNSLAHT
                     QYNQRTTPHNKNNMQKAVYFEGCFNKYINKQTENAVKKILNNANIELIKKDFECCGVS
                     YLNDGNIDAFIKIANINLEKIDCDFDYILTDCASCEEVLKTYKDYATLPNAQKVCEKT
                     ISVVDLIKKIKFVCNKNLKIAVHKPCHDDYDFIDIVKNIDGITYVEAEDFDKCCGFSG
                     KFALQNSEISRKISKVKAQHYIEKNTDIILTTCPACILGLNQGLAEIQNSQKPEVMNL
                     FVFLALYCTPTEY"
     gene            5781..6695
                     /locus_tag="CPT85_06825"
     CDS             5781..6695
                     /locus_tag="CPT85_06825"
                     /inference="COORDINATES: protein motif:HMM:PF08240.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22111.1"
                     /translation="MRTAVAENQKISIQERPQPQLSDFGNYGAVVKVLGCGLCGSDIV
                     KFLHDPSEKVLGHEVVGEIVDLRPKFMSKFKIGDKVVLGHHVPCMKCDYCDNKNYSMC
                     RQFKETNIRPGGFAEYIYVSPLHLKNTVFKVPSNLDDMEISFMEPLACCIRAVERAEV
                     KKGSTSLVXGLGSIGLLMGQAVKAFKGDVIGCDLIEERVALANNLNFDASIKFEDNDT
                     TAAKIKEMTCDLGADIIFMTSGSDKAIEFALKSVRDGGTILVFSSVPNDTAGYTNNDI
                     YYRELKILGSYSXFSFACRSCACSQASC"
     assembly_gap    6284..6285
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    6646..6647
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6844..7875
                     /locus_tag="CPT85_06830"
     CDS             6844..7875
                     /locus_tag="CPT85_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018206305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="DAB22113.1"
                     /translation="MKAIRYYAPQDIRYEEVDIQQPGDNEVLVRIQAALTCGTDVKTF
                     RRGHPVLIKKTPSGFGHEFAGIVEQVGNNVVDFKPGDRVVAANSAPCGKCFYCLKKQY
                     NLCENLDLLNGAYAEFITVPERIVQKNLLKIPTGLSFEKAAFAEPLANVVHGVERTGI
                     QPWDTVGVVGIGPIGLMFARLAKLKGANVIAAGRNPLKLKLAKDFANADEVIDLKKYQ
                     HPEKIFKSFTQDGRGLDVAVECVGLPEIWEKMFSLVRKGGKVHLFGGCKSGTTVNLDT
                     RRLHYDEVQIISVFHHTPQYFRQALDLIADGHVDVTKLITKTMPLSQAKEAILAHERG
                     DAIKVLLTP"
     gene            8193..8918
                     /locus_tag="CPT85_06835"
     CDS             8193..8918
                     /locus_tag="CPT85_06835"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22112.1"
                     /translation="MYFDSLIKSNEFKKYNNFNKKSAKDISFSALPLSGVEKIKNSGM
                     WKLFNQKWISKFIAKADSSQTIFDAIFALAITCVFRPAAIMAQSSEKTKKKDMKAAEH
                     SISSGLIGYGFAILVFSPIKKALDKIKAHPEHFAKKASAFFKYADKNMNKSMSSSKRM
                     QTYTMLFNKTAEILTASFRSGLTIGMIPYIDQYIFTPLLGTKATEETKKELQNPVYKF
                     SVINFKNNQETNKVFQNFTGVMK"
BASE COUNT         2702 a         1610 c         1621 g         2981 t
ORIGIN      
        1 atatgacaac agaatttgtg gatgcactta ataaaactca attgtgtgaa ggtttgataa
       61 ttgatttaag aggcaatacc ggcggactta tgccaaatgc tgttgtcatt gcggatatgt
      121 ttttgactca ggggcatatt gtcagcgttg tggacagaga caggcanntg atataaatgc
      181 tcaaccaaaa ccatatgcaa taagcaaacc cgttgttatc cttatagatg aaggaactgc
      241 aagtgcctcg gaaattttaa gcggtgcttt aaaagataat caaaaagcaa ttcttgttgg
      301 caaaagaacc tttggcaaag gtatgattca gcgtattttc ccgttgcctg attcaacagg
      361 catgaacctg accattgcga aatatctgac accnntaagg gtattgatat taacaaaaaa
      421 ggaataacac cggattacga ggtttcttat acggaaaaag attttttgaa agacaaagac
      481 cctcaaatgg atgaagctaa gaaaattata cacaagctaa ttttgtccaa acatgagata
      541 gcaaaagcag gttagtcgta atagtcaaac tgtatgtgtc ctattttgac aacgtctcct
      601 tctttaattc cagcttgttt taacgcttcg tatacattca ttgatgcaag tatattctgg
      661 aatctgtaaa gctgatcaat gtttcttgtg tcagtaacat tagccagtcg tatgattttt
      721 ccaccctcaa cgctgtaagt atttttatct attttgtata cagcatagtc actgtcgtca
      781 ttatcaaatg cggcaaggtc ttcttcaata tcaattttga attccggttt tggtatttca
      841 tcgacttttt gcattacaaa atccaaaaac ggcttaatat tttcttttgt tgctgctgag
      901 attaaaaata catcagaaga aaattcttta aatattttga gatattcctg tcttatttct
      961 tcatcaacag aatcaatttt attaagtgca ataatttgat ataaatttcc gagtctttca
     1021 gagtgttttt tcaactcttc attgattttt ttatagttgc ttacaggatc ttcctgcgta
     1081 atatcaacaa catgtatcaa aaatctgcat ctttcaacat ggcgaagaaa ttcttgacca
     1141 agccctatgc cttcgcttgc cccttcaata aggccgggta tgtctgcaat gacaaatccg
     1201 tctccggatg gctttttgac tactcccaaa tgaggaatca atgttgtgaa cggatagtct
     1261 gcaattttag gttttgcgct gcttactgtg ctgataagtg ttgattttcc ggcattaggc
     1321 atacctagca ggccaacatc ggctataagt tttaattcca gctccagctc tctttctatt
     1381 ccgggttctc cgggttcaca aaactgagga gctctttttt gtgcagtagc gaaacggcag
     1441 ttgcctcgtc ctcctctgcc tcctttggca annnnnnnnn nnnntaaatc agcaataatt
     1501 ttatcatttt cagggtcttt aaccactgtg ccaagaggta cttttatata taaatctttt
     1561 ccgcctttgc catgctggga ctttggacgt ccgttttcac cgttttccgc tttaaatatg
     1621 gactggtact gaaagtccat aagtgttgtc atatcttcgt ctgcaacaaa ataaacgtca
     1681 ccgcctctgc cgccgtctcc gccggcagga ccgcctttgt ccacatattt ttcgcgtctc
     1741 catgcaacgg taccattacc gcccttgccg gaaagaattt ttatttttgc tttatctaaa
     1801 aacatagcca tagctataag gataacatga aaaaattaat caacgtagaa aaaatcttcg
     1861 ttttcatctt gataatcttc ccaaagggga attttttcat caagaatctt ttgtttttct
     1921 tctttgttat tatttttttc ttttgctctg gcttcttctt cttttttctt tttgatgatg
     1981 tttgcaacat tcatcattgc aagagaattc aatgttgcat tgagctgtgc acttctgtct
     2041 acaaattgag attcagcaaa ctgctgtcct tcttcttgca tttcctgttg gaaataatcc
     2101 atgccggggc tttgtctgtc gtcagctgtt tttgcagcgg tgccggagat gtcgccgctt
     2161 ttaaaattaa agccgccacc gattccgaaa aatccagctg aacgattgtc taccacttcg
     2221 aaatatctcc tgtgtttttc tctcttttgt tgatttaata tcaagacaca ctatacgctc
     2281 gatattattt taaaaccgca cataattttt ttttgctagg ttccgtatat tattttaaag
     2341 tatattaaca aatatttaca tccgtctttt gatgtaaata tgctacacgc ctagtattac
     2401 gagcattcta acaacagcat attgaataaa ctgcaacgca agtaatgcaa ttatgggtga
     2461 aaaatcaagc ccgcccattg gcgggatgat tctcttaaat ggttccaaaa atatgtcaga
     2521 aataaccgcc agtgatttaa aaggctgtga ataccagtca attgacggaa tccatgttaa
     2581 aaatattctg acaataatca gccaaaaata aacattaaat atgtcattta ctaaagctgc
     2641 aatactcatg ttaactcctg tcaggtttat actcttgagc ctgcaattgt ttttgcacaa
     2701 tcacaatgtg ttctttcaac aggaagcttt tcaataagat tgaacaataa agcttttaat
     2761 ttttcgttgt tgtcattaaa cactttaata acttctgcat gctgcacagg aggtacttct
     2821 cctacgagac ctgcatcata atctgttatt aatgagatgt tcaacgggca catatccatt
     2881 tcttttacga gataagcttc ggggaattgt gtcatgttaa taacttccca gccttgtgac
     2941 gtaaagaatt ttgattcgga ttttgtagag aatctcgggc cattgattac aaccactgta
     3001 cctgtttcat gtacagtaat acctaattct tttgctgttg caacagccag ctgtctcatt
     3061 tcttcgcagt aaggatttgc tgcactgacg tgtgtaacga ttggtccgtc aaaaaatgtt
     3121 gatttccttc cgtctgtcca gtcaacaaac tggtcacaga ttacaaaatg tccgggagca
     3181 acatgtgttt gaaggctgcc tgccgcacag ggagaaatca ctctttcaca tccgattgat
     3241 ttcattgccc atacatttgc tctgtaatta attaaatgag ggggtaatgt gtggtttctt
     3301 ccgtgtctgg gcataaaagc aactttatgc ttaccgattt caccgataaa tacactgtct
     3361 gacggtgcac catacggagt ctcaattctt acttcttcga tattatcaag gaatttataa
     3421 aaccctgaac caccgaatac acctatatct gctaattttt tattttgcat tttctctctc
     3481 ccgattaatt attttgtgtc ttattttacc tgtgtttggt cttgcatcca ttcatatgct
     3541 gtagcctggt catttacttt tgtggatgtt tcaggcactg tcatttttcc gtctttgaat
     3601 aatttgacca catatccatt ctttttgtca tcagaacatg ttggatcaac aatagcttct
     3661 aatgtaccgt ttgaatcaac attttgccat ccccagaaac aagcgccaat agatgtttta
     3721 aagttcattg ttgtatcgtt atcgcagttt acttcaccta ttgtgtttat ttggtcggca
     3781 aggaagtaac atactgcttt gggctgggtg aattttttgt cgcagccgtc ttcacaaacc
     3841 gttaattcgc ttcccttgtt tatgtaagaa gcttttgcag ttgaaagcgg ttttgctgaa
     3901 aaatctgcat tttcgtctgt atactggtca tattttgtgc tgtcattaat gatatccgca
     3961 ataacagtct ctatagcgtg atatgattta agaaataaaa ctttattttt atcagggttt
     4021 acacggttga ttgctctcag cattaaagcc ataactacgc ctataattgc taatgtcaat
     4081 aaggtttctg ccattgtaaa agcggctttt tttacatctt tattcattaa taactcctgt
     4141 tcttttttcc tgattatatt ctatattaat tcaaattgca aaaattaggc aatttttgaa
     4201 tacaaaatgt ttttatatat acaggtagta agataaggtt atttaactat ggtcaacgga
     4261 ttatctccat caaacattcc gtatcagggt ttccctgcaa atgctgtggg tgcaacacct
     4321 gtaacaaaag atattgcaag ctattgctat gatacacagc gtactaacat tgcaaaaact
     4381 tatcatcatt taacaagtga agataaacaa agttatacct ggccaatcat aggcgctgtt
     4441 gtgtcatttt tatcactgct tgccgttaca tcaatcaaac gcggcaaacc ctaatattca
     4501 gttggtgtgc aataaagcgc aagaaataca aaaaggttca taacttccgg tttttgggag
     4561 ttttgaattt ctgctaatcc ctgattgagc cccagtatac aggctgggca tgttgtcagt
     4621 attatatctg tatttttttc aatatagtgc tgtgctttga ctttggaaat ttttctcgag
     4681 atttccgaat tttgcaatgc aaatttgcct gaaaatccgc agcacttatc aaaatcttct
     4741 gcttctacat aagtgattcc atcaatattt ttaacaatat caataaaatc atagtcatca
     4801 tgacaaggtt tatgtacggc tattttcagg tttttgttac aaacaaattt tatcttttta
     4861 attaaatcaa caacagatat tgttttttcg cagacttttt gagcatttgg taatgttgca
     4921 taatctttgt atgttttaag cacctcttca cacgatgcac agtcagtcaa aatataatca
     4981 aagtcacaat ctattttttc taagtttatg tttgcaattt ttataaaggc atcaatgttt
     5041 ccgtcattga gatagcttac tccgcagcat tcaaaatctt ttttaatcaa ctctatattt
     5101 gcattgttta atattttttt tacagcgttt tcggtttgtt tatttatata tttgttaaag
     5161 cagccttcaa agtacactgc cttttgcatg ttgtttttgt tgtggggtgt tgtgcgttga
     5221 ttgtattgtg tgtgagcaag ggaattaagt aaaaccaatc ttttgccggg caggcctgtt
     5281 tttagaatat atttttcaaa cttttttatt atcttatcca tacgcaaaaa tctgtatact
     5341 gaaaagaata taaaagcaca gcacaatgca gttttaaaaa gcacatagga attaacaatc
     5401 ttttctttta aagagatttt gttgttcttg taatactgtg cttttgctgc aataaaaatt
     5461 tcttttgcat ttattttgct agggcaaaaa tccttgcaag cattgcaacc tgtgcataaa
     5521 tcaagataag atttaatttt tctatttaat gaaagctctc cttttatgac tccgttgagc
     5581 atgttaaatt tgcccctgga gactgcgcac tcgtttacag aagctttaaa aacagggcaa
     5641 acaaactggc ataatccgca tctggagcat ttgtaaatat cttcttcata atctttaagg
     5701 ttgttcatga taattattat attcacaaag aattatttag tgatagaatt tttatattgt
     5761 tagggataga gaattttttt atgagaacag cagttgcaga aaatcaaaaa atttccatac
     5821 aagaaagacc acaaccacaa ttaagtgatt ttggcaatta cggagcagtt gttaaggttc
     5881 tgggctgcgg gttatgcggt tcagatattg taaaattttt gcacgatccg tcagagaaag
     5941 ttcttggaca tgaagttgtg ggcgaaatag tagatttgag acctaaattc atgtctaaat
     6001 tcaaaatagg ggataaggtt gtgctcgggc accatgttcc gtgtatgaag tgcgattatt
     6061 gcgacaacaa aaattattct atgtgcagac agtttaaaga aacaaatatc aggcctggcg
     6121 ggtttgctga gtatatttat gtttcacctt tgcatttaaa aaatacagtt tttaaggttc
     6181 cttcaaatct tgatgatatg gaaatatctt ttatggagcc gcttgcttgt tgtataagag
     6241 cagttgaaag agcagaagta aaaaagggtt ctacctctct ggtnntaggt cttgggtcaa
     6301 taggtcttct tatgggacaa gctgtcaaag cctttaaagg agatgtaatc ggttgcgacc
     6361 ttatcgagga gcgtgttgcg cttgcaaaca acctgaattt tgatgcttct ataaaatttg
     6421 aagacaacga tacaacagct gcaaagataa aagaaatgac ctgtgatttg ggagccgata
     6481 ttatttttat gacatcaggc tctgacaagg ctatagagtt tgcgctcaaa tctgtaagag
     6541 acggcggcac gattctggtg ttttcttctg taccaaatga tacagccggt tatacaaaca
     6601 atgatattta ttacagagag ttaaaaattc taggcagcta ttctcnnttc tccttcgcct
     6661 gccgatcttg cgcttgctca caagcttctt gctaagaaaa aagttgtagt aaaatatctt
     6721 tcaacagctt atcctcttga ggagctggcc gaagcgattc aagacactat gtcgaataaa
     6781 acattaaaag cttatataaa aatagataaa aacaataaag aataataaat aaacatgaaa
     6841 aagatgaaag ctataagata ctatgctcct caggatataa gatacgaaga ggtagacata
     6901 caacaacctg gtgacaacga agtactggtt agaattcagg ctgctttgac ttgcggtact
     6961 gatgttaaaa cattcagaag aggccatcct gttttaataa aaaaaacacc atccggtttc
     7021 gggcatgaat ttgccggtat tgtggaacaa gttggtaata acgtggttga ttttaaacct
     7081 ggtgacaggg ttgttgctgc taattctgca ccgtgcggca aatgctttta ttgccttaaa
     7141 aagcagtata acttatgcga aaatcttgac cttttaaatg gtgcatacgc agaatttatc
     7201 actgtacctg aaaggatagt tcaaaaaaat cttttaaaaa ttccaacagg tctgagtttt
     7261 gaaaaagctg cttttgctga acccctcgca aatgttgttc atggcgttga aagaacaggt
     7321 attcaaccct gggatactgt gggggttgtt ggtataggtc ctattgggct tatgtttgca
     7381 cgtcttgcaa aactaaaagg agcaaatgtt attgctgcgg gaagaaatcc tctaaaactg
     7441 aaactggcta aggattttgc aaatgcagat gaagttattg atttgaaaaa gtatcaacat
     7501 ccggaaaaga tttttaagtc ttttacacaa gatggaagag ggctggatgt agctgttgag
     7561 tgtgtcgggc tgcctgaaat atgggaaaag atgttttctc ttgtaagaaa gggcggcaag
     7621 gtgcatcttt ttggcggatg caagtctgga accactgtaa atcttgacac aagacgtttg
     7681 cactatgacg aagtacagat tataagtgtg tttcatcata ctccgcagta ttttagacag
     7741 gcacttgatt tgatagctga cgggcatgtc gatgttacaa aacttataac aaaaacaatg
     7801 ccgctttcac aggcaaaaga ggctatttta gcccatgaac gcggtgatgc aataaaagtt
     7861 ttgttaacac cttaattcaa atgttaagtt ttattgaaat caaattagtt gtctaaaata
     7921 cactaattat cacggttttg tccttttgtt catgaaaaag gtgtattgaa ttgtaaattt
     7981 aatatggtac actagcaagt aatgagattt acgaacttca tacaattgtg aaacgtagat
     8041 taagttgcta agacttgcga aagagaacaa tgatacattt acagacgaca acggtaaata
     8101 atgttcccgc ctccaaggat atgaaatcca aggattataa cagccatttc gggcatgccg
     8161 tgcagtcatc actccctttg tattctaagg acatgtattt tgactcattg attaagtcta
     8221 atgaatttaa aaaatataat aattttaata agaagagcgc taaagatatt tcatttagcg
     8281 ctcttccttt atctggtgtg gaaaaaataa aaaactccgg catgtggaaa ttgtttaatc
     8341 aaaaatggat aagcaaattt attgcaaaag cggattccag ccaaacaatc tttgatgcta
     8401 tttttgctct ggcaattact tgtgtattca gaccagctgc aattatggct cagtcgtccg
     8461 aaaaaacaaa gaaaaaagat atgaaagctg cagaacattc aatttcctca ggtttgatag
     8521 gatatggttt tgctatttta gttttttctc caattaaaaa agctctggat aaaataaaag
     8581 ctcatcctga acattttgct aaaaaagctt ctgctttctt taaatacgca gacaaaaata
     8641 tgaacaaatc aatgagctct tcaaaacgga tgcaaacata cacaatgctt ttcaataaaa
     8701 cagctgaaat tttaacagcc agtttccgtt ccggcttgac tataggcatg attccttata
     8761 tagaccaata catttttaca ccgctgctgg gcacaaaagc tacggaagaa acaaaaaaag
     8821 aattgcagaa tcctgtgtac aaattttctg ttataaactt caaaaataat caggagacaa
     8881 ataaagtgtt tcaaaacttt acgggggtaa tgaaataatg aaaattaatt catac
//
LOCUS       DABS01000155           12799 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_10552, whole genome shotgun sequence.
ACCESSION   DABS01000155 DABS01000000
VERSION     DABS01000155.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 12799)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 12799)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12799
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            30..1136
                     /locus_tag="CPT85_06840"
     CDS             30..1136
                     /locus_tag="CPT85_06840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015471266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="DAB22067.1"
                     /translation="MADKITQESSVEVTGTVKKHDRSRIGYEIDATDVKVIGESVDYP
                     ITPKEHGTHFLMEHRHLWLRSLRQKAILRIRHRIIKSVRDFFDNKGFTLVDAPIFTPN
                     ACEGTTNLFKVDYFDENAYLTQSGQLYMEAAAMAVGKAYCFGPTFRAEKSKTRRHLTE
                     FWMVEPEVAFFDIYDDMDLAEEFVEYIVQEVVKHNREDLEVLERDISKLENIKRPFPR
                     ISYDEAIEILHKKGNDTPWGTDFGGDEETLISEEFDRPVMIHHYPMAIKAFYMKQEGD
                     KAACVDMIAPEGYGEIIGGGQREEDIDKLKAKIKEQGLPEEVFDWYLDVRKYGSCKHA
                     GFGLGIERTVAWICGLHHVRETIPFPRLMDRIRP"
     gene            1249..2133
                     /locus_tag="CPT85_06845"
     CDS             1249..2133
                     /locus_tag="CPT85_06845"
                     /inference="COORDINATES: protein motif:HMM:PF00480.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22054.1"
                     /translation="MFEKFRIGVDIGGTNVKIALVDKKGEISHPKTVPTRAEMGYEYT
                     ISNITQCIKDLMKEAGIDRSAIEGIGFGFPGQIDCDNGIVRILPNIPGWIDVPIAEIM
                     QKEFNVPVKVDNDVRCMALAELNYGAGAGCKNLICITVGTGIGSGLVINGKLVRGASN
                     AAGEIGHIKMEMHNGLICGCGDTGCFEAYASGPAIVAMAKDYVKGGKSAKFREIAGST
                     GAITPAIVCQAAQEGDVVAKKIFERMGEYLGIGLSSVVNLLNPEKIVIGGGVADAGDI
                     LFEPLKRTLKDXXFRVLL"
     assembly_gap    2112..2113
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2298..2831
                     /locus_tag="CPT85_06850"
     CDS             2298..2831
                     /locus_tag="CPT85_06850"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22055.1"
                     /translation="MIESVSKALKAGSDNIKRIKISDDIEMKLPREVISKKSKALIKK
                     TEELLLEQMEKLRKQKAVPGKYIELSKYHKKEAATVTVRPLYNSVSFEDSILVEIKKP
                     NSTEVINISRRNPEKFRYEKMVPTQNGHATTNSYDSKRQSNETMETKVDNLIQEYLQI
                     FFPQTKLNRYIIHSDLM"
     gene            2842..3660
                     /locus_tag="CPT85_06855"
     CDS             2842..3660
                     /locus_tag="CPT85_06855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001254382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family rRNA
                     (cytidine-2'-O)-methyltransferase"
                     /protein_id="DAB22056.1"
                     /translation="MAKNKERLDKILTDKGFFETKSKAQGAIMAGDVKINDEVITKAG
                     YLLELKDNTRIEIKSLPFVSRGGLKLDKAVKAFDIDLKGRVCLDAGASTGGFTDCMLQ
                     NGAKYVYAVDVGYGQIAWKLRSDERVKVVERTNIKNCEPSEIYDETDILPDFCAMDLS
                     FISVTKVLENIKKLMDKDKIEIVTLIKPQFEAGKELVGKNGVVREKSTHYKVIQDVIN
                     YAQTLDLYPEKLTFSPIKGPAGNIEYLVKLVNHKTDFESDLINKIVEEANENNF"
     gene            3677..4645
                     /locus_tag="CPT85_06860"
     CDS             3677..4645
                     /locus_tag="CPT85_06860"
                     /inference="COORDINATES: protein motif:HMM:PF12850.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22057.1"
                     /translation="MAADKKKKSLLSRIVYWAVFVVCVYFGVSALSYAEPLKFAQISD
                     VHLSDKTVDTSYKVLSHTPELFKDEIEQINSVPHIDFVIVTGDLIDKPKKTLLEQACK
                     QMNKLKAPWYFVFGNHDAAVGTSFKKDKYFDFVKKHNKNMKFDNFYYSFSPKKGYRVI
                     VLDATIDNKITATGYLPQEQLKWLDCELVDCQTNGQIPLIFLHHPLREPFPSFHHRIT
                     NASEFYDVINSHKMPMAIFSGHYHATKIYKEGNILHVSTPSLATYPNAFRIVTVNNLK
                     NKVVFTFDFRETNLKEVQKKAKMLTFSSSTLAGEESDQNTIVVLDK"
     gene            4672..5538
                     /locus_tag="CPT85_06865"
     CDS             4672..5538
                     /locus_tag="CPT85_06865"
                     /inference="COORDINATES: protein motif:HMM:PF12706.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="DAB22058.1"
                     /translation="MRDTKGKFIVKFRGVRGSHPTPDFNFLEYGGNTACIEVNVNGHL
                     IILDAGTGIIKCGNELLKEYVAQFHKEPVNATILLSHVHNDHIQGLPFFKPLHMKDSN
                     INIVGFSEYEEGLDSVISDLVFDKSFPLGLNDLNSKISFYDINDNYALIFNEDDDTPD
                     MVKIENDEDYIPEGEEVVISCLKSNSHPKQGVMIYKIAYKDKSLVYATDTEGYVGANK
                     KLVLFARDTDLLIHDAQYTSEEYLNAYFSKQGYGHSTFDMALETFSQAKAKSLAFFHF
                     DPNYNDEXXIFT"
     assembly_gap    5523..5524
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5667..6140
                     /locus_tag="CPT85_06870"
     CDS             5667..6140
                     /locus_tag="CPT85_06870"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22059.1"
                     /translation="MEVFNIDAQRNAVEHNNRGVIYMQDRYXXQMAVLLDPNTQASSV
                     YYANLANCYMKIGYPALAQDTLQRAIKLNPMNFGLYQDLAVVYKRLGIGSQKIKTYKK
                     ESEKNPLAQVMVGMILMEQGKTDEGLAKLQEFAYTEPDLIITKXXXIDEHTKEKF"
     assembly_gap    5748..5752
                     /estimated_length=5
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    6102..6109
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6225..6638
                     /locus_tag="CPT85_06875"
     CDS             6225..6638
                     /locus_tag="CPT85_06875"
                     /inference="COORDINATES: protein motif:HMM:PF00581.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese"
                     /protein_id="DAB22060.1"
                     /translation="MRHEEIWKAAQDAGKAKDFFKAKLAHTIGPDRLKHLIDKHLDEF
                     NLIDVRKYEDYIKGHIPYAVHIPYDQMEDQLVKLSKDKVNILYSYSFLCQLSQKAAYM
                     LADKGYPVMEVIGGFKGWKKRDFDIVENDESDYPG"
     gene            6789..8012
                     /locus_tag="CPT85_06880"
                     /pseudo
     CDS             6789..8012
                     /locus_tag="CPT85_06880"
                     /inference="COORDINATES: protein motif:HMM:PF00675.18"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    7978..7986
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8099..9721
                     /locus_tag="CPT85_06885"
     CDS             8099..9721
                     /locus_tag="CPT85_06885"
                     /inference="COORDINATES: protein motif:HMM:PF05193.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22061.1"
                     /translation="MTYSKVSENSQLLNNLIGNALLDDDLAYVENYLPILDSITAADI
                     SAFAKKYLDLNKASLSVVHPENLEDTSIMANYQNANKKFDVRLSQMTPSANVNTVSFK
                     GRLEDKMMDLSKVKQYKLANNMEIVLNPNKSDISTSEIVLQTTQPADVKPAVPAILSV
                     ILNEGSKDKNYDAFYKDVYKAGMSLKFDADFQSVSANVTSLASDTGMAIDLIKEVFEQ
                     PRFSEKSFNYAKELVREAVSNIDASASEIASNALFPNLTEFATKEQVLASIDEITMDD
                     VKSFFNYIKQNAMAKGVFTAPFEKNPNLENAVVSKLSAGLGDFKEFSTEHFKSFAPVA
                     QNQVLTKAQQRNQADIIQAYKFKTNYNPKDHAVFTLLNTILGGGPSSRLFEDLREKQK
                     LAYRVESNIDFVGDTGVVSLGIKTTTDNPSENIQQYDNVKKSLDGFKNHIEKMKNELV
                     TPQELEAAKLMIKTKLLNSIETSDSQTAVLNSSKDSLNGIATVNDSLKLIDEVSAQDI
                     QNAAKYIFSGNSITSILASRKTLDNMNLPETV"
     gene            complement(9704..10306)
                     /locus_tag="CPT85_06890"
     CDS             complement(9704..10306)
                     /locus_tag="CPT85_06890"
                     /inference="COORDINATES: protein motif:HMM:PF13181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22062.1"
                     /translation="MAEEYFKKALFIDDKMVETYINLADIYYKENRLWDAIDLLQGAI
                     ALVSDNAALRHYLARIYIEDKRYDDAIDALDSVLELAPKNYDANWDLGMVYFELGDYD
                     SAIANFEEVLNYIEDNELIFYPTALAYEANDEIDKAISNLLKSIAVNDKFPLGYKRLG
                     MLFMARGDMEDAKEYYEEYLKFDIPQEEKEQIQNILNRLG"
     assembly_gap    10368..10369
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(10545..10823)
                     /locus_tag="CPT85_06895"
     CDS             complement(10545..10823)
                     /locus_tag="CPT85_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006625445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin"
                     /protein_id="DAB22063.1"
                     /translation="MTKNEIEIYTLPTCPFCIKAKEKLKDNYLDYTEYDISQNEEDIR
                     KMLAELFDIPTGRATVPQVVINGKHVGGXGYTELKELINSGKLNDYLN"
     assembly_gap    10607..10608
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(10875..11414)
                     /locus_tag="CPT85_06900"
     CDS             complement(10875..11414)
                     /locus_tag="CPT85_06900"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22064.1"
                     /translation="MSANVTKIHYYAKINALLKIPEFIMDEKHLILEQYRIYNEMKES
                     FINRSFMINRFFMIFSAVFLFSLIFAKMIMPSQFFLLLGLEIFGIASCIMWISNQDAY
                     STIIKIKYNAVIEKLEEDLPKAPNKDEYKELTDKRSNKRIILVKDIQKWFAILLMLVF
                     LANTLVDIANALLSHILNA"
     gene            11473..11805
                     /locus_tag="CPT85_06905"
     CDS             11473..11805
                     /locus_tag="CPT85_06905"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22065.1"
                     /translation="MIQSVNTVSSNTNCCGTKRKQSFGRTDSEYKQPSKAGRLAAYTA
                     TQFAAGAVVSGIFDGMTNLYRKVAKNKDLLKLKEMGVRAGFTGACFAVIGLVFTAIGA
                     MMAKKHKD"
     gene            11807..>12799
                     /locus_tag="CPT85_06910"
     CDS             11807..>12799
                     /locus_tag="CPT85_06910"
                     /inference="COORDINATES: protein motif:HMM:PF04909.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22066.1"
                     /translation="MQLLLILEIYMMKVTRSKNISFKGKIIDAHTHVGKWGQALYSQN
                     DLDIFIKSPLDGGDVIEKMIVSNLSCIEPEGILDEMQGNKQLLEIAKNNPKIAPLAVC
                     QPNITNGDTTLIERLFKENPDSFMGLKFHPKSMQLSASDRAYDSYLDFAHKHNLPCLF
                     HSDRTFDVDYGQGNIVKRCEYSRPDQIYELAKRHKDVPVILGHMGGNTGNNTKAAVDI
                     MVESIENNSAKLYADISWVNADTTEKPDIIEAIKRLKNTSKGDKTDRLLFGTDAPIGR
                     FGANGENGLKPREAYQKVVTDVKNAIKNAFSQKEADELIEKIFYKNADNLFFSKS"
BASE COUNT         4257 a         2359 c         2565 g         3588 t
ORIGIN      
        1 agggcaatgt ctctgatgaa gtttttgctc tggcagataa aattacacag gaatcttctg
       61 ttgaagtaac aggcaccgta aaaaaacacg accgctcaag aataggttat gaaattgatg
      121 ctacagacgt taaagtaatc ggcgaatctg ttgattatcc catcacacca aaagagcacg
      181 gcacacactt cttgatggaa caccgtcatt tgtggcttcg ttctttaaga caaaaagcaa
      241 tcttgagaat ccgtcacaga attatcaaat ctgtccgtga tttctttgac aacaaaggat
      301 ttacacttgt tgatgcgccg atttttacac caaacgcctg cgaaggtaca acaaacctgt
      361 ttaaagtaga ctactttgat gaaaacgcat accttacaca aagcggacag ctttatatgg
      421 aagcggctgc aatggcagtg ggcaaggcgt attgcttcgg cccgacattc cgtgctgaaa
      481 aatccaaaac aagacgccac ttaacagaat tctggatggt agagcccgaa gttgctttct
      541 ttgatatcta tgacgacatg gatctggcag aagagtttgt tgaatacatt gtgcaggaag
      601 ttgtaaaaca taacagagaa gatctcgaag tgcttgaaag agatatctca aaactcgaaa
      661 acatcaaacg tccgttccct cgcatatctt atgatgaagc tattgaaatt cttcacaaaa
      721 aaggcaacga cactccatgg ggaacagatt ttggcggtga cgaagaaaca ttgatttcag
      781 aagagtttga cagacctgtt atgattcacc attacccgat ggcaattaag gcattctata
      841 tgaaacagga aggcgataaa gccgcatgtg ttgacatgat tgcaccggaa ggctatggtg
      901 aaatcatcgg cggcggccag cgtgaagaag atattgataa actcaaagca aaaattaaag
      961 aacagggctt gcccgaagaa gttttcgact ggtatcttga tgtaagaaaa tacggaagct
     1021 gcaagcacgc gggatttggc cttggtattg aaagaaccgt tgcatggatt tgcggtttgc
     1081 accatgtaag agaaacaatt ccgttcccga gactcatgga cagaatccgt ccgtaatcag
     1141 gtttttaagg acagaatttt tggcggggta atttttgccc cgccatttta taattttttt
     1201 gctcgtgata ttataaacac agttacagag aatatttggg gattaattat gtttgaaaaa
     1261 ttcagaatag gcgtggatat aggcggtact aatgtaaaaa tcgctcttgt tgataaaaaa
     1321 ggcgaaattt cacatccaaa aaccgtacct acccgtgctg aaatgggtta tgaatataca
     1381 ataagcaata ttacgcagtg cataaaagat ttgatgaaag aagccggcat tgacagaagt
     1441 gctattgaag gtatcggctt tggtttcccc ggccagattg actgcgataa cggcattgta
     1501 agaatcttgc ctaatatccc cggatggatt gatgttccaa tagcagaaat tatgcaaaaa
     1561 gagtttaatg tacccgtaaa agttgacaac gatgtacgct gcatggctct ggcagagctg
     1621 aactacggag caggtgcggg ctgcaaaaac cttatctgta taacagttgg tacaggtatc
     1681 ggttcaggcc ttgttatcaa cggaaaactc gtgcgcggtg cgagcaatgc tgccggagaa
     1741 atcggccata taaaaatgga aatgcacaat ggcctaatct gcggctgcgg cgacacaggc
     1801 tgttttgagg cttacgcatc aggccctgca attgtggcga tggcaaaaga ctatgtcaag
     1861 ggcgggaaaa gtgcaaaatt tagagaaatt gcaggctcta caggtgcaat tacacccgca
     1921 attgtgtgtc aggctgctca agaaggcgat gttgttgcta aaaagatttt tgaaagaatg
     1981 ggcgaatacc tcggtattgg tttatccagc gttgtgaacc ttttaaaccc cgaaaaaatc
     2041 gtaattggcg gaggggttgc agatgccggt gatattttgt ttgaaccttt gaaaaggact
     2101 ctaaaagaca gnntattcag ggtgctgctg tgagcgttgt acctgctcaa ttgggtaata
     2161 ctgccggatt gataggtgca agcctcttga ttgacaatta gaaaatatta tttacttttg
     2221 taaacaaaaa attacctttg tagcaaaaaa atttgtttta gtattttatt cctctcatca
     2281 aagaaaggaa taatattatg atagaatccg tgtcaaaagc tctcaaagca ggtagtgaca
     2341 atataaaacg cattaaaatt tcggatgata ttgaaatgaa gcttcccaga gaggttattt
     2401 ccaaaaaatc caaggctctt attaaaaaaa cagaggagct gcttttggag caaatggaaa
     2461 aattgcgtaa acaaaaagct gtgccgggta aatatattga attgtcaaaa tatcacaaaa
     2521 aagaagctgc aacagttact gtaagacctt tatacaacag cgtttctttt gaggacagta
     2581 ttctggtaga aatcaaaaag ccaaattcta cagaggttat aaatataagc cgaagaaatc
     2641 ctgaaaaatt cagatacgaa aaaatggttc cgactcaaaa cggacacgct accacaaact
     2701 cgtatgacag caaaagacag tcaaacgaaa ctatggaaac taaagtcgac aatttgattc
     2761 aggaatactt acaaatattt ttcccacaaa caaaattaaa tagatatatt attcacagcg
     2821 accttatgta ataatacttc tatggcaaaa aataaagaac gtttggataa aattttgacg
     2881 gacaaaggct tttttgaaac aaaaagcaaa gcgcaaggcg caatcatggc cggcgatgtc
     2941 aaaattaatg acgaagttat tacaaaagct ggttatcttc ttgaactcaa agataacaca
     3001 agaatcgaga ttaaatcgct gccttttgtt tctcgaggcg ggctcaagct ggataaggcc
     3061 gtaaaagctt ttgatataga tttaaaaggc cgtgtatgcc tggatgcagg agcgtcaaca
     3121 ggcgggttta cggactgcat gctccaaaac ggtgcaaaat acgtttatgc agtggatgta
     3181 ggctacgggc aaattgcatg gaaactgcga agcgatgagc gggttaaggt tgttgaaaga
     3241 acaaacataa aaaactgtga accatctgaa atatacgacg aaactgatat tctgcccgat
     3301 ttttgcgcaa tggatttgtc ttttatttct gtcacaaagg tgctcgaaaa catcaaaaag
     3361 ttgatggaca aagacaaaat agagattgtc actctaatca aaccccagtt tgaagcagga
     3421 aaagagcttg tgggaaaaaa cggcgtggta agagaaaaaa gcacccatta caaggttata
     3481 caagatgtta taaactatgc tcagactctt gatttgtatc cggaaaaact tacattttcg
     3541 cccataaaag gccctgccgg taatatagaa tatttagtca aacttgttaa tcataagacg
     3601 gattttgaat cggatttaat aaataaaatt gtagaagaag ctaacgaaaa taatttttaa
     3661 gcgaggattt ttgtatatgg cggctgataa aaagaaaaaa agtttattaa gcagaattgt
     3721 gtactgggca gtttttgttg tgtgtgttta ttttggcgtg agcgcgcttt cttacgcaga
     3781 acccttaaag tttgcacaga tttctgatgt gcatttgtcc gacaaaaccg ttgacacaag
     3841 ctacaaagtg ctctctcaca ctcccgagct ttttaaggat gaaatagaac agataaattc
     3901 tgtgccgcat atagattttg ttattgttac gggtgatttg attgacaagc cgaaaaaaac
     3961 actgctcgag caggcatgca aacagatgaa caagctgaaa gctccgtggt attttgtatt
     4021 cggtaaccat gacgctgctg tcggtacttc gtttaaaaaa gacaaatatt ttgattttgt
     4081 aaaaaaacac aataaaaaca tgaagtttga caatttttat tactctttca gccctaaaaa
     4141 aggctacaga gtaatagtgc tggatgctac aattgacaac aaaattactg caacagggta
     4201 tctgcctcag gagcagttga aatggctgga ttgtgagctt gttgactgcc agacaaacgg
     4261 ccagattcct ttgatatttt tgcatcaccc tttgcgtgag ccctttccga gctttcatca
     4321 caggataaca aatgcttctg aattttacga tgtaataaat tctcacaaaa tgcccatggc
     4381 tatttttagc ggacattacc atgcaacaaa gatttataaa gaaggaaata ttctgcatgt
     4441 cagcacgcct tctctggcca catatcccaa tgctttcagg attgtgacgg ttaacaatct
     4501 taaaaacaaa gttgttttta catttgattt tagagagaca aacctcaaag aagtacaaaa
     4561 aaaggccaaa atgctgacat tttcatcttc taccctggca ggagaagaat ccgaccaaaa
     4621 cacgattgtg gttcttgata aataggttat aataaaaatg gagttttaat aatgagagat
     4681 acaaaaggca agtttatcgt taaattcaga ggcgtcagag gcagccaccc gacaccggat
     4741 tttaattttc tggaatacgg cggcaacact gcgtgtattg aagtaaacgt caacggccat
     4801 ttgattattc ttgatgcggg tacaggtatt ataaaatgcg gcaacgagct tttgaaagag
     4861 tatgttgcgc agtttcataa agaacccgtg aatgcaacca tacttttaag ccacgtgcat
     4921 aatgaccata ttcaggggct tccgtttttt aaaccgctcc atatgaaaga ttcaaatatc
     4981 aatattgtag gattttcaga atacgaagag gggcttgaca gcgttatttc agaccttgtt
     5041 tttgacaaat cattccctct cgggctcaat gatttgaatt ccaaaataag tttttatgac
     5101 ataaacgata actatgctct catttttaac gaagatgatg atacgcccga catggttaaa
     5161 atcgaaaacg atgaagacta tatacccgaa ggcgaagaag ttgttataag ctgcttaaaa
     5221 tcaaactctc accccaaaca gggcgtgatg atttataaaa ttgcttacaa agacaaatca
     5281 cttgtttatg caacagatac agagggctac gtgggtgcaa acaaaaaact cgtgcttttt
     5341 gcaagagaca ctgacttact catccacgat gcacagtaca caagcgaaga atacctcaat
     5401 gcatattttt caaaacaggg ctatggccat tctacgtttg acatggcatt agagaccttc
     5461 tctcaggcaa aggcaaaatc gcttgcgttt ttccattttg acccgaatta taacgacgaa
     5521 ttnngaattt ttacttgaga tagaaaatca ttatactgaa aattgtaaga actgttttat
     5581 cccaaaagaa ggtcaggaaa ttgtacttcg ttaaaacact tttagcttta tgtcttgtta
     5641 tggttccact atgcgcacag gccaagatgg aggtctttaa tattgatgcg cagagaaacg
     5701 cagtggagca taacaaccgc ggtgtaatct atatgcaaga cagatatnnn nntcaaatgg
     5761 ctgtactttt agaccctaat acacaggcca gctctgtata ttatgcaaac cttgccaact
     5821 gttatatgaa aatcggctac ccggcacttg cacaggatac tctgcaaaga gcaatcaaac
     5881 taaacccgat gaatttcggg ctttatcagg atctggcagt tgtttacaag cgtcttggca
     5941 taggcagcca aaaaattaaa acctacaaaa aagaaagtga aaaaaatccc cttgcgcagg
     6001 taatggtagg aatgattttg atggaacagg gcaaaacaga tgagggtctt gcaaaacttc
     6061 aggaatttgc atacacagag cctgatttga ttattacaaa annnnnnnnt attgacgagc
     6121 acaccaaaga aaagttttag ataaaaaatt atagccgttt tgtcgaatga aaaaccggcc
     6181 ggtttccttt aaattgtgga tggaaaaatt taaaggagaa tcaaatgaga cacgaagaaa
     6241 tttggaaagc tgcccaggat gccggtaaag ccaaagattt ttttaaagca aaactggcac
     6301 acactatcgg ccctgacagg ttaaaacacc ttattgacaa acatcttgat gagttcaatc
     6361 ttattgacgt aagaaaatac gaagactata tcaaaggcca tatcccttat gctgtgcata
     6421 ttccatatga ccagatggaa gaccagcttg ttaaactttc taaggataag gtaaatattt
     6481 tatacagcta ttctttcctt tgccagttga gccagaaagc tgcttatatg cttgctgata
     6541 aaggttaccc tgtgatggaa gttatcggcg gttttaaagg ctggaaaaaa cgtgattttg
     6601 atattgtaga aaacgatgaa tcggattatc ccggttaagt cttctgctgc tttttgatac
     6661 aaaacaggaa tcctgcgggg ttcctgtttt tatgttaaga tttttttaaa attgtgttac
     6721 atgacgttat ttttaagcaa ttttttaatt ttgagggttt ataaacatta aggaagcatt
     6781 aaaaacttat gaagttggat ggtcttaaac taaacaataa tatacaaacg cctgtgcaag
     6841 gcaatgtgcg aaataacgtt tcaaatgcta tagaaaatca aactctgacg gcgccgacac
     6901 agattgactc tcaacgggtt gagggtgcaa cctcaagcgc tgcttcaaat ccaataaaca
     6961 ataaagcagc tgaaacgtta aaagcacagg tgcttgcaca ggctcctatt tcatattcgt
     7021 atgtgagaga tattaagctt ccgttttctc ctcctgcaaa gctttttaaa ctggcaaacg
     7081 gccagaaagt agctgtgctt gagaaaaaag gtcctactgt tcttgaaaca tactacaacg
     7141 tcggctctat gaacgagcct gatgataaaa gaggcatcag ccattttaat gaacacatgg
     7201 cgtttaacgg ctcaaaaagc cccaccggcg gagggctcaa agccggagac tttttcagaa
     7261 ttgtcaatga actgggtgct attacaaatg cttccacagg tttttcgcag accaactact
     7321 ttgtaacatc gcagctttta ggcaaaggca atgtttttga ttcaacagct tatatccagt
     7381 cggaacagct tcagtatcct gaacatactg ccgaaatggt ggaaaaagaa aaaggccctg
     7441 ttacttctga aatcagcatg gttggtgacc agagcgagaa tattgcattg aataactgtg
     7501 taagaaacct ttttcaaatc caatcaactt cgtctgattt agtagcgggt tctatttcca
     7561 atataaacaa actcacaaga aaagacacgc ttgactatta caacctgtgg tacactccgg
     7621 acaactgtgc aaccgttgtt actggcgagg ttcctgctgt tgaagcaata aatacaattg
     7681 caaaatactt taacaaaagt gcttatgttc ctgttcaaaa cagaaaatat caggaattta
     7741 acggtataca aaaacctgtc agggttgatg taaaaatgcc aaaagcccag tcaagcattt
     7801 ttgcactcgg ttttgcaggg ccaaaaaaca attccaccaa agaaaatatt gagatggaag
     7861 tgcttatgac atcacttctg ggttacaaaa acgcaagaat cagcagagca ttgaataaaa
     7921 ttcaatccag cgcaatgatg aacatcgaaa gagtgggcaa ccgtccaaca gaccccannn
     7981 nnnnnntaca cctcaaaaga cagaagatgt aataaaaaca gtctacgctg aaataaacaa
     8041 gctttcacaa aaaccgctta cacaagaaga gctcgacaca gccaaaaaga ttttgaaaat
     8101 gacatattca aaagtgtctg aaaactcgca gcttttaaat aatttgatag gcaatgcgct
     8161 tttggatgat gaccttgcat atgtggaaaa ctatcttccg attttagaca gcataacagc
     8221 tgctgatatt tcagcttttg caaagaaata tctggatttg aacaaggcct ctttatctgt
     8281 tgtgcatccc gaaaatttag aagacacatc tatcatggcc aattatcaaa acgcaaacaa
     8341 aaagtttgat gtaagacttt ctcaaatgac tccgtcagca aatgtaaata cagtgtcttt
     8401 taaaggccgt ctcgaagaca agatgatgga tttgagcaag gttaagcagt acaagcttgc
     8461 aaataacatg gagattgtgc tcaaccctaa caagtctgat atttctacat ctgaaatagt
     8521 tttgcaaaca acacaaccgg ctgatgtaaa acctgctgtg cccgcaatac tttccgtgat
     8581 tcttaacgaa ggctctaaag acaaaaacta tgatgctttt tacaaagatg tttacaaagc
     8641 cggcatgtct ttaaaatttg atgcggattt tcaatccgta agtgcaaacg ttacttctct
     8701 tgcatcagac acaggcatgg caattgacct tatcaaagag gtttttgagc agccaagatt
     8761 cagcgaaaaa agctttaact atgcaaaaga gcttgtcaga gaagctgtct caaatattga
     8821 tgcttcagct tcggaaatcg catcaaatgc tctgttccct aatctaacag agtttgcaac
     8881 taaagagcag gtgctcgcat ctattgatga aataaccatg gatgatgtaa aaagcttttt
     8941 taattacata aaacaaaacg ctatggcaaa gggcgttttt acagctcctt ttgaaaaaaa
     9001 tcctaatctt gaaaacgcgg ttgtttcaaa attgtctgcc ggattaggtg actttaaaga
     9061 attcagcaca gagcatttta aatcttttgc acctgttgct caaaatcagg ttttaacaaa
     9121 agcacagcaa agaaatcagg ctgatattat tcaggcatac aaatttaaaa caaactacaa
     9181 ccccaaagac cacgcagtgt ttacactgtt aaacacaatt cttggcggag gaccgtcatc
     9241 tcgtcttttt gaagatttga gagaaaaaca aaaactggct tacagagtag aatccaatat
     9301 tgattttgtc ggcgatacag gcgttgtgtc tctcggtatc aaaacaacta cagacaatcc
     9361 gtcagaaaat atacaacaat acgacaacgt aaaaaaatcg ttggatggat ttaaaaacca
     9421 tattgaaaaa atgaaaaacg agcttgttac tccccaagag cttgaggcag caaagcttat
     9481 gattaaaaca aaactcttaa attccattga aacatcagac tctcaaacag ctgtgctaaa
     9541 cagttcaaaa gactctttaa acggtattgc aacggttaat gacagcctaa aactcataga
     9601 cgaagtgagt gctcaggata ttcaaaacgc cgcaaaatac atctttagcg gaaattctat
     9661 tacctcaatt cttgcaagcc ggaaaacgct tgataacatg aatttacccg agacggttta
     9721 agatattttg tatctgttct ttttcttcct gcggaatgtc gaacttgagg tattcttcat
     9781 aatactcttt tgcgtcttcc atatcaccgc gcgccataaa cagcataccc agacgcttgt
     9841 agcccagcgg gaatttgtcg tttacggcaa tactttttaa aaggtttgat attgctttgt
     9901 cgatttcgtc attagcctcg taagcaagag ctgtcggata gaatatcagt tcgttgtctt
     9961 caatataatt taaaacttct tcaaagttag caatggcgct gtcataatca cccagctcaa
    10021 aatagaccat tccaaggtcc caatttgcgt catagttttt tggagcaagc tctaagacag
    10081 aatcaagcgc atcaattgca tcgtcatagc gtttgtcttc aatataaatt ctggcaaggt
    10141 aatgtctcaa agcagcattg tcactaacaa gcgcaattgc tccttgcaaa aggtcgattg
    10201 catcccaaag gcggttttct ttgtaataaa tatcagcaag gttgatgtag gtttccacca
    10261 ttttgtcatc aatgaaaagc gcttttttaa aatattcttc ggccattgtt gtctggccta
    10321 gatgcgaata gcaaagccct atgttattgt ataggtgagg gtttttgnnt tgttatcctt
    10381 atcaagaagc tttttaaatt cttccatcgc accttcataa tctctttttt taaaaagagt
    10441 catagcgctt tcaagctgtg tatcaaagtt tttttcttcc ataaatataa atccgccttt
    10501 atcgctttgt catcgttatt atatttaatt atagacgaaa aaaactagtt tagataatcg
    10561 ttaagctttc cggaatttat gagctccttg agctctgtat aacctcnncc tccgacatgt
    10621 ttaccgttta tcacaacttg aggcacggtt gcacggcctg tagggatatc aaaaagctct
    10681 gcaagcattt ttcgtatgtc ttcttcattt tgcgagatgt catactctgt gtagtccaga
    10741 taattgtctt tgagcttttc tttagctttt atgcaaaacg gacatgttgg aagtgtgtat
    10801 atttcaattt cattcttagt catagtgcaa ttataccggc agacggcatc tgtttcattg
    10861 ccggaaggta taatctatgc atttaaaata tgagacaaaa gtgcattggc tatatccaca
    10921 agcgtgttgg caagaaaaac aagcatcaac agtatggcaa accatttttg tatatctttt
    10981 acaagaatga ttcttttgtt tgagcgtttg tctgtgagtt ctttgtattc gtctttgtta
    11041 ggtgcttttg gcagatcttc ttccagcttt tctataacag cattgtattt gatttttata
    11101 attgtggagt atgcatcctg attggatatc cacattatgc aagacgcaat gccgaaaatt
    11161 tcaagaccca gtaacagaaa aaactgcgag ggcataatca tttttgcaaa aatgaggctg
    11221 aataaaaaca ctgccgaaaa aatcatgaaa aatctgttaa tcataaaaga gcggttgata
    11281 aaactctctt tcatttcgtt ataaattctg tattgctcga gtattaaatg tttttcgtcc
    11341 ataataaact ccggaatttt tagtaatgca tttattttag cataatagtg aatttttgtt
    11401 acatttgctg acataaatgg caaaaaaata ctttcaggcg ttttatactt gtaacaagta
    11461 aggagtgtaa aaatgattca atccgtaaat acagtaagct caaatacaaa ttgctgcggt
    11521 actaaaagaa aacagtcatt cggacgtaca gattccgaat ataaacagcc ttccaaagcc
    11581 ggaagattgg cagcttatac agctacacaa tttgcagcag gcgctgtagt gagcggtatt
    11641 tttgacggaa tgacaaacct gtacaggaaa gtagccaaaa ataaagattt gctcaagcta
    11701 aaagaaatgg gtgttcgtgc aggatttacc ggtgcttgtt ttgctgtaat cggtcttgtg
    11761 ttcacggcaa tcggtgctat gatggctaaa aaacataaag actaaattgc agcttttgct
    11821 tatattggaa atttatatga tgaaagtcac gaggagtaaa aatattagtt ttaaaggtaa
    11881 aattatcgac gctcacacac acgttggaaa atgggggcag gctttgtatt cccaaaatga
    11941 ccttgatatt tttattaaat cgcctcttga tggcggagat gtgattgaaa aaatgattgt
    12001 gtcaaacctg agctgtatcg agcccgaagg cattcttgat gaaatgcagg gaaataaaca
    12061 gcttttagaa attgcaaaaa ataaccccaa aatagcacct cttgccgttt gccagcctaa
    12121 tattactaat ggtgatacaa cgctgattga aagactattt aaagaaaatc cggacagctt
    12181 tatgggtctt aagttccacc ccaaaagtat gcagttgtct gcgtctgaca gggcatatga
    12241 ctcttatctg gattttgcgc acaagcataa tctgccttgc ctttttcatt cagacagaac
    12301 atttgatgtt gattacggcc agggcaatat tgtgaaaaga tgcgagtatt ccaggcctga
    12361 ccagatttat gagcttgcca aaagacataa agatgtccct gtaatactgg gccatatggg
    12421 cggcaacacc ggaaacaata caaaagctgc cgttgatatt atggttgaat caatagaaaa
    12481 taattccgct aaattatatg ctgatatatc ctgggtaaat gcagatacaa cagagaaacc
    12541 ggatattatt gaagctataa aaaggttgaa aaatacatca aaaggtgata aaacagacag
    12601 gctattattt ggcactgacg cgccgatagg cagatttggc gcaaacggtg aaaacggcct
    12661 gaaacctcgt gaagcttacc aaaaagttgt gactgatgtc aaaaatgcta taaaaaatgc
    12721 tttttctcaa aaagaagcag atgagttaat agaaaaaata ttctacaaaa atgcagataa
    12781 tttgtttttt tctaaatca
//
LOCUS       DABS01000156           17667 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_1509, whole genome shotgun sequence.
ACCESSION   DABS01000156 DABS01000000
VERSION     DABS01000156.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 17667)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 17667)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17667
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..1130
                     /locus_tag="CPT85_06915"
     CDS             <1..1130
                     /locus_tag="CPT85_06915"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22035.1"
                     /translation="FPVIARSYSIIPLLVFVLALLYPHYKKKPFLYALLLFLTANTHV
                     IMLGLCTLLSLDFLYCAVLKEDDKPVRKRNIFAFLIMASGMIAVVAQLALTMQSNAVI
                     GMHTLTLWGSCVKVFTQFFLNDVDNQWAEPGSFSFAPYTITAALISVVLYIALFVLLF
                     KKNKKIFAIGFLAVLFQLLIYIAGYNHWIFVNRIFCAHLVLIFCFWIVLNKNDRLINI
                     LLSLFFTLTVFNGLKYAVLDIHNPYSGAKETAEFIKNNIDKDNSVIVTDNPPYAVGVV
                     YYLNGKNSIYCAQQQKNISYVVWDKSLLFILDSSKWPEYARFVMQNEPDFKNKKLYAL
                     VPFFDADKFDVDKIDNFKLIFESKPSMVKLEGFRIYEYLNN"
     gene            1190..1516
                     /locus_tag="CPT85_06920"
     CDS             1190..1516
                     /locus_tag="CPT85_06920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012596120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="DAB22036.1"
                     /translation="MKIHVLAKIKEDIMSIRPLGDKLVIKVIEDTEQTSGGIFIPDSA
                     KEKPQKGEVVAVGPGKTLDDGKKEEMEVKVGEKVLFAKYAGTDVKMGDETFKIMSVKD
                     VLGVLE"
     gene            1674..3303
                     /gene="groL"
                     /locus_tag="CPT85_06925"
                     /pseudo
     CDS             1674..3303
                     /gene="groL"
                     /locus_tag="CPT85_06925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020861279.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
     assembly_gap    1772..1773
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3497..3745
                     /locus_tag="CPT85_06930"
     CDS             3497..3745
                     /locus_tag="CPT85_06930"
                     /inference="COORDINATES: protein motif:HMM:PF01381.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="DAB22037.1"
                     /translation="MELDKQELIKVLGHYLKSLREQKGTSLNIFAYENDLTTATVSRI
                     ENGLVDTKFSTLIKYAKGLEIPLEHIIMNLDIDYSNDN"
     gene            complement(3748..4599)
                     /locus_tag="CPT85_06935"
     CDS             complement(3748..4599)
                     /locus_tag="CPT85_06935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012655931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="DAB22038.1"
                     /translation="MKKNIMNIIVMTLGAMIAAFSLEGFLIPNKIIDGGILGIAIMTN
                     YKTQFPLGWCIFILNLPFIFLALQKMGKAFVAFTFYAVTVLSIGVSLMPVWLNHKHVS
                     DPFLACIFGGLILGAGVGLVLRSNSSLDGTEILSISLSKKWGFSVGEIIMFFNLFIFT
                     AAGFVYGNWQSSMYSMISYFIAYRVIDIVIEGLNESKSVRIITEKHTDIGNAIMEHFD
                     ISVTYLKAKGGYSGAEKKIIFCVINRLEIAKLKQVIKNIDESAFITIENVHEVDGGRV
                     KKHHHHI"
     gene            4782..6062
                     /locus_tag="CPT85_06940"
     CDS             4782..6062
                     /locus_tag="CPT85_06940"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22039.1"
                     /translation="MSVCKFNYKYIKDKATPGSWRRGYEGYQKDIVMSYDTKLAGVDA
                     KVKGNFKDAYETSLTFTKNGVKADCSCPLKEEWCKHAIAVGLKVIEDKVYDEYLERVH
                     KIKPEYPDEFVPPLEHPTGRYVFHFNPKRRQNFFSILVMDRETGKVIRDLEAILRAII
                     EVQRNDKSFILNDEEKIEIAIFQLLLQRSRLDKKAGWYDVPINKFDGFFQLLSRAEEV
                     LDGKTKERLRFDDKEWELALSVNFSMVGNVLLSLTWERPDGSDSYPFEEIRYFSRQLK
                     WGRYKNVIFPTNTPVSALPQNLIKASFTDVKDADGAKFLYEELPKLQKAMKVTVSEAI
                     EKLFLEQKPPVNIVTLGLDYDGSLKAELEFEYDGTRVPYSKHTEKTPYVTIKKPKEDL
                     LYWVKRNPVHEEQAYQMLLACKFAPXHADKQPCT"
     gene            5986..7962
                     /locus_tag="CPT85_06945"
     CDS             5986..7962
                     /locus_tag="CPT85_06945"
                     /inference="COORDINATES: protein motif:HMM:PF00176.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22040.1"
                     /translation="MKNRLIKCCLRVSLHPXMQTNNLALEKENAIDFYNYYIQQAGDG
                     WKFEEKDDMSFFKLTKDPFELCADIDFSINSTDSFEVELYGRVGEEIIPFDDLYSQTL
                     DNSKYVRIKNLGFAEIPTMDIYSLMRAFNTFDVYKNDENKYIVKTYRAGLMSEMENLG
                     MKIKMSRKFSKFWKQISTFSTMDVPSLPKGINAEFREYQTRGFGWLWFMYQYGLNGIL
                     ADDMGLGKTLQALALIQKAKEKNKKAPNLVICPTSVVFNWENEIEKFAPGLSCLKLSG
                     TERKELFKEIPKYDVVITSYALVRRDIAKLKKHEFRYVILDESQNIKNAESMTAQSVK
                     QLNCKHKLALSGTPIENRLEELWSIFDFLMPGFLFDKNEFNYRYVTPIMEREDKTVEK
                     RLKSQIYPFILRRMKRDVAKDLPDKIENVAYCELTPEQKDFYMEVMDSTREELFKSIE
                     EKGIEKSRMSIFSALLRLRQICCHPRLYDKENIKGIKESGKFEQLKVMLEEIIAEKHR
                     VLLFSQFVDMLDIVKEWLTKAGIKHEYLTGSTKDRQEVVERFNSDPTIPIFLISLKAG
                     GTGLNLTGADYVIHYDPWWNPAVEDQATDRAYRIGQTKKVFVYRMITKGTVEEKIQKL
                     KSRKRDLVDSVISVDRNIGKSLTYEDLKDIFSLD"
     assembly_gap    6034..6035
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(7959..9296)
                     /locus_tag="CPT85_06950"
     CDS             complement(7959..9296)
                     /locus_tag="CPT85_06950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013450649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22041.1"
                     /translation="MENILNLIHTHALAISTTILIVAYIFIAWEKISKVTVAMIGAAI
                     TLMLGLLAQSKGHEAAIDPHYFINFVDFNVIFLLVSMMIIVSIASKSGIFTWIANALL
                     KKTKGHPVKILLVLGFFTAVASAFLDNVTTVILVVPITFLVAKYLDINPLPYLITEIL
                     ASNIGGTATLIGDPPNIIIGSKAGFTFMTFLMELTDIVLLILIVTLFILWLCFRKDLV
                     AAKDKMEAVAHLDNSKTITDKALAIRSGVVLSLVILGFVLHDLIHIESHVIALAGASF
                     LMIFESPKRVLNGVEWNTIFFFIGLFIIIGGFEAAGGIKIMAQWILDVTKGNESAAAM
                     LILWASGILSGIVDNIPYTATMAPMIYQIQLVEGAQYAHPLWWCLSLGACLGGNMTII
                     GAAANVIVSETAAAHGKPIPFMKYLKYGALITFVSLVMSSIYIYFRFLIHAGH"
     gene            9434..10891
                     /locus_tag="CPT85_06955"
     CDS             9434..10891
                     /locus_tag="CPT85_06955"
                     /inference="COORDINATES: protein motif:HMM:PF07690.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="DAB22042.1"
                     /translation="MGLLEFFKEPPAAEPIKDEEQIKKTYSHFRLRMFYSCFIGYAMF
                     YLCKKNIAAALPSMSKELGYSNLELGVIGSSLYFTYAIGKFVNGMIADRSDVRKFLPT
                     GLILAGLANICFALSFFVFTPGKFTFFGLPSATILLWVLAFFWGCNGWFQSMGFPPVA
                     KSLTYWFSNSERATKWAMWSTSHQTGTFLAVILSGFVIAKFGWQAAFYIPGTLAILVA
                     LWMFNRLRDKPQTIGLPDVEEYREPERAKETAKTEDEDDGMTYIQILVKNVLTNKAIW
                     ALAMAYVFVYVIRFGTEDWIIKYLVEAKDNTLELASMKLACLPLFGFFGTISAGVISD
                     KVFKGARAPINVIFLLGVIVCMTGLYFNGTGPNFIDGAFLALTGKSLVDVIKINGSGV
                     IDILLIGFSGFFTYGPQMLIGGVCAIESSSKKVASAVTGFTGTFGYVGAMLSGLGTGL
                     VVDKFGWNGALAFWGVSALICALICLPMCFKKKCA"
     gene            complement(10971..11192)
                     /locus_tag="CPT85_06960"
     CDS             complement(10971..11192)
                     /locus_tag="CPT85_06960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016321330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="DAB22043.1"
                     /translation="MVTNKTTKLQKLAQNIKSLRESKKLSQMALAVKLGISREHLAKI
                     ETAKRGLSLDLLFNLAEVLGVSEQEFFKF"
     assembly_gap    11366..11380
                     /estimated_length=15
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <11381..12530
                     /locus_tag="CPT85_06965"
     CDS             <11381..12530
                     /locus_tag="CPT85_06965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006619964.1"
                     /note="produces methionine from
                     2-keto-4-methylthiobutyrate and glutamine in vitro;
                     mutations do not affect methionine salvage in vivo
                     however; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="DAB22045.1"
                     /translation="PPYLFAEIDRKIAEAKAKGHEIISLGIGDPDTPTIPSVVEAMHR
                     AIDNPKNHDYPPYNGTADFRKASCDWMKKRFGVELNPDTQMLANIGSKEAIAHIFFAF
                     VDEGDYTLVPDPGYPVYKNATIFAGGTPYSMPLKAENGFLPDFDAIPEEVAKKSKLMF
                     LNYPNNPTAAVADKEFFKKAVDFCKKYDILLCSDMAYSEMTYDGYKAPSVLEVEGAMD
                     CAIEFYSHSKSYNMTGWRVGFVCGNEQAVKALGTIKNNIDSGTFKAIQEAAIEAYNAP
                     EEQIEKLNQMYKERKEVMEEGLRDLGWKVEPSKATFYLWLPVPEGFTSEEFVTVMLEK
                     AHVVVPPGNGYGKCGEGFFRIALTRPVEEIQEALRRMKRAGISYKMTK"
     gene            complement(12583..12903)
                     /locus_tag="CPT85_06970"
     CDS             complement(12583..12903)
                     /locus_tag="CPT85_06970"
                     /inference="COORDINATES: protein motif:HMM:PF12844.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="DAB22044.1"
                     /translation="MNYQRLITSGIKRLREKNNLTQEVFAEKVGLTAQGLSNLERNKY
                     QPTAETIDTICKAFKIHPLDLLTDYPEDIEKDEQLTQITAILKTYSKDELNKLYKILK
                     VLKD"
     gene            13161..13991
                     /locus_tag="CPT85_06975"
     CDS             13161..13991
                     /locus_tag="CPT85_06975"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017471068.1"
                     /note="catalyzes the formation of spermidine from
                     putrescine and S-adenosylmethioninamine; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine synthase"
                     /protein_id="DAB22046.1"
                     /translation="MRYCELSKDGFGCCMTVKQTLFSGQSEFQKVDIFDTESMGRVLT
                     LDGLMMTTERDEFYYHEMISHIPMMSHKNPESVLVIGGGDGGTIREVLKHDTVKKVVL
                     CEIDGMVVDACKKYLPTIGCELDNPKVEVKIEDAIEFIKDKKACYDVILIDSTDPMGP
                     GEGLFTEEFYTNVKEALKQGGIMAAQSESPFINQAEMKKMYPLLRKVFPIVDTFTGPI
                     PSYPGGYWSWCFCSETVSPFDYLDEERAEKITKQCKIYNKEYHIARFALPNFVKELTK
                     "
     gene            complement(14206..17568)
                     /locus_tag="CPT85_06980"
                     /pseudo
     CDS             complement(14206..17568)
                     /locus_tag="CPT85_06980"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02811.17,HMM:PF14579.4"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
     assembly_gap    14258..14259
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    16337..16367
                     /estimated_length=31
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         5394 a         3440 c         3668 g         5113 t
ORIGIN      
        1 ttttccctgt tattgcaaga agttacagca ttataccgct tttggtgttt gtgcttgctc
       61 ttttgtatcc tcattacaag aaaaaaccgt ttttatatgc actgcttctg tttttgactg
      121 ctaacacgca cgttattatg ctcgggctgt gcactctttt gtcgctggac tttttgtatt
      181 gtgcggtttt aaaagaagat gataagccgg ttagaaaacg taatattttt gcatttttaa
      241 tcatggcatc gggcatgata gcggtggttg cgcagctggc tttgacaatg caaagcaacg
      301 ctgtaatcgg tatgcatacg ctgactctat ggggaagctg tgtaaaagta ttcacccagt
      361 ttttccttaa tgatgtggac aaccagtggg cagagccggg tagtttttct tttgcgcctt
      421 acaccatcac tgcagctttg atatctgtag ttttatacat tgcgcttttt gttttgttgt
      481 ttaaaaagaa caaaaagatt tttgcaatag ggtttttggc tgtacttttt cagctattga
      541 tttatattgc ggggtataac cactggattt ttgtaaacag aattttttgt gcgcatctgg
      601 ttttgatatt ttgtttttgg attgtgctca ataaaaacga caggttgata aacatattgt
      661 tgagtttgtt ttttactctc accgttttta acgggctcaa atatgctgtt ttggatatac
      721 ataatcccta ttccggcgca aaggagacag cagagtttat taaaaataat atagataaag
      781 acaattctgt gatagttacg gacaacccgc catatgcggt tggagttgtg tattatctaa
      841 acggcaaaaa cagtatctac tgcgcacagc agcaaaaaaa tataagttat gttgtgtggg
      901 acaaatccct gttgtttata ttagacagca gtaaatggcc cgagtatgcc aggtttgtta
      961 tgcaaaacga gcccgatttt aaaaacaaaa agctctatgc acttgtgccg ttttttgatg
     1021 cagacaaatt cgatgttgat aaaattgaca attttaagct tatttttgaa tcaaaacctt
     1081 caatggtaaa gttggaagga ttcaggattt atgaatattt aaataattaa tttttcatta
     1141 atatttgaaa atttcttata atcaaatgat ataaaagtat agtaagttaa tgaaaataca
     1201 cgtattagca aaaataaagg aggacattat gtcaatcaga ccgttaggcg acaagctggt
     1261 aatcaaagtt attgaagata cagaacaaac ttccggcgga atttttatcc ccgattcagc
     1321 taaagaaaaa ccgcaaaaag gcgaagtagt agcagtaggc cccggcaaaa ctcttgacga
     1381 cggcaaaaaa gaagaaatgg aagttaaagt aggagaaaaa gtcctttttg caaaatacgc
     1441 aggtacagac gtaaaaatgg gcgacgaaac tttcaaaatc atgtctgtaa aagacgtttt
     1501 gggcgtttta gaataaggtg tgtgaaaccc gcaggggttc gagaattcga agcccggagg
     1561 gtgtaaccgt tccaggccgc cgttatggaa gaaacgaagt ttctgaaatg aagcaatctt
     1621 tgattgcaca ggcggaaata gattaaaaat tattcacaag gagagaaaat aaaatggcta
     1681 aaagaattgt attcaatgaa gaagctagaa aaagcttact caaaggcata gacgcagtag
     1741 ccgatgctgt aaaagtaaca ctcggaccaa annattttag aaaaaaaatt cggcgcacct
     1801 caaatcgtta acgacggtgt aacaattgca aaagaaatcg aactcgaaga cggtctcgaa
     1861 aacgctggtg cacaacttct taaagaagtt tcatcaaaaa caaacgatgt tgctggcgac
     1921 ggtacaacaa cagcttctgt tcttgcacag gctattgtaa gagaaggctt gagaaacctc
     1981 acagcaggcg ctaaccccat gggcatgaaa cgcggtatgg acagaggcgt tgaaatggct
     2041 gttgaaaaaa tcaaaaaaat ggctcaacct gttgattcaa aagaaaaact cgctcaagtt
     2101 gctacaattt ctgcaggcaa caatgctcaa atcggtgacc tgattgcaga tgctatggaa
     2161 aaagtaggta ctgacggcgt tatcactgtt gaagagtcaa aatctttcgg tacaaacctc
     2221 aaagttgttg aaggtatgca gtttgacaaa ggctacatct caccttactt tgttactgac
     2281 cctgaaagaa tggaagcagt tttggaagac gcttatgttc tttgcgtaaa caaaaaaatc
     2341 aacctcattg ctgaccttgt acctatactt gaacaggttg ctcgtgacgg acgttctttg
     2401 ttaatcatcg cagaagacgt tgaaggcgaa gctttagcaa ctcttgttgt aaacactatg
     2461 agaaaagtct taagagcagt tgctgtaaaa gctcccggat tcggcgacag aagaaaagct
     2521 atgcttgaag acattgctat cttaacaggc ggtgaaatgt tcacagaaga actcggtatc
     2581 aaactcgaaa acatcactgt tcaaatgctc ggtaaagcaa aacgcgttac tgtaacaaaa
     2641 gacaacacaa caatcgttgt tggtgacgaa aacaaagaaa gagtagctga cagagttaga
     2701 ttaatcaaaa aacaaatcga acagtcagat tctgaatacg acaaagaaaa acttcaagaa
     2761 agacttgcaa aactttcagg cggcgttgct gtaatcgaag ttggtgcagc tagtgaagtt
     2821 gaattaaaag aaagaaaatt gagaattgaa gacgctctta acgcaacaag agctgctaaa
     2881 gaagaaggta ttgtacccgg cggcggtgtt gctcttgtca gagtaatgca agaaatggct
     2941 aaatcattag atacttgccc ttacaattct gatgatgaaa aagtcggata cagaatcctt
     3001 cttgacgctc ttcacattcc tttgaaacaa atcgctgaca acgcaggcga aaaaggcgat
     3061 gttgtagttg aagaagttaa aaaacttcct gaagcagaag gttttgatgc tttgacaaac
     3121 gaatacgttg acatgttcaa agccggtatt gtagaccctg caaaagttac acgttcagta
     3181 ctcgaaaacg ctgtatcagt agcatctatg cttcttacaa cagaagctgc agttgtagat
     3241 attccgtcta aggaacctgc accggcaatg cctcctatgg gcggcggaat gggtatgatg
     3301 taagacgaaa agcgtcatca aatttcagct aaacaaaaac ccctttgttt ttacagaggg
     3361 gttttttgtt gcatattttt tcgaaattcc gaaataattt tgataaattt aatatccaat
     3421 tgagctaaac ggcaaatatg ataagagtta catatatgta atatgttaaa ttcaaaaata
     3481 aatataattt acgtatatgg aacttgataa gcaagagttg ataaaagttt taggccatta
     3541 tttaaagtca ttaagagagc aaaaaggcac atcgctcaac atttttgcat acgaaaatga
     3601 cttgaccaca gccactgtca gcaggattga aaacggactt gttgacacaa aattttcgac
     3661 gctcataaaa tatgcaaaag gtctggaaat acctcttgag catattatta tgaaccttga
     3721 tatcgattat tccaacgata attaacctta aatatggtga tgatgttttt ttactcttcc
     3781 accgtcaact tcgtggacgt tttctattgt tataaatgct gattcatcaa tgtttttgat
     3841 aacttgcttg agtttggcga tttcaagcct gttgattaca caaaagatga ttttcttttc
     3901 agcgcctgaa tatccgcctt ttgctttgag gtaagtaacg cttatatcaa aatgttccat
     3961 gatagcatta cctatatcag tgtgtttttc tgtgataata cgcactgatt ttgactcgtt
     4021 caaaccttca ataacaatat caattaccct gtaggcaata aaatatgaaa tcatcgaata
     4081 cattgagctc tgccagtttc cgtaaacaaa gcctgctgca gtgaaaatga acagattaaa
     4141 gaacataatg atttcaccaa cggaaaagcc ccatttttta gaaaggctta tggataaaat
     4201 ttcagtaccg tctaaagagg agttgcttct caacaccagc cctactccgg caccgagtat
     4261 caagccgccg aatatacaag ccaaaaacgg atctgaaaca tgtttgtggt tgagccatac
     4321 aggcattaaa gatacgccga ttgataatac ggtaaccgca taaaaagtaa atgccacaaa
     4381 tgctttaccc attttttgca atgcgaggaa tataaacggc agattcaaaa taaaaatgca
     4441 ccagccaaga gggaattgag ttttatagtt ggtcataatt gctataccca gaatcccgcc
     4501 gtcgataatt ttattcggaa tcaaaaaacc ttccagagaa aatgcggcaa tcattgcgcc
     4561 cagcgtcatt acgatgatat tcattatatt ctttttcatt taactatcat aacatatggt
     4621 tttgctttct tgcaataaag tattgttatt ttaaagattt cgtgtataat cttattagca
     4681 gttaataatt aaggtttttt ggctgctatg tttatttagg caaaagggtc gttggattaa
     4741 gtctttctct tttgtttgaa agatttttgt ttacataaaa tatgagcgtt tgcaaattta
     4801 attacaaata cattaaggat aaagctaccc ccggcagttg gagaaggggt tacgaagggt
     4861 atcaaaaaga tattgtaatg tcttatgata caaagcttgc cggtgttgat gcaaaggtca
     4921 aaggcaactt taaagacgcg tacgaaacaa gcctcacttt tacaaaaaac ggtgtaaaag
     4981 ctgattgcag ctgcccttta aaagaagaat ggtgcaaaca tgctatcgct gttggtctca
     5041 aggttatcga agacaaagtt tatgacgaat acctcgagcg tgtgcacaaa atcaaacccg
     5101 aataccctga tgagtttgtt cctccgttag aacaccccac aggcagatat gtttttcact
     5161 tcaaccccaa aagaagacag aattttttct ctatccttgt aatggacaga gaaacaggca
     5221 aggtaataag agacctcgag gctattttaa gagctattat cgaggtgcag agaaacgaca
     5281 aatcttttat tttaaacgac gaagaaaaaa tagaaatagc tatattccag cttctgctcc
     5341 agcgctcaag gctggataaa aaagcaggct ggtatgatgt accgattaac aaatttgacg
     5401 ggtttttcca gctgctctcg cgcgcagaag aagtgttaga cggcaaaaca aaagaacgcc
     5461 tgcgctttga tgacaaagaa tgggagcttg ctctgtctgt taacttctcc atggtgggca
     5521 atgtgttatt gtctttgacg tgggaaagac cggacggcag cgactcttac ccgtttgaag
     5581 aaataagata cttttcaaga cagttaaaat ggggaagata caaaaacgta attttcccga
     5641 caaacacacc ggtttcggcg ctgcctcaaa accttattaa agcgagcttt acagatgtaa
     5701 aagatgctga cggtgcaaaa ttcctttacg aagagctgcc aaagctgcaa aaggctatga
     5761 aggtaactgt ttcggaagct atagaaaaac tctttttaga gcaaaaaccg cccgtaaata
     5821 ttgttacact gggcttagac tacgacggtt ctttaaaagc agaactcgag tttgaatatg
     5881 acggaacgcg tgttccttac tcaaaacata cggaaaaaac accttacgta acaatcaaaa
     5941 aaccaaaaga agacttgctc tactgggtaa aaagaaaccc cgtgcatgaa gaacaggctt
     6001 atcaaatgct gcttgcgtgt aagtttgcac ccanncatgc agacaaacaa ccttgcactt
     6061 gagaaagaaa acgcaatcga tttttataac tactatatcc agcaggcagg agacggctgg
     6121 aagtttgaag aaaaagacga tatgtcgttt ttcaaactta caaaagaccc gtttgaattg
     6181 tgtgctgata ttgatttttc tattaattca acagacagtt ttgaagtgga attatacgga
     6241 cgcgttggtg aagagattat cccgtttgat gatttgtaca gccagactct ggacaacagc
     6301 aaatatgtga gaatcaaaaa tctcggcttt gccgaaattc ccacaatgga catatactca
     6361 cttatgagag cgttcaacac ttttgatgtt tacaaaaatg acgaaaataa atacattgta
     6421 aaaacatacc gtgcaggcct catgtccgaa atggaaaacc ttggcatgaa aataaaaatg
     6481 agccgtaagt tttctaaatt ctggaaacag atttcaacct tctccacaat ggatgttccg
     6541 agtttgccaa agggaatcaa tgcagaattc agagaatacc agacaagagg ttttggctgg
     6601 ctgtggttta tgtaccagta cggcctgaac ggaatccttg ccgatgatat ggggcttggt
     6661 aaaacattgc aggcgctggc gttgatacaa aaagcaaaag aaaaaaacaa aaaagcgcca
     6721 aaccttgtta tctgccctac ttccgttgtt ttcaactggg aaaacgaaat agaaaagttt
     6781 gcacccggtt tgtcctgtct caaattgagc ggcacggaaa gaaaagaact gtttaaagaa
     6841 ataccaaaat acgatgttgt aatcacaagc tacgctcttg tcagacgcga cattgcaaaa
     6901 ctcaaaaaac acgagttcag atacgttatc cttgatgaat ctcaaaacat caaaaacgca
     6961 gaatccatga cagcccagag cgtaaaacag ctcaactgca aacacaaact ggctctgtca
     7021 ggtacaccta tcgaaaacag acttgaagaa ttgtggtcaa ttttcgactt cttaatgccc
     7081 ggatttttgt ttgataaaaa cgaattcaac taccgctacg ttaccccgat tatggaacgc
     7141 gaggacaaaa cagtggaaaa acgtcttaaa tcacagattt atccgtttat cctccgccgt
     7201 atgaaaagag acgttgcaaa agaccttccc gataaaatcg aaaacgttgc atactgtgaa
     7261 cttacgcccg agcaaaaaga tttttacatg gaggttatgg actcaacaag agaagaactc
     7321 ttcaagtcca tcgaagaaaa gggtatcgaa aaaagcagaa tgtccatttt ctctgcgctt
     7381 ttgcgcctga gacaaatctg ctgccacccg cgtctttacg acaaagaaaa tatcaaagga
     7441 ataaaagaat ccggaaaatt cgagcagctt aaagttatgc tagaagaaat cattgccgaa
     7501 aaacacagag tgctgttgtt cagccagttt gtggatatgc tcgatattgt aaaagaatgg
     7561 cttacaaaag cgggtatcaa acacgaatac cttacaggca gcacaaaaga ccgtcaggaa
     7621 gttgtggaaa gattcaactc tgacccgaca attccaattt ttttaatcag cttaaaagca
     7681 ggcggtacgg gcttgaacct cacaggcgcg gattatgtaa tccactacga cccgtggtgg
     7741 aaccctgctg ttgaagatca ggcaacagac agagcctacc gtatcggtca gaccaaaaag
     7801 gtgtttgttt accgtatgat taccaaaggc acggtagaag aaaagattca aaaactcaaa
     7861 tcaagaaaaa gagacctagt ggactccgtt atctctgtcg acagaaatat cggcaaatca
     7921 cttacttacg aagacctcaa agacatcttc tcgcttgatt aatgtcctgc gtgtatcagg
     7981 aatctgaaat aaatataaat tgagctcatc acaagcgaca caaaagtgat aagagcaccg
     8041 tatttgagat acttcataaa cggaatcggc tttccgtgtg cagcagctgt ctctgataca
     8101 ataacgtttg ctgcagcccc gataattgtc atgtttccgc caagacaagc acccaaagac
     8161 aagcaccacc aaagaggatg agcatactga gctccttcta caagctgaat ttgataaatc
     8221 attggcgcca tggtagcagt gtaggggatg ttgtccacta tacctgacaa aattcccgat
     8281 gcccacaaaa taagcattgc cgcagcagac tcgttgcctt ttgtcacatc aagaatccac
     8341 tgtgccataa tttttatgcc gcctgcggcc tcaaaaccgc ctatgataat aaacaagccg
     8401 ataaaaaaga atatagtgtt ccattccaca ccgtttaaga cccttttagg gctttcaaat
     8461 atcattaaaa agctggcacc cgcaagcgca ataacgtgtg actcaatatg aattaaatca
     8521 tgcagaacaa acccgagaat aacaagagac agcaccacac cggagcgtat tgcaagggct
     8581 ttgtccgtaa tggttttgct gttgtccaga tgagcaacag cttccatttt gtcttttgct
     8641 gcaacaaggt cttttctaaa gcacagccac aggataaaca gagtgacaat aagaattaaa
     8701 agcacaatgt ctgttaattc catgaggaat gtcataaaag taaaccctgc tttgcttccg
     8761 atgatgatat tcggcgggtc gccgattagc gttgccgtac cgccaatgtt ggaggcaaga
     8821 atctctgtaa taaggtaagg aagcgggttt atatcaagat attttgccac aagaaacgta
     8881 ataggcacaa caagaataac tgttgtaacg ttgtctaaaa acgcagaagc aactgccgtg
     8941 aaaaatccaa gtacaaggag tatttttaca ggatggcctt ttgttttttt tagcagtgcg
     9001 tttgctatcc atgtgaatat gccgcttttg cttgcaatgc ttacaataat catcattgaa
     9061 acaagcaaaa atattacgtt aaaatctaca aaatttataa aataatgagg gtcaatagca
     9121 gcttcgtgtc cttttgactg cgcaagaaga cccagcataa gcgttattgc cgcccctatc
     9181 attgccactg ttacttttga tattttttcc caggctataa atatatatgc aactatcaaa
     9241 attgtggttg aaatagccag agcatgtgtg tgtataaggt ttaaaatatt ttccatagca
     9301 actccataaa ttataattta tccgatttta ccgtgattgt tgacggttgt aaacaactat
     9361 taaacttaaa ttgtaattgc agcttgtttt tgtgataatt tttttactgc gcacacaatt
     9421 agagagtgaa attatgggat tattggaatt ttttaaagaa ccgccggctg cggaacctat
     9481 taaagacgaa gaacaaatta aaaaaacata ctctcatttc agactgagaa tgttttattc
     9541 ctgttttatc ggctatgcaa tgttttatct ttgcaaaaag aatattgcag cagccctgcc
     9601 ttcaatgagt aaggaactgg gctattcaaa ccttgagctg ggtgttatcg gcagctcgct
     9661 ttactttact tatgctatcg gaaaatttgt taacggcatg atagcagacc gttctgacgt
     9721 aagaaagttt ttgcctacag gcttgattct agcaggtctt gctaatatct gctttgcgtt
     9781 gagctttttt gtatttacac cgggcaagtt tacattcttt ggcttgccta gtgcaacaat
     9841 tttgttgtgg gttttggcgt tcttctgggg atgtaacgga tggttccagt ccatgggatt
     9901 tccgccggtt gcaaagagcc ttacttactg gttttctaac tctgaaagag ctacaaaatg
     9961 ggcaatgtgg tctacatcac atcagacagg tacatttttg gccgtaattc tttcaggctt
    10021 tgttattgca aaattcggct ggcaggctgc gttttatatc cctggtactt tggcaatcct
    10081 cgttgctttg tggatgttca accgtttgag agacaaaccg cagacaatcg gacttcctga
    10141 tgttgaagaa tacagagagc ccgaacgcgc taaagaaact gctaaaacag aagacgaaga
    10201 tgacggcatg acatatatcc agattcttgt taaaaacgtt ttgacaaaca aggctatttg
    10261 ggcgctggct atggcgtatg tgtttgtgta tgttatcaga ttcggtacag aagactggat
    10321 tatcaaatac cttgtagaag caaaagacaa cacactggaa ctagcttcta tgaaactggc
    10381 ttgcctgcct ttgttcggat ttttcggaac aatttcagcg ggtgtaattt cagataaagt
    10441 gttcaaaggc gcaagagcac cgattaacgt aatctttttg ctcggtgtaa tcgtttgtat
    10501 gacaggtttg tactttaacg gtacagggcc gaactttatt gacggtgcat ttttggcact
    10561 gacaggcaaa tcgcttgtgg atgtgataaa aatcaacggc tccggcgtaa tcgatatttt
    10621 gttaatcggt ttttcaggat tttttacata cggcccgcaa atgctcattg gcggtgtttg
    10681 tgcaatcgaa tccagctcaa agaaagttgc ttctgccgta acaggcttta caggaacatt
    10741 cggctacgtg ggcgcaatgc tttcaggtct tggcacaggg cttgttgttg acaaattcgg
    10801 ctggaacgga gcacttgctt tctggggcgt atcagcattg atttgtgcgt tgatttgtct
    10861 tccaatgtgc tttaagaaaa aatgcgcgta atcgcataat tgtacaagcg cacaagcgtg
    10921 attaaactaa aaaacaaaaa ggtgaatcat tgattcacct tttttatttg ttaaaattta
    10981 aaaaattcct gttcagaaac cccgagtact tcagcaagat taaacagcaa atctaaactc
    11041 aaacctcttt tggcggtttc aatttttgca agatgttctc ttgatatgcc caattttact
    11101 gctaaagcca tttgtgaaag ttttttgctt tctctcaatg attttatatt ttgggctaac
    11161 ttttgtaatt ttgtagtctt atttgtcaca atattatttt agtgtataat taagtagagt
    11221 ttgtagccta aaagagaaca attatgaaag actatgacac aatttatgat tattctatag
    11281 aaaatatcaa acaaataaat atttatagag caatttcgtt atgctataat ctttttacag
    11341 aaaaatgcac aggagataaa agtatnnnnn nnnnnnnnnn cccgccatac ctgtttgcgg
    11401 aaatagacag aaagattgca gaagcaaagg ctaaagggca tgagattatt tctcttggca
    11461 taggcgaccc tgatacaccg actatcccgt ctgttgtgga agctatgcac agggcaattg
    11521 ataaccccaa aaaccacgac tatccgcctt ataacggaac agctgatttt agaaaagctt
    11581 cttgcgactg gatgaaaaaa cgctttggcg ttgaacttaa tcctgataca cagatgcttg
    11641 caaacatcgg ctcaaaagaa gctatcgcgc atattttctt tgcatttgtg gatgaaggcg
    11701 actacacact cgtgccggac cccgggtatc ctgtttataa aaacgcaact atctttgcag
    11761 gcggaactcc ttattctatg ccattaaagg cggaaaacgg atttttaccc gactttgacg
    11821 caatacccga agaagttgca aaaaaatcaa aactcatgtt cttaaactac cccaacaacc
    11881 ccactgcggc tgttgctgat aaagaatttt tcaaaaaagc agtagatttt tgtaaaaagt
    11941 atgatatttt gctctgctct gacatggctt attcagagat gacatacgac ggctacaaag
    12001 ccccgtcagt gctcgaggtt gaaggcgcta tggactgtgc tatcgagttt tattctcact
    12061 caaaatccta caacatgaca ggctggaggg taggttttgt gtgcggaaac gaacaggctg
    12121 ttaaggcact cggcacaatc aaaaacaata tcgactccgg tacttttaaa gctattcaag
    12181 aagctgcaat cgaggcttat aacgcacccg aggaacagat tgaaaagctc aatcagatgt
    12241 ataaagagcg taaagaggtt atggaagaag gcttgagaga cctcggctgg aaggttgaac
    12301 cgtctaaagc tacgttttat ttgtggctgc ctgttccgga agggtttaca agcgaagagt
    12361 ttgttactgt aatgcttgaa aaagctcatg ttgttgttcc gcccggaaac ggctacggta
    12421 aatgcggcga aggtttcttc cgtattgcgc tgacaagacc ggtggaagaa attcaagaag
    12481 cattgagacg catgaaacgc gccggcatca gctacaaaat gacaaagtaa caaagtaatt
    12541 ttagggttta gaaatttaaa gcggagaaaa atctccgctt ttttaatcct ttaaaacttt
    12601 tagtattttg tacaatttgt ttaattcatc ttttgaatat gtttttagta tggcagtaat
    12661 ttgagtcagc tgttcatctt tttcaatgtc ttcggggtaa tctgtcagca ggtcaagggg
    12721 gtgaattttg aaggctttgc agattgtgtc gatagtttct gctgtgggtt ggtatttgtt
    12781 gcgttcaaga ttagatagtc cctgtgctgt taggccaacc ttttccgcaa agacttcttg
    12841 agtaagatta tttttttctc ttagtctttt tatgcctgat gtaattaatc gttgataatt
    12901 catatattaa aaatatggta tttaaacaga taatttaatc gattaactgt ttagttttaa
    12961 atacataatt ttagctagcc acacacacaa caacaacagc acgtacccta cggggcagcc
    13021 tatcatgaaa acaaacacaa aaagttaatg tattttacgt ttatgtaaca ccttaattta
    13081 tttcatactt aatacaaaat ttttacatga tataatcata aacactaata gtttaaaaaa
    13141 ggaaaatcac tatgttggat atgagatact gcgaactcag caaagacggc tttggctgct
    13201 gcatgaccgt taaacaaaca ctctttagcg gacaatcaga gtttcaaaaa gtcgatattt
    13261 ttgatacaga atccatgggc agagtgctca cactcgacgg cctgatgatg acaacagaac
    13321 gcgatgaatt ttactaccac gagatgattt cccacatccc catgatgtcg cacaaaaatc
    13381 ctgaatctgt gctggtaata ggcggcggcg acggcggcac aatcagagaa gtgctcaaac
    13441 acgatacagt aaaaaaggta gtgctgtgcg aaattgacgg catggtagtg gatgcctgca
    13501 aaaaatacct ccccacaata ggttgcgagc tggacaaccc caaagttgaa gtcaaaatcg
    13561 aagacgcaat agagtttatc aaagacaaaa aagcctgcta cgacgttatc ttaatcgact
    13621 caacagaccc catgggcccc ggcgaaggtc tctttacaga agaattctac acaaacgtta
    13681 aagaagcgct taaacaaggc ggaatcatgg ctgcacaatc agaatcacct ttcatcaatc
    13741 aagcagagat gaaaaagatg tacccgcttt taagaaaagt gttcccgatt gttgacacat
    13801 tcacaggccc gattccgtca tacccgggcg gctactggag ctggtgcttc tgttccgaaa
    13861 ccgttagccc gtttgattat ctggacgaag aaagagcgga aaaaatcaca aagcagtgca
    13921 aaatctacaa caaagaatac cacattgcac gctttgctct tccaaacttt gttaaagaac
    13981 tgacaaaata gcataacgca ttcatcaata tgtgccaaac attgtcgcaa gacctctgcg
    14041 gcagatgaat gctgtcattt tgaagatttc tttgattttt gcaattagtc tttccatatg
    14101 cgtacccttt ccacacacat ggataatgcc cgaaatcgac aaattataaa caattattca
    14161 tccagagatt ttattgcaat gtctactttt tgagcaaagt tgttgttaac cgcataaaca
    14221 aggtcgtttg acgcttccac ccagaagtga gaatcgcnng tctttgccat ccggctcttt
    14281 gacgctcata acaagcgggt cgccgccttt aaaatgcgca agcacatcct tgagcccgac
    14341 aagctcctca aatttcatct cgtcttttaa agaaatggtc acaatactgc tgttgtccac
    14401 gggttttacg gaatcgacaa tgatattgta ctggtcttcg tcacgttttt ggactttgcc
    14461 tgataggatg accttttttt ctgactcaat aaacgagttg taatttatta gagttttgtg
    14521 gaacgccaca aactccactt tgcctgtcaa atcttcgata atccctgctt tgaggaattt
    14581 tgtggggtct ttttttgtcg gaatctgacg cacctgagtc aaaagtccgc aaatagtcac
    14641 aggcttgtcg tttggcatgt ccttgagctc tgcaatgttg tgcgttgtca aaaacggcag
    14701 cttgtcgata atgctcgaaa gcgggtggct tgttacgtaa aatccgagat attctttttc
    14761 aaacgcctgc acctgtttgt cgtcaaattc ctcatcgctg ccggtgagtg tgtatgtgtc
    14821 aaggtcaacg cccgtgcttg ttgtcattcc cgcaaaaagg ctggcttgcc caagcgattt
    14881 ggcttcgctc tggcgtttgg ctgacgcaat caggggttca aggttttcta ttaattgttt
    14941 tctgcttttt tcaatgttag aaaaagcgcc tgacttgatt aagctctcta aagtacgcgt
    15001 gttgtatgac ttgtagtcta ttcttgtaca aaaatcatac agggacttga attcaccctc
    15061 ttgagtttct ctttcttttt caattaattc aataacgcct tcccccacgt ttttgatgga
    15121 cgcaagcccg aagcggatgt tgtctccgtc aggtgtgaat tttgcgtttg atttgtttac
    15181 atcaggcgca agcactttta tgcccatttt ctggcattcg ccaatataaa gctgggtttt
    15241 ttcctgatcg tttgatacgc ttgataaaag agcagacatg tactcaacag gatagtgtgc
    15301 ttttaaatag gctgtttgat aagcaacaaa agcatacgct gcagagtggc ttcggttgaa
    15361 gcagtatgcg gcaaactgtt cgatttgttc aaagagtttt tctgcatctt tttggctcat
    15421 accgtgagag gctgtgtttt gtacaaacag tcctttttgc tcggccattt tgtctaactg
    15481 ttttttaccc atcatacggc gtacgttatc cgcttgcccg agcgagtaat ccgcaagggt
    15541 ttggaaaatc tgcatgattt gttcctgata aacgattgtg ccgtaggtat ctttcaagat
    15601 aggctcaagg tccgggtgag tgtattcaat tttctggcgg ccgtgtttgc gctgtacaaa
    15661 gtcgtccacc atccccgagt tcaatggccc gggtctgaac agtgcaacaa gagcgcctaa
    15721 gtcttcaaac acagagggct tgaggtcttt tacaagtttt ttcataccgg cggattctag
    15781 ctggaacacg ccgtctgtgt cgcctttttg cagcagttca aaagttgcct catcatcaag
    15841 cgggatgttg ttgatatcaa ctttttcgcc tgttcttttt tccaccattt tgagtgcatt
    15901 gtgaatgatg gtgaggtttc gaaggcccaa aaagtccatt ttcaaaaggc cgatgtgctc
    15961 gtcttcaatc attgtgtatt ctgttacaat caaaccttct tttgagggtt caacaggcac
    16021 aatgtcttct aacggcattt ttgagatgat tacaccggct gcgtgcatac ccgtgttgtt
    16081 tttgaggcct tcaatggctt ttgccatgtc cacgagcttt ttgactgtgg ggtctgtgtc
    16141 gtagagcttt ttgagctcca ttccatcttt taaagcgtca tcaatcttga ttttaggctc
    16201 ggcagggata agctgcgccc actggttgct ctgcgcaaac gggatatcat aaacccttgc
    16261 tacagacttc attgcgtttc ttgctgcaag tgtaccaaag gttacaatct ggcatacttt
    16321 gtctgcgccg tattttnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnncga catcaggcat
    16381 gcttacacgt tcggggttta agaatctctc aaacaacagg ttgtgacgga tagggtcaag
    16441 gtctgtgatt tcaagcgcgt aagaaacaag gcttcctgct gccgagccgc ggcccgggcc
    16501 tacggggatg tcgtttcttt ttgcgtagtg gataaagtct gatacgatta aaaagtactc
    16561 tgcaaacccc atcttgttga ttacaccgag ctcgtaatcc atacgttctt taagctcggg
    16621 tcttaaaccg ccataacgct ttttaatacc ttctaaagtc agatattcaa gataagattc
    16681 cgatgtaaag tttggcggga gttcaaaata cggaatgtgg tacttgccca tctcgataat
    16741 aagatggcac ttgtccgcaa cttccaccgt gtttttgata cattcttcga acatatccgc
    16801 ttccatccat ttgaaagaat cacggagctg ttcgggtgtt tttacataaa attcatcgtt
    16861 aggaaaacgg aacctgtctt gactttcctt gagcgcgtta gtctgaatac acaaaagtgt
    16921 gtcgtgccag tctgcgtctt cttttctcaa atagtggctg tcgtttgtga tgaccatttt
    16981 tatatcaagg tctttggcca gctggataag cccggggttg gacatttttt gtttttcaag
    17041 cccgtggtct tgcagctcga tgtagtaatc ttcaccaaac agccctttgt aaaactttgc
    17101 tgcctcgtaa gaagcctctt tgttgccttg aataaacccc tgtgcaactt caccctgaac
    17161 acacgccgaa agacagataa ggccttcgtg gtgtttttca attagttcat ggttgattct
    17221 gggtttgtaa tacatccctt tgcatttggc tgtggaaacc agttttacaa ggtttttgta
    17281 accagtctgg tcttttgcaa tcagcacaag gtgccacgga tgggtttttg ccgggttttt
    17341 ctctgttata tcaccgtcat agacgtaaaa ttcacacccg ataagaggct tgattcctgc
    17401 ggattttgct tcttcataca tctggatagc gccgtacatg ttgccatggt cagtgattgc
    17461 aactgcgggc atgtcgtttt ctttggcaaa tttgcacaac tcttttatac ggatagctcc
    17521 gtctaagagg ctgttttcgg tgtgtaaatg taagggtacg tattgcataa taaatattta
    17581 accatacaaa atgtttaatt tcagcagtat ttatagaaaa gtaaatttaa ttttgtaaag
    17641 aagtgttaac gaaaatcgaa aatatta
//
LOCUS       DABS01000157           10587 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15398, whole genome shotgun sequence.
ACCESSION   DABS01000157 DABS01000000
VERSION     DABS01000157.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10587)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10587)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10587
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            218..1198
                     /locus_tag="CPT85_06985"
     CDS             218..1198
                     /locus_tag="CPT85_06985"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21995.1"
                     /translation="MPIEGFDFKEFAKNLAQQVGPALPPDIADADKQYIINIVHNFCY
                     MAGEALSNDTSINFNAEQASIVTQFIGEWAFHKSIDVIRSGIDPQFRDGIMQKIAFTV
                     FEIAKTAIIKNMSQGDMIAVVEFQVKKAYTSALEELKEKGVLTEEQFNEAQSHSNIDE
                     MAQQAAAQEYQAQANGAAPSDNYVNQVSDNKILKLATFAIVLKHLPAEKRQGLLDKFS
                     EQDAAILRDYVNMDDLENKLDPVLIAKSLAEIKKSLPEPKKINPGRINQRLYNIVKNS
                     NISKISNIISKERKAVKDFVSAAGSGGKSDRLPPRVADIICNHLEEKLNR"
     gene            1224..1985
                     /locus_tag="CPT85_06990"
     CDS             1224..1985
                     /locus_tag="CPT85_06990"
                     /inference="COORDINATES: protein motif:HMM:PF02108.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21996.1"
                     /translation="MIIKRYSQKKIIKPQIQEELPAESAAPVQPEPVVEQQQAVQQEQ
                     EKQEDTSDIFAGFNFDEIDFNQRAERRRGDRRRGYRRIDDRNLISRAQQEAINIKEQA
                     SKEGFEKGLEEAHSAVNDLKDSLEEFFEYKDRLYEKISGDILDISLKVAEKIIKKEVE
                     SSKSVLDSIVHDALKSLAKDENKIILKVNPTDVEYTKEIVPKLLSSGQFEAKIFVSGD
                     KDVEEGSAIIETSNGVIDANISTQLDLIKEAFKQI"
     gene            1985..4081
                     /gene="flhA"
                     /locus_tag="CPT85_06995"
     CDS             1985..4081
                     /gene="flhA"
                     /locus_tag="CPT85_06995"
                     /inference="COORDINATES: protein motif:HMM:PRK06012.1"
                     /note="membrane protein involved in the flagellar export
                     apparatus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscV/YscV/HrcV family type III secretion system
                     export apparatus protein"
                     /protein_id="DAB21997.1"
                     /translation="MANAQNANPISEISLAVFVVCLILILLIEVPNWVINFSISLNIT
                     LGIVLLMISLYIQKPLELAAFPSIILIGTMFRLVLGIASTRLILAKGEAGEVIHAFGT
                     FVTGGNMVVGGVIFIIITIVQFMVITKGAERIAEVSARFALDAMPGKQMTIDADFNAG
                     LISPDEAVKRREDLQRESALFGSMDGAMKFVKGDTMAGIIIVIINIIGGLCIGMLQQG
                     MPAADAVAKYTILTIGDGLSSQVPSLLMAISAGIVMTRASAASPSLASDVAGQILSKP
                     MSLFCAVGFLILIALSSHWTGLPWLPFTFFAIVILIAAFSVLVNQDVQAQLGQLENVK
                     QNMQDLVNPNKMYERLGVDVLSLQVGSGLLPIADPDQEGQLLAKIAALRQRVTDELGY
                     IIPNIRIMDSSALDANEYLISIRGNKVATGFVYPGKLMVIADQWDATGKPTPTDSIVN
                     IDPTYQAQAYWVDPSQIDEEDHLTAVDSVDVIVTHLQECVRKYVDEVMTKTDVLKLME
                     LVKSQDPTLVNDLIPTIISTSDLRKIFVNLIREKVSIKDIIFIFERLCDYARFSKEPD
                     ILSERIRAALGRQICLSNCTEDKVLYALTLSSEWEKTLDDSCQRTELGTMFLLNPMQV
                     QELIETTASTLMRAHQTVGRQPVILCSPRIRLPLYQLLERHIPTIVVISYSELITDIK
                     VEAVDTIGEMYAPEYG"
     gene            4139..5447
                     /gene="fliI"
                     /locus_tag="CPT85_07000"
                     /pseudo
     CDS             4139..5447
                     /gene="fliI"
                     /locus_tag="CPT85_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002589293.1"
                     /note="involved in type III protein export during
                     flagellum assembly; frameshifted; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellum-specific ATP synthase FliI"
     assembly_gap    4794..4795
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5448..5864)
                     /locus_tag="CPT85_07005"
     CDS             complement(5448..5864)
                     /locus_tag="CPT85_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme"
                     /protein_id="DAB21998.1"
                     /translation="MTVYTEHFTINSRGFTDIIDITQKVKSAVYQHNLKNGNVVVALP
                     GSTASITTIEYEPGLIKDFPDILDKIVPMERNYHHDDTWHDGNGYAHVRAALIGSSVT
                     VPLIDGALLLGTWQQIVLIDFDNKPRSRNIYVQIIT"
     gene            complement(5864..6055)
                     /locus_tag="CPT85_07010"
                     /pseudo
     CDS             complement(5864..6055)
                     /locus_tag="CPT85_07010"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    5958..5983
                     /estimated_length=26
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(6063..6884)
                     /locus_tag="CPT85_07015"
                     /pseudo
     CDS             complement(6063..6884)
                     /locus_tag="CPT85_07015"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    6156..6166
                     /estimated_length=11
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7024..7956
                     /locus_tag="CPT85_07020"
     CDS             7024..7956
                     /locus_tag="CPT85_07020"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21999.1"
                     /translation="MIKPTMFDAFVNTMKKSHIAKQSARKAVAHAQQNAAKLEQTAQD
                     ILTKSGADAKVSFRVKSVDSTASKQIRYLKDFDTYENKRNDVLNIILGSGMGEIIGDS
                     YGMRFIYNAEKTKGKDTAKLIYDTMLDYAKNKKDFSVSVMENYFGNGIKPYADNSVMQ
                     NFAKLTYKNPRGQVCHTASVNAQKKSGYTRTNTNANIFGVNTEIQGGGKLTTLWGDVE
                     HFLYDVRMGKSPDLSKLTDEQKIIAKSIINDYKALTANNKQHEVFNKEYLSKIWGSLR
                     KSEIKGLDNPELPAFPQGFPDTLRAENIMKLAHV"
     assembly_gap    8086..8100
                     /estimated_length=15
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    8299..8300
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(8409..10076)
                     /locus_tag="CPT85_07025"
     CDS             complement(8409..10076)
                     /locus_tag="CPT85_07025"
                     /inference="COORDINATES: protein motif:HMM:PF02638.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22000.1"
                     /translation="MRTGTNEFGAEAIVIDNTVVQISGADSIIPKGGLVISGHGRAKN
                     WMNENLTVGTKIFIDYKNMTINSYLTNDSFIFATKEKIKEIDQMMRYYKDNDIYYDDS
                     IAHNYVTKALDNLKRANRHPEDTQKYSSMAITSANKAMQYALPYYKNEFKGVWLRPTE
                     KTPEDIEKTLDRVKKYGIETVFLETYYQGKTIFPSETFAKYGVQPQRPEFIGFDPLKI
                     WVEEAHKRNLKIYIWFETFYAGNENPMNNPMNVISVYPKWANVTKMKYNSPTPVASLS
                     EHNGYFIDPANPEVQTYLLTLLEEIITKYKPDGINLDYIRYPQCISAKFAGYDLSNWG
                     YTEYARNEFKSAMNIDPVDIKYGTPQWDAWAKYRQNKVTSFVFKTKQLASKYNIPVTA
                     VIFPDRFKSMEVKMQDWKTWSDNNYIDGFTPLILTCDKDTAVYLINDIRVNSKPNTKI
                     YPGLFVAFMNGNPDDLLRQLHESRKLKTAGIVLFDFAHLDSKYTNVLLTNAFTPSTPS
                     QTTLSKQSTQNKKDTKEKKKRKFLFFKKKGELTSAPQSDINVKKASN"
     gene            complement(10086..10382)
                     /locus_tag="CPT85_07030"
     CDS             complement(10086..10382)
                     /locus_tag="CPT85_07030"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB22001.1"
                     /translation="MKKFIALMSVILIIFTLFATGLGADAKGKKDRLKKDKQKSEKIQ
                     QKEPEETPAVPVPFEGILSQSSYKISSIDPVSGVNVSGSFYPGGRGANQLVVYT"
BASE COUNT         3280 a         1991 c         2109 g         3151 t
ORIGIN      
        1 tagaaaaaca gacccagctt gcacagggta tgctcgaaca gaaaaatgca agacccattc
       61 cggagctcaa ttccactctg tctgatattg ctgcggaact cgaaggcctt gatacagatg
      121 atgttgcaga ccatgtaaaa agctggattg aaaaaagcta actttcttaa aagtctgcac
      181 gggtattaaa aacacaaaat aacaggggag aaccattttg ccaatagaag gatttgattt
      241 taaagaattt gccaaaaacc ttgcgcaaca ggttggccct gctttgcctc cggatatagc
      301 tgatgctgac aagcagtata tcattaatat tgtccacaat ttctgttata tggcaggaga
      361 ggcgctttca aatgatacct caataaattt taatgctgaa caagcaagca ttgtgaccca
      421 gtttataggc gaatgggcgt ttcataaatc tattgatgtt ataagaagcg gcatcgatcc
      481 tcaattcaga gacggtatta tgcaaaaaat tgcgtttacc gtgtttgaaa ttgcaaaaac
      541 agcaattata aaaaacatgt cccaaggcga tatgatagcc gttgtcgaat ttcaggttaa
      601 aaaagcttac acctctgctc ttgaggagct taaagaaaaa ggcgtgctta cagaagaaca
      661 gtttaatgaa gcacaaagcc attcaaatat tgatgaaatg gcgcaacagg ctgctgcgca
      721 agaatatcag gcacaggcaa acggcgctgc tccttctgac aattatgtaa atcaggtaag
      781 tgacaataaa attttaaaac ttgctacttt tgcaatcgta ttaaaacacc ttcctgctga
      841 aaaaagacag ggactcctcg ataagttcag cgagcaagac gcagcgattt taagagacta
      901 cgtcaacatg gatgatttag aaaataagct ggaccctgtc ttgatagcaa aaagtcttgc
      961 cgaaattaaa aaaagccttc ccgaacccaa gaaaatcaac ccgggaagaa ttaaccagag
     1021 attatataat attgtaaaga actcgaatat ttcaaagatt tctaatatta taagtaaaga
     1081 acgaaaagcc gtaaaagact ttgtttcagc ggcaggttca ggcgggaaat cagacaggct
     1141 gccacccaga gttgcggata taatatgcaa tcaccttgaa gaaaaactta atcgttaaaa
     1201 aacgcttagg aaaaaattag cggatgataa tcaaaagata cagtcaaaaa aaaataataa
     1261 aacctcaaat acaagaagag ctaccagctg aatcggccgc accggtacag ccggaacctg
     1321 ttgttgagca acaacaggct gtgcaacaag aacaagaaaa acaggaagac acatcggata
     1381 tctttgcggg gtttaatttt gatgaaattg attttaacca gcgagccgaa agaagaagag
     1441 gcgacagaag aagaggttac agaagaatag atgatagaaa cctaatctca agagcccagc
     1501 aggaagctat taatatcaaa gaacaggctt caaaagaagg ctttgaaaaa gggcttgaag
     1561 aagcccactc tgctgtcaac gatttaaaag attcactgga agaatttttt gaatataaag
     1621 accgtcttta cgaaaaaatc tccggtgata tactggatat ttcattaaag gttgcagaaa
     1681 aaattattaa aaaagaagtt gaatcaagca aatccgtgct ggattcaatt gttcacgatg
     1741 cactaaaaag tcttgccaaa gacgaaaata aaattatact taaagtgaat ccgacagatg
     1801 tcgaatacac aaaagaaatt gtaccaaagc ttttgtcttc gggacaattt gaggctaaaa
     1861 tctttgtatc gggcgacaaa gatgtagagg aaggttctgc aataatcgaa acttcaaacg
     1921 gtgtaataga tgcaaacata agcacccagc tcgacttaat aaaagaggca tttaagcaga
     1981 tataatggca aacgcacaaa acgcaaatcc aataagcgaa atatctcttg cagtattcgt
     2041 agtatgtttg atactgatac tgcttattga ggtgccaaac tgggttataa acttttcgat
     2101 ttcattaaat atcacactcg gtatcgtgct tttgatgata tctttgtata ttcaaaaacc
     2161 tctggaactt gctgcatttc cttctatcat ccttattggt acaatgttta gacttgtact
     2221 tggtattgca tcaacaaggc ttatccttgc aaaaggcgag gccggtgagg ttatccacgc
     2281 attcggaacc tttgtaaccg gcggcaacat ggtagtaggc ggtgttatct ttattatcat
     2341 cactattgta cagtttatgg taatcacaaa aggtgctgaa cgtattgccg aggtttccgc
     2401 aaggtttgca ttagacgcaa tgccgggtaa gcaaatgact atcgacgcgg actttaacgc
     2461 cggattgata tctccggatg aggcggtgaa aagacgtgaa gacctccaga gagaatctgc
     2521 tctgttcggt tcaatggacg gtgctatgaa gtttgtaaaa ggtgatacca tggccggtat
     2581 catcatcgta ataatcaaca ttataggcgg cttgtgtatt ggtatgctcc agcagggaat
     2641 gccggcagcc gatgctgttg caaagtatac tattttaaca atcggtgacg gattgtcttc
     2701 acaggtgcct tcacttttga tggcaatatc tgcaggtatt gtaatgaccc gtgcttctgc
     2761 tgcaagcccc agcttagcat ctgatgttgc gggtcagatt ttgagcaaac ctatgagctt
     2821 gttctgtgca gtaggatttt tgatactgat tgcactttcc agccactgga caggtcttcc
     2881 gtggctgccg tttacgtttt ttgctatagt aattttgatt gctgcatttt ccgtactcgt
     2941 taatcaggat gtacaggcac agctcggaca attggaaaac gttaaacaaa acatgcagga
     3001 tcttgttaac ccgaacaaaa tgtatgaacg tttgggtgta gatgttttga gcctccaggt
     3061 aggctcaggt cttctgccta ttgcagaccc tgaccaggaa ggccagctgc ttgctaaaat
     3121 tgctgctctt cgtcaacgtg taactgacga attgggctat atcataccta acataagaat
     3181 tatggactcc tctgcattag atgccaacga atacttgatt tctatcagag gtaacaaagt
     3241 tgcaacaggc tttgtttacc ccggtaaact catggttatt gcagaccagt gggatgctac
     3301 gggcaaacct acgcctacag attctatagt caacatagat ccgacgtatc aggcacaggc
     3361 ctactgggta gacccgtcgc aaatcgatga ggaagaccac ctgacagcag tagattctgt
     3421 tgatgttatt gtcacacacc ttcaagagtg cgtaagaaaa tacgttgatg aagttatgac
     3481 aaaaacagac gttctcaagc ttatggaact tgttaaatca caagacccga cacttgttaa
     3541 cgaccttatc ccgacaatca tttcaacaag cgatcttcgt aaaatctttg ttaatctgat
     3601 aagagaaaaa gtctctatta aagatattat ctttatcttt gaaagacttt gcgactatgc
     3661 aagattctct aaagaaccag atattctttc agaacgtatc agagcagcac ttggcagaca
     3721 gatatgtctt tcaaactgta cagaggataa ggtgctgtac gcactgacac tttcaagcga
     3781 atgggaaaaa acactggacg acagctgcca gagaacagag ctcggcacaa tgtttttgct
     3841 caatcctatg caggttcagg aacttattga aacaactgcc tcaactctca tgagggcaca
     3901 ccagacagtg ggcagacagc cagtaatttt gtgttctcca agaatcagac tgccattgta
     3961 tcagctgctt gaaagacata ttccgacaat cgttgtaatc tcttacagcg aattgattac
     4021 tgacattaag gtagaagctg ttgatacaat tggtgaaatg tacgcccccg aatatggcta
     4081 ataggggaca ataaggaaga ttatgctcga acaatccacg gaacgttcaa ttgaatatat
     4141 gaaaaaaaga gcctttgaaa tcatagactc tacgcctatg taccagtata aaggttctgt
     4201 atcaaaactg ctcggcctga cagtagaggt taaacttccc gggctcaaaa taggtgattt
     4261 gtgctttatc gaaacatggc agggcgaaaa aaaacctgca gaagttgttg cgttcaaagg
     4321 tgatacagcc cagcttcttt tgctctatga cggagctgga ataggacagg gtagccttgt
     4381 gaccacaaca ggttcgccga ttatgctgcc tgtcggtgat tttcttcttg gcaggttaat
     4441 aagccccatg ggcgaaccta ttgacggacg gcctcttgat acttcaacag caaattttgt
     4501 ttcgatagac ggccccgcgc ccagtccttt tgacaggccg attatcaaca caatgttttc
     4561 aacaggcgta agggcaatag atgcgactct gacaatgggt gcaggccagc gtatgggctt
     4621 gttcgcaggt tctggcgtag gtaaaagtac aatgctcggt atgattgcaa gaaactctga
     4681 tgcggatgtc aacgttgttg ctctgattgg agaacgcggc agagaggtaa aagagtttat
     4741 agaagattct cttggcgaag aaggtatgaa aaaatccgta cttgtctgct ctannccagc
     4801 cgcctttgat tcgtcaaaag tgtcttcagg ctgcaacatc tgtgtgcgaa tattttagag
     4861 accagggcaa aaaggtcttt cttatgacag atacagttac acgttgtgca atggccggcc
     4921 gtgaggtagg cctgtccatt ggtgaacctc ctaccatgaa ggggtatcct ccttctattt
     4981 tttcgtggct ccaaaaagtc cttgaaagag ccggcaacag ccctaaaggc tctatcactg
     5041 cattgtatac ggttttgatg gaaggtgatg acatcaatga cccgattgta gataccgtgc
     5101 gtggtatcac agacggacac attttcttga gccgtaaggt tgcggaaatg aaccattatc
     5161 ctgccattga tattctggga agtatctcgc gtcttatgtc agctattgca acacccgagc
     5221 ataaagaagc tgctgctaaa atgcgccgtg caatggcact ctaccgtgag aataaagact
     5281 taatcgacgt tggtatgtat gttgccggtt ctaaccccaa actcgacgtt gcaattgaaa
     5341 tgatgccgca aatcaatgct ttcttgcagc agcgcgtgtc ggattctgtt agtatggaaa
     5401 ctacaatcag cacgcttatc cagatgatgg cacctgttga tatttagtta tgtaattatc
     5461 tgtacgtaaa tgtttctaga ccttggcttg ttgtcaaaat caataagcac aatctgctgc
     5521 cacgttccaa gaagcaatgc tccgtcgatc aacggtactg ttacagagct gccgataaga
     5581 gctgctctga cgtgagcata accgttgcca tcgtgccagg tgtcatcgtg atgatagttt
     5641 ctttccatgg gaacaatttt atccagaata tcaggaaagt cttttatcaa acctggttcg
     5701 tactcaattg ttgtgataga agcagtactg ccgggcagtg cgacaacaac gtttccgttt
     5761 ttgaggttat gttgataaac agctgatttt accttttgcg taatatcaat aatatcagtg
     5821 aatcctcgtg aattgattgt aaaatgttcc gtataaacag tcattattta acctctccgg
     5881 tgtatttgta caactccata tcctgtactc tcattgcata ataaggcatt gatttgtctt
     5941 tttcttttaa gaaaagannn nnnnnnnnnn nnnnnnnnnn nnnaggaata acaagtgaca
     6001 ttttcataat actcatagca gcttcgcttt tgagttttat acctgtgttg ttcatattaa
     6061 aatcaacagt gttgagagcc tggcctatat ataacctgtc tgtgttgagt atttcgtgtc
     6121 cgcacagctc tttgtaattt gtttcttctt tcaaannnnn nnnnnncaaa tgttttgctg
     6181 cctttgtatt ttgcggcttt tttgtttata tcttcataaa cgcttttgaa attgttgttg
     6241 gaattggttc tgtacagaat aacttcatcc ttttcagcct gcagtgcaac ggcataatca
     6301 aacgggttgt tgtaaaaaag tacctttacc ccatcattat cacggtcatt gttcttttca
     6361 tcaataccaa aatattcata tttagttttg ctgttgttaa atttttcttt tgcaagaatg
     6421 tcaaaacgag tagtgtagtt aaaatctttt ttcagcatag aataaatcaa atatgcattg
     6481 ttaggatctt cccagtctat tttgtcaaga atatcgcttg tctcgttgaa ttttgccatt
     6541 attgcatctt ctatctgttt ttttaattca agcgttgtct ttccgtaagc tgtgtaataa
     6601 gaatcttctg acagcataga tttcttaaaa gattgtctgt tgagctgttt tgccacttcc
     6661 ggtgtgccgt ctttaaacaa tacaggccct tttatgatat tgtctgcaaa ttcgttccat
     6721 acaagctgaa aagtaccaac ccaaactctg tcaggctgtt ttgattcagc tgacataaca
     6781 ggaagcattt gtactttatc attttttgca tttactgtat ttgcaccaaa aactgccgac
     6841 aaaagtatga ttaccgcagt taaaacagac aatagttttt tcattttaac aaactccttt
     6901 taaaattttt tctttagtat aaaacaaagg taaacttttg taacccgact gcgtgattta
     6961 atcaataatc ttttgtgcaa aaactttatt aatatataag gttagtattt taggagtcat
     7021 tttgtgatta aacccacaat gtttgacgca tttgtcaata caatgaaaaa atcacatata
     7081 gcaaagcaaa gtgcaagaaa ggctgtggca cacgcgcaac aaaatgctgc aaaactcgaa
     7141 caaaccgcac aggatatcct gacaaaatcc ggcgcagatg caaaagtatc tttccgcgta
     7201 aaaagtgtgg actcaactgc ttcaaaacaa ataagatatc taaaagactt tgatacatac
     7261 gaaaacaaac gcaatgatgt actaaatatt atccttggtt caggcatggg agaaattatc
     7321 ggtgattctt acggtatgcg ctttatctat aatgcagaaa aaacaaaagg taaagacacc
     7381 gcaaaactta tatatgacac tatgcttgat tatgcaaaaa ataaaaaaga tttttccgtc
     7441 tctgttatgg aaaactactt tggcaacggg ataaaaccct acgctgataa ttctgttatg
     7501 caaaattttg caaaacttac atacaaaaat ccaagaggcc aagtttgtca tactgcatca
     7561 gttaatgcgc aaaaaaaatc cggatataca cgtacaaata ctaatgccaa tatattcggt
     7621 gttaatacag aaatccaggg aggcggtaaa ttgacaacgc tctggggcga tgtggagcat
     7681 tttttatatg atgtaaggat gggcaaatca ccagatttgt caaaacttac tgatgaacaa
     7741 aaaattattg caaaatccat aataaacgac tacaaagcac taactgcaaa taataaacaa
     7801 catgaagtgt ttaataaaga atacctgtca aaaatctggg gctctttaag gaaatctgaa
     7861 atcaaaggcc ttgataaccc tgaacttccg gcattcccgc aaggctttcc tgatacccta
     7921 agagcagaaa atatcatgaa acttgcacat gtttaaaatt gttacagttt taaatcttat
     7981 atgttaaaaa aaatttatta caaacgttaa acataacaaa atcaaggatt taattatgaa
     8041 aacagattct ataaaccata acaatatagc atttggcgta agccannnnn nnnnnnnnnn
     8101 gtaaaaaaag cctgtgaatc aatagcaaaa cgtatcacag aagatgcctg cagtattgaa
     8161 tctgtaaact tacaggatat taaagaaaag gtctatctca gcgcctgtcc tgcctatagc
     8221 aagggaaaag ataaagctcc ggtgttaaag gttgatatga cagataagcg cggcatcaat
     8281 gcttatacat acattccann atgcaaagaa tatttaaact ctcaaaaggc agttagagaa
     8341 atttcagaca tcgtggacga cctgaaaaaa cgactggata acgctgcata cagagagtct
     8401 tacacagact aattgcttgc tttttttaca tttatatcag actgtggtgc cgatgtaagc
     8461 tcgccttttt tcttaaagaa taaaaatttt ctttttttct tttctttagt gtcttttttg
     8521 ttctgtgtac tttgttttga aagtgttgtc tgtgacggtg tgcttggtgt aaaagcattt
     8581 gttaaaagta catttgtata tttagaatca agatgagcaa agtcaaacaa tacaatacct
     8641 gctgttttta attttctact ttcatgcagt tgacgcaaaa ggtcgtcagg gttgccgttc
     8701 ataaatgcaa caaacaaacc cggataaatt tttgtgttgg gttttgagtt tactctgata
     8761 tcgttaatca aataaacagc agtgtctttg tcacaggtaa gaataagggg tgtaaaaccg
     8821 tcaatataat tgttgtcaga ccaggttttc caatcctgca tttttacttc catactctta
     8881 aacctgtcag ggaaaataac tgcagttaca ggaatattgt atttagaagc aagctgtttt
     8941 gttttgaaaa caaaacttgt aaccttgttt tgtcgatact ttgcccaggc atcccactga
     9001 ggtgttccgt atttgatatc aacagggtca atattcattg ccgatttgaa ttcgtttctt
     9061 gcatattcgg tataacccca gttggaaagg tcgtaacctg caaattttgc actgatgcac
     9121 tgcgggtatc ttatgtaatc aaggttgatg ccgtcaggct tgtattttgt aatgatttct
     9181 tcaagcagag tcaaaaggta agtctgtacc tctggatttg ccggatcaat aaaatatccg
     9241 ttatgctctg ataaagatgc cacaggtgtt ggtgaattgt atttcatctt tgtgacattt
     9301 gcccattttg ggtatacgga aataacgttc atcgggttgt tcatcgggtt ttcgttgcct
     9361 gcgtagaagg tctcaaacca gatgtaaatt ttgaggtttc ttttgtgagc ttcttcaacc
     9421 cagattttta acgggtcaaa gccgataaac tcgggtcttt gaggctgaac accgtatttt
     9481 gcaaaagttt ctgaaggaaa aatcgttttg ccttgataat aagtttccaa aaatactgtt
     9541 tctattccgt actttttaac cctgtccaat gttttttcaa tatcttcagg tgttttttcc
     9601 gtaggacgga gccatacccc tttaaactca tttttgtaat agggcaatgc atattgcatt
     9661 gctttgttag cggaagttat tgccatagaa gagtattttt gggtgtcttc ggggtgacgg
     9721 tttgctcttt tgaggttgtc caaggcttta gttacgtaat tgtgagcaat cgaatcgtcg
     9781 taataaatat cgttgtcttt gtaataacgc atcatctgat cgatttcttt tattttttcc
     9841 tttgttgcaa aaataaaact atcattggtc agatatgagt taattgtcat atttttgtaa
     9901 tcaataaata tttttgtacc tacagtaaga ttttcattca tccagttttt tgcccgtccg
     9961 tgtccgctta tgacaaggcc tcctttgggg ataattgagt ctgctccgct gatttgtaca
    10021 acagtgttat caattacaat ggcttctgcg ccaaattcat ttgtccctgt tctcaacccg
    10081 tttttttacg tgtaaacaac aagctgattg gcacctcttc ctccggggta aaaacttccc
    10141 gacacattca cgccggaaac cgggtcaatg gagcttatct tgtatgatga ctgtgacaaa
    10201 attccttcaa acggaacagg tacagcaggt gtttcttcgg gttctttttg ttgaattttt
    10261 tcagattttt gtttgtcttt ttttagcctg tcttttttgc cttttgcgtc agcacccaac
    10321 cctgtagcaa acagagtaaa tataatcaaa ataactgaca tcagggcaat aaattttttc
    10381 ataggcttat ttaatatttg aattacgtaa atctataatt attatcggac agtttttaga
    10441 ataatttatt aataaataat taaaatcaac taattagtgc atattttgta ttatcatgaa
    10501 actataaaac aaatacattc aatataacgg agctgataaa ccatatggaa tataaagact
    10561 attatgaaat attaggcgta aaaaggg
//
LOCUS       DABS01000158            6444 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12749, whole genome shotgun sequence.
ACCESSION   DABS01000158 DABS01000000
VERSION     DABS01000158.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6444)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6444)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6444
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(3..980)
                     /locus_tag="CPT85_07035"
     CDS             complement(3..980)
                     /locus_tag="CPT85_07035"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21958.1"
                     /translation="MAIYHKSGKFQEYKFKKEEDFEKEVVNNYKLFFGEKTIYIDAKK
                     KMETKIGNVIPDGFLFDLTNIDDPEFYIVEVELSKHSFYEHIFPQITKFIGFINSQNY
                     DTLITKIWEEVQSDKILKKQFGETKELYKFIKDTMANNCNILLVIDDLKQELNEMNSV
                     YQEWNRLVKQICIKKHINKNETMYDITPEFKDIEDTYLSEDVELQQTNEDFHLANKSD
                     VVKCIYSKLKAKLLADNPNLIFNPQKYYISIKANNNFAFLKFRKKKIKIVINMTYDKV
                     KALVKNNIVQELSESVQKFYFHKPNSCCAIVVSDVNYIDEVIELLKQLY"
     gene            complement(1083..1155)
                     /locus_tag="CPT85_07040"
     tRNA            complement(1083..1155)
                     /locus_tag="CPT85_07040"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(1120..1122),aa:Ala,seq:tgc)
     gene            complement(1227..1880)
                     /locus_tag="CPT85_07045"
     CDS             complement(1227..1880)
                     /locus_tag="CPT85_07045"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21959.1"
                     /translation="MIKDSSLTNIKFENKFFFAGISLGSCSTNETGVAIIDKNLNIIT
                     LDKLFSMEDVRFFFKRMAGKQNAIINIALPENPTMLNAKWKLTSRQYQLVQSSELINQ
                     DSDWIQRYSHRGCDFFEELKNQGLDIFRYDIHELKSFLGLSGVYKDRSPVDCKALQSA
                     LKYRFGFKELPSNMLPVSQLEAILGAYLGIIMADTKTGYNCKIKSQYNNIEVIGLDL"
     gene            complement(1890..2468)
                     /locus_tag="CPT85_07050"
     CDS             complement(1890..2468)
                     /locus_tag="CPT85_07050"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21960.1"
                     /translation="MANKPDDFHSLDFDEKLEIEKLQATIRSMSNFSDDSEGFLSQSP
                     KALMEGGLGDSDQQSESDEFDPYAEIEKPVIRNQGPRAKKFVVMVNPENVEYFDKIPL
                     EERTRLFNDLLSAHKKSLEGEKQKKHLIKFSKHMFVGIMTVLLSLPIMFVVVNKSIEL
                     TINNYKDVQNNFEKLYESKNHGRFNSVRRTIY"
     gene            2546..3622
                     /locus_tag="CPT85_07055"
     CDS             2546..3622
                     /locus_tag="CPT85_07055"
                     /inference="COORDINATES: protein motif:HMM:PF00294.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="DAB21961.1"
                     /translation="MTRNYMILHGESNMFDFDKEKLEGYIQKLKDPRVLIIGDMGIDE
                     MVYGDTERISREAPVLILRHSNTKIILGQAANAAHNLAAINGGKVSAIGLYGSDHHGP
                     MLLDAFKKAGINTEFMVQDPLRPTTVKSRISGASFHSVTQQIVRIDRLDTSAPSKEIE
                     DKIIENIEKAVPLHDAVILSDYNIGLLTDRVIEATVACAKHHGKIVVADVQKDMFRYK
                     GVYALTPNQPDSEKAAGYFIKDAQTLNRAGSDILEMTDAQVLLLTRGGDGMAVFEKGK
                     SEHVDVPVFNKTSVFDVTGAGDTVVASFTLALAAGAPPKYAAIIGNIAASIVIRSFGC
                     ATTSIEQIQASLNKMNMENYTIKV"
     gene            3639..4274
                     /locus_tag="CPT85_07060"
     CDS             3639..4274
                     /locus_tag="CPT85_07060"
                     /inference="COORDINATES: protein motif:HMM:PF14221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21962.1"
                     /translation="MKQLKLLDYIIIAVVIAVLLIGALAYLGKNKFSKSPVEATKKIA
                     FQVMLKSVSLTDSKMPFKIGEESFITIRNVPYTKLQIIDVAYQAKKMVLPINNPQQPF
                     VVIDDYSMPYQFDFIVTLIDDAKITKDGAVVGGNKIKIGLPIVLEGFNYRIGGTISNV
                     QILEDKQVEEINKFVTQAKLQSQMDDALQSQAQNAPKEEAKPEKQVEKSAE"
     gene            4277..4597
                     /locus_tag="CPT85_07065"
     CDS             4277..4597
                     /locus_tag="CPT85_07065"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21963.1"
                     /translation="MIESKFIDLKNKFYAYFQNKLEKITKNSFFLGKIDEVILTFICL
                     TLFASTFMPSEKIGAFAIIVVLLTILKLFTKKGAKIALTKFDAALFVYFAICFIXRRA
                     FTDF"
     assembly_gap    4571..4572
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    4794..4795
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4824..5606
                     /locus_tag="CPT85_07070"
     CDS             4824..5606
                     /locus_tag="CPT85_07070"
                     /inference="COORDINATES: protein motif:HMM:PF04932.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21964.1"
                     /translation="MLGGYLIAGIPYILGASAICLVQKNFKTFFSSLTFFALCSLAVF
                     LTGSRGAYLALAAIVAGMILIVTVVIKTDFNTVQKLKSVWQKFVIAVISLFALVLIAV
                     PKITKRLLSIFILRGDSSTSFRMNVYNSSWHMFCDNCILGIGAGNQTFREIYGLYMLT
                     GYDALSTYSVPLEIAVESGIFGLIAFVAFIGLFLFDAYKCITTKANADGLADKIVVCA
                     ATLTIIGVMTHGLFDTIYFRPQVQFLFWTTIAMASSVMYRQN"
     gene            5625..>6444
                     /locus_tag="CPT85_07075"
     CDS             5625..>6444
                     /locus_tag="CPT85_07075"
                     /inference="COORDINATES: protein motif:HMM:PF07884.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21965.1"
                     /translation="MSLTKRIVLTIIALVGFLTSVKLTMIYWDANFNPYALSSFCSIN
                     DLIDCDGVAKTGHSQFWGVPLALWGLFLYFVFLFFTYVDKLKNIEIKGFRIFAYFDVF
                     KNPESYICALGIIAFSISMILAGISIFEIHKLCILCFFTYILNLLIGLIAKPKNQSFV
                     DVFVTSFKDFVEALKVKKYALAFSVLLIVAIGFLSYTEISDVMAPQVKLKKEMDYFSK
                     PSKAGKSVTGNILGDKNAILVLHEYTDYQCPFCFVLNTMTLRAAGELSNIKVVHH"
BASE COUNT         1969 a         1053 c         1119 g         2299 t
ORIGIN      
        1 ttttaatata attgcttcaa caattctatt acttcatcaa tataattaac atcgctaact
       61 actatagcac agcaactatt tggcttatga aaataaaatt tttgtacact ttctgacaat
      121 tcttgtacaa tattattttt aactaaagct tttaccttat cataagtcat attaataaca
      181 attttaattt tcttttttct aaattttaaa aacgcaaaat tattgttagc ttttattgat
      241 atataatatt tttgtgggtt aaaaatcaaa tttggattgt ctgccaacaa ttttgctttt
      301 agtttgctat atatacactt tacaacatca cttttattgg ctaaatgaaa gtcttcattt
      361 gtctgttgaa gctcaacatc ttcactgaga taagtgtctt ctatatcctt aaattcaggt
      421 gttatatcat acattgtttc atttttgtta atatgttttt tgatacaaat ttgttttact
      481 aatctattcc attcctgata aacggaattc atttcattta attcttgttt taaatcatca
      541 ataactaata atatattgca attgttagcc attgtatctt taatgaattt atataattct
      601 tttgtttctc caaattgttt ttttagtatc ttatctgatt gaacttcttc ccaaattttt
      661 gtgattaatg tgtcataatt ttgagaattt ataaaaccaa taaattttgt aatctgaggg
      721 aatatatgct catagaaaga atgcttagat aattcaactt ctacaatata aaattccggg
      781 tcgtctatgt tggtcaaatc aaataaaaag ccatcgggta taacattgcc aatttttgtt
      841 tccattttct tttttgcgtc aatgtatata gttttttcac caaaaaaaag tttataatta
      901 tttactactt ctttttcaaa atcttcttct tttttgaatt tatattcttg aaattttcca
      961 gatttatgat aaatggccat tagtgatatc cccctattat tatcatagta taaaaaatat
     1021 tgtctaaatg caacaaataa aacgcattaa aaaagagcct ttcggctctt atctttaagt
     1081 tttggaggat aggagattcg aactcctgac cccctgcgtg caaagcaggt gctctaccag
     1141 ctgagctaat cccccaggga ttttgtgtct caaaacttgg gacaattatt atcatacatg
     1201 ctaatttttt tttgtaaagt gattttttat aaatccaaac ctataacttc aatattatta
     1261 tattgtgatt ttattttgca gttatatcct gtttttgtgt cagccatgat aattcctaaa
     1321 tatgcaccaa ggattgcttc cagttgagat accggcagca tattagacgg gagctcttta
     1381 aatccaaagc ggtattttag tgcactttgc agagctttac agtcaacagg agagcggtct
     1441 ttgtacactc ctgacaaacc taaaaatgac ttcaattcgt gtatatcata cctgaagata
     1501 tcaaggccct gattttttag ttcttcaaag aagtcacatc ctctatgcga gtaacgttga
     1561 atccagtcac tatcttgatt aatcagctca ctgctttgaa caagctgata ctgacgcgaa
     1621 gtaagcttcc attttgcatt aagcattgtg gggttttcag gcaaagcaat atttataatt
     1681 gcgttttgct taccagccat tcttttaaaa aagaatctta catcttccat agaaaagagc
     1741 ttgtcaagtg taattatatt caaatttttg tcgataattg caacgcctgt ttcattggtt
     1801 gagcaagaac caagcgaaat tccggcaaag aaaaatttgt tttcaaactt aatgttagtt
     1861 agtgagctat ccttaatcat taaaaacctt tagtatattg tacgtcttac agaattgaac
     1921 ctgccatggt ttttgctttc gtaaagcttt tcaaaattat tctgtacatc tttgtaatta
     1981 tttattgtca attcaattga cttgtttacc acaacaaaca ttataggcaa agaaagcaaa
     2041 actgtcatta ttccgacaaa catatgcttt gaaaatttta tcaaatgttt tttttgtttt
     2101 tcaccttcaa gacttttttt gtgtgcagat aacaaatcgt tgaagagtct tgttctttct
     2161 tctagaggga tcttgtcaaa gtattcaaca ttttcagggt taaccattac aacgaatttt
     2221 tttgcccttg ggccttgatt gcgaataact ggtttttcaa tttctgcata tggatcaaat
     2281 tcatcacttt cggactgttg atcgctgtcg ccaaggcctc cttccatcaa tgcttttgga
     2341 ctttgagaaa gaaatccttc tgaatcatcg gaaaaattac tcatgcttct gatagttgct
     2401 tgaagttttt caatttcaag cttttcatca aaatcaagac tgtgaaaatc gtcaggtttg
     2461 tttgccattt ttcctctggt ttcttacaaa ctttactttg tttttgtgct aaactaaata
     2521 tattatacta catattttgt aaataatgac ccgcaattat atgatattgc atggagagag
     2581 taacatgttt gattttgata aagaaaaatt agaaggctat attcaaaaat taaaagaccc
     2641 cagagtcttg attattgggg atatgggcat agatgagatg gtctacggtg acacggaaag
     2701 aatctcaaga gaagcacctg ttttaatttt aagacattca aatactaaaa ttattctcgg
     2761 tcaggctgca aacgctgctc ataaccttgc ggcaataaac ggtggtaaag tttctgcaat
     2821 aggcttgtac ggtagtgacc atcacgggcc tatgcttttg gacgctttta aaaaagcagg
     2881 gattaatact gaatttatgg ttcaagaccc tttgagacca actactgtaa agtcaagaat
     2941 atccggagct agttttcatt ctgtgaccca gcagattgta agaattgatc gtcttgatac
     3001 atctgctcct tcaaaagaga ttgaagataa aatcattgaa aatatagaaa aagccgtacc
     3061 tctccacgat gcagtaattt tgtctgatta taatatcgga cttttgacag acagggtaat
     3121 tgaggcaaca gttgcttgtg caaaacatca cggaaaaata gttgttgctg atgtacaaaa
     3181 agatatgttc cgctacaagg gcgtttatgc tcttactcct aaccaaccgg acagcgaaaa
     3241 agctgcaggt tattttatta aagatgcaca aacacttaac cgtgccggct ctgatatttt
     3301 agagatgaca gatgcacagg ttcttttgct gaccagaggc ggagacggta tggctgtatt
     3361 tgaaaaaggt aaatcagaac atgtggatgt accggtattt aataaaacaa gtgtttttga
     3421 tgttaccggt gccggagata ctgttgttgc gtcatttacc cttgcacttg ctgcgggtgc
     3481 ccctccaaaa tatgctgcta ttatcggcaa cattgcggct agtattgtaa tccgttcttt
     3541 tggttgtgca acaacatcta tagagcaaat acaagccagt cttaacaaaa tgaatatgga
     3601 aaactataca atcaaagtgt aaatataagg agtttaagat gaaacagtta aaacttttgg
     3661 attacataat aattgccgtg gttattgcgg ttttacttat cggtgctctc gcatatttgg
     3721 gcaaaaacaa attttccaaa tcacctgtgg aagctactaa aaaaattgct tttcaagtta
     3781 tgttaaaaag cgtttcgtta acagattcta aaatgccgtt taaaataggc gaagaatctt
     3841 ttattacaat aagaaacgtt ccttatacaa agctgcaaat tattgatgtt gcttatcagg
     3901 caaaaaaaat ggtgctccct atcaataatc ctcagcagcc gtttgttgtt attgatgatt
     3961 attctatgcc gtatcagttt gactttattg ttactttaat tgacgacgct aaaattacca
     4021 aagacggtgc tgttgttggc ggtaataaaa taaagatcgg tttgcctatc gtgcttgaag
     4081 gtttcaacta ccgtataggc ggaacaattt cgaatgttca gattcttgaa gacaaacagg
     4141 ttgaagaaat taacaagttt gttacacagg ctaaactgca atcacagatg gatgatgctc
     4201 ttcagtcaca ggcacaaaat gcgccaaaag aagaagcaaa acctgaaaaa caagtggaaa
     4261 aaagtgctga ataattatga tagaatctaa atttattgac ctgaaaaata agttttatgc
     4321 ttatttccaa aacaaactgg aaaagattac taaaaacagt ttttttcttg gcaaaattga
     4381 tgaagtcatt ttgacattta tttgtcttac cttatttgca tcaactttta tgcccagtga
     4441 aaaaatcggt gcctttgcaa taatagtggt acttttgaca atactaaaac tgtttaccaa
     4501 aaaaggggcc aaaattgcac tgacaaagtt tgatgctgct ttatttgttt attttgcaat
     4561 atgctttata nnccgcagag cattcacgga tttttaaaaa cagtaattta tatattttat
     4621 tactactgtt cagttaatta ttttcagaca aatcaaaaca aaatacgcta catatttttg
     4681 cttgtaggta ttttatgttc agctgaggcg ataatcgcta tatatcagaa ttttgcaggc
     4741 gtcgagcaga tttcaacctg gcaggattct aactacatta atcctgaaga tgcnntggta
     4801 ctttaaagcc gctcaatccg aatttgcttg gtggttattt gattgcaggt ataccataca
     4861 tactgggggc aagtgcaatt tgcctggtac aaaagaattt taaaacattt ttttcgtctc
     4921 ttaccttttt tgctttgtgc tctcttgcag tgtttttgac aggctcacgc ggtgcatacc
     4981 ttgctttggc tgcaattgtt gccggtatga ttttgatagt gactgttgtt ataaaaacag
     5041 acttcaacac cgtgcaaaaa ctaaaatctg tttggcaaaa atttgttata gctgttattt
     5101 cgctttttgc attagttttg atagctgtgc ctaaaattac caaacgactt ttgtcaatat
     5161 ttattttgcg tggagattca tccacttctt ttagaatgaa tgtgtataat tcttcgtggc
     5221 atatgttttg cgacaactgt attcttggca taggtgcggg caatcaaact tttagagaaa
     5281 tatacggcct ttacatgctt acaggatatg atgcgttgag cacttattcc gtacctttgg
     5341 aaattgctgt ggaaagcgga attttcggat tgattgcctt tgtagctttt attggcttgt
     5401 tcttatttga tgcatataaa tgtattacaa caaaggctaa tgctgacggg ctagccgata
     5461 agattgtggt ttgtgctgca acattaacaa ttataggtgt gatgacacac ggattgtttg
     5521 atacaatata tttcagacca caggtgcagt ttttgttctg gacaactatt gctatggcgt
     5581 cgtctgtaat gtatagacaa aattaaggat aaagaggtat aaaaatgagt ttaaccaaaa
     5641 gaattgtatt gacaattatc gctcttgtcg gttttcttac ttccgttaaa ttaacaatga
     5701 tatattggga tgcaaacttt aacccttatg cgctttcaag tttttgttcc ataaatgatc
     5761 ttattgattg tgatggtgtt gcaaagactg gtcattctca attttggggt gtgccgcttg
     5821 ctttgtgggg gctgttttta tactttgtat ttttgttctt tacatatgtg gataaactca
     5881 aaaatattga aataaaaggt tttagaattt ttgcatattt tgatgtgttt aaaaaccccg
     5941 agtcgtatat ttgtgctctg ggtataatcg ctttttcgat ttcaatgatt ctggcgggaa
     6001 tctctatttt tgaaatacac aaactttgca ttctttgctt ttttacatat attctaaacc
     6061 ttttgattgg cttgattgcg aaaccgaaaa atcaaagttt tgtagatgtt tttgtaacaa
     6121 gtttcaaaga ttttgttgaa gctttaaaag tcaaaaagta tgctcttgct ttttcagtgt
     6181 tgttgattgt tgccattggc tttttgtcat atacagagat aagcgatgtt atggcgccgc
     6241 aggttaaact aaaaaaagaa atggactatt tttcaaaacc gtcaaaagcc ggtaaaagtg
     6301 tgacaggaaa cattcttggt gataaaaatg ccatacttgt tttgcatgag tataccgatt
     6361 atcagtgtcc gttctgtttt gtgttgaata caatgacttt gcgagcagcc ggcgagttgt
     6421 ctaatataaa agttgtgcat caca
//
LOCUS       DABS01000159           12788 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_11815, whole genome shotgun sequence.
ACCESSION   DABS01000159 DABS01000000
VERSION     DABS01000159.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 12788)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 12788)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12788
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..741
                     /locus_tag="CPT85_07080"
     CDS             <1..741
                     /locus_tag="CPT85_07080"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21923.1"
                     /translation="AENKLPSGVGKKIVEALKKQAEIEIQPIPDSVEGAGSLIKEPQT
                     SPAENFEEPITDTVSLDDNFVDFSLDDNAPDELGDYMENSFDNDLDSANQSDFDEPFP
                     SSITDNLNFEETDTPMFEEKEMFNPNPAVQPRINGVPPQKNYSMPANVAVLKRLIMQL
                     PQGVTKQTGAQIIRQTMEALGISMNSVLKEAQQGQDSLTTSAKACMAQIQEYRSNIKT
                     LEKQVQDYKKQAVALNDLISLFIMTDRH"
     gene            complement(808..1485)
                     /locus_tag="CPT85_07085"
     CDS             complement(808..1485)
                     /locus_tag="CPT85_07085"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21924.1"
                     /translation="MKKKFPEVKTAFTLAETLLTLAIVGVIAALTIPTLKDYSDEVRY
                     ITGVQKAFATINAATTAIETKHGDAMFWKFDQDKTINWYRETMNVIPTTNEQTWERTY
                     IDGTEGYTFEPSFFTADGMAWSIGDGLYPCGGGAALVDINGPQPPNVIGIDQHGFRLG
                     TLCDDKNKKGDWGVYPMGDVLHDQNGDWACTAYVIKHNKMPWIKGMQNINTCKDVLKL
                     SKPADTP"
     gene            complement(1505..2308)
                     /locus_tag="CPT85_07090"
     CDS             complement(1505..2308)
                     /locus_tag="CPT85_07090"
                     /inference="COORDINATES: protein motif:HMM:PF08668.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="DAB21925.1"
                     /translation="MTINAQQVLDQIKEIPAMPNVIVKALGIIKDDQSGTKELSEIMA
                     YDQALTSQVLKLVNSAYYGFAQEITSVNKALALLGMTQTKNIIIAVAMKPMLTSQGGR
                     DMWKHSLRCAVACEYLAEKTGVVDTGDAFTIGFLHDIGKIVLNIVDTMTYQKVRTMVK
                     NGMDIIEAENEMFETNHADMGFLLAKKWKLSVLLANCIKYHHDPLSSSMPQVSTLAYA
                     ANKISHEEPDVMDEALVKEQLNISISELMQYREEIIAKANSLFAQLNAG"
     gene            complement(2312..3226)
                     /locus_tag="CPT85_07095"
     CDS             complement(2312..3226)
                     /locus_tag="CPT85_07095"
                     /inference="COORDINATES: protein motif:HMM:PF02687.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="DAB21926.1"
                     /translation="MSDESTKAIIKKKVKAHIPKDWLKELRIIYRITLETIYGIKRTG
                     WINIAIITTMAAILTIFGGLFRFTISLNSFVHELGNALEISVYIKSDARTESVAQEIR
                     GLEHVERVKIIPKERSWSELKREFDVPNMDNPLPDTLHVKVDKPENITTVFNKIKTYN
                     GVEDLNYAQDIAKKMQFFNNVVHTITLVVVILVAILTITIINNTIQLVIQSRKEEIEI
                     MRLMGVSNWYIKIPLILQGAIYGFMGALISLLPLNAVNNGLMKVHEFFMVPPPVLANN
                     TVILVLFIIAAGCGAGGSLLSIKKHLQV"
     gene            complement(3243..3917)
                     /gene="ftsE"
                     /locus_tag="CPT85_07100"
     CDS             complement(3243..3917)
                     /gene="ftsE"
                     /locus_tag="CPT85_07100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012059166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="DAB21927.1"
                     /translation="MIQLRGVTKKYKNNYALKNVNLDIMSGEFVFITGSSGAGKSTLM
                     KLLYKEETPTTGSVMIGGINIANLPSEKVPNLRRCMGIVFQDYKLLMNQSVYDNCAYV
                     IRTLGMSSKEIEARVTGALKVVGLLEKMKAKPTELSGGEQQRVSIARAIVNGPPLLIA
                     DEPTGNLDPKNSMEIMQILEQINQKGITVLVSTHDHAMVDYFRKRVLTLEGGQIIRDV
                     QAGTYE"
     gene            complement(3919..4674)
                     /locus_tag="CPT85_07105"
     CDS             complement(3919..4674)
                     /locus_tag="CPT85_07105"
                     /inference="COORDINATES: protein motif:HMM:TIGR00696"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="DAB21928.1"
                     /translation="MECLLRKKEPILGFEVDLFTFEEALQFVHKHLQENKGMHIVTIN
                     PEMITSGNKNDEFGRVLNQADMSIPDGVGIKIALKMKGINQENIPGIEFSKKLIAMSA
                     LEGFTIGLLGAKEEVVQKAAQNLRNEFENLNITYVRNGYFSEDEENIIKEELKAIAPR
                     VLFVALGAPKQELLIAKLKQEMPNTIFIGVGGSFDVWSGMVKRAPEIYQKMGLEWLYR
                     TVKEPSRFKRIFPALPLFLIQVIIETVHENLVK"
     gene            4787..5911
                     /locus_tag="CPT85_07110"
     CDS             4787..5911
                     /locus_tag="CPT85_07110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013627963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="DAB21929.1"
                     /translation="MIPIVDLKRQYKQTGEEIEKAVVDVLRSGAYILGPNTKALEQEF
                     SQYLGTKHAIGLNSGTDALHLALRALDIGKGDEVITVAFTFVATTESIEIVGATPVFV
                     DIDPDTFNMDVTQIEDKITPRTKAIMPVHLYGQPADMDVIMDIAKRHNLYVIEDCCQA
                     VGAEYKGKKVGSFGDIGAYSFFPTKNLGGMGDGGMAVTNSDFLKDRMIALRNHGGAVR
                     YHHDEIGVNSRLDEIQSAILRVKMNYIDEWNKMRREVAHRYTELFKDCEDVITPKELD
                     ETYCVYHQYTIKVPNRDAVQKMLQENGVGAMLYYPIPLHMQKVHAHLGYKMGDLPKTE
                     YNTQHVMSLPMFAELTAEEQKEIATKVKDAIAKCKATASC"
     gene            6046..6351
                     /locus_tag="CPT85_07115"
     CDS             6046..6351
                     /locus_tag="CPT85_07115"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21930.1"
                     /translation="MKVNFGKVYVQRSIRANEHTSLKHKAENLMLEGENSRYCDKDYF
                     VTEYDYLEPSLSYPSVFNTHAYKVEAFKNNKKLGEQIYTKEDFLNNDTWEILSLENN"
     gene            6412..7770
                     /gene="lpdA"
                     /locus_tag="CPT85_07120"
     CDS             6412..7770
                     /gene="lpdA"
                     /locus_tag="CPT85_07120"
                     /inference="COORDINATES: protein motif:HMM:TIGR01350"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="DAB21931.1"
                     /translation="MEKKYDLGIIGGGPAGYSAAIRAAQKGLKVVLFEKDCLGGVCLN
                     RGCIPTKTILHCADFYKSLKKAEKFGVSFGENAALSADYQKVFNRKNEIVSKIQKSLT
                     KLVQSYGVTIVNETALIADTNIIHAGGMAYSCKNIILATGSKPSQINGLECDGKFILN
                     SNDVLCLESLPENILVVGSGAIGVEWARIFSGFNKAVTVVELASKLLPQADTDVSKRL
                     ERLFKKEKIKYFTQTKIEKIENHDVILSNGQVLKPDMILCAIGREPVLPVCEGIEIEK
                     DGKFVKVNQNFQTNYKNIFAIGDINGKLQLAHSAQHQAIGVVDYIVKGDDVHFDKNLV
                     PSVIYGSPEIAWVGKTEEDLNAEDYKVSTFPVAALGKAQADDEIDGFLKVIEQNGKIA
                     GAHAVMPEASSIIQQFALMMTGNIDVKLALKTVFAHPTYSEAVFESLLGLEDGSISLP
                     PV"
     gene            7808..8671
                     /gene="lipA"
                     /locus_tag="CPT85_07125"
     CDS             7808..8671
                     /gene="lipA"
                     /locus_tag="CPT85_07125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011916433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="DAB21932.1"
                     /translation="MERKRLPDYLKRGIIDTEKTKLVRSILKHKCLNTVCEAARCPNK
                     AECYAKNTATFLIMGNICTRNCRFCNISGGTPQSIDPEEPLKVAQAIKELNLEYAVIT
                     SVTRDDLPLQGADCFRNVILETKKLCPSIKIEVLTPDFEGIHDLIDIVADANPDVFNH
                     NIETVRRLYPKARPLAKYHRSLDFLNHIKEKYPNMKTKSGLMVGLGETFDELKQTFFD
                     LDAVGCDIVTVGQYMQPTKHHLPVEKYYTDKDFENVKQLAKQAGIKQIVASGLVRSSY
                     RAFETYNDTNY"
     gene            8712..9392
                     /locus_tag="CPT85_07130"
     CDS             8712..9392
                     /locus_tag="CPT85_07130"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21933.1"
                     /translation="MRFKYLTKVLLKSEKKLDISTKAAIRKSLLEYNELIETIAKIEF
                     KKLSSSYLIDFSELVNIGTQVVHHLCSTSDITNYNNSYISTAIKWAIRNEVRRRYKWY
                     SQKTKKEGVSNSDAQTANEDIREAVYKTILSIDEMAEAENPTQIKDDAQTPDELAAFQ
                     EMSHAIKEAMKLLPQRERDLIEAKFFQDKKLRELSDDFNISPSRISRIIQSGLNKIRK
                     ELEKNNLA"
     gene            complement(9389..10372)
                     /locus_tag="CPT85_07135"
     CDS             complement(9389..10372)
                     /locus_tag="CPT85_07135"
                     /inference="COORDINATES: protein motif:HMM:PRK10416.2-4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="DAB21934.1"
                     /translation="MFDFFKKKDENKPQKQQAAQEQSEKKSIFSLTFESLKKTIENTS
                     QSLVGNVVKQIENEEEFDEFILDDMEELLIKADLGVNTASGIVDKLRKQNKMKPSRVR
                     EYLQNEFSSILTGAGSNELNFKDNELNLYFIVGVNGAGKTTLIGKLANRFKQQGKKVL
                     VAAGDTFRAAAEEQLNIWSQRAGADIVRNDGADPASVVYDAIQKAKNENYDVILVDTA
                     GRLQNKFNLMQELSKIKSVIDKNAPETLRESILVLDANTGQNGLSQAKVFTECVNLTS
                     VALTKLDGXKGGIIIAIAKEMNLPVKLIGVGEKMEDLKDFDAQDFVKALFS"
     assembly_gap    9520..9521
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(10390..10875)
                     /gene="nusB"
                     /locus_tag="CPT85_07140"
     CDS             complement(10390..10875)
                     /gene="nusB"
                     /locus_tag="CPT85_07140"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="DAB21935.1"
                     /translation="MKEYVDTYEAESPENLKRPMHANNVPVPLPMTSDLSGRLEELLN
                     ISEKVVLALEIAEMTALEHTGDVKSYVVQIATAYKEHAQEIDSLIQKYAHGWDLDRLV
                     KIDKDILRIAIAELLFIEGVPVKVVVDEALELAKKYSTDDSSSFINGILGKVIDEKKE
                     Q"
     assembly_gap    11000..11001
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            11139..12191
                     /locus_tag="CPT85_07145"
     CDS             11139..12191
                     /locus_tag="CPT85_07145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013886766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
                     synthase"
                     /protein_id="DAB21936.1"
                     /translation="MIKRRLSKQIRIGDVKIGGDAPVSVQSMCNTDTRDVNATVQQIK
                     ELEDAGCEIIRLAVLNKDAASAVKEIKKQVKIPVIADIHFDYRLAIQCIENGIDALRL
                     NPGNIGRDENVKKVVSLAKINNVPIRIGINAGSLEKEFAAMDIPLHEKMVKSAMRHIQ
                     ILEDNDFDKIKISLKSSSVPTTIDAYRMIAGMVDYPLHLGVTESGTLKGGLIKSSVGL
                     GTLLSEGIGDTIRVSLTENPVEEVHAGFGILKSLELRQKGINFVSCPTCGRCQINLIE
                     LAKKVENALQNIDKPITVAVMGCPVNGPGEAKHADYGVAGAIKEGYIFKKGEIIKRVP
                     ENDILPELLKLIENGN"
     gene            12280..12594
                     /locus_tag="CPT85_07150"
     CDS             12280..12594
                     /locus_tag="CPT85_07150"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21937.1"
                     /translation="MKNLTKYAMVLAVITVAATAANAEISVKDTISPEFIHNQGYSAE
                     VSRIIDVKTKDPVTPIPTEEKQSVWKDIGWTLLETLDPTVERPNKFADHETKYHSSFE
                     DL"
BASE COUNT         4076 a         2339 c         2342 g         4027 t
ORIGIN      
        1 gcagaaaata aactcccttc aggtgtaggc aaaaaaattg ttgaggcttt gaaaaagcaa
       61 gcagaaatag aaatacagcc aatacctgac agtgttgaag gtgccggctc tcttattaaa
      121 gaacctcaaa cttctccggc agaaaatttt gaagaaccca ttacagacac agttagtctt
      181 gatgacaact ttgttgattt ttcattagat gacaatgctc ctgacgagct tggcgattat
      241 atggaaaact catttgacaa tgatttggat agcgcaaatc aaagtgattt tgatgagcca
      301 ttcccttcaa gtattacaga taatttaaat tttgaagaaa cggatacacc aatgtttgaa
      361 gaaaaagaaa tgtttaatcc aaacccagca gtacagccca gaatcaatgg cgtacctcca
      421 caaaaaaatt attcaatgcc agcaaacgtt gccgttttga aaaggctgat tatgcagctt
      481 ccgcaaggcg ttaccaaaca aaccggtgca caaattatca ggcagacaat ggaagccttg
      541 ggtatttcaa tgaacagcgt cctaaaagaa gctcaacaag gccaagacag ccttacaaca
      601 agtgcaaaag cttgtatggc tcaaattcag gaatacagaa gcaatatcaa aactcttgaa
      661 aaacaggttc aagattacaa aaaacaggct gttgctttaa atgacttaat cagtttattc
      721 ataatgactg acagacatta atcaataaaa tattattcat aaaaaaagct ctatattaat
      781 agagcttttt tgttatatgt tttaatctta aggagtgtct gctggtttac ttagttttaa
      841 aacatctttg caggtattga tattttgcat acctttaatc cagggcattt tgttgtgttt
      901 tattacataa gcagtacaag cccagtctcc attttgatca tgtaatacat cacccattgg
      961 gtacactccc caatcgccct ttttattttt gtcgtcgcat agagtaccca atctgaaacc
     1021 atgttgatct ataccaatta cattaggtgg ttgcggtcca tttatatcaa caagtgcggc
     1081 tcctcctccg catggataca ggccatcacc tattgaccag gccataccat ctgctgtaaa
     1141 aaatgaaggc tcaaatgtat atccttctgt tccatcaata taagttcttt cccaggtttg
     1201 ctcatttgtt gttgggatta cgttcattgt ttctctatac cagttaatcg ttttatcctg
     1261 gtcaaatttc caaaacattg catcaccatg ttttgtctca attgcagttg ttgccgcatt
     1321 aattgttgca aaagcctttt ggactcctgt tatataacgg acttcgtcag aataatcttt
     1381 aagcgttggt attgtaagag ctgcgataac acctacaatt gctaatgtaa gaagtgtttc
     1441 agcaagagta aatgctgttt ttacttcagg aaatttcttt ttcatattct atccaatctt
     1501 tttattaacc ggcattgagt tgcgcaaaca gagaattagc ttttgcaata atttcttctc
     1561 tgtattgcat taattcactg atactaatat ttaattgttc ttttaccaat gcttcatcca
     1621 taacatcagg ttcttcgtgc gaaattttat tagctgcata agcgagtgtg ctgacctgcg
     1681 gcattgatga agataacggg tcatggtgat attttataca gtttgcaagc agaacagaca
     1741 acttccattt ttttgcaagc aaaaagccca tatcagcatg gttggtttca aacatttcat
     1801 tttcggcttc aataatatcc ataccgtttt taaccatagt tctaactttt tgataagtca
     1861 ttgtatctac aatgtttagt acgattttgc cgatatcatg taaaaatccg attgtaaaag
     1921 cgtctcctgt atcaacaacg cctgtttttt ccgcaaggta ctcacaggca acagcacatc
     1981 ttaaagagtg cttccacata tcacgaccgc cttgtgaagt aagcataggt ttcattgcta
     2041 cagctataat gatatttttt gtctgagtca tacccaaaag cgccagcgct ttgttaacag
     2101 aggtaatctc ttgtgcaaat ccgtaataag ccgaattcac aagtttgagt acctgagatg
     2161 tcagtgcctg gtcataggcc atgatttcag aaagttcttt tgtacctgac tggtcatctt
     2221 taattatacc cagagcctta acaatgacat taggcattgc aggaatttct ttgatttgat
     2281 ccaatacttg ttgtgcgttt attgtcataa tttatacctg taaatgtttc ttgattgata
     2341 gtaaacttcc gcctgcaccg catccagctg cgatgataaa taataccaaa attaccgtat
     2401 tgttagccag aaccggaggt ggaaccataa agaactcgtg aaccttcata agtccgttgt
     2461 ttaccgcatt gagggggagt aatgaaatca atgcacccat aaagccgtaa attgcacctt
     2521 gtaaaattaa cggaatcttt atgtaccagt tgctcacgcc catcagtcgc ataatttcaa
     2581 tctcttcttt gcgggactgg ataactagtt gtattgtatt attaattatt gtaattgtca
     2641 aaatagctac aagtatcaca acaacaagcg taatggtgtg tacaacattg ttgaaaaact
     2701 gcattttttt agcaatatcc tgtgcataat ttaagtcttc tacaccgtta tatgttttta
     2761 ttttgttgaa aaccgttgta atattttcag gcttatcaac tttaacgtga agagtgtctg
     2821 gcaatgggtt gtccatattc ggcacatcaa attctctttt gagctctgac caggatcgtt
     2881 ctttggggat aatttttacc ctttccacat gctcgaggcc tcttatttct tgagctactg
     2941 attctgttct ggcatctgat tttatgtaaa cggaaatttc caacgcgttg cccagctcgt
     3001 gtacaaaaga atttaaagaa attgtgaacc tgaaaaggcc tccaaaaatg gttaaaatag
     3061 cggccattgt agtaataatg gcaatattta tccatcctgt tcttttgata ccgtaaatag
     3121 tttcaagcgt aattctgtag attattctca attctttgag ccaatctttt ggaatatggg
     3181 ctttaacctt cttttttatt attgcttttg ttgattcatc actcatgttt attactcatt
     3241 atctattcgt aagtaccggc ttgtacgtct ctgattattt ggccaccttc aagagtcagc
     3301 actctttttc tgaaataatc taccattgca tggtcgtgtg tggaaacaag taccgtgata
     3361 cctttttgat taatttgttc caaaatctgc atgatttcca tagagttttt ggggtcaagg
     3421 ttaccagtag gctcgtctgc aatcagtagc ggcgggccgt ttacgattgc tcttgcaatc
     3481 gatactcttt gctgttcacc acctgagagc tctgttggtt ttgctttcat tttttcaagg
     3541 agccctacta cttttaatgc cccggttacg cgagcttcaa tctcttttga gctcataccg
     3601 agtgttctta ttacgtaagc gcagttgtca tatacgctct ggttcattaa aagtttgtaa
     3661 tcttggaaaa caatccccat acatcttctg aggttaggca ccttttcaga cggaaggttt
     3721 gctatattga taccgccaat cattacgctg cctgttgtgg gagtttcttc tttatataaa
     3781 agtttcatca aagtggattt tcctgcacct gatgaacccg taataaaaac aaattcgccc
     3841 gacataatgt ctaaattgac atttttcaga gcgtaattgt ttttatattt ttttgtaaca
     3901 cctcttaatt gaatcatatt attttaccaa attttcgtgt acggtctcta ttataacctg
     3961 aataaggaac aatggcaaag ccggaaaaat ccttttaaat cttgatggtt ctttaacagt
     4021 tctgtacaac cactccagtc ccattttttg gtagatttca ggtgctcttt ttaccattcc
     4081 tgaccaaaca tcaaaacttc ctcctacacc tataaatata gtgtttggca tttcttgctt
     4141 gagttttgct atcaacaatt cctgctttgg ggcaccaagt gcaacaaaaa gcacccttgg
     4201 tgctatggct ttcaattctt ctttaattat gttttcttca tcttcagaaa aataaccgtt
     4261 tcttacataa gtaatgttga gattttcaaa ttcatttctc aaattttgcg ctgctttttg
     4321 cacaacttct tcttttgcgc cgagcagccc tattgtaaag ccttcgagtg cagacattgc
     4381 aataagtttt tttgaaaact caattcccgg tatattttct tgattaatgc ctttcatttt
     4441 caaagcaatt tttataccca ctccgtcagg aatagacata tcagcttggt ttaaaaccct
     4501 gccgaattcg tcatttttgt tgcccgatgt aatcatctcg gggttaattg ttacaatatg
     4561 cataccttta ttttcctgca gatgtttatg cacaaactga agcgcttctt caaatgtaaa
     4621 caaatccact tcaaacccga gtatcggctc tttttttctt agtaaacatt ccataatata
     4681 taattatata agggtactgt tctcttgtaa agattttata aagacccttt ttatgggtgg
     4741 tagaattgaa taatagatta gaaagtatga ggaaaaggag atttatatga ttcctatagt
     4801 tgatttaaaa agacagtata aacaaactgg tgaagaaata gaaaaagccg ttgtggacgt
     4861 tttgcgctca ggtgcttata ttctgggccc taatacaaaa gcgctcgagc aagaattttc
     4921 tcaatatctc ggcacaaaac atgctatagg tctcaactct ggaacagatg ctcttcacct
     4981 tgctttgcgt gctcttgata taggcaaagg cgacgaagtt atcactgttg ctttcacatt
     5041 tgttgctact acagaatcta ttgaaattgt cggtgcaact cctgtgtttg ttgatattga
     5101 tcctgataca ttcaatatgg atgtaactca aattgaagat aaaattacac cgcgtacaaa
     5161 agctattatg cctgtacacc tttacggcca gcctgctgat atggatgtaa tcatggatat
     5221 tgcaaaacgc cacaatcttt atgtaattga agattgctgc caggctgttg gtgcagaata
     5281 caaaggtaaa aaagtaggtt ctttcggtga tatcggtgct tacagcttct ttccaaccaa
     5341 aaacttaggc ggaatgggtg acggcggtat ggctgttaca aacagtgatt tcttgaaaga
     5401 cagaatgatt gcattaagaa accatggcgg tgccgtaaga tatcaccacg atgaaatcgg
     5461 tgttaacagc cgtcttgatg aaattcaatc cgcaatactt cgtgtaaaaa tgaattacat
     5521 tgacgaatgg aacaaaatga gacgcgaagt tgctcacaga tatacagaat tgttcaaaga
     5581 ctgtgaagat gttatcacac ctaaagagct agatgagact tactgtgtat accaccagta
     5641 cactatcaaa gttcctaacc gcgatgctgt tcaaaaaatg cttcaagaaa acggtgtggg
     5701 cgcaatgctt tattatccta ttccgttgca tatgcaaaaa gtgcacgctc acttgggcta
     5761 caaaatgggt gaccttccaa aaaccgaata caatacacaa cacgttatga gtttgcctat
     5821 gtttgctgaa ttaacagcag aagaacaaaa agaaatagcg actaaagtaa aagatgctat
     5881 tgctaaatgt aaagcaactg caagctgcta gataattaat aattaaaaaa atcaaagaaa
     5941 cacctctttt aaaattaaaa aagaggtgtt tctatttgat tataaataac aaaattattt
     6001 attttctctt tttataatca aagtagaaaa taataaggag aaaatatgaa agtaaatttt
     6061 ggaaaagtat atgtacaaag atctataaga gctaatgaac acacaagtct taagcataaa
     6121 gcagaaaatt taatgttaga aggagaaaat agtcgatatt gtgataaaga ttattttgtt
     6181 acagaatatg actatttaga accgtctctt tcttatccga gcgtttttaa tacacatgcc
     6241 tataaagttg aagcttttaa aaataacaaa aaactcggag aacaaatata tacaaaagag
     6301 gattttttaa acaatgatac ttgggagatt ttgtctcttg aaaacaatta aatatttata
     6361 aaactattca cctgtaatat aattataggg gatagttttt taggattttg tatggaaaaa
     6421 aaatacgatt tgggtataat aggcggagga cctgcgggtt acagtgcagc aataagagca
     6481 gcacaaaaag gtctgaaagt cgtacttttt gaaaaagact gcttgggcgg tgtatgtttg
     6541 aacagaggct gtatcccgac aaaaacaatt ctccactgtg cagacttcta caagagtctg
     6601 aaaaaagcag aaaaattcgg agtttcattt ggtgaaaatg cagctttgtc agcagattat
     6661 caaaaagttt tcaatcgtaa aaacgagatt gtctcaaaaa ttcaaaaatc tttgacaaaa
     6721 ctcgtccaaa gctacggtgt aacaatcgta aacgaaacag cgctgatagc agacacaaat
     6781 attatccacg ccggagggat ggcctattcg tgcaagaaca ttatccttgc aacaggatcc
     6841 aagccctctc aaatcaacgg gctcgaatgc gacggcaaat ttattttaaa ctcaaatgac
     6901 gtgctttgtc ttgagtcctt gccggaaaat attctggttg tcggctcggg agcaataggg
     6961 gttgagtggg ccagaatttt ttctggcttt aacaaggcgg ttacagttgt ggagttggct
     7021 tcaaagctct tgccgcaagc tgatacagat gtttcaaaaa ggctggagcg tttgtttaag
     7081 aaagaaaaga taaaatattt tactcaaaca aaaatagaaa aaatcgaaaa ccatgacgtt
     7141 atactatcta acggacaggt gttaaagccg gatatgattt tgtgcgcaat aggcagagaa
     7201 ccggtattgc ctgtgtgcga aggtattgag atagaaaaag acggaaagtt tgttaaagta
     7261 aaccaaaatt ttcagaccaa ttacaaaaat atttttgcaa ttggtgatat aaacggcaaa
     7321 cttcagcttg ctcacagcgc gcagcatcag gctataggcg ttgttgatta tattgtcaaa
     7381 ggtgatgacg ttcattttga caaaaatctt gtgccttcag ttatttatgg cagcccggaa
     7441 attgcctggg tgggcaaaac agaagaagac ttaaacgctg aagactataa agtatcaact
     7501 ttcccggtag cagctcttgg aaaagcacag gctgatgatg aaatagatgg attcttaaaa
     7561 gttattgaac aaaacggaaa aatagcaggt gcgcatgctg tcatgcccga ggcatcatca
     7621 ataatccaac agtttgcatt gatgatgacg ggtaatattg atgtcaaact tgcactgaaa
     7681 acggtttttg cacatccgac atattcagaa gctgtgtttg aaagtttgct ggggctggaa
     7741 gatggctcaa ttagccttcc tcctgtttaa aatatgacaa aacaaatatc tgcgctaaac
     7801 taaagttatg gaaagaaaac gtttacccga ttatctaaaa agaggaatca tagacacaga
     7861 aaagacaaaa cttgtgcgtt ctatactcaa gcacaaatgc ctcaacacag tgtgcgaagc
     7921 tgcacgctgc cctaataagg cagaatgcta tgcaaaaaat accgcaactt ttttgataat
     7981 gggcaatatt tgtacacgta actgccgttt ttgcaacata tctggcggaa ccccacagag
     8041 cattgacccg gaggaacctc ttaaagttgc acaggctatt aaagagttga acttagaata
     8101 tgctgttatc acatcagtaa cccgtgatga tttgcctttg caaggtgctg attgctttcg
     8161 taacgttatt ttagaaacaa aaaaactgtg tccttctatc aaaatagaag tgcttactcc
     8221 ggattttgaa ggtatacacg accttattga tatagtagca gacgcaaatc ctgatgtttt
     8281 taaccataat attgaaacag taagaaggct atatcctaaa gcacggcctc ttgcaaagta
     8341 tcatcgctcg ctggattttt taaatcacat aaaagaaaaa tatccaaaca tgaaaacaaa
     8401 atcaggtctt atggtaggcc ttggcgaaac ttttgatgag ctcaagcaga ctttttttga
     8461 tcttgatgcg gtaggatgtg atatagtcac tgtcggacag tacatgcagc ctacaaaaca
     8521 tcatttgccc gtggaaaaat attatacgga taaagatttt gaaaatgtta agcagcttgc
     8581 aaaacaggca ggtataaagc aaatcgtggc ttccggtctg gtgcgcagct cttacagagc
     8641 atttgaaaca tataatgata caaattatta acggcctatt ttacactttt gcatttttaa
     8701 tttaaaataa tatcagattc aaatatttga caaaagtatt actgaaaagc gagaagaaat
     8761 tggacattag tacaaaagct gctataagaa aaagtctgtt agagtataac gagcttatag
     8821 aaactattgc caaaattgag tttaaaaaac tttcttcatc atatttaatt gatttttcag
     8881 agcttgtaaa tataggaacc caggttgttc atcacctgtg ctcaacctcg gatattacaa
     8941 attacaacaa ttcttacatt tccacagcca taaaatgggc aataagaaac gaagtaagaa
     9001 gaagatataa atggtactct caaaaaacca aaaaagaagg ggtatctaat tccgatgctc
     9061 aaacagcaaa tgaagatata agagaagctg tttataaaac aattttgtct attgacgaaa
     9121 tggcagaggc tgaaaatcct acacagataa aagatgatgc acaaacacct gatgagctgg
     9181 ctgcttttca ggaaatgagt catgccatta aagaagcaat gaaactttta ccccaaagag
     9241 aacgtgattt aattgaagca aaattctttc aagataaaaa gcttcgtgag ttgtcagatg
     9301 acttcaacat ttcaccttca cgtatttcaa gaattattca atcaggcctt aacaaaataa
     9361 gaaaagagct ggaaaaaaat aatctggctt agctaaacag cgcttttaca aaatcctgtg
     9421 catcaaaatc cttaaggtct tccatttttt cgcctacacc gattaatttt actggcagat
     9481 tcatttcttt tgcaatggca attataatgc cgcctttggn nccgtcaagt ttagtgagtg
     9541 ctactgatgt aaggttaaca cattctgtaa acacttttgc ctgagacaac ccgttttggc
     9601 ctgtgttggc atccagcaca agtatagatt ctcttaaagt ttcaggcgca tttttatcaa
     9661 taactgattt tattttagac agctcttgca taaggttgaa tttgttttgc aatctgccgg
     9721 ctgtatcaac caaaataacg tcgtagtttt cattttttgc tttttgtatt gcatcataca
     9781 caacagacgc agggtcggca ccgtcatttc ttacaatatc cgcacccgct ctttggctcc
     9841 atatattgag ctgttcttct gctgctgcac gaaaagtgtc tcctgctgcc acaagaactt
     9901 ttttgccctg ctgtttaaac ctgtttgcca gcttgcctat taaagttgtt ttgcctgctc
     9961 cgttaacacc tacaataaaa tatagattca attcattgtc tttaaaattc aattcgtttg
    10021 aaccggcacc ggttaatatt gatgagaact cgttttgtaa gtactctcta acccgagaag
    10081 gtttcatttt attttgtttg cgtagcttgt caacaatacc ggaggctgtg ttgaccccga
    10141 ggtccgcttt tatgagcagc tcttccatgt cgtcaaggat aaattcgtca aattcttctt
    10201 cgttttcgat ttgttttaca acattgccga caagcgattg tgatgtgttt tcaattgttt
    10261 tttttaagga ttcaaacgta agggagaaaa tgcttttttt ctcactctgc tcttgagcgg
    10321 cttgttgctt ttgaggtttg ttttcatctt ttttcttaaa aaaatcaaac ataattttta
    10381 atcacactct tattgctctt ttttttcatc aattactttg ccgagtattc cgtttataaa
    10441 agaggatgaa tcgtcagtag aatatttttt tgcaagctct aaagcttcat ccacaacaac
    10501 tttaacgggt acaccttcaa taaaaagaag ttctgcaatt gcaattctta aaatatcttt
    10561 gtctattttc accagtctgt ctaaatccca gccgtgagca tatttttgaa taagagaatc
    10621 aatttcttga gcatgttctt tatatgctgt tgctatttgt acaacatagc tttttacatc
    10681 accggtatgc tcaagtgctg tcatttctgc aatttccaaa gcaagcacaa ctttttctga
    10741 aatatttaaa agctcttcca gtcttccgct caaatcagaa gtcataggca ggggcacagg
    10801 cacattgttg gcatgcatcg ggcgtttaag gttttcgggg ctttctgctt cgtatgtatc
    10861 aacatattct ttcattgcat tgatagctcc gacagatact tttaattcat caatagcatt
    10921 gtttgttagt gttcgtactg attttaggat aatatcttca aactctgttt gattatattg
    10981 tgtaattttt ttatcaaatn naaaataata ttaaagccaa ttctcttgca gctcttcttg
    11041 cttgcatttg ttcttccttt tcttgctaat acttatattt attatagaca taaaaaaaaa
    11101 gatttgaaac aaatttttag tgctattata aatttattat gattaaaaga agattatcaa
    11161 aacaaatccg gataggtgat gtaaaaatag gcggcgatgc tcctgtaagc gtccaatcaa
    11221 tgtgcaatac cgacacacgt gacgtaaatg cgactgttca acagataaaa gagctggaag
    11281 atgcaggttg tgagattatc aggcttgctg ttcttaataa agacgctgca tcagctgtaa
    11341 aagaaataaa aaaacaggta aaaattcctg tcatagctga tatacacttt gactaccgtc
    11401 tggcaataca gtgtattgaa aacggaatcg atgctttgcg cctcaacccc ggtaatattg
    11461 gcagagatga aaatgttaaa aaggttgtta gcctggcaaa aattaacaac gtgcccataa
    11521 gaatcggtat taatgcaggc tctttggaaa aagaatttgc agcaatggat attcctttgc
    11581 atgaaaagat ggtaaaaagt gcaatgcggc atattcaaat ccttgaagat aacgattttg
    11641 ataaaattaa aatctctctt aaatcaagca gtgtgccaac tactattgat gcttacagaa
    11701 tgattgcagg catggtagat tatcctttgc atttgggtgt tactgaatca ggcaccctaa
    11761 aaggcgggct cataaaatct tctgtcggtc ttggtaccct tctttcagag ggaataggtg
    11821 atacaatcag agtatcattg acagaaaatc ccgtagaaga agtgcatgca ggattcggga
    11881 ttttaaaatc tcttgaactg agacaaaaag gtattaattt tgtttcttgc ccgacatgcg
    11941 gaagatgtca gataaacttg atagaactcg caaaaaaagt agaaaacgca ttacaaaata
    12001 ttgataaacc aattacagtt gcagtaatgg gctgtcctgt caacggcccg ggcgaagcaa
    12061 aacatgccga ttatggcgtt gccggtgcaa ttaaggaagg gtatattttt aaaaaaggtg
    12121 aaataattaa aagagtacct gaaaatgata ttttacctga attgttaaaa ttaattgaaa
    12181 acgggaatta aatctatata aaatagagca taagaaggat ttgcctaaaa acgtaaaata
    12241 atatactata tataatatta aataacgcga ggtttacaga tgaaaaattt gacaaaatat
    12301 gcaatggtgt tggctgttat tacagttgct gcgacagctg ccaatgctga aatttccgta
    12361 aaagatacaa tctctcccga gtttattcac aaccagggat attctgcaga agtttcaaga
    12421 attatcgatg taaaaacaaa agaccctgtc acaccaattc caacagaaga aaaacagtct
    12481 gtatggaaag atatcggttg gacattgttg gaaactcttg accctacagt ggaaagacca
    12541 aacaaatttg cagaccatga aacaaaatac cactcttctt ttgaagatct ataatttgta
    12601 aaaaaagaag taaaaaagag cttttggaaa ttatccaaaa gctctttttt tatttatgat
    12661 ttcagtaaat tgtaaagaaa tgttaagctg gtttgacttt tttataaaca tggcaaaaac
    12721 catggcatgc atgtgtttcg ggtgtatttt ttacacaacc gtattgtaat aattagcaat
    12781 agtttgtc
//
LOCUS       DABS01000160            6184 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9438, whole genome shotgun sequence.
ACCESSION   DABS01000160 DABS01000000
VERSION     DABS01000160.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6184)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6184)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6184
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..234)
                     /locus_tag="CPT85_07155"
     CDS             complement(<1..234)
                     /locus_tag="CPT85_07155"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21900.1"
                     /translation="MKRFLTSGFILIFCSLMLPAFADDGDFWDEPMKIDSDAKNQQRA
                     VTDQEFEKVMKFFERKKKKKEDKNKPKGAPIGPQ"
     assembly_gap    282..283
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            332..1087
                     /locus_tag="CPT85_07160"
     CDS             332..1087
                     /locus_tag="CPT85_07160"
                     /inference="COORDINATES: protein motif:HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21901.1"
                     /translation="MDREEILNKAGEAVAQKNFGEAKQLLEDYIKEINDTDIEVEKTL
                     GLCNVNLDNYAEAKENFEKVVEVNDDDATSWFYLGMIYEGLNDIEKAQKAYEKVIVLR
                     EDYKDAYKNLAIVHLKLKNHDTALEFASKALVIDNTDYQIHYIMGTAYTAKKEYEKAV
                     ASLLEGLKLKPDHALMYNNLGSCYLALKMIKEAQEAFEKAVELDNSNATSYYNLATAL
                     QLQQKHKEXKKLLNTLKNLMKLNHPSFICLQQR"
     assembly_gap    1011..1012
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1270..2121
                     /locus_tag="CPT85_07165"
     CDS             1270..2121
                     /locus_tag="CPT85_07165"
                     /inference="COORDINATES: protein
                     motif:HMM:PF12895.5,HMM:PF13432.4,HMM:PF14559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21902.1"
                     /translation="MGQRLADCYEKTGNLQMAKNTYTNLIRLGKIPADVYYRYAILCM
                     KTDDKDKAETIFKKVIQLDPKNPYAHKDLGVVYLSQRLFDYAKDEFETAYKMAPEDSA
                     VVFEMANFYHAMNDFQKAKELYEKAFKLAPEVMDIAVFRAINYLRLNEIDTALELFLD
                     AMKKYPSQHIILFNIGLIYYQKGNFDAAKEFLSDAYSLYQDPETMNALAMTFYELKEY
                     ENAKNLAHKLIEQFPDNINLLLLLAKSYIELGDAQNSVKYLEKIMEIFPEQPEAKELY
                     DRIKGVI"
     gene            2121..2486
                     /gene="queD"
                     /locus_tag="CPT85_07170"
     CDS             2121..2486
                     /gene="queD"
                     /locus_tag="CPT85_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013010661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="DAB21903.1"
                     /translation="MYELKVISSFSAAHHLLNYEGECENQHGHNWKVEVYLKGENLDK
                     SNILVDFKVLKKELKKVLDTLDHKDINELPEFKNISPSSEILAKYIYEQMNKIFPQVS
                     KVGVWENENSCSMYYEQWD"
     gene            2509..3381
                     /gene="uppP"
                     /locus_tag="CPT85_07175"
     CDS             2509..3381
                     /gene="uppP"
                     /locus_tag="CPT85_07175"
                     /inference="COORDINATES: protein motif:HMM:PF02673.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphatase UppP"
                     /protein_id="DAB21904.1"
                     /translation="MNLIQAIIMGLIQGLTEFLPVSSSGHLVLTSSLYKYFTHKEFVT
                     GSSEEVVFDIVLHVGTLLAVILFFKDDILKITKAFINACIKKDFSDPEAKLAGFILLG
                     TVFTILVAFPLKIVSESLINLPYIVGIFIFITGCILYLGEWASEKKAVKTDKVDLKTA
                     IIIGLAQGIASIPGISRSGSTISTGIFLGLDRVACARYSFLLSLPIIIGASIFYPVLE
                     VDFHEFLQYNWLAFAVGFVVSFISGYFCIKYFLQFLGKHSMKIFAYYCWIAGAGXFSL
                     NFLLNKTSYYPLFT"
     assembly_gap    3326..3327
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3390..3911
                     /locus_tag="CPT85_07180"
     CDS             3390..3911
                     /locus_tag="CPT85_07180"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21905.1"
                     /translation="MANNSKITMENMGEVRNMVSAVGSIGSYAASIFQYQGLQSTSNV
                     TTDSTAISFDDMVSNGMIDVSSDDSSSTGVTAMGGGSGGGSGSSSGSNSEMDLNGDGQ
                     VTSDEVIKYMQMQMMEKMSEQMSSDDGTTMMGQQSQQLNNGIEEFKNKQAASAYQSVQ
                     NSLIDMITDSFMI"
     gene            complement(4066..4356)
                     /locus_tag="CPT85_07185"
     CDS             complement(4066..4356)
                     /locus_tag="CPT85_07185"
                     /inference="COORDINATES: protein motif:HMM:PF06949.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21906.1"
                     /translation="MTNHEEMEEQLIETVDEEGNIINFELVDIIDMDGQEYGLLLPKE
                     ENDDPEEEKEVVLMRLTKEGEEYVFEMIEDDEEFNKVVDYIDSLEETEEDAQ"
     gene            complement(4379..>4755)
                     /locus_tag="CPT85_07190"
     CDS             complement(4379..>4755)
                     /locus_tag="CPT85_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005587896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="DAB21907.1"
                     /translation="GIALSDFLLLTAQPCETILREPEKEAIEKIAQICAQNNVKKIIV
                     GLPKNMNGTIGEQAHDCEKFSNLLKLKMPECEIIFEDERLTSRQAENILALQGKKYTK
                     NKGLVDLKSACIILQQYLDRTN"
     assembly_gap    4756..4785
                     /estimated_length=30
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1950 a         1147 c         1115 g         1936 t
ORIGIN      
        1 ttgagggcct attggagcgc ctttgggttt attcttatct tcttttttct tttttttcct
       61 ttcaaaaaac ttcatcacct tttcaaattc ctggtcggtg acagctcgct gctggttttt
      121 tgcatcagaa tcgattttca taggttcatc ccagaaatcg ccgtcatcag caaacgccgg
      181 cagcattaag gagcaaaaaa tcaatataaa acccgaggtc aaaaatcttt tcataattct
      241 ataataatgt tttttagaat taagtaaaga taaaacaatt tnntttttat gattattgta
      301 aaatggttat gtaacacaat gaggtggtat tttggataga gaagaaattt taaataaagc
      361 aggagaggca gttgcacaaa aaaactttgg cgaagcaaaa caactgcttg aagattatat
      421 aaaagaaata aatgacacag atatcgaggt tgaaaaaacg ctcggactct gcaacgtcaa
      481 tcttgacaat tacgctgagg caaaagaaaa ctttgaaaaa gttgttgaag taaacgacga
      541 cgatgctaca tcgtggtttt atctcggaat gatttacgag gggctaaatg acatagaaaa
      601 agcgcaaaaa gcctatgaaa aagttattgt cttaagagaa gactacaaag atgcatacaa
      661 aaatcttgca attgtgcatt taaagctaaa aaaccacgac acagctttgg agtttgcgtc
      721 aaaagcgctt gtgatagaca acacagacta tcaaatccac tacattatgg gaacagccta
      781 cacggcaaaa aaagaatacg aaaaagccgt tgcatccttg cttgaaggcc tcaagctaaa
      841 acccgaccac gcattgatgt acaacaatct gggctcttgt tatcttgctc tcaaaatgat
      901 aaaagaagca caagaagctt ttgaaaaagc agttgagctt gataactcca atgcaacaag
      961 ctattacaat ctggcaactg ctcttcaatt gcagcaaaag cacaaagaat nnaagaagct
     1021 tttgaatact ttaaaaaatc ttatgaaatt gaaccatccg agttttatct gtctgcagca
     1081 gcggtaggtt caatcaacgc agaaagctgg cacaatgcaa tagtttatta ccagaagctg
     1141 attattgctc atcctgaaaa acagaatttt caatacaatc ttgcaactgc ctaccagcag
     1201 acaggtaagt acaacgaagc aattaaactt ctcacacagc ttgtcgccac aaatccaaag
     1261 tctgttgcaa tgggccagag gctggcagat tgttatgaaa aaacaggcaa tttgcaaatg
     1321 gcaaaaaaca catacacaaa cttgataagg ctcggcaaaa taccagctga tgtttactat
     1381 cgttacgcaa ttttgtgtat gaaaaccgat gacaaagata aagcagaaac aatcttcaaa
     1441 aaagttattc agcttgaccc taaaaatccg tatgctcaca aggatttagg tgttgtttat
     1501 ctttctcaaa gactgtttga ctatgcaaaa gacgagtttg aaacagcata caaaatggca
     1561 ccggaggatt ctgcagtggt atttgaaatg gcaaatttct accacgcaat gaatgacttt
     1621 caaaaagcta aagaattgta tgaaaaagcc ttcaaattag caccggaggt tatggatatt
     1681 gctgtattca gagcaatcaa ttatctaagg ctcaatgaaa tagacactgc tcttgagctg
     1741 tttttagatg cgatgaaaaa atatccatca cagcatatta ttctgtttaa tatcgggctt
     1801 atttactatc aaaaaggcaa tttcgatgcg gcaaaagagt ttctctccga tgcctacagc
     1861 ctttatcagg accctgaaac aatgaacgct ctagcgatga ctttttatga gcttaaagaa
     1921 tacgaaaacg caaaaaatct tgcccacaag cttattgagc aatttcctga caatataaat
     1981 ctgcttttgc tgcttgcaaa gtcatacata gaactcggcg atgctcaaaa ttccgttaaa
     2041 tatttggaaa aaatcatgga gattttccct gaacagcccg aagcaaaaga attatacgac
     2101 agaatcaaag gagtaatttg atgtacgaat taaaagtaat aagctcgttt tcagcagcac
     2161 accacctttt aaattacgaa ggagaatgcg aaaatcagca cggacataac tggaaggtag
     2221 aagtgtattt aaaaggcgaa aacctcgaca aatccaatat tcttgtggat tttaaggttt
     2281 tgaaaaaaga gctgaaaaag gtgctcgata cactcgacca caaagacata aacgaactgc
     2341 cggagtttaa aaacataagc cccagcagcg aaatactcgc aaaatacatt tatgaacaga
     2401 tgaacaaaat attccctcag gtatcaaaag taggagtatg ggaaaacgaa aactcctgct
     2461 caatgtatta tgaacagtgg gactaacaac taaagacagg acaaaaaaat gaatcttata
     2521 caagcaataa taatgggttt aattcaaggt ttgacagagt ttttaccggt atcaagctcg
     2581 gggcatcttg ttttgacctc cagtttatac aaatatttta cacacaagga gtttgttaca
     2641 ggcagctcgg aagaagttgt tttcgacatt gtactgcatg taggtactct tcttgctgtt
     2701 attttgttct ttaaagacga tattttaaaa attacaaagg cttttattaa tgcttgtata
     2761 aaaaaagatt tttccgaccc cgaagctaag cttgccggtt ttatcctgct tggcacggtg
     2821 tttacaatac ttgttgcatt tcctttaaag attgtttccg aaagtctaat caatctgcca
     2881 tatattgtag gtatattcat ttttataaca ggctgtattc tttatcttgg cgagtgggct
     2941 tctgaaaaaa aagccgttaa aacagacaaa gttgatttaa aaaccgcaat tatcattggt
     3001 ttggcacagg gtattgcatc cattccgggg atttcgcgtt ccggttctac aatttctaca
     3061 gggatatttc tcgggctgga cagggtagcg tgcgccagat attcattcct tttgagtctg
     3121 cctattataa tcggtgcgtc tattttctat ccggttcttg aagtggattt tcatgaattc
     3181 ttgcaataca actggttggc ttttgcggtg ggatttgttg tatcctttat ttccggatac
     3241 ttttgtataa aatattttct tcaattttta ggcaagcatt ctatgaaaat atttgcatat
     3301 tactgctgga ttgcgggtgc aggcannttt tctttaaatt ttttgcttaa caaaacttca
     3361 tattatcctc tttttacatg atgtaattca tggcaaataa tagcaaaata accatggaaa
     3421 acatgggaga ggttagaaac atggtaagtg cagttggttc aataggctca tatgccgcct
     3481 caatatttca atatcagggg ctgcaatcca catcaaacgt aacaactgat tctacagcta
     3541 taagctttga tgacatggtc tcaaacggaa tgattgatgt cagctctgat gacagctcat
     3601 ctacaggggt aacagcaatg ggcggcggct ccggcggagg ttcaggttca tcatccggtt
     3661 ctaatagcga aatggattta aacggcgacg ggcaggtcac atcagatgaa gtaataaaat
     3721 acatgcaaat gcaaatgatg gagaaaatgt ccgagcaaat gagctctgat gacggaacaa
     3781 caatgatggg gcagcaatcc cagcagttaa ataatggtat agaagaattc aaaaacaaac
     3841 aggctgcaag cgcatatcaa tcagtacaaa actcgctaat tgatatgata actgacagtt
     3901 tcatgattta ggcaaaaaaa aagacctttc ggccttaaaa attttgtgat tcctcgtgtg
     3961 tggtagattt ctcgtctcta atttttatcc tcgtatatat ataaagtatt tacaggatat
     4021 aaaattgcca cataaggaat gcattatgaa gaaatattaa gatgactatt gagcgtcctc
     4081 ttctgtttct tccagtgagt ctatgtaatc tactactttg ttaaactctt catcatcttc
     4141 aatcatctca aacacatact cttcaccttc ttttgttaat cgcattaaga cgacttcctt
     4201 ttcttcttcg gggtcgtcat tttcttcttt aggaagcaaa agtccgtatt cctgtccgtc
     4261 catatcgatg atatcgacga gttcaaagtt tatgatgttg ccttcttcat caactgtttc
     4321 aattaattgt tcttccattt cttcatggtt tgtcataatt tttcccctta ttattgtgtt
     4381 agtttgttct gtctaaatat tgctgcaaga taatacatgc gcttttaagg tcgacaaggc
     4441 ctttgttttt tgtatatttt ttgccctgca aagcaaggat attttctgcc tgacgactcg
     4501 ttaatctttc atcttcaaag attatctcac actcaggcat ctttagtttt aacagatttg
     4561 aaaatttttc gcaatcgtgc gcctgttcac ctattgtgcc attcatattt ttgggcagac
     4621 ccactattat tttttttaca ttgttttgag cacaaatctg tgcaattttt tcaatcgctt
     4681 ctttttcggg ttctcttaat attgtctcgc aaggctgagc tgtgagcagc aaaaaatcgc
     4741 ttaaagctat acctannnnn nnnnnnnnnn nnnnnnnnnn nnnnncccag tttttttcta
     4801 tttcttttat gcagttttca acataattta tatcgatttc ctgcaggtct ttgtttgctc
     4861 ttcttgcaaa aatagaggtt gcacttttga tgctttcata tctgtctttt tgcgatagaa
     4921 aatactcata aatactcttt ttgagcatat cttctttaaa acagttttta cattcacttt
     4981 catcaatcag agaatacagc atatctgcaa aagtttgttc attattcaaa cgggcaaagt
     5041 gcgctgaaac aagcagtctt ctgtttaata tttttaagaa agcatcatca aaaatctgcg
     5101 gcatattttc atttaacaga gtttcaattt gttttatatc acagattttg tcatcagcaa
     5161 ttttatctat caaagtagca aatttttcgt tatcagaaac ggaaaagaac catttttcaa
     5221 aatagccttt gtcatacagc tgttttaaaa gaaaatcgtt taactcaatt ttgctcaacc
     5281 cgtctgacag gtttaaatct tcataatcaa tgtctcttgt aatactaacc caggctgcat
     5341 attcgtatga aatctcctga aatttgagac gtgatatttt ctctgcattg accataaggt
     5401 atttgcacag ggtttcgtca gcaagtacaa ccctgtcgtt tgagaaaaat ttatttacta
     5461 ttctgtcaaa ttctccctct gatatttcgt taaagccgaa acagtcgata ataccgtcta
     5521 tatcattaag cacaagggca aacatttgaa tgaaagacgc ctcgtttttt cttgaaaaaa
     5581 tcagaccgat gtttccgtgc ccgtcaggaa aattgacaaa acacttgtaa acaggagagc
     5641 cagagagcag tcttttgtaa tactcttttg ttatatcctc ttttataccg gagagtttta
     5701 aaagagagag gcttttttgt acgtttgctt ttacttttaa atcgtctgta ttttcttcca
     5761 gccatttcaa cacaggatac gcaagcatag acttgctctc gccgatagcg gaaattgcaa
     5821 tttgagagat ttcgcagtaa ggattggcat agattatcgg tattaaaata ttagccaggt
     5881 tatcgccgtc ataatcctgt gtcaaagact caacaagcat ttctttttcc gcctgcggga
     5941 gtgcctctaa aaagtcaaga aagtcaatct gtgactccgg gttgaccctg gcgttttcca
     6001 acagtttaac agtgtctgcg tcaattattt catcagggtt ttcaaaataa ttaatgtact
     6061 gttcatagtt aacatgtttt ccggcttctc ttaaaaagcc tactgctttt gcttttacag
     6121 aatctttgat tttgggatta gccagagttt caaacatcac agcctcggct ttttggggat
     6181 ctgt
//
LOCUS       DABS01000161           15278 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9075, whole genome shotgun sequence.
ACCESSION   DABS01000161 DABS01000000
VERSION     DABS01000161.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 15278)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 15278)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15278
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..575
                     /locus_tag="CPT85_07195"
     CDS             <1..575
                     /locus_tag="CPT85_07195"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21849.1"
                     /translation="YSPQYNQNKQYQTFKAFNANTAKRAATKVYDRSTSWMAYGIGKL
                     ASYKPVQKVVDFFKDKNYQGHLAAITGCVLSGFYMLDTAKSKDIEKDQKLPLIINQGV
                     VCGISTVGAYTLNNYLNKKLNNAAELFHISKIEDKNMQEEFLKCKADYSYIEKLQQRA
                     KTEEKLKPVFSDLEKKFEFTNDVKVFVXXE"
     gene            559..753
                     /locus_tag="CPT85_07200"
     CDS             559..753
                     /locus_tag="CPT85_07200"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21850.1"
                     /translation="MLXQNKNDLAAKEFLKELKSIKKTADKEKADVVKELFFKKMKNS
                     VSLKAAYNRASMXXFQNSPA"
     assembly_gap    566..567
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    729..730
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(983..1909)
                     /locus_tag="CPT85_07205"
     CDS             complement(983..1909)
                     /locus_tag="CPT85_07205"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21851.1"
                     /translation="MSMNFDTYATSFQSLMSPMYNLSTNYNATINNGAVANSGANAGN
                     GTPGAGGYGNYSAYGFMSPMTNIGIGQFNADHLVKGDDKINNYYARPIATHKTKDELP
                     TILGILGTALGTAALITALCKGRGAEAAKKAGTYLGKTKGNKIKYTVPPRQVSRRHVK
                     GQKTNPTVTTSGVPTTNVAPYATTPKYLNPNTPAGPNNQMFSMLNHGLNNPTTIPQPA
                     TSNWAPKPVIYKNGTRKALPYSTRNKENITASLLPPQTAAGATKEPAQIKGLLPQRTA
                     RQQAALAKQEAAMNLPSSGQVWTLNGKTRNIE"
     gene            2117..3502
                     /locus_tag="CPT85_07210"
     CDS             2117..3502
                     /locus_tag="CPT85_07210"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005490401.1"
                     /note="catalyzes the formation of D-fructose 6-phosphate
                     from D-glucose 6-phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="DAB21852.1"
                     /translation="MLEFDYRNVLASVVGEENGLHLEEEFNNFSERTARIISDLNSRK
                     DKPGQWLQWMNLGYQEETVWLVKEYAAMTEGMFENILVLGIGGSALGGMAVCEALLKP
                     YWNLLTPEQRNKLPRIFFLDNIDPDQINGLFDVLDLKKTLVNVITKSGSTAETMSQFM
                     IVKDRLEQELGDNYRRHIVATTDRNSGILRQISNEEGYKTFVVPDDVGGRFSVFSAVG
                     LLPFAMVGIDIDALMQGIKDMDLALKNTDIRHNIAAQNALIHYLMDTRKGKNLSVMMP
                     YSTRLKYVSDWFVQLWAESLGKEKDLDGNKVNIGPTPIKALGATDQHSQIQLYNEGPN
                     NKIINFIRVKEFDTTVEIPKIFEFTGIGYLGGKTINELINAEADSTKVALVDYQRPNV
                     TITLDRVDPYHIGQLLYLLEVQTAIAGELYNINTFNQPGVEQAKNYTYALMGRAGYEE
                     SAAMLNEKMAL"
     gene            3596..3943
                     /locus_tag="CPT85_07215"
                     /pseudo
     CDS             3596..3943
                     /locus_tag="CPT85_07215"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    3909..3932
                     /estimated_length=24
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4017..6065
                     /locus_tag="CPT85_07220"
                     /pseudo
     CDS             4017..6065
                     /locus_tag="CPT85_07220"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    5153..5187
                     /estimated_length=35
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(6062..6265)
                     /locus_tag="CPT85_07225"
     CDS             complement(6062..6265)
                     /locus_tag="CPT85_07225"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21853.1"
                     /translation="MQEHELNTIMDVVSDPIKNVYDISSRKNLEEIQRIIRIFKINEE
                     QNMKTKLFAIKNLATFKLVLSNN"
     gene            6469..6723
                     /locus_tag="CPT85_07230"
     CDS             6469..6723
                     /locus_tag="CPT85_07230"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21854.1"
                     /translation="MLPIITEEHASLAFAEIFQDVHGWRKKMIHYIKEENPEINSAII
                     EAANNTDLDPKAVALGAYMTYTLIEMAAKDDAGASIDFDD"
     gene            complement(6720..7076)
                     /locus_tag="CPT85_07235"
     CDS             complement(6720..7076)
                     /locus_tag="CPT85_07235"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21855.1"
                     /translation="MSTNNHKIDEIITKLYRWCTTFKDQALFRDTTKLRNTMFDAYID
                     SNLTTALSFTIFELSDKGELIIDKQQRVLESQAAFFLFVNPKTGWIFAVKNTLENQKK
                     LLTNQPIQNFKVKIVN"
     gene            complement(7130..7318)
                     /locus_tag="CPT85_07240"
                     /pseudo
     CDS             complement(7130..7318)
                     /locus_tag="CPT85_07240"
                     /inference="COORDINATES: protein motif:HMM:PF13487.4"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    7137..7146
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(7333..8958)
                     /locus_tag="CPT85_07245"
                     /pseudo
     CDS             complement(7333..8958)
                     /locus_tag="CPT85_07245"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    7338..7350
                     /estimated_length=13
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(9022..10248)
                     /locus_tag="CPT85_07250"
     CDS             complement(9022..10248)
                     /locus_tag="CPT85_07250"
                     /inference="COORDINATES: protein motif:HMM:PF01075.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21856.1"
                     /translation="MGIVLFSVFEIDDFQLFNNNKYLYFMTPPKSLKNIKKSKSFVWF
                     LYFLYNKKMEKQINKVLILRLSALGDTIHTLPVAYAIKKTWPDCKIGWVVEDKAQLFI
                     KENPLIDHCYVIPKKTWKKRGLLSFENIKEFKNIIDEINKEHYDVVLDTQQLFKSASI
                     LPFLNIKRKVTLTGGREFYQLFSNEIYKESHKLFDPNYHVVKRNLEFAQHIGADTSEV
                     KMVLKDATNEIKEKINDFLKSLSPDKKTVVISPATTWENKHWAESHWQETIKWLKDIA
                     NIVFTGMEADNALIERILDNTDCNNYINLAGKTNLEELAEVFRRADIVISPDSGSAHI
                     AWATQKPAIITLFSATAEKRSAPFGDNCYVLAPELECRPCLKKNCRLKNKEDKNKCSK
                     LVTSGELINLLEKLLQ"
     gene            10288..10539
                     /locus_tag="CPT85_07255"
     CDS             10288..10539
                     /locus_tag="CPT85_07255"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21857.1"
                     /translation="MSSKKVLKLRQAILKYNTELIKLKDHLESSEEANLKYNQIVIKK
                     AICKKELDEARMPLVQKFFKKFAHNTDKDKKLICDYFKS"
     gene            complement(10540..11154)
                     /locus_tag="CPT85_07260"
     CDS             complement(10540..11154)
                     /locus_tag="CPT85_07260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_349490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="DAB21858.1"
                     /translation="MGYTFEIITGPMSCGKTEELLRRVKRCIIAQKKVKVISPEVDTR
                     AKGDYIESRNGLWLDAITVKNARDILSHICADDEVVAIDEIQFFDSEIVSVVRKLAEH
                     GKRVIASGLDLDFKGEPFGSMPELLCIADRVDKLTAVCMKCGSDHATRTQRLINGFPA
                     DKSSPLIMIGGDETYEARCLKCYELPDRESENKKKSFRLLSFGK"
     gene            11299..13407
                     /locus_tag="CPT85_07265"
     CDS             11299..13407
                     /locus_tag="CPT85_07265"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00072.22,HMM:PF00512.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21859.1"
                     /translation="MAKILLVSDDEKQNKLITQILSKTPAAVITSVDESAVLNYVEKA
                     LVSLVLIDESIKTLDALILCKKMQAYTLKENIAVISLVDSKTENIELLKITNACVTKP
                     VNDKILSACVASNLKLKKAVDTLSTNNSELAKSLYQLDVLYNTSTQLAGSLDKQKLIN
                     IMIDGLEKSLSFSLSSTLVFNDEHHIDLIINSLYAISPRLEHSLKLRAILSYRALFDK
                     KRIPYDLNVNDITVIKNIKHPLEEYDLNILKFDNLFAPINVGEKFFGLIEVFRESDFS
                     QEDTTCFQTLARQVSLPLENAALYEEIKKTNTKLEKLERLKSEFISIVSHELRTPLTA
                     IKNSLEICLSGKAGDVSSIMDKFLNMAKRNVTRLSGIINDLLDLSKVEAGKMDFKFER
                     TSINTPVEFIKNTFENVAKEKNIDLVLEKDDNIASTYIDNQRIEQVVSNLVSNAIKFT
                     NENGRIIVKTENIKQSDIDKTKLIGVENPVFYDEYIKVSVSDSGIGIAPEDLKKVFDQ
                     FQQIENSLNRKNGGTGLGLPIAKQLIEAHKGFIWVESEVNRGTTFAFVIPVLSEKEKF
                     ILDLDKEISKAKSCEQNVLLVALNEPAECKNSFIDAVLQEKITIIRKTSNTKEVYFEE
                     NGKKCLVFMIPEADKFAQSFIEKKIESTLCSVNAETNKEKYDILYSSVLYPDNGEDAH
                     ELMETAKDLLSKQKTEMVEA"
     gene            13411..13782
                     /locus_tag="CPT85_07270"
     CDS             13411..13782
                     /locus_tag="CPT85_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020257930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="DAB21860.1"
                     /translation="MTDTGKKILIVDDEQDIVETLKFMLEAQGYECFCAYDGEAGLNM
                     AKEIIPDLMILDVMMPKINGYKISRLLKYDNKYKDIPIIMVTARSQEDDKIIGQETGV
                     NEYITKPFELDEVIAKVKEYL"
     gene            13782..15176
                     /locus_tag="CPT85_07275"
     CDS             13782..15176
                     /locus_tag="CPT85_07275"
                     /inference="COORDINATES: protein motif:HMM:PF05157.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21861.1"
                     /translation="MEFVRNKTLEKLKYDLVRDNLIKYEDLETAEQVSEAQHVNIGQV
                     LISSGIIAEDTLLKFLESKLHIPYVNLDDYSLDKKCLNYINLNNAQKYKVIPLFEIEG
                     ILTVAMSDPLDLFAIDKIVEDAKCEIEPVISSENAILKKIEEYYTSASSVGQIFIDEN
                     RPKYDWREVLNNEELTSSLSDEHIQKLIRSILKQAISDDIHELFFEHVPNGLSVTFRQ
                     NSQNVSTGDIPTILVAPFIARLKTLSNLDPTVSELPQLGKLSFKVDDMALIASISAFP
                     TIHGERISIKIYKPPKKLEDIALDMKKINIIRNAAQKQGILLVCGSGLSGKTHMIYSI
                     LSDIADDTKNVMTIESITKYNLENVNQCELNEHIGFNLDKAMRFIEFQSPDILYFEGI
                     NTKEGLDYFTSLVFKDKTLITEFLAENIADLMKKLSLSEFSMFKSLLTCLVFLHSKDS
                     IEVFDKQALEKYFA"
BASE COUNT         5031 a         2562 c         2701 g         4898 t
ORIGIN      
        1 catactctcc acagtataac caaaataaac agtatcaaac ttttaaagct tttaatgcta
       61 atactgcaaa aagggctgct acaaaagtat atgatcgttc tacaagttgg atggcctacg
      121 gaataggtaa acttgcatct tataaaccag ttcaaaaggt tgttgatttt ttcaaagaca
      181 aaaattacca gggccacctt gctgctatca ccggttgtgt gctgtcaggg ttttatatgc
      241 ttgatactgc caagtcaaaa gatattgaaa aagaccaaaa attacctctt ataattaatc
      301 agggtgttgt ttgcggtatt tctacagttg gggcttatac tcttaacaat taccttaata
      361 aaaaactcaa taatgctgca gagcttttcc atatttcaaa aattgaagac aaaaatatgc
      421 aagaagagtt tttgaaatgt aaagctgatt attcatacat tgaaaaactt caacaaagag
      481 ctaaaactga agaaaaattg aaacctgttt ttagtgattt ggaaaagaag tttgagttta
      541 caaacgacgt taaagtgttt gttaanncag aataaaaatg atcttgctgc aaaagaattt
      601 ttaaaagagc taaaatctat caaaaagact gctgacaagg aaaaggctga tgttgtaaaa
      661 gagcttttct ttaagaaaat gaaaaacagt gtatctttaa aagcagcata taacagagct
      721 tctatgaann catttcaaaa ctctccggca tgaaaaatgc aggcaaactg cctaatatga
      781 taaacgggtt caagacagca cgttcattaa tggtatttgc tttaatatac agatttgctt
      841 ctccagtttt tgctactcct atagctaaca aagctagtga atatcttgaa aataaaaaac
      901 ataaaactaa aatgagtgca taaaaaaatc ccgcaacaat tagacttgtg cggggattgg
      961 ttaggtttta gtttttttaa tattattcaa tatttcttgt tttaccgtta agtgtccaca
     1021 cttgaccgga tgaaggaaga ttcattgcag cttcttgttt tgcaagagca gcttgttgtc
     1081 ttgctgtgcg ttgcggtaat agtcctttta tttgagccgg ttcttttgtt gcacctgctg
     1141 ctgtttgtgg gggtaacaag cttgcagtga tgttttcttt gttacgtgta gaataaggca
     1201 atgcctttct tgttccattt ttatatataa caggttttgg tgcccagttt gatgttgccg
     1261 gttgcgggat agttgtcgga ttgtttaaac catggttaag catactaaac atctgattat
     1321 taggacctgc cggagtattt gggttgagat actttggcgt agttgcatat ggtgcaacat
     1381 ttgttgtagg tacacctgag gttgttactg taggatttgt tttttgtcct tttacatgtc
     1441 ttcttgatac ttgtcttgga ggcactgtat attttatttt gtttcctttt gtttttccaa
     1501 gatatgtacc tgctttttta gcagcctctg cacctctgcc tttgcacaaa gctgtaatca
     1561 atgctgctgt acctaatgca gtgcctaaaa ttcctaatat agttggcaat tcatcttttg
     1621 ttttatgtgt tgcaattggc cttgcatagt agttgttgat tttgtcatcg ccttttacaa
     1681 ggtggtctgc attaaactga ccaatgccta tatttgtcat agggctcata aaaccgtatg
     1741 cactgtagtt tccgtatccg cccgcaccgg gtgttccatt gccggcgttt gcaccggaat
     1801 tagcaactgc accattattt attgttgcgt tataattggt gcttaagttg tacatagggc
     1861 tcattaagct ctgaaaactt gttgcataag tgtcaaaatt catagacata acctaatctc
     1921 caaactacct ttaaataatt tttaaatcta accttacata tataaaaaca atcgtttttt
     1981 caaaattgcc taaatccaaa atatttgtta agaaatatta cacaattaac aggtcgggta
     2041 ctgttctttt atctgtcagc agatacaata gatataaggt ataaatcttt tatataaatt
     2101 tacagaggag aataagatgc tagagtttga ctacaggaat gtcctggcaa gtgttgtggg
     2161 ggaagaaaac ggtttacacc ttgaagaaga gtttaacaat tttagcgaac gcacagcacg
     2221 aatcatcagt gatttgaact ccagaaaaga caaacccggt caatggcttc agtggatgaa
     2281 tcttggctat caggaagaaa ctgtatggct agtaaaagaa tatgctgcta tgacagaagg
     2341 tatgtttgaa aacattcttg tactcggtat aggcggttct gctttgggcg gcatggccgt
     2401 ttgtgaagct ctattaaagc catattggaa ccttttgact cctgaacaaa gaaataaact
     2461 cccgcgtata tttttcctag acaatattga ccctgaccag attaacggtc tttttgatgt
     2521 acttgatttg aaaaaaactc tggttaatgt aataacaaaa tccggctcta cggcagaaac
     2581 aatgtctcaa tttatgattg taaaagaccg cctggagcag gaacttggtg acaattacag
     2641 acgtcatatt gttgccacta cagatagaaa ctcgggtatt ttaagacaga tttccaacga
     2701 agaagggtac aaaacttttg ttgttccgga tgatgtcggc ggacgtttct ctgtattttc
     2761 agctgtcggg ctcttgcctt ttgcgatggt tggtattgat atagatgctc ttatgcaggg
     2821 tatcaaagat atggatcttg ctttaaaaaa tacggatatc cgtcataata tagctgcaca
     2881 aaatgcactt attcactacc ttatggatac aagaaagggc aaaaatcttt ctgtaatgat
     2941 gccttattct acaaggctca agtatgtgtc tgactggttt gttcagttat gggcagagag
     3001 tcttggcaaa gaaaaggatc ttgatggaaa caaagttaac atcggtccta ctccaataaa
     3061 agctctcggt gcaacagatc agcattctca aattcagctg tataatgaag ggcctaataa
     3121 caaaataatt aattttataa gagtaaaaga gtttgataca actgtagaaa taccaaagat
     3181 ttttgaattt acaggaatag gttaccttgg cggtaaaaca attaatgagc taattaatgc
     3241 tgaagctgat tcaactaaag ttgctcttgt tgattatcaa cgaccaaatg tgacaataac
     3301 gcttgatagg gttgatcctt atcatatagg ccagctgctg tatttgttgg aggtacaaac
     3361 tgcaatcgcg ggtgagcttt ataatataaa cacatttaat caaccgggtg tagagcaggc
     3421 aaaaaattac acttatgctc ttatgggaag agcaggatat gaagagtctg ctgcaatgct
     3481 gaatgaaaaa atggcgttat aattcttgtt ggtgtaacat taagttacat tattatacat
     3541 acgcttttgt atctgttaaa attggatgtg aagcttttta aaagagagag tctttatggc
     3601 agaaattaat tactttgaaa taatacaaaa taaattagac gcactggttg ataaaattat
     3661 tcaaaaagaa aattcggacg aggattttcg tattacatat gcccagattc tcgaaaaaat
     3721 aaatacaaag atggatatct ttgcaagcaa cgaaactgct gaacgtataa accttatcgg
     3781 tcttgagctc ggtaagttga taaaagaacg tcaggaagtt gttgattcca aatttgctgc
     3841 tgtaaaaggc gaatttgaca atcttaacca gcttgttgcg gagtctttaa aaactccgga
     3901 attgctcgnn nnnnnnnnnn nnnnnnnnnn nnaagcaaga taatcaaaaa cttacggtta
     3961 attcaattat ttctcaaatc gaaaagattg gttcactcga agaaacaaac gacaatttga
     4021 gagccaattt tgctattgta aaagagcaaa atacaattat taacgaaaat gttaataaac
     4081 aaatgtcttt gattacacag ctcaatgagc ttgctcaaga ttgcaatcaa aaggctcttg
     4141 aagatctaaa tactattata tttagcttga aagaattctc tgaatcttta aacgacgatg
     4201 taaaagagat aaaagatttt gttaatgaaa aagttgaaac tattatcaca aaggttcatg
     4261 agacagactc ttttatagaa attttaaata acaatttaac aacacttgta aaagtagttg
     4321 gaaatatttt tgatgatgaa gaatttgcct cattaagaga cgatgttgca gaactgcttg
     4381 taaaagcaaa ctttctttct gaatccgtta gcaaaattgc tactaaagaa gagcttttag
     4441 ataattctga aaagaataaa gatgaaataa aaaaacataa tcaggaatta ataacagaat
     4501 tagaaaacaa aattgtttca aagctcgatt tctccgatat tggagatatt aaagattaca
     4561 cagaaaagat gttcttccag ggcacagaag tactgaaaga agaaatctgg tctattaaag
     4621 acactgttaa taatgtaaat tcaaatgcag taagcaagga agattttgat aacaaacttg
     4681 ccgagctaaa agctttgaac aaccagatta aagaagatat cacagatatt atctcagaag
     4741 aaagtgtcgc tgcttccaac cagataaatg aaatatcagc aacaattgaa gctttaaaaa
     4801 atgatatctc aaatattata ttaaatgagc agaatgaaca gataacaaca gctttgcaaa
     4861 atctgcaaac aaaatttgtt tcacaattga ttcaaatagc tgacaacata tcttttgcgc
     4921 aggatgcaga agaaattaat gacaatatct ttaattgttc tgacgaaatt aaagaaaaaa
     4981 tttcggccga cattactgat ataaaacagg aaatagaact tttaaaaggt gttagtgact
     5041 ctgaaaacgc aaatattgtt aatcttttga caaagattga tgatgcgcta aaaactgata
     5101 tcaccagtga tttaaaagca ttaatttccg gattcaagct cttaacaaca ggnnnnnnnn
     5161 nnnnnnnnnn nnnnnnnnnn nnnnnnntgc ctgacattga atcagacctt tctaaaataa
     5221 gattagactt aaataatatt caaaaagtgc ttattgatgc agaaaatggt tctgatcaga
     5281 gcagctctga tattacaact aaaatcaaca atatcaaatc agctgtggaa agactgcaag
     5341 aaagccctat aacagcagaa gttgctgata ttaaagaact ttttgatcat ttaaatgaag
     5401 atatagcaag catcagtaaa agaacgaata aacttattat ctcttctgat gagcttacca
     5461 aggtgttaaa ggctaatatt gcgtctttta cctccttgat taatactttt gaaaaacaaa
     5521 gcagagaatt ttataactcg gcctttttaa atgatataaa tacaaaaatt gatgctataa
     5581 acaagggtac aaatgcaatt ctcaaatccg accaggtttt gacagaagcc tttatgtata
     5641 tgggtgaatg gattgacagc gccagtgact cttttgatga aatcaaaaat gatttgtcca
     5701 agattaaaaa gaatgtgctt tcagaagatg acagcgcaac agaaaaactt gaaatcagcg
     5761 ttaaaaatct ttctcaacgc atagatgttc aggaagctaa aattgactct gttgatgaca
     5821 aactcaacaa aattattact caacaaaatg agtctaaaga attaaaatct ttgttagagt
     5881 atgttgcgtc tcaagttagc gttacaaacg aaaaaataat cgaaaacgat aagctttctc
     5941 aaaaaattgc aagcatggaa aaacagttga aaaaaataga aaagaattta gctgttataa
     6001 ctgaatatat cgatgaagaa gacgcacagg atgacgaatt ctacagcgac gagcctgtaa
     6061 attagttgtt gctcaaaaca agtttgaatg ttgcaaggtt tttgattgca aacagttttg
     6121 ttttcatgtt ttgttcttca tttattttaa aaattctgat tatacgttga atttcttcga
     6181 gattttttct tgatgatatg tcataaacgt ttttgatggg gtctgaaact acgtccataa
     6241 ttgtgtttaa ttcatgttct tgcataatta cttatttcct ctaaaactct atatttctat
     6301 aaagttattt tgaaaaaaaa aattgccttt attttgttaa aatgttaaca attatataca
     6361 aagtatataa ttgttggttc aaatgttaag atatacttga aatagtggat aaaaacaaaa
     6421 caatttagta tataataaat gacataaagt ttgatataag gagaaaatat gttacctatt
     6481 atcaccgagg agcacgcttc actggccttt gcagagattt ttcaagatgt acatggctgg
     6541 cgcaaaaaaa tgattcacta tattaaagaa gaaaaccctg aaattaacag cgcaatcatt
     6601 gaagcggcca ataatacaga ccttgaccct aaggcggttg ctcttggtgc ttatatgaca
     6661 tacactctta ttgaaatggc tgcaaaagat gatgcaggcg cttctattga ttttgatgat
     6721 taattaacaa ttttcacttt aaaattttgt atgggctggt ttgttaacag ttttttctgg
     6781 ttttcaagcg tattttttac tgcaaaaatc caccctgtct tcgggtttac aaacaggaaa
     6841 aaagcagcct gactttccag cactctttgc tgcttgtcta ttatgagctc acctttgtct
     6901 gaaagctcaa atattgtaaa agaaagcgct gttgtaaggt tactgtcaat atatgcatca
     6961 aacattgtgt ttcttaactt tgtcgtgtca cgaaacaaag cctgatcttt aaacgttgtg
     7021 caccagcggt atagctttgt tattatttca tcaatcttgt ggttgtttgt gctcattcat
     7081 taatccaaca aactcttcaa cgagtttttc attccacttt ttgcctgctt caagccnnnn
     7141 nnnnnncttt agaacgagca actctgtatg ggcggctttg tgtcagtgca aaatatgcgt
     7201 caattaaaag tataatctgc gatgaaacag gtatttcgtc cccgcttaac ttttgaggat
     7261 aacctgttcc gtcccaattt tcatggtgtg cttctataat aggtacaata tccgccacag
     7321 ctgtaattgg ctttaatnnn nnnnnnnnnn atgctctttt atctgttgtt tttcttcatc
     7381 tgtcagaggt tcttttttat taagaatttc ttcgggaatc atcaatttgc ctatatcata
     7441 gagcatcatt gcaattttga gcttatctat atcttctttt gtcagctcca tttttcttgc
     7501 aagttcaatt gccattgata cttttgcctt tgtcaggcct cttttgtaat gattattgta
     7561 tgtctgcgca attgtgtcag ctacggaaaa gagcgtgtct tttgtttcaa ttgtgctgat
     7621 agacttaagt ttagatgtaa tttcttttgc aattttattc ggtataggca ctttttgttt
     7681 tgtgagaata tccataaagg cgccgaatgc aacttcatgc cattcagcct cgtcatctgc
     7741 acttttggcc attgttacac ggtttcgtcc gttgattttt gacttataca ttgcctggtc
     7801 tgtcatatca agcaattcat caagttttat agaatgttcg gggaacgttc caacacctac
     7861 actggccgtg atatggccga ttgtatcaag ctcctgggct tcaattgcag cacgtattct
     7921 ttctgctgct atcatcgcac ctgatgaatc aacaccggga agcaaaaccg aaaattcctc
     7981 gcctccaagc cttgccggaa catcgattga acgagcattt tttttcaaaa tatcagcaat
     8041 tgttcttatc gccaagtcgc caaaaaagtg gccgtatgtg tcgttgattt ttttgagata
     8101 gtccagatca aggctgatta aagaaaacgg ctgatgaaga cgttgagcac gctctgcttc
     8161 tttttgcaac gcctgattaa aatatcttct gttataaagt tctgtcaaag aatcagttac
     8221 agcttctttt ttcagatttt caaaaagatt tgctatagta attgccatct caacctgatt
     8281 tgcaaaaaga gtgaaaaaat tgagttcttt gtctgtaaca tcctctcttg gcgaaaatac
     8341 catcatcacg ccaaaaggcg aatttgacgg tgaaagcggg atgcaaataa cacttttgct
     8401 tacacccagc ttattaatca tttctttatg ttctggctta aagtcataca aaagattgtt
     8461 gattacctca aggtaatctt ttgtataaag tatagatttt tcttcaattg ctcttgtaat
     8521 gagcattctg gggtcatatt tcaggtgata ttcgtgtata tcaatatttt tttcattcaa
     8581 aaagcctata agctttttaa aaataggact ttccgaaaaa gccttgacct tgtagtactt
     8641 gcccttgtca tcattgcaaa cctgcaaaat tgtactgttt atgtatccca tttctccatg
     8701 cagagagtta acaagctttt gtaaaacact tgataaaggc tctgaggagt tcataagctc
     8761 ccatacatgc tttaatgtta aaaaagcttt gtttgcctga tcaagctcct gggttctttg
     8821 cacaatctct ttttccagtg caagatttct ttcatatatt tcaatgaatt cttttttgtt
     8881 attagagatg ctgtattcta tttcattaac ttttcgggta tagtctttga attttttaaa
     8941 taaatccatt ttcaccaatt aaattgactt ttataaacac gtgacgttat tatactactt
     9001 ttttgtcttg aatgtaagtg cttattgcaa aagtttttcc agtaaattta taagttcacc
     9061 agaagtaaca agcttagaac atttgttttt gtcttcttta ttttttagcc tgcaattttt
     9121 ctttaaacag ggtctgcatt caagttccgg cgctaaaaca taacagttgt caccaaaagg
     9181 cgcgcttctt ttttctgcag tggcactaaa aagagtgata atcgcaggct tttgtgttgc
     9241 ccaggctata tgagcgctgc cagagtccgg agaaattaca atatcagcgc gtctgaatac
     9301 ttcagccagc tcttcaagat ttgttttgcc agcaaggttt atgtaattat tgcaatctgt
     9361 gttatccagt atacgctcaa taagagcatt gtccgcttcc atccctgtaa aaactatatt
     9421 ggctatgtct tttagccact ttattgtttc ttgccagtgg gattctgccc agtgcttgtt
     9481 ctcccaggtt gttgcaggcg aaatcacaac tgttttttta tcaggtgaca aactctttaa
     9541 aaaatcattt attttttctt taatttcgtt tgttgcgtcc tttaatacca tttttacttc
     9601 gcttgtgtca gcgcctatat gctgtgcaaa ttccagattc ctttttacaa catgatagtt
     9661 tggatcaaag agtttgtggg attctttata aatttcattt gaaaaaagct gataaaattc
     9721 tcttcctccg gtgagggtta cttttctttt aatatttaaa aacggcaaaa tagacgcact
     9781 tttaaataac tgctgggtat caagcacaac atcataatgt tctttgttta tttcatcaat
     9841 tatattttta aattctttga tattttcaaa agaaagcaat cctcgttttt tccaagtctt
     9901 tttaggaatt acatagcaat ggtcaataag tgggttttct ttaataaaaa gctgtgcttt
     9961 gtcttctaca acccagccta ttttacaatc aggccaggtc ttttttattg cataagcaac
    10021 aggaagagtg tgtattgtat ccccgagtgc acttaatctt aagattaaaa ctttgtttat
    10081 ctgtttttcc atttttttat tatataaaaa atataagaac catacgaaag atttactctt
    10141 cttaatgttt tttagacttt ttggtggagt catgaaatac aagtatttat tattattaaa
    10201 aagttgaaaa tcgtctattt caaagacaga aaataagact atccccatac atcccgtaaa
    10261 tatacaaaca ggaaggctat tgtaataatg agcagtaaaa aagtcctaaa gctccgtcaa
    10321 gcaatactaa aatacaatac agaactgata aaattaaaag accatctgga atcctccgag
    10381 gaggcaaatc ttaagtacaa ccaaattgtc ataaaaaagg ctatctgcaa aaaagaactt
    10441 gacgaagcaa gaatgccgtt agtacaaaaa ttcttcaaaa aatttgctca caatacagat
    10501 aaagacaaaa aacttatctg tgattatttt aaatcttaat tatttgccaa agctaagcag
    10561 tctgaaagat ttctttttat tttcagattc tctgtccggt aattcataac attttaggca
    10621 tcttgcttca tatgtttcat ctccgcctat cataataaga ggcgatgatt tgtcagcagg
    10681 aaaaccgtta attaatcttt gtgttcttgt tgcatggtca gagccgcatt tcatgcaaac
    10741 agctgtcagt ttgtctactc tgtcagcaat gcataacaac tcgggcatag aaccgaatgg
    10801 ttcaccttta aagtcaaggt caagaccaga tgctatgact ctttttccgt gttcagcgag
    10861 ttttcttaca acagagacaa tctctgaatc aaaaaactgt atttcatcaa tagcaacaac
    10921 ttcatcgtca gcgcaaatgt ggcttaatat gtctcttgca ttttttacgg tgattgcatc
    10981 cagccataaa ccatttcttg attcaatata atcacccttt gctcttgtat caacctcagg
    11041 tgatattacc tttacttttt tttgtgcaat gatacatctt tttactctgc gcagtaattc
    11101 ttctgttttt ccgcagctca ttggccctgt gattatctca aaagtgtatc ccataagaaa
    11161 attcctcaaa tcccctgatt attatttata tccacatgaa aacaaagttt ttcatgacaa
    11221 tcttccttta attatatgat aaatctaaaa atattttaat aattagccag gaattttaca
    11281 gcgtgttaac atgtcatcat ggcaaaaata ttgttggtat cagatgacga aaaacaaaat
    11341 aagctcatca cgcaaatttt gagcaaaacg ccggctgctg ttataacgtc cgttgacgaa
    11401 tcagctgtat taaactatgt ggaaaaagct cttgtctccc ttgttttaat agatgaaagc
    11461 ataaaaacat tagatgcctt gattctttgc aaaaaaatgc aggcatatac cctgaaagaa
    11521 aatattgcgg ttatttcact tgttgattcc aaaaccgaaa atattgaact gctcaaaata
    11581 acaaatgctt gtgtgacaaa acctgttaat gacaaaatcc tttctgcatg cgttgcatca
    11641 aatttgaaac ttaaaaaagc tgttgataca ctctctacaa acaacagcga gcttgcaaag
    11701 agcctttatc agcttgatgt tttgtataac acctcaacac agcttgcagg atctttggat
    11761 aaacaaaaac ttataaacat tatgatagac gggctggaaa agagtttgag cttttctctg
    11821 tcttctacac ttgtttttaa tgacgaacat catattgatt taattataaa ctctctttac
    11881 gcaatatcac cgcgtctgga acattcctta aaactaaggg caattttaag ttacagggcg
    11941 ctttttgaca agaagagaat accctatgac ctcaatgtca acgatattac tgtaataaag
    12001 aatattaaac acccccttga ggaatatgac ctcaatattt taaagtttga caaccttttt
    12061 gctccgatta atgtgggtga aaaattcttc gggctcatag aagtattcag ggagtctgac
    12121 ttttcccaag aggatacaac ctgtttccaa actcttgcaa ggcaggtttc tttaccgctg
    12181 gaaaatgctg ctttgtatga agaaatcaag aaaaccaata caaagctcga aaaactggaa
    12241 cgattaaaat ccgagtttat ctcaattgtg tctcatgaat tgagaacacc tcttacagct
    12301 attaaaaact cgcttgaaat ctgcctcagt ggcaaggcag gcgatgtaag ctcaattatg
    12361 gacaaattcc tcaacatggc aaaaaggaat gtaacaagat tatccggcat tattaatgac
    12421 cttcttgatt tgtccaaggt agaagccggt aaaatggact tcaaatttga acgtacaagt
    12481 ataaatactc ctgtggagtt tataaaaaat acgtttgaaa atgttgcaaa agaaaaaaat
    12541 atagaccttg ttcttgaaaa agatgataat attgcctcaa cttatattga taaccagaga
    12601 atagaacagg tcgtgtcaaa ccttgtttca aatgcaatta aattcacaaa cgaaaacggc
    12661 agaattatcg taaaaacaga aaatataaaa cagtctgata ttgataaaac aaaactcatc
    12721 ggtgttgaaa atcctgtttt ttatgacgaa tatattaagg tttctgtatc tgacagcgga
    12781 ataggtattg ctccggaaga cctcaaaaag gtctttgacc agttccagca gattgaaaac
    12841 tcactaaacc gtaaaaacgg aggcacagga ctcgggcttc ctattgcaaa acagcttatt
    12901 gaggctcaca aaggctttat ctgggtagaa agtgaagtta acagaggaac aacttttgct
    12961 tttgttatac ctgttttgag tgaaaaggaa aaatttatac ttgatcttga taaagaaatt
    13021 tcaaaggcta aaagctgtga gcaaaatgtt ttgcttgtgg ctcttaatga accggctgag
    13081 tgcaaaaact cttttataga tgcagtttta caggaaaaaa ttactattat cagaaaaaca
    13141 tcaaatacaa aagaagttta ctttgaagaa aacggcaaaa aatgccttgt gtttatgata
    13201 cccgaggcgg ataagtttgc ccaaagcttt atcgaaaaga aaatcgagag cactctttgc
    13261 agtgtgaatg cggaaacaaa taaagaaaaa tatgatatat tgtattcatc ggtgctttat
    13321 cccgataacg gagaagatgc gcatgaactg atggagacag caaaagattt gttatcaaaa
    13381 caaaagactg aaatggtgga ggcataatat atgacagata cgggcaagaa gattcttatt
    13441 gtggatgatg agcaggatat tgtagaaacc cttaagttta tgcttgaggc tcaagggtac
    13501 gaatgtttct gtgcttatga cggtgaggcc ggacttaata tggcaaaaga aattatcccc
    13561 gatttgatga tacttgatgt tatgatgcct aaaattaacg gatacaaaat cagtcgtctt
    13621 ttaaaatacg acaataaata taaagacatc ccgattataa tggtaacagc ccgttctcag
    13681 gaagacgaca aaatcatagg ccaggaaaca ggggttaatg agtatattac aaaacctttt
    13741 gagcttgatg aagttattgc aaaagtgaaa gagtacctat aatggagttt gtaagaaata
    13801 aaacccttga aaaactgaaa tatgaccttg tcagagataa cctcataaaa tatgaggacc
    13861 ttgaaactgc cgagcaggta tcagaagccc agcatgttaa tatcggtcag gttttaatct
    13921 cttcgggcat aattgcagag gatactcttt taaagtttct tgaaagcaag ctgcatattc
    13981 cgtatgtaaa ccttgatgat tattctcttg ataaaaaatg tttaaattat ataaacctta
    14041 ataatgcaca gaaatacaaa gttatacctc tgtttgaaat agagggtatt cttactgttg
    14101 caatgtctga ccctttggat ttgtttgcaa tagacaaaat agtagaagac gcaaagtgtg
    14161 aaatcgagcc tgttatatct tctgaaaatg caattttgaa aaaaattgaa gaatactaca
    14221 caagcgcaag ctctgtgggc caaattttta ttgatgaaaa cagaccaaaa tacgattggc
    14281 gtgaggtttt gaacaatgaa gagctgactt ccagtctttc cgatgaacat atacaaaaac
    14341 ttatacgttc aattttaaaa caggctatct ccgatgatat ccatgaactg ttttttgaac
    14401 acgtgccaaa cggtttaagc gttacattca gacagaattc acaaaatgtt tcaacaggcg
    14461 acataccgac tatactggtt gctcctttta ttgcaaggct aaagactctg tctaaccttg
    14521 accccactgt atcagagctt ccgcagcttg gaaaattgag ttttaaagtt gatgacatgg
    14581 ctcttattgc aagtatatct gctttcccta caattcatgg agagcgtatt tcgattaaaa
    14641 tttataagcc gcctaaaaag cttgaagaca ttgcccttga tatgaaaaaa attaatataa
    14701 ttagaaatgc agcgcaaaaa cagggtattt tgcttgtgtg cggttcagga ttaagcggca
    14761 aaactcacat gatttattct atcctgtctg atattgcgga tgacacaaaa aatgtaatga
    14821 caatagaatc tattacaaaa tataatcttg aaaatgttaa ccagtgtgaa ttaaacgagc
    14881 acattggctt taaccttgat aaggcaatgc gttttataga gtttcaatca cctgatatat
    14941 tatattttga aggtataaat acaaaagaag ggcttgatta ctttacttca ctggtattta
    15001 aagataaaac actcataaca gagtttttgg cggaaaatat agctgacctt atgaaaaagc
    15061 tttccttgag cgaattttcg atgtttaaat ctttattaac atgtcttgtt tttcttcaca
    15121 gtaaagacag tatagaagtt tttgacaaac aggctctgga aaaatatttt gcatagcgaa
    15181 tgtaaaactt ttgtaaaatt atattaacaa ttcctggctt tcggtaaatt ctgtagattt
    15241 aaaatttttt ataagtatat aggaaaccga aggaaaaa
//
LOCUS       DABS01000162            8981 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_22013, whole genome shotgun sequence.
ACCESSION   DABS01000162 DABS01000000
VERSION     DABS01000162.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8981)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8981)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8981
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..301
                     /locus_tag="CPT85_07280"
     CDS             <1..301
                     /locus_tag="CPT85_07280"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21814.1"
                     /translation="FVGGKGQMPSLTGVMMEIDQTIIPNKLRIVADYVSRDESWGSFA
                     AGLKIRPEPTTSITTAVIIPNNDEDRVAFSVSLSKYVGKVFSEPVKKEQDRKDAL"
     gene            298..732
                     /locus_tag="CPT85_07285"
     CDS             298..732
                     /locus_tag="CPT85_07285"
                     /inference="COORDINATES: protein motif:HMM:PF13599.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="DAB21815.1"
                     /translation="MIIKKLFVSAFIVSLSCVTYSAMADSEGDFVFNMLTKDYQGAYL
                     EKRSFEGLNLEGYNFAKAKLDRTNFKNANLKNANFKGADIENATFEGANLEGANFENA
                     DLEETSLLNANIKNVNFKNTELEYAIWVDGKVCGAGSVGSCW"
     gene            complement(736..1173)
                     /locus_tag="CPT85_07290"
     CDS             complement(736..1173)
                     /locus_tag="CPT85_07290"
                     /inference="COORDINATES: protein motif:HMM:TIGR00051"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase superfamily protein"
                     /protein_id="DAB21816.1"
                     /translation="MIHNNIGAHMIHTDEIRVYYADTDAYGVVWHGAYLRWLEAGRIE
                     YSNKVLKLDLKQMQEDGCLLPVVELNIKYKISAKLDENLILETKIQELRPSAIVFNQT
                     LKNKDTGLVNIVATVTCVALNTNTNKMYRRLPQYITDTYNKLK"
     gene            complement(1163..2764)
                     /locus_tag="CPT85_07295"
     CDS             complement(1163..2764)
                     /locus_tag="CPT85_07295"
                     /inference="COORDINATES: protein motif:HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21817.1"
                     /translation="MFRILQHRNKSSKKEFKTNSSLQRAIEKCQIELANDPTNAQLHV
                     KLGDLYLEWHLDIHQARQYIDEAITEYQRALESYIDSAEIYFKIGMAFYYKNEIDRAI
                     NYFNLAVEKNPKNAQAYYMLACCHTKKAHFPDAMDFAQKAIKIRPFSSSRAHFLRYNL
                     YRVMSVKSFKISMLRQKEFLLSVLTLPFDKNALKSVSKVISYLQFMPMLIKGWIMVAR
                     NGIDEAVDLYREALEKAPGFILLYCLLGDIYRAMGRYEDAILEYKMAIILDSLNITAY
                     RSLCSVYEELGDLDSAVDAYQKLIEIQPNAAEYHSNLANILYLKGEAKEAISYYQNAI
                     TLNPRPEWTSVIAQTLGYVFQESEKNTDAAISAYQSAYLLTPTDIDIFINMGSAFYDK
                     QEYNNALTVYRRALELDPTNAKIHCNLGFLHWGKGDIDEAIKEYELSIKYDPTYDIAY
                     NNLGVIYLDDLGRVQNAIELFEKAIKYNPNYALAHYNLGRSVAIKGDKVEAAKLYQIA
                     MDLNNVTNELDPQEITDKIQGLFDS"
     gene            complement(2841..3455)
                     /locus_tag="CPT85_07300"
     CDS             complement(2841..3455)
                     /locus_tag="CPT85_07300"
                     /inference="COORDINATES: protein motif:HMM:PF07238.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="DAB21818.1"
                     /translation="MASSPIKRGQKVQVEVETGSRKTIIDCYILEPDSDRLTLSFPES
                     KNEFAPYLSEGTEIKAFLYSFTGIMIFDSIVFDSVFDGKLVIEFSEKHQVIQRRKYVR
                     MPYITDFFLERESGNIKTQTVDISGGGVRFLTDKLLASEQHFKAQLRLNNFEPMIKVE
                     GHILKKNFYKTNEYVMEFAQIEEKDREKIIQKCRMIEFEQIKNS"
     gene            complement(3457..4686)
                     /locus_tag="CPT85_07305"
     CDS             complement(3457..4686)
                     /locus_tag="CPT85_07305"
                     /inference="COORDINATES: protein motif:HMM:PF05193.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21819.1"
                     /translation="MNKIILDNTIPVVLKENKNTPRHAMCFYFKIDEPEKKAGLYTIL
                     NRLFLQGTKKRSAAQLAQELDENAIDCYSEMKQDFLRFKLQCLNEDFEKGLEILADII
                     KNSTLEEFDKEVIKLKGEIQAELDDPKSKALDGFYKNIYKNHPYGHTYTKILEDIDEL
                     TKSDVECAYKNLLENSSKIISIAGDFEKDNLEEMLKKHFSDLKNNPDAQSKIPVPQLK
                     ENSVVKIVKNDASQAQIIQGWHVPTIYSKDYASIMVMNTMLGSSGLSSRLFLELRDKK
                     GLAYVVRSSYEIYDKAALFNVYIATEPKNIKTCLEGFKVELDKIKNIPVTQEELENAK
                     NNLIGKRQFFTETNLQQSSLMAFYEDKGLGANFEEKLIELVKQVSVQDIQRVANECIK
                     DPFVLTILAPEEYLKEV"
     gene            complement(4702..6036)
                     /locus_tag="CPT85_07310"
     CDS             complement(4702..6036)
                     /locus_tag="CPT85_07310"
                     /inference="COORDINATES: protein motif:HMM:PF05193.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21820.1"
                     /translation="MENIIKKEIQYPYLTKPVEIYERQNGHKIVLAHKEGGLVNISSW
                     VKTGSINENDENNGISHFLEHLMFKGTHKHKAGYFDKTLESKGAIVNAATWKDYTFYY
                     VTLPQGPDGEYFKLAIELHADMMLDPVIPEEEIGVAFNLGDDSVPQKRERHVVIEEIR
                     MRQDQPWTKIYNSTNKNMYTNHPYKRDVIGFPQTIASIPRETILEYYRTHYTPNNITT
                     IVAGDFNHEEVLEKVCKEFDFKGRENYNNPKQVLDTPVTEEKYIELKGKINTGFSITG
                     WLGPVAREVKDNIGLEIINIVLGEGQSSRLYQNLIEQAKEPIFNVVATDYYSFKDGGN
                     FFVQANFKADKKEEALKLIKDEIQKILNKDMTQKEFEKAKKKLKVRFAESAETVSEIA
                     ETIGYYMTVCDDLDLAESYLNDLENYTLEEANKTAQKYLQLQNSVTTVLLPE"
     gene            complement(6120..7571)
                     /locus_tag="CPT85_07315"
     CDS             complement(6120..7571)
                     /locus_tag="CPT85_07315"
                     /inference="COORDINATES: protein motif:HMM:PF02386.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter"
                     /protein_id="DAB21821.1"
                     /translation="MRLTYIFTSLALVLRCIALVILAPAAVAVYYKDWHSIIPFVGAS
                     LLSFVLSFLFTKKSDTFESLNDIKKSEALCVVTLSWLSFSIIGMLPYIYFGLSPLNSL
                     FESVSGITTTGATILTSFDYPKAMFFWRSMSQWLGGMGIIVLFIAILPQFAVAGRQMF
                     FAEAPGPTEDKITPRIRHTASAVWTIYLLVTLMEIILLRLAGMPLFDAFCNSFSTLAG
                     GGLSPNPLSIMGYGSNLINWIMIFFMFIAGVNFALIYKVYLNKKPSLLFQDEEFRTYT
                     GIIFVFSLLIAGALYLNNTYNIFEAITSGFFQTTSIIITAGFASVDFQQWHLSAELLL
                     FCLFFIGACAGSAGGGMKVVRWLFLFKYLRRELAKILHPNAVYPIKINKTIVPVEVIQ
                     QIIAFIFFYFLIFGISAFFIAILENNTLLGVTGSITTLGNVGPAFGALGPMGSFDVLH
                     PFSKIICIFNMLIGRLELIPFLAMLHPDFWNIK"
     gene            complement(7571..8902)
                     /locus_tag="CPT85_07320"
     CDS             complement(7571..8902)
                     /locus_tag="CPT85_07320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015725417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="DAB21822.1"
                     /translation="MKIVVFGASEIGYLIATEFFEDHDITIIDSEENRTDALNKLDIS
                     FIAGNGSNINTLKAANIEDADIFIACTNFDEANIVSCLTVSRLSRAKTVCFVSKPEYI
                     ESLKLVKNTQYEMIDFVIWPEELLTQEIFRIITVPEAVDVENFASGKARLLEYRIKED
                     SLILNKKIKDCRFTPETLVVAITRDETLFIPDGETDFKLNDKVIFMGSSTSLDILARE
                     IFQSKTKVKTAAIIGGGSVGLMLAQNLEKINIKTKIIEKDYKRCEYLTEVLKNTLVLY
                     GDGTNMELLQQEDFGESDVVISVTNNDEKNLLCSLLTKQMGAKKVITRVSKSANISLF
                     EKVGIDVAISPKEASINEIRNNLIETDVEILATVERGQGRIIEAIIPQDFKETALMDL
                     KLPQRAIIAIIQRGHSVIIPKGLTKLLAGDSLLIFTREEDSQKIIDFFRGQ"
BASE COUNT         2582 a         1638 c         1539 g         3222 t
ORIGIN      
        1 ctttgttggt ggaaaaggcc aaatgccctc tttaaccggt gtgatgatgg agattgacca
       61 gacaattatc cctaacaaac tgcgtattgt tgcagattat gtatcaagag atgaatcctg
      121 gggttctttt gcagcaggcc tcaaaatcag gccagagcct acaacttcta tcactacagc
      181 agttattata ccaaataacg atgaagacag agttgcattt tctgtatctt tgtctaaata
      241 tgtaggtaaa gtattttccg aaccggttaa aaaagaacag gacagaaagg atgctttatg
      301 attatcaaaa aattatttgt ttctgctttt attgtctctt tatcttgtgt tacatacagt
      361 gcaatggctg attctgaagg tgattttgta tttaatatgc tcacaaaaga ttatcagggt
      421 gcctatcttg aaaaaagatc ttttgaaggt ttgaatcttg aaggatacaa ctttgccaaa
      481 gcaaaattgg acagaacaaa ctttaaaaat gctaatctta aaaatgctaa ttttaaaggc
      541 gctgatatag aaaatgcaac ttttgaaggt gctaatctgg aaggtgccaa ttttgaaaat
      601 gcagacttgg aagaaacttc tcttttaaat gcaaacataa aaaatgttaa ttttaaaaac
      661 acagagctag aatacgcaat atgggtggat ggtaaagttt gcggtgcagg ttctgtaggt
      721 tcttgctggt aaaatctatt ttaatttgtt gtatgtgtct gtaatgtatt gtggcaagcg
      781 tctgtacatt ttatttgtgt ttgtattaag agcaacacat gtgactgttg ctacaatatt
      841 aaccaatcct gtatctttat tttttaaagt ctggttaaac acaatagcac taggtcttag
      901 ctcttgtatt tttgtttcca gaataagatt ttcatccaat tttgctgata ttttgtattt
      961 tatgttgagt tctacaacag gcaacaggca gccgtcttct tgcatttgtt ttaaatcaag
     1021 ttttaggact ttgtttgaat attcaattct tccggcttca agccatctta aataagctcc
     1081 atgccagaca acaccgtatg catcagtgtc tgcgtaataa actctaattt cgtcagtatg
     1141 tatcatatgc gccccgatat tgttatgaat caaaaagccc ttgaatttta tcagtaattt
     1201 cttgagggtc taattcatta gttacgttgt tcaagtccat tgctatttga taaagctttg
     1261 ctgcttctac tttgtctccc ttaatagcaa ctgaacggcc caaattgtaa tgcgccagtg
     1321 cgtaattagg attgtatttt atagcttttt caaaaagttc tattgcattt tgtactctac
     1381 ccaaatcatc aagataaatt acaccaagat tgttgtatgc aatatcatat gtaggatcgt
     1441 attttataga caattcgtat tcttttattg cttcatctat atcacctttg ccccagtgta
     1501 aaaagcctaa gttacagtga atttttgcat ttgttggatc aagctcaagt gctcttctgt
     1561 atacagttag cgcgttgttg tattcctgct tgtcataaaa cgcactgccc atattaatga
     1621 aaatatcaat atctgtaggt gttaacagat atgcactctg gtatgcactg attgcagcat
     1681 ctgtattttt ttcagactct tgaaatacat aaccgagtgt ctgtgcaata acacttgtcc
     1741 actccggtct ggggttgaga gtgattgcgt tttgataata tgaaattgct tcttttgctt
     1801 ctcctttcag ataaaggata ttagcaaggt tgctatggta ttctgcagca ttaggctgga
     1861 tttcaattaa tttttggtat gcgtctacag cactgtccag gtctccaagt tcttcatata
     1921 cagaacacaa tgaacggtat gctgtgatat ttaggctatc gagtataatt gccattttat
     1981 attccaaaat agcatcttca tatcttccca ttgctctgta tatgtcgccc agcaggcaat
     2041 ataggaggat aaaacccggt gctttttcaa gagcttctct gtataaatct actgcttcat
     2101 caattccgtt tctagcaacc attatccagc cttttatcaa cataggcata aattgcagat
     2161 atgaaataac ttttgaaaca ctttttaatg catttttgtc aaatggcaga gtcaaaaccg
     2221 aaagcaaaaa ttctttttgt cttagcatcg agattttaaa actcttaact gacataacgc
     2281 gataaaggtt gtaacgtaaa aaatgagccc ttgatgatga aaaaggtctt atttttattg
     2341 ctttttgtgc aaaatccatt gcatcaggga aatgagcctt ttttgtgtgg cagcatgcca
     2401 gcatgtagta tgcctgggca tttttaggat ttttttctac agcaagatta aaatagttta
     2461 tggctctgtc aatttcgttt ttgtaataaa acgccatacc tattttgaag tatatttcag
     2521 cagaatcaat ataagactcc aaagcccttt gatattctgt tattgcctca tcgatatatt
     2581 gacgggcctg atgtatatca aggtgccatt caaggtataa gtctccgagt ttaacatgca
     2641 gttgtgcatt tgtagggtca ttagcaagct ctatctggca tttttcaatg gctctttgca
     2701 aactactgtt tgttttaaac tctttttttg atgatttatt tctatgctgt aaaattctaa
     2761 acatgtttat ttatatactt cactctattt taatattaaa atacatatcg tttttttgca
     2821 aacgcgaaat aataacgtta tcagctgttt tttatttgct caaattcaat cattctgcat
     2881 ttttgaataa ttttttctct gtctttttcc tctatttgcg caaactccat cacgtattca
     2941 tttgttttat aaaaattctt tttaagtatg tggccttcaa cctttatcat cggttcaaaa
     3001 ttattaagtc tcaattgcgc tttgaaatgt tgctccgagg caaggagttt gtctgttaaa
     3061 aacctgacgc ctccgcctga aatatcaaca gtttgtgttt tgatatttcc tgattctctt
     3121 tccagaaaaa agtctgtgat ataaggcatt cttacatact ttcttcgttg tattacctgg
     3181 tgtttttccg aaaactctat aaccagcttg ccgtcaaaaa cagagtcaaa aacaattgaa
     3241 tcaaaaatca tgatacctgt gaaactatac aaaaatgctt ttatttccgt accttcactc
     3301 aaatatggcg caaattcgtt ttttgattca ggaaaagaga gcgtgagtct gtcagaatca
     3361 ggttctaaaa tatagcagtc tatgatagtt tttctgctgc ctgtttcaac ctcaacctgt
     3421 actttttgtc ctctttttat tggacttgat gccattttaa acctctttca aatattcttc
     3481 gggagcaagt attgtcaaga caaaaggatc tttaatacac tcgtttgcca ctctttgaat
     3541 atcttgcact gatacttgtt ttacaagctc aataagtttt tcttcaaagt ttgcacccag
     3601 ccctttgtct tcgtaaaatg ccataagact ggactgctgc agatttgttt ctgtaaaaaa
     3661 ctggcgtttt cctatcagat tattctttgc attttccaat tcttcctgtg ttacaggtat
     3721 atttttaatt ttatcaagct caactttaaa accttcaaga caagtcttta tgtttttggg
     3781 ctctgttgct atgtatacgt taaacaaagc tgctttgtca taaatttcat agctgcttct
     3841 aactacatat gcaagacctt ttttgtctct taattctaaa aatagtcttg aagaaagccc
     3901 gctggagcca agcatcgtat tcattaccat aatagaagcg taatctttac tgtaaatggt
     3961 tggtacgtgc catccttgta ttatttgtgc ctgtgaggca tcatttttaa caatttttac
     4021 aacagaattt tctttcaatt gagggacagg tatttttgat tgagcatcag ggttgttttt
     4081 taaatcgcta aagtgttttt ttagcatttc ttccaaatta tctttttcaa aatcacctgc
     4141 aatgcttata atttttgacg agttttccaa aagattttta tacgcgcatt ccacatccga
     4201 ctttgttaat tcatcaatgt cttcaagaat ttttgtataa gtatgtccgt aggggtggtt
     4261 tttgtatatg tttttgtaga acccgtcaag agctttggat tttgggtcat caagctctgc
     4321 ttgaatttca cctttgagtt ttattacttc tttatcaaat tcttctaatg tggaattttt
     4381 gataatatct gccaaaattt caagcccctt ttcaaaatct tcgttaaggc attgaagttt
     4441 aaaacgcaaa aaatcctgtt tcatttcgct gtagcagtca attgcgtttt cgtccagttc
     4501 ttgggccagc tgtgctgcag aacgtttttt tgtgccctgt aaaaaaagtc tgtttaagat
     4561 tgtgtatagc cctgcttttt tttcaggctc atctattttg aaataaaaac acattgcatg
     4621 acgcggtgta tttttgtttt ctttgagaac tacaggtatt gtgttatcca aaattatctt
     4681 attcatttta tatcctttat tttattcggg taaaagcact gttgttactg aattttgaag
     4741 ctgcagatat ttttgtgctg ttttattcgc ttcttcaaga gtataattct ccaaatcatt
     4801 taaatagctt tctgcaaggt caagatcatc acacactgtc atgtaataac cgatagtttc
     4861 tgctatttct gataccgttt cagcactttc agcaaatctc actttcagtt tcttttttgc
     4921 tttttcaaac tctttttgtg tcatatcttt gtttaagatt ttttgtatct cgtcttttat
     4981 cagtttcaag gcttcctctt ttttatccgc tttaaagttt gcctgtacaa agaaatttcc
     5041 accgtctttg aagctgtaat agtcagttgc cacaacgtta aatataggtt cttttgcctg
     5101 ttcaatcagg ttttgataca ggcgggaact ttgtccttct cccagcacta tatttataat
     5161 ttcaagcccg atattgtctt ttacttctct agcaaccggt cccagccagc ctgtgatcga
     5221 aaaaccggtg tttattttgc cttttagctc aatatatttt tcttctgtta ccggtgtgtc
     5281 cagaacttgc tttggattgt tgtagttttc tctgccttta aaatcaaact ctttacaaac
     5341 tttttccagc acttcttcat gattaaaatc acctgcaaca atagtagtta tattatttgg
     5401 tgtgtagtgt gttctgtaat attccagaat agtttctctc ggaattgatg caattgtttg
     5461 cgggaaacct ataacatccc ttttgtaggg gtggtttgta tacatatttt tgttagtaga
     5521 gttataaatt tttgtccagg gctggtcttg cctcattctg atttcttcta taacaacgtg
     5581 acgttccctt ttttgtggca cactgtcatc acccaggtta aatgcaacgc ctatttcttc
     5641 ttcagggata acagggtcga gcatcatgtc ggcatgaagc tcaatagcca gcttaaaata
     5701 ctctccatca ggcccttgcg gcaatgttac ataataaaat gtgtaatcct tccaggtagc
     5761 tgcatttact atagcgcctt ttgattcaag cgttttgtca aaatagccgg ccttgtgttt
     5821 gtgtgtacct ttaaacataa gatgttccaa aaagtgagat atgccgttgt tttcatcatt
     5881 ctcattgatg gaacctgttt taacccagct ggagatattt acaagcccgc cttctttatg
     5941 agcaagcaca attttgtggc cgttttgtct ttcgtatatt tccacgggtt ttgttaaata
     6001 agggtactgt atttcttttt ttataatatt ttccacctga ttacctctgt aattataatt
     6061 ctaccagact attgtatcag ataatcccgt gttttacacg tatatacggt gtagattagc
     6121 tatttaatat tccaaaaatc aggatgaagc attgccagaa aaggtataag ctctaacctg
     6181 ccgataagca tgttaaatat acatattatc tttgaaaagg gatgcaaaac atcaaaactg
     6241 cccattggac ccagtgcacc gaatgccgga ccgacgttgc ccagagtggt aatacttcct
     6301 gttacgccaa gcagagtatt attttccagt attgcaataa aaaatgcact tattccaaat
     6361 atgagaaagt agaagaatat aaacgcaatg atttgttgta taacttcaac agggacaatg
     6421 gttttgttta tttttatggg ataaactgcg ttgggatgga gtattttggc cagctctctt
     6481 ctcaaatatt taaaaagaaa cagccatctg acaactttca taccgccgcc tgcagaacct
     6541 gcacaagcac ctataaaaaa caggcagaat aacaacaatt cagcacttaa atgccattgt
     6601 tgaaaatcaa cagaggcgaa gcctgcggtt atgataatac ttgttgtttg aaaaaatcct
     6661 gaagttattg cttcaaaaat gttgtaagta ttatttaagt ataaagcacc ggcaataagc
     6721 aaagaaaaga caaaaataat tcctgtgtaa gttctaaatt cttcatcctg aaataataat
     6781 gagggttttt tgttcaaata aaccttgtaa attaaagcaa agtttacacc ggctataaac
     6841 ataaaaaata tcattatcca gttaataaga tttgagccgt aacccattat actcaaaggg
     6901 ttgggcgata agccaccgcc ggcaagtgtg gaaaacgaat tacaaaatgc atcaaacaat
     6961 ggcattccgg caagccttaa cagaataatt tccattaatg ttaccagaag gtaaatagtc
     7021 catacagcac tggcggtatg tctaattctg ggagtgattt tatcttctgt tggcccgggt
     7081 gcttcggcaa aaaacatttg cctgcctgct acggcaaatt gcggcaagat ggcaataaac
     7141 aatacgataa tacccatacc tccaagccat tggctcattg aacgccagaa aaacatagct
     7201 ttggggtagt caaaggaggt taaaattgtt gctcctgttg ttgttatgcc tgatacagac
     7261 tcaaaaagcg aatttagcgg actgagtcca aagtaaatat aaggaagcat tcctataatg
     7321 ctgaagctta accaggataa agttacaaca catagcgcct ctgatttttt aatatcgttt
     7381 aggctctcaa atgtgtctga cttttttgta aaaagaaaac tcaaaacaaa actgagcaaa
     7441 gaagctccaa caaaggggat aatcgagtgc cagtctttgt aataaacggc tactgcagcc
     7501 ggagcaagaa ttaccagtgc aatacacctt aaaacgagag ctagtgatgt aaagatgtag
     7561 gtgagacgca ttattgaccc ctaaaaaaat ctataatttt ttgtgaatct tcttctctgg
     7621 taaagataag caaagagtca cccgcaagaa gttttgtaag ccctttaggt attatcacgc
     7681 tgtgtcctct ttgaataata gcaataatag ctctttgcgg taattttaaa tccattaagg
     7741 cagtttcttt aaaatcttga ggaataatag cttcgataat acggccctga cctctttcta
     7801 ctgtggcaag tatttccaca tcagtttcta tcaaattatt tcttatttca tttatagaag
     7861 cttctttggg tgatattgca acatctatac caactttttc aaaaaggctt atgtttgcgg
     7921 atttagaaac cctggtgatt actttttttg cgcccatttg ttttgtaaga agcgagcaga
     7981 gaagattttt ttcatcatta tttgttacgc tgattacaac atcgctttcg ccaaagtctt
     8041 cctgctgcaa aagttccata tttgttccat caccatataa aacaagggtg ttcttcaaaa
     8101 cttctgtgag gtattcacat cttttataat ctttttcaat gatttttgtt tttatattta
     8161 ttttttcaag attttgcgca agcataagcc ctacgctgcc tccgccgatg attgcagctg
     8221 ttttgacctt tgttttgctc tggaaaattt ctctggcaag aatatccaaa gatgttgatg
     8281 aacccatgaa gataacttta tcgtttagtt taaaatctgt ttccccgtca ggtataaaga
     8341 gagtttcgtc tctggttatt gcaacaacaa gggtttctgg ggtaaatctg cagtctttga
     8401 tttttttgtt taaaatcaaa gaatcttctt ttattctata ttcaagaagt cttgctttac
     8461 cgctggcaaa gttttccaca tcaacagctt caggaacagt gataattctg aaaatttctt
     8521 gtgtaagcag ttcttccggc catataacaa aatcaatcat ctcatactgg gtatttttaa
     8581 ccagctttaa tgattcaata tattcgggtt tgcttacaaa acatacggtt tttgctctgc
     8641 tcaatctgct gacagtaagg caggagacaa tatttgcttc atcaaagttt gtacaggcaa
     8701 taaaaatatc agcgtcttct atatttgctg cttttaatgt attaatattt gagccgttgc
     8761 cggcaataaa gcttatatca agcttgttta gagcgtcggt tctgttttct tcgctgtcaa
     8821 tgatagttat atcatgatct tcaaagaatt ctgttgctat aagatagcct atttcacttg
     8881 cgccaaatac tactattttc ataattttat atcgttttaa cctgtatttt tgtttcatta
     8941 taatacataa ttttaattgg caaaatatat ttttgtttta c
//
LOCUS       DABS01000163           30544 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_8112, whole genome shotgun sequence.
ACCESSION   DABS01000163 DABS01000000
VERSION     DABS01000163.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 30544)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 30544)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30544
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..653
                     /locus_tag="CPT85_07325"
     CDS             <1..653
                     /locus_tag="CPT85_07325"
                     /inference="COORDINATES: protein motif:HMM:PF13561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21763.1"
                     /translation="LSNEGYQVYICARNEEILKNTAAQINASGYFVCDLINDNDVFEL
                     MQNNFDILINNAGDYVYSPVEKTADEDITRLIKLNVEVPYRLIKLAVPYMKKQHWGRI
                     VNIGSISGIVGEANASLYSMTKSAFTGFSKALALELAEDNITVNTINPGWVETELAQD
                     AVEKSDFSYEEEIEMIPQKRFICPDEIANLVKYMVSDEAKGMTGQSVSLCAGLSAG"
     gene            795..1286
                     /locus_tag="CPT85_07330"
     CDS             795..1286
                     /locus_tag="CPT85_07330"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21764.1"
                     /translation="MKISQTNFSMFKPMSKEERQEVHSNPFGINFKGNVLTSDVFESS
                     KAKETNSSTNPFAAFSSVTNKSKMVASAVVGGMNSFNEAFRSRINSIISFGRQVKDKI
                     ANSWEKAKNTEISLDFKGLAESISSKFDNSYSVNNLLKRPVDDLHTMFAVEHAAYKES
                     LKA"
     gene            1295..1657
                     /locus_tag="CPT85_07335"
     CDS             1295..1657
                     /locus_tag="CPT85_07335"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21765.1"
                     /translation="MKTNRIDNIIEALGRHEDPKSIQILEEIGTNSEIDEIREKTAHA
                     LIRKNSPEALKVVIASSGKGINDLSARVAMSAINEILGLNDKTEVLKVLEETMNSEEK
                     TEVKDTARSVKALITYSM"
     gene            complement(1708..2025)
                     /locus_tag="CPT85_07340"
     CDS             complement(1708..2025)
                     /locus_tag="CPT85_07340"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21766.1"
                     /translation="MKVNRLSLGLQEQLKEASNFNTARSETLFDKEKFGIPKDSQEEV
                     NFANLDVADLNISEDQIGNLLKSFETEVINVFSNNLPDLFGDNPLKQQDKQNPEQKPV
                     FTA"
     gene            complement(2126..2974)
                     /gene="ispE"
                     /locus_tag="CPT85_07345"
     CDS             complement(2126..2974)
                     /gene="ispE"
                     /locus_tag="CPT85_07345"
                     /inference="COORDINATES: protein motif:HMM:TIGR00154"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="DAB21767.1"
                     /translation="MSRIKIAAPAKINLTLEVLDKREDGFHNLKSIMQAISLYDYLTF
                     DVTDSDKTQISLCGNSDKIPYDNKNLVYKAIEKFLEKTAINNKKIEVYIEKNIPVEAG
                     LAGGSTDAAAAFFALNKLFNNPLSNEEIELLCASLGSDLNFCLHGGTALCTGRGEKTK
                     KIPTKQQYVTLIKPLGFGISAKEAYTKFPQMSDKTVPDNTEKLMNDFSTNFLFNSLEL
                     AVINDYQELLEIKAAIPKALMSGSGPTFFVLERYCPHVFDSKRFQVIEDLKFITDGVK
                     EIPHNC"
     gene            complement(2962..3468)
                     /locus_tag="CPT85_07350"
     CDS             complement(2962..3468)
                     /locus_tag="CPT85_07350"
                     /inference="COORDINATES: protein motif:HMM:PF00398.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21768.1"
                     /translation="MTSPILAHLLGEIDDLNNDNRNRISEIVLMVQWEVAQRLVADEN
                     APSKQYGLLSILTQFNADVELIQKVGRKSFYPAPKVDSALVKITINNGPRVKVEDYKF
                     LRKVVKACFATRRKNLKNSLMNAGFNKDAVAKTLETLQWGENVRGEILSIEKLAQLSE
                     ELKKQCLA"
     gene            complement(3429..4196)
                     /locus_tag="CPT85_07355"
     CDS             complement(3429..4196)
                     /locus_tag="CPT85_07355"
                     /inference="COORDINATES: protein motif:HMM:PF00398.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21769.1"
                     /translation="MFSSISTTSIESRLSKSLSQSLTILPVPNPIKRIFFISXRVNKI
                     RNSKIIDIGQIAFVELRIYKSCLISIFVVQKASYFVFYHFYVVKIRLLFIQDSVIERF
                     IIDYFKQFLFWFMDCKVFRYYYHVFYCIIQLMSDYFLRAKLFKTKKRLGQNFLVDEGV
                     IDRIVEEVNPDDTVLEIGPGAGFVTENIVNKAKKVYAVEIDEDAIEALQHIKTEKFKL
                     IHNDILKTQLKDLEDTTFKVIXRITSQAPFLRICSGK"
     assembly_gap    3477..3478
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4012..4698
                     /locus_tag="CPT85_07360"
     CDS             4012..4698
                     /locus_tag="CPT85_07360"
                     /inference="COORDINATES: protein motif:HMM:PF01564.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21770.1"
                     /translation="MRSSTKAICPISIILLFRILLTLXDIKNILLIGFGTGKIVNDWE
                     RLFDNLDSIDVVDIEENIFDIAADYFEFKKSDSINFFLQDGLVFLRENNKKYDLIVTD
                     VASDDGIDDRFLSDDYFKLIKKSLAPNGLFVSNLCSSADLTCKENTFFHSILDTYHSH
                     FKQVSIFKGNESDRVYYKAFFDIDERVIDITNVILISSKQQFSVGKDYEKIKATGLDI
                     VPYVNDLQSF"
     assembly_gap    4080..4081
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4684..5646)
                     /locus_tag="CPT85_07365"
     CDS             complement(4684..5646)
                     /locus_tag="CPT85_07365"
                     /inference="COORDINATES: protein motif:HMM:PF01569.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21771.1"
                     /translation="MFGTMDLQIQYLLLLQHFREVTHGVFDGFFMGATWLGEIIIPLT
                     FLSIIYWGINKKAGTFLFFNFGLTLYVNVFLKMTACIKRPWLIDSRVCPLEKALPAAD
                     GYSFPSGHTAGAMSCWGAAAYWWWNNKIVRYTMITFVLLVAFSRNYVGVHTPQDVIVS
                     ILIGICLMFGIDRLLKWIDAKDGRDLIFYSVLLVMTALLCIYLHLKCCMQLETYDSLK
                     DLVNPLEMKHGVYGKIGFLLGIFTGCLLEKRFVKFEITKGINTKKIISLLSGIIVLYV
                     LMMVLNKVFILFMAKHIAAAIIAFLTAFYITFLYPCILKTLKRL"
     gene            complement(5650..6757)
                     /locus_tag="CPT85_07370"
     CDS             complement(join(5650..6684,6686..6757))
                     /locus_tag="CPT85_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009543738.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="DAB21772.1"
                     /translation="MIDIEQKQKLEELALKINKAKECLDLAQVEAKEKELDSKLQSED
                     IWQDPQSAAKLSQELTECKNTLEKTSNWDKSIEDCNVLIELYNETEDESLWEELQNTL
                     DNLEKEMNEWEVEMTLSGEYDTYDAILTVNAGAGGTDAQDWAQMLLRMYTRWAESKNW
                     KVELLDKSDGEEAGIKSATIKLTGKYAFGLAKAERGVHRLVRISPFNANGKRQTSFAS
                     LEVSPVIEDFEKAIHIPPEDLEVDTMRSGGAGGQNVNKVETAVRILHKPTGIVVKCQQ
                     QRSQLQNKETAMQMLASKLLAIKQAEHDKKLAELKGENFDINFGSQIRSYVFHPYKMV
                     KDHRTGYEVGNVDSVMDGDIDGFIEAYLKQNINN"
     gene            complement(6782..7480)
                     /locus_tag="CPT85_07375"
     CDS             complement(6782..7480)
                     /locus_tag="CPT85_07375"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21773.1"
                     /translation="MKSIIQEDVMFLDGFSNIVKDKLDKKYGQGGYILIGIGSSPSCM
                     LEVIKEKGVETINMPFSKDVLNNSGCWVKNSSKQIDWAKYLKNFSLSVEDIEKYKKDN
                     KKVVILDYEGTGRTKELLEYKLKYDAKLQPTDYEFEDLGRLCWDADLYQTELFIENYL
                     TQRKEKLYSTCQNAGNTTDFYENIQDYEKEYKWHPLTKLFFFAHYDQKPEMAEKFNNW
                     MQEKITPPREYFLR"
     gene            complement(7503..8333)
                     /locus_tag="CPT85_07380"
     CDS             complement(7503..8333)
                     /locus_tag="CPT85_07380"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21774.1"
                     /translation="MNISFKAISQNVISALNTEVTGQLDPETNEQLPDVKYRELFKYE
                     ADVIKALKEKAKNNNDYDIFVTQPYKDKRFTNRNCVNKYGDCLSIVDRRTKETVKNIS
                     DAISTKLTPAQMINNLKFAVMTAEKLSQDSQNGLWNKICNHFKKPVLKELNQDSRNKI
                     FNNTIYQYEAKDSKLLEKIQAPDKNILDTNGLEINCDEKDINNYKKYHSQFENQKCHH
                     NIIQRSIGTPDEKIELENFLKTSAPEMEAAKSFTRDDYNKLSNKEKEQLRXRICKYQV
                     "
     assembly_gap    7527..7528
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8480..9124
                     /locus_tag="CPT85_07385"
                     /pseudo
     CDS             8480..9124
                     /locus_tag="CPT85_07385"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    8773..8789
                     /estimated_length=17
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(9169..10743)
                     /locus_tag="CPT85_07390"
     CDS             complement(9169..10743)
                     /locus_tag="CPT85_07390"
                     /inference="COORDINATES: protein motif:HMM:PRK12267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="DAB21775.1"
                     /translation="MTKFYLTTAIDYVNGAPHIGHAYEKIQTDVIARHFRQRIDDVYF
                     LTGTDEHGIKIQKTAASMGITPKELCDQNADKFKECWAGLDISYNKLIRTTDEEHEKI
                     VQKIFKKLQDNGDIYKHSYTGLYCSGCESFLNPRDLTEDGLCPDHLKKPEEVKEENYF
                     FKLSKYKDRIIEHIKKNPDFIQPEFRANEVLNQLEHIEDISVSRSKESVSWGIPVLGD
                     DSQIIYVWIDALSNYITALGYDPETPSDMFKTYWPADVQVIGKDILKFHAIYWPAFLM
                     ALDIPLPKTILAHGWITIDQTKMSKSIGNVIAPKDVMETFELSHPDAFRYFMMVTAPT
                     GRDGNYSDLDFKERVNADLANNIGNLLNRTLNMQVKYFDGEIKQEFITDSDNEIAKEA
                     LKTVQLVKNRFDKYEVAEAAQEIVNFSNTVNKYVNDTAPWSLAKEGKMEECAKVLYNV
                     LESMRFIAALLAPYTPNISQDVYEQLNRSEKAVEVKLDELKWGEIPVGKITEKEKIKP
                     VFLRLDSEIAGAAKKG"
     gene            10818..11519
                     /locus_tag="CPT85_07395"
     CDS             10818..11519
                     /locus_tag="CPT85_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018449959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="DAB21776.1"
                     /translation="MSERFNNRKNDELREISFIKDYTKHALSSVLVQFGDTKVIVTAS
                     VDEKAPKWMEKDDPRGWVTAEYSLLPTSTHTRCQRERSKISGRTQEIQRLIGRSLRSC
                     VDLEKMTGLTLTIDADVIQADGGTRCASICGGYLVLEDAVNKLMAQGKLAQNPILEPI
                     AAVSIGLIDGEVKLDLDYSEDSHAQVDSNVVMTKSGKIIEFQTTAEGNPFTKQELYQI
                     LETAENAIQKIIGMY"
     gene            complement(11666..12247)
                     /locus_tag="CPT85_07400"
     CDS             complement(11666..12247)
                     /locus_tag="CPT85_07400"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21777.1"
                     /translation="MKRLNIKKAFTLAEILVVLTIIGVISAMTIPSLNQNVKKQELAT
                     SLQKAHSTLTQGVSKVKAEIGPVGLGMAWLNAEKFWPEFTKNLNTIKICGSGQAGCFT
                     PGMIKGLNGQNYQNLEQLGFSAILADGMAIQYVNVGCGQTENISLDDIGSSFGKFVVD
                     VNGHRPXWRRCIPILPCKRQRHSTGRSFRFCSR"
     assembly_gap    11747..11748
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(12244..13623)
                     /gene="bioA"
                     /locus_tag="CPT85_07405"
     CDS             complement(12244..13623)
                     /gene="bioA"
                     /locus_tag="CPT85_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017895907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="DAB21778.1"
                     /translation="MRTEKDNWIEKDLKYVWHPDTQMKQYEGNNYKPTLIEHGEGIYV
                     YDADGNKYIDAVASWWVNTLGHSVPRLNKVLYEQASKIEHILLADFTHKPAIELAERL
                     VKLAGEPFSKVFYSDDGSTAVEVAIKMAYQYWYQKGQPQKKYFVSMTDSYHGDTLGSV
                     SVGGIDIYKEVFNPLVFETLKVNAPYCYRCPKGLNKHDCNIDCLKDVVKLFKEHHNEI
                     AAIIVEPLVQGAAGMRMYPAEYLNRLRILCDEYDILLIDDEVAMAFGRTGKYFAFEHA
                     GIKPDIFCVAKGITAGYIPLAATVTTNKIYDAFYDDFSKLKTFYHGHSFTGNPIACAV
                     ANETLKIMEEAKIIENLPFKAEVFRQAMQKFKKLAHVGDIRHIGMIGAVELVKDKDTK
                     EPYEFNQRIGHKVFLEAMKRGAILRPIGNVIYFMPPFIITEEEIEKLTQIAYNSIKSV
                     TQNEETEGL"
     gene            complement(13625..14728)
                     /locus_tag="CPT85_07410"
     CDS             complement(13625..14728)
                     /locus_tag="CPT85_07410"
                     /inference="COORDINATES: protein motif:HMM:PF02073.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="DAB21779.1"
                     /translation="MNTLWEKYAGVLVDYSTKVQKGDLVVIRATSYEAQPLVKEIYKQ
                     VLLKGANPVVKTAMDGLAETFIKYADDEQLGYIDPMTEIEYEKADVLISIGAPLNTKS
                     MAKADSKKMAKRSAATRELSNKMLKRAAEGSLRWVIADFPTNALAQEANMSLDEYTEF
                     LIKACYLHLDNPIEKWKEIDKEQQRLADYLNKTTKLHIIGEETDITFDTTGRKWLNCS
                     GQCNFPDGEIYTSPVEDSANGTIYFDFPQIYRGNEAQKVRVRLENGKVVEASAEKGEE
                     FFLNMINMDEGAKFVGEIAIGTNNMVQDITGNILFDEKIGGAIHMALGASYPEAGGKN
                     VSGLHWDLIKNMKNGSEIYADDVLIYKDGKFVI"
     gene            complement(14799..16106)
                     /locus_tag="CPT85_07415"
     CDS             complement(14799..16106)
                     /locus_tag="CPT85_07415"
                     /inference="COORDINATES: protein motif:HMM:PF02386.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkH"
                     /protein_id="DAB21780.1"
                     /translation="MKSMKRTKLKDKEVNPFKTILFGFLGYVIIGVALISLPFAQKIP
                     VGFVDNLFNVVSAMSTTGLTTGSLSDMYTPFGKIILLGLIQLGAIGYMTLTSFLILST
                     SKKISTHRVKILSAEFSMPENFDLKHFISNIIIYTIIVEFIGTVLLCIEFSKLGLQKP
                     LWSAIFHCVSAFSTAGFSIYADGLCRFQNDVSVNLIIAFLCYAGAIGFIVPMDIYRRL
                     TNKSKEITFTTKIILFITVMITLTGSVIYIGSSGADALSAFFQVMSASTTAGFNTVDV
                     SKLPDAALLVLIFAMIIGASPSGTGGGIKTTSVTAILGIITSVVRGHPEKITFLKRVI
                     PANRVMTAAAAATSYMLILFISTLLMCIVDNHSFMELFFETTSALGTVGLSLGITPEL
                     SDIGKIILSITMFLGRIGTLTLGIAFFRVKDNNIVRPQTDLAV"
     gene            complement(16103..16792)
                     /locus_tag="CPT85_07420"
     CDS             complement(16103..16792)
                     /locus_tag="CPT85_07420"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21781.1"
                     /translation="MKINEIKNNNPNNKIKHSTKIAAMTGSAIGVTTAVTLISRGHGV
                     KIPSTLKHPNGLVNILKNIELKEKDVIAIASSSIAGGLAGGLITDKKNAKAKVKEGIV
                     QLIGNYIVPTIAVGGGIKLNKALNKKYNFPPITRPIQFLFGMTSLIAGVVAGNKISRE
                     MNKQMFKEDHYRKLTWKDWAVQFDNVCLVTSISNAGTQLAKMASRFIPFAHLAPGYQV
                     GVKQADLNINA"
     gene            16958..17410
                     /locus_tag="CPT85_07425"
     CDS             16958..17410
                     /locus_tag="CPT85_07425"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21782.1"
                     /translation="MPEEKIKEHILVCLSSSPSNPKVIKTAAKMANVFDADFTALYIE
                     MTGTKKLSSENKKRLESNTALARAQGAKVVTLNGDDIAYQVAQYAKTGKVTKIVIGRS
                     GYRANSFFAPPNFVDKLIQQTPEIEIYVIPDXXSSGCISGPETQQKNI"
     assembly_gap    17359..17360
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            17460..18800
                     /locus_tag="CPT85_07430"
     CDS             17460..18800
                     /locus_tag="CPT85_07430"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02518.24,HMM:PF13493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21783.1"
                     /translation="MLTTSVCLYFQKLNINESNMIMIYLLGVLITAYITESKLYSIIS
                     SVLAVLSFNYFFTRPYMTVVSMDSGYTFTFFIMFFVALFVSSITKKIKEQAKQSYLKA
                     YSTQIMLDMSQKLQQAKNVEEIDEITIEQIKKLLDCDVLLFEPNKEPVSTVYECFPIR
                     NTDTVFLNAAIPAKRYKSATEFEKNLFSAMLRESALAYEKETITQTKNELLLKHKQEE
                     LRSTLLRAISHDLRTPLTGISGNADILLNNADVISGEKKHQIYSDIYDDSIWLLNLVE
                     NLLSVTRFDKNEINIKKESEFISDVIQEAVSHIGRRKNNYNIKIEITDESLSAKVDAR
                     LISQVVFNLVDNAMKYSPVNTTITIGAYAEGKDIKVFVSDQGNGISDEDKKSIFDMFY
                     TVNNAVSSDSRRGLGLGLALCKAVVEAHGGTICVTDNKPEGTIFEFSLEGDFYE"
     gene            18793..19476
                     /locus_tag="CPT85_07435"
     CDS             18793..19476
                     /locus_tag="CPT85_07435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005358038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="DAB21784.1"
                     /translation="MNKGNILVIEDDKAIQNLIATTLEISNYSFQTASNYADGILKFT
                     SYNPDVVILDLGLPDKDGIEIIKKVRTFSTVPIIVVSARTDNDDKINALDEGADDYLT
                     KPFNTQELLARIRVAIRHKTSAPGNTSADIFTNGSLKIDYAKGCVYVDEQEIHLTAIE
                     YKLLCLLAKNIGKVLTHNHIKKEIWLDENGCDSQLSLRVFVTNLRKKLKSPDYIKTHI
                     GIGYRMVNV"
     gene            complement(19481..20524)
                     /locus_tag="CPT85_07440"
     CDS             complement(19481..20524)
                     /locus_tag="CPT85_07440"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21785.1"
                     /translation="MIVNNNILVSSYKNNTPLKNTNHYNSNSSIINDSFVKTNKKVVT
                     FSGKINFFKQIILKIFPEKIKQPAAEITNQVKKQTKKAAQKTHILPFNGRERMRRLGV
                     KEENITKVLKAANGNKQHFYNMARLYKEGFHEDYISEIFVACKXGTGKVSNCLYNIAR
                     VLKEKEIPQQHIADIIKTFKVNRNFDQEAFQRFQKLKFQAYNADKQPKTAFSQKSSSE
                     IDNFFYGNMKNILELKEIIGEKNLLKLYNLDAEYIESITERITNLTEALKGRKKMVNL
                     LKQKMNPLNEALDINYGLVEEKAYSPQAQTIFQDRIAALLELLDYSDTIVKEKNSHNY
                     ELGQMMNILNKLP"
     assembly_gap    20088..20089
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(20594..21112)
                     /locus_tag="CPT85_07445"
     CDS             complement(20594..21112)
                     /locus_tag="CPT85_07445"
                     /inference="COORDINATES: protein motif:HMM:PF13720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21786.1"
                     /translation="MNRAATEGDATIVGDRCMLMTSTHVAHNCVLEDEVIMANLATLG
                     GHCHVGKGAFLGGMSVFHQNVRIGEMCIISGFSAARMDCLPYVKGEGRPPIPHGINSI
                     GLKRRGIDADVRAHLKEALKILKSGEYTITKACDVIEQNVEQDEYVKKFVQFIRDSKR
                     GITLRKAENTLC"
     gene            complement(21141..21368)
                     /locus_tag="CPT85_07450"
     CDS             complement(21141..21368)
                     /locus_tag="CPT85_07450"
                     /inference="COORDINATES: protein motif:HMM:PF00132.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21787.1"
                     /translation="MIDNRAIIADDAQIGKNVTIGANAIIGNGVKIGDNVTIMPNAYL
                     EYCEIGDGTLISPFASIGTAPQDLGYKIHYW"
     gene            complement(21378..21833)
                     /gene="fabZ"
                     /locus_tag="CPT85_07455"
     CDS             complement(21378..21833)
                     /gene="fabZ"
                     /locus_tag="CPT85_07455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015218596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabZ"
                     /protein_id="DAB21788.1"
                     /translation="MTEQNTTEQTLQFDVMQIMEMIPHRYPFLLVDRITECVPGKYSK
                     GYKNLTFNEPFFQGHFPNNPIMPGVLQAEALAQLGAGILMTVPEYKGKLVVYAGIDNC
                     RFKRIVRPGDRLDMEVELTKVKGPIIKAQGKAMVDGQLAMSADMIFSVV"
     gene            complement(21859..22674)
                     /locus_tag="CPT85_07460"
     CDS             complement(21859..22674)
                     /locus_tag="CPT85_07460"
                     /inference="COORDINATES: protein motif:HMM:PF03331.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21789.1"
                     /translation="MNMTALNTIAKEATVTSKGLMTGMDSTARLVPSDKKGIRFHLGD
                     KTVEAHVDNVVSTEHCTVIGNQDIKVMLIEHFMAACAICHIEAIDVYLSHFEMPILGG
                     GSAEWVEIFKEAGNRAQESYILSEPVSYFNGKTHIVVMPSDEFKVTYSVNFNHPELNH
                     RWVSLDKDKLNEIIEARTFGYLKELEMLQAAGYARGVSIENTVGLTEDGYTTELKSDF
                     EPAKHKILDLIGDFYLTGFNPMDLKAEVIVKEAGHAVHVKVAKILKDKIQKEN"
     gene            complement(22674..23762)
                     /gene="lpxD"
                     /locus_tag="CPT85_07465"
     CDS             complement(22674..23762)
                     /gene="lpxD"
                     /locus_tag="CPT85_07465"
                     /inference="COORDINATES: protein motif:HMM:PRK00892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="DAB21790.1"
                     /translation="MKNYRIEEISEIVGGILSKVADASIDKLRPPLLADENSLALALS
                     EEEIENLAKTKAKAALVPLGVNFEHISTIEVERPRLAMMKLLHLFYDAPDAPIGIHPS
                     AVIHPEAKIGENVSIGPNVVISRNVVVGNNTKLLANIYIGKNCTIGENCLFHPGVNIG
                     DCSQIGNRVILQHGVSIGADGFSFVTENPDVIEQARKEGAVKEANTKQKVYKIPSIGG
                     VVIKDDVEIGANTCIDRGTIENTVIGAQTKIDNLVQVGHNCKVGEACMLVSQVGLAGS
                     CKIGDRVVIAGQAGLADHLEIGSDSIIMAKAGVTKSFPDKSIIIGAPAVPRKDFIKQL
                     KMLKSAEEAVAKFKKYEHLLESFEQGEQ"
     gene            23966..24241
                     /locus_tag="CPT85_07470"
     CDS             23966..24241
                     /locus_tag="CPT85_07470"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21791.1"
                     /translation="MAINPAGDAQNNRGGNGQFRPLLRKAQSQNKLQASLAILDKKDI
                     RMRFKNSRDPLYIAFDYIDKRPVQELAVEFVKDSLFDIVNFISGGNR"
     gene            24315..25259
                     /locus_tag="CPT85_07475"
     CDS             24315..25259
                     /locus_tag="CPT85_07475"
                     /inference="COORDINATES: protein motif:HMM:PF11741.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21792.1"
                     /translation="MLKKIILIFFIFILNLFSLVQAEEALKINSINFDNSDNIIFLGS
                     SSKVMYINVKSMKLSNPDRISFDIDNAVLTKPNSSWTFKNSDIKQVKLSQFTTDPDVV
                     RMVITYDKGFNVNKLKLYRIDNNLVFVYNKKLFAQSNLRSVYSDEKSKQNYYEYTLIS
                     QDVKTSAAAADTSNYVRSPEAVEIQKAFNSKGELVKKDPVQITVSKPHEQKLKSNFHV
                     NKIDVKRGNALIRGIGSIAVENPFIVANPTRLVFDMPNTYVAPEIRNKEYVLSEKETI
                     KIGQFEPTKARIVVTXSVLFILMIHRVFFWHTMTEFLV"
     assembly_gap    25188..25189
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            25256..26179
                     /locus_tag="CPT85_07480"
     CDS             25256..26179
                     /locus_tag="CPT85_07480"
                     /inference="COORDINATES: protein motif:HMM:PF01520.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21793.1"
                     /translation="MKLYDRTSSTYSYAAKKMNDTTDVLQFVFTEPIIHSIKKFSNKV
                     EINLYNSSGFDHAAYRRNLNSDVLSKLRTEALPGCGIKVIIPIQKTTELDYQQSFDNK
                     QLRLTIVTPKEETIKQSKPAPAIIARNPNVKTIVIDAGHGGSDVGATREGIYEKDITL
                     DMSKRLAAILKKKGFNVLMVRSSDEYVSLQDRVTFTEENKGDLFVSIHVNSSVTPEGN
                     GLETHYYTPQSYEFAQIVHKEFAAAIDSKDRGLFKSKFYVINHTTCPSILVETGFISN
                     PEERKALMTAERKQKTAEAVAKGILKYLGKD"
     gene            26180..>26841
                     /gene="murI"
                     /locus_tag="CPT85_07485"
     CDS             26180..>26841
                     /gene="murI"
                     /locus_tag="CPT85_07485"
                     /inference="COORDINATES: protein motif:HMM:PF01177.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="DAB21794.1"
                     /translation="MEISEKDKAIGVMDSGVGGLTVLKQLLNVMPSENYLYFGDTKNL
                     PYGEKTKEQLIEIVKEIFAFFEKQNVKAVVLACNTTSATAYEELKDKYSFKIYPLIQT
                     VSKCVVLDKSLDRIGVMATQATVNSQKYTSELKKNNPAVEVFEQACPMWVPIVENQIK
                     DYDEKTVITGYLNSVLDFNPKKIILGCTHYPYLLDKLVKYAPEDLFINPAQLFANYIK
                     QD"
     assembly_gap    26842..26863
                     /estimated_length=22
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(27068..27223)
                     /locus_tag="CPT85_07490"
     CDS             complement(27068..27223)
                     /locus_tag="CPT85_07490"
                     /inference="COORDINATES: protein motif:HMM:PF01503.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21795.1"
                     /translation="MNEAFETVNFENKDGLGKEAADLTYFMLTFMAMHNITPQDVLNH
                     LESTMRE"
     gene            complement(27223..28278)
                     /locus_tag="CPT85_07495"
     CDS             complement(27223..28278)
                     /locus_tag="CPT85_07495"
                     /inference="COORDINATES: protein motif:HMM:PF01502.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="DAB21796.1"
                     /translation="MLIPTIDLMDGKAVQLRQGMEKVLEREDVIELAKYYGRFGEVAV
                     IDIDAAVGNGNNETLIEKLCKVAPCRVGGGIRDAKKAQKFLSWGAKKIIIGTAANEEL
                     LSKLPKEKVLIAIDSKDGYIATHGWTKTTSAEPLDFVKRFNNLCSGFLYTVIENEGMM
                     QGADIDSIKLIRAATTKELIAAGGICSVDEIVKLQKMGVHTQLGMCIYTGVVKLEEAF
                     VKCMDFEKRFGYIPTIVQDYATKQVLSLAYSTSQSLLQALKTGKGIYFNRSENKIFTK
                     GETSGNTQELIEARFNCDRDAVLFMVNQKGNACHLGRYSCFGNKDFSINELYKFLVTR
                     KSLLPDNALTTRLFXXK"
     assembly_gap    27231..27232
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(28298..28900)
                     /locus_tag="CPT85_07500"
     CDS             complement(28298..28900)
                     /locus_tag="CPT85_07500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00488"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="DAB21797.1"
                     /translation="MINMAYTENKIEEIQNWLKENLYEERYIHSIGVMEAAVELAQMF
                     NMDVEKARITGLLHDAAKCFSNEKLLEIIHEHIPEVQDCELLNYKTLHAPVSAYLAKE
                     KFGINDKEILDAIRWHTLGRCGMSDFEKIIFLADKIEARTREEEFRNQCLELLKEDNG
                     LNKAMFKCFEATIKSLVDRRLAICHITIDVYNELLAEIEK"
     gene            complement(28872..29462)
                     /gene="nadD"
                     /locus_tag="CPT85_07505"
     CDS             complement(28872..29462)
                     /gene="nadD"
                     /locus_tag="CPT85_07505"
                     /inference="COORDINATES: protein motif:HMM:TIGR00482"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="DAB21798.1"
                     /translation="MLVSRDXSIHNAHLKICEYAKEKFHFDKILVIPAANPPHKKVDE
                     TLSYHRLKMAQLAVLDKEYLEVSDIEYLRDGLSYTYLTVKELYEKYDIEGKINFIIGT
                     DAFKKIESWYESDKLKNMLDFILFAREGEKELEADATYLHNLREKGYNYKMMKLPFMD
                     ISSTRIRENIYNSVPIQKLVPAEVEKYIDKYGLYRK"
     assembly_gap    29442..29443
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(29488..30429)
                     /locus_tag="CPT85_07510"
     CDS             complement(29488..30429)
                     /locus_tag="CPT85_07510"
                     /inference="COORDINATES: protein motif:HMM:PF00485.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21799.1"
                     /translation="MFGFYFRQDNKRNTKLQNTVTQDFISAPKQKQALSSFPFNKAAD
                     KILLQYVEKRLNKIFFDEVNSSDSIFKKVSNNAVYKMALFLSGNITRACSIGIAGETA
                     SGKSTIAYDIINTIQSFADEYCIENVITRLNTDDYYYDRSDMVKKAGSFAEFAKHYDL
                     DVPEALELELMKKHIKQLLFGDTVYLPKYDMSGTAIRKDNVTKAEPSKIIISEGLFTL
                     TEKVVDAFDFKIYVDVSHNVQKERFYKRAQERDLGDSADEVYENASSKAKIHIHPTAM
                     QADIILSGEADRAAYKKFINKILALVEEIHCKNFALN"
BASE COUNT         9081 a         5577 c         5367 g        10462 t
ORIGIN      
        1 tcctctcaaa tgaggggtat caggtttata tttgtgcaag aaatgaagaa atactcaaaa
       61 ataccgcagc tcagataaat gcctcaggat attttgtttg tgatttgata aatgataatg
      121 atgtatttga gctaatgcaa aataattttg atattttgat aaataacgca ggcgattatg
      181 tgtactcccc agtagaaaaa acggctgatg aagatattac tcgccttatc aagttgaatg
      241 tggaagttcc gtataggttg ataaagcttg ctgtacctta tatgaaaaag cagcattggg
      301 gcagaattgt taatatcggt tcaatcagcg gcattgttgg cgaggctaat gcatctttgt
      361 attctatgac aaaatctgct tttactggat tttctaaagc gctggctctt gaacttgcag
      421 aggataacat aacagtaaac acaattaacc ccggatgggt tgagacagag cttgcgcagg
      481 atgctgttga aaagagtgat ttttcttatg aagaagaaat agaaatgatt cctcaaaaaa
      541 ggttcatctg tccggatgaa attgcaaacc ttgtaaaata catggtttct gatgaagcaa
      601 aaggcatgac tgggcaatct gtgagcttgt gcgcaggttt gagcgcaggt taaatttata
      661 ctaaagttgt aggaattttg tttacaaatc ctctaaaaag atgattatac ccttccttta
      721 agatggtact ttagataagt attctaatta aactatgagt atcaagtaag taaataagga
      781 aggcaagatt aaaaatgaaa atctctcaaa caaatttttc aatgttcaag cctatgtcta
      841 aagaagaaag acaggaagta cattcaaatc cgtttggaat caatttcaaa ggtaacgtat
      901 taacatcaga tgtgtttgaa tcatctaaag caaaagaaac taacagctca acaaacccgt
      961 ttgcagcatt ttcttctgta acaaataaat caaaaatggt tgcaagtgca gtagtcggcg
     1021 gtatgaattc ttttaacgaa gccttccgtt caagaattaa ttctattatt tcttttggca
     1081 gacaggtaaa agataaaatc gcaaactctt gggaaaaagc taaaaataca gaaatttcac
     1141 ttgattttaa aggtttggct gaatctattt catcaaaatt tgataacagc tacagtgtaa
     1201 acaatctttt aaaacgacct gtcgatgatt tgcatacaat gtttgctgtt gaacacgcag
     1261 catacaaaga aagtctgaaa gcgtaggtgc cgtaatgaaa actaacagaa tcgataatat
     1321 tatagaagca ttaggcagac acgaagatcc gaaatctatc caaattttgg aagaaatcgg
     1381 tacaaactct gaaattgatg aaatcagaga aaaaacagct cacgctctta tcagaaaaaa
     1441 ttcacccgaa gctttgaaag ttgttattgc atcttctggc aaaggtatca atgacctttc
     1501 tgcaagagta gcaatgagcg ctattaacga aattcttggc ttgaacgata aaactgaagt
     1561 tttaaaagtt cttgaagaaa caatgaacag cgaagaaaaa acagaagtta aagacactgc
     1621 tcgttcagta aaagctctta tcacatattc aatgtaaatt aacgataatt gtaaaaaagc
     1681 ccttctttta aagaagggct tttttattta tgctgtgaaa acaggtttct gttcggggtt
     1741 ttgtttatct tgctgtttta gcggattatc accaaatagg tcaggaaggt tgttggaaaa
     1801 tacatttata acctctgttt cgaaactttt tagcaaattg cctatctggt cttcgctaat
     1861 atttaaatct gcaacatcaa gattggcaaa atttacttct tcctggctgt cttttggtat
     1921 gccaaatttt tctttatcaa atagagtttc gcttcgtgct gtattaaaat tagaagcttc
     1981 ttttaattgt tcttgcaatc ccaaacttag tctgtttacc ttcatgaaaa tctccttttc
     2041 ggcttaaact gcttagactt tctgtttgtt atatcggatg attttcacaa aaactttatg
     2101 atttaataac tgttttttac ataagttaac aattatgcgg tatttctttt acaccgtctg
     2161 tgataaattt taaatcttct attacctgaa aacgcttgct gtcaaataca tgcggacaat
     2221 aacgttcaag tacaaaaaat gtagggccag agcctgacat aagagcctta gggattgctg
     2281 cttttatttc gagaagctct tgataatcat tgataacagc taactcaaga ctgttaaaca
     2341 aaaaatttgt actaaaatcg ttcatcagct tttctgtgtt atccggcact gtcttgtctg
     2401 acatttgagg aaactttgtg tatgcttctt tagcggaaat tccaaagcca agaggcttta
     2461 taagtgttac atactgctgc ttggtcggaa ttttttttgt tttttcgcct cttcccgtgc
     2521 acaatgcagt accgccatga agacaaaaat ttaagtcaga ccctaaagac gcacacagta
     2581 gttctatttc ttcattggaa agcggattgt taaatagttt gttcaaagca aaaaaagctg
     2641 ctgctgcgtc tgtgctgcct ccggccagac ctgcttctac aggtatattt ttttctatat
     2701 aaacttcaat ttttttgtta tttatcgctg ttttttcaag aaatttttca attgctttgt
     2761 atacgagatt tttgttatca tacggtattt tgtcagagtt tccgcacagt gaaatttgtg
     2821 ttttgtcgga atcagttaca tcaaaggtca aataatcata aaggctgatt gcctgcatga
     2881 tgctttttaa gttgtgaaaa ccgtcttctc ttttatccaa cacttcaagc gtaagattta
     2941 tttttgcagg tgcagctatt tttatgcgag acattgtttt tttaactcct cggaaagttg
     3001 tgccaatttt tctatagaga ggatctcacc tctaacattt tcgccccatt gtagagtttc
     3061 cagtgttttt gctactgcat ctttattaaa tccggcattc ataagagaat tcttcaaatt
     3121 ttttcttctt gttgcaaaac aggcttttac aacttttctc aagaatttgt aatcttcaac
     3181 tttcaccctt ggcccattat tgattgttat ttttacaagc gccgaatcta cttttggtgc
     3241 gggataaaaa gattttctgc caactttttg gataagttcc acatctgcat taaattgggt
     3301 caaaatagag agcagcccgt attgtttgga tggtgcgttt tcatcagcca caagtctttg
     3361 tgctacttcc cattgaacca taagaacaat ttctgatatt ctgtttctgt tatcgttgtt
     3421 aaggtcatct atttccccga gcaaatgcgc aagaatgggg cttgtgatgt aatacgnnct
     3481 ataaccttaa aagtcgtatc ttcaaggtct tttagctgtg tttttaatat atcattatgt
     3541 atgagtttaa acttttccgt ttttatatgc tgtagcgctt ctattgcgtc ttcgtcaatt
     3601 tcaacagcgt atactttttt tgctttgtta actatatttt ccgtaacaaa tcctgcgccg
     3661 gggcctattt caagcactgt atcatcggga ttcacttctt ccacaatacg gtctatcaca
     3721 ccttcatcca caagaaagtt ttgaccgagg cgtttttttg ttttaaataa ttttgctctt
     3781 aaaaaataat cactcataag ttgtatgata caataaaaaa catgataata atacctgaat
     3841 accttgcaat ccatgaacca aaagaggaat tgcttgaaat aatcaataat aaaacgttca
     3901 atgacagagt cttgtatgaa aagcaatctg attttcacga cataaaagtg atagaaaacg
     3961 aaataggacg ctttttgcac tacaaagata cttatcaggc aggatttata aatacgcagt
     4021 tctacaaagg caatctgccc tatatcaatt attttactat tccgtatctt attaaccctn
     4081 nctgatataa aaaatattct tttaatagga ttcggtacag gtaaaatagt caatgactgg
     4141 gaaagacttt ttgataacct tgattcaatt gatgtagttg atattgaaga aaacatattt
     4201 gatattgcag cagactattt tgaattcaaa aagtcagaca gcattaactt ctttttgcaa
     4261 gacgggctag tatttttaag agaaaacaat aaaaaatatg acctcatagt tacagatgtt
     4321 gcttctgacg acggtattga tgacagattt ttaagtgatg attattttaa attgattaaa
     4381 aaatctcttg ctccaaacgg gttgtttgtt tcgaatcttt gttcgagtgc ggatttaaca
     4441 tgtaaggaaa atactttctt tcattctatt ttagatactt atcattctca ttttaagcag
     4501 gtcagtattt ttaaaggtaa tgaatctgat agggtttatt acaaggcatt ctttgatatt
     4561 gatgagaggg tgattgatat cacaaatgtt attttaattt cctcaaaaca acaattttct
     4621 gttggcaagg attatgaaaa aattaaagca acagggcttg atattgtgcc gtatgttaat
     4681 gatttacagt ctttttaatg tttttaatat acaaggatat aaaaaagtaa tataaaaagc
     4741 tgttaaaaac gctattattg ctgctgcaat gtgttttgcc ataaacagta taaagacttt
     4801 attcaaaacc atcattaaaa catacaaaac aattatgcct gatagaagtg aaataatttt
     4861 ttttgtatta ataccttttg ttatttcaaa tttaacaaac cttttttcca gcagacagcc
     4921 tgtaaatatg cccagtaaaa agcctatttt tccgtaaact ccgtgcttca tctctaatgg
     4981 gttaaccagg tcttttaggc tgtcataggt ctccagctgc atgcagcatt ttaaatgaag
     5041 ataaatacat aaaagcgctg tcataaccag taacacggaa taaaaaatca aatctcttcc
     5101 gtcttttgca tcaatccatt ttaaaagcct gtcaattcca aacatcaggc atatgccgat
     5161 taggattgaa acaattacat cctgcggagt gtggacaccc acatagttgc gggaaaacgc
     5221 aacaagcaga acaaacgtta tcatcgtgta gcgcactatt ttgttattcc accaccagta
     5281 agcagcagca ccccagcagc tcattgcgcc tgctgtgtgc ccgctcggga aagagtagcc
     5341 gtcagcagcc ggaagagcct tttcaagagg gcacacacga gagtcaataa gccacggtct
     5401 ttttatacaa gcagtcatct tcaaaaaaac attaacataa agtgtcagtc caaagttaaa
     5461 gaacaagaag gttcctgctt ttttatttat gccccagtaa ataattgaaa ggaatgtaag
     5521 tggaataatt atttcgccaa gccaggttgc acccataaaa aatccgtcaa acactccgtg
     5581 tgttacttcc ctaaaatgct gcaaaagcaa taaatattgt atttgtaaat ccattgttcc
     5641 aaacatagtt taattattta tattctgttt taagtacgcc tcaataaatc cgtcaatgtc
     5701 tccgtccatc acagagtcta cattgcctac ttcgtatccg gttctgtggt ctttcaccat
     5761 tttatacgga tggaaaacat atgagcgaat ttgagaacca aaatttatgt caaagttttc
     5821 gccttttaac tctgcaagtt ttttgtcatg ttcagcctgt ttgatagcga gcagctttga
     5881 agcaagcatt tgcatggctg tttctttgtt ttggagctgt gagcgctgct gctggcattt
     5941 tacaacaatg cctgtaggtt tgtgcagaat tcttacagcc gtttccacct tgtttacatt
     6001 ctgaccgcct gcaccacctg agcgcattgt atcaacctcc aaatcttcag gcgggatatg
     6061 tattgctttt tcaaaatcct caataacagg gcttacctct aacgaagcaa agcttgtctg
     6121 acgtttgccg tttgcattaa aaggcgagat tctcacaagc ctgtgcaccc ctcgttctgc
     6181 ttttgcaagc ccgaaagcgt atttgcctgt aagttttatg gttgctgatt taatgccggc
     6241 ttcttcgcca tctgatttgt ccaaaagctc tactttccaa tttttggatt cagcccagcg
     6301 tgtgtacatt ctaagaagca tctgtgccca gtcttgagca tctgttccgc cggctccggc
     6361 gttgactgtt aaaattgcat catatgtgtc atactcaccg gacagtgtca tttctacttc
     6421 ccactcattc atctcttttt caagattatc aagggtgttt tgcagttctt cccacagcga
     6481 ttcatcttct gtctcgttgt ataattcgat gagcacattg cagtcttcaa tactcttgtc
     6541 ccaattagaa gttttttcaa gagtgttttt gcactctgta agctcttgtg agagctttgc
     6601 agctgattgt ggatcctgcc agatatcctc gctttggagt tttgagtcca gctctttttc
     6661 ctttgcttct acctgagcaa ggtcaaagac actccttcgc tttgttaatt ttcaaagcca
     6721 attcttctaa cttttgtttt tgttcgatat ctatcatagt aaggctattt taacacgaaa
     6781 attaacgtaa aaagtattct cttggaggtg tgattttttc ttgcatccag ttattaaatt
     6841 tttctgccat ttccggcttt tggtcataat gtgcaaagaa aaacagcttt gtcagagggt
     6901 gccatttgta ttctttttca taatcctgta tattttcgta aaaatcagtg gtattgcctg
     6961 cattctgaca ggtggaataa agtttttctt ttctttgtgt taaatagttc tctataaaaa
     7021 gttctgtctg atataaatca gcatcccagc atagtctgcc taaatcttca aattcatagt
     7081 ctgttggctg caattttgca tcgtatttaa gtttatattc aagaagttct tttgttctgc
     7141 ctgttccttc gtaatctaaa atgacaactt ttttgttatc ttttttgtat ttttcaatat
     7201 cttcaactga cagagagaaa tttttaaggt actttgccca gtctatttgt ttgcttgaat
     7261 tttttaccca gcatccgcta ttgtttaaca catctttgga aaaaggcata tttattgtct
     7321 caacgccttt ttcttttatc acttcaagca tacacgacgg tgagcttccg atacctatta
     7381 gaatgtatcc tccttgaccg tattttttat caagcttatc tttaacaata ttgctaaaac
     7441 catcaagaaa catcacatct tcttgtatga ttgatttcac cctgtttttt ccataagaaa
     7501 aattaaacct ggtatttaca aattctnnct cttaactgtt ctttttcttt gttagaaagt
     7561 ttgttatagt catcacgagt aaagcttttg gctgcttcca tttcgggtgc ggaggttttt
     7621 aagaagtttt ccaactctat tttttcatcg ggagtgccta tgcttctttg aattatgttg
     7681 tgatgacatt tttgattttc aaactgagaa tgatactttt tgtagttatt gatatctttt
     7741 tcatcgcaat ttatttcaag accgtttgta tcaagtatgt ttttatcagg tgcttgtatt
     7801 ttttcaagca gcttgctgtc tttggcttcg tactggtaaa ttgtattgtt aaaaatttta
     7861 ttacgagagt cttgatttaa ctcctttaaa acaggttttt taaagtggtt acaaatcttg
     7921 ttccacaaac cgttttgaga atcttgtgac aatttttctg ctgtcataac cgcaaatttt
     7981 agattattaa tcatttgtgc cggagtaagt tttgttgata tggcatcaga tatgttttta
     8041 acagtttctt ttgttcttct gtccacaatt gacaggcaat caccgtattt gtttacacaa
     8101 ttgcggttag tgaaacgttt gtctttatac ggttgtgtca caaaaatatc atagtcatta
     8161 ttgtttttgg ctttttcttt tagagccttt atgacatctg cttcgtattt aaacaattca
     8221 cggtatttta catctggcag ctgctcattt gtttctgggt ccaactggcc tgtgacttct
     8281 gtattcaatg ccgatataac attttgactt attgctttaa aagagatatt catacacaaa
     8341 ataaattgcc taaaaataat aattgcctga ttttgaaggc aattgtatat ttatttacat
     8401 ttgttaattt tttgttaaat caatagcaaa aaaattgatt tacttgtatt gtaagaatat
     8461 aaaaaactag gagagtatca tggtaaaaat tgcaccctat tcattaagca gcagagtttc
     8521 ttttaagaat aatcaggaaa atcctgttaa acaacaaaca caaaattctg aatattataa
     8581 aactacttca ggtgttaaaa cagctgccgg ttatgctgca agcgggctgg ttgcaattat
     8641 agtgagcaat caccttgttg aaaaaatgtc taataagttt gatgaaatct caaaactgtc
     8701 aggaaagcaa aaccctgtga aaaatctacc taaaatcgga cttggccgta gcgcttggtt
     8761 cttggctact acnnnnnnnn nnnnnnnnnt aaataaaaaa cgcgaaaaac tggcaaatga
     8821 tttaaaaacc aaagatgctg atactttgat gaaagaagat aagcatattc aaaaaacaga
     8881 taaaggtaat ttgtattaca aatccagcat ttataaaaat gttggtcctt tattggcgtt
     8941 gggtgttttg actcttaata ccggcataaa tattgtcaaa agaggagcca aaagtcccat
     9001 gagacttgat gtatgggaat taattgacgt attatgcaca gccggtattg ggggttcaat
     9061 gcttggtgca attacagaca aattctctaa caaggctgcc agagaatttg ccgataaaaa
     9121 ataatttgta atttcaaata gaaaagggtg agtcatcacc cttttttatt accccttttt
     9181 tgcggctcct gcaatttcag aatccagtct taagaaaact ggtttaatct tttctttttc
     9241 tgtaattttg cccacaggaa tttctcccca cttgagctcg tcaagtttta cttctacagc
     9301 tttttcgctt ctgtttagtt gttcataaac atcttgcgaa atattaggcg tgtaaggagc
     9361 aagaagtgct gcaataaatc tcatagattc aagcacgttg tacaatactt tggcgcattc
     9421 ttccattttg ccttctttag caaggctcca gggagcagtg tcgtttacat atttgttgac
     9481 tgtatttgag aaattaacaa tctcctgtgc tgcttctgcc acttcgtatt tgtcaaaacg
     9541 gtttttaaca agctgtacgg tttttaaagc ttcttttgca atttcattat ccgaatctgt
     9601 tataaattcc tgtttgattt ctccgtcaaa gtattttacc tgcatattaa gcgttctgtt
     9661 taagaggttg ccgatgttgt ttgcaaggtc agcattaact ctttctttaa agtctaagtc
     9721 agagtagttg ccgtctctgc cagtaggagc tgtaaccatc atgaaatatc tgaatgcatc
     9781 aggatgagaa agctcaaatg tttccattac atcttttggc gcaataacgt taccgattga
     9841 ttttgacatt tttgtctggt caattgtaat ccagccgtga gcaaggattg tttttggcaa
     9901 aggaatatcc agtgccatca agaatgccgg ccagtaaata gcatggaatt tcaaaatatc
     9961 cttgcctatt acctgtacat cagcaggcca gtaagtttta aacatatctg acggagtttc
    10021 agggtcataa cctaatgccg tgatgtagtt tgatagcgcg tcaatccata cataaatgat
    10081 ttgtgaatcg tcaccaagaa caggtatacc ccagcttacg gattcttttg aacgggatac
    10141 ggagatatct tcaatgtgtt caagctggtt taaaacttcg tttgctctaa attccggttg
    10201 aataaaatca gggttctttt tgatatgttc aattattctg tctttgtatt ttgaaagttt
    10261 gaaaaaatag ttttcttctt ttacttcttc cggtttttta aggtggtcag ggcaaagtcc
    10321 gtcttccgtc aaatcacggg gattaaggaa tgactcgcag ccagagcagt acaagcctgt
    10381 ataagagtgt ttgtaaatat cgccgttatc ctgcaatttt ttaaatattt tttgaacaat
    10441 tttttcgtgt tcttcatcag tggtacggat tagtttgttg taagaaatat caaggccagc
    10501 ccagcattct ttgaatttgt ctgcgttttg atcacacaat tcttttggcg taatacccat
    10561 tgacgcagct gttttttgga ttttaatacc gtgctcgtca gtgcctgtta agaaatatac
    10621 atcgtcaatt ctttggcgaa aatgacgtgc aataacatct gtttgtattt tttcgtaagc
    10681 gtgtccaata tgaggagctc cgtttacata atcaatagcc gtagttaagt aaaattttgt
    10741 cataatctat cccactttta tcttatttgc taagataaaa gtaacacaaa aagctgactt
    10801 aataaaggag ttataaaatg tctgaacgtt tcaacaatag aaaaaatgat gaattaagag
    10861 aaattagttt tataaaagat tatacaaaac atgcactaag ctctgtgctg gtgcagtttg
    10921 gcgatacaaa ggttattgtg acagcctcgg tagatgaaaa agctccaaaa tggatggaaa
    10981 aagatgaccc gagaggctgg gttacagcgg aatactcttt gcttcctact tcaactcata
    11041 caagatgcca gagagaacgt tcgaaaattt caggacgtac gcaggaaatc caaagactga
    11101 ttggcagaag ccttcgttct tgcgtggact tggaaaaaat gacaggactt actcttacaa
    11161 tcgatgccga tgtaattcag gcagatggcg gaacaagatg tgccagcatt tgcgggggat
    11221 atcttgtgct tgaagatgct gtaaataaac ttatggcaca gggtaagctt gcacaaaacc
    11281 ctatacttga gcctatagca gctgtttcaa taggactgat tgatggcgaa gtaaaattgg
    11341 atttggatta ctcagaagat tctcacgcac aggttgattc aaatgttgta atgacaaaaa
    11401 gcggtaaaat catcgagttt caaacaacag cagaaggcaa cccgtttacc aagcaagagc
    11461 tgtatcaaat tcttgaaaca gctgaaaatg cgatacaaaa aataatcggt atgtattaat
    11521 acataccgat tttaaaatct atttctatgg tttttgctca gcttctccgc ttccgcttcc
    11581 accggcgtta ctgctcttat gatttatttt tccttcttgc aaaacttttg ctgcacatga
    11641 aagccctgct ttatcagtaa aacaatcacc ggctgcaaaa cctgaagctc ctgccggtac
    11701 tatgcctttg ccttttacaa ggcagaattg gaatacatct tcgccanngg ggtctgtgtc
    11761 cgttaacatc gacaacaaac ttgccaaagc tgcttcctat atcatccaga gaaatgtttt
    11821 cggtttgtcc gcagccgaca tttacatatt gtatagccat accgtcagcc agaattgctg
    11881 aaaaaccgag ctgttctagg ttttgataat tttgtccgtt taggcctttt atcatacccg
    11941 gtgtaaaaca tcctgcttga ccgcttccgc atatttttat tgtatttagg tttttagtga
    12001 attcaggcca gaatttttct gcattaagcc aggccatacc caaccctaca ggacctattt
    12061 ctgcttttac ttttgaaaca ccctgagtaa gtgtagaatg tgctttttgt aacgatgtag
    12121 caagttcctg ctttttaaca ttctggttta aagaaggaat cgtcattgca gaaataacgc
    12181 cgataatagt caatacgacg agaatctctg ccagagtgaa agctttttta atgtttaatc
    12241 ttttcataaa ccctctgttt cttcattttg tgtaactgat tttattgaat tatacgctat
    12301 ttgcgtaagt ttttcaattt cttcttccgt aattatgaaa ggtggcataa aatagattac
    12361 attgccaatg gggcgaagaa ttgcgcctct tttcattgcc tcgagaaaga ctttgtgtcc
    12421 tattctttgg ttgaattcat acggctcttt tgtatctttg tcttttacaa gctccactgc
    12481 acctatcata cctatgtgtc tgatatctcc aacatgtgca agttttttaa atttttgcat
    12541 ggcctgtctg aatacttctg ctttgaacgg caaattttca ataatttttg cttcttccat
    12601 tatttttaaa gtttcgtttg caacagcaca ggcaatcggg tttcctgtaa aactatgtcc
    12661 gtggtagaac gtttttaatt tggaaaagtc gtcataaaat gcgtcatata ttttgttagt
    12721 tgtgacagtt gccgcaagag ggatataccc tgctgttatg ccttttgcaa cgcagaaaat
    12781 atccggtttt attccggcat gttcaaacgc aaaatatttg cctgttcttc caaaagccat
    12841 tgctacttcg tcatcaataa gcaaaatatc gtactcgtca caaagaattc ttaacctgtt
    12901 caggtattct gcagggtaca ttctcatacc cgcagcaccc tgcaccaacg gctcaacaat
    12961 tattgccgca atttcattgt ggtgttcttt aaacagtttt acaacatctt taagacagtc
    13021 tatattacag tcgtgcttgt taagaccttt cgggcatctg taacaatatg gcgcatttac
    13081 tttaagtgtt tcaaacacaa gcgggttaaa tacttcttta taaatatcaa tacctcccac
    13141 agagacagag cccaatgtgt ctccgtgata tgaatctgtc atggaaacaa agtatttttt
    13201 ttgaggctga cctttttgat accagtattg gtaagccatt tttattgcaa cctctacagc
    13261 tgttgagccg tcatcagaat aaaatacttt agaaaaaggt tctccggcta gttttacaag
    13321 cctttcggca agctctattg cgggtttgtg agtaaaatca gcaagaagta tatgctcaat
    13381 tttgctcgcc tgttcataaa gtactttgtt gagtcttggc acagaatgac cgagagtgtt
    13441 tacccaccag gaggctactg catcaatata tttgttgcca tcagcatcat atacgtatat
    13501 tccttcaccg tgttcaatca gtgttggttt atagttgttt ccctcatact gtttcatctg
    13561 tgtatcaggg tgccatacgt attttaaatc tttttctatc caattatctt tttccgttct
    13621 cattttatat tacaaacttt ccgtctttgt atattaaaac atcgtctgca taaatttcgg
    13681 agccgttttt catgtttttg attaagtccc agtgcagacc tgaaacattc tttcctcctg
    13741 cttcggggta cgaagcgcca agtgccatgt ggattgcccc tccgattttt tcgtcaaaca
    13801 gaatattgcc tgtgatatct tgaaccatat tgttggtgcc tattgcaatt tcgcctacga
    13861 attttgctcc ttcatccata tttatcatgt taaggaaaaa ctcttcacct ttttcagcac
    13921 tggcttcaac aactttgccg ttttcaaggc gtactcttac tttttgagct tcgttgcctc
    13981 tgtagatttg agggaagtca aaatagatgg ttccgttagc actgtcttca acaggtgagg
    14041 tgtaaatctc tccgtccggg aaattgcact ggcctgagca attaagccat tttcttcctg
    14101 ttgtatcaaa agttatgtct gtttcttctc caattatatg gagctttgtt gttttgttta
    14161 ggtagtcagc cagcctttgc tgttctttat cgatttcttt ccatttttca ataggattat
    14221 ccaaatgcaa ataacaagct tttattaaaa attctgtata ctcatctaat gacatatttg
    14281 cttcctgtgc cagagcattt gttggaaaat ctgcaataac ccatcttaga gaaccttcag
    14341 ctgctctttt tagcattttg tttgagagct ctcttgttgc agctgaacgt tttgccattt
    14401 ttttagagtc agcttttgcc atagattttg tgttaagtgg tgcgcctatt gaaataagta
    14461 catctgcttt ttcatattca atttctgtca tcgggtcaat gtagcctaac tgttcatcgt
    14521 cagcgtattt gataaacgtt tctgcaagcc cgtccatagc tgtttttaca acagggttgg
    14581 ctccttttaa aagcacctgt ttgtagattt ctttaactaa aggttgagct tcatagcttg
    14641 tggccctaat tacaacaagg tcgcccttct gtacttttgt tgagtaatca acaaggacgc
    14701 ctgcatattt ttcccataat gtattcataa actttcctct attttatatt gttaatacat
    14761 tataatacgc gggcaagtac aggtaaatac acacattact atacagccag gtctgtttgc
    14821 ggtcttacta tattgttatc ttttaccctg aaaaatgcta tgcccagtgt caatgttccg
    14881 attctgccaa gaaacattgt tatggataaa atgatttttc caatatcgct taattccgga
    14941 gtaattccaa gacttaatcc aactgttcca agtgctgatg ttgtttcaaa aaacagctcc
    15001 ataaaactgt ggttatcaac aatacacatt aatagtgtac tgataaataa gattaacata
    15061 tagcttgtgg cagcagctgc tgctgtcatt actctgtttg cgggtataac gcgttttaag
    15121 aatgtaattt tttccgggtg gcctcttaca acacttgtga ttataccaag tatggccgta
    15181 actgaggtgg tttttatgcc gcctcctgtg ccggatggag atgcacctat aatcattgca
    15241 aaaattaaaa ccaacaaagc tgcgtcagga agttttgata catcgaccgt attgaaccca
    15301 gctgttgtcg aagcagacat tacctgaaaa aaagctgaca gggcatcggc accggatgag
    15361 ccaatgtaaa taacagaccc tgtcagtgta atcatcaccg taatgaacag aataattttt
    15421 gtggtaaacg ttatttcctt gcttttgtta gtcagtcgtc tgtatatatc catagggaca
    15481 ataaatccta ttgcgcctgc ataacaaagg aatgcaatga taagatttac tgatacatca
    15541 ttttgaaacc tgcaaagacc atcagcatag atgctgaatc cggcagtgga aaatgctgat
    15601 acacaatgaa aaatagcaga ccacagaggt ttttgcagtc ccagttttga aaattcaatg
    15661 cacaaaagta ctgtaccaat aaattcaaca attattgtgt aaattattat gttgctaata
    15721 aagtgtttta agtcaaaatt ttcaggcata gaaaattctg ctgaaagaat cttcactcgg
    15781 tgtgtagaaa tttttttgct tgtagaaaga attaaaaacg aggtcaatgt catatatccg
    15841 attgcaccaa gttgaattaa tccgagaagt ataatcttgc caaagggggt gtacatatct
    15901 gatagagaac ctgttgtcag gcctgttgtt gacatagccg aaactacgtt aaataaattg
    15961 tccacaaaac caacaggtat tttttgtgcg aagggtagtg atattaaggc aaccccaata
    16021 ataacatagc caaggaagcc gaataatatt gttttaaaag gatttacttc tttgtcttta
    16081 agttttgttc ttttcatact tttcatgcat taatgtttaa atcagcttgc tttactccta
    16141 cctgatagcc gggtgcaaga tgtgcaaaag gaataaatct tgatgccatt tttgcaagtt
    16201 gtgttcctgc atttgaaatt gaggtaacaa gacacacatt atcaaattgt actgcccagt
    16261 ctttccaggt aagttttctg taatggtctt ctttgaacat ttgtttgttc atttctcttg
    16321 aaattttgtt ccctgcaaca acaccagcta tcaggcttgt cattccgaat aaaaattgaa
    16381 ttggtcttgt gattggaggg aaattatact ttttattaag agctttattt aattttatgc
    16441 cgcctccgac tgcaatggtt ggcacaatat aattgcctat taattggaca atgccttctt
    16501 ttacttttgc tttggcattt tttttatcag tgattaagcc accggcaagg cctccggcaa
    16561 ttgatgaaga tgcaattgct ataacatctt tttcttttag ctcaatgttt tttaagatat
    16621 taacaagacc attaggatgt ttaagagtgg atggtatttt tacaccatga cctcgtgaaa
    16681 tcagtgtaac tgctgtggta acgccgattg cacttcctgt catagcggca atttttgtgg
    16741 agtgtttaat tttattgttt ggattattgt tttttatttc gtttattttc atggtttttt
    16801 aaattttttg tttagctgca aatacatttt aaacaccgat ttttttgatt tcaatacaaa
    16861 aaatcaaatc ttaatgccat cttaacgcca tggcaaaaag cttaattcaa aattgataca
    16921 agcagtgata taatcaagta gggaaaggga aacaaccgtg ccagaggaaa aaataaaaga
    16981 acatattctt gtttgtttat caagctcacc atctaaccca aaggttataa aaacagcggc
    17041 aaaaatggcc aatgtttttg atgccgattt tactgcttta tatatcgaaa tgacaggtac
    17101 caaaaaactt tccagcgaaa acaaaaaaag gcttgaatcg aataccgctc ttgcacgggc
    17161 acaaggtgca aaggttgtga cattaaatgg cgatgatatt gcttatcagg tagcacaata
    17221 tgccaaaact ggtaaggtta cgaaaattgt tattggacgt tccggataca gagccaatag
    17281 tttttttgct ccgcctaatt ttgtggacaa attaatccag cagactcctg agatagaaat
    17341 ttatgtcatt cctgataann taagttcagg ctgtatatct gggccagaaa cacaacaaaa
    17401 aaatatttaa actgcccgag ttttctctga ttgatacttt taaaaccatt gttgtttttt
    17461 tgcttaccac ctcagtttgt ctttattttc aaaaactcaa tatcaatgaa tcaaatatga
    17521 taatgatata ccttttggga gtattgataa cagcctatat tacagagagc aagctataca
    17581 gcattatttc ttctgtttta gcagtgctaa gcttcaatta cttttttaca agaccgtata
    17641 tgactgttgt gtctatggat tcagggtata cctttacgtt ttttataatg ttttttgttg
    17701 ctttgtttgt aagcagtatt acgaaaaaaa ttaaagagca ggccaaacag tcatatttaa
    17761 aagcatacag tacacaaata atgctagata tgagccagaa gcttcaacaa gcaaaaaatg
    17821 ttgaagaaat agatgaaatc acaatcgaac agataaaaaa actgctggat tgtgatgtat
    17881 tactctttga gccgaataaa gaaccggtca gcactgttta tgaatgtttt cctataagaa
    17941 atacagatac agtgtttctt aatgctgcta taccggcaaa aagatacaaa tctgctaccg
    18001 agtttgaaaa gaatcttttt agtgcaatgc ttagagaatc tgctctggct tatgaaaaag
    18061 aaacaataac gcaaacaaaa aacgagttat tattaaaaca caagcaagag gaattgcgct
    18121 ctacactctt gagagcaata tctcatgatt tacgcactcc cctaacagga atatcaggca
    18181 atgctgatat tttgctgaat aatgctgatg ttataagcgg ggagaaaaag catcaaattt
    18241 attctgatat ctatgatgat tccatctggc tattgaatct tgtagaaaac ttactttctg
    18301 taaccagatt tgataaaaat gagattaata tcaaaaaaga atccgaattt atatcagatg
    18361 taatacaaga ggctgtttca catattggga gaaggaaaaa taattataat attaaaattg
    18421 aaattactga cgagtcattg tctgcaaaag tagatgccag acttatatca caggttgttt
    18481 ttaatcttgt tgataatgcc atgaagtatt ctcctgttaa cacaaccatt acaataggtg
    18541 cttatgcaga aggtaaagac ataaaagttt ttgtatctga tcaaggaaac ggaataagcg
    18601 atgaagataa aaaaagcatc tttgatatgt tttacaccgt taataatgct gtttcttccg
    18661 attccaggcg ggggcttggt ctggggcttg ctctgtgcaa ggctgttgtg gaagcacacg
    18721 gaggaacaat ttgtgtaaca gataataaac ctgaaggtac tatttttgaa tttagcttag
    18781 agggcgattt ttatgaataa aggcaatata ctggttatag aagatgataa agctatacaa
    18841 aacctgatag caacaacgct tgagataagt aattattcct ttcaaacagc atccaattat
    18901 gcagatggaa tattaaaatt tacttcgtat aatcccgatg ttgttatcct tgacttaggg
    18961 cttcctgata aagacggtat tgagataata aaaaaagtcc gtactttttc aacagttccc
    19021 attatcgttg ttagtgctcg tacagacaat gatgataaaa taaatgccct tgatgaaggg
    19081 gctgatgatt atcttacaaa accgttcaac acacaggagc ttttggctag aatccgtgtt
    19141 gcaatcagac acaagacctc tgcaccgggt aatacctccg cagacatttt tacaaacggc
    19201 agtttaaaaa tagattatgc caaaggctgt gtttatgtgg atgaacagga aatccatctt
    19261 acagcaatag agtataaact gctatgtctg cttgctaaaa atataggcaa agtactgact
    19321 cataatcata taaaaaaaga gatatggctg gatgaaaacg gttgtgattc acagctttct
    19381 ctaagagttt ttgtgacaaa tttaaggaaa aaattaaaat ctcctgatta cataaaaacg
    19441 catattggaa taggctatag aatggttaat gtgtaaaagt ttagggaagc ttatttagaa
    19501 tattcatcat ctggccgagt tcataattgt gcgagttttt ttcttttaca attgtatctg
    19561 aataatcaag cagctcgagc agggctgcta ttctgtcttg aaaaattgtt tgcgcttgtg
    19621 gagaatatgc tttttcctca acaagtccat agtttatatc cagtgcttcg ttcaaaggat
    19681 tcatcttttg ctttaaaagg ttaaccatct tttttcttcc ttttaacgct tccgttagat
    19741 ttgttatccg ttctgtaata ctttcaatat attctgcatc aagattgtat agttttagta
    19801 gatttttttc accgattatt tcttttaatt caagtatatt tttcatattg ccgtagaaaa
    19861 agttatcaat ttcactgctg cttttttgtg aaaatgctgt cttgggctgt ttgtctgcat
    19921 tataagcctg aaattttagc ttttggaacc tttgaaaagc ttcttgatca aagtttctat
    19981 ttactttaaa ggttttgatt atatctgcaa tgtgctgttg tggtatttct ttttctttta
    20041 atacacgtgc tatgttatac agacagtttg acactttgcc tgttcctnnt ttacaagcga
    20101 caaaaatctc gcttatgtaa tcttcatgaa agccttcttt gtaaagtctt gccatgttat
    20161 aaaaatgttg tttattaccg ttggctgctt ttaacacttt tgtgatgttt tcttctttta
    20221 cgccaagacg cctcattctt tctcttccgt taaaaggcag aatatgcgtt ttttgggcag
    20281 ctttttttgt ctgttttttt acttgattag taatttctgc agcaggttgt ttgatttttt
    20341 ccggaaaaat ttttaaaata atttgcttga aaaaattaat ttttccacta aatgtcacta
    20401 cttttttatt tgttttcaca aaagaatcat ttattatgct gctgtttgaa ttgtaatgat
    20461 tagtgttttt taagggggta ttgtttttat aagaacttac taaaatattg ttgttaacaa
    20521 tcataataat tataaacctg tatgatgtct catacaggtt taagtactgt gaaaatattt
    20581 ttttgctatc aaactagcac aaagtatttt ctgcttttct taatgtgata ccacgttttg
    20641 agtcacgtat aaattgaaca aactttttga cgtattcgtc ttgttcaaca ttttgttcta
    20701 tcacatcaca ggcttttgta atagtatatt cacctgactt gagtattttc aatgcttctt
    20761 tgaggtgagc tcttacatca gcatcaatgc ctcttctttt aaggccgatt gagtttattc
    20821 cgtgaggaat cggcggtctg ccttcacctt ttacataagg caaacagtcc attcttgctg
    20881 cggaaaatcc gcttatgata cacatttcac cgattcttac attctggtgg aatacgctca
    20941 tacctcctaa gaatgcgcct ttaccaacat ggcaatgtcc gccgagtgtt gcaaggtttg
    21001 ccatgataac ttcatcctcg agcacacagt tatgtgctac atgggttgat gtcataagca
    21061 tacatctgtc gccaacaatg gttgcatcgc cttcagttgc cgctctgttc actgttgcat
    21121 attctttaat gatacagttt ttaccaataa tggattttgt atcccaaatc ctgtggcgct
    21181 gtaccgatgc tagcaaaagg tgatatcaat gttccgtcac caatttcgca gtattccaaa
    21241 tatgcgttag gcataatagt tacgttgtca cctattttta caccgtttcc gattattgca
    21301 ttggctccta ttgtaacgtt tttacctatt tgtgcatcat cagcaattat tgctctgtta
    21361 tctatcattt ttaactccta aactacagaa aatatcatat ctgccgacat tgcaagttgt
    21421 ccgtcgacca ttgctttgcc ctgagctttg ataataggtc ctttaacttt tgtaagttct
    21481 acttccatgt ccagtctgtc accagggcgt acaattcttt taaatctgca attgtctatg
    21541 cctgcataaa caacaagttt gcctttgtat tcaggaacag tcatcaaaat tcctgcacca
    21601 agctgtgcaa gagcttctgc ttgcaacaca cccggcataa tcggattgtt agggaagtgc
    21661 ccctggaaga aaggttcatt aaatgtaagg tttttatatc ctttagaata ttttccggga
    21721 acgcattctg ttattctgtc tacaagtaag aaaggataac ggtgcggaat catttccata
    21781 atttgcataa catcaaactg caaagtttgc tctgtagtat tttgttcagt catttatagc
    21841 tcctcttcaa ttctataact aattttcttt ttgtatttta tcttttaata tttttgctac
    21901 cttcacatgc actgcatgtc cggcttcttt aacgattact tcagctttta agtccatagg
    21961 gttaaagccc gttaaataga aatcgccgat aaggtcaagt attttgtgct ttgcaggttc
    22021 aaaatcactt ttgagctctg ttgtatagcc gtcttcagta agacctacag tgttttcgat
    22081 gcttactcct cttgcataac ctgctgcttg aagcatttca agctctttta aataaccaaa
    22141 ggttcttgct tcaattattt cgttcaattt gtctttgtct aaagaaaccc atctgtgatt
    22201 caattccgga tggttaaagt ttactgaata cgtaacttta aactcatctg acggcattac
    22261 aacaatatgt gtttttccat tgaagtatga aacaggctct gaaagtatgt aactttcttg
    22321 agctctgttg ccggcttctt taaaaatttc tacccactct gcagaaccgc cgccaaggat
    22381 aggcatttca aaatgtgaaa gatatacgtc aatagcttct atatgacaaa ttgcacacgc
    22441 tgccataaaa tgctcaataa gcattacttt tatatcctgg tttccgatta ctgtgcaatg
    22501 ctctgttgat actacgttat caacatgagc ttcaactgtt ttgtctccaa gatgaaaacg
    22561 aatccctttt ttgtcagaag gcacaagcct tgctgtagaa tccatgcctg tcatcaagcc
    22621 ttttgatgtg actgtagctt cttttgcaat agtgttgagt gcggtcatat tcattactgc
    22681 tctccctgtt caaatgattc aagaagatgt tcatattttt tgaatttagc aacagcttct
    22741 tctgctgatt tcaacatctt taactgtttg ataaagtctt ttctcggaac agcaggagca
    22801 ccgataataa tcgatttatc agggaatgat ttagttacac ctgctttagc catgatgatt
    22861 gaatcagagc ctatttcaag gtggtctgcc aaacctgcct gacctgcaat aaccactctg
    22921 tctccaattt tacagcttcc agcaagacca acttgagaaa ccagcataca agcttctcca
    22981 actttacagt tgtgtcctac ctgtacaagg ttgtcaattt ttgtttgtgc gccaataacg
    23041 gtgttttcaa tggtgcctct gtcaatacaa gtatttgcgc ctatttcaac gtcatctttt
    23101 attacaacac cgccaattga agggattttg taaacttttt gttttgtatt tgcttcttta
    23161 acagcgcctt cttttcttgc ctgctcaata acatcagggt tttctgtaac aaagctgaat
    23221 ccgtctgcac ctatgcttac accgtgttgt aagattactc tgtttccaat ttgtgaacaa
    23281 tcaccgatat ttacgccggg atggaaaaga cagttttcac cgatagtaca atttttgcca
    23341 atatatatgt ttgcaagaag ctttgtattg ttacctacaa caacatttct tgaaataaca
    23401 acattcgggc ctattgatac attttcgccg atttttgctt ccggatgaat taccgcactc
    23461 gggtggattc ctataggggc atcaggagca tcatagaaca ggtggagaag tttcatcatt
    23521 gctaatcttg gtctttccac ctcaatagtt gaaatatgtt caaaatttac acccagagga
    23581 acaagagctg cttttgcttt tgtttttgca aggttttcta tttcttcttc agacaaagcc
    23641 agtgcaagtg aattttcatc agcaagaaga ggcggtctca atttgtcaat tgacgcatct
    23701 gctactttag aaaggatgcc gcctactatt tctgaaattt cctctattct gtaatttttc
    23761 atatctggta attctcactc cttaaaaatc tgtattgtct tgtattttgt tattttaata
    23821 ctatcacagc caaattacaa aatatttaat attattttaa tatgcgtaat aatgtaaaat
    23881 ttttgtaaca atttaagagt atatacgcaa tttttaaaaa gtatatacct ttatatatac
    23941 ataggataca aaaaggagaa ccaaaatggc aatcaatcca gcaggcgatg ctcaaaataa
    24001 cagaggcggt aacggtcaat tcagacccct cttgagaaaa gctcaaagcc agaacaaact
    24061 gcaagccagc ctggctatcc ttgataaaaa agatatcaga atgagattca aaaattcaag
    24121 agaccctctt tatatagctt ttgattatat tgacaaaaga cctgtacagg agttggcagt
    24181 tgaatttgta aaagattctt tattcgacat tgtaaatttc atttcaggtg gtaacagata
    24241 ataggtaaaa agatataatc gattaactaa tgttaaagat tagtcataaa cagcatttat
    24301 tgtaaaatat taatatgctg aaaaaaatta tactgatatt tttcatattc atattaaacc
    24361 tgttcagcct tgtacaagcc gaagaagcat taaaaattaa ctctataaat tttgataatt
    24421 cggataatat tatttttctg ggctcttcat ccaaggttat gtacatcaat gtcaaatcga
    24481 tgaaattgtc caatccggac aggatatctt ttgacataga caatgctgtt ttaacaaagc
    24541 caaattccag ctggactttt aaaaacagtg atataaaaca ggttaaactc tcacagttta
    24601 caacagaccc ggatgttgta agaatggtta ttacctatga taaaggcttt aatgtaaaca
    24661 agttaaagct gtacagaata gataataacc ttgtgtttgt ctataacaaa aaattgtttg
    24721 cacaaagcaa tcttcgttct gtttacagcg atgaaaaatc aaaacaaaac tattatgaat
    24781 acacattaat ttctcaagat gtaaaaacat cagctgcagc agctgataca tcaaactatg
    24841 tgcgctcacc cgaggctgta gagatacaaa aagcgtttaa ctccaagggt gaacttgtca
    24901 aaaaagaccc tgtgcaaatt actgtatcaa aaccgcatga acaaaagctc aaatcaaatt
    24961 tccatgtaaa caaaatcgat gtaaaaagag gaaatgccct gataagaggt attggctcta
    25021 ttgctgttga aaatcctttc attgttgcaa atcctacaag acttgttttt gatatgccaa
    25081 atacctatgt tgctccggaa attagaaata aggagtatgt gctttctgaa aaagaaacaa
    25141 ttaaaatagg ccagtttgag ccaacaaaag caagaatagt tgtaacannt tccgtcctat
    25201 ttattcttat gattcacaga gtatttttct ggcacacgat gacagaattc ttggtatgaa
    25261 gctttatgac agaacctcgt ccacttattc ttatgctgca aaaaaaatga atgatacaac
    25321 agatgttctg caattcgttt ttacagaacc gattattcat tcaattaaaa agttttctaa
    25381 caaagtagaa ataaatttat acaattcctc aggttttgac catgctgcat accggagaaa
    25441 cctcaattcc gatgttttgt caaaattgag aaccgaagct ttgcctgggt gcggtattaa
    25501 ggttattata ccaatacaaa aaacaacgga attggattat caacagagtt ttgataacaa
    25561 gcaattaagg cttacaattg ttacaccaaa agaagaaacg ataaaacaat caaaacctgc
    25621 tcctgcaatc attgcaagaa atcccaatgt aaaaacaatt gtaatagatg ccggccacgg
    25681 cggcagcgat gtaggtgcaa caagagaggg catttatgaa aaggatatta ctcttgatat
    25741 gtccaaacgc cttgctgcaa tattaaagaa aaaagggttt aatgttttga tggttcgctc
    25801 gtcggatgag tatgtttcat tgcaggacag agtgacattt acagaagaaa acaaaggtga
    25861 tttgtttgtc agcatacacg taaactccag cgttacacct gaaggaaacg gtcttgaaac
    25921 tcactattat acacctcaat catatgagtt tgcacaaatt gtgcacaaag agtttgcagc
    25981 tgctatagac tctaaggaca gaggattgtt taagtctaaa ttttatgtta ttaatcatac
    26041 tacctgcccg tcaattcttg tcgaaacagg atttatctct aaccctgaag agagaaaagc
    26101 acttatgacg gcagaacgta aacaaaaaac agccgaggca gttgccaagg gtatattgaa
    26161 atatttaggt aaagattaaa tggaaatttc tgaaaaagat aaagcaattg gcgtgatgga
    26221 ttccggtgta ggcggtttga ctgttctcaa acagctttta aatgttatgc catcagagaa
    26281 ttatctctat tttggtgata caaaaaatct cccgtacgga gaaaaaacaa aagaacagct
    26341 cattgaaata gttaaagaaa tttttgcttt ttttgaaaaa caaaatgtta aagctgttgt
    26401 tcttgcttgt aatactacat ctgctacggc ttatgaagaa ttaaaggaca aatacagctt
    26461 taaaatttat cctttgattc aaactgtttc aaaatgtgtt gttcttgata aaagccttga
    26521 tagaattggg gtaatggcaa ctcaagcaac tgtaaattcc caaaaatata catctgaatt
    26581 aaagaagaat aatccggctg tagaagtgtt tgagcaggca tgtccaatgt gggtgcctat
    26641 agtggaaaac caaattaagg attatgatga aaaaacagtg ataacgggat atttgaacag
    26701 tgtccttgat tttaatccta aaaagataat tcttggttgt acacattatc cttatctgct
    26761 ggacaagctt gtaaaatatg caccggaaga tttatttata aatccggctc aactttttgc
    26821 aaactatata aaacaggatt gnnnnnnnnn nnnnnnnnnn nnngttctgt ttcttatttt
    26881 gcaagcagtg ggcctgatgt tttcaaaaaa aatgcaaagc tttttcttga aattgattct
    26941 gtaccacaat tggttgaatt ataaatattt gttacataaa agcaataatt gagaagagaa
    27001 tgactttata tatatgaaag ctccttcttc ttatttaaat tttcaggccc ccaatggggt
    27061 ctttttttta ttcacgcata gttgattcaa ggtgatttaa tacatcctgc ggcgtaatgt
    27121 tgtgcatagc cataaacgtg agcataaaat acgttaaatc cgcagcttct ttgcccagtc
    27181 cgtctttgtt ttcaaaattt accgtttcaa acgcttcatt cattatttta nntgaaataa
    27241 ccttgttgtc agcgcattgt caggtaacag cgattttctt gtaaccaaaa atttatataa
    27301 ttcgtttatt gaaaaatctt tgtttccaaa gcaagaatat ctgcccaaat gacaggcatt
    27361 acctttttga ttcaccataa ataaaacagc atctctgtca cagttgaatc ttgcttcaat
    27421 aagctcttgc gtattgccgg atgtttctcc tttagtaaaa attttgtttt cgctgcggtt
    27481 aaaatatatc cctttgcctg ttttgagcgc ttgcaaaagc gattgtgaag tggaataagc
    27541 aagcgacaag acctgtttag ttgcataatc ctgaacaatt gtcggaatgt agccgaatct
    27601 tttttcaaaa tccatgcatt ttacaaatgc ttcttcaagt tttacaacac ctgtgtaaat
    27661 gcacatacca agctgtgtgt gtactcccat tttttggagc tttacgattt catcaacaga
    27721 acaaataccg cctgcggcta tcagctcttt tgttgttgca gcgcgtatta gttttatgga
    27781 gtcaatgtca gcaccttgca tcattccttc attttcaatg actgtatata aaaatccaga
    27841 gcaaaggttg ttaaaccgtt taacaaagtc taacggctct gctgatgttg tttttgtcca
    27901 gccgtgtgtt gcaatatatc cgtctttaga atcaatagca atcagcactt tttctttagg
    27961 aagctttgat aataactctt cgtttgcagc tgtgcctata atgatttttt ttgcacccca
    28021 ggatagaaac ttttgtgctt tctttgcatc ccttattcct ccgcctactc tgcaaggagc
    28081 aactttgcat aatttttcta taagtgtttc attgtttccg tttccaacag ctgcatcgat
    28141 gtcaattacg gcaacttcgc caaacctgcc gtaatatttt gcaagttcaa taacgtcttc
    28201 tctttcaaga actttttcca taccctgacg aagttgaacg gctttgccgt ccatcaaatc
    28261 aattgttggt attaacattt tagagaccct ttatttgcta tttttcaatt tcagctagaa
    28321 gctcgttata aacgtcaatt gtgatatggc agattgcaag acgtctgtcc acaagacttt
    28381 ttattgtagc ttcaaagcat ttaaacattg ccttattaag tccgttatcc tcttttaaaa
    28441 gctccagaca ctgatttctg aattcttctt cacgcgttct tgcttcaatt ttatctgcaa
    28501 gaaaaattat tttttcaaag tcactcatac cgcagcggcc aagagtgtgc catcttattg
    28561 cgtcaagaat ttctttatca tttatcccga acttttcttt tgcaagatac gcacttacag
    28621 gtgcgtgcag tgttttataa ttcaacaatt cgcaatcctg tacttccggt atatgttcgt
    28681 ggattatttc aagaagtttt tcgttggaaa aacattttgc tgcatcatgt aaaagccctg
    28741 tgattctggc tttttcaaca tccatattga acatctgtgc cagctcaact gctgcttcca
    28801 tcacacctat agagtgaatg tatctttctt catataaatt ctctttgagc caattttgaa
    28861 tttcttctat tttattttct gtataagcca tatttatcaa tgtatttttc cacttctgcc
    28921 ggaacaagtt tttgtatggg cacgctgtta tatatatttt ctcttatcct tgttgatgaa
    28981 atatccataa atggaagctt catcattttg taattatatc ctttttctct aaggttgtgc
    29041 aaatatgttg catctgcttc aagctctttt tcgccttctc ttgcaaagag tataaaatcc
    29101 agcatatttt ttagtttatc agactcatac caggattcta tttttttgaa agcatctgtg
    29161 ccaatgataa aatttatttt accttcaatg tcatattttt cgtaaagctc ttttactgtc
    29221 aaataggtgt aagacaaacc gtctcttaaa tattcaatat cagagacttc aagatactct
    29281 ttgtccaaaa cagccagctg tgccattttt aatctatgat aagagagggt ttcatccact
    29341 tttttgtgcg gcgggttggc tgctggtatg acaagtattt tatcaaaatg aaatttttct
    29401 tttgcatact cacatatttt taaatgcgca ttgtgaatag anntgtccct tgaaacaagc
    29461 ataatttcat agccaaggcc tttcttgcta gtttagcgca aagtttttac agtgaatttc
    29521 ttcaacaagt gcgagtattt tgttaataaa ttttttgtat gcagctctgt cagcttcgcc
    29581 ggaaaggatt atgtcagctt gcattgctgt cgggtggata tggatttttg cttttgaaga
    29641 tgcattttca tatacttcat cagcagaatc tccgaggtct ctttcctgtg cacgcttata
    29701 gaatctttct ttttgtacgt tatgagaaac atctacgtaa attttgaaat caaatgcgtc
    29761 cacaactttt tctgtaaggg tgaacaagcc ttcggaaata attattttag aaggttctgc
    29821 ttttgtaacg ttgtcttttc ttattgcagt gcctgacata tcgtattttg gaagataaac
    29881 agtatctccg aaaagcagct gtttgatatg ttttttcatc agctccagct caagtgcttc
    29941 gggtacatca aggtcatagt gttttgcaaa ttccgcaaaa cttcctgctt ttttgaccat
    30001 atctgaacgg tcatagtaat aatcatcggt atttaatctt gttattacgt tttcaataca
    30061 atattcatca gcgaatgact gaatcgtatt gatgatatca taggcaattg tggattttcc
    30121 gctggctgtt tcaccggcaa tgcctattga gcaggctctt gtaatatttc ccgataaaaa
    30181 caaagccatc ttatagacgg cattattact cactttttta aatatagaat ctgatgaatt
    30241 aacttcatca aagaagattt tgttaagtct tttttcaaca tactgaagaa gaattttgtc
    30301 agcggctttg ttaaaaggga aagagctcaa agcctgtttt tgctttggtg cagatataaa
    30361 atcctgtgtg accgtatttt gcaattttgt gttccttttg ttgtcttgcc taaaataaaa
    30421 accgaacaaa aaattttttg ccggtttttt tatttagttc aaagtttctt aacaatatta
    30481 tttttttcat caaccataac aatcgcggga ttgaattggg ccttttcttc cagcgtcatc
    30541 atcg
//
LOCUS       DABS01000164           14949 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_143, whole genome shotgun sequence.
ACCESSION   DABS01000164 DABS01000000
VERSION     DABS01000164.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 14949)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 14949)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14949
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..1077
                     /locus_tag="CPT85_07515"
     CDS             <1..1077
                     /locus_tag="CPT85_07515"
                     /inference="COORDINATES: protein motif:HMM:TIGR00479"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="DAB21722.1"
                     /translation="QETVKKITGLDIEVKPVLPSPKTREFRSKVQYPVSQTKVSKRLL
                     AGYYKRGSHELVNIKYCPIQPKIIDKITEFIRNKAQELGISGYNENIKKGFKGELRHI
                     VYRFSKSKNECIIIFVVNDTKLSEKFKNLAKKVMAEFAHVKGCLINYNTTNSNLILSG
                     DTRKIQGENHVIEEIDGKVFKISANSFFQVNIGSAENIFNTVKEIIQTNYPSSRILDA
                     YSGVSSFGIWLSDIAKEVVSVEEAPSATKDAADNVKLNNVTNLTALNGDAKKIFEQLV
                     EKGEKFDVTVLDPPRKGCEKESLDYAIKLSEKAIVYVSCNPSTLARDLKYLHENRFTT
                     RYIQPVDMFCHSYHIESVAWLEKN"
     gene            1110..1883
                     /locus_tag="CPT85_07520"
     CDS             1110..1883
                     /locus_tag="CPT85_07520"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21723.1"
                     /translation="MEIPKKLLTNMPFFNVQKVDKPVKALFKQISDKDDRLLFAPLKL
                     KHEELGDMYVSVHKHERAWNRHELDIEDRSGYVLGKEIFSIDEGNKKMFGFDIFVDPY
                     YRKKKLAELLRLFSIMIMNENKSPRLKIYSKNTAVYFHSKYKFEPQIWQFMDRDKALE
                     SIAENEAKEFIEMSRFAKNIQDRVRFFREDGAKQRELCEETQELMQDYINLAMQKQSP
                     EKNYPLKWGMDMVLTKEKVESNKEFYNPLFERHGLDYRL"
     gene            1880..2617
                     /locus_tag="CPT85_07525"
     CDS             1880..2617
                     /locus_tag="CPT85_07525"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21724.1"
                     /translation="MINRIISFKQLPVRICDNKKLPKKYTVCIENNTDVFVRNYNNPH
                     GNNFVASVDTKKLSNMAKNRFGINLDNKTLENGLMSVTNEKNKGKGLGVVMHLNNVIN
                     LLENDLERIELKALPTAVLFHGKMKFEPNLYDYESILETMLAISQKDCTKFPDLKQVV
                     EDAGNYFDEAFESRGLKHTKEKIKEANSIVIRYIEIMSTKKLEPQDKVDYAFKNVLDM
                     YLTKEKILENKDFFNALFKKFNIDYKI"
     gene            complement(2614..3891)
                     /locus_tag="CPT85_07530"
     CDS             complement(2614..3891)
                     /locus_tag="CPT85_07530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006279086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="DAB21725.1"
                     /translation="MTLAQEINYDVKDMALAEQGKNNIEWAMKDMPVLERIKARFKKE
                     QPFKGLRLTACVHVTKETAALCIAMKEGGADAVLAASNPLSTQDDVAAALVKYWGIPV
                     YGYAGESSETYAKHVQQVLDHKPNIVIDDGCDLVATIHSKRQDLIPDIIGTTEETTTG
                     IIRLQAMEADGSLKFPTVGVNNSLTKHLYDNRYGTGQSAIDGIIRATNILLAGKTFVV
                     CGYGWCGKGAAMRAKGLGANVIVTEVDPLKALEAAMEGYSVMPIAEAAKQGDIFLSIT
                     GDKNVVDVHHMLTMKDGAFVCNAGHFDVEVNVNGLKKETVEINQIRPSLEEYKLKNGK
                     SIYVLAEGRLVNLVAAEGHPASVMDMSFANQALGIEYIVKNKGKLENKMYTLPHEVDV
                     EIAKIKLDSMGIQIDTLTPEQEEYLHSWNSGTV"
     gene            3981..4430
                     /locus_tag="CPT85_07535"
     CDS             3981..4430
                     /locus_tag="CPT85_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012636504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="DAB21726.1"
                     /translation="MGKKVITTNKKAFHDFLILEKYNAGIVLTGTEIKSIRKGAINLK
                     DSFAKIEDGEVWLYNAHINPYEQGNRFNHEAERRRKLLLNKNEILKMLGKVKKEKYTI
                     IPLSVYLENGWAKAEIALAKGKQLHDKRESIAQKTVDREIARSIKIR"
     gene            complement(4512..5441)
                     /gene="flgL"
                     /locus_tag="CPT85_07540"
     CDS             complement(4512..5441)
                     /gene="flgL"
                     /locus_tag="CPT85_07540"
                     /inference="COORDINATES: protein motif:HMM:TIGR02550"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein 3"
                     /protein_id="DAB21727.1"
                     /translation="MRVTSTSIQNMVGNISSQQSQLYELYNKINSGQKYTNISDNPID
                     AADIVRLNKQLSEIGAYSRNVQNATTQINAQDEAFSTIVDKLQRINDLAIQAANSASG
                     EDGFKACKAEIEELKKTIVNLANTQYDGKYIFAGTNVTTKPFELADDGTITYHGTPAN
                     NTAGYERYLEISDGVKVELNSSGDSIFGTYDPNDPNNSSGLFKVLGDLEAALNTDPMD
                     NDAVREQLDPLQASIKHISEIQSVHSSTVTKLTMTTEMLDSTEINLKSKLAAISEVDL
                     PSAITELVQQNYSLQASMQAYTIISNQSLLDYI"
     gene            complement(5463..7013)
                     /gene="flgK"
                     /locus_tag="CPT85_07545"
     CDS             complement(5463..7013)
                     /gene="flgK"
                     /locus_tag="CPT85_07545"
                     /inference="COORDINATES: protein motif:HMM:TIGR02492"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="DAB21728.1"
                     /translation="MGSTLNGLMNIAQQSIYNNQVALNVISNNIANMNTKGYTRQQVE
                     FAAIPGYRIFDWCANNGKVTPGQGAEITGITNRRSEWLDNYYRGQNSANGYYDQIGGM
                     LDNMENLLNDELSANGLQKRFSDFFAASQALSGDPTNNAYKIAFLNAAQDVADMLNNM
                     SNTVNEYMNQAVGTVGDPDSFESSLIKTNVDSLDSKLSQLAELNNQIAQNPNSNALKD
                     QRDMLLDDISSMIPLTTTTNENGTVNVIIDGQTVVKGGEKRLTIEAVQGDDPNHPVKI
                     QLKDSEGNIKNDDISDTLGNCSLSAILQAGSGDSFGYKTLLNDLDKLASAFAQEMNRI
                     QTQADANGTPMYIGPDGTLVESTTPLFVTKDGTGNFTAGNIQINQAVIDDPTLVATAR
                     MDPTAADFDDKAVGNTGNMDQFNNLAKGKLTGLSISDPPGEGMSITDFISGLVSKIGS
                     GVDALKSAADAQGSVLEQAAAQRDALYGVDLNEELADLIRYQRCYEASARVFSTSNEL
                     MQTILQMI"
     gene            complement(7043..7543)
                     /locus_tag="CPT85_07550"
     CDS             complement(7043..7543)
                     /locus_tag="CPT85_07550"
                     /inference="COORDINATES: protein motif:HMM:PF05130.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlgN"
                     /protein_id="DAB21729.1"
                     /translation="MIKEQIQQLETIIDKEIDGYKNIEKLYADKKELLVHGKASELFD
                     VDAKIQNLYKNISNLSDARKNVTKAMEIPTFSLTDIINKIKDKDEESAKKLESKKEEV
                     KQLAQRIFELEKVNMELLKHGMHVTNKTLEIIIKGLKPITNEYNGKGENITKNQLEMS
                     SIVEEA"
     gene            complement(7579..7863)
                     /locus_tag="CPT85_07555"
     CDS             complement(7579..7863)
                     /locus_tag="CPT85_07555"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21730.1"
                     /translation="MVGNIGSSKVSAIQLLNAANAFKNTKVQTPIEQQQIKEPQTSNG
                     TDINDDSILKSQNVDEIKKFAQMAGENDLSEDDIKYGLSYGRSVIVEYLA"
     gene            complement(7869..8291)
                     /locus_tag="CPT85_07560"
     CDS             complement(7869..8291)
                     /locus_tag="CPT85_07560"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21731.1"
                     /translation="MSYQSIQAQALSSDIVNTNVQTLDNIKRIKSQKEQLKKVSKEFE
                     AIFVTKMISALHKTVDKEGGIFGSDDKYMDKFKSFIFDEVGRQIANNPNSTVGFAKQI
                     YTQMEKALPKEETEIQETAKQAAAAQGLKHYRELNKEI"
     gene            complement(8293..9402)
                     /gene="flgI"
                     /locus_tag="CPT85_07565"
     CDS             complement(8293..9402)
                     /gene="flgI"
                     /locus_tag="CPT85_07565"
                     /inference="COORDINATES: protein motif:HMM:PRK05303.1"
                     /note="part of the basal body which consists of four rings
                     L, P, S, and M mounted on a central rod; Bradyrhizobium
                     has one thick flagellum and several thin flagella; the
                     Bradyrhizobium protein in this cluster is associated with
                     the thin flagella; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlgA"
                     /protein_id="DAB21732.1"
                     /translation="MKRILKLILVITMITGMVTTDAMSTMVRIKDIAHVKGVRNNQLV
                     GYGVVVGLPGTGDNSRSTQITNQMLLQNLGTVIEQSNYIQKGSSAAVLVTATVPPFAK
                     NGDQIDLTVSTMADAKSLEGGVLVQTQLRAPNGEIVAIGQGPVSVGGISKDSNGSSTR
                     TAITTTGRIPRGGIVERDINTQIGDENTLTLILDKSDYTMATRVASAISKNVTAAKAV
                     DGGSIRVAIPAKFNDDRISFLSILENMTIDAARDKARVVVNERTGTVVIGSEVKLLPA
                     AVAHGNITVTVQTTNQVSQPEPFAGGTTTAFANSAVSVNKGGGSLVTMPANSTLNDLV
                     RALNAIGVAPIDLISIMQALREAGSLQXQAEIQVI"
     assembly_gap    8318..8319
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(9432..10106)
                     /locus_tag="CPT85_07570"
     CDS             complement(9432..10106)
                     /locus_tag="CPT85_07570"
                     /inference="COORDINATES: protein motif:HMM:PF02107.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21733.1"
                     /translation="MGRDKIKMAKINKKNYRKVLIMLTALLMIAQGAQMQSANAESLF
                     VLGTSQSFYSEPKSLFGGVRARSVGDIVTIVLSENISFNDSLNYTSDRSSNTVDNFTN
                     FINKILPGTPLNNQFNNFGGSNSVDSTTSNQRSVGINDSVTVQVVQMLPNGNLMVQGK
                     KTLVNGAERVDLLVSGVVDPRFIDQKGQVYSKNVANFQFALAGKGAVSRAGNEGIINR
                     AVKYLF"
     gene            complement(10248..10964)
                     /gene="flgA"
                     /locus_tag="CPT85_07575"
     CDS             complement(10248..10964)
                     /gene="flgA"
                     /locus_tag="CPT85_07575"
                     /inference="COORDINATES: protein motif:HMM:PF13144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella basal body P-ring formation protein
                     FlgA"
                     /protein_id="DAB21734.1"
                     /translation="MKKLIKTLLIITIFSGMAAQCFAQTLSADQFKALVSAQAKKDLQ
                     KFNLDDCEVTVGHLPVQSFTVPDGKVTVEIVSNGYQSLTPKEFKKVNIYVNKNYARTY
                     YVPLETKAYKHVAVAKEVIQRDKIIPLQSVEFKRMDIMGNLNNTVSLEDISRELVATK
                     AFFPGNMILKRYTMSKPDIVKNAMVTVNFRTGNALNIAVEGIALMQGNKGDTIQVKNK
                     RFNKIYTGEVTGVNQVLVQI"
     gene            complement(10987..11771)
                     /gene="flgG"
                     /locus_tag="CPT85_07580"
                     /pseudo
     CDS             complement(10987..11771)
                     /gene="flgG"
                     /locus_tag="CPT85_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017889550.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
     assembly_gap    11722..11730
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(11805..13214)
                     /locus_tag="CPT85_07585"
                     /pseudo
     CDS             complement(11805..13214)
                     /locus_tag="CPT85_07585"
                     /inference="COORDINATES: protein motif:HMM:PF06429.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017417458.1"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    12618..12639
                     /estimated_length=22
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    13235..13236
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(13452..14822)
                     /gene="accC"
                     /locus_tag="CPT85_07590"
     CDS             complement(13452..14822)
                     /gene="accC"
                     /locus_tag="CPT85_07590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018249950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="DAB21735.1"
                     /translation="MIKKVLIANRGEIAVRIIRACKELGIKTVAVYSQADADSLHVSL
                     ADEAYCIGPAQSAKSYLNIPAIISVALTSGADAIHPGYGFMSERADFVDICTDHGIKF
                     IGPSAEAMRKMGDKATARKTMTANGVPVTPGTDLVDDMDAAKEFAAKAKYPVIVKATA
                     GGGGKGMRIANNAEELEEAITLCQTEAQNAFGNAGVYIEKYIINPRHIEVQIIADSHG
                     NVVHLGERDCSVQRRHQKLLEEAPSPAIDEETRKAMGAAAVTAAKVIGYEGAGTIEFL
                     LDHDGSWYFMEMNTRIQVEHCVTEMVSSVDLLKEQIRVASGEKLSFTQDDIKLRGHAI
                     ECRINAEDADKDFMPCPGEIRGYIAPGGFGVRVDSHSYTGYKIPPYYDSMIGKLICWG
                     VDREDARKRMLRALDEYVITGIKTTIPYHKKILTNEVFISGKFNTGFIPEHMTPKKEE
                     EETAKV"
BASE COUNT         3841 a         2965 c         3074 g         5034 t
ORIGIN      
        1 caagaaactg taaaaaaaat tacaggcctt gatattgaag taaaacccgt attgcccagc
       61 cccaaaactc gtgagtttcg ctcaaaagtc cagtatccgg tttctcaaac aaaggtgtct
      121 aaaaggctgc tcgcagggta ttacaaacgc gggtctcatg agcttgtgaa tatcaaatac
      181 tgcccgattc agcccaaaat tattgacaaa atcaccgagt ttattagaaa caaagcacag
      241 gagcttggaa tttcgggtta caacgaaaac attaaaaaag gctttaaagg cgagcttagg
      301 cacatagttt accgttttag caaatcaaaa aatgaatgca ttataatttt tgttgtaaac
      361 gacacaaaat tgagcgaaaa gtttaaaaac cttgccaaaa aagtcatggc agagtttgcg
      421 catgttaaag gctgtttgat taactacaac accacaaact caaaccttat cctctccggt
      481 gacacaagaa aaattcaggg cgaaaaccat gttattgaag aaattgacgg aaaagttttt
      541 aaaatctccg caaacagttt ctttcaggta aacatagggt cagcagaaaa tatttttaat
      601 acggtaaaag aaattatcca aacaaactat ccgtcttctc gcattttgga tgcatattcc
      661 ggagtatcga gctttggcat atggctgtct gacattgcaa aagaggttgt gtctgtagaa
      721 gaggcaccct ctgccacaaa agacgctgct gataacgtta aactcaacaa tgttacaaac
      781 ctgacagctc taaacggtga tgccaaaaag atatttgaac agcttgttga aaaaggcgaa
      841 aaatttgatg taacggtgct cgacccgcca agaaaagggt gcgaaaaaga atcgctcgat
      901 tacgctataa aacttagcga aaaagctatt gtgtacgttt cgtgcaatcc atcgacatta
      961 gccagagacc ttaaatatct gcatgaaaac agatttacaa ccagatatat tcagccagtt
     1021 gacatgtttt gccattctta tcacatcgag tctgtagcct ggcttgaaaa aaactagcaa
     1081 aaaaattttt tacggttttt attgcatata tggaaattcc taaaaaatta ttaactaaca
     1141 tgcctttttt caatgtgcaa aaggttgata aacctgtcaa agctttgttt aaacaaattt
     1201 ccgataaaga tgacaggctg ctttttgcac cgttgaaact taaacatgaa gagcttggcg
     1261 atatgtatgt gagtgtgcac aagcatgaaa gagcctggaa tcgtcatgag ctggatattg
     1321 aagacagaag tggctatgtg cttggcaagg aaattttttc gattgatgag ggcaacaaaa
     1381 aaatgtttgg ttttgatatt tttgtagatc cttattatag aaaaaagaag ctggcagagc
     1441 ttttgcggct ttttagtatc atgattatga atgaaaataa aagtcccaga ctaaaaatct
     1501 actccaaaaa cactgctgtt tatttccatt ccaaatacaa gtttgaaccg caaatctggc
     1561 agtttatgga tagggacaaa gctcttgaaa gcattgccga aaacgaagca aaagagttta
     1621 tagaaatgtc gcgttttgca aaaaatattc aggatcgtgt cagatttttc agagaagacg
     1681 gtgcaaaaca aagagagctc tgtgaggaaa cacaggaact tatgcaagat tatattaacc
     1741 ttgccatgca aaaacaaagc cctgaaaaaa actatcctct aaaatggggg atggacatgg
     1801 ttttaacaaa agagaaagta gagtcaaaca aggaatttta caacccgctg tttgaacgcc
     1861 acggattgga ttaccggtta tgataaatcg cataatctcc tttaaacagc tgcctgtgag
     1921 gatttgtgat aacaaaaagt taccaaaaaa atacacagtt tgcatagaaa acaatacaga
     1981 tgtttttgtg aggaactaca ataatcctca tggaaacaat tttgttgctt ctgttgatac
     2041 aaaaaaattg tctaacatgg caaaaaaccg ttttggcata aaccttgata ataaaactct
     2101 ggaaaacgga cttatgtctg taacaaatga aaaaaataaa ggcaaggggc tcggcgttgt
     2161 aatgcatttg aacaatgtga taaacctatt ggaaaatgac cttgaaagaa tagagctaaa
     2221 agccttgccg actgcagtgt tattccatgg caaaatgaaa tttgaaccta atttgtatga
     2281 ttacgagtca atccttgaga caatgcttgc tatttctcaa aaagattgca caaaatttcc
     2341 tgaccttaaa caagtggttg aagatgccgg aaattatttt gatgaagcat tcgaatcccg
     2401 cgggctcaaa catacaaaag aaaaaatcaa agaagcaaat tcgattgtca tacgttatat
     2461 tgaaataatg agtacaaaaa agcttgagcc tcaagacaaa gttgattatg ctttcaaaaa
     2521 cgttttagac atgtacctta caaaagaaaa aatcctcgag aacaaggatt ttttcaatgc
     2581 tttatttaaa aaattcaata tagattacaa aatctaaact gtacctgaat tccagctgtg
     2641 aaggtattct tcctgttccg gtgtaagagt atcgatttgt atacccatgg aatctaattt
     2701 gatttttgca atttcaacat caacttcgtg cggaagtgtg tacattttgt tttcgagttt
     2761 tcctttgttt ttaacaatat attcaatacc aagggcctga tttgcaaaac tcatgtccat
     2821 aacagaagcg gggtggcctt ctgcagctac aaggtttacc agtctgcctt cagcaagcac
     2881 gtatattgat tttccgtttt tcagtttgta ttcttccaaa gaaggtctta tctggttgat
     2941 ttctactgtt tccttcttca atccgttaac attgacttct acatcaaaat gaccggcgtt
     3001 gcaaacaaag gcaccgtctt tcattgtgag catgtggtgc acatccacaa cgtttttgtc
     3061 gcctgtgata gaaaggaaaa tatcgccttg ttttgcggct tctgcaatag gcattacact
     3121 gtagccttcc attgcagctt cgagtgcttt aagagggtca acttcagtaa ctataacatt
     3181 ggcacccagt ccttttgctc tcattgcagc gccttttccg caccagccat aaccgcacac
     3241 aacaaaagtt ttgcctgcaa gcagaatgtt tgttgcacgg atgataccgt caatagcact
     3301 ctggcctgtg ccgtatctgt tatcgtaaag gtgttttgta aggctgttgt ttacgcctac
     3361 agtcgggaat tttaagcttc cgtccgcttc cattgcctga agacggataa tgcctgttgt
     3421 tgtttcttct gttgtaccga tgatatcagg aatcaagtcc tgtctttttg aatggattgt
     3481 ggcaacaagg tcgcatccgt catcaattac aatattgggc ttgtgatcaa gcacctgttg
     3541 tacgtgtttt gcataagttt ctgatgattc tccggcatag ccgtatacag ggatgcccca
     3601 gtattttacc agtgctgccg caacgtcatc ttgtgtagag agcggattgg atgctgcaag
     3661 cactgcgtct gctccgcctt ctttcattgc aatgcaaagt gctgctgttt ctttggttac
     3721 atgcacgcac gctgtcagtc ttaagccttt gaagggctgc tcttttttga atcttgcttt
     3781 aattctttcg agaacaggca tgtctttcat tgcccattct atattatttt tgccctgttc
     3841 tgccagagcc atatctttta cgtcatagtt gatttcttgc gctaatgtca tttgtctctc
     3901 cttttgattc agactttata atctcttaaa attgtagcac ggataagata gggggcaaaa
     3961 atttatgtta caatacattt atgggtaaaa aagttatcac tacaaataaa aaagcttttc
     4021 atgatttttt gattctggaa aaatataacg cagggattgt gttaacaggt acagagataa
     4081 aatcaataag aaaaggtgca ataaatctaa aagacagctt tgccaagatt gaagacggcg
     4141 aggtctggct ttacaacgcc catataaacc cttatgaaca gggcaacagg tttaaccacg
     4201 aagcagaacg cagaagaaag ctgctcttaa acaaaaacga aatccttaaa atgctcggca
     4261 aagtaaaaaa agaaaagtat acaatcattc ccctgagcgt gtatcttgaa aacggctggg
     4321 ccaaggcaga gattgcactg gccaaaggta aacagctgca tgacaaacga gaatcaattg
     4381 ctcaaaagac agtagatcga gaaattgcac gcagcataaa aatcagataa aaaaaagggc
     4441 aaaactattg tatatcccta gtaacgcccg taaattaaat aatggtaaga ttaaaactgt
     4501 tttgtcgttt tttagatata atccaacaac gactggttag atattatggt gtaagcctgc
     4561 atggaggctt gaagcgaata attttgctgc acaagctctg ttattgcaga cggaagatca
     4621 acctctgata ttgctgcaag cttagatttc aggttaattt ctgtactgtc tagcatttct
     4681 gttgtcatag tcagttttgt aacagtagag ctgtgtacag attggatttc ggaaatgtgt
     4741 ttgattgaag cttgaagcgg gtcaagctgc tctcttacag catcgttgtc catggggtct
     4801 gtgttgagtg ctgcttccaa atcaccgaga accttaaata aacctgaact gttgttgggg
     4861 tcattagggt cgtatgtacc aaaaatagaa tcacccgagc tgttcaattc tacctttact
     4921 ccgtctgaga tttccagata tctttcataa cctgctgtgt tgttggcagg ggttccgtga
     4981 taagtgattg ttccgtcatc tgcaagctca aatggttttg ttgttacgtt tgtaccggca
     5041 aagatgtatt ttccgtcgta ttgtgtgttt gcaagattaa caattgtttt tttcagctct
     5101 tctatctctg ctttgcaagc tttgaaacca tcttcaccgc tggcagagtt ggcagcctgg
     5161 atagcaaggt cattgattct ttgcagcttg tccacaattg ttgaaaaagc ctcgtcttgc
     5221 gcgttaattt gtgttgtggc gttttgcacg ttacgtgaat atgctcctat ttcagacaac
     5281 tgtttgttga gtcttacaat atcagctgcg tcaatagggt tgtctgatat gtttgtgtat
     5341 ttttgtccgc tgttaatttt gttatacaac tcgtacagct ggctttgctg cgaggatata
     5401 ttgcctacca tgttttgtat tgaagtgctt gttactctca ttgtttttta cctctgtatc
     5461 ggttatatca tttgtaagat tgtttgcata agctcgttag aagtgctgaa cactcttgct
     5521 gatgcttcat agcatctttg gtatctgata aggtctgcga gctcttcgtt aaggtctact
     5581 ccgtaaagag cgtctctttg tgcggctgct tgttccagaa cagagccttg agcatctgca
     5641 gcacttttca atgcatcaac accggagccg atttttgaaa caagaccgga tataaaatct
     5701 gtaatgctca taccttctcc cggcgggtct gaaatactca ggccggttag ttttcctttt
     5761 gcaagattgt taaattgatc catgttgcct gtgttgccca cagctttgtc atcaaagtct
     5821 gctgcagtag ggtccattct tgctgttgca acaagggtgg ggtcatcaat cacagcctga
     5881 tttatctgga tgtttccggc tgtaaaattg cctgttccgt cttttgtcac aaacaaaggt
     5941 gtggttgact ccacaagcgt tccgtcaggg cctatgtaca taggggttcc gtttgcgtct
     6001 gcctgtgttt ggattctgtt catttcttgc gcaaaagcag aggcaagttt atccagatca
     6061 tttaacagtg ttttgtaacc aaaggaatca ccgctgcctg cctgtaatat tgcagacaaa
     6121 gagcagttcc cgagtgtgtc tgaaatatca tcgtttttta tatttccttc gctgtccttg
     6181 agctggattt ttacgggatg attcgggtca tctccttgta ctgcttctat tgtaagacgt
     6241 ttttctccgc cttttacaac agtttgaccg tctatgatta cattgactgt gccgttttcg
     6301 tttgtggttg ttgtgagcgg aatcattgac gaaatatcgt caagaagcat gtctctttga
     6361 tctttcagag cattagaatt aggattttgc gctatctggt tgtttaattc tgcaagctgg
     6421 ctcaattttg aatcgagtga gtcaacattg gttttgataa gagaagactc aaaactgtca
     6481 gggtcgccca ctgtgccgac ggcttgattc atgtattcgt ttacggtgtt tgacatgttg
     6541 tttaacatat cagcaacatc ctgtgcagca ttaaggaagg ctattttata agcgttgttt
     6601 gtggggtctc cgcttagagc ctgtgaagcc gcaaaaaagt cagagaatct tttttgcaaa
     6661 ccgtttgcac ttagctcgtc gtttaagagg ttttccatgt tatcaagcat gccgccaatc
     6721 tggtcataat agccattggc tgagttttgg cctctgtaat aattgtcgag ccattcggat
     6781 cttctgtttg ttattccggt gatttctgca ccttgacccg gtgttacttt accgttgttt
     6841 gcacaccagt cgaaaattct gtatccggga atagctgcaa attcaacctg ctgccttgtg
     6901 taaccttttg tgttcatgtt ggcaatgttg ttgcttatga cattcagtgc aacctgattg
     6961 ttgtagattg actgctgtgc aatattcatt aatccgttta atgttgaacc cattattttt
     7021 tccttttcgg ttataaactt ttttaagctt cttcaactat agatgacatc tcgagttgat
     7081 tttttgtgat attttcgcct ttgccgttgt attcgttggt gattggttta aggcctttta
     7141 tgatgatttc aagagttttg tttgtaacat gcatgccgtg ttttaagagc tccatgttta
     7201 ctttttctag ttcaaaaatc ctttgtgcaa gctgttttac ctcttctttt tttgattcca
     7261 gctttttagc ggattcttca tctttgtctt ttattttgtt gataatatct gttaaagaaa
     7321 atgtcggaat ctccattgct tttgtcacat tttttcttgc atctgacaga ttgctgatgt
     7381 ttttgtaaag gttttgaatc tttgcatcca catcaaaaag ctctgaagct ttgccgtgta
     7441 caagcagttc ttttttgtcg gcatagagtt tttcaatgtt tttgtacccg tcgatttcct
     7501 tatcgatgat ggtttcaagt tgttgtattt gttcttttat cattttgtct cctccgtgag
     7561 gttattaata tttatatctt atgcaaggta ttctactatt acgcttcggc cgtagctcag
     7621 gccgtatttg atatcgtctt ctgacaggtc attttcgcct gccatttgtg cgaatttttt
     7681 tatttcatct acgttttgtg attttaaaat actgtcgtca tttatgtctg ttccgttact
     7741 tgtctgtggt tcttttattt gttgttgttc gattggtgtt tgtacttttg tgtttttaaa
     7801 cgcgtttgct gcatttaaca attggattgc gcttactttt gacgaaccga tattccctac
     7861 catttaatct aaatctcctt gttgagctct ctatagtgtt ttagtccctg tgctgccgct
     7921 gcttgttttg cggtttcttg aatttctgtt tcttcttttg gaagagcttt ttccatctgt
     7981 gtataaatct gttttgcaaa tcctactgtt gagttggggt tgtttgcaat ctgtctgcct
     8041 acttcgtcaa agataaagga tttgaatttg tccatgtact tgtcatcaga gccgaatatg
     8101 ccgccttctt tgtccactgt tttgtgcagt gcggaaatca tttttgtcac aaagatagcc
     8161 tcaaattctt tagaaacctt ttttaactgt tccttttgag atttgatacg tttgatgttg
     8221 tccagtgttt ggacgtttgt attaactatg tcgcttgata aagcctgtgc ctgtattgat
     8281 tggtatgaca tgttaaatta cctgtatctc tgcttgtnnt tgtaaactgc ctgcttctct
     8341 taacgcctgc atgatggaaa ttaaatcaat tggcgcaaca ccgattgcat tgagtgcacg
     8401 aacaaggtcg ttgagcgtgc tgttggccgg cattgtaacg aggcttccgc cgcctttgtt
     8461 aacagatacc gcgctgtttg caaacgctgt tgttgttccg cctgcaaatg gctcgggctg
     8521 cgaaacctga tttgttgttt gtacggttac tgtgatgttt ccgtgtgcta cggcagcggg
     8581 tagaagtttt acttcgcttc ctattacaac cgtgcctgtt ctttcgttta ccactactct
     8641 ggctttgtct cttgctgcgt caattgtcat gttttcaagg atagaaagaa aagagattct
     8701 gtcatcattg aatttggccg gaattgctac tctgatactg cctccatcca cggcttttgc
     8761 agctgtaacg tttttgctta tggcagaggc gactcttgtt gccattgtgt agtctgattt
     8821 atcaaggatt agagtcagag tgttttcatc tccgatttga gtgtttatgt ctctttcaac
     8881 aataccgcct cttgggatac ggcctgttgt agtaattgct gttcttgtgc tggagccgtt
     8941 ggagtctttt gaaataccgc ctacagatac agggccctga ccgattgcaa cgatttcgcc
     9001 gttgggtgct ctcaattgtg tttgaacaag cacaccgcct tcaaggctct ttgcgtctgc
     9061 cattgtagaa actgtaaggt caatctggtc gccgtttttt gcaaacggag gaacagttgc
     9121 tgttaccagt acagcagcag aagaaccttt ctggatgtag tttgactgtt caattaccgt
     9181 accgaggttt tgtaataaca tctggtttgt aatctgtgta gaacgagagt tgtcgcctgt
     9241 accgggaaga cccacaacaa caccgtaacc cacaagctgg ttgtttctta cgcctttgac
     9301 gtgggcaatg tctttgatac gaaccattgt ggacatagcg tctgttgtga ccatgcctgt
     9361 tatcattgtt attacgagta ttaattttaa aattcttttc atttttatgt tttccgtgtt
     9421 tagtgtgtta actagaagag gtatttcact gctctgttta tgataccttc gttgcctgct
     9481 cttgaaacag cgcctttgcc tgcgagtgca aactggaagt tggcaacgtt tttggaataa
     9541 acctgacctt tctggtcgat gaatctcggg tcaacaacgc cgcttacgag caagtccact
     9601 ctctcggcac cgttaacaag ggtctttttg ccctgcacca tgaggtttcc gttaggaagc
     9661 atttgtacaa cctgaactgt tacagagtcg ttgatgccga cgcttctctg gttggaggtt
     9721 gtgctgtcca cgctgtttga accgccaaag ttgttaaact ggttgttcaa aggtgtgccg
     9781 ggaaggattt tgttgataaa gtttgtaaaa ttgtccactg tgtttgatga gcggtctgat
     9841 gtgtagttga gtgaatcgtt gaaactgata ttttcgctca aaacaatggt aacaatgtca
     9901 cctacagagc gcgctctcac accgccaaag agtgattttg gctctgaata aaaagactgc
     9961 gatgtgccta aaacaaacaa tgactcggca tttgcacttt gcatttgagc tccctgtgca
    10021 atcatcagca gtgctgtgag cattatcaaa acttttctat aattcttttt attaatctta
    10081 gccattttta ttttatctct ccccaaaaaa gttttttatc ctcctggcaa atttctttca
    10141 gaaatttgtt cgtttcggaa actttgtttc ctgcacaacg tcggtttaga acggttgtgc
    10201 ccttacggtc aaactgaccg tttgcccttc agggcttcac acacttgtca tatttgcaca
    10261 agcacctgat ttacgcctgt tacctcgccc gtgtagattt tgttaaatct tttgtttttt
    10321 acctgaattg tgtctccttt gttgccctgc atcagtgcaa tgccttctac tgcaatatta
    10381 agagcgttac ctgttctaaa atttactgtt accattgcat ttttaactat atcgggtttt
    10441 gacattgtgt atcttttcaa aatcatgttg ccggggaaaa acgcctttgt ggcaactagc
    10501 tctcttgaaa tgtcttcaag gcttacagtg ttgttgaggt ttcccatgat gtccattctt
    10561 ttgaactcaa ctgactgcaa aggaataatt ttgtctcttt gaataacctc ttttgctact
    10621 gcaacatgct tgtaagcttt tgtctcaagc ggaacatagt atgttcttgc gtagtttttg
    10681 tttacgtata tgtttacttt tttgaactct tttggtgtca ggctctgata accgttagat
    10741 acaatctcta cagtaacttt tccatcaggt acagtaaaac tttgtacagg aaggtggcct
    10801 acagtaactt cacagtcatc aaggttgaat ttttgcaaat cttttttggc ctgagcagac
    10861 acaagagcct taaactggtc agcagaaaga gtctgggcaa aacactgtgc ggccatgcct
    10921 gagaagattg tgattattaa taatgtttta ataagttttt tcatttactg ccttttagtt
    10981 taactgttag ttagttatct ggttagttgt tctcaagata tcagacgctg ctgtgatgat
    11041 ttttgagttg gtttcaaaag ctctttccgc tttaatcagg ttaatcattt cgtcaacgat
    11101 ttgtacgtta gagccttcca aaaacgcctg ttggatggaa ccaagaccgt cctgatcagg
    11161 agtacccggg ataggtgtgc ctgatgcggg agtttctaca tacaggttgt ggcctacaga
    11221 taaaagacct gcggggtttt ggaaccttac aagctgaatc tgacccacga ttgtttgagt
    11281 gttgtcgttg cccactttaa cagatacgtt accgtcaggg gtaatgttta cttctgtagt
    11341 gttttgagga attgtaatct gcggctgcaa aaggtatccg tcagatgtac aaagctggcc
    11401 tacagcatcg ggtgcaaatg agccatctct tgtgtatgcg agtgtaccgt caggttttac
    11461 aatctggaaa aagccttcgc cttcaataca catatcgtat ttgttgccgg tgctttgaac
    11521 aacgccttga gtcatgattt ttcttgttgc agaggttttt acaccgagcc cgatttctac
    11581 accgacaggc tggtaagtac cttgcgtaat cattgcgccg ggagttctta ttgcagttga
    11641 gagtaggtct tgaaattcta ctctggattt tttaaaccct gttgtgttaa cgtttgcaac
    11701 gttgttagct acaacgtcca annnnnnnnn gctatcatac ctgttgctgc tgttgttagt
    11761 gatcttaaca ttttgtgtta tcctcccggg ttaatagtct ttttttaaac gttcagtctg
    11821 ccaaggttaa ttgcctgtga aagctgattc gatttttcct ttacaagatt gctcaatgtt
    11881 tcgtagtttc ttgaaacatt gattgagtta atcatttcgt ttattacgtt tgcgttagaa
    11941 agctctattg caccctgctg tacagagaat ttttgtgctc tcaattcagg gtttgttgta
    12001 atatcttttg gcacgtacat tgatgtgccc actgccatca tctcgtcttt gtttgcaaag
    12061 tcaaagatac cgattctttg cagtgctgtt gcgttttcgt ttctcattgc aacgattgag
    12121 ccgtcttcgt ttattgcaag gtctttttca gaacctatat tgagctctgt catgttcaat
    12181 ctgataggct ggttctggtc atccattaca aggtttcctt gcatgtctgt caaaaggttt
    12241 tgagagttta tgaagaaaga accgtttctt gtgtaagtta ttgttccgtc aggtgctctc
    12301 aatttgaaga aaccatcgcc ttcaatacca agatcaagcg ggttgcctgt tcttgataac
    12361 acaccttgcg aaaattcgtg cacgagtttg tttgttacag agcccatgct gatttctcca
    12421 acgagtcttc cgtcgtggtt tttggggttg tttctttcaa caggctcttc aattactgcg
    12481 ttgtacacgt ttctgaagga caatccttct cttttgtagc cggctgtatt cacgtttgca
    12541 atgttgtttg caatagagtc ttgaaaatct attaagctca tcatgccttt tgcggctatg
    12601 tcaattcctc ttgaaatnnn nnnnnnnnnn nnnnnnnnnt ggccgttttg agcattgtat
    12661 ttttgataca ttgacataat attttttacg taattttgtg tttctttgta aggcggaatg
    12721 ccgttatact tggcaacagc atttggccct gcgttgtaag ctgcaagcgc cagtgatttg
    12781 tccccgccga atctgtctaa aagacctttt aaatattttg taccgcccgc aatgttttgc
    12841 tcgggatcat acgcgtcttt tacacccatt gagcttgctg ttgccggcat gagctgcatc
    12901 aaacccattg ctccgcagtg tgatgtgact ttgggctgga agcctgattc ctgctttata
    12961 acagctttta caaatgcact gtccagaccg tttttggcgg aatattgctc gataagcgag
    13021 tcaatatcag cgtttccgct tgatgtagaa gcaagctcgc ttgagaaaac tttgtctgca
    13081 aaaggtgtgt cttttagctt atttactttg tttgacatgt tgttatcaag aattttttga
    13141 aaatcctgat caggcctaac aggctctgcg ccaaaggaag ccagagcatt gaatgtgctt
    13201 tcaatagcct gcatgcgtct tagagttata tctannatcc tgaaatttcc actattcttg
    13261 ttccccgccc agtctgattt aaaccggtca ttcttaccat taattctgaa gagctagact
    13321 ttacctatta ctcctcacta ataaaatact ctatctatac tattttctca tcaacccgat
    13381 ggttgaaatt ataaaaaccc gtattgacca tgtggttaat acgggttgaa ttaaatataa
    13441 tcttaaaaat tttatacttt tgctgtttct tcttcttctt ttttgggtgt catgtgttcg
    13501 ggaataaatc ctgtgttgaa tttgcccgag ataaacacct cgtttgtaag aatttttttg
    13561 tgatacggaa ttgttgtttt aattcctgta ataacgtatt catccagagc acggagcatt
    13621 ctttttcttg cgtcttctct gtccacaccc cagcatatga gtttgcctat cattgagtcg
    13681 taataaggcg gaattttgta tcctgtatat gaatgagaat caactctcac accaaaaccg
    13741 ccgggtgcaa tgtatcctct gatttcaccg gggcatggca taaaatcttt gtcagcgtct
    13801 tctgcgttaa tacggcactc tatagcatgg ccgcgcagtt tgatatcatc ctgtgtaaag
    13861 gataattttt cgcccgaggc aactcttatc tgttctttta acaggtcaac gcttgatacc
    13921 atctctgtaa cacagtgctc aacctgaata cgtgtgttca tttccataaa ataccagctg
    13981 ccgtcgtggt ctaacagaaa ctcgattgta cctgcgcctt cgtagccaat aacttttgca
    14041 gcagtaacag cagcagcgcc catggctttt cttgtttctt cgtcaatagc cggagaaggc
    14101 gcttcttcga gaagcttttg gtgtcttctt tgaacagagc agtcgcgttc tccaaggtga
    14161 acaacgtttc cgtggctgtc tgcaatgatt tgaacctcga tgtggcgggg gttgatgatg
    14221 tatttttcaa tgtaaacccc tgcgttgcca aaagcgtttt gtgcttctgt ctggcacagt
    14281 gtaatagctt cttcaagctc ttctgcgttg ttggcaattc tcatgccttt accgccgccg
    14341 ccggctgttg ctttgacaat aacggggtat tttgcttttg cggcaaattc tttggctgca
    14401 tccatgtcat ctacaaggtc tgtaccgggt gtaacaggaa ctccgttggc tgtcatggtt
    14461 tttcttgcag tggctttgtc gcccattttt ctcattgctt cggcagaagg cccgataaat
    14521 ttgataccgt ggtctgtgca gatatcaaca aaatctgcgc gctctgacat aaatccgtaa
    14581 cccgggtgga ttgcgtcagc accgcttgtt aaagctacgg aaattattgc gggaatattc
    14641 aggtagcttt ttgcactctg cgcaggccct atgcagtatg cctcgtcagc aaggctgaca
    14701 tgaagagaat ctgcatctgc ctgtgaatat acggcaactg ttttgattcc cagctctttg
    14761 caagctctta tgattctgac ggcaatttcg cctctgttgg cgattaaaac tttttttatc
    14821 atatctttta tcaatcccta aagtctgttt gatagtataa ttttatctca aacttattaa
    14881 ttttccataa tttattaata tttatggtta cattgtaaat tttatgcata aaaaaacaga
    14941 ttcctttaa
//
LOCUS       DABS01000165            5259 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15292, whole genome shotgun sequence.
ACCESSION   DABS01000165 DABS01000000
VERSION     DABS01000165.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5259)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5259)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5259
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            219..710
                     /locus_tag="CPT85_07595"
     CDS             219..710
                     /locus_tag="CPT85_07595"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21702.1"
                     /translation="MEKDFMQVSKLLFPEKSSLNRTPSQKFEDQLRNKLHSMRNERMH
                     ILNPKSQKQDFENENYKEIAYFIKNHVLSVGKEQAVKDFQTGLNFLHKDLLEPLKEDG
                     DFGEKTFKAFYAIFKHYDIDIIKNAICKGALSNTVIGTSSDKTINTQALVNQIQNNLG
                     GIK"
     gene            710..1819
                     /locus_tag="CPT85_07600"
     CDS             710..1819
                     /locus_tag="CPT85_07600"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21703.1"
                     /translation="MGNLVLKGHISYATKRKYKWVAEFGKNTCEKCAALHGQEFDEDE
                     VPYWPHPNCRCKVEEISVVDEIESEINEYKEELQQLKLQANELLGDTRVLRKQIEKLI
                     KEAHSKEANSLEGRLTRLEYEVYKLIDKIESFTCDTIDKFVIQKIDQQIDIIKKEVSN
                     IYKNLESIVIKYAPKPVFDKAVQVYGKYQNQPDGAAFYEIAASKFSSSAAKEYINKNG
                     RIYEKVSDLNNRNLELFIREKLLKQIGTSETRGVLYNEHSSVSQAITRENSFRILISH
                     KKEELLNNRRIEDTRLSFEQDNLRNAYHYADIINIKLDSKDNLYALVVDTYDFNKFED
                     NPLVKKGGEYQDKGKLEPYYNIAILKIPKEQWINY"
     gene            1916..2362
                     /locus_tag="CPT85_07605"
     CDS             1916..2362
                     /locus_tag="CPT85_07605"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21704.1"
                     /translation="MLTPVVPIFLVSSIVIFIALHKYSNNEFILKDCFLVFNLIVFLL
                     LYYVSKLFIFPLIYKFSKNNKYISNFFERIKKQKSFRYKVLFFSILTDIIVILAFLAS
                     SFLTDIKYFVQAFVFYFLIGGGGVFICYVSLILWFKIEEKLSKNCG"
     gene            2634..3329
                     /locus_tag="CPT85_07610"
     CDS             2634..3329
                     /locus_tag="CPT85_07610"
                     /inference="COORDINATES: protein motif:HMM:PF06429.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21705.1"
                     /translation="MKLRGEINFFENGLTTSIRAMHLQTEMLGIINENYNSFDKVGFQ
                     RKEPVVSSFAEYIGTHALSTAVDDSIGRIGHSNNPLDLAIANKGYFQYQSPDGIKITR
                     DGRFKLDKDGNLLTLENAHVLANDGTPIKLPVVPEKLEDVKVYKNGDVKVFNKATNQL
                     EYAGTLSVVTNQGVAVLDPNIKQGYNEYSNVSLNTEILQIIPVRRNFDANRQLFIIQN
                     NNLSKAIQSLSSS"
     gene            3403..4116
                     /locus_tag="CPT85_07615"
     CDS             3403..4116
                     /locus_tag="CPT85_07615"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21706.1"
                     /translation="MTTLQGLIRRGIINTNVQFERLGYISNNIGNLNTNAYKQVRFEQ
                     ILDENGYLDGEVRYDYSQGSFMRTERPLDVCLTGPGFIPVTSPNGDVQYTRDGSFKLD
                     KDGYIVTNDGYLVGDGIKVPVNHEGLRIKKDGTVMIIQKGHTEYQTLGKIPVVQFQNP
                     EGLKSAEYNKVVPTAESGEPQLIKEHDYVAQGGLERSNANYIANVNEVLRLNSSMIAG
                     TRLMKVVDDMYQRSINLTQ"
     gene            4153..4497
                     /locus_tag="CPT85_07620"
     CDS             4153..4497
                     /locus_tag="CPT85_07620"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21707.1"
                     /translation="MYTPKDPIIKTNLMLDLISQRQRALSTNLANMDTPNYVRKDISF
                     DQYLGTMNNPLETELSIKLGPSGLIEEQDVGVDPTFELAEMQKMSIMYAVASRKMSAI
                     INEMKTAANVGK"
     gene            4517..4960
                     /gene="flgC"
                     /locus_tag="CPT85_07625"
     CDS             4517..4960
                     /gene="flgC"
                     /locus_tag="CPT85_07625"
                     /inference="COORDINATES: protein motif:HMM:PF06429.11"
                     /note="with FlgF and B makes up the proximal portion of
                     the flagellar basal body rod; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="DAB21708.1"
                     /translation="MSLMETMNIGEKSLQAHGARIKIHAKNIANLDTPNYVRKIPVLN
                     ATDDISFHGLLNSMKEDVFGVGTIPFQQGGVRLTGVVEDPTLGERIYKPGHPDADANG
                     YIRTSNVNPIVDIADANIAQRAYEANLAVINITKSMAQRAVEIGK"
     assembly_gap    5112..5115
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1898 a          852 c          969 g         1536 t
ORIGIN      
        1 gaacccagtc tatgctattt tttcatgttc ttgtgacctc cctttcggag gtcctaatct
       61 atatacgcaa cgcaagcgtc gctcagtcga acccagtcta tgctattttt tgttgtcaat
      121 agttttttaa caaaaattat tacccgaacg ggtacaatta atttgctaca ataaaacaaa
      181 tagatatatg cttcacaaaa tccataagga ggaaatttat ggaaaaagac tttatgcaag
      241 tgtcaaaact gctcttcccc gaaaaatcat cattaaacag aaccccgtca caaaaatttg
      301 aagaccaatt gaggaataaa ctgcattcaa tgagaaatga acgaatgcac atcttaaatc
      361 cgaaatcaca gaaacaagat tttgaaaatg aaaactacaa agaaatagca tactttatca
      421 aaaaccatgt tctctctgtc ggaaaagaac aggcagtaaa agattttcaa acaggtctta
      481 attttttgca caaagattta ttggagccgt taaaagaaga cggtgacttc ggcgaaaaaa
      541 ccttcaaagc cttctatgcc atatttaaac attacgacat agatattatc aaaaatgcaa
      601 tatgcaaagg agccttgagt aacactgtaa ttggaacatc gagtgacaaa acaataaaca
      661 cacaagcact ggttaatcag attcagaaca atttaggagg tattaaataa tgggaaatct
      721 tgttttaaaa ggacatatta gctatgcaac aaaaagaaaa tacaaatggg tagctgagtt
      781 tggaaaaaac acatgtgaaa aatgtgctgc gttgcacgga caagagtttg atgaagatga
      841 agtaccatac tggccgcatc caaactgtcg ctgtaaagta gaagaaatca gcgttgtaga
      901 tgaaattgaa tcggaaatta atgaatacaa agaagaactt caacagttaa agcttcaggc
      961 gaatgaactt ctcggagaca caagagtatt gagaaaacag atagaaaaac tgataaaaga
     1021 agcacatagc aaggaagcaa actcgcttga aggcaggctt actcgtcttg agtatgaggt
     1081 atataagctt attgataaga tagaatcttt cacttgtgat acgattgata agtttgtgat
     1141 acagaagatt gatcagcaga ttgatattat aaaaaaagaa gttagtaata tatataaaaa
     1201 tttagagtca atagttatta aatatgctcc taaacctgtt tttgataaag ctgttcaagt
     1261 ctatggtaaa taccaaaacc aacctgatgg tgctgctttc tatgaaattg cagcaagtaa
     1321 attttctagt tctgcagcaa aagagtatat taacaaaaat ggtagaatat atgaaaaagt
     1381 ttctgactta aataaccgta acttggaatt atttatcaga gaaaaattgt taaaacaaat
     1441 aggaacaagt gaaaccagag gtgttttgta caacgagcat agttctgtat cacaagctat
     1501 tacaagagaa aatagtttta gaatattaat ttctcataaa aaagaagagc ttttgaataa
     1561 ccgaagaatt gaagatacta gattatcttt tgaacaagac aatctacgaa acgcatatca
     1621 ttatgcagat attataaata tcaaacttga ttctaaggat aatttatatg ctttagttgt
     1681 tgatacatat gattttaaca aatttgagga taaccctctt gttaaaaaag gcggtgaata
     1741 tcaagataaa ggtaaacttg aaccatacta taatatagcg attttaaaaa tacctaaaga
     1801 acaatggatt aattactaaa actataaaca gtgatatgta gtattttata tccctgtttg
     1861 ttattattaa cttatgaaaa aactttttta tttgttattt tggattctaa attttttgtt
     1921 aacacctgtt gtaccaatat tcttagtttc atcaattgta atttttattg cattgcacaa
     1981 atattccaat aatgaattta ttttaaaaga ttgttttctt gtatttaatc ttattgtttt
     2041 tttactttta tactatgttt caaaattatt tatttttcct ttaatttaca aatttagtaa
     2101 aaacaataag tatattagca atttttttga aagaataaaa aagcaaaaaa gttttagata
     2161 taaagttcta tttttttcaa ttttaactga tattattgtt attcttgctt ttttagcttc
     2221 atcgttttta acagatatta agtattttgt acaagctttt gtgttctatt ttttaatagg
     2281 cgggggtgga gtttttatct gttatgtatc attaattttg tggtttaaaa tagaggaaaa
     2341 attatcaaaa aactgcgggt aatctgtggg tcattggtat gcagtttggg catttttgta
     2401 aaattttttg gctgaattta ctattgatta tttataacaa gcttattgcc aaacagcttg
     2461 ttatataggg tgttgataaa gggctgatat gcaagtttga gaataaattt tcgactttag
     2521 tattttttgc aaaatctcat ccatgtatat gattttgtgt gatttgatta ttttttttga
     2581 cttttatgcc gacatcatta aagagtaact atgtagaagt aaaggtgtaa atcatgaaat
     2641 tacgcggtga aataaacttt tttgaaaacg gtttgacaac cagtattcgg gctatgcacc
     2701 tgcaaacaga gatgctgggt attatcaacg aaaactacaa ctcatttgat aaagtagggt
     2761 tccaaagaaa agagcctgtt gtttcttcgt ttgccgagta tataggcact cacgctttgt
     2821 ctacagcagt tgatgattcc atcggcagaa tcgggcattc aaacaatcct ttagaccttg
     2881 ctattgctaa taaaggatac tttcaatatc agagtcccga cgggataaaa attacacgtg
     2941 acggccgttt caaacttgat aaagacggca atcttctgac attggaaaac gcacacgttc
     3001 tggccaacga cggcacaccg ataaaactgc ctgttgttcc tgaaaaactg gaagacgtta
     3061 aagtttataa aaacggtgat gtaaaggtat tcaataaagc gaccaaccag cttgaatatg
     3121 ccggtacatt gtcagttgtt acaaatcagg gcgtggcggt tcttgaccct aatatcaagc
     3181 agggttacaa cgagtattca aatgtttctt tgaatacgga aattttgcag attattccgg
     3241 taagaagaaa ctttgatgca aacagacagc tgtttataat ccagaacaat aatctgtcaa
     3301 aggcaataca atcattgagc agctcataaa ctaactaaat aagcagcttc ataagagcag
     3361 acttcaaggt aaggacggtt aggcaggtta gaaaggtatt ttatgacaac attacaaggt
     3421 ttaatcagaa gaggcataat aaatactaat gtacagtttg aaagactggg atatatttca
     3481 aacaacattg gcaacctcaa tacaaacgct tataaacagg ttcgttttga gcagattctt
     3541 gacgaaaacg gataccttga cggtgaagta agatatgact attcgcaagg ctcttttatg
     3601 agaacagaac gccccttgga tgtatgtctt acaggcccgg gttttatccc tgttacatcg
     3661 ccaaacggag atgtgcaata cacacgtgac ggttcattca agcttgataa agacggatat
     3721 attgtgacaa acgatggtta ccttgtaggt gacggtatca aggttcctgt aaaccatgaa
     3781 ggtctcagaa taaaaaaaga cggcactgtc atgattattc aaaaaggaca tacagaatat
     3841 cagacacttg gaaagattcc cgttgtccag tttcaaaacc ctgaagggct taaaagtgca
     3901 gagtacaaca aagttgtccc cacagcagaa tctggcgaac cccagttaat aaaagagcat
     3961 gattacgttg ctcaaggcgg acttgaacgt tctaacgcaa actatattgc aaacgttaac
     4021 gaagttttga gactcaactc ttcaatgatt gcaggcacaa ggctgatgaa ggttgttgat
     4081 gacatgtatc aacgctcaat taaccttaca cagtaataat ttgtcattct gaaatttaaa
     4141 aggatattca aaatgtacac tccaaaggac ccgataatta aaacaaacct gatgctggat
     4201 ttgatatcac aaagacagcg tgccctgtcc acaaaccttg caaacatgga cacgccgaat
     4261 tatgtgagaa aagatattag ctttgaccag tatctcggta caatgaataa tcctcttgaa
     4321 acagaattgt ctataaaact tggcccctcc ggcctgatag aagagcagga tgtcggtgta
     4381 gaccctacat ttgaacttgc agagatgcaa aagatgtcca ttatgtacgc agtagcttca
     4441 agaaagatgt ctgcaataat aaacgaaatg aaaacagctg ccaatgttgg caagtaataa
     4501 gtaagaaggt gacaaaatga gtttaatgga aacaatgaac ataggtgaaa agagcttgca
     4561 ggcgcacggt gcaagaatta aaattcacgc aaaaaacatt gcaaaccttg atacacctaa
     4621 ttatgtaaga aaaattcccg tgcttaatgc aactgatgat atctcttttc acggactctt
     4681 aaactctatg aaagaagatg ttttcggcgt tggtacaatt ccttttcaac agggcggtgt
     4741 aagactcaca ggcgtagtag aagaccctac tcttggtgaa agaatctata aacccggtca
     4801 cccggacgcc gatgctaacg gttacatcag aacatcaaac gtaaacccca ttgttgatat
     4861 tgcagatgca aatattgccc aaagagcata tgaagcaaac cttgcagtaa taaatatcac
     4921 aaaaagtatg gctcaaagag cggttgaaat tggtaaataa taagtaaaat caggcaggta
     4981 gtaagttaat gttttcaccc acaatacaag gatttataga ccaaggcggt aaggaagccg
     5041 caatgcaaag ggttcaatca atcagagccc atgttgcaaa tattgaaaaa caaataaatc
     5101 ctgaatctgt annnnttttg ccgagattct aaaagccagc caaaaaggcg aggggcagtt
     5161 tagaacaggc ggtaacaatt ttcttagctt aactacagct gcaaatgcgc ttcaaaaaaa
     5221 tacagtcaaa gctgcaaata atgttcaaaa caatgtaca
//
LOCUS       DABS01000166           10200 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_6467, whole genome shotgun sequence.
ACCESSION   DABS01000166 DABS01000000
VERSION     DABS01000166.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10200)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10200)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10200
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            56..646
                     /locus_tag="CPT85_07630"
                     /pseudo
     CDS             56..646
                     /locus_tag="CPT85_07630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007062591.1"
                     /note="frameshifted; too many ambiguous residues; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
     assembly_gap    198..214
                     /estimated_length=17
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    396..419
                     /estimated_length=24
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(676..1578)
                     /locus_tag="CPT85_07635"
     CDS             complement(676..1578)
                     /locus_tag="CPT85_07635"
                     /inference="COORDINATES: protein motif:HMM:PF14903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21666.1"
                     /translation="MKKIVILLGLLMAFNGCAYAAQDEVLPLKVSDVKVFSDDGYFGL
                     KDKNGNIVVEAKYKKLIKVGDGAWIIQQKNRFGLIDSNGGILVKPRYRHVERVFGKYV
                     KLGNDNDYGLYDETGKAVIAPEYSSIEPLFGKMFLTCKKYKYGIVDFEGKKLLDNEFD
                     DIYMPNPKALRVQYEGEWYEIERLKSENITLPEGVKKVKINNEDFQVTHLVTNTGLLS
                     GYSAVTAADYTLKILSSISPAYEDTIDDLMLSQGADTVSIFVKLGWIPKFPFTYAKKY
                     YQNLRNPNNGPLAGVKNELKRQIK"
     gene            1653..4454
                     /locus_tag="CPT85_07640"
     CDS             1653..4454
                     /locus_tag="CPT85_07640"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21667.1"
                     /translation="MTKKSCIISFLIIFAAVLISLPFVIYLKVLPYAVSNEKVIAFVS
                     EAVKESTGAELVIENPELKTQIAKPFAPRMLFRIHELSLTKDKKQMLSVKNLETMMSF
                     EKIFDKTLMLKQIGLDYFYADVNALMALAPQPEQPQKQQQFDWKIDWLDSLLYLKDCE
                     IVYALDKATRLDIKGKNLVISDTREPKLVRFGFDIDITKGKDKLKLTIDDGDKVFIKD
                     KKIVVDDAVLGVNGSKVFLKAEADKKNNFSLTVFSKKFDVKDAVKLLQTNLVVPNGSD
                     MLVFFKDIKGDFDFSVNMTNKDLNGKVTLNNGSLKIIPLNNLPVVAQGGVVDITANEI
                     FLKDFKGYYGTSKANQVQMAGNIKDYTKSVDTNIEVNGVATNDLTKNYLSKLVGCPLT
                     LTGDSGSKIVVKSKYNKIDLSIMGKIAKGYDILVDGMSLSPVNYDRAYKADMHIDGNN
                     LDIKSINYYIAQEINKNSKIRPILTVDGNMDMTTLQIHKLGFNIPKPLPSEFLNVLIG
                     QKVFKRGTIAGNMYYLSNGKIPKLKGQLEMHKVAIPSQRMFIKEGIFNTDKDLLHITS
                     EGKFKRSDYKFNGNIVNELIFPVIIKDINLTVDNIDIDRMLMSMNKQNTQEVAASQAQ
                     EPVTAQTLVSASNDNENDYDSYTFDTGLLIVERCVLHVVKGFYKDINFGNLYANLTLD
                     KNGLLKIQSNKFDFAEGISTLKVMCDLKKHDYSIRLGVKDINSDLIAGTLLGLKKEIS
                     GKAMGLIELNTDDSLKLNGRIRFDIQNGTIQKVGLVQYALNFAALFRNPITMISPSTI
                     VDLVNIPEGTFKKINGDLVMKDNVVEKIMIKSSAAQLSSFIIGRYEIETGDASLRIYT
                     KFSSKNKGFAGFLRNLSLNSLANKVSVTNRNDANYYAAELKMIPELEIGEEESQVFLT
                     KVDGDVINFNFLSSLKKIK"
     gene            4569..4853
                     /locus_tag="CPT85_07645"
     CDS             4569..4853
                     /locus_tag="CPT85_07645"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21668.1"
                     /translation="MSFSVNSVSSHSVSRYEMKSQYRNAGIPDDVISQGETAIQNYAF
                     ENGITVPDFTSQDKEPLFEMNSNAQDTGVQAQSAQSNQSDGSTKRLKYNA"
     gene            complement(5028..5684)
                     /locus_tag="CPT85_07650"
     CDS             complement(5028..5684)
                     /locus_tag="CPT85_07650"
                     /inference="COORDINATES: protein motif:HMM:PF00196.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="DAB21669.1"
                     /translation="MNILLVEDYQHTRKTIAYGLRTRLGEIELAESDNGLAALNYIKA
                     GNKADIVLMDISMPVMNGIDAAKAIKEILPDVKIIMLTSFSDKKLVLSAFNAGANAYC
                     MKNIKIDELVSVISSVLHGAIWIDPSIAQYILEVLNSSRVEESSEPKDNINAGFDLTA
                     RETEILKLVARGKSNKDIADELVLSIHTVKNHLKNILQKLCVEDRTQAAILAIKENLV
                     "
     gene            complement(5681..7291)
                     /locus_tag="CPT85_07655"
     CDS             complement(5681..7291)
                     /locus_tag="CPT85_07655"
                     /inference="COORDINATES: protein motif:HMM:PF02518.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21670.1"
                     /translation="MLKFAKYFFIVFLITAILPLVLMFAWNNSQMEKFHNAMAKSAMS
                     TGLMRLEYSVKTNLKVQEGDILRKLYYILPNDKNLSHIKNILNDYNTEVIQKPIKTPV
                     SFYERKNFDLYCVTLVPFDNSTKGLKISKPVSLDLLRPTGPYTIELRFNKDDAAYEFK
                     NVAFDPMAFGPPKKIFLLLSRVAKPHYKENSRREIALKGEDNSNAAYLTIELAFGPFR
                     GMIDSIFTSLIILLVGILSSFVIGLIIKRVFVTPVMALSKAADQVKKGNLNFKLDASS
                     KIEIIKNLYENFNDMILNLQTKEKLRESFISNLTHDLRTPLVSQSQSLEFISQKFKEI
                     GLTNEYELAESLAKNNEHLLKMVNLILDSYSFDPEKLKLSIEKADLYEIIEDCKEQLK
                     PLLAEKNIEFVNNIYKGGTLIEADLFQIKRVFINLLSNAIDNTSGENKYIKAAARFED
                     EEVLITIEDNGNGIAKEDLKFIFDRYYSGKSLERKLGSGFGLSVCQKLIDMHNGQITV
                     ESEINKYTKFIITLPLSQHPGKGTKEQP"
     gene            complement(7485..9734)
                     /locus_tag="CPT85_07660"
     CDS             complement(7485..9734)
                     /locus_tag="CPT85_07660"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21671.1"
                     /translation="MPEFEYQQSLRYKREGYADIVGDKISQGQRAFWDSLDDRERTER
                     AKKSVEKMENWWNSLTRNQKLDMIADQLTELDMLKMFKKEQRAQQKLNPAKQEPQETP
                     TEPRKHSKVGSNKLSQDELFLKWAANNLKIFQENLSEADRDTLHVKSMQRLAFRWANM
                     SQAERTDYISRMKAGSEPLRYTMIDAWNHSSDLIKDLSQHLRSNQIYKPADLLYSTQE
                     FSRFQSEVMTEFWQTHPDYAKQLGENIIKSQEKIQTAISRGTFEELKKQIMRDKNQRV
                     KEIEKFKTTLAPSAPTVDEAQYKKDFKAAYNSHIYGKVKAIPKNFYNDMYDTALEKLP
                     ESAIRAWTKNLNGQSLSAEETAVVRKFVTEELPETARYNRALEAAMADTLYEFTKDPS
                     VYEMSNSDVKTAMYHLERGEEPIIMQSHKTGKTFTLNIVKKDKKVDAQRINNLYETYK
                     QDLSRDEIHEIAELYFNETEQKDELEKYINTYGKSALIIFSNKSAYPAEVKEAFYKKF
                     KQNMPEILKNNVICDYDQRNAFEKEAIVKPALYRFEKKIDFIPAAYRNAYLKEMAHNF
                     RNQASISDLKDFEALCCTKRKDAASGSKIAIIAKSQMTTENKLKSLAMEQALADVLYD
                     ATGNAEVYALQFEELYDNLEVFSLVKKFPSQERTITSQTNHTMTFKAVKKPDLRSLSK
                     LYNEYLSEIVQWVNEEVKQTGTADPEDLLYILNPDEQEPLKDINTARRMSIYGFKINK
                     LTIYPNKEL"
     gene            complement(9832..10200)
                     /locus_tag="CPT85_07665"
                     /pseudo
     CDS             complement(9832..10200)
                     /locus_tag="CPT85_07665"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     start; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    9870..9889
                     /estimated_length=20
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         2889 a         1827 c         1957 g         3466 t
ORIGIN      
        1 ataatttata tagcttattt gttatttttt aacaaataat taaggagaaa aacaaatgaa
       61 agtattattg gtcaatggaa gctctaactt aaaaggctgt acttacactg cattgtcaga
      121 agtagcagga gttttggagc aaaacggtat tgaaacagaa tttgtacaac ttggtaacgg
      181 acctataaga gattgcannn nnnnnnnnnn nnnntttgcg catttaacga agataatgtt
      241 aatgcattta ttcaaaaagc aaaagaagct gacggttttg tttttggctc acccgtttat
      301 tatgctcatc caagcggaag acttttgtcg tttatggaca gagctttttt tgcgggcaaa
      361 aagaattttg catacaaacc cgctgctgct gtggtnnnnn nnnnnnnnnn nnnnnnnnnc
      421 aaaacatttt acaataagca atatgcctgt tgttccgtca aattactgga acatggtgca
      481 cggaagcaaa cccgaagacg taaggcagga tttggaagga atgcagatta tgcgcaatct
      541 tggcttgaat atggcgtgga tgctcaagtg tatcgaagcc ggcaaaaaag caggagttcc
      601 actccctgtt gcggaagaaa agatttggac gaattttata cgataaaaaa tagctgcatt
      661 tgcagctatt ttttgctatt ttatttgtct tttaagctca ttttttacac cggcaagagg
      721 cccgttattc gggtttctta agttttggta atattttttt gcgtatgtaa aaggaaattt
      781 gggaatccat ccgagtttta caaaaataga taccgtgtca gcaccctgtg aaagcataag
      841 gtcgtctatt gtgtcttcat atgccggaga tattgaagag agtattttga gcgtgtaatc
      901 tgctgctgtt acagccgaat aacctgacaa aagacctgta tttgtgacaa ggtgggttac
      961 ctgaaaatct tcgttgttaa tttttacttt ttttacgcct tcaggcaggg taatattttc
     1021 tgatttgagc ctttcaattt cgtaccattc gccttcgtac tgaactctca atgctttggg
     1081 atttggcata tagatgtcat caaattcgtt atcgagcaat tttttgcctt caaaatcgac
     1141 aatgccgtat ttgtattttt tacaggtcaa aaacatcttg ccgaacaaag gttctataga
     1201 cgaatattcc ggtgcaatca ctgcttttcc ggtttcatca tacaggccgt aatcattgtc
     1261 attgccgagt tttacatatt tgccaaagac tctttctaca tgacggtatc ttggttttac
     1321 cagtatgccg ccgttgctgt caataagacc aaaacgattt ttttgctgga taatccaggc
     1381 tccgtctccg actttgataa gttttttgta ttttgcttca acaacgatgt tgccgttttt
     1441 atctttcaag ccgaagtaac cgtcatcaga aaatactttt acatcagaaa cttttaacgg
     1501 caaaacttcg tcttgtgcag cataggcaca accgttgaat gccatcaata aacccagtaa
     1561 aataactatc tttttcataa caatatgata acataatatc gcattatgtt ataattttat
     1621 taaggaatta agttggatag agtaaggaaa atatgactaa aaaatcttgt attatttctt
     1681 ttttaattat atttgcggct gttttaataa gtctgccgtt tgttatttat ttgaaagttt
     1741 tgccatatgc agtgtcaaat gaaaaggtca ttgcatttgt aagcgaggct gttaaagagt
     1801 caacaggagc agagctagtt attgaaaatc cggagttgaa aacgcaaatt gcaaaacctt
     1861 ttgctccgcg gatgcttttt aggattcatg agctgtctct tacaaaagat aaaaagcaga
     1921 tgcttagtgt aaaaaatctt gagacaatga tgtcgtttga aaagattttt gataaaactc
     1981 ttatgctaaa acaaatcggg ctggattatt tttatgcaga tgtgaatgcc ctgatggcac
     2041 tggctcccca gccggaacaa ccacaaaaac aacaacaatt tgactggaaa atcgactggc
     2101 ttgattctct tttgtattta aaagattgtg aaatagttta tgctcttgat aaagccacaa
     2161 ggcttgatat caaaggcaaa aatcttgtta tctcagacac cagagaacca aagcttgtac
     2221 gttttggatt tgatatagat attacaaaag gcaaagacaa gctcaagctc acaattgatg
     2281 acggtgataa agtttttatc aaagataaaa agattgtggt tgatgatgct gttcttggtg
     2341 taaacggctc aaaagtgttt ttgaaagctg aggcagacaa gaaaaataat tttagcctta
     2401 cagtattttc taaaaaattt gatgtaaaag atgctgttaa acttttgcaa accaaccttg
     2461 ttgtgccaaa cggctctgat atgcttgtgt tttttaaaga tataaaaggc gattttgatt
     2521 tttccgttaa tatgacaaac aaagacctca acgggaaagt aacactcaac aacggttctc
     2581 tcaaaattat tccgcttaac aatcttccgg ttgttgcaca gggcggtgtt gttgatataa
     2641 ctgcaaatga aattttctta aaagatttta aaggctacta cggcacaagc aaagccaacc
     2701 aagttcaaat ggcaggtaac ataaaagatt acacaaaatc cgttgataca aacatagaag
     2761 taaacggagt ggcaacaaat gatttaacca aaaattattt gtcaaaactc gttggctgtc
     2821 cgctcacatt gaccggtgat tcagggtcaa aaattgttgt taaatcaaaa tacaataaaa
     2881 tcgacttgag cataatgggc aaaattgcaa aaggctacga tatccttgtg gacgggatgt
     2941 ctttgagccc tgtaaattat gaccgtgcct acaaggcaga tatgcacata gacggcaaca
     3001 atctggatat aaaatctata aactattata ttgctcagga aataaataaa aattcaaaaa
     3061 tccgtccaat actcactgta gacggcaata tggatatgac tacacttcaa attcacaaac
     3121 tcggatttaa tattccaaaa ccgcttccaa gtgaattttt aaatgttcta atcggccaaa
     3181 aagtctttaa aagaggcaca atagccggaa acatgtatta tctttccaac ggaaaaatcc
     3241 caaaactcaa agggcagttg gaaatgcaca aggttgcaat tccttctcaa cgcatgttta
     3301 taaaagaagg tatttttaat acagataagg atttgcttca tataacttcc gagggtaagt
     3361 ttaaacgatc tgattacaaa ttcaacggaa atatcgtaaa cgagctcatc ttccctgtta
     3421 ttatcaaaga tatcaacctg actgttgata acattgatat cgacagaatg cttatgtcta
     3481 tgaacaagca aaacacacag gaagttgctg cttctcaggc acaagaacct gtaacggcac
     3541 aaactcttgt cagtgcaagc aatgataatg aaaatgatta tgattcttat acatttgaca
     3601 caggcctttt gatagtggaa agatgcgtgc tgcatgttgt caaaggtttt tacaaagata
     3661 taaattttgg caacctgtat gcaaacctta cacttgataa aaacgggctg ctgaaaatac
     3721 aatccaacaa atttgacttt gcagaaggca tctccacact caaagtgatg tgtgacctca
     3781 aaaaacatga ctacagcatc aggcttggtg taaaggatat taattctgac cttattgcag
     3841 gtactttgct cggcttgaaa aaagaaatct ccggcaaggc aatggggctc attgagctta
     3901 ataccgatga ttctttaaaa ctcaacggta gaatccgctt tgatatacaa aacggtacaa
     3961 tccaaaaagt agggcttgtg caatacgcgc taaattttgc tgcacttttt agaaatccta
     4021 taacaatgat aagcccttcc acaattgtag accttgttaa cataccggaa ggtacgttca
     4081 aaaaaattaa cggtgacctt gttatgaaag acaatgttgt ggaaaaaatt atgataaaat
     4141 cttctgctgc acagctcagc tcatttatta tcggcagata cgaaattgaa actggcgatg
     4201 caagcttaag aatttataca aagttcagca gcaaaaacaa aggctttgca ggatttttga
     4261 gaaacctgtc tcttaacagt cttgcaaaca aagtatctgt aacaaacaga aacgatgcca
     4321 actactatgc tgcagagctc aaaatgatac cggagcttga aataggtgaa gaagaaagcc
     4381 aggtattttt gaccaaagtt gacggtgatg tcatcaattt caacttcctg tcttctttga
     4441 aaaaaattaa ataatatgac cccgaagggc tataaactta tccttaaaaa taccgaataa
     4501 ataaatgtcc gaacaaaata gactttgtgg ggacggtgtt atgtagtgtc taaacaaagg
     4561 agaaaattat gagtttttca gtcaattcag tgtcatcaca cagcgtatcc cgttacgaaa
     4621 tgaaatcaca ataccgtaat gctggtatac ctgatgatgt tatttcacaa ggagaaacag
     4681 ctatacaaaa ctatgcgttt gaaaacggca ttaccgtgcc tgattttact tctcaagata
     4741 aagaaccgct ttttgaaatg aattcaaatg cccaggatac aggagtgcaa gcacagagtg
     4801 cacaatcaaa ccaatctgat ggcagtacta aaagattgaa atacaacgct taatgcttgt
     4861 tgaataaaaa aaacaaaaag gctatcctca gggcagaata gccttttcta atggaaatac
     4921 tttctggatg ataaatattt cctcacagtt taagcaataa ctatattata aacttttcgg
     4981 ttgatgaatc tatgactcac aagagtcaat ttgcctttaa aatggcgtta aacaaggttt
     5041 tcttttattg caagaatggc tgcctgggtt ctgtcttcaa cacacagttt ttgcaatata
     5101 tttttcaaat ggtttttcac agtatgtatg gacagcacaa gttcatctgc aatatctttg
     5161 tttgatttac ccctggctac aagttttagt atttcggttt ctctggctgt caaatcaaaa
     5221 cccgcattaa tattgtcttt tggctcagaa gactcctcaa ccctgctgct gtttaaaact
     5281 tccagaatat actgtgctat ggatgggtca atccatattg caccgtgcag tacagagctt
     5341 attacgctga caagttcatc tattttgatg tttttcatac agtatgcgtt tgcacctgca
     5401 ttaaacgctg aaagcaccag ttttttgtca ctaaacgagg tcagcattat aatttttaca
     5461 tccgggagaa tttcttttat tgctttggct gcgtcaatac cgttcataac cggcattgat
     5521 atgtccatga gcacgatatc ggctttgttg cctgctttaa tataatttag tgcagcaaga
     5581 ccgttatctg attctgccag ctcaatttct cccaggcggg ttctcaatcc gtatgcaata
     5641 gtttttctgg tatgttggta gtcttctaca agcaatatgt tcatggttgc tccttagtac
     5701 ccttaccggg atgttgcgac aacggaagtg tgattatgaa ttttgtgtat ttgttgattt
     5761 cactttcgac tgtgatttgg ccgttgtgca tatcaatcag tttttggcat acactgagac
     5821 caaaacccga acccagtttt cgctcaaggc ttttgccgga ataatatctg tcaaagataa
     5881 atttcaggtc ttcttttgca atgccgtttc cgttgtcttc tattgtgatt aaaacttcct
     5941 catcctcaaa tctggcagcg gcttttatat atttgttctc acccgaggtg ttgtcaattg
     6001 cgttggacaa aaggtttata aacacgcgtt ttatctgaaa caggtcagct tctataagtg
     6061 ttccgccttt atatatgttg tttacaaact caatattttt ttcggcaaga agcggtttga
     6121 gctgttcttt gcaatcttct atgatttcat aaaggtctgc tttttctatt gataatttta
     6181 gtttttcagg gtcaaaactg tatgagtcca gaataaggtt taccattttt aaaaggtgtt
     6241 cgttgttttt tgccaggctt tcagcaagct catattcatt tgtcagtcct atttctttga
     6301 atttttgaga tataaactca agtgactgcg attgagaaac caaaggtgtt ctcaaatcat
     6361 gggttaagtt ggagataaaa ctttctctca atttttcttt tgtttgcaga ttcaaaatca
     6421 tgtcattaaa gttttcatac aaatttttaa tgatttctat ttttgatgat gcatccagtt
     6481 taaaattaag attgcctttt ttaacctggt cagctgcttt agacaatgcc ataaccggtg
     6541 ttacaaaaac ccttttgata attaaaccaa tgacaaagct ggataatatt ccgacaagaa
     6601 gaataatcaa acttgtaaag atgctgtcaa tcatccctct aaaagggcca aatgccagct
     6661 caattgtgag ataagctgcg ttggagttgt cttcaccttt cagtgcaatt tcgcgtctgg
     6721 agttttcctt gtagtgtggt tttgctacac gggaaagaag cagaaaaatt tttttgggcg
     6781 gtccaaatgc catggggtca aaggcaacat tcttaaactc ataggcagcg tcgtctttat
     6841 tgaatctaag ctctattgta tacgggcctg tgggtcttaa aaggtcaaga cttacgggtt
     6901 ttgatatttt caatcccttt gttgagttgt caaacggtac aagagttacg caatacaggt
     6961 caaagttttt tctttcgtag aaagatacag gtgttttaat tggtttttga attacttctg
     7021 tattgtaatc gttcaatata ttttttatgt gtgaaaggtt tttgtcgttg ggcaggatat
     7081 aatacagttt tcggagtata tcgccttctt gcactttgag attcgtttta acagaatatt
     7141 ccaacctcat aagcccggtg ctcatggcac tttttgccat agcattgtgg aatttttcca
     7201 tctggctgtt gttccaggca aacatcaaaa ccagaggcaa aatagccgtg attaaaaaca
     7261 ctataaaaaa atatttggca aactttaaca tacttctgaa aatctgtttt actttaatat
     7321 cttaacctat tttgatgata acatcccatg gcacttataa aataaccccg aagagctata
     7381 tgaagttttg ttaagttatt gtaatatttt aatgagagaa gtattgagtt taacatacta
     7441 cttggccctg tatcccctac tcgttataca gggcttcttt cgttttatag ttctttgtta
     7501 ggatagattg tcagtttgtt tatcttaaaa ccgtatatgc tcattcttct tgcagtgttt
     7561 atgtctttta acggctcctg ctcatcaggg tttagaatgt acagaaggtc ttcggggtct
     7621 gctgttcctg tttgttttac ttcttcattt acccattgca ctatttctga taggtattcg
     7681 ttatagagtt tgcttaaact tctcaaatca ggttttttta ctgctttaaa tgtcattgta
     7741 tgatttgttt gagatgtaat ggttctttct tgtgaaggaa attttttaac taggctgaac
     7801 acttcaagat tgtcatacag ctcttcaaac tggagcgcat atacctctgc gtttcctgtg
     7861 gcatcataca acacgtcggc cagtgcctgt tccattgcca gagatttcag tttgttttct
     7921 gttgtcattt gtgattttgc gattatggct attttgctgc ctgatgcagc gtctttgcgt
     7981 tttgtacagc ataatgcttc aaaatctttt aaatctgata ttgatgcttg gttgcggaaa
     8041 ttgtgcgcca tttcttttag ataagcattc ctgtatgcag cagggataaa atcaattttc
     8101 ttttcaaaac ggtataatgc aggttttact attgcttctt tttcaaatgc attgcgttgg
     8161 tcatagtcgc atattacgtt gttttttagg atttcaggca tgttttgttt gaatttttta
     8221 taaaatgctt cttttacctc tgcggggtat gcacttttgt tggaaaaaat tatcaatgct
     8281 gatttgccgt atgtgtttat gtatttttcg agctcatctt tttgctctgt ttcgttaaag
     8341 tatagctctg caatctcgtg tatttcatca cgggacaggt cttgtttgta tgtttcataa
     8401 agattgttga ttctttgagc atctactttt ttgtcttttt ttacaatgtt gagagtaaat
     8461 gtttttcctg ttttgtggga ttgcattatg ataggttctt cgcctctttc aaggtggtac
     8521 attgctgttt taacatcaga gttagacatc tcataaactg acgggtcttt tgtaaattca
     8581 tacaacgtgt cagccattgc agcttccaaa gccctgttgt atcttgcagt ttctggcagt
     8641 tcttctgtca caaattttct tactactgct gtttcttctg cagaaagcga ctggccgttt
     8701 aggttttttg tccaggctct tattgcactt tcagggagct tttctaaagc ggtatcatac
     8761 atgtcattgt agaagttttt gggtattgct tttactttgc cgtagatatg agaattgtac
     8821 gctgctttaa aatctttttt gtattgcgct tcatcaacag taggtgctga tggggcaagt
     8881 gtagttttga atttttcgat ttcttttacg cgctggtttt tgtctctcat aatctgtttt
     8941 ttgagctctt caaatgttcc tcgcgaaatt gccgtttgga ttttttcttg cgattttatg
     9001 atgttttcgc ccagctgttt tgcataatca gggtgtgttt gccagaattc tgtcattact
     9061 tctgattgga atctgctgaa ttcctgtgtg gagtataaaa gatcagccgg tttgtatatc
     9121 tgatttgacc tgagatgctg gctgaggtct tttatcaggt cactgctgtg gttccaggca
     9181 tctatcattg tgtagcgaag cggttctgag cctgctttca tccgtgaaat ataatctgtt
     9241 ctttcagcct gggacatatt tgcccagcga aaagcgagcc tttgcatgct tttaacatgc
     9301 aaagtatctc tatcagcctc tgacaggttt tcttggaata ttttcaagtt gttcgctgcc
     9361 cattttaaaa acaattcatc ctggctcaat ttgttagaac cgacttttga gtgttttctt
     9421 ggctctgttg gagtctcctg tggttcctgc tttgcggggt tgagcttttg ctgtgcgcgt
     9481 tgttcttttt taaacatttt gagcatatca agctctgtga gctggtctgc tatcatgtct
     9541 aatttctggt ttctggtaag ggaattccac cagttttcca ttttttctac agattttttt
     9601 gcgcgctctg ttctttctct gtcatcgagc gaatcccaga aggctctttg cccctgtgaa
     9661 attttgtcac ccacaatgtc tgcatagcct tcgcgtttat atcttaaaga ctgctggtat
     9721 tcaaattccg gcatttgtat gcccagtgct tttagtgtgg agccgtatac ataaggagag
     9781 tttggatttt taaatttgaa atccgcttta aaatcagggt caaggtcatt ttcaaggtct
     9841 ttgtttatct cgtcgatggt ctttgcctcn nnnnnnnnnn nnnnnnnnna ggtttttgtt
     9901 gttttttaaa gcgccctgtc cggacagctc aagcagctct ttattttctt tgtaagaagc
     9961 cagcataccg cgtgttgcac gggactgttc aggttcgata aggttttcaa aaagtttttc
    10021 tccatcaaat gcttttttga tatcctgtac attttgtgta ttttccagtt ttgaaaaagc
    10081 ccttctttgc gcttccaacg gggtaaggcg ggttttgtca tcgaggtttt caatgtatcg
    10141 tctgacagga tggggcattc tgtctttatt tgtcaggtag aatctgtcga gccctttgtc
//
LOCUS       DABS01000167            3776 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_26076, whole genome shotgun sequence.
ACCESSION   DABS01000167 DABS01000000
VERSION     DABS01000167.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3776)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3776)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3776
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..441
                     /locus_tag="CPT85_07670"
     CDS             <1..441
                     /locus_tag="CPT85_07670"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21587.1"
                     /translation="QRDISTSTVKVGDVEYFINPADVFIGTSNVIPKNSVYLGEVQEV
                     LEAVEGINAAMKIKIYKVITPDKNEYALDANVYWKGSTKIGGDLAAVSYYTKMPHYPG
                     DWKRGALQLVPTTIREMGHPTVIRAGDEVTFIINSDLSLYKPLN"
     gene            532..1479
                     /locus_tag="CPT85_07675"
     CDS             532..1479
                     /locus_tag="CPT85_07675"
                     /inference="COORDINATES: protein motif:HMM:PF13646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21588.1"
                     /translation="MADNKTLDFNIIASDCLIATDIDSAEVIGRLEALKQKYSEMELI
                     AIFNYFLKIEYRPDVLCWLIRAVDKYRDSSSLPILTELLLMKDHTPSADYTKDYYTNV
                     RVMCAKAISNLKDHNSVHAFLYCLNDKNENYKVRLSCADALGKLGDKYAVTTLMDVVS
                     DESEKSVYIRESAAVALGLIGDIRAVDSLVNILETKNGLMDKFTYLKEKVVEAICKLN
                     PNDGRVFKALKNSLGDENPQVRINAIEALMEYETDEAKALIKKMLKDEDDEVKVNAVI
                     ALYNIEGEDILNEIINDSQYSQVCKEEAQNILNNEQDYE"
     gene            1472..2161
                     /gene="queC"
                     /locus_tag="CPT85_07680"
     CDS             1472..2161
                     /gene="queC"
                     /locus_tag="CPT85_07680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011499339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="DAB21589.1"
                     /translation="MNNSAIILLSGGLDSVVSIAQAKSNGLEFVLALTFDYGQKSFKK
                     ELKASKEIAGFYNIKHEVIKLDWLKDITSTSLVAQCDVPDISVDALDNRQVTNESMKN
                     VWVPNRNGLFINIAASYADSFGYGYIVIGANKEEAATFSDNSEQFINDMNQVLKTSTN
                     EDIKVLAPLIGFDKNEIVKKAVELNAPLHLINSCYNDTHKHCGRCESCNRLKRALEHN
                     GYLNIIKELFE"
     gene            2184..2579
                     /locus_tag="CPT85_07685"
     CDS             2184..2579
                     /locus_tag="CPT85_07685"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21590.1"
                     /translation="MKSLFIEKEIKYIGSQLAPHWIYKNFHILGDAVVSFIGEMDVKI
                     TEMVDIEDVISDSPIYSKKMVSFIIEQFGISLSECVVRQRFLMCIIIEELRKIVGDKF
                     KIRRSGDDIFVNIDGXFQFLLPHNQLHLV"
     assembly_gap    2534..2537
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2752..3417
                     /locus_tag="CPT85_07690"
                     /pseudo
     CDS             2752..3417
                     /locus_tag="CPT85_07690"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2770..2793
                     /estimated_length=24
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    3487..3505
                     /estimated_length=19
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3636..>3776
                     /gene="rpsL"
                     /locus_tag="CPT85_07695"
     CDS             3636..>3776
                     /gene="rpsL"
                     /locus_tag="CPT85_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_207988.1"
                     /note="interacts with and stabilizes bases of the 16S rRNA
                     that are involved in tRNA selection in the A site and with
                     the mRNA backbone; located at the interface of the 30S and
                     50S subunits, it traverses the body of the 30S subunit
                     contacting proteins on the other side; mutations in the
                     S12 gene confer streptomycin resistance; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="DAB21591.1"
                     /translation="MPTIAQLVRKERKSSVDKTKSPALTNCPQRRGVCTRVYTTTPKK
                     PNS"
BASE COUNT         1280 a          594 c          753 g         1102 t
ORIGIN      
        1 cagcgtgata tctcaacatc tacagtaaaa gtgggggatg tggaatattt tattaaccct
       61 gcagatgtct ttattggcac atcaaatgtt ataccaaaaa attctgttta tctcggcgaa
      121 gtgcaagagg ttctcgaggc tgttgagggt atcaatgctg caatgaaaat aaaaatctat
      181 aaggttatta cacccgataa aaatgaatat gctcttgacg ctaacgtata ttggaagggt
      241 tctacaaaaa taggtggcga ccttgcagca gtttcgtatt atacaaaaat gcctcattat
      301 ccgggtgatt ggaagcgcgg tgctttgcag cttgtgccta caaccatcag agaaatgggg
      361 catccgaccg ttataagagc cggcgacgaa gttactttta ttataaacag tgatttgagc
      421 ctatataaac ctctaaatta atagtcgtaa tttttatgtg cctgtcaaca gttgatatct
      481 ttttgttttt tatttataaa tatcattaac aaacaagata aagcacgggt catggctgat
      541 aataaaactt tggattttaa tattatcgca tcggactgtc tgatagcaac agatattgac
      601 agtgcagagg ttattggccg tttggaggct cttaaacaaa aatattccga aatggaactg
      661 attgctatat tcaattattt tttaaaaatt gaataccgtc cagatgtttt gtgctggctt
      721 atcagagctg ttgataaata cagagattca tcttcgctgc ctattttgac agaattgttg
      781 ttgatgaaag accatacccc cagtgcagat tatacaaaag attactatac aaatgttcgt
      841 gtaatgtgtg ccaaggctat ttctaatctg aaagatcaca attctgttca cgcgttttta
      901 tactgcctca atgacaaaaa tgaaaactat aaggtgcgtt tgagctgtgc agatgcttta
      961 ggaaagcttg gtgataaata tgctgtaaca acattgatgg atgtagtttc agatgaatcg
     1021 gaaaaatccg tttatatcag agaatctgct gctgttgctc tcggtttaat tggtgatatt
     1081 agagctgtgg attctcttgt aaatattctc gaaactaaaa acggcttaat ggacaagttt
     1141 acttacttaa aggaaaaagt tgttgaagct atttgcaagc ttaacccaaa tgacggcagg
     1201 gtctttaaag ctttaaaaaa ttcgcttggt gatgaaaatc cgcaggtgcg tataaatgca
     1261 atagaagctc taatggagta tgagactgat gaggcaaaag cgttaataaa aaaaatgctg
     1321 aaagatgaag atgacgaagt caaggtcaac gctgttatag cgctatataa cattgaagga
     1381 gaagacattt taaatgaaat aataaatgat tctcaatact cacaggtttg caaagaagaa
     1441 gcacaaaata ttttaaataa tgagcaggac tatgaataac agcgcaatca ttttactttc
     1501 tggcggcttg gattccgtag tatcaattgc acaggcaaaa tcaaacggtt tggagtttgt
     1561 actcgctttg acttttgatt acggtcaaaa atcttttaaa aaagaattaa aagcttcaaa
     1621 agaaattgcc ggattttata acataaaaca cgaagttata aagcttgact ggcttaaaga
     1681 tattacaagc acatctcttg ttgctcaatg tgatgttcct gatattagcg ttgatgcgct
     1741 tgataacagg caggtgacaa atgaaagtat gaaaaatgtt tgggtgccta acagaaacgg
     1801 actttttata aatattgcag catcttatgc agattccttt gggtacggat atattgttat
     1861 tggcgcaaat aaagaagaag ccgctacgtt ttcagacaac tcagaacaat ttattaatga
     1921 tatgaatcag gttttaaaaa cttctacaaa cgaagatata aaagttttgg cacctttgat
     1981 aggttttgat aaaaatgaaa ttgtaaaaaa agcagttgaa cttaatgcac ctttgcattt
     2041 gattaacagc tgttataatg atactcataa acactgcgga agatgcgaat cttgcaaccg
     2101 tctaaaacgg gctcttgaac ataacggtta tttaaatata ataaaagaac tttttgagta
     2161 gattttaaca ggggacggag aaaatgaaat cgttatttat tgaaaaagaa ataaaatata
     2221 taggcagcca gcttgcaccg cattggattt ataaaaattt tcacattctt ggtgatgctg
     2281 ttgtttcttt tatcggcgag atggatgtaa aaattacaga gatggttgat atagaagatg
     2341 ttatctctga ttctcctatt tacagcaaaa aaatggtgag ctttattatt gagcaatttg
     2401 gtattagttt atcagaatgt gttgtaagac aacgtttctt gatgtgtatt attatcgaag
     2461 aattaagaaa aattgtaggg gataaattta aaataagaag aagcggcgat gatatatttg
     2521 ttaacatcga tggnnnnttt cagtttctat tgccacacaa tcaattacat cttgtttgat
     2581 acacacaggt cttaatattg atccaacagg tgctcctgtt gatgcatgcg ggcttacgac
     2641 tgaccttggt ataacggatg ttgaaacatt tgccaaaaat gtcatgaaac gatatattga
     2701 agaagatacc gaaatttcag aagctacaag caaggttagg ggagtataac tatggcgcgc
     2761 tcaagaaaan nnnnnnnnnn nnnnnnnnnn nnngtctctt tgattgttat tacttatttt
     2821 attaagagca tgtctcctga tgttgatgtt gagataggcg gggaagatac acaaaacact
     2881 tctgttgaag aatcttccga aagtgatgtc aaaaaagcaa tagatgaccg tttgagatgg
     2941 attcagatgg aagataacat gcccggtgtt tccaaaagag aagatggaac aactgcagag
     3001 gatgttatgt atgaatcttc tgacaaagat aaatccaaaa attcaaacga aaatgctgat
     3061 aaacaaaaac aagaaaacaa gcagaatcct gcggagcttg ctcctgtgga atatgtaaac
     3121 ccccagcagc atcagcccgt attgcagcca cctgttccgg cacaacctaa tgcacagccg
     3181 gctgcagagc cttttaaaat gtctaaagta tacgttggct cttatcctac aatagagcag
     3241 gcaatacaag cgcagaataa attaatgaat acttccatat cagtaagtcc gtttgttaaa
     3301 gaagtaaacg gcacatatgt tttgcaggca ggttcatatg ccaatgcagg caaggctgag
     3361 gctgtatcaa gagaaattaa ttcacttggt tttcatgcca gagttgttaa agaataaaat
     3421 actgtaaaac attactataa cttaataaaa acccgatgtt aaagttgaca tcgggttttg
     3481 tttgagnnnn nnnnnnnnnn nnnnnggttt gtgctgaatt ctgatttccg aaaaaggtat
     3541 gacgcgcggg gcgtcgttgc aaactccgca cagggctaag gtgttaaacc ctaaccaaat
     3601 taactattat aaaaatttat atacaaggag aaatcatgcc cacaattgca caattggtaa
     3661 gaaaagaacg taaaagttca gttgataaaa ctaaatcacc tgctcttaca aactgccctc
     3721 aaagacgagg cgtttgcaca agagtttata caactacacc gaaaaaacct aactca
//
LOCUS       DABS01000168           10477 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_7042, whole genome shotgun sequence.
ACCESSION   DABS01000168 DABS01000000
VERSION     DABS01000168.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10477)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10477)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10477
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            11..295
                     /locus_tag="CPT85_07700"
     CDS             11..295
                     /locus_tag="CPT85_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015077006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="DAB21576.1"
                     /translation="MPEMSLLYELSDFFKVMGDGTRIQLLWALEESEMCVGDLAVLLN
                     MTKSAVSHQLKVLRTAKLVRAEKKGKNVYYALNDHHVKSILEKALEHVCE"
     gene            complement(304..894)
                     /locus_tag="CPT85_07705"
     CDS             complement(304..894)
                     /locus_tag="CPT85_07705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018759337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose acetyltransferase"
                     /protein_id="DAB21565.1"
                     /translation="MNEKERMLAGLIYDATDKELEKERFAAEELYFKFNNLPPSKNEE
                     KLEILKQLFGKIGKNSYIRSTLYCDYGYNIEIGDNFYANHNLTILDCAKVKFGDNVFI
                     APNCGFYCAGHPIDAQERNTLVEYAKPITVGNNVWIGADVCVMPGVTIGDNTVVGAGS
                     VVIKDIPSNVLAAGNPCKVIRELTEADKYKYGKYKE"
     gene            949..3096
                     /locus_tag="CPT85_07710"
     CDS             949..3096
                     /locus_tag="CPT85_07710"
                     /inference="COORDINATES: protein motif:HMM:PF04333.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21566.1"
                     /translation="MKIFSHIHKINYQYKNINYNANQKRRKMLNIKKALAVWAVLLCL
                     NSNNVIALEAGVQKNKYPDYGYEFVGNDKFEKFNRKVFTFNGGLNKCVLRPVHTVWAS
                     VMPQYGMDRIMSATNNIEYPIRLVSTLVQRDFKASGTETVRFLTNTTIGLGGLYDPAK
                     KIFKIEPVQENMEQALAKCKVKQGPYLVIPILMSTSPRNIAGRILDAGLNPSSYIASP
                     VLAAVKAGILVNRTSYMQPISKMIESTYADPYDIMKKLYGIENHIKTANLDRADVIEK
                     TQKAFDENEISHTEVNEEEPNIVKVKNTVIEGSAQAQKVIIQPDDLKADMVLEDYNPQ
                     DPVTDSMRTALFDLPGINDSIWNELSLWNRCFAKRIRTGSVNIDPDKENYKYRYIMQK
                     DKNSPVAIVYPSTGEGITSHHSVVLAKLFFDAGYSVIIQGSHFQWEFVKSMPDTYKPG
                     IPSNDAKHLRMVTTQIIDSLQTKYKCKFQDNILIGTSFGALTSLFVAAKESQENTLNI
                     SKYIAINPPIELLYAMNSMDKNSEQWSENPSNLKERVALTAAKVIQIYNKKDEKNFKF
                     ESLPFSQEEAKLITGFIMHQKLSDLIFAIENSKSPDKKELYASIHNTNFQDYAKKYLL
                     SDDMTLKSLAYDCSLYSISDYLKKAENFRIYHTLDDYLINKKQLRTLKNYTGKKTVIV
                     SNGGHLGYLYRPEFIESLKKDITKSNALISENR"
     gene            complement(3099..3824)
                     /locus_tag="CPT85_07715"
     CDS             complement(3099..3824)
                     /locus_tag="CPT85_07715"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21567.1"
                     /translation="MKRLTAVVAALGAVIMMGSDAYCAEVKDAQYYFKQGNDIEWKNN
                     RLGAIDSYTEALKLNPDYVEARVARGKLYYFTGQYAKALEDFNYFYNKPNYGPTVYYE
                     FRINCKKKLGQYAEAVDDMYEVILAYGGNSRLLQDMMDTVNQHSDLEYKLKPVSHPEL
                     LAKYKPNAKKLRDYAKNCADDKSNAKNKEYADFFMEMASAMDPEVTHYSKVIYDTPDN
                     SAPARMSPTQDGAEVMDVDIQVK"
     gene            3971..>5327
                     /locus_tag="CPT85_07720"
     CDS             3971..>5327
                     /locus_tag="CPT85_07720"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21568.1"
                     /translation="MKITSLSYTVNNNYNVKNKKTVPVKYEANNFALSHKRDKFITFG
                     ALPNIKLKKFDIAAEKAKLLKQIDTILQSDTPETDLEDRLTDIIQKSLARARSILKRK
                     KVLLEEIQKVSESKILTKQQKSDRARAIQKEWNLVNKIKIDKNNIVKPNQKQKDENID
                     FRLINRFRRAISEDNFNLHSVFNDFYKELENIQTIEELNKKYPKIKTPQNPAHIVAKK
                     LESSLTRDFYEKFNDLYDSGQDVLLFKYVDSKLKELIKPIAQKYKLSEVSLYEKTAQS
                     FNKRIIDRFAKAKVEVGFSFIPEQRKNKIAQITDNDIKLLYTDFDDFVISVIKKHYLN
                     AQKLNEIQYTNANQTFNISSIHEPEYKFEKLPEKIKQLMVSSDAIEKAQRDYEHFNVE
                     QFKERLNYFANKEPGNNETIFEGIVAFDTCKFEKGDIDPLIKFLKELDDLSDGKISVE
                     QA"
     assembly_gap    5328..5397
                     /estimated_length=70
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5423..6334
                     /locus_tag="CPT85_07725"
     CDS             5423..6334
                     /locus_tag="CPT85_07725"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21569.1"
                     /translation="MNVIKNRFDAAIDILYANNLNNIANSCLKYRPESLQQDVISEAE
                     TVMSLINQNTKGLSINKAKLESGLLRWDTFNLYKKTEADNPIYLKAVKYAQLPGGKTD
                     IDKAGQYIINAEIVENYPQSLEYVRNSDVLSKIMEKAGDDKEAAIKCLCKFDDYTELN
                     NTDKNSLAKFQDLFDIKDTTQKYVLKHIIENMYVKNDTTLLIKSVKSDVAKGTELIKA
                     TITARAKQQILDKYKYPVCLEYMRSFEEALTNFASLQGSAGVKKIGRNNKSAQYQMEL
                     KLKDHDDRLFSIENNYYFDIFSEKGKH"
     gene            6448..6999
                     /locus_tag="CPT85_07730"
     CDS             6448..6999
                     /locus_tag="CPT85_07730"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21570.1"
                     /translation="MTLLHKLCEALGKNNKPIYTVMAIACGKGTVRPILSITDKKESP
                     DARKYAALRELMTEFIGVPTTLGLGLIGEGLAGMIAKKGSTKYKNANSVLSFLGICCA
                     AGYFVPKFCNIGMPPIMKKLMPSYDPNAPAPGESMQQNNLDTISKAPDVIAQPSKPAF
                     KSSSYNIYRVSENSAYFRAGMRV"
     gene            7003..7566
                     /locus_tag="CPT85_07735"
     CDS             7003..7566
                     /locus_tag="CPT85_07735"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21571.1"
                     /translation="MNVTPVQKTLINIRKVAANPKFAEFARSTVCAIAVETTLKASGR
                     PAFIYYDKHANKQSKKYAATKELLYQTFCLGLYLSLIKPFSKKTYGFLSKKLAAKNPE
                     DKRRLDLFDNFQNKINTAKDKTTKNKLENQLSHLLHTNKDYHFGKGLKEFSSIASTVF
                     ILALCAPILSQIILHPVMDAIFKNPKK"
     gene            7629..8143
                     /locus_tag="CPT85_07740"
                     /pseudo
     CDS             7629..8143
                     /locus_tag="CPT85_07740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007708539.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine methyltransferase"
     gene            8219..8866
                     /locus_tag="CPT85_07745"
     CDS             8219..8866
                     /locus_tag="CPT85_07745"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21572.1"
                     /translation="MVTTKPPSQVSGTEILASNNRAMLGRNVQTTTIRGVSSTNPYFR
                     EYSRLCNSGNFTIEEAKLLAKTFHDDTGLILHCPGNDVRNFNIALSSIADAVKSQTFP
                     KQIKHVMIGHGSGRAETEWITAGRGKPINILEYINSNKDIKAGDMVLVTCCETGGILN
                     PLRPGKGLPVDLSLTTLIPDSIGGPAKIVIAGQNKVGGHFTLPVSGNPATGLKLY"
     gene            complement(8937..9012)
                     /locus_tag="CPT85_07750"
     tRNA            complement(8937..9012)
                     /locus_tag="CPT85_07750"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(8978..8980),aa:Gln,seq:ttg)
     gene            9217..9483
                     /locus_tag="CPT85_07755"
     CDS             9217..9483
                     /locus_tag="CPT85_07755"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21573.1"
                     /translation="MDTSINAINSVSTSTQKTQAADKQSEKIKELAQEYDFDYFDVDN
                     DGKLSGTELTKLKSMFNSVDFDVDEDDAVDESAFNSALSEYKES"
     gene            complement(9480..9668)
                     /locus_tag="CPT85_07760"
     CDS             complement(9480..9668)
                     /locus_tag="CPT85_07760"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21574.1"
                     /translation="MKKNKLDEKWKVCSFCKYIKRCKTGQGRIIDLADNPVAYNDIGC
                     FDYEIYKKQFTGKQLGLF"
     gene            9754..>10477
                     /locus_tag="CPT85_07765"
     CDS             9754..>10477
                     /locus_tag="CPT85_07765"
                     /inference="COORDINATES: protein motif:HMM:PF13197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21575.1"
                     /translation="MNIGNAFTYFFKDNNWIKKLLIGGALLLPVEIGNVLNQTLQSVK
                     SSPTAMQDMGLVIIAAFIFAITGVITSLFVTGYFAVNTNLRIYKKDAILPEWSNWKNL
                     FLSGFKVFGGSFLYGVLYTILLLISFIILGGLTGALAGKNAAFLILTVLSVILFFITL
                     LFASAATIAFLTNLKFSSFFNFKLISTIVKKNTVKYIIFLASSAVLYGLAGLLGFLLL
                     KTIVLAIFIPFINMYICFVISEI"
BASE COUNT         3796 a         1782 c         1777 g         3052 t
ORIGIN      
        1 taaacctaac atgcctgaaa tgagcctttt atatgagctt tcagactttt ttaaagtaat
       61 gggtgacggt acacgcatac aactattatg ggcgctggaa gaaagtgaaa tgtgcgttgg
      121 cgaccttgca gtacttttaa atatgacaaa atcagcggta tctcaccagc tcaaagtttt
      181 aagaacagca aaactcgtac gtgccgaaaa aaaaggcaaa aatgtttatt atgccctaaa
      241 cgaccaccat gtaaaatcaa tacttgaaaa agctctggaa cacgtatgtg aataaagcaa
      301 cgattattct ttatattttc cgtatttata tttatcagct tctgtcaatt ctctaataac
      361 tttacacggg tttcctgcag ccagtacgtt tgagggaata tcttttataa caacactgcc
      421 ggcacctact actgtattat caccgattgt tacaccgggc ataacacaga catctgcgcc
      481 tatccaaaca ttgttgccta cggtaatagg tttagcatat tctacgagtg tatttctttc
      541 ctgtgcatca atcggatgtc cggcgcagta aaaaccgcaa ttaggtgcta taaaaacatt
      601 gtcgccaaat tttacttttg cacaatccaa aattgtaagg ttgtgatttg cataaaaatt
      661 atcacctatt tctatgttat agccgtagtc gcaatataat gtagagcgaa tgtaagaatt
      721 tttgccgatt tttccaaaga gctgttttaa tatttcgagc ttttcttcat tttttgaagg
      781 gggaaggttg ttaaatttaa aatataattc ctcagcagca aaacgttctt tttcaagctc
      841 tttatcagtt gcgtcgtaaa taagtcctgc aagcattctt tctttttcgt tcatatacac
      901 ctcgttttca tttttaattt atatcttaca ataataccct tttgtgcaat gaagatattt
      961 tctcatattc ataaaataaa ttatcaatat aagaatataa attataacgc aaatcagaag
     1021 aggagaaaaa tgcttaatat caaaaaagct ctggccgtat gggccgtttt gttatgccta
     1081 aattccaata acgtaattgc attggaagct ggagtacaaa aaaataaata tcctgattac
     1141 ggctatgagt ttgtcggtaa tgataagttt gaaaagttta acagaaaggt ttttaccttt
     1201 aacggagggt tgaacaaatg tgttttgcgt cctgtccata cagtttgggc atctgtaatg
     1261 ccgcagtatg gaatggacag aataatgagc gcaacaaaca atattgaata ccccataaga
     1321 ctcgtgagta cgcttgttca aagagatttt aaagcgtcag gcacagaaac tgtacgtttt
     1381 ttaacaaata ctactatagg gcttggcggt ctttatgacc ctgcaaaaaa aatttttaaa
     1441 attgaacctg tacaggaaaa tatggaacaa gctcttgcaa aatgtaaagt gaaacaaggg
     1501 ccttatcttg tcattccaat actaatgtca acaagcccca gaaacattgc ggggagaatt
     1561 ctggacgcag gacttaaccc gtcatcatac atagcaagtc ctgtgctggc ggcagtaaaa
     1621 gcaggcattc ttgtgaacag aacttcttat atgcagccaa taagcaaaat gattgaatcc
     1681 acatatgctg acccctatga cataatgaaa aaactttacg gcatagaaaa ccatatcaaa
     1741 acagcaaatc ttgacagggc tgacgttata gaaaaaacgc aaaaagcatt tgacgaaaat
     1801 gaaatttctc atacagaggt taatgaagaa gagccaaata tcgtaaaagt aaaaaataca
     1861 gtaatcgaag gaagtgctca ggcgcaaaag gtaattattc agccggatga tttaaaagca
     1921 gatatggtat tagaagacta taacccgcag gaccccgtta cagactcaat gagaactgca
     1981 ctttttgatt tacctggcat aaacgactct atttggaatg aactttcttt gtggaacagg
     2041 tgttttgcaa aaaggataag aaccggatct gtaaatatag atcctgataa agaaaactac
     2101 aaatacagat atattatgca aaaggataaa aattcacctg ttgccatagt ttatccatca
     2161 acaggtgaag gcataacctc ccaccacagt gtggtgcttg caaaactctt ttttgacgcg
     2221 ggttattctg taattataca gggcagccat tttcaatggg agtttgtcaa aagcatgcct
     2281 gacacctaca aaccgggtat tccatcaaac gatgcgaaac atttgagaat ggttacaact
     2341 caaataattg attcgcttca aaccaaatac aaatgcaaat ttcaggacaa tattcttatt
     2401 ggcacatctt ttggtgcgtt aacaagtctt tttgtagcag caaaggaatc tcaggaaaac
     2461 acactcaaca tatcaaaata cattgcaatc aatcctccca ttgagctttt atatgcgatg
     2521 aacagcatgg ataaaaacag tgaacaatgg agcgaaaatc cctccaatct aaaagaacga
     2581 gttgctctca cagctgcaaa agtaattcaa atttataaca aaaaagacga aaaaaacttc
     2641 aaatttgaat ctttgccgtt ttcacaagaa gaagccaagc ttattaccgg ctttatcatg
     2701 catcaaaaac tttctgattt gatttttgca attgaaaata gcaaatctcc tgataaaaaa
     2761 gagctatacg caagcatcca caatacaaat tttcaagact atgcaaaaaa atatcttctg
     2821 tcagacgata tgacattgaa atctcttgct tatgattgca gcttgtattc aatttcagat
     2881 tatcttaaaa aagcagaaaa ctttagaatc tatcacactt tagatgatta tttgataaac
     2941 aaaaaacaat tgcgcacact caaaaactac acaggtaaaa aaacagtaat tgtgagcaac
     3001 ggaggacatc tcggatactt atacagaccg gagtttattg aatcattaaa aaaagacatt
     3061 acaaagagca atgccttaat ttcagaaaac agataatttt attttacctg aatatcaaca
     3121 tccataactt ctgcaccgtc ttgagtgggt gacattctgg caggtgcact gttatcgggt
     3181 gtatcataaa tcactttgga ataatgtgta acttccggat ccattgcaga tgccatctcc
     3241 ataaagaaat cagcatactc tttgtttttt gcatttgatt tatcatcagc acaatttttt
     3301 gcataatctc tcagtttttt tgcattaggt ttatattttg caagcagctc aggatgagac
     3361 acgggtttga gtttatactc aagatcagaa tgctggttaa cagtatccat catatcttgc
     3421 aaaagcctgg aatttccacc gtatgcaaga attacctcat acatatcatc aacagcttct
     3481 gcatattgtc ccagtttctt tttgcagttg atacgaaact cataatacac agtcgggcca
     3541 tagttcggtt tgttataaaa ataattaaaa tcctctaatg ctttagcata ctgtcctgta
     3601 aaataataca atttgcctct tgctacacgc gcttccacat aatcagggtt taattttaag
     3661 gcttcagtat atgagtcaat tgccccgagt ctgttatttt tccactcaat gtcgtttcct
     3721 tgcttaaaat aatattgagc atcttttacc tctgcacaat atgcatcaga gcccatcatg
     3781 ataactgcac ccaaagcagc aacaacagct gttaatcttt tcatatctat cctttctttt
     3841 tagtaaagag ttctataatt ttactatacc tgatatgctt atggaacatt gtgtaaagaa
     3901 attgtagaaa taattaataa tgcgcaaaaa atttttttga tggattttaa aataaacaca
     3961 tggaattaat atgaaaatca caagcctatc ttacactgtt aataacaact acaatgttaa
     4021 aaataaaaaa accgtgcctg taaagtatga agcaaataac tttgcactat cacacaagcg
     4081 ggataaattt ataacatttg gcgcactgcc taatatcaaa ttaaaaaaat ttgacattgc
     4141 ggcagaaaaa gccaaacttc ttaaacaaat tgatacaata ttgcaatcag atacacctga
     4201 aactgacctt gaagacagac tgactgatat aatacaaaaa tcactggcca gagctcgcag
     4261 cattcttaaa cgaaaaaagg ttctacttga agaaatacaa aaagtcagtg aaagcaaaat
     4321 tctgacaaaa cagcaaaaaa gtgaccgagc cagagccatt caaaaagaat ggaatcttgt
     4381 taataaaatt aaaattgata aaaacaacat agtcaaacca aaccaaaagc aaaaggatga
     4441 aaacattgat ttcaggctca ttaatagatt tagaagagca ataagtgaag ataattttaa
     4501 tctacattca gtatttaatg atttttacaa agaacttgaa aatatacaaa caatagaaga
     4561 gctcaataaa aagtacccca aaataaaaac accgcaaaat ccagcccaca ttgttgccaa
     4621 aaagctggaa tcatctttaa cacgagactt ctacgaaaaa tttaatgact tatatgacag
     4681 cggacaagac gtgctgcttt ttaagtatgt tgattcaaag ctcaaagagt tgataaaacc
     4741 aatcgcacaa aaatacaaat taagcgaagt atctttgtat gaaaaaacag cacaaagctt
     4801 taataaaaga ataattgaca ggtttgcaaa agcaaaggta gaagttggat tttcttttat
     4861 cccagaacaa agaaaaaata aaattgcgca aattacagac aatgatataa aactactgta
     4921 tacggatttt gatgattttg taatctctgt tataaaaaaa cactacctca atgcccaaaa
     4981 gctgaacgaa atacaatata ctaatgctaa tcaaacattc aatatctcat cgattcatga
     5041 accagaatat aaatttgaaa agcttccgga aaaaatcaaa cagcttatgg tatcttcaga
     5101 tgcaatagaa aaagcacaaa gagattacga gcattttaac gtagaacagt ttaaagaacg
     5161 tttgaattat tttgcaaaca aagaacccgg aaacaacgaa actatctttg agggtattgt
     5221 tgcattcgat acttgcaaat ttgaaaaagg agatattgat ccgctaataa aatttttaaa
     5281 agaacttgat gatttaagtg atggcaaaat atctgtagaa caagcgannn nnnnnnnnnn
     5341 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnaat
     5401 agaacagaaa aaaaacgcag aattgaatgt aataaaaaac aggtttgatg cagcaattga
     5461 tatattgtat gctaacaacc tcaacaacat tgcaaactcc tgtctcaaat acaggccgga
     5521 atctttgcag caagatgtca taagtgaagc agagacagtg atgagtttga taaatcaaaa
     5581 cacaaaagga ttgtctatca ataaagcaaa gcttgaatca ggactcttga ggtgggatac
     5641 attcaatttg tataagaaaa cagaagcaga caaccctata tatttaaaag cagtcaagta
     5701 tgcacaattg cccgggggaa aaactgatat agataaagcg ggacaatata ttattaatgc
     5761 agaaattgtt gaaaattatc cgcaaagtct tgaatatgta agaaatagtg atgttctttc
     5821 aaaaataatg gaaaaagccg gagatgataa agaagctgca ataaaatgtc tctgtaagtt
     5881 tgatgattat acagaattga acaacaccga caaaaactct cttgccaagt ttcaggattt
     5941 gtttgatatc aaagacacaa cacaaaagta tgttttaaaa catattatag aaaatatgta
     6001 tgtaaaaaat gatactactt tgttgattaa atctgttaaa agcgatgttg caaaaggaac
     6061 agagctaata aaagctacaa ttacagcccg ggcaaaacaa cagatacttg ataaatataa
     6121 atatcctgtt tgtcttgaat acatgcgttc ttttgaagag gctttaacaa actttgcgtc
     6181 attgcaggga agtgctggtg taaaaaaaat aggaagaaac aataaatcag cacaatatca
     6241 aatggaattg aagcttaaag accacgatga caggcttttt tcgatagaaa acaattatta
     6301 ttttgatata ttttcagaaa aaggcaagca ttaatgctat tttggggtta aaaaaaattt
     6361 tttaaaaaaa gggttgaaat cagatttttt tgatttagac taattgtgta ataaaactga
     6421 acattaataa cagatagcgt aatacaaatg acacttttac ataaattgtg tgaggctctg
     6481 ggaaaaaaca acaagcctat ttacacagta atggcaatag cctgcgggaa aggtaccgta
     6541 aggccaattt tgagcataac tgataaaaaa gaatctcctg acgcaagaaa atatgctgcg
     6601 ctaagagaac taatgacaga atttatcggt gtgccgacaa ctctcgggct aggtttaata
     6661 ggcgaggggc ttgccggaat gattgcaaaa aagggcagca caaaatacaa aaatgccaat
     6721 tctgttttat cttttcttgg tatttgttgt gcagctggat actttgttcc aaagttttgc
     6781 aacattggta tgccgccaat aatgaaaaag ctaatgccgt catatgaccc taatgcaccc
     6841 gcacccggag aatcaatgca gcaaaataac cttgacacta tatcaaaggc gccggatgtt
     6901 attgcacaac cgtcaaaacc cgcttttaaa tcaagcagct ataatatata tcgcgtatca
     6961 gaaaattctg cttattttcg cgctggaatg agagtgtaga atatgaacgt cacacctgta
     7021 caaaaaactt taatcaatat aagaaaagtt gcagcaaatc ctaaatttgc agaatttgca
     7081 agaagcacgg tttgtgcaat tgccgtagaa acaactctta aagcatcagg acgaccggct
     7141 tttatttatt atgacaaaca cgcaaacaaa caatctaaaa aatatgcagc aacaaaagaa
     7201 ttgctttatc aaactttttg tctcggttta tacctgagcc ttataaaacc atttagcaaa
     7261 aaaacatatg gctttttgag caaaaagctt gcagctaaaa accctgaaga taaaagaaga
     7321 ttagatctgt tcgacaattt ccaaaacaaa attaatacag ccaaagacaa aacaacaaaa
     7381 aataaattgg aaaatcagtt aagtcatctt ttacacacaa ataaagatta tcattttgga
     7441 aaggggttaa aagagttcag ctctattgct tcaacagtat tcattcttgc tttgtgtgca
     7501 ccaatacttt cgcaaataat actccatccg gtaatggatg ctattttcaa aaatccaaaa
     7561 aagtaaattg cctcagtcct acacatatgc aataataact aaaggttatt aaaaaataag
     7621 agtgtattat gcaatataag actttttatg attctccttt aggcaagata accctggtag
     7681 cagatggaaa aaatcttgtt gggttatggc tggaaggtca aaaatatttt tgtgcacagc
     7741 cgacaaagaa atgcaagaaa acaattctct gccaatattt aaagacacta taaactggct
     7801 tgacagatac tttaaaggag aaaaaccaga cttaaaagag ctttcattag caccttacgg
     7861 taatgatttc aggcaagaag tatggaaaat tctttgcaaa ataccatacg gaaagctcac
     7921 tacctacggt gcaattgcaa aagagattgc actaaaaaga ggtatatcaa aaatgtctgc
     7981 cagagcagtc ggaggtgcag taggacacaa ccccatttca ataataatcc cctgtcacag
     8041 agtaataggc actaacggta aacttaccgg ttatgccgga ggattgcatt taaaagtaaa
     8101 attactggaa catgaaaagg ttgatatgac agggttgtct taagagtaat agtagatatt
     8161 tgggaaaaat aagcttaata atattaagga atttagcaat tttcgtgtaa caaaagactt
     8221 ggttacaaca aaacctcctt ctcaagttag tggtacggag attttagcta gtaacaacag
     8281 ggctatgctg gggaggaatg ttcaaacaac aactataaga ggtgtcagtt ctactaatcc
     8341 ttattttcgt gaatattctc gtttatgtaa tagtggtaat tttactatag aagaagctaa
     8401 attactggca aaaacatttc atgacgatac tggattgata cttcattgtc ctggtaatga
     8461 tgtacgtaat tttaatatag ccttatcttc aatagcagat gctgttaaat ctcaaacttt
     8521 tccgaaacaa ataaaacatg taatgattgg tcatggttcc ggtagagcag aaacggaatg
     8581 gattacggca ggcagaggta aacccattaa tattttagaa tatattaatt ctaataaaga
     8641 tattaaagcc ggggacatgg ttttagtaac gtgttgtgaa actggaggaa tattaaatcc
     8701 gttaagaccg ggaaaaggtt tacctgtgga tttaagctta acaactttaa ttccagatag
     8761 tataggaggt cctgctaaaa tcgtaattgc agggcaaaat aaagtagggg gccattttac
     8821 gctacctgta tctggaaatc cagcaacagg tttgaagtta tattaattct caaactaaac
     8881 gtaaaaatac aatgcacctt ccgaatgcaa caaaaaagac cctttcgggt cttagttggc
     8941 tggggcggaa ggattcgaac ctccggaatg gctggaccaa aaccagctgc cttaccactt
     9001 ggcgacgccc cattgcgtct gtattatata tagtataaag cacatgatga catgtcaaga
     9061 agatttatat cgtttattta tattaaaaag atttagtata gctctttggt gttatttatt
     9121 gttaaaaatg taaaaaatag tactctttag tgattttctc aatccaaaaa attgtttata
     9181 tataagtaga aaaaatatta aaggagatat caaattatgg atacatcaat caatgcaatt
     9241 aattctgtca gcacctcaac acaaaaaaca caggctgctg ataagcaatc tgaaaaaatt
     9301 aaagaacttg ctcaagaata tgattttgat tactttgatg tagacaatga cggtaaactc
     9361 tctggtacag agctaacaaa acttaaatca atgtttaatt ctgtagattt tgatgttgat
     9421 gaagacgacg ctgtggatga atcagcattc aattctgcat tatcagaata caaagaaagc
     9481 taaaaaagcc cgagctgttt gcctgtgaat tgttttttat aaatttcata gtcaaaacaa
     9541 ccgatatcat tatatgcaac aggattgtcg gcaaggtcaa ttatccttcc ctgtcctgtt
     9601 ttgcagcgtt taatatactt acaaaaactg caaaccttcc atttttcatc aagtttattt
     9661 tttttcatat cattatttta aatcaaaaag atgattcttt aagcataaga taaatgctac
     9721 actccaaata gttataataa ttgggagttt attatgaata ttggaaacgc atttacttac
     9781 tttttcaaag acaacaactg gataaaaaaa ttgttgatag gcggagcttt gctgctccct
     9841 gtagaaatcg gcaatgtatt aaaccagaca cttcaatctg taaaatcctc acctacggca
     9901 atgcaagata tggggttggt tattattgcc gcattcattt ttgcaattac aggtgtgatt
     9961 acatctcttt ttgtaaccgg ttactttgca gttaacacaa atttaagaat atacaaaaaa
    10021 gatgcaatac ttcccgagtg gtcaaactgg aaaaacttat tcctttcagg gttcaaggta
    10081 tttggtggtt ctttcttata cggagtattg tataccattt tattacttat ctccttcata
    10141 atacttggag gccttaccgg agcattggca ggaaaaaatg cagcgttctt aatcttaacg
    10201 gtgttatcag taattttatt ttttataaca cttctttttg catctgctgc aaccattgct
    10261 tttttaacta accttaaatt ttcatctttc ttcaacttca agttgatatc aactattgtt
    10321 aaaaagaata ctgtaaaata tattattttc cttgcctcaa gcgctgtatt atatggtctt
    10381 gcagggttgc ttggcttttt attactaaaa accattgttc ttgcaatatt tataccattt
    10441 atcaatatgt atatttgttt tgtgataagc gaaatta
//
LOCUS       DABS01000169            3656 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_6358, whole genome shotgun sequence.
ACCESSION   DABS01000169 DABS01000000
VERSION     DABS01000169.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3656)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3656)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3656
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..904
                     /locus_tag="CPT85_07770"
     CDS             <1..904
                     /locus_tag="CPT85_07770"
                     /inference="COORDINATES: protein motif:HMM:PF14697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21533.1"
                     /translation="KEVERLVTLYSSAGCMFFDLCAKPEIVDAAKRGLQRAGITKDRY
                     LCVSVGIDGDPHITKAVIDQQKCVKCGKCKKICPHDAIIELDKYKVKKERCIGCTQCF
                     NKCPKQAIEMVTQLQDYKEVLPKLIEKGIDCIEFHAISEDEQDVDEKWQQINDYFDGM
                     LCISLDRSELGDKKLKERVKRLIAKRKPFTTIIQADGIAMTGGTDDYATTLQSVATAQ
                     LFQNENIPAYIMMSGGTNTKSTELAKQCKVQPHCLAVGSYARKIVKDYLERDDFYENK
                     EAFNEAVKIAKNLIDTSLRNMVND"
     gene            897..1655
                     /locus_tag="CPT85_07775"
     CDS             897..1655
                     /locus_tag="CPT85_07775"
                     /inference="COORDINATES: protein motif:HMM:PF13419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21534.1"
                     /translation="MISLTVNNSKINDIDTVLFDKDGTFIDLHYFWGKMTTMRCDEII
                     QTYSMPLSLHHELCLCLGYDTKTQKMLKDGITALYSRTKIIEIFRSDLKKYGVNATQQ
                     EIEKIFDHISSVFYKNMQTYTKPIDSAVEFFKTLAQYDIKLGIVTSDSVESTQLTLKH
                     FGWEKYFGAVIGRESSAAHKESGIPAKMALEILQSNPTNTVMIGDAPMDYLAAKNADI
                     KTTILVATGQIEREELQQYCSYSVNSLKEVYINK"
     gene            2066..2695
                     /locus_tag="CPT85_07780"
     CDS             2066..2695
                     /locus_tag="CPT85_07780"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21535.1"
                     /translation="MNVRPQKLATILTKPRVLVPTVFMAVGTGKTMLDYEKAKPEKKR
                     RIFAKDSAMLLGSLAGFLLMKAPAKRLCGKESNIPKNILQSTSYVIKQSVAGALSTLG
                     GIVGAVCGNEVVHRFVLDKPYFNEKPKVEPQEETANKKTGKEDAKAKDSFDKFFAENK
                     VFEKFNYANKHAAQTAGFFLSLPGVSNFSAPPXAYDCTYRYVCCKNGRL"
     assembly_gap    2642..2643
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2649..2954
                     /locus_tag="CPT85_07785"
     CDS             2649..2954
                     /locus_tag="CPT85_07785"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21536.1"
                     /translation="MIALTGMSVAKMEGYNNKIKRTSKELIANCLIPSLLVSAVSLAV
                     SKKTGYIKYPAILASLVAGSFAGTKLADLYQNKLDETIDSIDFQRITFKRNVKQSAD"
     gene            complement(2951..>3656)
                     /locus_tag="CPT85_07790"
     CDS             complement(2951..>3656)
                     /locus_tag="CPT85_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019376497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="DAB21537.1"
                     /translation="QEAVNVAENFNAQLEITGLVLTKLDGDSRGGAALSVVYCTQKPI
                     KLTGMGEKLDALQDFYPDRMATRILGMGDIVSLVEKAQENFDAKQAQELEKKMRKAEF
                     SFNDFLNMQKTMKNLGSMDQILGMLPIPGLKKDDRQLIANEGEKQLKKIEAFIQSMTP
                     EERDNPAIINTSRKKRIAKGCGMELAQINQYISQFEQMRKMMKGFTKISDKMKSGKMK
                     MPKMPKGFGKHGKLPF"
BASE COUNT         1232 a          640 c          713 g         1069 t
ORIGIN      
        1 taaggaagtt gaaaggcttg taacattata ttcttcagca ggttgtatgt tttttgacct
       61 gtgtgcaaaa ccggaaattg ttgatgcagc aaaaagagga cttcaaagag ccggaataac
      121 aaaagaccgc tatttatgcg taagtgtggg catagatgga gacccccata tcacaaaagc
      181 tgtcattgat cagcaaaaat gtgtaaaatg cggcaaatgt aaaaaaatat gccctcacga
      241 tgcaatcata gaactggata aatataaagt aaaaaaagaa cgctgcattg gctgcacaca
      301 atgttttaac aaatgtccaa aacaagcgat agaaatggtt acacagctgc aagattacaa
      361 agaagtcctg ccaaaactaa tagaaaaagg cattgattgc atagagtttc acgcaatttc
      421 agaagacgag caagatgttg atgaaaaatg gcagcaaatc aatgattatt ttgacggaat
      481 gctgtgcatt tctctggacc gttcggagct tggcgacaaa aaattaaaag aaagagtaaa
      541 aaggcttatt gcaaaaagaa aaccttttac aactattatt caagctgacg gtatagcaat
      601 gacaggcggc actgacgatt acgcaacaac attgcaatca gtagcaactg ctcagctgtt
      661 tcaaaacgaa aatattcctg cgtacataat gatgtcaggc ggaacaaata ccaaatcaac
      721 agagcttgca aaacaatgca aagtacaacc tcattgcctt gcagttggtt catatgctcg
      781 aaaaattgta aaagattatc ttgaaagaga tgatttttac gaaaacaaag aggcttttaa
      841 tgaagctgta aaaatagcta aaaacttgat tgatacatcg ctaaggaata tggtaaatga
      901 ttagcctgac agttaacaac agcaaaatta acgatataga cacagtattg tttgataaag
      961 acggtacgtt tattgacctt cattatttct ggggcaaaat gacgaccatg aggtgcgatg
     1021 aaataataca aacatattct atgccgttgt cattacacca tgaattgtgc ctatgtctgg
     1081 gatatgatac aaaaacacaa aaaatgctca aagacggcat taccgcattg tattcacgca
     1141 ctaaaatcat agaaatattc cgcagtgacc tgaaaaaata cggcgttaac gcaacccagc
     1201 aggaaataga aaagattttt gaccacataa gttcagtgtt ttataaaaat atgcaaactt
     1261 atacaaagcc aatagattct gcagtagagt tttttaaaac acttgcgcaa tacgacataa
     1321 aactaggtat tgtcacatct gattctgtcg aatctacaca gctaaccctt aaacattttg
     1381 gatgggaaaa atattttggc gcagtaatag gaagagaatc ctctgctgct cataaagaaa
     1441 gcggcatacc tgcaaagatg gcgcttgaga ttttacaatc aaatccaaca aacactgtta
     1501 tgataggaga tgcgccaatg gattatctgg cggccaaaaa cgctgatata aaaacaacaa
     1561 tacttgttgc taccggccaa attgaaagag aagaactcca acaatattgc tcatattctg
     1621 ttaatagcct aaaagaggtt tatatcaata aataaacaaa aaaaagctct aatttatcat
     1681 tagagcaata cttttaatag gaagggaagg ttaggaagtt aggtaggtta gtgttagtgt
     1741 gaaagtctct tttatatttt gtgtttattt aatgttcttg ttgattttgt cttacatata
     1801 tataaagtat atacgaatct caaaattgca gacttgagta tatactgtta catttcttta
     1861 caattcgcct gtaggaggca aaaaaattaa tttagatgtt taattatatt tgcgcaagag
     1921 tgtccgagaa aaattcgtga taaggaacga agtgacgtga acgaattttt tgagtgacaa
     1981 ttgaaaaggt gagtcaatga cggctcgagg agtcgagtcg gcagtgacga cactagatta
     2041 gagtttacaa agacagttat agaaaatgaa cgtaagaccg caaaagctag ccacaattct
     2101 aacaaagcca agagttcttg tccctaccgt gtttatggct gtgggaacag gcaaaactat
     2161 gctggattat gaaaaagcaa aacctgaaaa gaaaaggcgt atatttgcaa aagacagtgc
     2221 aatgcttctg gggtctttag ccggcttcct tcttatgaaa gcgcctgcaa aacggttatg
     2281 cggaaaagaa tcaaatattc caaaaaatat tctgcaaagc acaagttatg ttatcaagca
     2341 gagtgttgcg ggtgctttgt ctactctggg cggtattgtc ggtgctgtgt gcggaaatga
     2401 agtggttcac aggtttgtgc ttgataaacc ttatttcaat gaaaagccaa aagttgaacc
     2461 tcaagaagag actgcaaata aaaaaacagg aaaagaagac gcaaaagcaa aagattcttt
     2521 tgacaaattt tttgcagaaa acaaagtttt tgaaaaattt aactatgcaa ataaacatgc
     2581 tgctcaaaca gccggatttt tcctttcttt gccgggtgta agcaatttta gtgctccgcc
     2641 tnncgcctat gattgcactt acaggtatgt ctgttgcaaa aatggaaggt tataataata
     2701 aaattaaacg tacctcaaaa gaactgatag ccaactgctt gataccttct ttacttgtat
     2761 ctgcagtgtc gttggctgtt tcgaaaaaaa caggttatat taaatatcct gctattttag
     2821 cctctcttgt tgctggttct tttgcaggaa caaagctggc tgatttgtat cagaacaaac
     2881 tcgatgaaac tattgattcc attgattttc agcgtataac ctttaaaagg aatgttaaac
     2941 aatcagctga ttaaaaaggt agttttccgt gttttccaaa accttttggc attttaggca
     3001 ttttcatttt gccggatttc attttgtcgg aaatttttgt aaaacctttc atcatttttc
     3061 tcatttgttc aaattgagaa atatattgat tgatttgagc aagctccatt ccgcagcctt
     3121 ttgcaatacg tttttttcgg cttgtgttga taatcgcggg attgtctctt tcttccggag
     3181 tcatgctctg gatgaaagct tctatttttt tgagctgttt ttcaccttcg ttggcaataa
     3241 gctgtctgtc atcttttttc aagccgggaa tgggcagcat accgagtatc tggtccatag
     3301 aaccaagatt tttcattgtt ttttgcatgt ttaaaaagtc gttaaaagaa aattctgctt
     3361 ttctcatttt cttttcgagc tcttgagcct gttttgcgtc aaaattctcc tgcgcctttt
     3421 caacaagcga tacaatgtcg cccataccaa ggattcttgt tgccattctg tcagggtaaa
     3481 aatcctgtaa ggcatcgagt ttttcaccca taccagtaag tttaatcggt ttttgggtgc
     3541 agtaaacaac actcaatgct gcaccacctc tggaatcacc atccagtttt gtgagcacaa
     3601 gacctgtaat ctcaagctga gcgttaaagt tttcagccac attaacagct tcctga
//
LOCUS       DABS01000170            2908 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_14508, whole genome shotgun sequence.
ACCESSION   DABS01000170 DABS01000000
VERSION     DABS01000170.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..610)
                     /locus_tag="CPT85_07795"
     CDS             complement(<1..610)
                     /locus_tag="CPT85_07795"
                     /inference="COORDINATES: protein motif:HMM:PF13533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21499.1"
                     /translation="MNDEKNNEIKEETTNKTEAVDDTDEDNRPSYKKKRVIVPAITAI
                     VFFIVGIYFMVHAIHFQSTDDAFVEGHIVSIAPRVAGPVEQMLIDDNMPVKKGQLLIV
                     IDPNDYEVKLAQTKAKLAQAKASLNISEKDITKSESGLEESSHDVVSTSSKLDFAQKD
                     FKRYSSMYKEGISSKQDYDSSKTGLTVAQANHNSAIEKEKAAK"
     gene            complement(628..1080)
                     /locus_tag="CPT85_07800"
                     /pseudo
     CDS             complement(628..1080)
                     /locus_tag="CPT85_07800"
                     /inference="COORDINATES: protein motif:HMM:PF01047.20"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    1010..1019
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1200..1201
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1414..2553
                     /locus_tag="CPT85_07805"
     CDS             1414..2553
                     /locus_tag="CPT85_07805"
                     /inference="COORDINATES: protein motif:HMM:PF02321.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21500.1"
                     /translation="MSFDGNLGRIMKSSDQHFGSMMIPDYAQWGYQLPLTATYEIDIW
                     GQNRLKTKSIEKQLQIVRQQERASYIALTSAFASTYFNLIKTDKLIEIQKDIVKIQEE
                     IAQKTQKKYDNGLCTVNDVINEQKFLTSQKEMLNNLVHTKEVLTNQLRVYLSDSNKTI
                     ERTDCDALTVPEAIPDKFDSSIVEKRPDYIQAEDNIKRIGYDVKVAKKDFLPKFLIYG
                     QLGFNAYHWNSIFNRPAQLANAGIMPSFDFFTGGRKKAVLRLRKNQYEEAMHDYQKTI
                     LTGIQEVNDSCALVKTNLKNYRQSSERYRLENKKYILMTHKNTIGAASNLEVLYNKEQ
                     ELMAKSEEVANKINCLISTIGLYKASGGQDLFLLNTEANQEKEAI"
     gene            complement(2558..2884)
                     /locus_tag="CPT85_07810"
     CDS             complement(2558..2884)
                     /locus_tag="CPT85_07810"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21501.1"
                     /translation="MVVLIRKIEELQRKIVNYYFDYMTARECLIRSDELVAKRRNTFM
                     NSQELTDDQVIMADAFYREALNKQSKLRSDYLAKRSALEQVVGMDTMSQFEELLTKRE
                     ESEKAK"
BASE COUNT          923 a          503 c          498 g          972 t
ORIGIN      
        1 cttttgctgc tttttctttt tctattgccg agttatggtt tgcctgtgca acagtaagtc
       61 ctgttttgct tgaatcgtaa tcctgttttg atgaaattcc ttctttatac atagatgagt
      121 atcttttgaa atctttttgt gcaaagtcta gcttagagct ggttgaaaca acatcatgag
      181 atgactcttc cagtcctgat tcggattttg taatatcttt ttccgatatg tttaaggaag
      241 cttttgcttg agcgagtttt gctttggttt gtgcaagctt tacctcgtaa tcatttgggt
      301 cgatgacaat aagcagctgt ccttttttta caggcatgtt gtcatcaata agcatttgtt
      361 caacgggccc tgcaacacgt ggggctattg atacaatatg accttcaaca aatgcgtcat
      421 ctgttgattg aaaatgtatt gcatgcacca taaaatatat acctactata aaaaatacaa
      481 ttgcagttat agcgggtact attactcttt tctttttgta actcgggcgg ttgtcttcat
      541 cagtatcgtc tacagcttct gttttgttag ttgtttcctc ttttatctca ttattttttt
      601 cgtcgttcat tttatattcc tcattgatta tatttgcatt gtcactttgt ctttcatgtt
      661 taaaagcatt ttttcaagaa tatgcagtgt cttattcaaa tcttcgtcac tgattccgtt
      721 tgttgttatg gctcttagtt taaacattgt cggctgaatt tgctttctca tctctatacc
      781 tttttgagta atagagattt taaaaatttt tcttttgttt acgtcctcaa ttcttttaac
      841 aaggcctttt tcttcaagaa tattgatgat gcggcttatg tttggcctgt ctttataagt
      901 tatttctgaa atttggcgct ggtacaaatc tttgcctgcg tccataataa tagagagcac
      961 aagatactgc tctggtgtaa tttcaaattt ttgaacagca tattcctgcn nnnnnnnnnt
     1021 ggcaacaagc attgctccga cttttttgtt aagtaagttg ttggtttgtg tttcttgcat
     1081 ggtgtaaaat tttgttataa aatttcttgt gttattatca taacacaaga ataagaaacg
     1141 aaagataatt tttatgaaga aaatattagc aacattaata acacttttat ttgttctgcn
     1201 ntttttgctg catcaaaaaa ggagaaaaaa aacgatgaca attataaaat agaatatctt
     1261 aacatcagct ggtgggaaaa atataatgac cctgttttaa cagcttatat tcaagagctg
     1321 tatgacaaaa atcatgatct aaaaatagct gccctaaaag taaaagaagg cgaaaatatt
     1381 gttaaaatat cttttgcaaa cgagcttcct cagttgtctt ttgatggaaa tctaggcaga
     1441 ataatgaaat ccagcgatca gcatttcggc tcaatgatga tacctgacta tgcacagtgg
     1501 ggatatcaat tgccattgac tgctacatat gaaatagata tatgggggca aaaccgttta
     1561 aaaaccaaaa gtattgaaaa acagcttcaa attgtcagac aacaggaaag agccagttat
     1621 attgctctta catctgcatt tgcatccact tattttaacc ttatcaaaac agacaaactc
     1681 atagaaatac aaaaagatat tgtaaaaata caggaagaaa ttgcgcaaaa aactcaaaaa
     1741 aaatacgata acggtctttg tactgtaaat gacgtcataa atgaacagaa gtttttgaca
     1801 tctcaaaagg aaatgctcaa taatctggtg catacaaaag aagttttgac aaaccaacta
     1861 agggtttatc tttcggacag caataaaaca atagaaagaa cagactgtga tgctttaact
     1921 gttccggagg caattcctga taaattcgat tcgtcaattg ttgaaaaaag acctgattac
     1981 attcaagccg aagataatat aaaaagaatc ggctatgatg taaaagttgc caaaaaagac
     2041 ttcttgccaa agtttcttat atatggtcag ctcggtttta atgcttatca ctggaacagt
     2101 atatttaaca gaccggctca acttgcaaat gccggtataa tgccatcatt tgatttcttt
     2161 acaggcggca gaaaaaaagc agtattaagg ctgcgtaaaa atcagtatga agaagctatg
     2221 cacgactatc aaaaaacgat attaaccggt atacaggagg ttaatgacag ctgcgctctt
     2281 gtcaaaacaa atctaaaaaa ttacagacaa agctctgaaa gatacagact cgaaaataaa
     2341 aaatacattt taatgaccca taaaaataca ataggtgcag catcaaatct tgaagtgtta
     2401 tacaacaaag agcaggagct tatggctaaa agtgaggaag ttgcaaacaa aataaactgc
     2461 ttaatctcaa caatcggcct ttacaaggcg tctggcggac aggatttgtt tttgttaaac
     2521 acagaagcta atcaggaaaa agaagctatt taaaacctta ttttgctttt tccgattctt
     2581 ctctttttgt tagcagctct tcgaattgag acattgtgtc cattcccact acctgttcca
     2641 gagccgagcg ttttgcaagg taatcagatc ttaatttgct ctgcttattg agagcttcac
     2701 gataaaacgc atctgccata ataacctgat cgtcggtcaa ctcctgtgag ttcatgaatg
     2761 tgtttcttct tttggcaaca agctcatccg aacgtatcaa acactctctt gctgtcatat
     2821 aatcaaaata gtagtttact atttttcttt gaagctcttc tatctttctt attaaaacaa
     2881 ccatatcagc gtcgttgact ttggaaaa
//
LOCUS       DABS01000171           14265 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13322, whole genome shotgun sequence.
ACCESSION   DABS01000171 DABS01000000
VERSION     DABS01000171.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 14265)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 14265)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14265
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(1..1303)
                     /locus_tag="CPT85_07815"
                     /pseudo
     CDS             complement(1..1303)
                     /locus_tag="CPT85_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015424090.1"
                     /note="frameshifted; incomplete; missing stop; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
     assembly_gap    616..622
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    785..786
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1455..1763)
                     /locus_tag="CPT85_07820"
     CDS             complement(1455..1763)
                     /locus_tag="CPT85_07820"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21466.1"
                     /translation="MYQFGLNNRYISDYSPAERIKIKMYADAAKTVADPRKDFKKYYE
                     NFREVTAREEGKKAVRKYFALKNSIDNQFPYLHGFQFYPPVHNEDDIRGLLSFIGSLK
                     "
     gene            complement(1814..2674)
                     /locus_tag="CPT85_07825"
     CDS             complement(1814..2674)
                     /locus_tag="CPT85_07825"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21467.1"
                     /translation="MSLNINGLKTAFTKVNSKGASLLRKETSLDALKVAQEGVIVPQN
                     AKTYDAVRVGRNFKPDESYTDIFTFRDAGGNIVKRYTRQVDGKNIKETTKGFENIYPW
                     EKDLDEFGDEVLEISARKVRSHVRENGKISKITEDVFAVTDEAKPVVTHSQKIITRGE
                     DNIYKSTNYETFLLEQRQNGTKPSYIKNEYEIDKHANGYFDLTKSEASSPELKEIAQN
                     SYLLPYVSKTNKFAHRMSQAAIEDGNFILSPSVNLYKKTSSTAGFCSADDVYINLKSS
                     KDLSMPRXRQ"
     assembly_gap    1823..1824
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2743..3948)
                     /locus_tag="CPT85_07830"
     CDS             complement(2743..3948)
                     /locus_tag="CPT85_07830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015128830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aluminum resistance family protein"
                     /protein_id="DAB21468.1"
                     /translation="MNKIIEIAEEKVQEYFKRVDKIKEFNQNKVLEAFRKNKIGLEHF
                     ATVSGYGHDDMGREALDKTFADVFNTEAAIVRNHFVSGTHAIACALFGNLRHGEKLVS
                     VVGTPYDTMEEVIGTRGNYRASLMGHGVLYEEIPLVNNTDVDFEKLEKTIDKSVNMVT
                     IQRSRGYSTRKSLNIETTKKVIDIIKSQNPDCICFVDNCYCEFVEEKEPLEIGADIVA
                     GSLIKNPGGGIVETGGDIAGKQEFVEQAAYRLTAPGIGTEGGAMLNQTRLIFQGLFMA
                     PSIVADAVKGSILASQVFEDIGFISNPKPATQRTDLIQTIEFGKPEPLLAFCKALQHN
                     SPIESYLTPVPDCVPGYDDKLIMAGGSFIEGSTIELSADGPMREPXGGLNYAHVKIAL
                     DGVLKELGL"
     assembly_gap    2810..2811
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4047..5255)
                     /gene="pgk"
                     /locus_tag="CPT85_07835"
     CDS             complement(4047..5255)
                     /gene="pgk"
                     /locus_tag="CPT85_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001036338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="DAB21475.1"
                     /translation="MMKKSIQDLGDIKGKRALVRVDVNVPMDENKNVTDDTRIQAIIP
                     TVRALQEKGAKIILMAHLGRPKGEWKVEEFSLEPVAKYMSKVLGEDVLFVKSPVGEGA
                     DKELAELKDGQVALLENIRFYKAEEAKDDDMTFANELAKLGDFYVNDAFGAAHRNHTS
                     TAKLAKVLKPAVSGLLMEKEIRCLSQALDNPVRPFTAVVGGAKVSSKIGVLENLIDKV
                     DNLIIGGGMAYTFVKANGGKIGNSICEDDQMETAKAIEKKAADKGVKIIMATDVLATD
                     DFSGKGTNKITPVDAIPDGFEGVDAGPETQKAFADVIKSSKTILMNGPVGAFENPAFA
                     EGTKAVLEAIVEATKNGAVSVIGGGDSVSAAKQFCKAEDFTHVSTGGGASLEFIEGKV
                     LPGVAALDDK"
     gene            5516..6658
                     /locus_tag="CPT85_07840"
     CDS             5516..6658
                     /locus_tag="CPT85_07840"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21469.1"
                     /translation="MCAIQKINFGGDKLAPFATGFINQNRAYSAQTPAAATTGYNQKT
                     KKTYAFVSSAIALASLGAAGFAVYKGVKSKGKFSKNISELTEELKNAKSKIEEAANNL
                     KNTKNDLEKNINNVQNDVSNAGNKTQENINSLNYRIDNIPKPNFEVPGIYQTRKVNVY
                     GVEMNLGTIVSEITGKVEEKMRNILRTESTKRIFGLVPRTNKPPRYAIVRMPTSELVP
                     FTKAGGMAVVPKDLATNLAAVMNGHQKGELILDTPLYLGQAAQNQFYSKVANLSSETG
                     KFEGQYEYVKKIIDGDKTKTQVLATLNNVQEMFVPIHTEKGLVKEKVNVLITDKLESP
                     VDWNSLRKRLSKDLRKQIADKLKQNNAYETDFVRIVKNNETKEIXN"
     assembly_gap    6650..6651
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6789..8396
                     /locus_tag="CPT85_07845"
     CDS             6789..8396
                     /locus_tag="CPT85_07845"
                     /inference="COORDINATES: protein motif:HMM:PF08323.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21470.1"
                     /translation="MTYFSKFFTEQLYHSDESQFVLKALDKLDEKGNVIINPKTQKPE
                     KEYIKLGADAIIGNDWHTGPISAILRQLSTVKKFYGYDPQKADKLQNMPIITILHNVE
                     YKGSVGFSQERMFNIMFGEHAAKIVENAHMPDIAIKKNSTGLPQYLWNAMMTGRDVNP
                     QMMAASYSDLLVPVSEQYAVDIASHSGFGGSVHDIFKMRSRVFEYADQDYIKSIVLRN
                     GLEPKLVKDVKTLKGINNGCDTSNNILSAKVARQMEKDLELAPNSIKAYNKKQNILEW
                     HNQNKGVYVDKIVKEVETAKNSKGANNPLKLYMPELTDLSGVNADTPFFCLAGRIEDQ
                     KGVNIYAKGILEFYKNYKGTNYPVFYIQGIGANPKYMQYFLDAKTELAKTNPKAAKRM
                     VAAGLFSEPGRYDGCKMMSDFTPMPSWFEPFGLVHKENAKFNGSIPIPNEVGGLTANL
                     TNEINALFVKFQHRFDPKIDAVQINGQNLGNIFNKAVEIYNDKPKFEKIXQADHGWLV
                     KDGPIDQYAQALIDLKVFEPSITASVA"
     assembly_gap    8286..8288
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    8458..8459
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(8478..11000)
                     /locus_tag="CPT85_07850"
     CDS             complement(8478..11000)
                     /locus_tag="CPT85_07850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006317201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="DAB21476.1"
                     /translation="MKRSYIDYAMSVIVGRALPDVRDGLKPVHRRILFAMNELGMTPD
                     KPFKKSARIVGEVLGKYHPHGDSAVYESLVRMAQDFSTRYQTIDGHGNFGSVDGDSAA
                     AMRYTEARMHKITQSMLADIDCETVDFTPNFDGSLQEPAVLPVRLPMLLLNGVSGIAV
                     GMATNIPPHNLNEIVDGTIALIDNPEITVEGLMEHIKGPDFPTAATIVGLHDIKQAYM
                     TGRGSIKMRAVAQFEEIPGGGGRQARTAIIVTEIPYQVNKAMLIEKIAELVRDKKIDG
                     ISDLRDESDREGMRIVIELKRDAKPEVVKNNLFKYTQLATTFGVNMVALVGKQPRLLN
                     LYEVLNEFVEHRVEVVTRRTIFFLKKAKIRAHILAGLMIALGSLDEVIELIKKSKTTD
                     EARVGLMSRFGLDVDQANAILEMQLRRLTGLEQDKIKAEYEELKKKIAEYEAILADRQ
                     KVLNIIKEELTEDKEKYGDDRRTQIVPEADEMTIEDLTPNVPMAVFITRQGYLKRISL
                     DTFERQNRATRGKGGIKTKEDDDVDQFFTAMMHDKVLFFSSKGTVYSLNVYEFPEGGR
                     QAKGLPIINVLPLEQDEQITAVVPVSDFKSVSNLIMLTQKGYIKRISLDNFENIRKSG
                     IIAIGLEDGDTLCWVKQAQDNDEVIIGTSCGMAIRFPISDMRPLGRSARGVNSMKLRA
                     GDKLIGCDIVPRDYDADLLVVTSDGFGKRSKLSEFRPQNRGGIGLIATKFKSAASRLV
                     ALTIVEESDEIMVVTQNGVVSRIKADCISRQGRPATGVKIQNLMEGDTVCTINKIVDP
                     DSDADENADCNLPTETQAEDNSVQQSMLGGLQPETGEESTEE"
     gene            complement(11129..11434)
                     /locus_tag="CPT85_07855"
     CDS             complement(11129..11434)
                     /locus_tag="CPT85_07855"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21471.1"
                     /translation="MKNNSYKKNMSNNNMINPANYYNPFAKYNYVSKTRGVYIPKETQ
                     PLLNASDTGVQKSASIYSDNYDAETDLMLSMKDENGKNDLNSALLGFINRFLGSSDN"
     gene            11504..11887
                     /locus_tag="CPT85_07860"
     CDS             11504..11887
                     /locus_tag="CPT85_07860"
                     /inference="COORDINATES: protein motif:HMM:PF00636.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mini-ribonuclease 3"
                     /protein_id="DAB21472.1"
                     /translation="MEELNLKCYAHLGDAVYELFVREKVILLTSNLARMHKINTSLVR
                     ASFQCELLNVIGPYLTEKEADLIRRGRNLPSSSSRKTNQALHRIATGFEVLIGYLHLH
                     DRERLLKIFKLISDYIDSKDHIVTD"
     gene            complement(11884..13092)
                     /locus_tag="CPT85_07865"
     CDS             complement(11884..13092)
                     /locus_tag="CPT85_07865"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21473.1"
                     /translation="MNFLLSYXXAFPVLAILGIKQFMNRESLDKKTMFIIIFSLIFVL
                     CSLTYTLGRIDGDSFVRLSYVSYVFIFIVVPGLLFVNYKKISSVFINYLILLSFLGLI
                     AGVMYKFCFTLKSGFFINTRPQTVSSQLKNTGKLDIRNDEKYALEVITSFINKYKKPE
                     DTFLDMTNKGLLYYILDTKMLMPYVSYYNMVASSQAQNVVKNWKNNTPDVIFINDSSE
                     RIDNVYPSLRINAIYRAILLSGNYKLAKDHNDNALLYKAKHEFSDEEKALLDRYLASS
                     QLKYLPDTWGNSVKTLPLIGIEIPFVFQMMALDDSTIFNIHFVQPINGKDLELIYLNF
                     YTNKPAKYIMQVNDSNSTLFFESKNNKVLIPFDNYPSWLLNKKVTDISFKTDLKFNKK
                     PQIEFYKRKS"
     gene            complement(13034..14011)
                     /locus_tag="CPT85_07870"
     CDS             complement(13034..14011)
                     /locus_tag="CPT85_07870"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21474.1"
                     /translation="MSVFFTVGQLKDFYTGIAVFENYNKQLDVAFFFLYLLIYLIFIP
                     LYKMLKKYIFDFSTIKNHVSRNLFIAFIFILVIIAFGELFCNNQVFVDPHHQAEHLNT
                     FFMHKKFNMEYYKDIMLVHGGRDIAAGWIGANILGADNLYNYYCANAIFYNLLICIYF
                     LLCISVFTDGLLFLIPLAGLCIHDNLFILLGCYVLAFLFLVKDFLFKKPLLFLGLYIV
                     LSFCFGAFWTTIGMAWVISALPAAVYAFYEILRQKNACKNIVLMALLLLICLAFCYPT
                     LPYFVAQAFIYAKANLFSFGTIMPQINSNYIEFFIKLFXCFPCACNIGN"
     assembly_gap    13068..13069
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    14046..14092
                     /estimated_length=47
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         4568 a         2725 c         2410 g         4493 t
ORIGIN      
        1 tgaccgataa tcttgataga gcttttatta gcaccaacag taccgtctga acccagaccc
       61 cagaacatac agtttgtagt gccttcaggt tctgtaacaa tttcttcttc aacttttaaa
      121 gaaaggtttg taacgtcgtc ttcgatacct actgtaaagc cgtggaaacc attgttttca
      181 gcgtgtttgt agatagcgag aaccattgaa ggtgtaaatt ctttagaaga taaaccgtaa
      241 cgtccgccga taactctgat atctttgttt tccagagctg caacaacatc gatgtacaaa
      301 ggttcaccga tagaaccagg ttcttttgtt ctgtctaaaa cagtgatgcg tttaactgat
      361 ttaggcagtg cttcgttgaa gcgttttaca tcaaacggtc tgtacaatct aactttaacc
      421 aaaccgtatt tagttccgcg tgttgcattg aggtattcaa ttgtttcttc aatagtttca
      481 cagcctgaac cgatagcaac aattacatca gtagcatcag gcgcaccaac gtaatcaaac
      541 ggatgatatt gtctgcctgt tacagcagca actttatcca tgtattcctg aacaatatca
      601 ggtactgcat catatnnnnn nnctggaagt aaacatctgt gttttgagca cctactttac
      661 aaataggagc ttcgggtctc atagctctgt ttctgaattc ttcaatgtat ttaggttcaa
      721 ctaatttagc aatatcttcg taagagattt cttcgatttt gtgaatttcg tgagaagttc
      781 tgaanncgtc aaagaattgc aagaaaggaa cttttgattt gtaagttgca aggtgagcaa
      841 ctaaagccat atccatttct tcttgaacag agttggcagc caacattgca taacctgtgt
      901 tacggcagcc cataacgtct gtgtggtcac caaagattgc caatgattgt gcagctaatg
      961 cacgagctga aacgtgaatt acgtgcggaa gcatttcgcc tgctactttg tgcataacag
     1021 gaatcatcaa aagcaagcct tgagatgctg tatatgtaga agtcaaagca cctgctgcaa
     1081 gtgaaccgtg aacagcacct gctgcgccgg cttcagattg catttctgca actcttactt
     1141 ctttgcccca gatgtttttc ttgtgttgtg atgcccattc atcgacccat tcacccattg
     1201 tagatgaagg agtaataggg taaattgctg atacttcgct taatgcatac gcaacatgcg
     1261 cagcagcgta gttaccatca actgttattg ttttacctgg cataatataa ctacctcctt
     1321 attcttatac caataccaaa ctacatactt atatggtaat acaaacctat ttttaataca
     1381 aacaaaatag cgattttaca gcagattttt acaacaaaaa agctcccgtt ttgagagctt
     1441 tttaagaact tgtactattt caatgaacct ataaaactaa gcaatcccct aatatcatcc
     1501 tcattatgta ccggaggata gaattggaat ccgtgtaaat aaggaaactg attgtcgatt
     1561 gagtttttaa gtgcaaaata ttttcttaca gcttttttgc cttcttctct tgccgttact
     1621 tctctaaaat tttcatagta ttttttaaag tcttttctag ggtcggcaac agtttttgcg
     1681 gcatcagcat acattttgat tttgattctt tctgcaggac tgtagtcgct tatataacga
     1741 ttgttcaatc caaattgata catttctcta cgtataacac gctcattcca ttttgcatgg
     1801 ccaacctcgt gccctattgt ctnnctcttg gcatagacaa atcttttgaa ctttttaaat
     1861 tgatataaac atcatccgca ctgcaaaaac cagctgttga tgacgttttt ttatacaaat
     1921 tgacactagg agataatata aaattaccgt cttcaatagc ggcctggctc attctgtgag
     1981 caaacttgtt ggtcttgctt acatacggca ataaataaga attttgcgca atttctttta
     2041 actcagggga ggaagcttct gacttagtca gatcaaaata tccgtttgca tgtttgtcaa
     2101 tttcatactc atttttaata tatgaaggct ttgtaccgtt ttgtctttgt tcaagcaaaa
     2161 aggtttcgta atttgtactt ttataaatgt tatcctctcc acgtgttatt attttttgag
     2221 aatgcgtaac aacaggtttt gcttcatcag taacagcaaa aacatcttct gttattttag
     2281 aaatttttcc gttttctcgc acgtggctgc ggacttttct tgcggaaatt tccaaaactt
     2341 catccccgaa ttcatcaagg tctttttccc acggatatat attttcaaaa ccttttgttg
     2401 tttcttttat gttcttgcca tcaacctgtc ttgtataacg tttaacaata tttccaccgg
     2461 catccctaaa tgtaaaaata tctgtataag actcatccgg tttaaaattt ctgcctacac
     2521 gaacagcatc atatgttttt gcattttggg ggacaataac accctcttga gctactttta
     2581 aagcatcaag agatgtttct tttctcaata atgatgcacc ttttgaattt acttttgtaa
     2641 atgctgtttt taaaccgttt atgtttaagc tcataaaaca acctatattg actaacccgt
     2701 ttatataaaa acaaatcaat caaaaaaatt gcgtgcttaa gattaaaggc ctaattcttt
     2761 taaaacaccg tctaaagcaa ttttgacatg ggcataattc aacccgcctn naggctctct
     2821 catagggccg tcagcagaga gctcgattgt agacccttct ataaagcttc ctcctgccat
     2881 aataagtttg tcatcatatc ccggcacaca atctggaaca ggtgtaaggt atgattctat
     2941 aggagaatta tgttgaagtg ctttacaaaa agccagaagc ggctccggtt ttccaaactc
     3001 tattgtttgt atcaaatcag tcctttgagt tgcgggtttc ggatttgaga taaagccgat
     3061 gtcttcaaac acctgtgaag caaggataga gccctttaca gcatctgcaa caattgaagg
     3121 cgccataaaa agtccttgaa aaatcagtct tgtttggtta agcattgccc cgccttctgt
     3181 acctatgccc ggagctgtta atctgtaagc agcctgttca acaaattcct gtttgcctgc
     3241 aatatccccc cctgtttcga caattccgcc tccggggttt ttgattaacg agcctgcaac
     3301 aatatctgca cctatttcaa gaggttcttt ctcttccaca aattcgcagt agcaattgtc
     3361 aacaaaacag atacaatcag gattttggga tttaattata tcaatgactt tttttgttgt
     3421 ttctatgtta agagattttc ttgtagaata gcctcttgaa cgttgaattg taaccatatt
     3481 cacagattta tcaatagttt tttcaagttt ttcaaaatcc acatccgtat tgtttacaag
     3541 aggtatttct tcatacaaaa caccgtgtcc cataagagaa gctctatagt tgcctcttgt
     3601 gcctattact tcttccattg tgtcataagg cgttccgaca acagaaacaa gtttttctcc
     3661 atggcgaagg tttccgaaca aagcacaagc tattgcgtga gtacctgata caaagtgatt
     3721 tcttacaatt gcagcctctg tattaaaaac atctgcaaaa gttttgtcca gagcttcacg
     3781 ccccatatca tcgtgtccgt atccgcttac tgtagcaaaa tgttccagac ctattttgtt
     3841 ttttctaaat gcttctaaaa ccttattctg gttaaattct tttattttat caacgcgttt
     3901 aaagtactct tgtacctttt cttcggctat ttcaataatt ttgttcatat tcttatccct
     3961 tcttttttat aatatcaaaa aagaaaacaa aaacagcctc tcattttaat tttgagagac
     4021 tgttttttat aataaaaagt tatttcttac ttgtcatcca aagctgcaac gccaggaagc
     4081 actttacctt cgataaattc taaggaagca ccgccgcctg tagaaacgtg agtgaagtct
     4141 tctgctttgc agaattgttt agcagcagaa acagagtcgc caccaccgat aacagaaact
     4201 gcaccgtttt tagttgcttc aacaatagct tctaaaacag cttttgtacc ttctgcaaaa
     4261 gcagggtttt caaaagcacc aacaggtccg ttcatcaaaa tagtttttga agatttgatt
     4321 acatcagcaa aagctttttg tgtttcaggg cctgcatcaa cgccttcaaa tccgtcaggg
     4381 atagcgtcaa caggagtgat tttgtttgta cctttaccag agaaatcatc tgttgcaagc
     4441 acgtctgttg ccatgataat ttttacacct ttgtcagcag ctttcttttc aatagcttta
     4501 gctgtttcca tctggtcatc ttcacagata gagttgccga ttttaccgcc gttagctttt
     4561 acaaatgtat aagccatacc gccgccaata atcaggttat caactttatc gattaagttt
     4621 tccaaaactc cgattttaga agacactttt gcaccgccaa ctacagcagt aaacggtctt
     4681 acagggttat caagagcttg tgaaaggcat ctgatttctt tttccatcaa caaacctgat
     4741 actgcaggtt tcaaaacttt agcaagttta gctgttgaag tgtggtttct atgtgcagca
     4801 ccaaatgcat cgtttacata gaaatcaccg agtttagcaa gttcgttagc aaaagtcata
     4861 tcatcgtctt ttgcttcttc tgctttgtag aatctgatgt tttcgagcaa agcaacctga
     4921 ccgtctttta attcagccaa ttctttgtct gcaccttcac caacaggtga tttaacaaac
     4981 aatacatctt cgcccaatac tttagacata tatttagcaa caggttcaag agaaaattct
     5041 tcaactttcc attcgccttt aggtctgcca aggtgagcca ttaatataat tttagcgcct
     5101 ttttcctgca aagctctaac tgtagggatg atagcctgta ttcttgtatc atctgtaacg
     5161 tttttgtttt cgtccatagg aacgttaacg tctacacgta cgagagctct tttacctttg
     5221 atgtcaccca aatcctggat tgattttttc ataatacacc tcatgttttt tatccgtaca
     5281 agtttatttt cataaaaaca taataaatag taaagtaatt acaaaaatta tagacatgtg
     5341 tattaattga caaatgaaca tgcgtgtaat tataataaat atcagtttaa gctttgctta
     5401 aatgtgtgtt tttattactg catactacac aaatgtaaaa ctttttgatt ttattttgcg
     5461 ttttggggac gtaaaaatat tttgcattcc tgtgtaagaa aaagagggac tatttatgtg
     5521 tgcaattcaa aaaattaatt ttggcgggga caaactcgct ccgtttgcta ccggttttat
     5581 caatcaaaac agagcctact ccgctcaaac accggctgct gcaacaacag gctacaatca
     5641 aaaaacaaaa aaaacttatg cttttgtaag ctctgcaata gcacttgcct ctttgggggc
     5701 agctggtttt gctgtttaca agggagttaa gtcaaaaggc aaattttcca aaaatatttc
     5761 cgagctgaca gaagaattaa aaaatgcaaa atccaagata gaagaagctg ctaataattt
     5821 aaaaaacaca aaaaatgatt tggaaaagaa cataaataat gtacagaatg acgtctctaa
     5881 tgctggtaat aaaacacagg aaaacattaa ttctttgaac tatagaatag acaatatacc
     5941 aaaaccgaat tttgaagtgc ctggtattta tcaaacaaga aaagtaaatg tctatggtgt
     6001 ggaaatgaac cttggcacaa ttgtaagtga aattaccggt aaagttgaag aaaaaatgag
     6061 aaatatactc agaacagaat caacaaaacg tatattcggc cttgttccga gaacaaataa
     6121 accaccgaga tatgcaatag taagaatgcc gacttctgag cttgtaccct ttacaaaagc
     6181 aggaggaatg gctgttgtac caaaagattt agcaacaaac ctggctgcag ttatgaacgg
     6241 tcatcaaaaa ggtgaattga ttctggatac acctttatat cttggacagg ccgcacaaaa
     6301 ccagttttat tcaaaagttg caaacctttc ttctgaaaca ggaaagtttg aaggacagta
     6361 cgaatatgtc aaaaaaataa ttgacggaga taaaacaaaa actcaggtgc ttgcaacgct
     6421 taataatgtt caagaaatgt ttgtacccat tcatacagaa aaaggccttg ttaaagaaaa
     6481 agtaaatgtt ttaataactg acaaattaga atcacctgtt gattggaaca gtttgcgaaa
     6541 aaggctatca aaagatctaa gaaaacaaat tgcagataag ctcaagcaaa ataatgcata
     6601 cgaaacagac tttgtgagaa tagtcaaaaa taacgaaaca aaagaaattn naaattgaag
     6661 catacggaaa atacagaact gccttctacg agtccggcaa atttgattta tcagcaagag
     6721 cattaaatga aggtgaaaaa tttaacctat acagaaatga tacactttct tccggagaaa
     6781 ctgaaaggat gacttatttt tcaaaattct ttacagaaca gctttatcac tctgatgaaa
     6841 gtcagtttgt gttaaaagca ttggataaac ttgatgaaaa aggaaatgtg attatcaatc
     6901 ctaaaacaca aaaaccggaa aaagaatata taaaacttgg tgctgatgct attatcggaa
     6961 atgactggca tacaggcccc atatcagcaa tattaagaca actgtcaact gttaaaaaat
     7021 tctacggata tgatccgcaa aaagcagata aattacaaaa catgcctatt ataacaattt
     7081 tacacaacgt agagtacaaa ggcagtgttg gattcagcca ggaacgtatg ttcaatatta
     7141 tgtttggaga acacgctgca aaaatagttg aaaatgctca tatgcctgat attgcaatta
     7201 agaaaaacag tacaggacta ccgcaatatc tttggaatgc gatgatgaca ggacgtgatg
     7261 taaatccgca aatgatggcc gccagttatt ccgatctgct ggttccagtt tcagaacaat
     7321 atgcagttga tattgcctct cacagcggtt ttggcggctc tgttcatgat atattcaaaa
     7381 tgcgctcaag agtatttgaa tatgctgatc aagattacat aaaaagcatt gtcttaagaa
     7441 acggcttgga acccaaactt gttaaagatg tcaaaacact caaaggaatt aataacggct
     7501 gcgatacgtc gaacaatatt ctttcggcca aagttgcaag acaaatggaa aaagaccttg
     7561 agctggcacc aaattctata aaagcataca ataaaaagca gaatatatta gaatggcaca
     7621 atcaaaacaa gggtgtttat gttgataaaa tagtaaaaga agtagaaact gccaaaaatt
     7681 caaaaggtgc gaacaacccg ttaaaattat acatgcctga actcaccgac ttgagtggtg
     7741 taaatgcaga cacaccattc ttttgtcttg caggcaggat agaagaccaa aagggtgtaa
     7801 acatatatgc aaaaggcatt cttgagtttt acaaaaacta caaaggaaca aactatccag
     7861 tattttacat acaaggcata ggagcaaatc caaaatacat gcaatacttc cttgatgcaa
     7921 aaacagagct tgcaaaaaca aaccccaaag cagccaaaag aatggttgca gctggcttgt
     7981 ttagcgaacc tggaagatat gacggctgta agatgatgag tgactttact cctatgccaa
     8041 gctggtttga accatttgga ctggtgcaca aagaaaatgc aaaattcaac ggttctattc
     8101 ctattccaaa tgaagttggc ggtctgacgg caaatcttac aaacgaaata aatgctttgt
     8161 ttgtcaaatt ccagcacagg tttgatccca aaattgatgc agtacaaatt aacggtcaaa
     8221 atcttggtaa tatatttaat aaagctgtag aaatttataa tgacaaaccc aagtttgaaa
     8281 aaatcnnnca ggcagaccac ggatggcttg ttaaagacgg gcctatagac caatatgcac
     8341 aggcactgat agatttgaaa gttttcgagc cttcaattac tgccagtgtt gcataaaaac
     8401 agacttcaaa accatcaaac aaaaaagagt tctttttaag aactcttttt tgtatttnnt
     8461 tattaaactt cagattttta ttcttcagtt gattcttcac cggtttcagg ctgcaaacca
     8521 ccaagcattg attgctgaac agagttatct tctgcttgag tttctgtagg aagattacaa
     8581 tcagcatttt catctgcatc agagtccgga tcaacgattt tattgatagt acaaacggta
     8641 tcaccttcca taaggttttg tatcttaaca cctgttgcag gtctaccctg acgggatatg
     8701 caatcagctt tgattcttga cactacaccg ttttgagtaa ctaccatgat ttcatctgat
     8761 tcttcaacaa ttgtaagtgc aacaagtctt gatgctgcag atttgaattt cgttgcaatc
     8821 agtcctattc cgcctctgtt ttgaggtctg aattcagaga gtttagaacg tttaccaaag
     8881 ccgtcagatg ttacaacaag caagtctgca tcataatccc ttggaacaat gtcacagcca
     8941 attaacttgt caccggctct caatttcatt gaatttacgc cgcgtgcact tctgccaagc
     9001 ggtctcatat cactaatcgg gaatcttatt gccataccgc aagaagtacc gatgattact
     9061 tcatcattgt cctgagcttg ttttacccaa cagagagtat ctccatcttc aagaccgatt
     9121 gcaattatgc cgctttttct gatattttca aagttatcca gagaaattct cttaatataa
     9181 cctttttgtg taagcataat aaggttggaa acagatttga aatcgctaac cggtacaaca
     9241 gcagtgattt gttcatcctg ttcaagaggc agtacgttga taataggcag cccttttgcc
     9301 tgtcttccgc cttctgggaa ttcgtataca tttaagctgt atactgtacc tttagaagag
     9361 aagaatagca ctttatcatg catcattgca gtaaagaact gatcaacatc atcatcctct
     9421 tttgtcttta tgccgccttt gcctcgagta gcgcggtttt gacgttcaaa cgtatcaaga
     9481 gagattctct ttaagtagcc ctgacgagta ataaatactg ccataggcac gttaggtgtc
     9541 aaatcttcta ttgtcatttc atcggcttca ggaacaatct gtgttcttct gtcatcgccg
     9601 tatttttctt tatcttctgt taattcttct ttaatgatat taagaacctt ttgtctgtca
     9661 gcaaggatgg cttcgtattc tgcaatcttt ttctttaatt cttcatactc tgcttttatt
     9721 ttatcctgtt ccaagccggt taaacgtctc aattgcattt caagaattgc atttgcctgg
     9781 tcaacatcca gcccaaatct gctcatcaag ccgactctgg cctcatctgt tgttttggat
     9841 tttttaataa gctcaattac ttcatcaagg ctgcccaatg caatcattaa accggccaag
     9901 atatgagctc tgatttttgc ttttttcaag aagaaaattg ttcttcttgt aacaacttca
     9961 accctgtgct caacaaattc attcaaaact tcatacaggt taagcagtct cggttgttta
    10021 ccaacaagcg caaccatgtt cacaccaaat gttgtcgcca gttgagtata tttaaacagg
    10081 ttattcttaa caacttcagg ttttgcatca cgttttaatt caataacaat tctcatacct
    10141 tcacggtcag attcgtctct taagtctgaa atgccgtcaa ttttcttatc tcgaacaagc
    10201 tctgcaattt tttcaataag catagctttg ttaacctgat aaggaatctc agtaacaata
    10261 atagctgttc tagcctggcg gccgcctcct ccggggattt cttcaaactg ggctacagct
    10321 ctcattttaa tagagccgcg tcctgtcata taagcctgtt taatatcatg caagcctaca
    10381 atagtagctg ctgttgggaa atcaggacct tttatatgtt ccatcaagcc ctcaaccgta
    10441 atttcagggt tgtctattaa agcgattgtt ccatccacaa tttcattgag gttgtgagga
    10501 gggatatttg ttgccatacc tacagcaata cctgaaacac cgtttaacaa gagcataggc
    10561 agtcttacgg gaagaacagc cggttcttgc aatgagccgt caaagttggg tgtaaaatct
    10621 actgtctcgc agtcaatatc cgcaagcata gattgtgtaa ttttatgcat tcttgcttct
    10681 gtataacgca tagcagcagc agagtcaccg tcaacagaac caaagttgcc atgcccgtca
    10741 attgtttgat aacgggtaga gaaatcttgt gccatacgta ccaatgattc ataaacagct
    10801 gagtcaccgt gcgggtgata tttaccgagt acttcaccga cgattctggc acttttctta
    10861 aaaggtttat ctggtgtcat tcccagttcg ttcatcgcaa acaaaatacg tctgtgaacc
    10921 ggttttagac cgtctcttac atcaggcagc gcacgtccta caattactga catggcataa
    10981 tcgatataag aacgtttcat ctcatctcgt atattaattg gtactatttt accgtcttca
    11041 aataaattct gttggctcaa ttctccaccc ctaactaaat atatccatat caagatttta
    11101 gcataaacaa ggcgtggtgc aaattttgtt aattatcgga tgagcccagg aatctgttta
    11161 taaaaccgag aagagccgaa tttaaatcgt ttttgccgtt ttcgtctttc atgcttagca
    11221 tcaaatcagt ttcagcatca taattgtctg aatatatgct tgctgatttt tgtacaccgg
    11281 tatcagaagc gtttaacaat ggctgtgttt ctttgggtat gtacacacct cttgtcttgc
    11341 ttacataatt gtatttggca aacggattgt aatagtttgc gggatttatc atattgttgt
    11401 tgctcatatt ttttttataa gaattatttt tcacaaatca acatttcttt tctattaatt
    11461 tcatatgttt acaaaactta aaacaagaat tataatttaa ctcatggaag aactgaattt
    11521 aaaatgttat gctcacctcg gtgatgcggt ttatgaattg tttgtgagag aaaaagttat
    11581 tttgctgaca tcaaatcttg ctcgtatgca caaaattaac acatctcttg tgcgtgcatc
    11641 gtttcagtgt gagcttttaa atgtaatagg accttatttg actgaaaaag aagcagacct
    11701 gataagaaga ggcagaaatc ttccatcatc ttcctccaga aagacaaacc aggctttgca
    11761 tagaatagca acagggtttg aagtgcttat cggatacctg catttacatg acagagaacg
    11821 ccttttaaaa atctttaaat taatttcaga ttatattgac tcaaaagatc acattgtaac
    11881 tgattaagat tttcttttat agaattctat ctgtggtttt ttattaaatt tcaaatctgt
    11941 tttaaaagaa atgtccgtaa cttttttatt aagaagccat gacggataat tatcaaaagg
    12001 tatcaaaact ttattgtttt tactttcaaa aaacagtgta gagttactgt catttacctg
    12061 cataatgtat ttagcaggtt tgtttgtata aaaatttaaa tagattaact ccaaatcttt
    12121 tccatttatt ggttgaacaa aatgaatatt aaaaatagtg gaatcatcta atgccatcat
    12181 ctgaaataca aatggaatct caatccctat taaaggcaat gtctttactg aattacccca
    12241 ggtatcaggc aggtatttca attgtgacga agcaaggtat ctatcgagca acgccttttc
    12301 ttcatcagaa aactcgtgtt ttgctttata caaaagcgca ttatcattat ggtctttagc
    12361 aagtttgtaa ttgccgctta acaaaatagc tctataaata gcatttattc tcaaagatgg
    12421 ataaacatta tcgattcttt cgctggaatc attgatgaat atcacatctg gtgtgttgtt
    12481 tttccagttt tttacaacat tttgagcctg tgaagaggcg accatattgt aataagaaac
    12541 ataaggcatt agcattttgg tatccagaat ataatacaaa agccctttat ttgtcatatc
    12601 aaggaacgta tcttccggct ttttatattt attgataaaa gatgtgataa cctcaagagc
    12661 atatttctca tcatttctta tatccagctt gccagtattt ttaagctgag aggaaactgt
    12721 ctgaggccgt gtatttataa agaaaccgga tttcaaagta aaacaaaatt tatacataac
    12781 cccggcaatg agccccagaa aagaaagcaa aatcaggtaa tttataaaca ctgatgatat
    12841 ttttttgtaa tttacaaaca aaagccctgg aacaactata aaaataaata catatgaaac
    12901 ataagaaagt cttacaaaag aatctccatc aattcgtcca agtgtataag ttaaagaaca
    12961 aagcacaaaa attaatgaaa aaattatgat aaacattgtt tttttatcta gagattctct
    13021 attcataaat tgcttaattc ccaatattgc aagcacaggg aaagcaanna aatagcttaa
    13081 taaaaaattc aatgtaattg gaattaatct gcggcataat cgtaccaaaa gaaaaaaggt
    13141 tcgccttggc atagatgaaa gcctgtgcca caaaatacgg caatgtcgga taacaaaacg
    13201 caaggcagat taacagcaat aaagccatta atacaatatt tttacacgcg tttttttgcc
    13261 tcaagatttc ataaaatgca tacactgctg caggtaaagc agaaatcacc caggccattc
    13321 ctattgttgt ccaaaaggca ccaaaacaaa aggataagac aatataaagg cctaaaaata
    13381 acaacggctt tttaaataaa aaatctttta ccaaaaaaag aaaagctaat acatagcagc
    13441 caagcaaaat aaataaatta tcatgaatac ataagcctgc aagcggtatt aaaaataata
    13501 acccgtctgt aaacacagaa atacagagta aaaaatagat acaaatgagc aaattataaa
    13561 aaatagcatt tgcgcaataa taattataaa gattatctgc acctagaata tttgcaccta
    13621 tccaaccggc agcaatgtcc ctgccgccat gaacaagcat tatatcttta taatattcca
    13681 tattaaattt tttatgcata aaaaaagtat ttaaatgctc tgcctgatgg tgagggtcaa
    13741 caaacacctg attgttgcaa aacaactcac caaacgcgat tatcaccaat atgaagataa
    13801 aggcaatgaa caaattacgc gaaacatgat ttttgatggt tgaaaaatca aaaatatatt
    13861 tttttaacat tttgtataaa ggtataaata ttaaatagat taataaatac aaaaagaaaa
    13921 atgcaacgtc taattgtttg ttgtagtttt caaaaacagc tatacctgta taaaaatctt
    13981 tcagctgtcc gactgtaaaa aaaacggaca caaaattaaa aatcagtatc gcaatagcga
    14041 tactgnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnaaatttca
    14101 ttatttaatt ataagaataa agattatttt gttcaaggct ttgttagtta agcttaggct
    14161 tagttaccgt atttgaaagt tttttcgatg tttgaagttg tgttcttttc ccatccatca
    14221 acttgagaag aatacatttt ttgttttgtt tctatttgtt gtttt
//
LOCUS       DABS01000172            6106 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_7949, whole genome shotgun sequence.
ACCESSION   DABS01000172 DABS01000000
VERSION     DABS01000172.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6106)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6106)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6106
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            1..833
                     /locus_tag="CPT85_07875"
                     /pseudo
     CDS             1..833
                     /locus_tag="CPT85_07875"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     start; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    197..213
                     /estimated_length=17
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    746..769
                     /estimated_length=24
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            779..1132
                     /locus_tag="CPT85_07880"
     CDS             779..1132
                     /locus_tag="CPT85_07880"
                     /inference="COORDINATES: protein motif:HMM:PF02096.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21413.1"
                     /translation="MLLVVIFGASMFLTQKIMMAANKMQQADPAQEAMQKTLGTMMPV
                     MLTATFLFIPIPAGVLLYLITSNVIQVAQTLIINKQIDMEQESKKNKKTVIDEPLPET
                     KKVEAKEIKNTESEK"
     gene            1132..1704
                     /locus_tag="CPT85_07885"
     CDS             1132..1704
                     /locus_tag="CPT85_07885"
                     /inference="COORDINATES: protein motif:HMM:PF00484.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21414.1"
                     /translation="MIERAQKALDILLEGNERFTKGESTVSNRCVETLKAHKDGQSPI
                     ACIVTCSDSRVIPEMIFDKGFGELFVVRCAGAVIGENILESVEYAVDHLKVPLVMVLS
                     HDDCGVMKAAKAMYPKEPDHLQLLIRSVYEIIDSETECYNELARDYTLTKKRKLLKRS
                     AILRQAHSEGKFEIVRGYLSFEDGKVSILN"
     gene            complement(1701..2507)
                     /locus_tag="CPT85_07890"
     CDS             complement(1701..2507)
                     /locus_tag="CPT85_07890"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21415.1"
                     /translation="MKITQISHRNIKIQSFKSGTANKQISNMPAKQPNNQNQGCMPNS
                     VYWALVGYALATSTPAINFVEKITGIDEETKQMNLLLQKQQENFERCLDLTDEFTKVK
                     GLSAAHHPLRQFAETDMAEFFDIDEKTKGMAFSTDDNIIGLEINPDKNTMFGKLIIRN
                     KKDTAQTAIYEYKADLTEKAAKEIKIELKKQGSEKQDTINLKRLNNGSLVVEQNGKSK
                     IINRENVKKYQSMTDNYFMLNEIERRKGHNDLLYMFLLGLTIAKVFKKND"
     gene            complement(2524..3564)
                     /locus_tag="CPT85_07895"
     CDS             complement(2524..3564)
                     /locus_tag="CPT85_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004836017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="DAB21419.1"
                     /translation="MSISEYDYELPKELIAQTPSQKRENCRMMVLDRNRQSIEHKHFY
                     DITDYFDENDVLVLNNTKVIPARLFGRKNTGAHIEVFLLKQIGDKTWEVLINPSKRVK
                     EESIIEISPDLYVKVLTRKNEGKWLVELHYDGNFYEILDKVGNIPLPPYIERTMTDEQ
                     LKNLDYDRYQTVYAQIEGSVAAPTAGLHFTQEILKKLEEKGVQICYVTLNVGLGTFRP
                     VKVDNILEHKMDSEQFEISASTAKIINDAKKQGKRITAVGTTTVRTLETCMQKYDEIL
                     EVIDDSTLFIYPGFKYRVVDRLITNFHLPKSTLIMLTSAFAGKDFVFKAYKEAIKEQY
                     KFYSYGDCMLIN"
     gene            complement(3611..4625)
                     /locus_tag="CPT85_07900"
                     /pseudo
     CDS             complement(3611..4625)
                     /locus_tag="CPT85_07900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013537108.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
     assembly_gap    4244..4245
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4682..5044)
                     /gene="rnpA"
                     /locus_tag="CPT85_07905"
     CDS             complement(4682..5044)
                     /gene="rnpA"
                     /locus_tag="CPT85_07905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015945544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="DAB21416.1"
                     /translation="MLPGQYRLKNKKAFDATYRNHKIVSDSVITIYCGKSKKDSSLPT
                     RFGFVVSKKYNKRAVKRNRIKRLMRECVRLAIKEKKLDKLNNYMSFIIMPKVSENSFK
                     LKLKDVENSFYKLIQKIK"
     gene            complement(5131..5283)
                     /locus_tag="CPT85_07910"
     CDS             complement(5131..5283)
                     /locus_tag="CPT85_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_924420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="DAB21417.1"
                     /translation="MRRTLEGTKRKRQNVSGFRARMATPGGRTVLNRRRAKGRHRLAI
                     QAKKRA"
     gene            5387..>6106
                     /gene="proC"
                     /locus_tag="CPT85_07915"
     CDS             5387..>6106
                     /gene="proC"
                     /locus_tag="CPT85_07915"
                     /inference="COORDINATES: protein motif:HMM:TIGR00112"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="DAB21418.1"
                     /translation="MDKTIAFIGAGKMATAIIKGLLGSGLFDKNHIIASEPNKDYAHK
                     IEQELGIKMVHNNREAAAQADIILLAVKPFVVKDVLTEIEDRIDDSKLIITIAAGIST
                     NRVEEILEKTARVVKVMPNTPALLGEGMSAVCKGLHASDDDFECVKEIFSKVGKVISA
                     KEDDIDAITGVSGSGPAFYYYIIDQIAKAGEKLGLDYKTALTLSAQTALGAARMVLET
                     GVEPQQLIANVTTPGGTTAEGN"
BASE COUNT         1733 a         1093 c         1100 g         2137 t
ORIGIN      
        1 gcaaaatata tttttgtttt acaatataca taagaatata caggggagag aataaattgg
       61 attttacaac attaactata gattttttaa agcaattaag taatatattt ggcagttacg
      121 gacttggtat tattgcgctt accgttatca tcaggctcgc aatgtggcct ttaaatgtgt
      181 cacagcagcg ttcaatnnnn nnnnnnnnnn nnnctatcca ggaccgttat aaaaataacc
      241 cgcaggttat gcagcaaaaa atgatggaat tctacaaaga gcataaattc aaccccatgg
      301 ctggttgttt acctttgtta attcaaatgc ctatttttat cttgctttat tcttctttga
      361 tgagtcctca gtttatttct atggccggac aatctaagtt tttatttatt aacaggctgg
      421 atgctacttt aaaaggcaat gcaggaattt ccaatgacgg aaagttttct gtaggtccaa
      481 gagatacttt ctctttgaat aagaatatta aagtctatat tggtgataaa gagcttgaaa
      541 atgcaaaact ttctaatccc agaaatgcag taaaagttca gggtgatatc acacccgggg
      601 aacctgttga tttaaaaatc agcctcgatg attttgatct gaaattcagc cagcttgctc
      661 aaattacgag tgcacaggca acagtaactg acaacaacac aagagaaata gaaaaagtta
      721 ctttcacaaa acagggtgat aacctnnnnn nnnnnnnnnn nnnnnnnnnt atgatgtatt
      781 gcttcttgtt gtcatctttg gtgcttctat gttccttaca caaaaaatta tgatggcagc
      841 aaacaaaatg cagcaggctg accctgctca agaagcaatg caaaaaacac ttggcacaat
      901 gatgcctgtt atgttgacag caacgttcct gtttattcct attccggcag gcgtgttgct
      961 atatttgata acaagcaacg tcattcaggt tgctcagact cttattatca acaaacaaat
     1021 tgatatggaa caggagtcta aaaagaacaa aaaaactgtt attgatgaac ctttacctga
     1081 gactaaaaag gtagaagcaa aggaaattaa aaatacggag tctgaaaaat aatgattgaa
     1141 agagcacaaa aagcacttga tattttgtta gaaggaaatg agcgttttac aaagggtgaa
     1201 tcaacagttt ccaacagatg tgttgaaacg ctaaaggctc ataaagacgg acagtcaccg
     1261 atagcttgta ttgttacctg ttctgattcg agggtaatac ctgaaatgat ttttgacaaa
     1321 ggttttggag agctttttgt tgttcgttgc gcaggcgctg tgattggtga aaacattttg
     1381 gaaagtgttg agtacgctgt tgatcacctt aaagtacctc ttgtaatggt attgagccat
     1441 gatgattgcg gtgttatgaa agcggctaaa gcaatgtacc caaaagaacc tgaccatttg
     1501 cagctgttga ttcgctctgt ttacgagatt attgattcag aaacagaatg ctataatgag
     1561 ctggcaagag attataccct tacaaagaaa agaaaactgc tgaaacgttc agctatttta
     1621 agacaggctc attctgaagg taaatttgaa atagtcaggg gctatttaag ttttgaagac
     1681 ggcaaggttt caattcttaa ttaatcattt ttcttgaata cttttgctat tgtcagaccc
     1741 agcaaaaaca tgtataaaag gtcgttatgg cctttgcgtc tttctatttc attcaacata
     1801 aaataattgt cagtcatcga ttggtatttt tttacatttt ctctattgat gatttttgat
     1861 ttgccgtttt gttcaacgac caaggagccg ttgtttagtc ttttaaggtt gattgtatct
     1921 tgtttttcag aaccttgttt ttttagttca atttttattt ctttggcagc tttttctgtc
     1981 aaatctgctt tgtattcata tattgctgtt tgtgcagtat cttttttatt tctgataatc
     2041 aacttgccaa acattgtgtt tttatcaggg tttatttcaa ggcctattat gttatcatct
     2101 gtagaaaaag ccattccttt tgtcttttca tctatatcga aaaattcagc catatcagtc
     2161 tctgcaaatt gtctcaatgg atggtgggca gctgatagtc cttttacttt tgtaaattca
     2221 tcagttaaat ccaaacatct ttcaaagttt tcctgttgtt tttgcaaaag caaattcatt
     2281 tgtttggttt cttcgtcaat gcctgttatt ttttctacaa aatttattgc aggtgtgctt
     2341 gttgcaagcg catagcctac tagtgcccaa tatactgaat ttggcatgca accctggttt
     2401 tgattatttg gctgttttgc aggcatgttg cttatttgtt tattagctgt tcctgatttg
     2461 aaagattgta ttttaatgtt tctgtgcgat atctgtgtaa ttttcattgc ttttcctaaa
     2521 ctattaattt atcagcatac aatctccgta gctgtaaaat ttatactgtt ctttaattgc
     2581 ttctttatat gctttaaata caaaatcttt gcctgcaaat gccgatgtaa gcataatgag
     2641 ggtggatttt ggcaaatgaa agtttgtaat cagcctgtct acaacacgat atttaaaacc
     2701 cggataaata aaaagcgttg agtcatcaat tacttcaagt atctcatcgt atttttgcat
     2761 acaggtttca agcgtgcgca ctgtagtagt tcctacggca gtgattcttt tgccctgttt
     2821 ttttgcatca ttgatgattt ttgcagttga tgctgaaatc tcaaattgtt ctgaatccat
     2881 tttgtgttca agaatgttat caactttaac cggacgaaat gtcccaaggc caacatttag
     2941 tgttacataa caaatttgta cacctttttc ttccagcttt tttagaatct cttgagtaaa
     3001 gtgcaatcct gctgtaggtg cagccacaga gccttcaatt tgtgcataaa ctgtctgata
     3061 tctgtcatag tctaaatttt taagctgttc atccgtcatt gttctttcaa tgtatggcgg
     3121 aagcggaata ttgccgactt tgtccagtat ttcataaaaa tttccgtcat agtgcagctc
     3181 aacaagccat ttaccttcat ttttacgggt aagcactttt acatataaat caggagaaat
     3241 ttcaataata gattcttcct taactctctt tgacgggtta ataagcactt cccaggtttt
     3301 gtctccgatt tgtttgagca aaaacacttc gatatgtgca ccggtgtttt ttctgccaaa
     3361 aagccttgcc ggaatgactt ttgtgttatt taaaacaagc acatcatttt cgtcaaagta
     3421 atctgttata tcataaaaat gtttgtgctc tatgctttgc ctattcctgt caagcaccat
     3481 catacgacaa ttttcgcgtt tttgtgacgg tgtttgtgct atcagttctt tcggcagttc
     3541 ataatcatat tctgatattg aaataatgtt tgatgaaatt ttttgtttcg tgtccattta
     3601 tttgtgcttt ctaaaataag cccatttcta ttactttttc agctattctg actgtgttta
     3661 aggctgctcc gattcttatg ttgtctgcaa cgcaccacaa atcaatcgca ttatcaaatg
     3721 caatgttttt gcggattctt cccacataaa cagggttttc acccgctgca tcaactggtg
     3781 tcgggtagat atagttttcg gtatcatcca taacttcaac accccatgca ttttctagca
     3841 attctcttgc tttttcgggg gtaatttctt tttcaaattc gatagttaca gcttcagagt
     3901 gtccgtggaa aacaggtact cttactgcag tacaagaaat aggcacatct tctgaaagat
     3961 gcagaatttt tcttgtctcg tttgtaactt tcatttcttc ttttgtatag ccgttttcgc
     4021 agaagacatc aatctgcgga attacgttat atgcaattgg ttttttgaat ttaacgtttt
     4081 caaactcttt gccttcgttt actgcaacag tattttcttt aagctcgtta atagcagcga
     4141 tacctgcacc tgatacagcc tgataagtgc ttacaatcat tcgttttatt tttgcatagt
     4201 cgtgcagcgg ttttaataca agcattagct gtgatgttga gcanngggtt gggaattatt
     4261 cctttgtggt ttttaaggtc attgtcatta acacctacga taacaagcgg acaatctttg
     4321 tccattctgt aggcacttga gttgtctatg aatacacagc ccctttttac agcttccggt
     4381 gccagtttta atgatgttga tccgccggct gaagcaagaa caatatttac accctcaaag
     4441 ctttcagctg ttgcttcaat gatagtatgt tcttcccctt taaattctat tttttttccg
     4501 gcactttttg cactggccaa aaatttgatt tcattataag gaacattatt ttcaacgaga
     4561 atttttaaaa tttctctgcc tactacacct gttgctccta aaactgcgat attgggtttt
     4621 ctcattctgt tttccacctg tccgactgta ttcttaatca ctctacaatt atagtataaa
     4681 attattttat tttttgtatc agtttataaa aagaattctc tacatctttt agttttaatt
     4741 taaaactatt ttcgctcacc tttggcatga ttataaatga catatagtta ttgagtttat
     4801 ccagcttttt ttcttttatt gccagcctta cacattctct catcagcctt ttgattctgt
     4861 ttcttttaac tgctcttttg ttgtattttt tgctgacaac aaaaccgaat cttgtcggca
     4921 gagaggaatc ttttttactt tttccgcagt aaattgtaat tacagaatcc gaaactattt
     4981 tgtggtttcg gtaagttgcg tcaaaagcct ttttgttttt aagtctgtat tgtcctggaa
     5041 gcataatttt ttttcaataa acttaaaaca ggcctgcaat gctttggtgt gcggcagacc
     5101 tgttattaaa ccttttgtca gttaattaaa ctaagctctt tttttagctt gaatagccaa
     5161 tctgtgacgg cctttagctc ttcttctgtt taaaactgtt cttccgccgg gagtagccat
     5221 tctggctctg aatccgctga cgttttgtct ttttcttttt gttccttcta atgtacgtct
     5281 cattttattg ctccttgaat taaatttttt gcgttatatc atgataaaaa agacatagac
     5341 gattgtcaaa tgcggatagt acacgaatta ataaaggttt acacatatgg ataaaacaat
     5401 tgctttcatc ggtgcaggta aaatggctac tgcaataata aaagggcttc ttggctcggg
     5461 tttgtttgat aaaaatcata ttattgcgtc tgaaccaaat aaagattatg cccacaaaat
     5521 tgaacaagaa ctcggtataa aaatggtgca caacaaccgt gaagctgcag cacaggcgga
     5581 tattattctg ctggctgtaa aaccgtttgt tgtaaaagat gtgttaacag aaatcgaaga
     5641 cagaattgat gactcaaaac ttataataac aattgcagcg ggtatctcca caaacagggt
     5701 ggaagaaatc cttgaaaaaa cagcacgggt ggtcaaggtt atgccaaata ccccggcact
     5761 tctgggtgaa ggtatgagcg ctgtatgcaa aggtttgcac gcatccgatg atgattttga
     5821 atgtgtaaaa gaaatttttt caaaagtagg aaaagttatc agtgccaaag aagatgatat
     5881 tgacgctatt accggtgtaa gcggctcagg ccctgctttt tattactata ttattgacca
     5941 aatagcaaaa gccggtgaaa aactgggact cgattacaaa acagcactta ctctgtctgc
     6001 acaaacagcc cttggggcgg caagaatggt tcttgaaaca ggtgttgaac cgcaacaact
     6061 gattgcaaac gtaacaactc ccggaggaac aacagcagaa ggtaat
//
LOCUS       DABS01000173            4883 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_25049, whole genome shotgun sequence.
ACCESSION   DABS01000173 DABS01000000
VERSION     DABS01000173.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4883)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4883)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4883
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..512
                     /locus_tag="CPT85_07920"
     CDS             <1..512
                     /locus_tag="CPT85_07920"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21397.1"
                     /translation="DIINEKELNDGVVGEKATIQRFLQDLKGDKKILDRKILALSGYG
                     SAAAAFESADGKIIKLTDGNHFPMNRPAGVFDVPVYKKGHNGKTYYYIEEKLYRHNLP
                     SYLVDTVKDMIKQSGYKTVDLYEGDIHQIGIAKNGRVYLLDAECAQYKTVFHALFDKA
                     KRALLKTRV"
     gene            complement(509..1826)
                     /locus_tag="CPT85_07925"
                     /pseudo
     CDS             complement(509..1826)
                     /locus_tag="CPT85_07925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006915941.1"
                     /note="frameshifted; too many ambiguous residues; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
     assembly_gap    1191..1192
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1516..1533
                     /estimated_length=18
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1967..4792
                     /locus_tag="CPT85_07930"
     CDS             1967..4792
                     /locus_tag="CPT85_07930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014313740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="DAB21398.1"
                     /translation="MSEHKEFEFKDTLNLPKTTLAMRANAAVRELEIQDFWEMGRIYE
                     KNLAQRSIENKFVLHDGPPYLSSPKIHIGTALNKILKDILTKYKAQSGFYAPYVPGYD
                     GHGLPIENAVVKTIEGGREAISKYLLRLKCREFALRNLHGQEEDFRRLGVWGDWEHPY
                     VTISPEIEAEQVRIFGEMYQKGYIEKGLKPVYWCPHCETALAEAEVEYADHTSTAIYV
                     KFEFVEKDAEKIKELAGIQTDYPIYALIWTTTPWTIPSNLAISLNARYEYSLVQYADD
                     IYVIATDLVDAFVKDNQFEPEDVKILGSVKGRDIENFNTMHPLYDRKSPIILGDHVTL
                     DAGTGCVHTAPGHGLEDWEVCQRYDIEVLSPLDAKGIWTDEVPDLEGVTYEDGNKIVI
                     ERLDKCGALLSHKQITHSYPHCWRCKHPVIYRATPQWFVKVDRFRNAALREISNVQWI
                     PASGEQRISNMVESRSDWCISRQRVWGVPIPVFYCKDCGEPIVTPATIENLAKIFEKE
                     TSDIWVKEGAKYLLPTAFKCPHCGSRSFLKEKDIMDVWFDSGITHRAVVEKRYKELGH
                     LPVEMYLEGSDQHRGWFQSSLLTAVATSGRAPYMTVLTHGFVLDGEGKKMSKSLGNTI
                     APQDIIKVYGADVLRLWAASVDYRNDVRISENAIKQMVEIFKKMRNTSRFLLGNLYDF
                     DPTADYVYYKDLKAIDKFALHKLNTFIGNVTEAFENYEFYKYFQHLQNFAAADLSSFY
                     LDIVKDRLYTAGKKSLSRRACQTVLYEISQALTRMLAPVMPHQAEDIWQNMPEKHRDG
                     IESVLLTDWPTTNVKWANDKLEAEFTKILKLREIVTKAIEPLRADKQVGSSLEVAVYV
                     QGGDPELLKKYESELANIFITSQAELVDKAPEHVLNEYKEDDYTIYVTDAHGEKCERC
                     WKYRKLIQVGNHGEICQDCINAINGKE"
BASE COUNT         1480 a          979 c         1016 g         1388 t
ORIGIN      
        1 atgacataat aaatgaaaaa gagcttaacg atggtgtggt tggagaaaaa gcaacaatac
       61 agcggttttt gcaagattta aagggtgata aaaaaattct cgacagaaaa attctggccc
      121 tgagcgggta cggctctgct gctgcggctt ttgaatcagc tgacgggaaa ataataaaac
      181 tcactgacgg caaccatttt ccgatgaaca gaccggcagg agtttttgat gtccctgtgt
      241 ataaaaaagg gcataacgga aaaacttact attacattga ggaaaaactt tacaggcata
      301 atctgccatc gtatctggtt gatactgtta aagatatgat taagcaaagc gggtataaaa
      361 ctgttgattt gtacgaaggt gatattcacc aaataggtat tgcaaaaaac ggccgtgtat
      421 acctgcttga cgcagaatgt gcacagtaca agactgtatt tcacgctctt tttgacaagg
      481 ctaaacgtgc tcttttaaaa acacgtgttt aattgttctt ttctttgcgt tctctaaacg
      541 acattcttat aggtgttcca aagaaaccga aggcttctct cattttgttt tcgagatacc
      601 ttttgtagct gtcttgtaca aggtcttcgt cgtttacaaa aagaataaaa gtcggcggag
      661 ctgtgcgaac ctgtgttgcg taataaacac gcagcttttt gcctcttttt gtagaaggcg
      721 gattcattgc catagcttct aaaagcactt tgtttaaaat gcttgtggag acacgttttg
      781 tgcactgggc ataaacttct tttgcctgtt tgtatatgtt tactaacctt tgttttgttt
      841 ttgcgctgat aaaaatcttt ggtgcaaaat caagaaaagg tgcttcgtgc ataagtcttt
      901 gagtatattt tgcagtgggg tcggatttgt ctttgtcttc aacaaggtcc catttgttga
      961 ttgcaacaat caatcccttg cctgcttcta caacaatttg tgagattttt ttatcctgat
     1021 ccgtaagccc gtctgctgca tcaataacca gcacagcaat gtcacagtct cgaatagctc
     1081 tgattgctct gtctacagca aatttttcca caccccagtc aacttttgct ttttttctta
     1141 taccggccgt gtcgacaagg atgaattctt cgccttcgta ttttacttta nnttagagtt
     1201 tatgctgtcg cgggttgtac cggaaatatc gctgacaatc actctttctt cgccaagaag
     1261 cgcatttaca atggaggatt tgccggcgtt tggctttccg acaatagcaa gctttatcag
     1321 cccgttttct tccggatttt cgtcagaatc aaattcatcg gtaattgcat cgagcaggtc
     1381 accgatcccg ccggagccgt gcaatgctga aatcggatga ggctctccca gagcaagtgc
     1441 gtaaaaatca gcaatgttgt tgaagtgctc gggtgcgtct attttattta ccgcaaggta
     1501 tacagttttt ttactnnnnn nnnnnnnnnn nnnattccgt cttttccgtc tacgagaaag
     1561 attatttttt cagcttcttc gcacgcaact tttgcctgtg taaaaatatt gagcattatt
     1621 tcatcttcgt caccggggat aataccgcct gtgtcgatga gggtaaaatg tttgttctgc
     1681 cattcaacgt caaaatatat tctgtctctt gtaacacccg gctggtcatc aacaatagat
     1741 tgacgtgcgc ctacaattct gtttacaaaa gtggattttc cgacatttgg tcttccgact
     1801 acggctacaa tgggttttgt gctcataatt tacttcctgt ttaatagctg taactatttt
     1861 aatacaaaca aaacctgtaa tgctatattt tgtccaatca aaactttgct tcttaatctt
     1921 tttaatataa aattattatt atgtaacaaa cgaattgagg atagaaatgt cagagcacaa
     1981 agaatttgaa tttaaagaca cgctgaactt acctaaaact acccttgcaa tgcgcgcaaa
     2041 cgcagctgta agagaattgg aaattcaaga tttctgggaa atgggcagaa tttacgaaaa
     2101 aaatctggct caaagaagta ttgaaaacaa atttgtactt cacgacgggc ctccgtattt
     2161 gagctcaccc aaaatccaca ttggtacagc tttaaacaaa attttaaaag atattctgac
     2221 aaaatataaa gcgcagtcag gcttttatgc accatacgtg cccggttacg acggccacgg
     2281 gctgcctatt gaaaatgctg ttgtaaaaac tatcgaaggc ggcagagaag ctatttcaaa
     2341 atacctttta agactcaaat gcagagagtt tgcacttcgc aaccttcacg gacaggaaga
     2401 agatttcaga cgtcttggcg tgtggggcga ctgggagcac ccttatgtta ctatttctcc
     2461 ggaaattgaa gcagaacagg tgcgaatttt tggtgaaatg taccagaaag gctatattga
     2521 aaaaggcctg aaacctgttt actggtgtcc tcattgcgaa actgctctgg ctgaagcaga
     2581 ggttgaatac gctgaccata cctctactgc gatttatgta aaattcgaat ttgttgaaaa
     2641 agacgcggaa aaaattaaag agctggcagg aatacaaaca gattatccga tttatgctct
     2701 tatctggaca accacaccgt ggacaattcc gtctaacctt gcaatcagct tgaatgctag
     2761 atatgaatat tcgcttgttc aatatgccga tgacatctat gttatagcaa ctgaccttgt
     2821 tgatgcgttt gttaaagaca accagtttga accagaagac gtaaaaattc tcggcagcgt
     2881 aaaaggccgt gatattgaaa actttaatac aatgcatccg ctctacgaca gaaagagccc
     2941 gattatcctc ggcgaccacg ttacattaga cgcaggtact ggctgtgttc acacagcacc
     3001 cggccatggt cttgaggact gggaagtctg ccagagatat gatatcgaag tattgtcacc
     3061 gcttgatgca aaaggtatct ggacagatga agtgccggac cttgagggcg taacatacga
     3121 agacggcaac aaaattgtta ttgaaagact tgataaatgc ggcgctttgc tttctcataa
     3181 gcagattaca cacagctacc cgcactgctg gagatgcaaa caccctgtta tctacagagc
     3241 aactcctcaa tggtttgtta aagttgacag attcagaaac gctgctttaa gagaaatcag
     3301 caacgtgcaa tggattcccg cttccggcga gcaaagaatc tccaacatgg ttgaatccag
     3361 aagcgactgg tgtatttcaa gacagagagt atggggcgtt cctatccctg tattctactg
     3421 caaagactgc ggcgaaccga ttgttactcc tgcaactatc gaaaaccttg caaaaatctt
     3481 tgaaaaagaa acatctgata tctgggttaa agaaggcgca aaataccttc tgccaacagc
     3541 ttttaaatgc cctcactgcg gcagcagaag cttcttaaaa gaaaaagaca tcatggatgt
     3601 atggtttgac tccggtatca cacaccgtgc tgttgtggaa aaacgctata aagagctcgg
     3661 tcatttgcct gttgaaatgt atcttgaagg ctctgaccag cacagaggct ggttccagtc
     3721 ttcgctttta acagcggttg caacatcagg ccgcgcgcct tacatgactg ttttaacaca
     3781 cggttttgtg cttgatggcg aaggcaaaaa gatgagtaag tctttaggca acacaattgc
     3841 accgcaagat attataaaag tctatggcgc tgacgtgttg agactatggg cagcttccgt
     3901 tgattacaga aacgacgtaa gaatcagcga aaacgcaatt aagcagatgg tagaaatctt
     3961 taagaagatg agaaatactt caagattcct acttggcaac ctgtatgatt ttgacccgac
     4021 agcggattat gtttattaca aagacttaaa agcaatagat aaatttgctc tacacaaatt
     4081 gaatacattc attggtaatg taacagaagc atttgaaaat tatgaatttt acaaatactt
     4141 ccagcatttg caaaactttg cggctgctga tttgagctcg ttctatctgg atatcgtaaa
     4201 agacagattg tacaccgcag gcaaaaaatc actttcaaga cgtgcttgcc aaactgtttt
     4261 atacgaaatt tcacaggctt taacgagaat gctggctcct gtaatgcctc accaggcaga
     4321 ggatatttgg caaaatatgc cagaaaaaca ccgcgacggc attgaaagcg ttttgcttac
     4381 agattggccg acaacaaacg tcaaatgggc taatgacaaa ctcgaagcag agtttacaaa
     4441 aatccttaaa ctcagagaaa ttgtcacaaa agcaatcgag cctttaagag ccgacaaaca
     4501 ggtaggaagc tctttagagg ttgcggttta tgttcaaggc ggcgaccctg aattgctcaa
     4561 aaaatatgag tcagaactgg ctaatatttt cattacatca caggcagagc ttgtggacaa
     4621 ggcgcctgaa catgtgttga acgaatacaa agaagatgat tatacaatct atgtaacaga
     4681 tgcacacggc gaaaaatgcg aacgctgctg gaagtaccgc aaactcatac aagtcggcaa
     4741 ccacggcgaa atttgccagg attgtataaa cgcaataaac ggtaaagaat aattttgaaa
     4801 aaggatggat taaattccat ccttttttat ttacattcca aaaagctctg tgcttatttt
     4861 gtcaatagta gacttttctt tca
//
LOCUS       DABS01000174            5949 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_10560, whole genome shotgun sequence.
ACCESSION   DABS01000174 DABS01000000
VERSION     DABS01000174.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5949)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5949)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5949
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(220..789)
                     /locus_tag="CPT85_07935"
     CDS             complement(220..789)
                     /locus_tag="CPT85_07935"
                     /inference="COORDINATES: protein motif:HMM:PF01966.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21388.1"
                     /translation="MEALDAKDSYTSGRSKRITYYSIIVAKQLGLSTIDTGKVELAGM
                     LHDIGMIGVSDEILYKIDALSQEEYDEIKKHITYSVKILEDIKQLKDVVEIIKYHHEK
                     YDGTGYPYGVKGEDIPLGSRIIAVADAFDSIISNRIYRNKIELQDALNEIKKGALTQF
                     DPVVVKAFEDSFDAISAAVSESELSSYKD"
     gene            complement(823..1233)
                     /locus_tag="CPT85_07940"
     CDS             complement(823..1233)
                     /locus_tag="CPT85_07940"
                     /inference="COORDINATES: protein motif:HMM:PF00072.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21389.1"
                     /translation="MMDKKYNILLVDDEEDNLALLFRTLRGAYNLEKTTSPLHALEIL
                     KEKPFELVISDHKMPEMDGVEFLKHVQVHYPSTMRILLTAYSDANILIDAINYAKIYR
                     YVKKPFNPEELQLIVSSALEYYQLKYDNDKLIND"
     gene            complement(1248..2846)
                     /locus_tag="CPT85_07945"
     CDS             complement(1248..2846)
                     /locus_tag="CPT85_07945"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00512.23,HMM:PF02518.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="DAB21390.1"
                     /translation="MSFLGKNFRTKLSTQFAAFTTMLIAITVFCIAWYSIATVNNLAT
                     QITAQSKDLNDSISITLFQRLGELISAEDYKELDSAAQKMVDSNIVATVVVKDKATKK
                     VILHTQPSEKLREVFKENKISDKALRKKGKTLDDAIYKQSVTKDGKLIELGFYNEPIT
                     KLYLDMLRDNMLAMVFIFIFLGFFLSNLISGILIKPINILIKSLGDFAKGNFSHRLEE
                     TNYLEINRLIRSYNEMAESLEKLYQSLEQQVKDRTKELEAAYSELKSTQAMMVHSEKM
                     KSLGELVAGITHEINNPVNFIYGNLIHLKNYTADMMSVINQYSEFDADLTEEHKQKIK
                     ELKEEIDLDFLKDDLPELIRSCQEGTERTKNIVLDLKNFSRLEEAVINNVDLPREIDT
                     TLNILHNKLKNRITVHKEYQENMPHVEGFGGQLNQVFMNILDNAAFAIQDKGDIWIRL
                     KSDGNNAIIEFEDNGCGMDETTRKKVFDPFFTTKEVGQGTGLGMAISYKVIKNHKGTI
                     DLVTEPGKGSKFTITLPLRMKIHN"
     gene            complement(2860..3099)
                     /locus_tag="CPT85_07950"
     CDS             complement(2860..3099)
                     /locus_tag="CPT85_07950"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21391.1"
                     /translation="MAANGIKYAYKLGGLAASLTVFLCSALIFLNNQGHMNINTLIYA
                     LGIIVPAGLVVGYLGFQIGKIFDSAKKKKKLSKFK"
     gene            complement(3117..3725)
                     /locus_tag="CPT85_07955"
     CDS             complement(3117..3725)
                     /locus_tag="CPT85_07955"
                     /inference="COORDINATES: protein motif:HMM:PF07238.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21392.1"
                     /translation="MKKLLKLEQKISMVPQDIKGALSSKIKKIMGSCIDLEVKEADIP
                     YYKKGDTVEMFTIVDDGMLYFKPVVKEIDELNKVIKVEFNREKYELLQRREFTRIDFQ
                     KEFTLKDDTKEYVCVGIDIGAGGMKFATEAALTTSQDYPIEFTLEGSIPIQCFFKPIR
                     VDREKGKSTKNIVSGRFIALKNIDKIAIVQFCFKKQMESTNK"
     gene            complement(3750..5834)
                     /gene="flhA"
                     /locus_tag="CPT85_07960"
                     /pseudo
     CDS             complement(3750..5834)
                     /gene="flhA"
                     /locus_tag="CPT85_07960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006694617.1"
                     /note="membrane protein involved in the flagellar export
                     apparatus; too many ambiguous residues; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EscV/YscV/HrcV family type III secretion system
                     export apparatus protein"
     assembly_gap    5161..5162
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    5429..5450
                     /estimated_length=22
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1646 a         1210 c         1046 g         2023 t
ORIGIN      
        1 cttagacaat ccagatggtt ttttaaaatt ttttgcagct gcacatcgct aagagcaaaa
       61 tgtctttgca aatcttgcaa atatctgctg acatattttt cagcagtttt tatattcgta
      121 tcttttttgt tcaaaaggtt ttcgtgcatt tttgctcctt caatttaata atataaagaa
      181 gcaagcttaa aaacattgtc aaaaagagca attatttgat taatctttgt acgatgacag
      241 ctctgattcc gacactgcag cggatattgc gtcaaaactg tcttcaaaag cttttactac
      301 cacagggtca aactgcgtga gcgcaccttt tttaatctca tttaatgcat cttgaagctc
      361 aatcttgttc ctgtaaattc tgttggaaat gatactgtca aatgcatcag ctaccgcaat
      421 aatcctggaa ccgagcggta tatcctctcc tttaacgccg taggggtatc ctgttccgtc
      481 gtatttttcg tgatggtatt tgataatttc aacaacatct ttgagctgtt ttatatcctc
      541 aagaattttt acgctgtatg tgatatgttt tttaatctca tcgtactctt cttgagaaag
      601 ggcatcaatt ttatacaaaa tttcgtcaga tacacctatc ataccaatat cgtgcagcat
      661 gcctgcaagc tctaccttgc ctgtatcaat ggttgaaagc cccagttgtt ttgcaacaat
      721 aatagaataa taagtaattc ttttgcttct gcccgatgtg taggagtctt tagcgtcgag
      781 tgcctccatt atcgctttga ttgtaccgga gaacagctct tttcaatcgt tgatgagttt
      841 gtcgttgtca tatttgagct gataatattc caaagcagaa gaaacaatga gttgaagttc
      901 ctcagggttg aacggctttt taacgtatct gtatattttg gcataattta tcgcatcaat
      961 aagaatattt gcatcagaat acgctgttaa aaggattctc attgtagaag gataatgcac
     1021 ctgtacatgt tttaaaaact ctaccccgtc catttcaggc atcttgtggt cagagataac
     1081 aagctcaaaa ggtttttcct taagaatctc aagcgcatgc aaaggagagg tggttttttc
     1141 gagattgtaa gctcctctta aagttctaaa taaaagcgcg aggttatctt cttcgtcatc
     1201 tacaagcaaa atattgtatt ttttatccat catatacttc cgttatctta attatgaatt
     1261 ttcattctca aaggtaatgt aattgtaaat ttgctgcctt tgccgggctc tgtaacaagg
     1321 tctattgtgc ctttgtggtt tttgataacc ttgtagctga ttgccatacc aaggccggtg
     1381 ccttgcccga cttcttttgt agtaaagaac gggtcaaaaa cttttttgcg tgtggtttca
     1441 tccataccgc aaccgttgtc ttcaaactct attatagcat tatttccgtc tgattttaac
     1501 cttatccaga tatcgccttt atcctgtata gcaaaagcag cgttgtccaa aatgttcata
     1561 aacacttgat ttagctgtcc gccaaagcct tctacgtgag gcatgttttc ttgatattct
     1621 ttgtggacgg taattctgtt tttcagtttg ttatgcagga tattgagcgt tgtatcaatt
     1681 tctctgggca aatcaacatt gttgataaca gcttcttcca aacgagagaa attttttaaa
     1741 tccaacacaa tattttttgt tctctcggtt ccttcctgac agcttctgat tagttcaggg
     1801 aggtcgtctt ttaaaaagtc taaatctatt tcttctttta gttctttgat tttttgtttg
     1861 tgctcttctg tgagatcagc atcaaactcg ctgtattggt tgataacaga catcatatca
     1921 gcagtatagt ttttgaggtg gatgaggttt ccgtagataa agtttacggg gttgttaatc
     1981 tcgtgggtaa tccctgccac aagctcgcct aatgatttca ttttttccga atgaaccatc
     2041 attgcctgtg tgctttttaa ttctgaataa gcagcttcca actcttttgt acggtctttt
     2101 acctgttgtt ccaaagactg gtagagtttt tccaaggact ctgccatctc attgtaagaa
     2161 cgtataagcc ggtttatttc aagataattt gtctcttcaa gacgatggga aaagttccct
     2221 tttgcaaaat cgcccaaact ctttatgagt atgttaattg gtttaatcaa tattccggaa
     2281 ataagattgg agaggaaaaa cccgagaaag ataaatataa ataccattgc aagcatgttg
     2341 tctctcaaca tgtcaaggta aagcttagta atgggttcgt tataaaagcc cagctctatt
     2401 aattttccgt cttttgtcac agattgttta taaatagcgt catccagagt tttgcctttt
     2461 tttctcaaag ctttgtctga tattttgttt tctttaaaaa cttctcttag cttttcactt
     2521 ggttgtgtat ggaggataac tttttttgtg gctttatctt taacaacaac cgttgctact
     2581 atgttgctgt ctaccatttt ttgagctgca gaatcaagct ccttgtagtc ttctgcagag
     2641 ataagctctc ccaaacgctg gaaaagtgta atagaaatag aatcattcaa gtcttttgac
     2701 tgcgcggtta tttgagtagc aaggttgtta acagtagcta tagaatacca cgctatacaa
     2761 aataccgtta ttgcaataag cattgttgta aatgccgcaa attgtgtact caattttgtc
     2821 ctgaaatttt tacccaaaaa actcatattt ctcacttcgt tatttaaatt tgcttaactt
     2881 ctttttcttt ttagcggaat caaatatttt gcctatttga aacccgagat aacccacaac
     2941 aagcccggcc ggaacaataa tgccaagagc ataaatcaag gtgttgatat tcatatgccc
     3001 ctgattgtta aggaaaataa gcgcactgca taaaaatacc gtaaggctcg ctgccaagcc
     3061 tcccaattta tatgcatact taattccgtt tgctgccatt gttaatcagg ttcttcttat
     3121 ttgtttgtac tttccatttg ttttttaaaa cagaattgga caattgctat tttatcaata
     3181 ttttttaaag caataaatcg tccggataca atattttttg tgcttttgcc tttttctctg
     3241 tccactctga tgggcttaaa aaaacattgt atagggatag agccttccag cgtaaactct
     3301 atgggatagt cttgtgacgt tgtcaaagca gcttctgttg caaatttcat gccgcctgct
     3361 ccaatatcaa tacccacgca cacgtattct tttgtatcgt ctttgagtgt aaattctttt
     3421 tgaaaatcaa ttcttgtaaa ttcacgcctt tgtaaaagct catatttttc tctgttaaat
     3481 tcaactttta taactttgtt cagttcatca atctctttta caacaggttt aaaatacagc
     3541 ataccgtcat ccacgatagt gaacatttca acagtgtcgc cttttttgta ataaggtata
     3601 tcagcttctt ttacttctaa atcaatacag ctgcccatga tttttttgat ttttgaagac
     3661 agtgcaccct tgatatcctg cggcaccata gatatttttt gctcaagttt taataatttt
     3721 ttcataatct tttatttttt ccttattttt taaacatttg cagcagcaac cctgattacg
     3781 cctattgatt tagctttcac attgttactg atttcattat acgacataac cgcaatttgt
     3841 gggtatgttc tttctattaa tcttctaaaa ggaagcctta tgggtgaaga gcacaataat
     3901 acaggctggt tgccggatga tgaaatagca cgctcaagct cgtaattgag gttgtccaac
     3961 agctttcttg tgaattcagg gtcaagagta aggctggagc catcagggct aacaccttga
     4021 gcaatggtat tttcaacttc cggcgcaagc gtaacagcca gaagctcgcc tgtatctgcc
     4081 agattctgtt tacagatact tcttgataat gcctgtctta cctgttctgt cagataatcg
     4141 gcatttttgc ttacgcgtga ttgcaagctc aatacctcca gaattgtctt gaggtctctt
     4201 acggatactc tttcctttaa caggttgtac acaatctgct gaacctctgc cacggtaagg
     4261 tctttcatca agtcgcttac gtattcttcc gaaacttctt ttttcaaatt gtcgataagc
     4321 tgctgtatat ctgcacgcga cacaatctct gcagagttct ttttaataac ttccgtcagg
     4381 tgggtagaaa taacggcaga cgggctcaca acagtgtagc cgtaagtttc tgcaatttct
     4441 ttatcttttt cttcaaccca gattgccggc aacccgaatg cgggttcaat tgcactgata
     4501 ccgttaattc caaggtcgtt gtcagaaccg cctgcattca tggcaaggct tctgtcagga
     4561 tatacctctc cggattctat aggcacacct tttaatttga tttgataagt gtttggcggc
     4621 aattgcaaat tgtctctcac acgtatggat ggaagcacaa tacctaaatc taatgcagtt
     4681 tgtcgtctta tctgtgcaat tctttcgagc aaatcgccgc cctgctcaac atcaagcaat
     4741 ggcacaagac gatatcctat ttccatctcg atagtttcta cgtttaaaag ctccatgaca
     4801 ctttctcttg tagctttttt ctttttcttg gcaactttgc cgaggccggc ttcttctttt
     4861 ttggcttctt ccgctgcttt tgcttcttcg actttttgca ctttgtccgc tttgtctttt
     4921 ttaaatgcca tccacccgag tgaagcagct acaagcaaaa acggaatagt aggcataccg
     4981 ggcaccatac ccaataagaa caaaagtaca gaaacaatac caagcaccat ggggtttgag
     5041 aacatttctt ttttgatatc atcgctcaaa gactcttcct gtccgcttgc acgggacaca
     5101 atcaaacctg tggagaaaga aatcaaaagt gcaggcaatt gagaaacaag accatctccg
     5161 nntgtgaaag tgctcaaagc tgtcatgatg tccatcttga gctgccacaa accaataaca
     5221 ataccggcaa aaatgttcac cacagtgatg atgatacctg ctgtggcatc accttttaca
     5281 aactttgaag caccgtccat ggtaccgtaa aaatccgctt ctctctcgag tttacgtctt
     5341 cttgcttttg cctgttcctc gttaatcaga ccagagttaa ggtctgcgtc aatagacagc
     5401 tgtttaccgg gcatagagtc caacgtgann nnnnnnnnnn nnnnnnnnnn taccataaag
     5461 ttgataacaa caagcagtat aaagataatg aacccgacaa tgtagttgcc gcctacaaca
     5521 aattgcccga atgaatggat aacctcgccc gcagagccgt ttagcaaaat aagccttgtt
     5581 gagctgatgt ttaaacccag acgaaaaatc gttgcaacaa gaagtataat cgggaaagaa
     5641 gaatactcca gaggctcttt tacaaacaaa catacaagca agattattac ggaaagagat
     5701 atattaagcg taagcaaaat atccaaagcc atgggaggga gcggaataat catcatgaca
     5761 acgataatga caatacctat tgccatcaat atatcgttat tcttaagtaa gcttgctaaa
     5821 ccgcctaagt tcattgtctg tttttgtata ctctttccca attaaataat agcctatata
     5881 tgtttattta tcgaattctt taccaaactt caaatatcgg ttataatttc taaatgatta
     5941 taaaaactt
//
LOCUS       DABS01000175            4561 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_4665, whole genome shotgun sequence.
ACCESSION   DABS01000175 DABS01000000
VERSION     DABS01000175.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4561)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4561)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4561
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(1..825)
                     /locus_tag="CPT85_07965"
                     /pseudo
     CDS             complement(1..825)
                     /locus_tag="CPT85_07965"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     stop; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    426..436
                     /estimated_length=11
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(828..1505)
                     /locus_tag="CPT85_07970"
     CDS             complement(828..1505)
                     /locus_tag="CPT85_07970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006618794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="DAB21378.1"
                     /translation="MTNKDIKVLLVEDHMMIRMGTALVIEKTEGITLVGEAEDGQQGV
                     EMAKELLPDVILMDIGLPVIDGIEATRRIKELNLDSKILIFTSRDNDDDVFAALAAGA
                     DGYIMKGATAQQLTAALTAVNEGTAWLDPAIARLVLSNVQKQKLEDTTTDSINYKAGK
                     NTFGLTEREMEVLALIVDGLSNPEIAEKLFITRATAKAHVHSILQKLYVDDRTQAAVT
                     AMREGLV"
     gene            complement(1514..2077)
                     /locus_tag="CPT85_07975"
     CDS             complement(1514..2077)
                     /locus_tag="CPT85_07975"
                     /inference="COORDINATES: protein motif:HMM:PF02518.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21379.1"
                     /translation="MKKSNEDMLGLVNALLEVYKYESGKLNLCKTTFSLKDFIEEGIA
                     QLGALADKKGIKISVSYEDTKDADITADRNELRRVLLNLCGNALNHTKSGGEISISAL
                     NKEGDLILNVKDNGIGIPKEDLKKLFKRFSQGTSQKRSAGTGLGLYLSRQIVEAHNGK
                     IWVESEVSKGSVFSILIPDSLNIKEKV"
     gene            complement(2107..3051)
                     /locus_tag="CPT85_07980"
     CDS             complement(2107..3051)
                     /locus_tag="CPT85_07980"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00072.22,HMM:TIGR00229"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21380.1"
                     /translation="MYKSKRIIVVDDEQIMLSTLKMLLNLEGFTNVEFFESAKKALEN
                     IKENKPDLILSDFMMPEMNGIEFLSQAKTICPDTSMILLTGYADKENAIKAINEVGIY
                     KYIEKPWDNEELLISIRNGLERSGLIFELNNKIEELSQAKAQLEKYSHSLEEIVMQKT
                     ADLVESNTKLSAIINYCADGIVIVSHDAAIVQANPAFENLTGLDEHLLAGKKLQELIV
                     SDETKLKKITNDKKEVLLRDAAIRNFINDKNIPVEINFAPIPSDGKDDTEINYVGVVR
                     NVSLQKEMERLRDDFIATLTHDLRTPLLXFSLTELLAK"
     assembly_gap    2137..2139
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3169..3651
                     /locus_tag="CPT85_07985"
     CDS             3169..3651
                     /locus_tag="CPT85_07985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016292314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="DAB21381.1"
                     /translation="MRDELLSILEKNSRIDFKELAVLLGVTEEQVLQEITKLEKENII
                     AAYHTLINWEKTDIEKVSALIEVKVTPQRGQGFDHIAERIYNYPEVKSVYLISGGYDL
                     LVSLEEKSLKEIAAFVSDKLSTLDSVLSTATHFILKKYKDHGTIINKTTKDEREMFTP
                     "
     gene            3648..>4561
                     /locus_tag="CPT85_07990"
     CDS             3648..>4561
                     /locus_tag="CPT85_07990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015515998.1"
                     /note="catalyzes the transamination of the aromatic amino
                     acid forming a ketoacid; first step in aromatic amino acid
                     degradation in lactococci; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid aminotransferase"
                     /protein_id="DAB21382.1"
                     /translation="MRNFLSDKVTSLKPSGIRKFFDIVSEMKDAISLGVGEPDFDTPW
                     FIRDEGIYSLEKGRTFYTSNAGLKDLRKEIAAYIKRTQALNYDPDNEIIVTVGGSEAI
                     DIGLRAVINPGDEVIIPQPSYVSYEPCALLAGAKPVIINLKAENEFRLTPQELIEAIT
                     EKTKVLILPYPNNPTGAIMERGDLEKIAKIVVEKDILVMSDEIYSALTYKGRHVSIAS
                     LEGMKERTILINGFSKAYAMTGWRLGYACGPKDIIKQMTKIHQFAIMCAPTTSQYAAV
                     TALKKGDEAVEQMRLSYNQRRRFLMNAF"
BASE COUNT         1275 a          875 c          829 g         1568 t
ORIGIN      
        1 agctgcataa gcgaatacaa ttattctctc ggggttaagt gcgtcccacc ctacagggta
       61 gatatcccat ctgtaatctt ttaaataaag attttctttt tctctccagt aatactgtat
      121 cgcctctctt acttccgaaa ggtctttgac ttttcctgtt tccaaatcgt atacaagtag
      181 atttgttctc cacagacctt cgggtgtgta tgatattttt tcttttattg ctattctttt
      241 tccgtcagct gaccagtcaa ccacagtaag cgttttttga atatctaaat caagagaatc
      301 catctgggtt ctgtgtatgg tttttttaac gtggtttaca tgtgcctgct ctatcctgtc
      361 tttgatattt ttattcaaat caagattcat taaataaagc tctgtaccgg ctgtttttgt
      421 ggaagnnnnn nnnnnnttgt caaactgcgg ggaaacaact cctattgaat taacttttct
      481 ctttttttta agcgcattca gattgatatc tgtttgaccc ggagggttgt tatattttac
      541 aagcaatgtg gatggatcag gtaaatcaac aagttttgag tcttgttcaa aatgagggga
      601 tggaatttcc tgattttgtg cagcagcttt gttaactgct ctataatagt cctgcattgt
      661 ttttggcatg ttgtttacag gcttggggtg tgcttttttg tagcttttcg tccagaaaaa
      721 ttttgaggca atatctcttt caaagtcaaa agcatagctg tattgtgtat tgaaaacaaa
      781 caggcataag aatattgccg tgcatcttaa caatacctta tacatcgtta aacaagccct
      841 tctctcattg cagtaacagc ggcttgagtc ctgtcatcaa catacagttt ttgtaaaatg
      901 ctgtgtacat gagcttttgc agtagctctt gttatgaata atttttcggc aatctccgga
      961 tttgacaatc cgtctacaat aagggcaagt acttccatct ctctttccgt gaggccgaaa
     1021 gtatttttac ctgctttgta gtttattgaa tctgttgtag tatcttctaa tttttgtttt
     1081 tgtacatttg ataaaacaag tcttgcaata gcggggtcaa gccaggcagt accttcatta
     1141 acagctgtta gcgcagctgt cagctgctgg gctgtggcgc ctttcataat ataaccgtca
     1201 gcacctgctg caagtgctgc aaaaacatca tcatcgttat ctcttgatgt aaatataaga
     1261 atttttgaat caaggttcaa ctctttaatt cgtcttgttg cttcaatacc gtctataaca
     1321 ggcagtccga tatccataag aattacatcc ggcaaaagtt cttttgccat ttcaacaccc
     1381 tgctgtccgt cttctgcttc gccgacaagt gttatgcctt cggttttttc aattacaaga
     1441 gctgttccca ttcttatcat catgtggtct tcgaccagca aaacttttat atctttgttt
     1501 gtcatattat ttcctaaact ttttccttaa tattcaatga gtcgggtatt aatatcgaaa
     1561 atacgctgcc ttttgacact tcgctttcta cccatatttt cccgttatgt gcttctacaa
     1621 tctgtcttga aagatataag ccaagccctg taccggcaga gcgtttttgg cttgttccct
     1681 gcgagaatct tttaaacagc tttttcaaat cttcttttgg aatgcctatt ccgttgtctt
     1741 ttacatttaa aatcaggtcg ccttctttgt ttaatgcgct gatggaaatt tctccgcctg
     1801 attttgtatg attgagggca tttccgcaca gattcaaaag tactcttctc aactcgttgc
     1861 ggtcagctgt gatatcagcg tcttttgtat cttcatatga aacggaaatt tttatgcctt
     1921 ttttatccgc taatgctcct agttgagcta tgccttcttc tataaagtct tttagcgaaa
     1981 aagttgtttt gcacaggttc agttttccgg attcgtattt gtaaacttcc aaaagtgcat
     2041 taacaagccc cagcatatct tcattgcttt ttttcattgt atcaagcagt gttttttgct
     2101 tgtcacctat ttcgccaaga gttccgtcaa ggaaaannna agcagagggg ttctaaggtc
     2161 atgtgtaagc gttgcaataa aatcatctct cagtctttcc atctcttttt gcaggcttac
     2221 gtttcttact actcctacat agtttatttc cgtatcatct ttgccgtcag aaggtatagg
     2281 tgcaaaattg atttctacag gaatattttt atcgttaata aagtttctta ttgcagcgtc
     2341 tcttaaaagc acttcttttt tatcgtttgt gatttttttc aattttgttt catctgaaac
     2401 aattagctcc tgaagttttt tgccggccaa aagatgctca tcaagccctg taagattttc
     2461 aaaagcggga tttgcttgaa caattgctgc gtcatgtgac acgatgacaa taccgtctgc
     2521 acagtagttt attattgcac ttagctttgt atttgattcc acaaggtcag cggttttttg
     2581 cattacaatt tcttccaacg aatgcgagta tttttcaagc tgtgcttttg cctgagagag
     2641 ctcttctatt ttgttattaa gctcaaaaat aagaccgctt ctctccagtc cgtttcttat
     2701 gctgattaat agctcttcgt tatcccaggg tttttctatg tatttgtata tacctacttc
     2761 atttatcgct tttattgcgt tttctttgtc tgcataacct gttaaaagaa tcatgcttgt
     2821 gtcggggcaa attgtttttg cctgtgaaag aaactcaata ccgttcatct cgggcatcat
     2881 aaaatccgaa agtatcaaat ccggtttatt ttcttttata ttttcgagtg ctttttttgc
     2941 agactcaaaa aactcgacat ttgtaaaccc ctcaaggttg aggagcattt ttaacgttga
     3001 gagcatgatt tgctcatcat cgacaacaat tattcgttta gacttataca tcacaatatc
     3061 ctttaatata aagaatatcg tatatttaca agcaggacaa atattttaca attgtaaagc
     3121 aatgtaatat aatcattgaa ttaaatgtat tatggagaaa tttaaattat gagagacgaa
     3181 ttgctttcca tacttgaaaa aaacagcaga attgatttta aagagctggc tgttttgctc
     3241 ggtgtgacag aagaacaggt acttcaagaa ataacaaaac ttgaaaaaga aaatattatc
     3301 gcagcatatc acacgctaat taactgggaa aaaacagata ttgaaaaagt ttccgctctc
     3361 attgaagtaa aagttacccc acaaagagga cagggctttg atcatattgc agagcgtatt
     3421 tataattatc cggaggttaa gtctgtctat ctgatttccg gcggatatga tttgcttgtt
     3481 tctttggagg aaaaatcact taaagaaata gctgcttttg tttctgataa actgtctact
     3541 cttgatagtg ttttgagcac agcaacgcat tttatcctta aaaaatataa agaccacggt
     3601 acgataataa ataaaacaac aaaagacgaa agagagatgt ttactccatg agaaatttcc
     3661 tttccgacaa agtaacaagc ctgaaaccat ccggcataag aaaatttttt gatatcgtaa
     3721 gcgaaatgaa agacgcaatt tcgctcggtg ttggcgaacc tgattttgat accccttggt
     3781 ttatacgtga tgagggtatt tattctcttg aaaaaggaag aactttttat acctcaaacg
     3841 caggcttaaa ggatttgaga aaagaaattg ccgcttatat taaaagaaca caggctctaa
     3901 attatgaccc tgataacgag attattgtca cagtaggcgg gtcagaagct atcgatatag
     3961 gcttgagagc tgtaataaat cccggcgatg aggtcattat cccccagcca tcttatgttt
     4021 cttatgagcc ttgtgcactt ttagcaggag caaaacctgt aatcatcaat cttaaagctg
     4081 aaaacgaatt caggcttaca cctcaggagc taatcgaggc aataaccgaa aagacaaagg
     4141 ttttaatcct tccttatccc aacaatccaa ccggtgcgat tatggaacgc ggggatttgg
     4201 aaaaaattgc aaagattgtt gttgaaaaag atattcttgt catgtctgat gagatttatt
     4261 ccgcccttac ttataagggc aggcatgttt ccattgcttc tcttgagggg atgaaagaac
     4321 gaactattct tataaacggc ttttcaaaag catatgcaat gaccggctgg cgtcttggtt
     4381 atgcttgcgg gccaaaggat ataatcaaac aaatgacaaa aatccatcag tttgcaataa
     4441 tgtgcgcccc tacaacaagc cagtatgctg ctgttactgc tcttaaaaaa ggtgatgaag
     4501 cggtagaaca aatgagactt tcatacaatc agcgccgcag atttctcatg aacgctttta
     4561 a
//
LOCUS       DABS01000176           17205 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12381, whole genome shotgun sequence.
ACCESSION   DABS01000176 DABS01000000
VERSION     DABS01000176.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 17205)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 17205)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17205
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..731)
                     /locus_tag="CPT85_07995"
     CDS             complement(<1..731)
                     /locus_tag="CPT85_07995"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21339.1"
                     /translation="MKILNNTFNYTNYKQNFSARLSEKEIVESVKTIIEKFDVPIVNK
                     DADYFTKMLRGSKINPAEKQTVDEWITIKLSKYLKFNDEKEKKLSIEEIKYLENKGKK
                     NSLFNKGKNALKNFLEPILEFDRSKHPVMKRYEEEKQNANLFKKFKDVFSSYLDLVPQ
                     QVKKTEEISLDDEIKMQLKEIYGVDLDLSKAIKTKLKEPVKTPNAEKNAPIKEPKAPK
                     EPVKAQVINYEKNGNPKALLGIDET"
     gene            complement(753..>2258)
                     /locus_tag="CPT85_08000"
     CDS             complement(753..>2258)
                     /locus_tag="CPT85_08000"
                     /inference="COORDINATES: protein motif:HMM:PF00004.27"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21340.1"
                     /translation="SGQTKYDEAMEPYWDGHYKYQEIEENLSNLRAIINDHYSTIQAK
                     EDTLATLKRERNSLIAELSSASLGDHIRSSMHQNGSINKRIAGYDDVKQKIENDFVAP
                     LMASAKDDSVKLPNAVVLYGATGVGKTEMLRGIEEQCKEVANVVHFPMDTTLKDFKDA
                     MIKLLAAAKDTYRNQKKRTIILFDEAEKYISMTSNQAKRYGADFEPDDFDVLKKFGDN
                     NGDNVQYMKSLLDWISEKPDCKNMEKSATTLFITTNYPHLIDQDLMKRKGKFLPVAVK
                     PASGSNLKAVIKHYFKKYSDMLEAIKSHSTDANFRESLNGQIGLTEKAKHVLAEKAEK
                     GTISNMYINSELTDWPNWERFQKFTNPSDSKGAYSNIEIKYMIKDAFERYTENPSKPM
                     YQYFFDVKSETKRDITPKRYEKFKNIHNIVSDKVEEEVMDETTKTFSELLKDYTNGNT
                     NDEMSKMVEDKMEKIKKEFSILEEIKKEGGTLSQGEQEQYKLYKSWLEIWE"
     assembly_gap    2259..2275
                     /estimated_length=17
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2627..2628
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2903..3634)
                     /locus_tag="CPT85_08005"
     CDS             complement(2903..3634)
                     /locus_tag="CPT85_08005"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21341.1"
                     /translation="MKIQSKEYNTSLSTNFKGGLTKSMMSEINRLDVVAAQNYLKKHN
                     IDANFENNKIVAWSVLKVTNIFKTINKKYNLNLQLPQKIFVLDLKKFENVDYNSAYGF
                     CNFLPARLSKNNEHITPPMSVIFNKDLPWDRIDEIIDYDFYINSNTATNFFLEPFFHE
                     LSHIVHEGNLLNKNSIKNTMKKLMFLTEDTTIEAYREKYGNTAQKRICSYAQKGPLDL
                     VACDLSKRFIKTIDKENLXCQGKSI"
     assembly_gap    2925..2926
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3930..4829
                     /locus_tag="CPT85_08010"
     CDS             3930..4829
                     /locus_tag="CPT85_08010"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21342.1"
                     /translation="MRQSEFRDEHNKFTLKRTLNAENETLTELFEDFKKLFDDSYICQ
                     KIKNSQSKEYLGLINKIADESEQNKIDYKKEVSYFAKDVQNSKFVNTIEVPKISSNVV
                     EANLAHNVINDVKKIFFTFKDSDTPLIKESNKAFTDITKNYLQYYSDSTKSIKAMHKG
                     SEKWLERIPGVGLSARVNRVAQQQECAKYVYETHNAYCNKYIHNGIRPIALAYKEKVV
                     QTENYINWASPHLSYKENEYVNTALSNMKKLAKPHLERYMQIISTISQKSEIIASFCK
                     AINNNGDISSISKAIRTIAFLGF"
     gene            4849..7437
                     /locus_tag="CPT85_08015"
     CDS             4849..7437
                     /locus_tag="CPT85_08015"
                     /inference="COORDINATES: protein motif:HMM:PF05193.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21343.1"
                     /translation="MLNTSINTPFINYKSAKLSTDSSKSAISYKILPDGHRLAIVNKN
                     GGCLIKTFVDTHKANYFHSHILEHLLADINNLKEGEFLESIGTSKYAETAQKSTNYLL
                     ESPFDDRKIIYDLIKTQFNILNNKQNIFKSLQKEKFVLKSEYAFLEDNRKLSELDKEK
                     KDIQDKTIKAIYQIDSVLNEDNGYSSDFIDKTSTRDLQYLYEKYYQPENMTTVVVSPA
                     KPEEIEKEFLKYCKKNNIEHRPNITVKPVAKLNNRIRADYFSKNFIDDNIAIYFKAPD
                     WKNTKDVLISQLIPLIINNNSNLFNIENFNANVINLRDDLIILHASSPRRQEEKTLAQ
                     INKQLTELTQKAVKQENLENAKATLLNTISLKKEIAPLLLGEIEKAIFNDTLNTTLQS
                     EDIVKDITTSDIQAFAKKYLDINKSYTVVIHNPNILPAAFCRFSSPFLKNISFKSNMN
                     YLDTGKFYEYKYPSNLRLTVNADKKINRASYLLKFDSKGNKLTDNPVEMNVLLTLIRL
                     NIEKNIDKKFKNHCHINFDNDCISIDISYTPALLKDMIQSLNSSIQNVSFDDKLVLKA
                     KEKAKLYSEIDSILSKQYRVKNLDDSFQKITSQNLKKLYNDILKNCEANAVLIIPENY
                     FTNNKNDILSLINKGFEKQSFPEKVEYHTDYFKQNSFEKTKVICYESDVNNCSVTQSF
                     RATGIGPKKDLTLTLLNTVLGDSLNSIMLKELRLKKCLYICNSHYGSKDNVAYIHMLS
                     EFKPGNDYNYSIKDALKDYKKFVSELSNGEIESKLFENAKVLVKANIAYLNNASEGKL
                     SLLKNYDAQTYKKLYSIIDEITIEDIKQAAKEVLDKPSLIEIKVPKDVLKKNMPFLMT
                     TGEVHI"
     gene            complement(7447..8232)
                     /locus_tag="CPT85_08020"
     CDS             complement(7447..8232)
                     /locus_tag="CPT85_08020"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21344.1"
                     /translation="MIRPIANINCNYNLVNKNNPSFSGNYKSGINFIVKSEKLPVNKL
                     IKQVKELVFNRAGKIFSQKSKAAKLPVANKPLTAAMALEKGKDFDSKFVEETLRNVQY
                     GPGSTTYTDTTILINRIPKEFLPNKPWDPPMTDSGHLTHSAKESIIKQVENSNMPSYE
                     KESLIRDIKRNYIDETGKNDIITFAGAKENVNVQDLNPKDFDISDAIDKHLDIGIDAV
                     EHYGQAIEHSIDHGVEQGLEHGIEQSLENGLDHGVDIFFDLLT"
     gene            complement(8313..10232)
                     /locus_tag="CPT85_08025"
     CDS             complement(8313..10232)
                     /locus_tag="CPT85_08025"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21345.1"
                     /translation="MSYGITYDSSIKWTDSLSFYQSQLLEAEKEGKDTADIQVFNNDL
                     LPMTGTEVEKEDKKLNRDFNISELVKKYKKNPADILKELNIGFSDEQKEKLAGIITDK
                     KKLKAFLEIAQNEKLSANDIYSAMESIKNYKPSSWLKRVGNSIKTFFTDYEEFEKLAK
                     SETVYYAGKLSENMGQIREKREDFTSEGTTQIATIMTKEPDIKDNVMHFVVKDADSKN
                     KYYSEKDVTRAATFISNNVKKADEYTQNAQEMEAITNEKGQIKYTANTTLDVAERVTL
                     KNEIKSATMAVAKKSDMTEEFLGNISKNLFDNPEMSEVVEYQATAKNIDNKDKFTAGN
                     INSTSNELVNASSKYCATYTQTVKELGQNPKLSGSDINSIASDISKHPEIKDRVMEKI
                     QNGNYTADEIVKYSSQCAKEARANNINDSAKTVSSVTVTNNVSSKESETTAKISATNP
                     IQNKTSQQATQRFYVNKQENDTTKVKEQENEISAKVVTINGKSYDRDKVFHKLTIQFG
                     TLAEQVLENLHDPAFLDVLKTYGSNKILLQAALEQPEVLEKLKSTCKLSKTDLAQTYE
                     QCTNSTNTDIMLLALSTTKNAHKAIEITKHSKTFNLGDQTIDILNSSKDSIKKREELD
                     NLYQTGKSQSKKNNR"
     gene            complement(10406..10822)
                     /locus_tag="CPT85_08030"
     CDS             complement(10406..10822)
                     /locus_tag="CPT85_08030"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21346.1"
                     /translation="MKVKXKEPQQVQEKPQQPNTNPTQSIVKPQEPKPQLNTQQPQNV
                     QTYQSGKPGNLVDKMQQQYQQKQNPIGAQSMQQSPVASSELKTPEYQAGITRTYIPNP
                     ILGYEAPVNPASSRSAQIDAVLRQADIVEAQAQRFM"
     gene            complement(10767..12236)
                     /locus_tag="CPT85_08035"
                     /pseudo
     CDS             complement(10767..12236)
                     /locus_tag="CPT85_08035"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    10808..10809
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    11439..11478
                     /estimated_length=40
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(12383..12886)
                     /locus_tag="CPT85_08040"
     CDS             complement(12383..12886)
                     /locus_tag="CPT85_08040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011361150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="DAB21347.1"
                     /translation="MQVILRKDVQNVGEAGDVVTVKDGYARNFLIPQNVAEIATAGAL
                     KNREQNLARIKAKQEKLHQEALELAQRIEALEKLELSARAGESGKLFGTITTKKLAEE
                     LNAKLGTSIDRKIISLDAAINKVGEFRMLIKLTSKVKTELPVIVTASEILQSEIEEAP
                     ETEEAAE"
     gene            12998..14812
                     /locus_tag="CPT85_08045"
     CDS             12998..14812
                     /locus_tag="CPT85_08045"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01136.17,HMM:PF12392.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21348.1"
                     /translation="MITTDKKIELLAPAKNKECAFAAINAGADAVYLGAESFGARKKA
                     GNSIEDIKEIVEYAHKFLVKIYVTVNTIFFDNELDDVEKLIWQLYEIGVDAVIFQDFS
                     FFEMNLPPIALHASTQCNNDSLDKIKFLKQLNVERVVLPREYSLKEIKNVTENVDIET
                     EVFVHGALCVSYSGQCYFSNYVGGRSANRGECAQPCRRKYSLVDDRGNVLLEKQYLLS
                     MKDNNLSAHLKELICAGVTSLKIEGRLKDKEYVTNVVSYYRQAIDSISKTLKASEGEI
                     ITSFVPNPDKTFNRGYTNFYFDGKRKNFINPLTPKFMGEKIGTVKSVKGKSVVIDSKH
                     NLNPGDRLAYFDRNNDLTGTTVKTVNKTAIEVLDASSIKQGTVLYRNYDSLFYKSLNS
                     AEFKRKIPVKIFADNKKIVIKSFDNNQITYEYKENFETANNIEKAKDTIAKQLAKLGH
                     TEFFAKETVIDEAFNLFIPVSKLNEIRRVAVNQLVLKSKKNYKFQRRDTKIEYKDYPF
                     NVLDYSFNISNTKAKDFYEKCGCNIKQLGKQWAPEHTKCPNITLMKTKHCLRDFAGIC
                     LKKNKDTRKLFLIDEYGKKYPLNFDCKKCIMKIEITDI"
     gene            14836..15048
                     /locus_tag="CPT85_08050"
     CDS             14836..15048
                     /locus_tag="CPT85_08050"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21349.1"
                     /translation="MRVKKTHIIDSVVRAAAKKRVQPANHQNKVELKGIPDTDIVEFM
                     IDSFNAQIQDQKKRDLENILKSFIQK"
     gene            complement(15098..16333)
                     /gene="nusA"
                     /locus_tag="CPT85_08055"
     CDS             complement(15098..16333)
                     /gene="nusA"
                     /locus_tag="CPT85_08055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012959350.1"
                     /note="modifies transcription through interactions with
                     RNA polymerase affecting elongation, readthrough,
                     termination, and antitermination; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="DAB21350.1"
                     /translation="MIKIGTALFEATEELEREKGISKEVIIESLKDALVAAYKKHIKV
                     KEAPNVEAILDEVTGEIGVFRTKLVVENVEDENLEISLEDAKEIDDEVELEDEVKIEV
                     TPENFGRIAAQSAKQVITQRIREAERKLVLDEFLEKKGTLTTGIIQRVENRNVFVNIG
                     KTDAILPFREQIPGEYYKPGNRIRVFVLNVKETNRLPQVIVSHAHAEIVRELFELEVP
                     EIEDGIVEIKSIAREAGFRTKLAVHSNDPEIDSVGACIGPRGSRIQTIVGELKNEKID
                     IVRWSEDPVEYIVNALSPARIISVDILADDENAHEALVVVPDDQLSLAIGREGQNVRL
                     AHKLTGWKIDIKNESQAAQAEAAYQAQYEEQPVEEEYVEETIETEEEPIVEEEYGIDA
                     EDMMEEVPEEEVEAQDDEE"
     gene            complement(16347..16835)
                     /locus_tag="CPT85_08060"
     CDS             complement(16347..16835)
                     /locus_tag="CPT85_08060"
                     /inference="COORDINATES: protein motif:HMM:PF02576.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="DAB21351.1"
                     /translation="MESKHFNKNEILDKLVPLIDNTAMRYNLIPLEIDFTKENGKWFL
                     RIFLYKEEGVTLDDCENVSRSLNPFLDELIPVKFYLEVSSPGLDRKLKSDKEYIIFQG
                     KLINLKLKTLVEGTDEKQFVCKILDFDPENGLKVLKTDDNKELVVPKDKIHRAQLHIE
                     DI"
     gene            17031..>17205
                     /locus_tag="CPT85_08065"
     CDS             17031..>17205
                     /locus_tag="CPT85_08065"
                     /inference="COORDINATES: protein motif:HMM:PF03746.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactam utilization protein LamB"
                     /protein_id="DAB21352.1"
                     /translation="MEENNKKWVDFNIDLAQNDQNADTINELIEEVSSVNIACGVHSG
                     NPLSMKQAVENCKF"
BASE COUNT         5272 a         2747 c         2655 g         6468 t
ORIGIN      
        1 tctgtctcat caatgcctaa taaagcttta gggttgccgt ttttttcata atttatgact
       61 tgtgctttga caggttcttt aggtgctttg ggctctttaa ttggagcatt tttttcagca
      121 ttcggtgttt ttactggctc ttttaatttt gttttaattg ctttagataa atccagatca
      181 acaccataaa tttcttttaa ttgcattttt atttcatcat ccaaacttat ttcttctgtt
      241 ttttttactt gttgtggtac taaatcaaga tacgaagaaa aaacatcttt aaattttttg
      301 aataaatttg cattttgctt ttcttcttca taccttttca ttaccggatg ttttgacctg
      361 tcaaattcta atattggttc caaaaagttt ttcagagcat tctttccttt gttaaaaagt
      421 gaattttttt tacctttatt ttccaaatat tttatttctt cgatgcttaa ttttttttct
      481 ttttcatcat taaatttcaa atatttggat aactttattg taatccattc atctacggtt
      541 tgcttttcag ctggatttat cttacttcct ctgagcattt ttgtaaaata atcagcatcc
      601 ttattaacaa taggcacatc aaatttttct atgatagttt taacactttc tacaatttcc
      661 ttttctgaaa gccttgctga aaaattttgc ttataatttg tatagttaaa tgtattattt
      721 aaaattttca tttctttttc cttttctcta aattattccc aaatctcaag ccaactttta
      781 tatagtttat actgttcttg ttcaccttga gaaagtgttc caccctcttt ttttatttct
      841 tcaagtatgg aaaattcttt ttttattttt tccattttat cttctaccat ttttgacatt
      901 tcatcattag tatttccgtt tgtatagtct tttaataact cactgaatgt tttagttgtt
      961 tcatccataa cttcttcttc aactttatca gaaactatat tgtgtatatt tttgaatttt
     1021 tcataacgtt ttggtgtaat atctcttttt gtttcacttt taacatcgaa gaaatattga
     1081 tacattggtt tggaaggatt ttctgtatat ctttcaaaag cgtcttttat catatatttg
     1141 atttctatat tactgtatgc accttttgaa tcagaaggat ttgtgaattt ttgaaatctt
     1201 tcccaattcg gccaatctgt caattcagag ttaatataca tgtttgaaat tgtacctttc
     1261 tctgcttttt ctgctaaaac atgtttggct ttttctgtca atccaatttg accgttaaga
     1321 ctttctctga aatttgcatc agtcgaatgt gacttgattg cttcaagcat atctgagtat
     1381 ttcttaaaat agtgtttgat aacggccttt aagtttgaac ctgaagccgg tttgacagca
     1441 acaggtaaaa atttgccttt tcttttcatc aaatcctgat caattaagtg gggatagttt
     1501 gttgtgataa ataaagttgt agcacttttt tccatatttt tacaatcggg tttttctgat
     1561 atccaatcaa gaagtgattt catatactga acattatccc cgttattatc tccgaatttc
     1621 tttaatacat caaaatcgtc cggttcaaaa tcagctccgt atctttttgc ttgatttgag
     1681 gtcattgaaa tatacttttc tgcttcgtca aataatataa ttgttcgttt tttttgattt
     1741 cgataagtat ctttagcggc agccaacaat ttaatcattg cgtctttgaa gtctttcaat
     1801 gttgtatcca tagggaaatg taccacattg gcaacttctt tgcactgttc ttctatgcct
     1861 ctcagcattt cagtttttcc gactcctgtt gctccatata atacaacagc atttggtaac
     1921 ttgacagaat cgtctttggc agaggccatt aatggagcga caaaatcgtt ttcaattttt
     1981 tgttttacat catcatagcc tgcaattctt ttattaatac tgccgttttg gtgcatagag
     2041 cttctaatat gatcgcctaa tgatgcactt gaaagttctg caataagtga gtttctttct
     2101 ctttttagcg tcgcaagagt atcttcttta gcttgtattg tactatagtg gtcattgata
     2161 attgctctta aatttgaaag gttttcttct atttcttgat atttataatg tccatcccaa
     2221 tacggttcca ttgcctcatc atattttgtt tggccgctnn nnnnnnnnnn nnnnnatcta
     2281 tccctctctg ccttttttgc tgcttcggct ttgttttcgt aatatgcttt ttggatagaa
     2341 tcgtgccatt cgttataaaa tctgattttt tcttctgcat cttttactct agcaggtttt
     2401 accattgtat ttaaataatc ttccaatgtt tctattcttt gtttatttgc atttattttt
     2461 tgtatcaagg tagatgtata ttcgcctaat tccagtttag gagtcagttt ttttgccgct
     2521 ttatgagaaa tgtgcatttt ggtaatctca gttgtcattt tttcatcaag tgtctttgtt
     2581 accggcttta aaagtttttt tagataaccg gccttgattt ggccaanngg aaacgaaaaa
     2641 ttatcggatg ataacatctg attattattc tgttgtataa ctgacttgtt cgctttttga
     2701 atttgtctgt tgtaactgct taaaattgaa atttgttgta ctttcataat ctctccttat
     2761 tatctatatt taagtaaata aatttttatt aattttgttt atttttccgt cataaaaata
     2821 tcttattaac tttttaaaag agtcattatc attcctttta aaaagttttt ttatatagaa
     2881 atagttttga tagggtgagt catcaaatgg atttcccctg acagnnaaga ttttctttgt
     2941 cgattgtttt tataaatctt ttgctcaaat cacaagccac taaatccaac ggtccttttt
     3001 gggcatatga gcatattctt ttttgtgctg tgttgccgta tttttctcta taagcctcta
     3061 tcgttgtatc ttctgttaaa aacatgagtt ttttcatagt attttttata ctgtttttat
     3121 ttaacaaatt tccttcatgt acaatatgtg ataattcgtg aaaaaacggt tccaaaaaga
     3181 aattagttgc tgtgttggaa tttatataaa aatcataatc aattatttca tctattctgt
     3241 cccagggtaa atctttgtta aaaatcacac tcattggcgg tgttatatgt tcattatttt
     3301 tgcttaacct tgcaggaaga aagttgcaaa aaccgtatgc actgttataa tcgacatttt
     3361 caaatttttt taaatcgagt acaaatattt tttgtggtaa ctgaagattt agattgtatt
     3421 ttttatttat ggttttgaaa atattagtaa cttttaaaac tgaccatgca acaattttat
     3481 tattttcaaa attggcatct atattatgtt ttttaagata attttgggca gcaactacgt
     3541 cgagtctgtt tatttcagac atcatggact tagttaaacc gcctttaaag tttgtggaca
     3601 aacttgtatt atactcttta ctctgaattt tcatagcttc cctttactca atgtaaaaca
     3661 actaaatata ttttttacta ttttggataa tcatacttta cattttttaa tattcaaaaa
     3721 aatacactat taaaattaaa gatttcgtgc taattattaa ataaaatgga attaatctaa
     3781 tgaacatttc tcaaattagc tgtaaacata ttcgtaagag taatatcact tttagttcga
     3841 ataattctga gattacgcca gacattctag acgattttct attaaataac aaacctgtat
     3901 taaaacagtc ttatcaagat ttgatagaat tgcgacagtc tgaatttagg gatgaacaca
     3961 ataagtttac acttaaaaga acacttaatg cagaaaatga aactttaaca gaattatttg
     4021 aagattttaa aaaactgttt gatgattctt atatctgtca aaaaatcaaa aatagtcaga
     4081 gcaaagagta tttaggactt ataaataaaa tagcagatga aagtgaacaa aataaaattg
     4141 attataaaaa agaagtatct tattttgcta aagatgtaca aaactccaaa tttgttaata
     4201 caattgaagt acccaagata agctctaatg ttgtagaagc aaatttagca cataatgtaa
     4261 taaatgatgt aaaaaaaatc ttctttactt ttaaagattc tgatactccc ttaataaagg
     4321 aatcaaacaa agcttttact gatattacca aaaattatct tcaatattac tctgattcta
     4381 caaaaagtat aaaagcaatg cataaaggct ctgaaaaatg gttagaaaga atccctggtg
     4441 tggggcttag tgcacgtgta aacagagtcg cacaacagca ggaatgtgca aaatatgttt
     4501 atgaaacaca caatgcatat tgcaacaaat atattcataa tggaatacgg ccgatagcac
     4561 ttgcttacaa agaaaaagta gtacaaaccg aaaattatat taattgggct tctcctcatc
     4621 tgtcatataa agaaaatgaa tatgtaaata cagctttgtc aaatatgaaa aaactcgcaa
     4681 agccacacct tgaacgttat atgcaaataa tctcgacaat ttcacaaaaa agtgaaatca
     4741 ttgcatcttt ttgtaaagca ataaacaata atggtgacat atcttctata agtaaagcaa
     4801 taagaacaat tgcgttcttg ggtttttaaa aaaagaagta agtaaaacat gctcaacacc
     4861 tccataaata cccccttcat aaattataaa tctgcaaaat tatctacaga ttcttctaaa
     4921 tcagcaatat cttataaaat attgcctgat ggacatagac ttgcaattgt caataaaaac
     4981 ggaggctgtt taataaaaac ttttgttgac acgcataaag caaattactt ccactcacat
     5041 attttagaac atctactggc agatattaat aatctgaaag aaggagaatt tttggaaagt
     5101 ataggtactt ctaaatatgc tgaaactgct caaaaatcta caaactattt attagaatca
     5161 ccttttgatg atagaaaaat aatttacgat ttaataaaaa cacaattcaa tattttaaat
     5221 aacaaacaga atattttcaa atctcttcaa aaagaaaaat ttgttttaaa atcagaatat
     5281 gcttttctag aagataatag aaaactatct gagctggata aagaaaaaaa ggatatacaa
     5341 gataaaacga ttaaagcaat atatcaaatt gattcagtac tcaatgaaga taatggttat
     5401 agttcagact tcattgataa gacttcaaca agagaccttc aatatcttta tgaaaaatat
     5461 tatcagccag aaaacatgac aactgtcgta gtttctcctg ccaagcctga agaaattgaa
     5521 aaggaatttt taaaatactg taaaaaaaat aatattgaac atcgtcctaa cattacagtt
     5581 aaaccagttg caaaattaaa taatagaata agagctgatt atttttctaa aaattttatt
     5641 gatgataata tagcgattta tttcaaagcc cctgactgga aaaacactaa agatgtattg
     5701 atttcacaat tgattccttt aattataaat aacaacagta atttgtttaa tattgaaaac
     5761 tttaatgcaa atgttataaa tttacgtgat gatttaatta tacttcatgc ctcttccccc
     5821 agacggcaag aagaaaaaac tttggcacaa ataaataaac aacttaccga attaactcaa
     5881 aaagctgtga aacaagagaa tttggaaaat gcaaaagcaa ctttattaaa cacgatttct
     5941 ttaaaaaaag aaattgctcc acttcttctt ggagaaatcg aaaaagcaat tttcaatgat
     6001 acattaaata ctactttgca aagtgaagat atagttaaag acataacaac ttctgacata
     6061 caggcttttg ctaaaaaata ccttgatata aataaatcat acaccgtggt tattcacaat
     6121 cctaatatat taccagctgc tttttgcaga ttttcttctc cttttttaaa aaatatcagt
     6181 ttcaaaagta atatgaatta tttggatacc ggaaaatttt atgaatacaa atatccgtca
     6241 aatttacgct tgacagtaaa tgctgacaaa aaaattaacc gtgcaagcta tttgcttaaa
     6301 ttcgattcta aaggcaataa attaacagat aatcctgtag aaatgaatgt gttgttaact
     6361 ttgataagat taaatataga aaaaaatatc gataaaaagt ttaaaaatca ttgtcatata
     6421 aattttgaca atgattgtat aagtattgac ataagctata cgccggccct tttgaaagac
     6481 atgatacaat cattaaattc aagtatacaa aatgtaagtt ttgatgataa attagtacta
     6541 aaagcaaaag aaaaagcaaa attgtacagt gaaattgatt caattttgtc taagcagtat
     6601 agagtaaaga atttagatga ttcctttcaa aaaataacaa gtcaaaatct taagaagctt
     6661 tataatgata ttcttaaaaa ctgcgaagca aatgctgtac taataattcc tgaaaattat
     6721 tttacaaata ataaaaatga catattatcc cttataaata agggatttga aaagcaaagt
     6781 tttcctgaaa aggttgaata tcacacagat tatttcaaac agaattcttt tgaaaaaaca
     6841 aaagtgatat gttatgaatc agatgtcaat aattgcagtg taacacaaag tttcagagct
     6901 acaggaatag gacctaaaaa agatttaacg ctgactcttt taaacactgt attaggtgac
     6961 tcattaaatt ccataatgct aaaagagttg agacttaaaa aatgtttata tatatgtaat
     7021 tcacattatg gctcaaaaga caatgtagca tatatacata tgcttagtga atttaagcct
     7081 ggcaatgact ataattacag tataaaggat gcattaaagg attataagaa atttgttagt
     7141 gaactgtcta acggagaaat agaatctaaa ctatttgaaa atgctaaagt acttgtaaaa
     7201 gcaaatatag catacttgaa caatgcttca gaaggtaagt tgagtttgtt aaaaaactat
     7261 gacgcacaaa cttacaaaaa actgtattcg ataattgatg agataacaat agaagacata
     7321 aaacaagccg caaaagaggt attggacaag ccttctttaa ttgaaattaa agtgcctaaa
     7381 gatgttctta agaaaaatat gccctttttg atgacaacgg gcgaagtgca tatttaatag
     7441 agaaatctag gttaataaat caaaaaaaat gtctacccca tggtcaagac cattttctaa
     7501 actctgttca ataccatgtt ccaggccttg ttctacaccg tggtcaatac tgtgttcaat
     7561 ggcttgtcca taatgttcaa cggcatcaat cccaatatcc agatgcttat caatagcatc
     7621 acttatatca aaatcttttg gatttaaatc ttgtacattc acgttttctt ttgcgccagc
     7681 aaaagtaatg atatcatttt tccctgtttc atcaatgtaa ttacgtttta tatctcttat
     7741 aagactttct ttttcatatg aaggcatatt agagttttca acctgtttga ttatcgattc
     7801 ttttgcagaa tgagtaagat gtccgctgtc agtcattgga ggatcccagg gtttattagg
     7861 taaaaattct tttggtattc tattaattaa tatagttgta tctgtatatg ttgtagaccc
     7921 agggccatat tggacatttc ttaatgtttc ttcgacaaac ttagaatcaa aatcttttcc
     7981 tttttctagc gccattgccg ctgtaagtgg tttattagca acaggtaatt ttgcagcttt
     8041 ggacttttgt gaaaatattt tgccagcacg gttaaatact aactctttta cttgttttat
     8101 taatttgttc acaggtaatt tttcagattt aacaataaaa tttattcctg atttataatt
     8161 accgctaaat gaaggattat ttttgtttac aagattataa ttgcagttaa tatttgctat
     8221 tggtctaatc ataaaatatt tccttatttt aactttatga tattcaaaaa aaagttttta
     8281 tcaagtaata tttttgaaaa gacaaaatat atttatctat tattcttttt tgactgtgat
     8341 tttcctgttt gatacaggtt gtccagctct tcgcgttttt ttatgctgtc tttgctgctg
     8401 tttaatatat caattgtttg atcaccaagg ttgaaggttt tactgtgttt ggtgatttct
     8461 attgctttgt gtgcattttt agtagtagat aatgcaagca gcattatatc tgtatttgta
     8521 ctatttgtgc attgttcata tgtttgagcc aggtctgttt tactcagttt gcaagttgat
     8581 tttagctttt caagcacctc aggctgttcc aatgcagctt gaagtaggat tttgttgctt
     8641 ccatatgttt ttaatacatc aagaaatgca gggtcgtgca agttttccaa cacctgttca
     8701 gccagtgttc caaattgtat tgtaagctta tggaaaactt tgtctctgtc atagctttta
     8761 ccgtttatgg taacgacttt ggctgatatt tcattttctt gttctttaac ttttgtagtg
     8821 tcgttttctt gcttgtttac gtaaaaccgt tgagttgctt gttgagaggt tttattttgt
     8881 attggattag ttgcgcttat ctttgctgtt gtttcggatt ctttggatga cacattgttt
     8941 gtgacagtga cagatgatac tgtttttgcg gaatcattta tattgttagc ccgtgcttct
     9001 tttgcacatt gtgagctgta ttttacaatt tcatctgctg tgtaatttcc gttttgaatt
     9061 ttttccatta cacggtcttt tatttcagga tgttttgaaa tgtcacttgc aattgagtta
     9121 atatcactac cgcttaactt tggattttga ccgagttctt ttactgtttg ggtatatgtt
     9181 gcacagtatt tagagctagc gttaacaagt tcatttgatg ttgaattgat attgccggct
     9241 gtgaatttat ccttgttatc aatgttcttt gccgttgcct gatattcaac aacttcgctc
     9301 atttctgggt tatcaaacaa gtttttggaa atgttgccta aaaactcttc tgtcatatct
     9361 gatttttttg ctacagccat tgttgcagat ttgatttcat tttttagtgt tactctttct
     9421 gctacatcta gagtcgtatt tgcagtatat tttatttggc ctttttcgtt tgttattgct
     9481 tccatttctt gagcattttg cgtatattcg tcagcttttt taacattgtt acttataaaa
     9541 gttgctgctc ttgtaacatc tttttcagag tagtatttat ttttgctgtc tgcatctttt
     9601 acgacaaaat gcataacatt gtctttgatg tccggctctt ttgtcattat tgtagcaatt
     9661 tgtgttgtgc cttcagaggt gaaatcttct cttttttcac ggatttgtcc catattttca
     9721 ctcaattttc cggcatagta gacggtttca ctttttgcca gcttttcaaa ctcttcgtaa
     9781 tctgtaaaaa atgtttttat ggaattacca accctcttga gccagcttga aggtttataa
     9841 ttttttatac tttccattgc actatagata tcgttagcac ttaatttttc attttgtgct
     9901 atttctaaaa atgcttttaa tttctttttg tcagtaataa ttcctgctag tttttccttt
     9961 tgttcatcac taaagccgat attcaactct tttagaatat cagcgggatt tttcttatat
    10021 ttttttacca gctccgaaat attaaaatca cgattgagct ttttatcctc tttttcaacc
    10081 tcagttccgg tcataggcaa taaatcattg ttaaacactt gaatatccgc tgtgtctttt
    10141 ccttcttttt ctgcttcaag aagttgcgac tgataaaaac tcagcgaatc tgtccatttt
    10201 attgaactat cgtatgtgat accgtagctc attctctctt gttgtccttt tctctctttt
    10261 aatacccaag tgtagataca taatcttgtg cttatatata taaagtatgt tgtttttatt
    10321 ttattgctat aagttttata aatattacaa attgttaagc tgtccaaatt atttgggcag
    10381 cttatattga ttgatatgca attttttaca tgaatctttg tgcttgtgct tccacaatgt
    10441 cagcttgtct taaaacagca tctatctgtg cagagcggct tgatgcagga ttaacaggtg
    10501 cttcgtatcc taatatcggg tttgggatat atgttcttgt tatgcctgct tgatattcgg
    10561 gagttttgag ctcacttgat gcaacaggtg attgctgcat tgattgtgca cctattggat
    10621 tttgtttttg ttgatattgc tgctgcattt tatcaacaag atttcccggt tttccgcttt
    10681 gatatgtttg cacattttgc ggttgttgtg tattcaattg cggttttggt tcttgaggtt
    10741 taacaataga ttgtgtcggg tttgtattag gctgttgcgg cttttcttga acctgctgtg
    10801 gttctttnnt ctttaccttc attcttttct ttttcgagag tttttacagg tttgccaaat
    10861 attgcatacg aaagtttttt tgctgtgcct gagaagattg gcagaacaac tgccataaga
    10921 agggcaattc ttcctgcata accggcacca acttttaatc cgtatggtat tttagccaat
    10981 gaagttgcaa atttgttatt tttaagaggt tttattgttt ctcttattct tccgtagctt
    11041 attaagttgc caagccattt tacaggtttt tgataccatt tcaatgctgt attacctgct
    11101 gcagctgcac cttttttaga tacattctgt aattttttaa tttgtactaa agtttggtca
    11161 tatgctgctt tatttcctgc tttagcagct tcgtttgctg tttgtttaag ttgttgtact
    11221 gtttttacat ttgcttcaga cataccgata tttttaagac cggcaagtga attcattatt
    11281 ctcatttgaa taccgattgt agccatcatt gccatcaatt ctgcaaatga agccataaat
    11341 gttgagaatt tttcaccttt ttctgctttc atagcttctt gcaatgattg tgctatgaaa
    11401 aaggcctgga ttaatactgc accttttcca gaaaacatnn nnnnnnnnnn nnnnnnnnnn
    11461 nnnnnnnnnn nnnnnnnnac tttactgttc gttgatttgt aatagtctat gagtttagat
    11521 ttattaacta tttctaaaag acttgattcg ttcttaacaa gtccaagtcc ccaccagggt
    11581 cttttagaga atgattttgt taattcatct tttggtagtt tctttactgc ctgtccaaac
    11641 tctttaagga tttcatcctt gaataaagaa gcatcttttc catatttgct tataatagaa
    11701 tcaaagcctg tataattagg gttagcttct ttatattttt tcattatttc cattgcgcgt
    11761 gtagcaacat gtccttttga gcctgcagct tgtgattgta cctgactacc gccaatactt
    11821 tgtttgtatc ttaaagttct gtatatttct gatttattta atttgttcga taaccattgt
    11881 tttttcttgc ttaaatagtc taaaaccgaa gatacttttg gtttttggac aaaattattt
    11941 actttgtttt ccactgtatg ataaaaagta tcttcataat tttttgtttg cagtggtttg
    12001 ttcataaaat tggtcaaacc aattaatgct gtaccaaacc ccagtgtgcc taaaggaagg
    12061 agaagaggat tgtcacttgc acctttttct gctcgactga gaatagggtt gttattaaca
    12121 atcgcattac cgctagaaac agtaccgttt cctgctgtaa aatttggctg ctgtgtatac
    12181 tgattgttag tataaaccag ctgatttggc tttaaatttg gaatattttg tgacatattc
    12241 tacctgtaaa taccttccac ttattataat aaaaacagat tagtgcggtt tcttgtctta
    12301 aaatcgtatt atgttaattt ttattaacaa aaaaataccc gcttatataa aagcgagtat
    12361 ttttaatttg ataaataatt tattattcag cagcttcttc agtttccgga gcttcttcta
    12421 tttctgattg aagtatttca gaagctgtaa cgataacagg taattcagtt ttaactttag
    12481 aagtcaattt aattaacatt ctgaattcac caactttgtt gatagcagca tctaaagaaa
    12541 tgatttttct gtcaatagat gtacctaatt tagcgtttaa ttcttctgct aattttttag
    12601 tagtgattgt accgaataat ttacctgatt caccggctct tgctgataat tctaattttt
    12661 caagagcttc aattctttga gccaattcaa gagcttcctg atgaagtttt tcttgtttag
    12721 ctttgattct tgccaaattt tgttctctgt tttttaaagc gcctgctgta gcgatttctg
    12781 caacattttg aggaatcaaa aagtttcttg cataaccgtc tttaactgtt actacgtcgc
    12841 ctgcttcgcc aacgttttgt acgtcttttc ttaaaataac ttgcattttt tattctcctt
    12901 tgtgcattat tatcgagttt aacattatcg taataaaaac atactgaatt gtcaccactt
    12961 ttgagagaat ttttttaatt attgtataat ttttgtaatg attacgactg ataagaaaat
    13021 tgaactgctg gctcctgcaa aaaataaaga gtgtgctttt gcggcaataa atgctggcgc
    13081 agacgctgtt tacctcggtg cagagtcttt tggagcgcgt aaaaaggccg gtaattctat
    13141 tgaagatata aaagaaattg ttgaatatgc acataaattt ctggtaaaaa tttatgtaac
    13201 tgttaacaca atattttttg ataatgagct ggatgatgtt gaaaaactta tctggcagct
    13261 ttatgaaatt ggtgttgatg ctgttatctt tcaggatttt tctttttttg aaatgaatct
    13321 gcctccgatt gccctgcatg ccagcaccca gtgcaacaat gattctttag acaagataaa
    13381 atttttaaag cagctcaatg tagaaagagt tgttctccca agagagtatt ctttaaaaga
    13441 aataaaaaat gtaactgaaa atgttgatat tgaaaccgaa gtttttgtac atggcgcact
    13501 ttgcgtaagc tacagcggac aatgctattt tagtaattat gtcggaggca ggagcgcaaa
    13561 cagaggagaa tgcgctcaac cctgcaggag aaaatattct cttgttgatg acagggggaa
    13621 tgttctgctg gaaaaacaat atctgctttc tatgaaagac aacaacctgt ctgctcattt
    13681 gaaagagctt atctgcgcag gtgttacttc tttaaaaatt gaaggcagac tcaaagacaa
    13741 agagtatgtt acaaatgttg tttcttatta cagacaggca attgacagta tttcaaaaac
    13801 actaaaagct tctgaaggcg aaatcataac ttcctttgtg ccaaatcctg ataagacttt
    13861 taatagaggc tatacaaatt tctactttga cggaaaaaga aaaaatttta ttaaccctct
    13921 gactccaaag tttatggggg aaaaaatagg aacagtaaaa tcagtcaaag ggaaaagtgt
    13981 tgttattgat tcaaaacaca accttaaccc aggtgatagg cttgcttatt ttgatagaaa
    14041 caatgacttg acaggcacaa ccgtaaaaac cgttaacaaa accgcaatag aagtgctgga
    14101 tgcttcttcc ataaaacagg gaacagtttt atatagaaat tatgattcgt tgttctataa
    14161 atcattaaat tcagcagagt ttaaaagaaa aatacccgta aagatatttg ctgacaataa
    14221 aaaaatagtt attaaatctt ttgataacaa tcaaattaca tatgagtata aagaaaattt
    14281 tgaaacagct aataatattg aaaaggcaaa agatacaata gcaaaacagc ttgctaaatt
    14341 gggacacaca gaattctttg ccaaagaaac agttattgat gaagcattta acctttttat
    14401 ccctgtctcc aagttaaatg aaataagacg tgttgctgta aaccaacttg ttttaaaatc
    14461 taaaaaaaat tataaattcc aaagacgtga tacaaagatt gagtataaag attatccatt
    14521 taatgtgctt gattattcgt ttaatatctc taatacaaaa gcaaaagatt tttatgaaaa
    14581 atgcggctgt aatataaaac aattgggaaa acaatgggca cctgagcata caaaatgccc
    14641 aaatattacg cttatgaaga caaaacactg tttaagggat tttgctggta tttgtcttaa
    14701 aaagaacaaa gacacaagaa agctattttt aattgatgaa tatggtaaaa aatacccgct
    14761 caattttgat tgtaaaaaat gtattatgaa aatagaaatt acagatattt aattttatag
    14821 aaaggtttta tatatatgag agtcaaaaaa acacatatta tagattcagt agtgcgtgca
    14881 gctgctaaaa aaagagttca acctgcaaat catcaaaata aagttgagtt gaaagggatt
    14941 cctgatacag atatagtaga gtttatgata gactctttta atgcacaaat acaggatcag
    15001 aaaaaaagag atcttgaaaa catattaaaa tcttttattc agaagtaaaa aagagtacct
    15061 ttaaggtact ctttttgtta tgattagata accatcctta ttcttcgtcg tcttgagctt
    15121 cgacttcttc ttcaggaact tcttccatca tgtcttctgc atcaatgccg tattcttctt
    15181 ctacgatagg ctcttcttct gtttctattg tttcttcaac atattcttcc tcaacaggtt
    15241 gttcttcata ttgagcctga taagctgctt cagcttgagc tgcttgagat tcgtttttga
    15301 tatcaatttt ccagcctgta agtttgtgag caagtcttac gttctggcct tctctgccga
    15361 ttgccaggct caactggtcg tcaggtacaa caacgagagc ttcatgtgca ttttcatcat
    15421 cagcgaggat gtctacagag atgattcttg caggagacaa tgcgttaaca atgtattcta
    15481 caggatcttc tgaccatctt acgatatcga ttttttcgtt tttcaattca ccaacaatag
    15541 tttggattct tgaacctctt ggcccgatac aagcacctac agaatcgatt tcagggtcgt
    15601 ttgagtgaac agccagtttt gttctaaagc ctgcttctct ggcaattgat ttaatttcta
    15661 caatgccgtc ttcgatttct ggtacctcaa gttcgaacag ttctcttaca atttcagcgt
    15721 gagcgtgaga aacaataacc tgcggcaatc tgtttgtttc ttttacgtta agaacaaata
    15781 ctctgattct gttgccgggt ttgtagtatt ctccaggtat ttgttctctg aaaggtaaaa
    15841 ttgcgtcagt tttgccgatg ttaacaaata catttctatt ttcaacacgt tggatgatac
    15901 ctgtagtgag tgtacctttc ttttcaagga attcgtcaag aacgagtttt ctttcagctt
    15961 ctctgattct ttgagtaatt acctgttttg ctgattgagc tgcaatacgg ccgaagtttt
    16021 caggtgtaac ttcgatttta acttcgtctt cgagttctac ttcgtcgtcg atttcttttg
    16081 cgtcttccaa agaaatttca aggttttcgt cttcaacgtt ttctacaacg agttttgttc
    16141 tgaaaacacc gatttcacct gttacttcat caagaattgc ttctacattc ggtgcttctt
    16201 ttactttgat atgtttttta taagccgcaa caagcgcgtc ttttaaagat tcaataatta
    16261 cttcttttga aatccccttt tctctttcca gttcttctgt tgcttcaaaa agagccgtac
    16321 cgattttaat catctttttc tcctttttat atgtcttcta tatgtaattg tgctctgtgt
    16381 attttatctt ttggaacaac tagttccttg ttatcatctg ttttgagtac ttttaaaccg
    16441 ttttcagggt caaagtcaag aattttgcat acaaactgtt tttcgtctgt gccttcaacc
    16501 agtgttttta gcttaaggtt tataagtttt ccctgaaaaa taatatattc tttatctgat
    16561 ttaagttttc tatccaatcc gggtgagctt acttccagat aaaatttaac cggtattaat
    16621 tcatccaaaa acggatttaa gcttcttgaa acattttcac agtcatcaag agtgacaccc
    16681 tcttctttat atagaaatat acgcaaaaac cactttccgt tttccttagt gaagtcaatt
    16741 tccagtggaa taagattgta tctcatcgct gtattgtcaa tgagaggtac aagtttatcc
    16801 aatatttcat ttttattaaa gtgtttagat tccataatcc tgctcaataa ataaaaaaga
    16861 aacgggaacg ccgtttcttt tgcctaacat atttataata acattaaatc tcaaattttc
    16921 aacttttata atgtatctct ttatcaattc ttaattttta agttgtagac taacaaattt
    16981 gttgagttat aatttaattt gtaaaccgga tttggagttg gagttcttta atggaagaaa
    17041 ataataaaaa atgggtggat ttcaatattg atttggccca aaatgaccaa aatgcagata
    17101 caatcaatga gcttattgaa gaagtgagct ctgttaatat tgcctgtggt gtgcacagcg
    17161 gcaacccact gagtatgaaa caggcggttg aaaactgtaa attta
//
LOCUS       DABS01000177            6668 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_18304, whole genome shotgun sequence.
ACCESSION   DABS01000177 DABS01000000
VERSION     DABS01000177.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6668)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6668)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6668
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..362
                     /locus_tag="CPT85_08070"
     CDS             <1..362
                     /locus_tag="CPT85_08070"
                     /inference="COORDINATES: protein motif:HMM:PF10431.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21299.1"
                     /translation="KDKVMDLMKEHFKPEFLNRIDEIVFFKALTLSQLQKIVDIYFKG
                     LEKLFADRDMKLEITDDAREVLATQGFNPVYGARPLKRTIRQLVENPLAKKILSGEFK
                     AGDTITVDANGDEIVFR"
     gene            complement(355..978)
                     /gene="serB"
                     /locus_tag="CPT85_08075"
     CDS             complement(355..978)
                     /gene="serB"
                     /locus_tag="CPT85_08075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011373283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="DAB21300.1"
                     /translation="MNKLAVFDFDSTLMDGETIEIIASEIGLQEQVAQITKRAMEGEL
                     DFFDSLTYRVSLLKGISEKRVNEICHSLPYMPGAKETITALKNKGYIVVCFSGGFKNA
                     TEYAKDILGYDADFSNILHTKDGILTGQVGGEMMFSDSKGQMLQKLQTILKVTPENTI
                     AVGDGANDLSMFKHAKTRVAFCAKQCLAQEATLVIKNKDLTQLLNII"
     gene            complement(998..1444)
                     /locus_tag="CPT85_08080"
     CDS             complement(998..1444)
                     /locus_tag="CPT85_08080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013386829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="DAB21301.1"
                     /translation="MQKINLKIQKLDEKVTVPCYQTEGAAGMDLCAFLNEPVTLKSLE
                     RKLIPTGLKMELPHGYEAQVRPRSGMSIKHGITLVNCVGTIDEDYRGELCVPVINLST
                     EEFTIQNGDRIAQMIIAPVTKAEISVVTELSDTQRGEGGFGSTGKN"
     gene            complement(1508..2512)
                     /locus_tag="CPT85_08085"
     CDS             complement(1508..2512)
                     /locus_tag="CPT85_08085"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21302.1"
                     /translation="MCDRPHECWLVKNPHPWFGNFKILTRQYNEIVQWNKEYILWKTP
                     KNAKLKERFIHCQTVYLPCGKCIQCLVKRSNSWTLRSSLELQKYDKACVLTLTYRDSD
                     LPENGNLNYKDVQLFLKKLRNRTKQKIKMMCCCEYGSKTLRPHYHIILFNYFPDDIPK
                     IGDQLKWYKRTRKGSLLFKSKFLENLWSHGFVDVGLVNHQTCRYVSQYCCKKVFKTSK
                     DYVDKIKEAPEKLVCSVGFGLDWFLRNYRAVIDSGKIILGGFTFAIPRYFIKKLEFIN
                     KPLFDKYKEKLHNLFLNYNYDSEEQKRMLARSDRLKQKFGIFHTFEDSKEKLDFLHNK
                     "
     assembly_gap    2565..2570
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2769..3539)
                     /locus_tag="CPT85_08090"
     CDS             complement(2769..3539)
                     /locus_tag="CPT85_08090"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21303.1"
                     /translation="MDPASIAAIVGAGSSILQSATGFAQPFLTYEQNLSLQRDAQAWQ
                     ERMSNTAHQREVSDLRAAGLNPILSATGGNGASTGSVGANTAQGFGNMTSPSEILGLF
                     NNAAQVDNLRANTANQQMNTVKQNAEMLHEYKKIDNTIADTRLKIKQGNLSDQQIKNL
                     QKELEMYEYQKAQIQSVIQLNGANASNALEGAKAQQALVQKYKAETEIASAGAADARR
                     REQAIKRHLVSSSWSRNVGIWTEELGKLFSAGVSRHYK"
     gene            complement(3541..4671)
                     /locus_tag="CPT85_08095"
     CDS             complement(3541..4671)
                     /locus_tag="CPT85_08095"
                     /inference="COORDINATES: protein motif:HMM:PF02305.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21304.1"
                     /translation="MFKRAKKHDYFTSALPFQQKGAPQSLSIGVSAPVVGTGKSLGFI
                     DTVTTSDNVRLLSTSGTLGQNLFTTSPNIGTAVGQQVGTTGSIGLSTNKNLSGLVADL
                     QNVTGFTISDLRVAIQLQALKELDARCGTRYKEYVKGHFNVTISDATLDRPEYLGGYS
                     VPFNIIPVANTSGNSTDPQGNLSAFGVTNTSTYRCFSKAFEEHGFVIGFACVRSTQSY
                     QQGLNRMWSRKNKYDFYDPLLANLSEQSIKMKELLAQGSDIVDSEGNPVDEKTFGYQE
                     AWAELRYKPNMITAQMRSNLKNPEKSLDVWHLSQVYEPQVDNGENLGVPLNQEFIEEN
                     PPVDRVVAVFDEPHFFSDNYFDYKCTREVPLYGIPSYLLGRL"
     gene            complement(4675..4917)
                     /locus_tag="CPT85_08100"
     CDS             complement(4675..4917)
                     /locus_tag="CPT85_08100"
                     /inference="COORDINATES: protein motif:HMM:PF02305.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21305.1"
                     /translation="MLNSGKTGVEVGSIFDYAGIPVNVPNLEFSALPFRAMNLCYNEW
                     LRDENLADWLNVGGSKGPDGNYDLDSEFGDSDDIEN"
     assembly_gap    5018..5029
                     /estimated_length=12
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5361..5984)
                     /locus_tag="CPT85_08105"
     CDS             complement(5361..5984)
                     /locus_tag="CPT85_08105"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21306.1"
                     /translation="MVKSNESSFTVEAASASVDSSINDSLTGSAVKDDQLKNIPYHTR
                     LNPPVKRVFKFTKPTRVQESPLDARSPQEVLDYHGMYKDDSLYKNNPNAVHLDLTAFD
                     DLQTSMNKNILAQEKFNQLPVDVRARFNHSIVEFTQRVTSPDFDINEVLLPEEQKAYS
                     AYKADEKARKEYESYLNSSEYKQQIQEAALRKQFEKEQFEAWKASKK"
     gene            complement(5971..6168)
                     /locus_tag="CPT85_08110"
     CDS             complement(5971..6168)
                     /locus_tag="CPT85_08110"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21307.1"
                     /translation="MIEKIDYCIDSVNQLIDYVFTQIRSSDSVSTGRRYFPLLAVAQH
                     AKDSYVSIKDNLERDLKNGKK"
     gene            complement(6165..6512)
                     /locus_tag="CPT85_08115"
     CDS             complement(6165..6512)
                     /locus_tag="CPT85_08115"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21308.1"
                     /translation="MAKKYLVFSVYSPDIEDYPYFPFFGKSVTEGVRLFMKFIESKEY
                     ICPNPELHLLGECCEVNGRYVDIQPFMFPKRVEVVDNIFGRCCVLAFHYYHKICLYLE
                     RLMLSHTPRKVKK"
BASE COUNT         2210 a         1266 c         1084 g         2090 t
ORIGIN      
        1 caaaagacaa agttatggat ttgatgaagg aacatttcaa acccgaattt ttaaacagaa
       61 tcgatgaaat tgtattcttc aaagccttga ctctttctca actgcaaaag attgttgata
      121 tctattttaa aggactcgaa aaactgtttg ctgacagaga tatgaaactg gaaataacag
      181 atgacgcaag agaagtgctt gctacacaag gattcaaccc cgtatacgga gcaagaccgc
      241 tgaaacgtac catcaggcag cttgttgaaa atcctcttgc aaagaaaatc ctctcaggcg
      301 agttcaaagc aggtgacaca attactgttg acgcaaacgg tgatgagatt gtgtttagat
      361 aatattcagt aattgggtta aatctttatt ttttataacc aaggttgctt cttgtgccaa
      421 acactgtttt gcgcagaagg caaccctggt ttttgcatgt ttaaacatac tcaggtcgtt
      481 tgctccgtca cctactgcta ttgtgttttc cggtgtaact tttaaaatag tctgcagctt
      541 ttgaagcatt tgtcctttgc tatccgaaaa catcatttct ccgcctacct gtcctgtgag
      601 tatgccgtct ttggtgtgca agatatttga aaaatctgcg tcatatccga gtatatcttt
      661 tgcatattct gttgcgtttt taaaaccgcc tgaaaagcac accacaatgt agcctttatt
      721 ttttagggct gtaatggttt cttttgcacc tggcatgtaa ggaaggctgt gacagatttc
      781 atttacccgc ttttcagaaa tccccttgag cagtgaaact ctataagtca ggctgtcaaa
      841 aaagtccagc tccccttcca ttgcgcgttt tgtgatttgt gcaacctgtt cttgcagtcc
      901 gatttcagag gctataatct ctatagtttc tccgtccatt aatgtcgaat caaagtcaaa
      961 gacagcaagt ttattcatat agaaacctct tatttttcta atttttacct gtggagccga
     1021 atccgccttc gcctctttga gtatcagata attctgtcac aaccgaaatt tctgcttttg
     1081 ttacgggagc aataatcatt tgcgcgattc tgtcgccgtt ttgtatggta aattcttctg
     1141 tagaaagatt aataacaggc acgcagagct ctcctctgta gtcttcatca attgttccca
     1201 cgcagtttac cagtgtaatg ccgtgtttta tggacatgcc tgaacgaggt cttacctgtg
     1261 cttcgtatcc gtgcgggagt tccattttaa gtcctgtcgg gataagtttt ctttccagag
     1321 attttagggt tacaggttca tttaaaaatg cgcacaaatc catgcccgca gcaccttctg
     1381 tttgatagca gggtactgtt actttttcat caagtttttg tattttcaaa ttaatctttt
     1441 gcattgtatt tacttcctct ttattctctt gtgctattgt agcaaaaatt ttgcaggcat
     1501 gtggatacta tttattatgt aaaaagtcaa gtttttcttt tgaatcctcg aatgtatgaa
     1561 atataccaaa cttttgttta aggcggtcag agcgggctaa cattcgtttt tgttcttcgg
     1621 aatcataatt ataattaaga aacaaattat gtaatttttc tttatattta tcaaataatg
     1681 gcttattgat aaattctaat ttttttataa aataacgagg tatagcaaat gtaaaaccac
     1741 ctaatataat tttaccagaa tcaataacag cacgataatt acgaagaaac cagtctaaac
     1801 caaagccaac agagcaaaca agtttttcag gagcttcttt aatcttatca acataatctt
     1861 tagaggtttt aaaaactttt ttacaacaat attgagatac atatctacaa gtttgatgat
     1921 taacaagacc tacatcaaca aaaccgtgag accagaggtt ttctaaaaac ttagacttaa
     1981 ataacaaaga acctttacga gtacgtttat accacttaag ctgatcaccg attttaggaa
     2041 tatcatcagg aaaataatta aataaaataa tatgataatg aggacgtaat gtttttgagc
     2101 cgtattcgca acaacacatc attttaattt tttgcttagt tctattacgt aattttttaa
     2161 gaaaaagctg aacatcctta taatttagat taccattttc aggtaaatca gaatcacgat
     2221 aagtaagagt aagaacgcat gctttatcat atttttgaag ttctaaagag gaacgaagag
     2281 tccaactatt actacgttta acaagacatt gaatacattt accacaaggc aaatacacag
     2341 tttgacaatg aataaaacgt tccttcaact tagcattttt aggcgttttc caaagaatat
     2401 attctttatt ccactgtaca atttcattat attggcgtgt taatatttta aaattaccaa
     2461 accaaggatg tggattttta acaagccaac attcgtgagg tctatcacac ataaacaaat
     2521 ctccataaat ctcataacaa taaaaaaaag cgggagtagc taacnnnnnn accgcctctc
     2581 ataaatgagc cgttaagatt ttttctatcg attctaaacg ccaaacgacc gaatttacta
     2641 tttgcgcgag atggtctgtt gtaaaatctt ttcatatgtt ataatccttt ctatggagtt
     2701 aatagtaata atcttatgtt tttacgtatg cggactaaga aaaagaattg aaaagctaga
     2761 aaaatcaact atttgtaatg acgagaaaca ccagcactaa aaagttttcc taactcttca
     2821 gtccaaatac caacattcct agaccaagaa gaagatacta gatgtcgctt gatagcctgt
     2881 tcacgacgtc tagcgtcagc agcaccagca gaagcaattt cagtttccgc cttatatttc
     2941 tgaacaagag cctgttgagc tttggcacct tcaagagcgt tactagcatt agcaccgtta
     3001 agctgaataa cagattgtat ttgagccttt tggtactcat acatttcgag ctctttttga
     3061 agatttttta tctgttggtc cgaaagatta ccttgtttaa ttttcaaacg agtatctgca
     3121 atagtgttat caatcttttt atattcgtga agcatttcag cattctgttt aactgtgttc
     3181 atttgctgat tagctgtatt agcacggaga ttatcaacct gtgcagcatt attaaacaag
     3241 cctaatattt cactaggact agtcatatta ccaaatcctt gagccgtatt agcgcctacc
     3301 gagcctgtcg atgcgccatt tcctcccgtt gcgctcaaga ttggattaag tcctgctgca
     3361 cgtaaatcgg atacctctct ttgatgtgct gtatttgaca ttctttcttg ccaagcttgt
     3421 gcatcacgtt gcaaacttag attctgttca taagtaagaa aaggttgagc aaaaccagta
     3481 gcggattgaa gaatgcttga gccagcgccg acaattgcag ctatagaagc aggatccata
     3541 ttacaacctt cctaacaagt atgaaggaat gccataaagc ggaacctctc ttgtacactt
     3601 ataatcaaag taattgtcac taaagaaatg tggttcgtca aaaactgcaa caacacgatc
     3661 aacaggtgga ttctcttcga taaactcttg gttaagagga acacctaaat tttcgccatt
     3721 atcaacctgt ggctcataaa cttggctcaa gtgccagacg tctagtgatt tttcaggatt
     3781 tttcaaatta gaacgcattt gagcagtaat catattaggc ttatatctaa gctcggccca
     3841 tgcttcctga taaccaaaag tcttttcatc aacagggttt ccttctgaat caacaatatc
     3901 agaaccctgt gccaatagtt ctttcatttt aatagattgt tcagaaagat tggccaagag
     3961 tggatcataa aagtcatatt tattcttacg tgaccacatt ctattcaagc cttgttgata
     4021 tgattgagtt gagcgaacgc aagcaaatcc aataacaaaa ccatgttctt cgaatgcctt
     4081 actgaaacat ctataagtac ttgtattggt aacaccaaaa gcagataagt taccttgggg
     4141 gtcagttgaa ttaccagaag tattagctac aggaatgata ttaaaaggta cagaataacc
     4201 acctagatat tcaggtctat caagtgtagc gtcagaaata gtgacgttaa aatgaccttt
     4261 aacgtattct ttgtatctag taccacatcg tgcatccaat tctttaagtg cctgtaactg
     4321 aatagcaaca cgtaaatcag atatagtaaa accagtaaca ttttgcaaat cggcaacaag
     4381 accagaaaga tttttattag tggacaaacc aatcgaacca gtagtaccaa cttgttgacc
     4441 aacagcagta ccaatatttg gtgaagtagt aaaaagattc tgacctagtg taccactagt
     4501 agaaagaaga cgaacattat cagaagtagt tacagtatca ataaaaccta gtgatttacc
     4561 agtaccaaca actggagcag agacaccgat agataaactt tgaggagcac ctttttgttg
     4621 aaatggtaaa gcacttgtaa agtaatcatg ctttttagca cgtttaaaca acttttaatt
     4681 ttcaatatca tcagaatcgc caaattcgga atccaaatca taattgccat ctggaccttt
     4741 agaacctccg acattaagcc aatcagctaa attttcatcg cgcaaccatt cattataaca
     4801 caaattcata gctctaaaag gtagagcgga aaattcaaga ttaggaacat taacaggaat
     4861 acctgcataa tcaaatatag aacctacctc aacaccagtt ttaccactat tgagcatagg
     4921 aacttgatat tctttattaa cagaagcatc atcatttctt ctacgctcac caaagaaagc
     4981 cttaaaatta ttccaaataa gacgagttgg aacataannn nnnnnnnnna tccataaatg
     5041 gatgaatagg agtaagtagt ctagtcaaat gtctggcatt agctttaaaa atatcaccag
     5101 gataaacctc atctacaaga aaaggaatac aataaccttc attaaatgct gttagatatc
     5161 tgtgacttct atcaaatgtg ctataaacta ttgaatcgtt tttagggact ctactgaaaa
     5221 cctcgttttt tgttaatgga gtaatactag ttgaaaccat aataaaatta accttttctc
     5281 ttatatataa ccgttacaaa cccagtaacg gtcacttggc attaatgtaa caagggaaat
     5341 ttgccaagtg acccttcggg ttatttttta gaagctttcc aagcttcaaa ttgctctttt
     5401 tcaaactgct tacgtaaagc agcttcttgg atctgttgtt tatactcaga tgaatttaaa
     5461 taagactcat attcttttct agccttttca tcagctttat aagcagaata tgccttttgc
     5521 tcttcaggta ataaaacttc attaatatca aagtcaggac ttgttacacg ttgtgtaaac
     5581 tcaacgatag aatgattaaa tcttgcccta acatcaacag gaagctgatt aaatttctcc
     5641 tgtgctaaaa tattcttatt catagatgtt tgcaaatcat caaatgcagt taaatctaga
     5701 tgaacagcat taggattatt cttatacaaa gaatcatctt tatacattcc gtggtaatcc
     5761 aaaacctctt gaggagaacg agcatccaat ggcgattctt gaaccctagt aggtttagta
     5821 aacttaaaaa cacgcttaac tggagggttt aacctagtat gatagggtat gtttttaagt
     5881 tggtcatctt taacagcaga acctgttaaa gaatcattaa tactagaatc aacagaagcg
     5941 gatgcagctt ctactgtaaa agacgattcg ttacttttta ccatttttta aatccctttc
     6001 caaattatct ttaatagaca cataagaatc tttggcatgc tgtgcaacag ctaacaaagg
     6061 aaagtatcga cgacctgtag aaacagaatc agaagaccta atttgcgtaa aaacataatc
     6121 aataagctga ttaacagaat caatacaata atcaattttt tcaatcattt tttaaccttt
     6181 ctaggagtat gtgataacat caaacgctcc aaataaagac aaattttatg gtagtaatga
     6241 aatgcaagga cgcaacaacg accaaatata ttatcaacaa cctcaacacg cttaggaaac
     6301 ataaaaggct gtatatctac atacctacca ttaacttcac aacattcacc aagcaaatga
     6361 agttcaggat taggacaaat atattcctta gactcaataa acttcataaa caaacgaacg
     6421 ccttcagtaa ctgattttcc aaaaaatgga aaatagggat aatcctctat atctggagaa
     6481 taaacactaa aaactagata cttcttagcc attagcttta acctctttaa ctagagaaat
     6541 aatctcaaca attacatcta caattttagg aatcaattca acacaaaatg aaaccaattg
     6601 tttaatagca attgcttttt ctgaaacaga cataaaaaaa cctcataatg ctgcgctaaa
     6661 tatatttc
//
LOCUS       DABS01000178            3151 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13469, whole genome shotgun sequence.
ACCESSION   DABS01000178 DABS01000000
VERSION     DABS01000178.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3151)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3151)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3151
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(72..1517)
                     /locus_tag="CPT85_08120"
     CDS             complement(72..1517)
                     /locus_tag="CPT85_08120"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02518.24,HMM:TIGR00229"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21270.1"
                     /translation="MIQGKSGVEKSECDIHFNINFLKFNNCKLATRAIPTEQLIVYSF
                     MVTKFGIEIMLNKKKACILVTSISVLFYALVSPYLLPGVTIDVKDAIFISYYVVSMIF
                     LIGLTCKREKVKLEQKIHLQHSQMETIINNAPFIMYLKDIDGTILLANHKISKLLGID
                     ADEVIGKNINNFYSRHNLCLNEDKEIITTKNTLCIQREIETPKGTFGWCKLIKAPVLD
                     DNGNVVSIVVIFQNIDKEKEIEERKNTFIATLTHDLKTPTIAQIKATELLLDNVLGEI
                     NDEQRDILTQIKKSCKYMYDLIFTILETYLYDEGQVKINRTNFCMPELIQEVIGEISN
                     LMREKEQTIHISADFNMHEIYADKIQMKRVIINFIANAITYGQNKTDIDINVEENEDS
                     LTFKVHNKSTYIPEEKLKDLYEKFKTNSNAKFKKAGTGLGLYLSKQIINAHKGEVFAS
                     SSKTGNCCFGFCIPKTTKTTQLEASCLQNKS"
     gene            complement(1465..2760)
                     /locus_tag="CPT85_08125"
     CDS             complement(1465..2760)
                     /locus_tag="CPT85_08125"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21271.1"
                     /translation="MKEDDEKLNIDLTVNKKANLSTMLGDFEFNISSSTVNNGIETKS
                     GSIGYSKNLKDVSISTNLEKTSSDFTYDTTVGVSHSFDNGISTNAQLFHSKDDTSLTV
                     GVNKKFLINPDNINNLENQDKVRKEELVETGERFNLQSKIGYSQEQNGLYTKNSLMYR
                     INNSNFLNTEYTQSNNNHEITATADLQKIKLEYKNSDTKEELLKTTTNTFNIMTKGVK
                     NQYNLGLNNSKIKINGEAPETNHNLNIEAGAKLNRTEYGEFNSGLXXELMLNGGKISG
                     YKLDLDGAYNHYGAENNSTTDYLVRSAVSFGKNNESKNVSAALGGDYRINNCNTIFEA
                     GAKYSSESAPSLKNQSFNTNFGVYQNLGRNFGDTVIFTQLETGKKWEQTPEAKNSLKY
                     VQVSFGSDAKVAKKLSLNTRMTYDTGEKWSGEVGVRYSF"
     assembly_gap    1968..1969
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2780..3127)
                     /locus_tag="CPT85_08130"
     CDS             complement(2780..3127)
                     /locus_tag="CPT85_08130"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21272.1"
                     /translation="MSITVKDLFQYDSNFDQAKIRRLTGKKDYKKSDIIDLSRLAALN
                     DKDLSIFVAKKEGKSFVNSIKDDNMRTKIADATGIKTENKQNNQSWNIPGNIPMNKSI
                     FTIAQETHGKTFS"
BASE COUNT          854 a          514 c          488 g         1293 t
ORIGIN      
        1 tactaaaaaa gaaccattag gctttaacgt aagctatcat tatttaactg accctgaatt
       61 tgagaaaaca tttaactttt gttttggaga caagaagcct ctaattgagt ggtttttgta
      121 gtctttggta tacaaaaacc aaagcaacag ttgcctgttt tgctgcttga ggcaaacacc
      181 tctcctttat gtgcgttgat gatttgtttg gaaagataca accctaagcc ggtaccggct
      241 tttttgaatt ttgcattaga atttgtttta aatttttcat acaaatcttt gagtttttct
      301 tcgggaatgt atgttgattt gttgtgtacc ttaaaggtta aagagtcctc attttcttca
      361 acatttatat caatatctgt tttgttttgg ccataggtta tagcgttggc tataaaattg
      421 attattaccc ttttcatctg tattttgtct gcataaattt cgtgcatgtt aaagtcggcg
      481 ctaatgtgta tggtttgctc cttttctctc atcaggttag atatttctcc aataacttct
      541 tgtattagtt ccggcatgca aaaatttgtg cggttaatct tgacctgacc ttcgtcatac
      601 agatatgtct ctagtattgt aaaaatcaaa tcatacatgt atttgcaaga ttttttaatc
      661 tgcgtaagta tatctctttg ctcatcattt atttcaccaa gtacgttatc taacaataat
      721 tcggttgctt tgatttgagc tattgtcggt gtttttaaat cgtgagttag tgttgcaata
      781 aatgtgtttt ttctttcttc aatctctttt tctttatcaa tgttttgaaa aattaccaca
      841 atacttacga catttccgtt gtcatccagc acaggagctt ttattagttt gcaccagcca
      901 aatgttcctt ttggtgtttc aatttctctt tgtatacaca gggtgttttt tgttgtaatt
      961 atttctttat cttcattcaa acacaggtta tgtctgctgt aaaagttgtt tatattcttt
     1021 cctattactt catctgcatc aataccaagt aattttgata ttttatggtt ggcaagcaaa
     1081 atagttccgt ctatatcttt taagtacata atgaatggtg cattatttat aatcgtttcc
     1141 atttgtgaat gctggagatg aattttttgt tccagtttta ctttttctct tttacatgtc
     1201 aaaccgatta agaaaatcat agatacaaca tagtaactga taaatattgc atcttttaca
     1261 tctatagtga caccgggtaa aaggtatggg gatacaagag catagaataa tactgatatt
     1321 gatgtgacca gtatacaggc tttctttttg tttagcatga tttcgattcc gaattttgta
     1381 accataaaac tatatacaat taattgctct gttggtatag cccgagtggc taatttacag
     1441 ttattaaatt ttaaaaagtt gatattaaaa tgaatatcgc actccgactt ctccactcca
     1501 cttttcccct gtatcataag tcattctcgt attaagagag agttttttag ccactttggc
     1561 atctgagcca aatgatactt gtacatattt taatgaattt ttagcttcag gggtttgttc
     1621 ccatttttta cccgtttcca gctgtgtaaa aattactgta tctccaaaat ttctgccgag
     1681 attttgatat acaccaaagt ttgtattaaa actttgattt tttaatgaag gtgcactttc
     1741 acttgaatat ttagcacctg cttcaaaaat tgtattacaa ttattaattc gataatctcc
     1801 gcctaaagcc gctgagacat ttttggactc gttgttcttg ccaaaactaa ctgctgatct
     1861 aacaagatag tctgttgttg aattgttttc tgcaccataa tggttgtaag caccgtcaag
     1921 gtctaatttg taaccggaaa tttttccacc attgagcatt aattctgnnt tcaaaccact
     1981 gttaaattct ccatattctg tacggtttaa ttttgcacct gcctcaatgt ttaaattatg
     2041 atttgtttct ggagcttcac cgttgatttt tattttggaa ttgtttaaac ctaggttgta
     2101 ctgatttttt actcccttgg tcattatatt aaaggtattg gttgttgttt ttaataattc
     2161 ttcttttgtg tcgctatttt tatattcaag ttttattttt tgcaaatctg ctgttgcagt
     2221 aatttcatga ttattattgc tttgtgtata ttctgtattc aaaaagttgg aattgttaat
     2281 tctgtacatg agggaatttt ttgtatacag accgttttgt tcttgtgagt aaccgatttt
     2341 tgactgcaaa ttaaatcgtt caccggtttc tacaagttct tctttccgta ctttatcttg
     2401 attttcaaga ttgttgatat tatcgggatt gattaaaaat tttttattaa caccaacagt
     2461 caaagatgta tcgtctttac tgtggaataa ttgcgcatta gtagagatcc cattgtcaaa
     2521 actatggctt acccctacgg ttgtatcata agtaaagtca ctgcttgttt tctcaagatt
     2581 tgtagagata ctaacatctt ttagattttt tgaataacca atagagcctg attttgtttc
     2641 tataccgtta ttcactgtag agctgctaat gttgaattca aaatcaccaa gcattgtaga
     2701 aaggttcgcc tttttgttaa ccgtcaaatc tatatttagt ttttcatcat cctctttcat
     2761 atatcctcaa aaatcaatct taagaaaatg tttttccgtg tgtttcttgt gcaattgtaa
     2821 aaatactttt attcataggt atattgccag gaatattcca gctttgattg ttttgtttgt
     2881 tttctgtttt aattcctgtc gcatctgcta tttttgtacg catattgtca tcttttatag
     2941 aatttacaaa agatttgcct tctttttttg caacaaaaat tgataaatct ttgtcgttta
     3001 atgctgctaa ccttgataaa tcgattatat cacttttctt ataatccttt tttcctgtta
     3061 aacgtctaat ttttgcttga tcgaaatttg agtcatattg aaataagtct ttaacagtta
     3121 ttgacataaa ttatcctttc tttattaggt g
//
LOCUS       DABS01000179           19922 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_6024, whole genome shotgun sequence.
ACCESSION   DABS01000179 DABS01000000
VERSION     DABS01000179.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 19922)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 19922)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19922
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            22..2253
                     /locus_tag="CPT85_08135"
     CDS             22..2253
                     /locus_tag="CPT85_08135"
                     /EC_number="5.99.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011344688.1"
                     /note="catalyzes the ATP-dependent breakage of
                     single-stranded DNA followed by passage and rejoining,
                     maintains net negative superhelicity; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase I"
                     /protein_id="DAB21233.1"
                     /translation="MVIVESPAKSKTIKKILGDSYQIEASYGHIRDFPPKVLGFDVAN
                     DFEPSFIVIPEKKVVVKKLNDLAKKSDKIYLASDPDREGEAIAWHVRQVLEVPDEKIN
                     RIEFNEITPKAIKSAVEHPRQIDMERVKAQQTRQILDRLVGYKISPVLWEKMRNYRLS
                     AGRVQSVALRMICEREDEIDAFVPVEYWSITADLLKGKLPFSAELTKYKDKKIEIKNK
                     EEADKIVADLTKKGLKYEVSKVTYRDTQRKPSAPFITSTLQREASSKLGYGVSKTMQI
                     AQKLYEGIEIGGEPVGLITYMRTDSVRISDDAQAAAKDFITDSYGENYYPKTPNNYVK
                     GKGKNVQDAHEAIRPSYIDKTPDSIKQYLTSEQYRLYKLIWSRFIASQMENAKVKNTS
                     VDITADDYLFKTGTSKVIFDGFLKVYNENDDEPDSAKIPDLEQGDELKLQKIEPKQHF
                     TQPPPRFTEASLVKALEEHGIGRPSTYAPIISKIQQKGYVEKLEKALAPTILGRTLCR
                     ELIKYFTDIMNYKFTAQMETKLDDIAEEKAVWTDVLKDFYTPFTETVDSAKKNTPKVL
                     IESDVVCPKCGKKMIVRTSRFGTQFLGCSGYPECKTMMPLNKDGSAAPVDEKSDEKCE
                     KCGSEMIVKVGPYGKYLQCTNDECKHRKRIVITTGVKCPKCAEGEIIQRKSKYGKIFY
                     GCNKYPDCDFVSWNEPVQENCPECGAYLVKKITKKESKLVCSNNTCSFSKPLESEEES
                     QNG"
     gene            2246..3097
                     /gene="aroE"
                     /locus_tag="CPT85_08140"
     CDS             2246..3097
                     /gene="aroE"
                     /locus_tag="CPT85_08140"
                     /inference="COORDINATES: protein motif:HMM:TIGR00507"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="DAB21220.1"
                     /translation="MVKFAVIGHPLTQSLSAVMHNAMLEHLGIDGSYELLDTEQEDLV
                     TRVKQLKSQGYMGFNVTIPLKVPITLFLDGCDRLADIAGCANTVKIMDDKTLYGYNTD
                     IYGFQKAIPLEIQDKLKNNTVSILGTGGAARAAAIAFCEIGVKEIDFYARNIINASNM
                     VNFLRDSFDNVTFNLKQMQSLRDLSSSKMLVNSTPVGMRGKAMGVSPIEESILKTLME
                     DAVVYDIVYNPLKTEFIKLAHKNGYKTITGLDMFVHQGAKAFELWTGQKANPDVMKMA
                     ALEELAE"
     gene            complement(3111..4436)
                     /locus_tag="CPT85_08145"
     CDS             complement(3111..4436)
                     /locus_tag="CPT85_08145"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21221.1"
                     /translation="MSFKGSAASEAAKAAKKLAHEAKLNKLKEAVRNKSVEELEKTFG
                     GKLAKNKAFNKFLDIVSSNTLIADALIALFLTAVARPASIYAIPTKDPVEKKKNNYQV
                     AHSAATGLLGLGFTMAIAEPIKRGVMKIIDEPSKYIKKGDSSYVSKNERVFRETAVRI
                     HQPLFLPIRAALTILMVKPILDALGLDKNGKGAVSPQTKAKIDYSFMSFKGTDKKAFK
                     KFSNLNVNVQKTTDSVAANTQTPSFKGAGGQVTELIAQGIGKIGETNSARKFINWFAK
                     KDNWFPHLIAGESLWLSGFYMQQTAKSKKIEKDQKLPMMLNQGITAVLCTLGAYKLDG
                     LIKDKLDVYKEVYKKMNPEMEAKSKPFADLLKKYANDKNMLKALKNDKKYETIRKAYY
                     QWDNKMMGIRLLGPVVIFTVIYRFIGPVVITPLANKLSEWIEPHNKKAA"
     gene            complement(4687..6279)
                     /locus_tag="CPT85_08150"
     CDS             complement(4687..6279)
                     /locus_tag="CPT85_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008725568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="DAB21222.1"
                     /translation="MKVLITDKINETAKNIVDEAALGVILPTMQEDELCKVIGEYDAL
                     MVRSQTKVTRKVIEAGKNLKIIGRAGVGVDNIDLEAATQNGIIVVNSPDGNTNAAAEH
                     TVALMLAMSRNIAKAAASTKQGLWERSKFTGHEVYGKTLGVIGFGKIGHHVAEAAKAM
                     GMKILVCDPYTTKEVVEKFGAKYVESLDELWPQCDYITVHVPKTKETLHMINKETISK
                     MKKGVRLINCARGGIIDEQALAEALESGHVAQAAVDVFETEPEIKDSPLVKTNGDILL
                     TPHLGASTEEAQLKVAEDVAEQIRDVLKGGSARSAVNIPSLKPEKLEPVKDYMQLAEN
                     IGELAMQISTGNLKGIYITVKGTLADLDVAPLETAVVKGILGSFLTDVNYVNAPVIAK
                     SKGLDVTTTKSNTSTDYIGSITLKLVTDKETNSVAGALIAHDMPRIVKINGYNASIEP
                     EKHMILVPHENKPAMVAKVATVLGNKNINITRMNVAQNRTQDDNISIMIINTGSEVDE
                     ATLAEISAIDGVGRAKYIRLTA"
     gene            6431..7258
                     /locus_tag="CPT85_08155"
     CDS             6431..7258
                     /locus_tag="CPT85_08155"
                     /inference="COORDINATES: protein motif:HMM:PF01476.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21223.1"
                     /translation="MSSYTIKSGDNLWNICKRQFGLTNSAEIAKKVKEVAGYNNIKNA
                     NFIKAGQEIKLFNTDNQPASAAAERIKNSDIKTFDDLNKLAESKVSIFGENTKTDKQK
                     QTAYLDYSEKLLSDYYDINKDGTVTVEEFEQVEHNGTSKTNELTQAFFAEQGGVISDS
                     EKDQMATIAQRTANLFAKNLDMNADGIISKEEFAFFNENADEVDGAKDGIIKNAGETA
                     MFKAVTGMNAGDKDINRVVNKYFNGETLTADEQKILEQSTVTIRKNMSKAAGFNVEG"
     gene            complement(7259..9100)
                     /locus_tag="CPT85_08160"
     CDS             complement(7259..9100)
                     /locus_tag="CPT85_08160"
                     /inference="COORDINATES: protein motif:HMM:PF00496.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="DAB21224.1"
                     /translation="MNKKIIYVITLLLFMALVISGCLKKDIPQKDTAQCNTESFTQQI
                     YEPYPIQTKTINGTDYLMSRSPAGKYGGTLVTSTIGEGPKTFNSWNSMDATSSQAADI
                     MFDALVSTDPYTGEVYPKMAKSIKVLPDKKTYIIELRHGLKWSDGKPITADDVYFTWN
                     TIIFGGFGNTSTRDAMYIGDELPKIEKIDKYTVKFTTPKPFSPFLRQLGVPIAPKHIL
                     EPVTKQGKRAFASFWSSNTKPSDFVTSGAFKLKEYVPAQRLVYERNPNYYMIDEKGQK
                     LPYLDKYIILIVGDLNNELLKFKSGELDTVGLRGTNVSLFKEKEKFSDYKIYNLGPDT
                     GTMYFAFNLNNRKNDKGKFYVNPIKQKWFNDINFRHAVDYALDRENMVFNIASGVAAP
                     LFTPEPLSSIYLNEQVAKGHPQDINKAKELLKKSGFTWKKGKLYDKDGNKVEFDLYTN
                     AGNTERESIGVMVKQDLEELGMTVNFKPIEFNTLVSKLVNTNDFDAVIMGFTGSPLEP
                     YGGKNVWYSNGTLHVFNMRKTPEENKKLFDWERQLNSLFDRASLELDFDKRKALYEQY
                     QQLIYDEKPIIYLYSPIRISAIRNKFGNIYPTPLGGVVHNIEEVYIK"
     gene            9159..9563
                     /locus_tag="CPT85_08165"
     CDS             9159..9563
                     /locus_tag="CPT85_08165"
                     /inference="COORDINATES: protein motif:HMM:PF03073.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TspO protein"
                     /protein_id="DAB21225.1"
                     /translation="MLNXKPADTKFYKNLNKPPFQPPAWLFAPVWTIIYILLFISLVF
                     LIKAPFHPLKPVAYILFSIQMILNVSWMPVFFKKQKICAAFAISVLLFFCIIAMIIVY
                     YPISFYASILLIPYLFWSAYASAINLYICEMN"
     assembly_gap    9169..9170
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(9560..11005)
                     /locus_tag="CPT85_08170"
     CDS             complement(9560..11005)
                     /locus_tag="CPT85_08170"
                     /inference="COORDINATES: protein motif:HMM:PF00771.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21226.1"
                     /translation="MKSTRMQYCIKAVPSDDTFQMESLLNEMSSLGWELYTMHEVEAD
                     EGYNYNCIFVKECDTAQENEDEDESIFGYQSQMQKMIQSQNEPYELCVEIQRKIKDKR
                     KKINSIKSLIDETNETQRQELNNEMYKSIEELKELKKQLQDTISPEIMLDKIGEDKIK
                     IKLSEENIELVNPDMDANLVAQTVKVRQTLVEQLGYIIPKIRFENDETLQANEFEIDV
                     RGVCAAKGVVFNGYYMFFKDDLNLDKPAKDMIKDKDPITGKTVYWVPVEKTKDFWAQG
                     YDSSQVIARILEYVCIKNVDEIFDYNDINNYIEIVSEDNLYLIENIVPDFVSIAELKY
                     ILTSLIKERVSIKDIVYIFEKINDFADXXLSRVRHSLSRQISKSIANENNLIQAFELS
                     EESLKYLSAKVAGKGTVIRIDNTKIQTIVNNIYKVIDKHNINADEIVVIVPMEIRQVT
                     SVVLSQLMPSVKVVAKEEIANGYTTEIYDRV"
     assembly_gap    9918..9921
                     /estimated_length=4
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(11168..11986)
                     /locus_tag="CPT85_08175"
     CDS             complement(11168..11986)
                     /locus_tag="CPT85_08175"
                     /inference="COORDINATES: protein motif:HMM:PF04468.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage 0 sporulation protein"
                     /protein_id="DAB21227.1"
                     /translation="MGNKMIKYAVNLIKNTFHPLQIAESAHVEHGQLVLVRTEKGEEV
                     AKVFVVNPLIAKAWESKMPESIPLIRVLGQKDLETLEELKIAEAEAFKTCKELVAQHN
                     LHMNLVQTKYTFDRRKITFYYTAPERVDFRGLLKDLTQVFKRVRIDLRHIGVRDETSL
                     LEGNGLCGRPFCCCTFLRKFDSINIKLAKDQGMPITPGKISGTCGRLLCCLNYEYKNY
                     IDAAKDMPPIGSGVMTPDGLGRVCSLHFLSNEIAVXTAKLKTLKKKKLKWLTVM"
     assembly_gap    11225..11226
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            12142..13929
                     /locus_tag="CPT85_08180"
     CDS             12142..13929
                     /locus_tag="CPT85_08180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019120096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="DAB21228.1"
                     /translation="MKTFSHMKSHYNEDLTIQDIDKEVTLSGWVSAVRDLGGIIFIEL
                     RDKTGFFQVVADPQINPDVHAVFSKLKDEYVIQVKGKISKRPPETYNAELKTGEIEMY
                     PSEVKIFSEAKLLPFDLSSDETKEDLRLKYRYLDIRRPQMTSNLKLRHDIVTAIRSYL
                     NNAQFMEVETPILINTTPEGARDYLVPSRVQEGKFYALPQSPQIFKQLLMVGGIEKYY
                     QIAKCFRDEDLRADRQPEFTQVDMEMSFATQDDVIELTEGLIVEAFKAAGVDIKPPFT
                     RISWQEAMDRFGSDKPDARFGLELFDISDIMMESTFEPVKETLKKGGVAKAIKIPGIA
                     GYSRKEMDDIRSLAISFGAKGIAWITYMEDGTVKSPILKFLTEEQIEALKVKADAKPG
                     DIVFFVADDKKTTYDVMGRFRLFFGEKLGLIDENKHALLWVVDFPMFEYSKEFDRVMA
                     MHHPFTSPNLEDVDKMKTEPMNVRSIAYDIVYNGTELGGGSVRIHSTDVQRKVFEALG
                     LTEEEVQQKFGFMLQAFQYGTPPHAGLAIGLDRLVALLTHNTSIREVIAFPKNSAAKC
                     LMTDAPTYASEEQLMELHLRSTVKREQKV"
     gene            13836..14465
                     /locus_tag="CPT85_08185"
     CDS             13836..14465
                     /locus_tag="CPT85_08185"
                     /inference="COORDINATES: protein motif:HMM:PF00293.26"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribose pyrophosphatase"
                     /protein_id="DAB21229.1"
                     /translation="MSYDRRSNICFRRAVDGIAPSLNRKKRTKSIMDKFTEKTLSSKT
                     VYKGRIFDITSDEIVLSDGLKRNREIIHHPGGVVILALKDDGNILLVKQYRYAVKSVQ
                     TELPAGRLEKGEDPLLAAQRELREETGYIAKNWESLGYIFTTFGICDEKLYLFKATGL
                     AFDKPDPDEGEILDYFELPLSDVHNLVKNGTINDAKTICALARLGLESI"
     gene            14470..15288
                     /locus_tag="CPT85_08190"
     CDS             14470..15288
                     /locus_tag="CPT85_08190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00099"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21230.1"
                     /translation="MSKIKMLVLDIDGTIFKKDYTASDRVKNTLQRLSDDGIKVVLCT
                     GRMYAATKCIAQELGLTTPVICYQGGLVKDFNNNDTTLLEDTMDVELARDVINELKKR
                     KLFFNLYINDVLMVEEDHELIRQYVDARNISYKVVGNCDNIDLTGVNKILAIYDNTTL
                     IEDLQKELAKKYEGKLYVIRSTPRFCEFSSPSATKGNAVRFLAEKWGINKEEIMACGD
                     QDNDIEMLLAAGVKVAMGNATEDLKKIADYVTETVDNDGVACAVAKFIGEKYAI"
     gene            15278..15763
                     /locus_tag="CPT85_08195"
     CDS             15278..15763
                     /locus_tag="CPT85_08195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003079838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="DAB21231.1"
                     /translation="MQFRIGQGFDLHQFAEERDLILGGVKIDHNKGLLGHSDADALCH
                     AIIDALFGALALGDIGQHFPDTDPQYYGCDSTELLAQAMYLVLKEGYKINNIDATIKT
                     QQPRLGPFIKAIQKNLADVLNLELNQVSVKAKSMEWMGPIGEGKCLAVDAVVLLEEIS
                     I"
     gene            complement(15779..16687)
                     /locus_tag="CPT85_08200"
                     /pseudo
     CDS             complement(15779..16687)
                     /locus_tag="CPT85_08200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012034241.1"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase"
     assembly_gap    16474..16529
                     /estimated_length=56
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(16693..17337)
                     /locus_tag="CPT85_08205"
     CDS             complement(16693..17337)
                     /locus_tag="CPT85_08205"
                     /inference="COORDINATES: protein motif:HMM:PF01914.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21232.1"
                     /translation="MFEHIHAFLGYFSKLFVTLDGIGLAPVFIALTANSKEKWRNIMM
                     NKAIVIAFFILLFFAYTGSVVLDLLGISLTALKIAGGILLLIMAIDLVLGNPEPAMNN
                     ENKEERKESMKRTDISVFPLAIPLLSGPATITMLTICMKNSQGDVLDRSLIIAALFFN
                     LVVCWLILKFSSKVSKILGKTGVSVINRIVGILLAAMSCEFLMNGLVEIIKSAR"
     gene            17451..>19922
                     /locus_tag="CPT85_08210"
     CDS             17451..>19922
                     /locus_tag="CPT85_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003248045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="DAB21234.1"
                     /translation="MMNDKIVIKGANQHNLRNVDLELPKNELIVFTGVSGSGKSSLAF
                     DTIFAEGQRRYVESLSTYARQFLGQMDKPDVESIDGLSPAISIDQKSTSNNPRSTVGT
                     VTEIYDYLRLLYARIGTPHCPKCGDVIKPQSIDEIVDKIMQLEEGTKIQVIAPVARGK
                     KGEFASLINDLKQEGFIRLKIDGELYNLDDTDIEDIKLEKNKKPXKHDIDVVVDRIVI
                     KDSAKSRLADSAQIALKKANGLMTVDVIGDKELIFSEKLACPKCGLSFEELAPRTFSF
                     NNPYGACPTCSGLGYDFVIDPDLVVPDRKKSIKQGAIYPWSKTTTSYYTDILQSVSDH
                     YGIDLEKPFEELKKEEQDLILYGGKEVVNFRVKQFGTHRYTTQKMKFSGVIPFLEKRY
                     NEAGGEYWREEIQKYMKMTPCKDCHGARLTPFALAVTVGGKNIFEVTXITESFKFFSD
                     LFLELNDFQMKIAKQVLEEVRARLKFLLDVGLGYLNLSRLSLTLSGGEAQRIRLATQI
                     GSGLSGVLYVLDEPSIGLHQRDNDMLIKTLLRLRNLGNTLIVVEHDEDTMKNADYIVD
                     IGPRAGVHGGKVVAKGTLDEIKQVKDSITGQYLSGAKKIPVPSKRRDGNGEFLRVKNA
                     HLNNLKNIDVDIPLGKIVALTGVSGSGKSTLMQDLIHEYAIHKLRGNKPKPIGVDEIL
                     GFEHIDKIIDIDQSPIGRTPRSNPATYTDVFTHIRDLYAMTNEAKVRGYKPGRFSFNV
                     KGGRCEACKGDGLLKIEMNFLSDVYVKCDVCKGQRYNRETLEVKYKGATIADVLNMTV
                     AEAYVFFENIPKIKSRLKTLYDVGLG"
     assembly_gap    18062..18063
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    18767..18768
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         6100 a         3586 c         3752 g         6416 t
ORIGIN      
        1 aaaactaaaa aagaaaaggc gctggtaatc gttgagtctc ccgcaaaatc taaaaccatt
       61 aaaaagattc tcggggattc gtatcaaata gaggccagct acgggcatat cagagatttt
      121 cctcctaaag tgctcggttt tgatgtggct aatgattttg agccttcttt tatagtcata
      181 cccgaaaaaa aagttgttgt taaaaagcta aacgatctgg ctaaaaaatc agacaaaatt
      241 tacctggcgt ccgaccccga ccgtgaggga gaagccattg catggcatgt cagacaggtg
      301 ctcgaagtcc ctgatgagaa gattaaccgt atagaattta atgaaatcac tccaaaagct
      361 attaaaagtg cggttgagca ccctcgccag attgatatgg aacgtgttaa agcacaacag
      421 acaagacaaa tactagaccg ccttgttggt tataaaatca gtcctgtatt gtgggaaaaa
      481 atgagaaatt acagactttc agcaggccgt gtgcaaagtg ttgcacttcg catgatttgt
      541 gaaagagaag atgaaattga tgcatttgtt cctgttgaat actggtcaat tacagctgac
      601 cttttaaaag gcaaattgcc attcagtgct gaacttacaa agtataaaga caaaaaaatt
      661 gaaataaaaa acaaagaaga agcagacaag attgttgcag accttacaaa aaaaggtctt
      721 aaatacgaag tatcaaaagt tacttaccgc gatacccaga gaaaaccctc tgctcctttt
      781 attacgtcta cattgcagcg tgaagcaagc agcaagctgg gatatggcgt atcaaaaaca
      841 atgcagatag cgcaaaaact gtacgaaggt attgaaatag gcggtgaacc tgtcggtttg
      901 attacctata tgagaacaga ttctgtgaga atttcagatg atgctcaagc tgcagcaaag
      961 gactttatta cagacagcta tggcgaaaat tattacccca aaactcctaa caactatgtt
     1021 aagggcaaag gcaaaaacgt acaggatgct cacgaagcta tcagaccttc ttatattgac
     1081 aaaactcctg acagcataaa acagtatttg acatcagaac aatacagact ttataaactt
     1141 atctggtcta gatttattgc ttctcaaatg gaaaacgcca aagttaaaaa tacatccgtt
     1201 gatatcactg cagatgatta tttgtttaag acaggtacaa gcaaagttat ttttgacggg
     1261 ttcttaaagg tttataatga aaacgatgat gaaccggatt ctgctaaaat ccctgattta
     1321 gaacagggcg atgagctgaa acttcaaaaa attgaaccta aacaacattt tacacagcct
     1381 ccgccaaggt ttacggaagc atctcttgtt aaagctcttg aagaacatgg aatcggccgt
     1441 ccatctactt atgctccgat tatttcaaaa atccagcaaa aaggctatgt agaaaaactg
     1501 gaaaaggctc ttgctccgac catactgggc cgtactcttt gtagagaact tataaaatat
     1561 tttacggata taatgaatta taaattcact gcacagatgg aaacaaagct tgatgatatt
     1621 gcagaggaaa aggctgtctg gacagatgta ttgaaagatt tttatacacc gtttaccgag
     1681 accgttgatt ctgctaaaaa gaacacgcca aaggttctta tagagtctga tgttgtatgc
     1741 ccaaaatgcg gtaaaaaaat gattgtaaga acaagccgct ttggtacaca gtttcttggc
     1801 tgttcaggtt atcccgaatg caaaacaatg atgccgctaa ataaagacgg ttcggctgct
     1861 ccggttgatg aaaaaagcga tgaaaaatgc gaaaaatgcg gctctgaaat gattgtaaaa
     1921 gtcggcccct acggaaaata tctgcaatgt accaacgacg aatgcaaaca tagaaaaaga
     1981 atcgttataa caacaggtgt aaaatgtcct aaatgcgcag agggcgaaat tatacagcgt
     2041 aaatccaagt acggcaaaat cttttatggc tgtaacaaat atcctgactg tgattttgtt
     2101 tcgtggaatg aacctgtgca ggaaaattgt ccggaatgcg gcgcgtatct tgttaaaaag
     2161 attacaaaaa aagagtcaaa acttgtttgc tcaaataata catgctcttt ttccaaacct
     2221 ttagaatctg aagaggaatc tcaaaatggt taaatttgct gttattggcc atcctttgac
     2281 gcagtctttg tcagctgtta tgcacaatgc aatgttggag cacctcggta ttgacgggtc
     2341 atacgagctt ttagatacag aacaggaaga ccttgtaaca agggtaaaac agctaaaatc
     2401 acagggatat atgggcttta atgtcacaat ccctttaaaa gtgccaataa ctctgttttt
     2461 agacggttgt gacagactgg ctgatattgc cggttgtgca aatactgtta aaataatgga
     2521 tgacaaaact ctgtacggct acaataccga tatttacgga ttccaaaagg caatacctct
     2581 tgaaattcag gataaattga aaaataacac ggtttctatt cttggtacag gcggtgctgc
     2641 cagagctgcg gcaattgctt tttgtgaaat cggtgtaaaa gagattgatt tttacgcaag
     2701 aaatataatc aatgcaagca acatggttaa ttttttgcgt gacagctttg ataacgtaac
     2761 ttttaacctc aaacaaatgc aaagcttaag agacctttcc tcttcaaaaa tgcttgttaa
     2821 ctctactcct gtaggcatga ggggtaaagc aatgggcgtt agccctattg aggaaagtat
     2881 actaaaaaca ctgatggaag atgctgttgt ttatgatatt gtatacaacc ctctcaagac
     2941 agagtttata aaactcgccc ataaaaacgg ttacaagaca ataacaggtc ttgatatgtt
     3001 tgtgcatcaa ggtgcaaagg cttttgaact ttggacaggc caaaaggcaa accctgatgt
     3061 tatgaaaatg gctgctctgg aagaattagc tgaataaata tatttgcaaa ctaagctgct
     3121 tttttattgt gaggctcaat ccactcgctt aatttgtttg caagaggtgt aataacaaca
     3181 ggaccgataa atctgtagat aacagtgaag attacaacag gtccgagtaa tctgataccc
     3241 atcattttgt tatcccattg atagtaagct tttctgattg tttcatattt tttgtcgttt
     3301 ttcagagctt ttagcatatt cttatcattt gcatattttt tcaataagtc agcaaatggt
     3361 tttgattttg cttccatttc aggattcatt tttttgtaaa cttctttata tacatcaagt
     3421 ttatctttga taagaccatc aagtttgtaa gcgcctaatg tacaaaggac agctgttata
     3481 ccctgattga gcatcattgg aagcttttga tctttttcaa ttttcttgga ttttgcagtt
     3541 tgctgcatat aaaaacctga aagccataaa ctttctccgg caatcaaatg cgggaaccag
     3601 ttgtcttttt tagcaaacca attgatgaat tttcttgctg aattagtttc tccgattttg
     3661 ccgattcctt gagcgataag ttcagtaacc tgaccgcctg cgcctttaaa tgaaggtgtc
     3721 tgtgtgtttg ctgcaacaga atctgttgtt ttctgtacgt ttacatttaa gtttgagaac
     3781 tttttaaatg cttttttatc tgtaccttta aaactcataa atgagtagtc gattttagct
     3841 tttgtctggg gagaaactgc gccttttccg tttttatcca agccgagagc atccaaaata
     3901 ggcttaacca tcaaaatagt taatgctgct ctgataggaa ggaacagcgg ctgatggata
     3961 cgtactgctg tttctctgaa tactctttcg tttttagaaa catatgatga atcccctttt
     4021 tttatgtatt tagaaggttc atcaataatt ttcattacac cgcgtttgat aggttctgca
     4081 attgccattg taaatcctag acccaataaa cctgttgccg cagagtgtgc aacctgatag
     4141 ttatttttct ttttctcaac agggtctttt gtcggtattg cataaataga cgcaggtctt
     4201 gcaacagctg ttaagaataa agcaatcaat gcgtctgcaa taagtgtgtt gctggaaaca
     4261 atatctaaaa atttgttaaa ggctttgttt ttagccagtt ttccgccaaa tgttttttct
     4321 aattcttcaa cagatttatt tcttacggct tcttttaatt tattgagctt tgcttcgtgt
     4381 gcaagctttt tagcagcttt tgcggcttcg gaagcagcac tgcctttaaa actcaaacga
     4441 ccgctcggat ttactcctgc ggtcgtttga ttcgcatttc ttttgttatt atttttcgtc
     4501 aaataatgtt tctgatgaat attatatact agattttcgg ttttcattgg ttttccaatc
     4561 tacttagcta ttccgtattt gatttaagtt tataaatttt attatttgct aaatatacat
     4621 caaaagtaac aaaaaagtaa agttttttta caattcttaa tcaagtgtaa aaaatacaat
     4681 taaagattaa gctgttaacc ttatatattt tgctctgcca acaccgtcta tagctgatat
     4741 ttcagccagt gttgcttcat cgacttcgct gcctgtgttg attatcatta tagaaatgtt
     4801 gtcatcctga gtgcgatttt gtgcaacgtt catccttgtt atgtttatgt ttttgttgcc
     4861 aagtactgtt gcgacttttg caaccattgc aggtttgttt tcgtgcggaa caagtatcat
     4921 gtgtttttct ggttctatgc tggcgttgta gccgtttatt ttaacaattc ttggcatgtc
     4981 gtgtgctatt aatgcaccag ctacggaatt tgtttctttg tcggtcacca gtttaagagt
     5041 gatagagcct atataatcag ttgaagtatt tgattttgtt gttgtaacat caagcccctt
     5101 gctctttgct atgaccggtg catttacata gtttacatcc gtgagaaaag atcccaaaat
     5161 acctttaaca acagccgttt caagaggtgc aacatccaaa tctgcaagtg ttccttttac
     5221 tgttatgtaa attcccttca ggtttcctgt agaaatttgc atagcaagtt ctccaatatt
     5281 ttcagcaagc tgcatatagt ctttgacggg ctcaagtttt tcgggtttta gtgatggtat
     5341 gttaactgct gaacgagcag agccgccttt taatacatct cttatttgtt ctgctacatc
     5401 ttctgcaact tttaattgag cttcttctgt gcttgcaccg agatgcggtg tcaaaagaat
     5461 gtcaccgttg gttttgacaa gaggtgaatc tttaatttca ggttctgttt caaacacgtc
     5521 aaccgcggcc tgtgcaacat gacctgactc caaagcttct gcaagagcct gttcatcaat
     5581 aataccgcct cttgcacagt ttataagacg tacacctttt ttcatttttg atattgtttc
     5641 tttgttaatc atatgcagtg tttctttggt ttttggtacg tgcactgtta tataatcgca
     5701 ttgcggccag agttcgtcta aggattccac atattttgca ccaaattttt ctacaacttc
     5761 ttttgttgtg taggggtcac aaaccagaat tttcataccc atagcttttg ctgcttctgc
     5821 aacgtgatga ccaattttgc cgaatcctat tactccaaga gtttttccat acacttcatg
     5881 gcctgtaaat ttggaacgtt cccacagacc ctgctttgtt gaagctgctg ctttagcaat
     5941 gtttcttgac atggcgagca tcaatgctac agtgtgttcg gcagctgcgt ttgtgtttcc
     6001 gtcaggagaa tttactacga taatcccgtt ttgtgtagct gcttcaaggt ctatgttatc
     6061 tacaccaaca cctgctctgc ctataatttt aagatttttg cctgcttcta taacttttct
     6121 tgttactttt gtctggcttc ttaccatcag ggcatcgtat tcgccaataa ccttgcataa
     6181 ctcatcttcc tgcattgttg gaaggattac acccagtgct gcttcatcaa caatattttt
     6241 tgcagtttca ttaattttat ctgtaattaa tactttcatt acactaaact ccttctaata
     6301 acgattattt tcccgattat ataacatttt ttttacaatt aacagaaatt aacaaatttt
     6361 taggcaattt tttttaacaa aatgttttta tatatacaga gtatataact taattaagag
     6421 agagtaaatt atgagcagtt acacaatcaa atcaggtgac aacctttgga acatttgtaa
     6481 acgccaattt ggtcttacta attcagcaga aattgcgaaa aaagtaaaag aagttgctgg
     6541 ctataacaac ataaaaaatg caaattttat taaagccgga caggaaatca aactgtttaa
     6601 tacagataat caaccggcat cagccgcagc tgaacgaatt aaaaacagcg atataaaaac
     6661 ttttgatgat ttaaataaac ttgcagaatc aaaggtatcg atttttggcg aaaacacaaa
     6721 aacagataaa caaaagcaga cagcttatct tgattattca gagaaacttt tgtctgatta
     6781 ctatgatata aacaaagatg gaacagttac tgttgaagaa tttgaacagg ttgaacacaa
     6841 cggtactagc aaaactaatg aattgacaca agcatttttt gcagagcaag gcggcgtaat
     6901 ttcggattct gaaaaagatc aaatggcaac tattgcgcaa cgtactgcaa atctgtttgc
     6961 aaaaaatctt gatatgaatg cagacggcat aataagtaaa gaagaatttg catttttcaa
     7021 cgagaatgct gatgaagtag acggagcaaa agatggaatt atcaaaaatg ccggtgaaac
     7081 tgctatgttt aaagctgtta caggaatgaa tgccggcgat aaagatataa acagagttgt
     7141 aaataaatac ttcaacggcg aaacactgac tgctgatgag caaaaaattc ttgaacagtc
     7201 aacagttaca ataagaaaaa acatgagcaa agctgccggt tttaacgtag aaggctaatt
     7261 attttatata aacttcttca atgttatgca caactccgcc tagcggtgtt ggataaatat
     7321 ttccaaattt atttcttata gcagagattc ttatcggtga atatagatag attattggct
     7381 tttcatcata tataagctgc tggtattgct cataaagagc ctttcttttg tcaaaatcaa
     7441 gctctagtga cgctctgtca aaaagtgaat tcaactgtct ttcccagtca aaaagctttt
     7501 tattttcttc tggcgttttt ctcatattga acacatgcaa tgttccgtta gagtaccaga
     7561 cgtttttgcc gccgtaaggc tcgagcgggc tgcctgtaaa gcccataatt acagcatcaa
     7621 aatcattggt atttacaagt ttgctcacca gtgtgttaaa ttcaatcggc ttaaagttaa
     7681 cagtcatgcc aagctcttcc aggtcttgtt ttaccataac accgatagat tctctttccg
     7741 tgtttccggc attggtgtaa aggtcaaatt ctactttgtt gccgtcttta tcgtatagtt
     7801 tccctttttt ccaggtaaag ccggattttt tcaagagctc ttttgcttta ttaatatcct
     7861 gcgggtgacc ttttgcaacc tgttcattaa ggtaaataga agataatggc tccggtgtga
     7921 acaatggtgc tgcaacaccg cttgctatat taaacaccat attttctcta tcaagagcat
     7981 agtctacagc atgtctgaaa ttgatatcat taaaccattt ttgtttaata gggtttacat
     8041 aaaacttgcc tttgtcgttt ttgcggttgt tgagattaaa cgcaaagtac attgtacctg
     8101 tgtcaggccc gaggttgtat attttataat ctgaaaattt ctctttttct ttaaacagtg
     8161 atacattcgt gcccctaagg ccgactgtat ccagttctcc tgatttaaac tttaacagtt
     8221 cgttgtttaa atcacctact atcaaaataa tatatttgtc taaataaggc agcttctgcc
     8281 ctttttcgtc tatcatgtag tagtttggat ttctttcgta aaccagtctt tgcgcaggaa
     8341 catattcctt gagtttgaat gctccgctgg ttacaaaatc cgagggtttt gtattagagc
     8401 tccagaatga tgcaaatgct cttttcccct gttttgtaac aggttcaagt atatgtttgg
     8461 gggcaattgg cactcctaac tgtcttaaaa aaggtgaaaa aggttttgga gtagtaaatt
     8521 ttacagtata tttatcaatt ttttcaattt ttggcaattc atcgccaata tacattgcgt
     8581 ctcgtgtact tgtgttgccg aagcctccaa agataattgt gttccaggta aagtacacgt
     8641 catctgctgt gataggtttt ccgtctgacc acttcagtcc gtgcctgagc tctataatat
     8701 aagttttttt atcaggcagc acttttatac tttttgccat tttagggtaa acttcaccgg
     8761 tataagggtc agtagaaaca agagcatcaa acatgatatc agcagcctgt gaggatgtag
     8821 cgtccattga attccagctg ttaaaagttt ttgggccttc tcctattgta cttgttacga
     8881 gtgtcccccc gtattttcca gcaggactgc gcgacataag gtagtctgta ccgttaattg
     8941 tttttgtctg gataggatac ggctcatata tttgctgggt aaaagattct gtattacatt
     9001 gagcggtatc tttttggggg atatcttttt tcaggcagcc ggatattacc agtgccataa
     9061 acaacaaaag agttattaca taaattattt ttttattcat acattaaatt tagcacaaat
     9121 ttttgtttta ttaacactgc ccgcatgcgg gataaaatgt gctaaatann aagcctgctg
     9181 atacaaaatt ttataaaaat ttgaacaaac cgccgtttca acctccggca tggctgtttg
     9241 ctccggtgtg gacaattatt tatattcttt tgtttatttc attagttttt ttgataaagg
     9301 ctccttttca tccgctaaaa ccggttgcgt atattctctt ttccatacag atgattttga
     9361 atgtgtcatg gatgcctgtg ttttttaaaa agcaaaagat atgcgcggct tttgcaataa
     9421 gtgttttgtt gtttttctgc ataattgcaa tgataattgt ttattatcca atatcttttt
     9481 acgcgtcgat tctgctgata ccgtatcttt tctggtcagc atatgcatct gcaataaatt
     9541 tgtatatttg cgaaatgaat taaaccctgt cgtaaatctc tgttgtgtat ccatttgcaa
     9601 tttcttcttt tgcaactacc tttacacttg gcataagctg cgataacaca acacttgtta
     9661 cctgtcgtat ttccattggc acaattacaa caatctcatc tgcattaata ttatgtttat
     9721 caattacttt ataaatgttg tttacgattg tttgaatttt tgtattgtct atcctgatga
     9781 cagtaccttt gccggcaact tttgcgctca ggtattttaa agactcttct gacagttcaa
     9841 acgcctgtat aagattgttt tcgttagcaa tactttttga tatttggcgc gaaagcgaat
     9901 gtcttactct gcttaagnnn ncatctgcaa agtcgttaat tttttcaaat atataaacaa
     9961 tatcttttat agaaacacgt tcttttataa ggcttgttaa aatatatttc aattctgcaa
    10021 ttgaaacaaa atcaggtact atattttcta tcaagtaaag attatcttca cttactattt
    10081 caatgtaatt gtttatatcg ttgtaatcaa atatctcatc aacatttttt atacaaacat
    10141 actccaggat acgggcaata acctgagatg agtcatagcc ctgtgcccag aagtcttttg
    10201 ttttttcaac aggcacccag tatacggttt ttccagtgat agggtctttg tctttaatca
    10261 tgtcttttgc aggcttatca aggttgaggt cgtctttaaa gaacatatag tatccgttaa
    10321 agacaacgcc ttttgctgca caaacacctc ttacatcaat ttcaaactcg ttggcttgca
    10381 aagtttcgtc attttcaaat ctgattttgg gtattatata accgagctgt tcaacaagag
    10441 tttgtcttac ctttactgtt tgtgccacaa gatttgcatc catatccggg ttaacaagct
    10501 ctatattttc ttcactcaat ttaattttta ttttgtcttc gccgattttg tccagcataa
    10561 tctccggcga aattgtatct tgaagttgtt ttttcaactc ttttagctct tcaattgatt
    10621 tgtacatttc attgttgagc tcttgtcttt gagtttcatt tgtttcatca atgagtgatt
    10681 ttatgctgtt tatttttttt cttttgtctt taatttttct ctgtatttct acacatagct
    10741 cgtatggttc gttttgagac tggatcattt tttgcatctg tgattgatag ccgaaaatgc
    10801 tttcgtcttc atcttcgttc tcctgagctg tatcacactc ttttacaaaa atgcaattat
    10861 agttataacc ttcatctgct tcaacttcat gcattgtata aagctcccag ccaagagaag
    10921 acatctcatt taaaagagat tccatctgaa aagtatcgtc actgggcact gctttgatgc
    10981 agtattgcat tctcgttgat ttcataattc tataattccc cgtttttaat tatttattca
    11041 gttatatcaa aaatccgcta tacattgcct gttgagctgt ttctgtcgtc ttcaagctgt
    11101 tttatatcaa cattgtaatc agactgttct tgataaacag tagtatcttg aatgtctatt
    11161 tcaatattta catcaccgtc aaccatttca atttcttctt ttttaaagtt tttaattttg
    11221 ccgtnncaac tgcaatttca ttgcttaaga aatgaagtga gcaaactctg ccaaggccgt
    11281 ccggagtcat aacgccggaa ccgattggag gcatgtcttt agctgcgtca atgtagtttt
    11341 tgtattcata gttaaggcag cacaaaagtc ttccgcaggt accggagatt ttgccgggag
    11401 taataggcat tccctgatct tttgcaagct taatattgat tgagtcaaat tttctcaaaa
    11461 acgtacagca gcaaaatggt ctgccgcaca gtccgttgcc ttcaagcaat gaggtctcgt
    11521 ctcttactcc aatatgtcta aggtcaattc ttacccgttt aaaaacctgg gtaaggtctt
    11581 ttaacagccc tctaaaatca acacgctcgg gtgctgtgta ataaaatgta attttacgtc
    11641 tgtcaaaagt gtattttgtc tgtacaagat tcatgtgcag attgtgttga gctacgagct
    11701 ctttgcaggt tttaaaagct tctgcttcag ctatttttaa ttcttcaagg gtttctaaat
    11761 ccttttgtcc cagcactctt ataagcggaa tggattccgg catttttgat tcccatgctt
    11821 ttgcaataag agggtttaca acaaaaacct ttgcaacttc ttcgcctttt tctgttctta
    11881 caagaacaag ctggccgtgc tcaacatgag cagattcggc aatttgtaaa gggtgaaaag
    11941 tattcttaat taaattaaca gcgtatttta tcattttgtt tcccataatg ttttactcgc
    12001 attttaccat aaaattgatt ttttttataa ggcttcaata ccttgagaga atataaaatt
    12061 gattctgtgc tttgtttgtt ataaatttgt tgtacgaaac actaataaaa catttaatat
    12121 taaaggatag ggaattataa aatgaaaaca ttttcgcaca tgaaatcaca ctataacgaa
    12181 gatttgacaa tacaagatat tgataaagaa gtaactttat caggctgggt ttcagctgta
    12241 cgtgacctcg gcggtattat ctttattgaa ttgagagata aaacaggatt ttttcaagtc
    12301 gttgcagacc ctcaaatcaa tcctgatgtt cacgcagtgt tttcaaaatt aaaagatgaa
    12361 tatgttattc aggttaaagg caaaatctca aaaagacccc ctgaaactta taacgcagaa
    12421 ttaaaaactg gcgaaattga aatgtatcct tctgaagtta aaatcttttc agaagctaaa
    12481 ttgctcccgt ttgatctttc ttctgatgaa acaaaagaag acttgcgctt aaaatacaga
    12541 tatcttgaca tccgccgtcc tcaaatgact tcaaacctca aattgagaca tgatattgtt
    12601 actgctatca gaagttatct taacaacgca cagtttatgg aagttgaaac acctatcctt
    12661 attaatacaa ctcccgaagg tgcaagagac tacctcgtac cgagccgtgt tcaggaaggt
    12721 aaattctatg ctcttcctca atcaccacaa atctttaagc agttgttgat ggttggcggt
    12781 attgaaaaat attatcaaat tgcaaaatgc ttccgtgacg aagacttgag agctgacaga
    12841 cagcccgagt ttacacaggt ggatatggaa atgtcttttg ctactcaaga cgatgttatt
    12901 gagttgacag aaggcttgat tgtagaagca tttaaagcag caggggtaga tatcaaacct
    12961 cctttcacaa gaatcagctg gcaagaagca atggacagat tcggctctga caaacctgat
    13021 gcacgttttg gcctagagtt gtttgatatc tctgacatta tgatggaatc aacatttgag
    13081 cctgttaaag aaaccttgaa aaaaggcggt gttgcaaaag ctattaaaat ccccggcatt
    13141 gcaggatact caagaaaaga aatggacgat atccgttcac tggctatttc tttcggtgca
    13201 aaaggtattg cctggattac atacatggaa gacggcacag taaaatcacc gattttgaaa
    13261 ttcttaacag aagaacaaat cgaagcattg aaggttaaag ctgatgcgaa acccggtgac
    13321 atcgtattct ttgtagctga tgacaagaaa acaacttatg atgttatggg cagattcaga
    13381 ttattcttcg gcgaaaaact cggacttatt gacgaaaata aacacgcgct tttgtgggtt
    13441 gttgacttcc cgatgtttga atacagcaaa gaatttgaca gagtaatggc tatgcaccat
    13501 ccgttcacat ctcctaacct tgaagatgtt gataagatga aaacagaacc tatgaatgtt
    13561 cgctcaattg cttatgacat agtttataac ggaacagagc ttggcggcgg ttctgtgaga
    13621 atccactcta cagatgtaca aagaaaagtg tttgaagcgc tcggattgac agaagaagaa
    13681 gttcaacaaa aatttggatt tatgctgcag gctttccaat atggaacgcc tccgcatgca
    13741 ggtcttgcaa tcggtttgga cagattggtt gcattattga cacacaacac ttctatcaga
    13801 gaggttattg cattcccgaa aaactctgct gctaaatgtc ttatgacaga cgctccaaca
    13861 tatgcttcag aagagcagtt gatggaattg caccttcgct caaccgtaaa aagagaacaa
    13921 aaagtataat ggataaattc acagaaaaaa ctttatcatc aaaaaccgtc tataaaggac
    13981 ggatttttga tattacgagc gacgaaatcg ttttgtctga cggacttaaa agaaatagag
    14041 aaattattca tcatccgggc ggtgttgtga tacttgcttt aaaagatgac ggtaatatcc
    14101 tgcttgtaaa acaatacaga tatgcagtaa aatccgtgca gacagagctt ccagccggtc
    14161 gtctggaaaa gggagaagac cctcttcttg cagctcaaag agaattgaga gaagaaacag
    14221 gatatattgc taaaaattgg gagtcgttgg gttatatctt tacaaccttc ggaatttgcg
    14281 atgaaaagct ctatcttttt aaagcaacag gtctggcatt tgacaagcct gaccctgatg
    14341 agggtgaaat tttggactat tttgaacttc cgttaagcga tgtgcacaat cttgtaaaaa
    14401 atggtacaat taatgacgca aagacaattt gtgctttagc aagattagga ttagaaagca
    14461 tttaaccgga tgtcaaaaat taaaatgctc gttcttgata ttgatggaac gatattcaaa
    14521 aaagattata cggcttcaga cagggtaaaa aataccctgc aaagactttc tgatgacggc
    14581 ataaaagttg ttctttgcac aggtagaatg tatgctgcca caaagtgcat tgctcaggag
    14641 cttgggctta caacaccggt tatttgctat cagggtggac ttgttaaaga ttttaataac
    14701 aatgatacaa ctcttcttga agacaccatg gatgttgagc ttgcacgtga tgtaatcaat
    14761 gagcttaaaa aacgaaaatt attttttaac ctttacatca acgatgtttt aatggtggag
    14821 gaagaccacg aacttattcg ccagtatgtg gacgcaagaa acatatctta taaagttgtt
    14881 ggaaattgtg acaatattga cttaaccggc gttaataaga ttcttgcaat ttatgataat
    14941 acaactttga tagaggattt gcaaaaagaa ctggcaaaaa aatatgaagg aaagctttat
    15001 gttatacgtt caacgccaag attctgtgag ttttccagcc cttctgccac aaaaggaaat
    15061 gcagtgcgct tccttgctga aaaatggggt atcaataaag aagaaataat ggcctgtggt
    15121 gaccaggata atgatataga aatgctcctt gcagcaggtg taaaggttgc aatgggtaat
    15181 gcaacagaag atttgaaaaa aatagcggat tatgtgacgg aaacagtgga caacgatgga
    15241 gttgcctgtg ctgttgcaaa gtttataggg gaaaaatatg caatttagaa taggacaagg
    15301 atttgactta caccagtttg cagaagaaag agatttgata ctcggagggg tgaaaattga
    15361 ccataacaag ggacttttag gacactctga tgctgatgca ttgtgccatg cgattataga
    15421 tgctttgttc ggagcacttg ctcttggtga tataggtcag cactttcctg atacagaccc
    15481 tcaatattat ggttgtgata gtacagagct gcttgctcaa gcaatgtatc ttgtattaaa
    15541 agaaggttat aaaatcaaca acattgatgc aacaattaaa acccagcagc cgagattggg
    15601 gccttttata aaagctattc aaaagaatct tgctgatgtt ttaaatcttg agctcaatca
    15661 ggtatcagtc aaagcaaaat ccatggaatg gatgggacca attggtgaag gtaaatgcct
    15721 tgctgttgat gcggttgttc tgttagaaga aataagtatt taactactta tttcttaatt
    15781 aaccgttgat ttttatcata cggtcaattg tgctgacagc ttttttagct atttgagcat
    15841 caacattaat ttcattttct tctgtttcca gaacatgaag aatatcttca agtgtgttcc
    15901 atttcatgtt gggacaaatt gcttttttgc ttacgagaat aaactctttt tcagggcaat
    15961 cacgtttgag tctgtctact acaccctgct ctgttacgat aataaactct tttttatcgg
    16021 ctttttttgc ttcatttata atagctgttg ttgatcccac aaaatctgca agttttgtga
    16081 cctctctgtg gcattcggga tgagccagca ccattgcctg cggatatact tttttctttt
    16141 caattatgtc ctcaggttta attcttaaat gagttgggca atatccggga tatgtgataa
    16201 cattaacatc cggcagcata gctgcaacat gtgttccaag atatgtatca ggagcaaaca
    16261 acacttcctt gacccctaaa gaacgtacta cattgacagc atttgcactt gtgcagcaga
    16321 tgtcgcattc tgattttact tctgcagtgg aatttacata gcacacaaca ggaatatctg
    16381 gatttttagc tttaaattct cttaattgct gtaaattaat catatcagcc ataagacagc
    16441 ctgaattcat atttgggagt aagacttttt tgtnnnnnnn nnnnnnnnnn nnnnnnnnnn
    16501 nnnnnnnnnn nnnnnnnnnn nnnnnnnnng catcggtttt agccgcctgc tggcttagat
    16561 acaatgaatc gcctgtaaaa tcagctactt cgtcaatttc tacattctgg tacgtatggg
    16621 cgagtattat tgcatttttt tcttttttta atgtattaat tttttctatt aattcttttt
    16681 gttccatttt aattacctgg cacttttaat aatctcaact aaaccgttca taaggaattc
    16741 acaagacatt gctgcaagta aaattccgac aattctgttt ataacactca cacctgtttt
    16801 gcctaaaatt ttactgactt ttgaagagaa ttttaaaatc agccagcaca ctacaaggtt
    16861 gaaaaataat gccgcaataa ttaaagaacg gtcaagtaca tcgccttgag agtttttcat
    16921 gcatattgta agcatagtaa ttgttgcagg tcctgataaa agaggtattg caagagggaa
    16981 aacagatata tctgttcttt tcattgattc tttacgttct tctttatttt cgttattcat
    17041 tgccggttca ggattgccaa gaacaaggtc aattgccata atcaataaca aaataccgcc
    17101 tgcaatcttt aacgcagtaa ggcttatacc aagcaaatca agtacgacag aacctgtata
    17161 tgcaaaaaat aaaagaataa aaaatgctat aacaatggct ttgttcatca ttatattacg
    17221 ccatttttct ttggaatttg ctgttaatgc aataaataca ggcgccaagc ctatcccgtc
    17281 cagtgttaca aatagctttg aaaaatatcc taaaaatgcg tgtatgtgtt caaacataaa
    17341 aacctttcac tttatatgag tgtttatggg tgtttatatt atacaagaaa cataaattga
    17401 ataacaaacc gtcttgtgga ataatatttt cagggttaaa tagagataaa attatgaatg
    17461 ataaaattgt tattaaaggt gcaaatcagc ataacttaag aaatgtagat ttagaactgc
    17521 caaaaaatga attgattgtt tttacgggag tatccggctc gggtaaaagc tcgttggctt
    17581 ttgacacaat ttttgcagaa ggacaaagac gctatgtaga gagcttgtct acttatgcac
    17641 gtcaatttct cggccagatg gataaacctg atgtagaaag tatagacgga ctttctccgg
    17701 ctatttcgat tgaccaaaaa tccacctcta acaacccgcg ttctactgtc gggaccgtaa
    17761 cggaaattta tgattacctg cgtcttttat acgctcgtat aggcacaccg cattgtccaa
    17821 agtgcggcga tgtaataaaa ccgcaatcca ttgatgaaat tgttgataaa attatgcagc
    17881 tggaggaagg cacaaaaatc caggttattg cccctgttgc cagaggaaaa aaaggcgaat
    17941 ttgcatctct tattaatgat ttaaaacagg aaggattcat ccgcttaaaa atagatggag
    18001 agctatacaa tcttgatgat acagacattg aagatataaa gcttgaaaaa aacaaaaaac
    18061 cnnaaaaaca cgacattgac gttgttgtgg acagaattgt tattaaagat tctgcaaaat
    18121 caagacttgc tgatagtgct caaattgcgc taaaaaaagc taacggcttg atgactgttg
    18181 atgtaatagg tgataaagaa ttaatttttt ctgaaaaact tgcttgccct aaatgcggtt
    18241 tgagctttga agagctagct cctcgtacat ttagttttaa caatccatat ggtgcctgtc
    18301 ctacatgttc gggtctcggg tatgactttg ttattgatcc cgatcttgtt gtaccggata
    18361 gaaaaaagtc tatcaaacaa ggggcaattt atccatggag taaaactact acgtcttatt
    18421 acacggatat cttgcaatca gtatcagatc attacggtat agacctggaa aaaccttttg
    18481 aagaactaaa aaaagaagaa caggatttga ttttatacgg tggaaaagag gttgtaaact
    18541 tccgcgtaaa acagtttggt acacatcgct acactactca aaagatgaaa ttctcgggtg
    18601 ttattccttt tcttgaaaaa agatataacg aagcaggcgg tgaatactgg cgagaagaaa
    18661 ttcaaaaata tatgaaaatg accccctgca aggattgtca cggtgcaagg ctcactcctt
    18721 ttgctcttgc tgttaccgta ggaggcaaaa atatttttga agttacnnct ataacagaaa
    18781 gttttaaatt cttttctgac ctgtttcttg agctcaatga ttttcaaatg aaaatagcaa
    18841 aacaggtact ggaagaagtc cgtgcccgtt taaaattttt actggatgtt gggcttgggt
    18901 atcttaattt aagcaggcta tctttgactc tttccggagg agaggcgcag cgtattaggc
    18961 ttgcaacgca aataggcagc ggtctttccg gtgtattata tgttcttgat gagccttcaa
    19021 tagggcttca ccagcgagac aatgatatgt tgattaaaac acttttgcgt ttgcgtaacc
    19081 ttggcaatac ccttattgtt gttgaacacg acgaagatac aatgaaaaat gcggattaca
    19141 ttgttgatat cggcccaaga gccggtgtgc acggaggtaa agttgttgca aaaggtacac
    19201 tggatgaaat caaacaggtc aaagattcta tcaccggtca atatttaagc ggtgctaaaa
    19261 aaattccggt tccatctaaa agacgtgatg gcaatggcga atttttaaga gtaaaaaatg
    19321 ctcatcttaa caaccttaaa aatatcgatg ttgatattcc tttaggaaaa atcgttgcct
    19381 tgaccggtgt atccggatca ggaaaatcta cattaatgca ggatttgata catgaatatg
    19441 caattcacaa acttagaggc aataaaccta aaccaatagg tgttgatgaa attttaggat
    19501 ttgaacatat tgacaaaatt attgatattg accaatcacc aataggtaga acaccccgtt
    19561 ccaaccctgc aacttatact gatgtcttta ctcacatcag agacttgtat gctatgacaa
    19621 atgaagcaaa agtaagaggc tacaaacctg gccggttcag tttcaatgta aaaggcggaa
    19681 ggtgcgaggc ctgtaaaggt gacggtttgc tcaaaattga gatgaacttt ttgtcggatg
    19741 tttatgtaaa atgcgatgtt tgtaaaggtc agcgctacaa cagagaaact ctagaagtaa
    19801 aatataaagg tgcaacaata gccgatgtcc taaatatgac tgttgccgaa gcttatgtat
    19861 tctttgaaaa tattcctaag ataaaaagcc gcttaaaaac attgtatgat gtaggtcttg
    19921 gt
//
LOCUS       DABS01000180            5526 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9204, whole genome shotgun sequence.
ACCESSION   DABS01000180 DABS01000000
VERSION     DABS01000180.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5526)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5526)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5526
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            55..564
                     /locus_tag="CPT85_08215"
     CDS             55..564
                     /locus_tag="CPT85_08215"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21180.1"
                     /translation="MKKFLVLIFMFFFITPLAANCEGMVLQAGVSLSDKVPSGFFGTW
                     KITSTISYTNNKDMFNEVTTDFWNLSKVGDVITLTNPVSGAEASVTVEDVKGNQIKFT
                     HVTQNKNAKMTESPTLTLNGENFYGTDKIVIEKYKYGEKVSSDVVIYKIKAQKISGNS
                     AQSIFMSER"
     gene            590..1540
                     /gene="trxB"
                     /locus_tag="CPT85_08220"
     CDS             590..1540
                     /gene="trxB"
                     /locus_tag="CPT85_08220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010631919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="DAB21181.1"
                     /translation="MSEKQKLEYDVVILGGGPAGLSAAIYAARGNAKTAVVDISMFGG
                     QPSNYLELENYPALGKIGGYDMMEKFEEHADMFSIDKFPMQEIEKIDLQPETKIIETK
                     DSVFEAKTVIIATGAQAKKLGIPGEKEFVGRGVSYCAVCDGAFYRDKVVAVVGGGNAA
                     VEEGCYLTKFAKKVYIIHRRDQLRADKIVQDRAFKNDKVEFIYDTIPVEIKGKDCVES
                     FVLKNVKTNETFEIETDGVFPYIGFAPNIDYINAQVQQNEAGFIVTNECMETSVKGVY
                     AIGDVRTTPLRQVITAAADGAVAGCFAVKYLEEIAEKTAV"
     gene            complement(1537..2181)
                     /locus_tag="CPT85_08225"
     CDS             complement(1537..2181)
                     /locus_tag="CPT85_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="DAB21182.1"
                     /translation="MKDSKKNIDKIIKGIKDANLPQRDFVKMMETFHDPFKVLICCIL
                     SLRTNDLTTYPCSLRMLELGTKPEDFLKIDVDTLAKAIYPVGFYRNKAQQILDISKEI
                     MEKYNGKVPGSIDELVKFKGVGRKTANLVMAKGFDKPAICVDVHVHRISNRLGWVKTK
                     TPEETEMALRELLPEKYWLDINTILVTFGQNLCKPQRPMCEVCPITEYCENFKG"
     gene            complement(2252..2431)
                     /locus_tag="CPT85_08230"
     CDS             complement(2252..2431)
                     /locus_tag="CPT85_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002583012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="DAB21183.1"
                     /translation="MKVKINDGCIACGACESVCDAVFSIEDVAVVNEAAVAGNEDCVK
                     EAAESCPVGVIEVEE"
     gene            complement(2535..3197)
                     /gene="cysE"
                     /locus_tag="CPT85_08235"
     CDS             complement(2535..3197)
                     /gene="cysE"
                     /locus_tag="CPT85_08235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003870685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="DAB21184.1"
                     /translation="MLLKRAFEQIKEDIKTIYDKDPAADNIIEVLLCYPGLHALILHR
                     IAHKLRYWGIPVIPRMISYFSRILTGIEIHPGARIGRRFFIDHGMGVVIGETTYIGND
                     VLIYQGVTLGGTGKEHGKRHPTLEDNVIVGAGAKVLGNLRIGKNSRIGAGSVVVDNVP
                     DDCTVVGIPGRIVHQRIMVDGQLMHNRMPDPVKCQLNRLNYEVQEIKEQLNITTSGRT
                     DC"
     gene            complement(3210..4136)
                     /gene="cysK"
                     /locus_tag="CPT85_08240"
     CDS             complement(3210..4136)
                     /gene="cysK"
                     /locus_tag="CPT85_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004511507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="DAB21185.1"
                     /translation="MAQIYENILELIGKTPLVKLNKINTGFADVAVKLEYFNPGNSVK
                     DRPALNMIEKAEQEGLIDEDTVIIEPTSGNTGIGLALVCAVKGYKLVLTMPESMSVER
                     RKMLSAYGADLVLTPAEAGMKGAVNEALKISEHCEKSFIPSQFSNPANPDVHEKTTAQ
                     EIIKDTDGKIDIFVASFGTGGTISGVGKALKAFNPEIKIIGIEPAESPLITQGKAGSH
                     GIQGIGANFIPQNLHKEFIDEIVTITTKDAIETAIEMSKKEGICCGISSGANVKAAIE
                     LSKMPENKGKLIVAMTCDYGERYLSTPLCEIK"
     gene            complement(4136..5362)
                     /locus_tag="CPT85_08245"
     CDS             complement(4136..5362)
                     /locus_tag="CPT85_08245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013405969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="DAB21186.1"
                     /translation="MEEKFVLKEEFIKQAQEISRGAELLPGGVKELAIKLQKSKESGK
                     PIRVKLGMDPTRPDLHLGHTVVMKKLKKFQELGHTIVLLVGGATAMVGDPSGKSETRP
                     ALTKEQVEENAKTYFEQMSKVLDTTKAEVVNNADWLHPMQLTELLKLASNVTVAQMMT
                     RDDFAKRYAEGKPISIHEFFYPLMQAYDSVAIDADIELGGTDQRFNVLLGREIQAAYG
                     KPNPQMVMLLPLIEGTDGQVKMSKTYPEHCISLTDSAKDMYGKLMSIPDTLIIKYFSL
                     LTDISDEELKNIEERLKTENPRNIKMELAYTITNEYYNDEETKKAQDEFINVVQNKGI
                     PEDIETYEIKEEKNILDLLVELGFVASKGEAKRLIAGGGVKIDNEKISDTAFIVKPPA
                     EPVVLQAGKRKYMRLK"
BASE COUNT         1538 a         1035 c         1014 g         1939 t
ORIGIN      
        1 tgacactaga ttaattggga ttgatatttt tttagggaac cttatatatt aattatgaaa
       61 aaatttcttg tattaatttt tatgtttttc tttataactc cattagctgc caattgcgag
      121 gggatggtgc ttcaagccgg agtttcttta tcagataaag tgccatcggg atttttcggt
      181 acatggaaaa tcacttcgac aatttcttac acaaacaaca aagatatgtt taatgaagta
      241 actacggatt tttggaactt atcaaaggtt ggtgacgtca ttacattaac aaatcctgtt
      301 tcgggtgcag aagcgtctgt tactgttgag gatgttaaag gcaaccagat aaaatttaca
      361 catgttacgc aaaacaaaaa cgctaaaatg acagagtctc cgactttgac attaaatggt
      421 gaaaattttt atggaactga taaaatagtt atagaaaaat ataaatacgg ggagaaagtg
      481 agttcggatg tcgtcattta taagataaag gctcaaaaaa tttccggaaa ctccgctcaa
      541 tcgatattta tgagtgaaag atagttttaa tcagatagag agagaaaaaa tgagtgagaa
      601 acaaaaatta gaatacgatg tagtgatatt gggcgggggg cctgcaggtc tttcggctgc
      661 tatttatgca gccagaggca atgcaaaaac tgctgtagtg gatatttcca tgttcggcgg
      721 tcagccttca aattaccttg agctggaaaa ttatccggca ctcggtaaaa tcggcggata
      781 cgacatgatg gaaaaatttg aagagcatgc tgatatgttc agcatagata aattccctat
      841 gcaggaaatt gaaaaaattg atttacagcc cgaaaccaaa ataattgaaa caaaagactc
      901 tgtttttgaa gcaaaaacag tgattattgc aacaggcgct caagccaaaa aactgggtat
      961 tccgggagaa aaagaatttg taggcagagg cgtgagctat tgcgcagttt gtgacggtgc
     1021 tttttaccgg gacaaagtgg ttgcggttgt gggtggcggc aatgctgctg ttgaagaagg
     1081 ctgttattta acaaaatttg ccaaaaaagt ctatattata cacagacgtg accagttaag
     1141 agctgataaa attgttcaag accgtgcttt taaaaatgac aaagtagagt ttatttatga
     1201 cactatccct gtagaaatca aaggtaaaga ctgtgttgag tcatttgttt tgaaaaatgt
     1261 taaaactaat gaaacttttg aaatagaaac agacggcgta ttcccataca taggctttgc
     1321 tccgaatatt gactatataa acgcacaggt gcagcaaaac gaagcaggtt tcattgtgac
     1381 aaacgaatgc atggaaacat cagttaaagg cgtttatgca attggtgatg tgagaacaac
     1441 gccattgaga caggttatta cagcagcagc cgacggtgct gttgcaggat gttttgcagt
     1501 gaaatacctt gaagaaattg cagaaaaaac agcagtttaa cctttaaagt tttcacaata
     1561 ctctgttatt ggacaaactt cgcacatagg cctttgaggc ttgcataaat tttgaccgaa
     1621 tgtgacaagt attgtattta tatcaagcca gtatttttca ggtaaaagct ctcgaagtgc
     1681 catttcagtt tcttcgggag tttttgtttt tacccagcct aatctgtttg aaatcctgtg
     1741 tacatgcaca tccacacaaa ttgccggttt gtcaaaaccc tttgccatta caagattcgc
     1801 tgtttttctt ccgacccctt taaattttac aagctcatca atagagccag gtactttgcc
     1861 gttatatttt tccattattt cttttgaaat atcaagaatc tgctgcgctt tatttctgta
     1921 aaaccctact ggataaattg cttttgccag tgtatcaaca tctatcttta aaaaatcttc
     1981 aggttttgtg ccaagctcaa gcattctcaa agagcaaggg tatgtggtga ggtcgtttgt
     2041 tctgaggctc aaaatgcagc atattaacac tttaaaaggg tcatggaatg tttccatcat
     2101 ttttacaaaa tctctttgcg gaaggtttgc gtcttttatt ccctttataa ttttatctat
     2161 atttttttta ctgtctttca taatattatt ttttataaca aaaaaatcct tgaagcaaaa
     2221 ctccaaggat tttttgtata tagaataatg attattcttc tacttcgata acgcctacag
     2281 ggcaagattc agcagcttct ttaacacaat cttcgttacc ggcaacagca gcttcgttaa
     2341 ctacagctac gtcttcgata gaaaatactg catcgcaaac tgattcgcaa gcgccgcaag
     2401 ctatgcatcc gtcattaatt tttactttca tttttttctc cttttaccat aatttataaa
     2461 gtgaattgtt tcacaactcc attatacaaa aaaaatttta aaatatacaa actgtaaaat
     2521 taagaactgt aaatttaaca gtctgttctg ccgcttgttg taatattcag ctgttcttta
     2581 atttcctgta cttcatagtt taatctgttg agctggcact taacagggtc gggcattctg
     2641 ttgtgcatca actgaccgtc taccattata cgctggtgta caatccttcc cggtatacct
     2701 acaactgtac agtcatctgg cacattgtcc acaactactg aacctgctcc tattctggag
     2761 ttttttccta tacgaaggtt gccaagcact tttgctccgg ctccgacaat cacattatct
     2821 tccaatgtcg ggtggcgttt tccgtgttct ttgcctgtac cgccgagtgt tacaccttga
     2881 tagataagca catcatttcc tatataagtt gtttctccaa taacaacacc catcccgtgg
     2941 tcaataaaaa atcttctgcc tatccttgcg ccggggtgta tttcaattcc tgttaatatc
     3001 cttgaaaaat atgaaatcat ccttggtatg acaggtattc cccagtatct tagtttgtga
     3061 gcaattctgt gtaatattag tgcatgtaac ccagggtagc acaataatac ctctattata
     3121 ttatctgccg cagggtcttt atcgtagatt gtttttatat cttcttttat ctgttcaaaa
     3181 gctcttttta ataacatttt ttgccttaat tacttaattt cgcatagtgg tgtggatagg
     3241 tatctttcac cgtaatcaca agtcattgca actattaatt tgcctttgtt ttcaggcatt
     3301 tttgatagtt caattgcggc ttttacattt gctccggacg aaataccgca gcagattcct
     3361 tctttttttg acatttcaat tgctgtttca attgcatctt tcgttgtgat tgtgacaatt
     3421 tcatcaataa actctttatg taaattttga ggaataaaat ttgcaccgat accttgaatg
     3481 ccatggcttc ctgcttttcc ttgtgtaatt agcgggcttt cggccggttc tattcctatt
     3541 atttttattt cgggattaaa cgctttaagt gctttgccta ctcctgatat tgttcctcct
     3601 gtaccaaaag atgcaacaaa aatgtctatt ttgccatctg tatctttaat aatttcttga
     3661 gcagtagttt tttcatgtac atcagggttt gccggatttg aaaattgaga aggaatgaag
     3721 cttttctcac aatgttctga aatctttaat gcttcattta ccgcaccttt cattcctgct
     3781 tctgccggag taaggactaa atctgctccg tatgcggaaa gcatttttct tctttcaaca
     3841 ctcatacttt ccggcattgt cagcacaagt ttgtagcctt ttaccgcaca aacaagggct
     3901 aatccgatac ctgtattgcc gcttgtcggc tcaattatta cggtatcttc gtcaataagc
     3961 ccttcttgtt ctgctttttc aatcatatta agagcaggtc tgtcttttac cgaattgccc
     4021 gggttaaagt actccaattt tactgctaca tctgcaaaac ccgtgtttat tttatttaat
     4081 tttacaagag gagtttttcc tatcaattca agtatatttt cataaatttg agccattatt
     4141 tcagcctcat atattttctt ttgcctgctt gtaatacaac cggttctgcg ggtggtttga
     4201 cgatgaaagc tgtatcagat attttttcat tatctatttt tacaccgccg cctgcaatta
     4261 gtctcttggc ctcgccttta ctggcaacaa agccgagttc gacaagaagg tctaatatat
     4321 ttttttcttc ttttatttca taagtttcaa tgtcttcggg tattccttta ttctgcacta
     4381 cgttaatgaa ttcatcctgt gctttttttg tttcttcatc gttgtagtat tcgtttgtga
     4441 ttgtgtatgc caattccatt tttatgttgc gagggttctc tgttttaaga cgttcttcga
     4501 tattttttaa ttcttcatcg gaaatatcag taagaagact aaagtatttg ataattaaag
     4561 tatcaggaat agacattagt tttccgtaca tatcttttgc actgtcagta agggatatgc
     4621 agtgttccgg ataagttttt gacattttta cctggccgtc tgtgccttca attaatggca
     4681 gcagcataac catttgaggg ttaggttttc cgtatgctgc ttggatttct ctgccgagaa
     4741 gaacgttaaa tctttggtca gtaccaccga gttctatatc tgcatctatt gctacagagt
     4801 catatgcctg cataagcgga tagaaaaact cgtgaattga aattggtttt ccttctgcat
     4861 atctttttgc aaaatcatct cgtgtcatca tctgtgcaac agtgacgtta gaagccagct
     4921 ttaaaagttc agtaagctgc atagggtgaa gccagtctgc gttgtttaca acttcggctt
     4981 tggttgtatc cagcactttt gacatttgtt caaagtatgt ttttgcgttt tcttcaacct
     5041 gttcttttgt cagtgccggg cgggtttccg atttgcccga cgggtcgcct accattgctg
     5101 ttgctccgcc gacaagaagt actattgtgt gcccaagctc ctgaaatttt ttgagtttct
     5161 tcattacaac agtatgcccg aggtgaagat caggacgtgt aggatccata cccagtttta
     5221 cgcggattgg ttttcctgat tcttttgatt tttgtaattt tattgcaagc tcttttactc
     5281 cgccaggcag taattctgct cctcttgaaa tttcttgagc ctgttttatg aattcttctt
     5341 taagtacgaa tttttcttcc atttatctat cctctgttta gtattttgtt tttattgtag
     5401 caaaaataaa ataagtaaaa taggacggga gaatcatttt ttaacccgtc ttgtttattt
     5461 aatcattttt ttactaaatt tttgtatata aagattctga aatattaata aactctctga
     5521 caaggt
//
LOCUS       DABS01000181            2826 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_26039, whole genome shotgun sequence.
ACCESSION   DABS01000181 DABS01000000
VERSION     DABS01000181.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2826)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..407)
                     /locus_tag="CPT85_08250"
     CDS             complement(<1..407)
                     /locus_tag="CPT85_08250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018590403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
                     /protein_id="DAB21160.1"
                     /translation="MELKGSKTEKNLMEAFAGESQARNKYTYYASQAKKEGYVQISKI
                     FEATAENEKEHAKLWFKLLHNGQIADTMTNLEDAANGENYEWTQMYAQFAKEAEEEGF
                     SDIAFLFKKVAEIEKHHEDRYKKLLENVKNGKV"
     gene            complement(447..584)
                     /locus_tag="CPT85_08255"
     CDS             complement(447..584)
                     /locus_tag="CPT85_08255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004372607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="DAB21161.1"
                     /translation="MKKFVCNVCGYVYDPAENGNVAFEDLPEDYTCPLCGVGKEDFSE
                     E"
     gene            complement(607..918)
                     /locus_tag="CPT85_08260"
     CDS             complement(607..918)
                     /locus_tag="CPT85_08260"
                     /inference="COORDINATES: protein motif:HMM:PF01475.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21162.1"
                     /translation="MQKQFTKRLSINCLQYLXXXASLEELNMIFRVDNQLPKARFDAD
                     KTPHHHFLCVQCNEVYDIFLEDSEKINIPKNASNFGEIKDLNLQIRGICNKCLKGKNN
                     K"
     gene            complement(794..1060)
                     /locus_tag="CPT85_08265"
     CDS             complement(794..1060)
                     /locus_tag="CPT85_08265"
                     /inference="COORDINATES: protein motif:HMM:PF01475.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21163.1"
                     /translation="MNKNASKEQYLQQKLEELKTICQEKGMRLTQQRIEIYKEVASSC
                     EHPDAETVYEAVKHKLPTVSMXXCFSRRIKYDIQSRQPASQGPF"
     assembly_gap    861..865
                     /estimated_length=5
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1197..1502)
                     /locus_tag="CPT85_08270"
     CDS             complement(1197..1502)
                     /locus_tag="CPT85_08270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013217791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding protein"
                     /protein_id="DAB21164.1"
                     /translation="MSYENKQITCADCGAEFTFSADDQEYYASKGYSEPKRCPACRAA
                     KKAQRGGGHGHGSRGGYGSRPQYSVTCSACGAQTTVPFEPKGDRPVYCSDCYRNMQH"
     assembly_gap    1675..1707
                     /estimated_length=33
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<1708..2823)
                     /locus_tag="CPT85_08275"
     CDS             complement(<1708..2823)
                     /locus_tag="CPT85_08275"
                     /inference="COORDINATES: protein motif:HMM:PF02321.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21165.1"
                     /translation="MLGSCLSALALDSKQLAYSEDDKFKISLQQAMEMALKGNIELQE
                     QRKNLGISQNDIKIANALKNPQFQSNLLMGRIAKANSSQLGITLPVEITKRGARKKAA
                     MASLDYTENKINDYEFKLKLRIRTAYFNLLVAKSDLKIMEERKELLEDLCKITRNKSK
                     KSDSYEIDVLQADMRLKKQLIQINKAKANVRTAQYNFNRILNLENNLTLYDSKEDSLF
                     DRAVVAEFNLPGYEALESAAFNNRYDIKMAEAKMIKAKRDIDVAIRQRIPDVYISGGY
                     AFAHDGTPGAYVGAGFDIPSLYMYNPEIKNARLNYEKAQLEYNSIINITKNVIHTNHD
                     KFVIAKENVDHYDEILTESREILKLSKQRYQKGKTPLT"
BASE COUNT          735 a          539 c          464 g         1050 t
ORIGIN      
        1 aaaacttttc cgtttttaac attttcaaga agctttttgt atctgtcttc gtgatgtttt
       61 tcgatttcag ctactttttt aaacaagaaa gcaatatcac taaagccttc ttcttcagct
      121 tcttttgcaa attgtgcata catttgcgtc cactcgtagt tttcgccgtt tgccgcatct
      181 tcaagatttg tcatagtatc agcgatttgt ccattgtgga gcagtttaaa ccacagtttt
      241 gcatgttctt tttcattttc agctgttgct tcaaaaatct tagatatctg cacgtaacct
      301 tcctttttag cctgtgaggc gtagtaagtg tacttatttc gtgcctgaga ttctcctgca
      361 aacgcttcca ttaagttctt ttctgtttta gaacctttta attccataat attctccttt
      421 gatgtttgtg ttcggccaga gcaaagttat tcttctgaaa aatcttcttt gcctacaccg
      481 cacaacgggc aagtatagtc ttccggtaaa tcttcaaaag ctacattgcc gttttcagca
      541 gggtcatata catatccgca tacattgcat acaaattttt tcatttttct ctcctttgtt
      601 tgctatttac ttgttatttt tacctttaag gcatttgttg cagattcctc taatctgcag
      661 atttaaatct tttatttcac caaagtttga tgcattttta ggtatgttga ttttttcact
      721 gtcttctaaa aagatatcat atacttcatt acactgtaca cataaaaaat ggtggtgagg
      781 tgtcttatcc gcgtcaaaac gggccttggg aagctggttg tctactctga atatcatatt
      841 taattcttct agagaagcaa nnnnncatag atactgtagg caatttatgc ttaaccgctt
      901 cgtaaactgt ttctgcatca gggtgttcac acgaacttgc aacttcttta taaatttcta
      961 ttctttgctg cgtaaggcgc atgccttttt cctgacagat tgttttgagt tcttccagtt
     1021 tttgttgtag gtattgctct ttagaagcat tcttattcat accgattcct taataagaat
     1081 tattcttatt taagtataac agacgttttt gacaaacgca agccctaaat taaaaaattc
     1141 agggcttgat ataaaactta ttattatatt tttatattaa ctgcgtttta atttgtttag
     1201 tgctgcatgt ttctgtagca gtcagagcaa taaacaggtc tgtcaccttt tggttcaaac
     1261 ggaacagttg tttgagctcc acaagcagaa caagtaacac tatactgggg tctgcttccg
     1321 tatccgcctc ttgaaccatg gccatggccg ccgcctcttt gtgctttttt agcagctctg
     1381 caagcagggc atctttttgg ctctgaatag cctttagatg catagtattc ctgatcatct
     1441 gctgaaaatg taaattccgc accgcagtca gcgcatgtga tttgtttgtt ttcgtaactc
     1501 ataagttacc ctttcttttt gtacttacac cactatgcgc taaatattta aaaaagtcta
     1561 tcaatttttt atattagaat aatttattta caaatcagca acagcagaaa ttgtatcaga
     1621 acctatttct tgcaaaagag caatatatgc attgtaatat accccgatgg caggnnnnnn
     1681 nnnnnnnnnn nnnnnnnnnn nnnnnnnggt aagaggagtt tttccctttt gatatcgttg
     1741 ttttgagagt ttaagtattt ctcgcgattc tgttagaatc tcatcataat gatcaacgtt
     1801 ttcttttgca ataacaaatt tgtcatggtt tgtatggatt acgttttttg taatatttat
     1861 tatggaattg tattcaagct gagctttttc ataattcaga cgtgcgtttt taatttccgg
     1921 gttgtacatg tacaaagaag gtatatcaaa cccggcacca acatatgcac cgggagtgcc
     1981 gtcatgggca aaagcataac cgcctgatat ataaacgtca gggattcttt gtcttattgc
     2041 aacatcaatg tcccttttag cttttatcat tttagcttct gccattttta tgtcatatct
     2101 gttattaaaa gcagcagatt ccaacgcctc atatcctggc agattaaact cggccacgac
     2161 agctctgtca aataaagagt cttctttaga atcatagagt gtaagattat tttcaagatt
     2221 tagtattctg ttaaagttat actgcgctgt tctgacattg gcttttgctt tattgatttg
     2281 gattaattgc tttttcagtc tcatatcagc ttgcagaaca tctatttcat agctgtcaga
     2341 tttttttgat ttattgcgtg taatcttgca taaatcttct aacagctctt ttctctcttc
     2401 cattatttta aggtctgatt ttgcaacaag gaggttaaaa taagctgttc taatacgaag
     2461 tttgagtttg aattcgtaat cattaatttt attttctgta taatccaaag aggccatagc
     2521 agcttttttt cttgcacctc tttttgtaat ttcaacaggc aaagtaatac caagctggct
     2581 agaattcgcc tttgcaattc tccccattaa aaggtttgat tgaaactgcg ggtttttaag
     2641 tgcattagca atttttatat cattttgaga aataccaaga ttctttctct gttcctgcaa
     2701 ttcaatattg ccttttagag ccatctccat ggcctgctgc aaggatattt taaacttatc
     2761 atcctccgaa tacgcaagct gtttagagtc cagcgctaac gccgacagac agctacccag
     2821 caatat
//
LOCUS       DABS01000182            6001 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_11204, whole genome shotgun sequence.
ACCESSION   DABS01000182 DABS01000000
VERSION     DABS01000182.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6001)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6001)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6001
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            26..529
                     /gene="leuD"
                     /locus_tag="CPT85_08280"
     CDS             26..529
                     /gene="leuD"
                     /locus_tag="CPT85_08280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017825908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="DAB21132.1"
                     /translation="MNTPLVGNCWKYDDNVDTDVIIPARYLNTSDEKELASHCLEDID
                     KTFATNVNTGDIIIAGENFGCGSSREHAPIAIKASGVSVVIAKSFARIFFRNSINIGL
                     PILENSLIADESDKGDKISVDLQNGIVKNLTKNKEYKCEKFPAEIQELIAQGGLINYT
                     KKKMGVK"
     gene            532..1608
                     /gene="leuB"
                     /locus_tag="CPT85_08285"
     CDS             532..1608
                     /gene="leuB"
                     /locus_tag="CPT85_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006459446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="DAB21133.1"
                     /translation="MKNKIALLGGDGIGPAVIDEGVKILNAIEKKYGIQFEYERALIG
                     GCAYDDCKKPLPDSTISTAKAADAVYLGAVGDWKYDTLPSDLRPEKALLGIRKELNLF
                     ANLRPAIVFDELLESSTLKPEVVKGVDIMMVRELTGDVYFGQPRGIEMIDGQRAGFNN
                     MIYYEKEVERIAHVAFQTAMKRNKKLCSVDKANVLDSSRLWREVITTISSQYPQVELT
                     HMYVDNAAMQLIRNPKQFDVVVTGNIFGDILSDESSMLSGSLGMLPSASLSDKNPGMY
                     EPIHGSAPDLKGKNTVNPIATILSAAMMMRYSFGLDEAAIDIENAVKSVLKKGYRTQD
                     IFSQGTQLVGTTQMGDLIAKEILS"
     assembly_gap    1620..1645
                     /estimated_length=26
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1766..2626)
                     /locus_tag="CPT85_08290"
     CDS             complement(1766..2626)
                     /locus_tag="CPT85_08290"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21134.1"
                     /translation="MNNSIIQAQCVNLKELNHLFIDLEYTKTQNKNFNVYRSRSFNQK
                     NKKYLQLDEIKDALKQVDKSKLKYIYLTGKNSMTHPEFNHILRLCLTYCSVTIFSDGS
                     CINDKKSRFLKRVEEEGNNEIIFKIEINHYDEKTNDEISGRGSFRKAIHAVTSLNKYG
                     FNPILVIKSMEDNIEDLKEGFIELGAKFKFETEDINFCFIPAIEKNKVCNDNIDNCKN
                     NAANCELDCMNSRLLTKSGVYNCPLLINDYRGRSGASLGDFSYKCYLETEECQQCTQY
                     GKRIYSNNWV"
     gene            3092..3385
                     /locus_tag="CPT85_08295"
     CDS             3092..3385
                     /locus_tag="CPT85_08295"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21135.1"
                     /translation="MKKLSTILLAAVFMFNAGASFAASNALQEYQAKRDPAIKRHDAK
                     LNEIQKRQEEAQKKREADKAAYKKKQQAQKEAFQKRQQQRKDAVKNLKDSFKY"
     gene            3455..3895
                     /locus_tag="CPT85_08300"
     CDS             3455..3895
                     /locus_tag="CPT85_08300"
                     /inference="COORDINATES: protein motif:HMM:PF03938.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21136.1"
                     /translation="MKKLLTLIALLALATPVLAADKYASVDIDKVLKGYKKTEAINKD
                     FQKREADIRVFIVDAQKSVVAATTDADRKKLEEKYAKELKSKMDKLQQDKIKALQGIE
                     NNVKKAIQAEGQKGTYALILTSNNALYGTVDISDSIIKTLNAAP"
     gene            4160..>6001
                     /locus_tag="CPT85_08305"
     CDS             4160..>6001
                     /locus_tag="CPT85_08305"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21137.1"
                     /translation="MNFNNYKNIGNTNKNQSDTEKTGVESKHSNPIIPSGLISKINTI
                     NNRTTANRMYAGYNQKAWRTSENIDYHEVIKFINEVTYNKDNKNELFYSLHNIFVNKL
                     NAGFSAFGLYCEQSNCINFKIIDKIGSTFTSRILLNGSDNPVEKAFTSRTTQFTDSNK
                     FLNVHYLSESGVAIVPLIAINQCIGVMLVGDDNYEASSDIYKLMANYLALFIQNKDLS
                     AKVLMNTDTDALTGLNNHRKFQEKLASEIDKAQRTQTQTSIVIFDINNISQINKDFGA
                     AKGDEIIKLVADKIKQGIRSNDSAARYGGDEVAIILPETNSAEAKYLAEYLTYSLSCC
                     LVDDVGPIKVSVGIATYPNSTKDLEKLLILAEQAMFISKSKGYKNGMSTIVCSDDFDF
                     WDDTALSSFASVIAKRHASIGINFDEELVNKFHSEEIINQGHLIEVVTSLASAIDAKD
                     EYTKGHSSSVSRYSEALARALNLPEKDVERIKLGALLHDIGKIGIPENVLKKPSKLTD
                     EEWEIMKQHPTIGAEKVLMPNESLHDLIPIVKYHHEHWDGSGYPEKLKGEDIPLAARI
                     VSVADAYHALISDRPYRKGMSNEKACEILKVGAGIQWDKNLVSEFINI"
BASE COUNT         2186 a          965 c         1039 g         1785 t
ORIGIN      
        1 tgaaatttgt aaatggagat taagcatgaa tacaccactt gtaggaaatt gttggaaata
       61 tgatgacaat gttgatactg atgttataat accggctcgt tatttaaata catcagatga
      121 aaaagaactt gcttcacatt gtcttgaaga tatagacaaa acttttgcaa caaatgttaa
      181 tacaggagat ataataattg ctggtgaaaa ttttggctgc ggaagctcgc gagaacatgc
      241 acctatagca attaaagcaa gcggagtttc tgttgtaatt gcaaaatctt ttgcaagaat
      301 attttttaga aattcaataa acataggtct gcctatttta gaaaattctc ttatcgcaga
      361 tgaaagtgat aaaggggaca aaataagcgt tgatttgcaa aacggaattg taaaaaattt
      421 aacaaaaaac aaagagtaca aatgtgaaaa atttcctgct gaaattcaag aacttattgc
      481 tcaaggcgga ttgataaatt atacaaaaaa gaaaatggga gttaaataaa tatgaaaaat
      541 aaaattgcat tgcttggcgg agatggtatt ggcccggctg ttatagatga aggcgttaaa
      601 attttaaatg caattgaaaa aaaatacgga attcaatttg aatacgaaag agcattaatt
      661 ggaggctgtg catatgacga ctgcaaaaaa ccgcttcccg actcaactat ttctacggcc
      721 aaagcagctg atgcagttta tcttggtgct gtaggtgatt ggaaatatga tacacttcct
      781 tctgatttaa gaccggaaaa agcactttta ggcataagaa aagaattgaa tctttttgca
      841 aatttaagac ccgcaattgt atttgatgag ctgcttgaat catctacatt aaaaccggaa
      901 gttgtcaaag gcgttgatat aatgatggtt agagaattaa caggcgatgt atactttgga
      961 caaccgcgag gaatagaaat gatagacggg cagcgcgcag gttttaacaa catgatttat
     1021 tatgaaaaag aagttgaaag aatagctcat gttgcttttc aaacagctat gaaaagaaat
     1081 aaaaaacttt gctctgtaga caaagctaac gtgctcgatt catcaagatt gtggcgagaa
     1141 gtgattacaa caatttcaag ccaatatccg caggttgaat tgactcacat gtatgttgat
     1201 aatgcagcaa tgcagcttat cagaaacccg aaacaatttg atgtggttgt gacaggcaac
     1261 atattcggtg atattttatc ggacgaatca tcaatgctgt ctggttctct tggcatgctg
     1321 ccaagtgcca gtttgtcaga taaaaatcct ggtatgtatg agcctataca tggttctgct
     1381 cccgatttaa aaggaaagaa caccgtaaac cctatagcaa caatactctc tgctgctatg
     1441 atgatgagat attctttcgg gcttgatgaa gctgcaattg atatagaaaa tgctgttaaa
     1501 tctgtattaa aaaaaggata cagaacacaa gacatttttt cacagggcac acaacttgta
     1561 ggcacaacgc aaatgggcga tttgatagca aaagaaattt tatcttaact atttttaatn
     1621 nnnnnnnnnn nnnnnnnnnn nnnnnaatgt ggcattatat acatgcgggt cagttaacat
     1681 ccaggcactt ttttcggggt tgcgataaaa aaagatttta ggcttggttt aaaagttttc
     1741 ggacctgctt ctttttgctc tgtttttata cccaattgtt gctgtaaata cgcttgccgt
     1801 attgagtaca ctgctggcat tcttcggttt caagataaca tttgtagcta aaatcaccca
     1861 aagatgcacc tgagcggcct ctgtaatcat tgataagcaa aggacaattg tacacacctg
     1921 actttgttaa caaacgagaa ttcatacaat caagctcaca gttagctgca ttatttttac
     1981 aattgtctat attgtcatta caaactttat ttttttctat agcaggaata aaacaaaaat
     2041 ttatgtcttc tgtttcaaat ttaaatttgg caccaagttc tataaatcct tcttttaaat
     2101 cttcaatatt atcctccatc gacttgataa caagtatagg gttaaaacca tatttgttta
     2161 atgaagttac tgcgtgtatg gcttttctaa aagaacctct gcctgaaatt tcatcgtttg
     2221 ttttttcatc gtaatgatta atctcgattt taaaaataat ttcgttattg ccttcttctt
     2281 caacgcgttt taaaaatctt gactttttat cgtttataca gctgccgtca gaaaaaattg
     2341 tcacagagca gtatgtaaga caaagtctta atatgtggtt aaattcagga tgagtcattg
     2401 aatttttacc tgtaagatag atatatttca attttgattt gtctacttgc tttaaagcat
     2461 cttttatttc atccaattga agatattttt tgtttttttg gttaaaactt ctgcttctgt
     2521 acacattaaa atttttgttt tgtgtttttg tatattccaa atctataaat aagtgattta
     2581 attctttaag atttacacat tgcgcctgaa taatagagtt gttcattaat accattcctc
     2641 cttaatatct ccaatcgttg taacgatttt aattgcaatt cgaaagataa taaatagtac
     2701 aggtggacaa aatatcatta aactttttat catattttga cgaataatta ttttggttaa
     2761 aatttgaaca agctcttcta aatataatta atgatatttt taaagttttt tacacaattg
     2821 ccgaatgaaa aaatataaat aaatttagga gaataatgta atggccgaaa tcatcgaaaa
     2881 catgaatgga agaaggctca tcagggtatc aaccgatgat attatttctc ttgtcagaga
     2941 ataccagcaa tatgcttgtg aatcgtcatc gtacagggaa ataagagaaa agcttgataa
     3001 aaaagatatt tatctgcctg aagattttta acttgaaaag tactaaaaat attgctataa
     3061 tcctgtcctg agaaacggag gattattaat tatgaaaaaa ctttcaacaa tcttattagc
     3121 agcagtattt atgtttaatg caggcgcatc atttgctgca tcaaacgctc ttcaagaata
     3181 tcaagccaaa agagatccgg cgataaaaag acatgatgca aaactaaatg aaattcaaaa
     3241 aagacaagaa gaagctcaaa agaaaagaga agctgacaaa gctgcataca agaaaaaaca
     3301 acaggctcaa aaagaagcat ttcaaaaaag acaacagcaa agaaaagatg cggtaaaaaa
     3361 cctgaaagac tcttttaaat actaatttat atttactaaa ttattttaat atgatagtct
     3421 tatgtagata taaataaacg aaaagagaaa attgatgaaa aaactactta ctttaattgc
     3481 acttttagca ttggcaacac ctgttttggc tgctgacaaa tatgcttctg ttgatattga
     3541 caaagtttta aaaggttaca aaaaaactga agcaatcaac aaagattttc aaaaaagaga
     3601 agctgatatc agagtgttca tcgtcgatgc acaaaaaagt gtagtagctg ctacaacaga
     3661 tgctgacaga aaaaaacttg aagaaaaata tgcaaaagaa ctaaaatcaa aaatggataa
     3721 actccagcag gataaaatca aagctcttca aggaattgaa aacaacgtaa aaaaagcaat
     3781 tcaggcagaa ggacaaaaag gtacttatgc tctgatttta acaagcaaca atgctcttta
     3841 cggaactgtt gatatttcag acagcattat aaaaacattg aatgcagctc cttagtcagc
     3901 agcattcata aaaaaagcac ttctttttca aaaagaggtg cttttttatc ccttttttac
     3961 aaatacgaat tgtaacattc atttttacaa aaaaatttta ataaaaagtt aaaaaaatct
     4021 aaatattaca catctttaca aagatacata atacctgtta caatacttaa aattgtaaaa
     4081 attattaatt aaaaggttga aaaaaagcaa atttttaaga ttagggtttt tatactaatc
     4141 gtatcaggaa ggtcccgctg tgaatttcaa taactataag aatattggaa atactaataa
     4201 aaatcagtcc gacactgaaa aaaccggagt tgaatctaag cattcaaacc ccataattcc
     4261 cagcggatta atttccaaaa tcaatacaat aaataacaga acaacagcaa accgtatgta
     4321 tgccggttat aaccaaaaag catggcgtac ttctgaaaac attgactacc acgaggttat
     4381 aaaatttatt aatgaagtaa cctacaacaa agacaacaag aacgaactgt tttattcttt
     4441 gcacaacata tttgtgaaca aactgaatgc aggtttctcc gcattcgggc tttattgcga
     4501 gcaatcaaac tgcataaact ttaaaattat tgataaaata ggttcaacgt ttacaagcag
     4561 aattctatta aacggctctg acaaccctgt tgaaaaagcg tttacctcca gaacaacgca
     4621 attcactgac agtaacaaat ttttgaatgt tcattatttg tcagaatcag gtgttgccat
     4681 agtaccatta attgctataa atcaatgtat aggcgttatg cttgtgggtg atgataacta
     4741 tgaagcatct tctgatattt acaagctcat ggccaattat cttgcactgt ttattcagaa
     4801 caaagatttg tctgcaaaag tattgatgaa cacggataca gacgcactta caggcttgaa
     4861 caaccataga aaatttcagg aaaaactagc aagtgagatt gataaggcac agagaactca
     4921 aacacaaaca tctatcgtta tttttgatat aaacaacatc tcacaaataa ataaagactt
     4981 tggtgctgca aaaggtgatg aaatcatcaa acttgttgca gacaaaataa aacagggaat
     5041 aagaagtaat gactctgctg caagatacgg aggcgatgaa gttgcaatta tcctgccgga
     5101 aacaaactcc gcagaagcaa aataccttgc agaatacctt acttattcat tgtcttgttg
     5161 tcttgttgac gatgttggcc ctataaaggt ttctgtcggt attgcaacat atccaaactc
     5221 aactaaagat ttagaaaaac ttttaattct tgcagaacaa gctatgttta tttcaaaaag
     5281 caaaggctac aaaaacggta tgtctacgat tgtttgctct gatgactttg atttttggga
     5341 tgacacagcg ttgagctcat ttgcatcagt tatagcaaaa agacacgcat caattggtat
     5401 aaactttgat gaagagcttg tgaataaatt ccattcagaa gaaataataa accagggtca
     5461 tcttattgaa gttgtaacat cactggcaag cgcaattgat gcaaaagatg aatacacaaa
     5521 aggccactct tcatctgtat caagatactc tgaagcgctg gcaagagcac tcaatctgcc
     5581 ggaaaaagat gttgaaagaa ttaagctcgg tgcattgctt cacgatatcg gcaaaatagg
     5641 catccctgaa aacgttctca aaaaaccttc gaaattaact gacgaagaat gggaaataat
     5701 gaagcagcat ccgactattg gcgcagaaaa agtgcttatg ccaaacgaat cgcttcacga
     5761 tttgatacct attgtaaaat atcaccacga acactgggac ggttctggat atccggaaaa
     5821 acttaaaggt gaagatattc ctcttgccgc aaggattgtt tcagttgccg atgcttatca
     5881 cgctttgatt tcagacagac cttatcgtaa gggtatgtct aatgaaaaag cctgtgaaat
     5941 actcaaagtc ggcgccggca tacaatggga taaaaacctt gtcagcgagt ttattaatat
     6001 t
//
LOCUS       DABS01000183            3163 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_16239, whole genome shotgun sequence.
ACCESSION   DABS01000183 DABS01000000
VERSION     DABS01000183.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3163)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3163)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3163
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..281
                     /locus_tag="CPT85_08310"
     CDS             <1..281
                     /locus_tag="CPT85_08310"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21113.1"
                     /translation="RCNDRIILIISVLLSVFVTMSVCYLLFTYMPAQKVIDNFQGRYL
                     LPLLPLGLVVFSFKKFCFKTNVFRYFTVIVSCILMFVSVIEIIKRFYI"
     gene            278..1627
                     /locus_tag="CPT85_08315"
     CDS             278..1627
                     /locus_tag="CPT85_08315"
                     /inference="COORDINATES: protein motif:HMM:PF09913.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21114.1"
                     /translation="MIMQDIKAFKAQNXXMGLFYLVINPPFQAPDEAQHMFKMWGYTQ
                     GTLRFKVLQNYTGDVLPLSLIKLSRYEFMRGDTNKKITVNEIKQSLNVKLDKENKAFY
                     TFNPTSYTPVSYFPSFLLLWAMKLLNIAPLVMMYMLRLCSLFLYTGLMYYAIKIMPVK
                     KWLFFTLALLPMPLYTAASVSTDALFTGIVFIFIAYCSRLALRPGKGRVLRRKHYLVI
                     GVLSLLISICKFAYMPLVLLYFIIPKDRFSSQKHRYYAFFAILLINLLVTGLFLVYSI
                     NAAKGLNTGTQGYESRFMISFIMQRFDWFLGFIFKTLSVKIHEYIAGFIGKLGWYDTV
                     LPSFVLKSFFAVILISAVFKTKGEERVFNLKSKLIFALIFVCCFFIIMCSAFILFQCH
                     PVICGVQGRYFMPVAPLLLLMFDNKKLAATKLPMFLTAVIPLLSIGAFWALITRFYG"
     assembly_gap    317..321
                     /estimated_length=5
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1633..3021
                     /locus_tag="CPT85_08320"
     CDS             1633..3021
                     /locus_tag="CPT85_08320"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21115.1"
                     /translation="MEFLSKNKNIILNTLLLLTYCALTIFCAMHHEIWRDEAQVWVVV
                     RDLNLFGIIDHVRIEGHPLLWYFIVMLPAKLKLPVFSMQVLSLGFMLCAAGLFLYRSP
                     FNIVTKACVLFSAGFLYWLSVISRSYSLVALFLFVLAMLYPMQRKRPFLYAVVLGLLS
                     QTHVLMSGFCAGMCALFLYDNIIKNKETPKKYIAPFLVCFLPLLLLTIYIFSNPHDNV
                     SVQNYMLKTDTSLFKSFISVLVNTYMFMTNIKGLFVTLLIAASFAGIFVENKKIFCVY
                     LFSMLYQLVVYTYIWSCAPEKAALFFAVTVFCWWVVLDCRPQNELSKTKKILYNILLA
                     VIFGMSVNVGFMLLKNDIRYDYSSSQKTAEFIEKNIEKDAVPVTFDPVFTSGISAYLK
                     NGQKFYYPDTGEYYTFSYDGRANTHLSAQEQTEFYKLHKNIYYIQNWLSPSQVPXXXP
                     TEKFYIIKRKGF"
     assembly_gap    2972..2977
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT          834 a          496 c          664 g         1158 t
ORIGIN      
        1 ttagatgtaa tgacagaata atattaataa tatcagtgct gttgtctgtt tttgtgacaa
       61 tgagcgtttg ttatcttttg tttacttaca tgcccgctca aaaggttata gacaattttc
      121 aaggcagata tcttttgccg cttcttcctt tggggttggt tgtgttttcg tttaaaaagt
      181 tttgctttaa aacaaatgtt tttagatatt ttacggtcat tgtttcgtgt attcttatgt
      241 ttgtaagtgt gattgagata atcaagaggt tttatatttg attatgcagg atatcaaagc
      301 ttttaaagcg cagaatnnnn naatggggct gttttacctt gtgataaacc ctccttttca
      361 ggcgcctgat gaggcgcagc acatgtttaa aatgtgggga tatacacagg ggactttgag
      421 gtttaaggtg ctgcaaaatt ataccggaga tgttttgccg ttgagcctca taaaattgag
      481 ccgttatgaa tttatgcgcg gagacacaaa caaaaaaatt actgtaaatg aaataaaaca
      541 gtctctaaat gtcaaactcg acaaggaaaa caaggctttt tatacgttta atcctacatc
      601 atatactcct gtttcttatt ttccgtcgtt tttgttgttg tgggcgatga agcttttgaa
      661 tattgcgcct cttgttatga tgtacatgct gcgtttgtgt tcgttgtttt tgtacacggg
      721 gcttatgtat tatgcaataa agattatgcc cgttaaaaaa tggctgtttt ttactctggc
      781 actgctgcca atgcctcttt acaccgctgc gtcggtatca actgatgctc tttttacggg
      841 tattgtgttt atatttattg cgtattgttc aagactggct ctcagaccgg gaaagggcag
      901 ggttttaaga cggaaacatt atcttgtaat tggtgttttg agcctgttga taagcatttg
      961 caaatttgct tatatgccat tggttctttt atattttata attccaaaag acaggttttc
     1021 ttctcaaaaa cataggtact atgcgttttt tgcgatttta ttgataaacc ttcttgtgac
     1081 tggcttgttt ctggtttatt ccatcaacgc tgccaaaggg ctcaatacag gtacacaagg
     1141 atatgaatcc cgttttatga tttcttttat catgcagcgt tttgactggt ttttaggttt
     1201 tatttttaaa acactttctg tcaaaataca cgaatatatt gcgggtttta ttgggaaact
     1261 cggctggtat gacactgttt tgccatcttt tgttttaaaa agtttctttg ccgtaattct
     1321 tataagcgct gtttttaaga caaaaggaga agagcgcgtt tttaatttaa aatccaagct
     1381 gatttttgct ttgatttttg tttgctgctt ttttatcata atgtgctcgg catttatact
     1441 tttccagtgt catcctgtta tttgcggggt gcagggcagg tattttatgc ctgttgctcc
     1501 tttattgctt ttgatgtttg ataacaaaaa acttgctgca acaaaactgc caatgttttt
     1561 gacagcggtt atacctcttt tgagcatcgg ggcgttttgg gcattgatta caaggttcta
     1621 cgggtaaggc atatggagtt tttgtctaag aataaaaata ttatattaaa tactttgttg
     1681 ttattaactt attgtgcgct cacgattttt tgtgcaatgc accatgagat atggcgtgac
     1741 gaagcacagg tgtgggtggt tgtcagagat ttaaatcttt ttggaataat cgaccatgta
     1801 agaatcgagg ggcatcctct gttgtggtat tttattgtaa tgctgcccgc aaagcttaaa
     1861 ctgcctgttt tttcaatgca ggtgttgagc cttggtttta tgttgtgtgc agccgggctg
     1921 tttttgtaca ggtcgccttt taatattgtg acaaaagcct gtgtactttt tagtgcgggc
     1981 tttttgtact ggttgagtgt aatttcgcgc agttattctc ttgtggcttt atttttgttt
     2041 gtactggcaa tgctttatcc catgcaaaga aaaaggcctt ttttgtatgc agttgttttg
     2101 ggtttgttgt cacagacaca tgttttgatg agcgggtttt gcgcaggcat gtgtgcgctg
     2161 tttttgtacg ataacataat aaaaaacaaa gaaacgccaa aaaaatatat agcacctttt
     2221 ttggtttgtt ttttgccgct tcttttgctt acaatttata ttttttcaaa tccgcatgac
     2281 aatgtgagcg tacaaaatta catgctcaaa acagacacaa gtctttttaa gagctttata
     2341 tcagtgctgg taaacaccta tatgtttatg acaaacatca agggactgtt tgttactttg
     2401 ttgattgcag cttcttttgc gggtattttt gtagaaaata aaaagatatt ctgtgtttat
     2461 ttattcagca tgctgtatca gctggtggtt tatacttata tatggtcatg tgcacctgaa
     2521 aaggcggctt tgttttttgc ggtgactgtt ttttgctggt gggttgtgct tgattgcagg
     2581 ccgcaaaatg aattgtcgaa aacaaaaaag attttgtaca atattttgct tgcagtgatt
     2641 tttggcatga gcgttaatgt ggggtttatg ttgttaaaaa atgatatccg ctacgattat
     2701 tcctcttctc aaaaaacagc ggagtttatt gagaagaata tagaaaaaga tgcagtgccg
     2761 gttacttttg accctgtttt taccagcgga ataagcgcgt atttaaaaaa cggccagaag
     2821 ttttattacc ctgatacagg tgagtattac acattcagct atgacggcag ggcaaatacg
     2881 cacctgagcg cacaggaaca aaccgaattt tacaaattac acaaaaatat ttattacata
     2941 caaaactggc tcagcccttc gcaggtgcct gnnnnnntac caacggaaaa attttatata
     3001 ataaaaagga aaggcttcta aattaaaatg aaaaggaata tcaatatact ctataccttg
     3061 ttgtacggta tttttacact aattgttgtg cttagtcacg aaatatgggc agacgaagcg
     3121 caagtgtggc agattgtgca gaatgtttca tttttaggtc tgt
//
LOCUS       DABS01000184           18081 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_11923, whole genome shotgun sequence.
ACCESSION   DABS01000184 DABS01000000
VERSION     DABS01000184.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 18081)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 18081)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18081
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            31..1422
                     /locus_tag="CPT85_08325"
     CDS             31..1422
                     /locus_tag="CPT85_08325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003515871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="DAB21091.1"
                     /translation="MAKLKTKWICQNCGYETAKYLGKCPDCGQWNTLVEEVFESISPS
                     QAAKTVLNETIPCLINDIEIDRSIRFTTGIEEFDRVLGGGLVQGSIVLLAGDPGIGKS
                     TILLQTGKAICKDGRTALYVSAEESASQVKLRAQRLGVQSNSLYIYSQTNFEAIKRQI
                     DEIKPQILIIDSIQAVYTDSVTSSPGSVSQIRECTNILMDIAKNKNITVVVIGHVTKE
                     GNIAGPKVLEHMVDTVIYFEGDRYKSYRLLRCMKNRFGTTNEVGVFNMCDDGLHEISN
                     PSELFLNERTQNNTPGSVIIATNEGSRPLLIEIQALVGTTSYPSPRRVSNGIDYNRLL
                     QILAVLEKRIGLNLSKQDVYVNVIGGLEIDEPAADLGVALAVATCARDVCVSPDTVIV
                     GEIGLSGEIRAINNLDKRIKESEKLGFKKIIVPQTNTLKKEEFKNINIVQVKRLMDAI
                     TACVSKSDKTTVS"
     gene            1488..2363
                     /locus_tag="CPT85_08330"
     CDS             1488..2363
                     /locus_tag="CPT85_08330"
                     /inference="COORDINATES: protein motif:HMM:PRK06986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliA/WhiG family RNA polymerase sigma factor"
                     /protein_id="DAB21092.1"
                     /translation="MHVYDDLLGEIVGYLTEMSEELEYSSYNKIKRLTDEELEALWHE
                     YLADKTQKALRDKLIVQYIYLTRYVIGRVKMNLPQTFSIEDITSFGVEGLIDAIEKYT
                     PDKGARFETYALMRIRGTIIDKIRSQDWVPRSTRKKIKEIKLVAEQLKQSLGRAATTT
                     ELAAAMNMEKEKIEALLADEMQVTSIYDKKGTSEESVEVIDTIQDENSKNPLEQLVDK
                     DVKHELQNALKRLPERERMIMVLYYHENMTLKEIGDTINVSESRVCQLHAQAIMKLKN
                     ILTTHRSDRLKQSIV"
     gene            2468..2968
                     /locus_tag="CPT85_08335"
     CDS             2468..2968
                     /locus_tag="CPT85_08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013275358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="DAB21093.1"
                     /translation="MSPQTQAGLDYSKVDEILSSYEYKKSNLIAILQKVQEEFRYLPT
                     DVMTYIGTKIEGLSPATVYGVATFYAQFSLQPKGKYEVKVCDGTACHVRGSMPVLNAI
                     HQCLKLVDGKFTTEDGLFSVETVSCLGACGLAPVVVVNGTVYPQMTADAIKTVIETIM
                     GEERGN"
     gene            2969..4825
                     /locus_tag="CPT85_08340"
     CDS             2969..4825
                     /locus_tag="CPT85_08340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013779524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="DAB21094.1"
                     /translation="MTATLINIKGEQEKVKEQIKAQGLRVLVCAGTGCVANGSLKVIE
                     KFKELGVNVRPMTHQDKVTIVPTGCHGFCEQGVLVVIPDLDVTYVRVKLEDVEEIVES
                     HIKEGKPVERLLYVDPKTQEHVFKNEEINFYAKQTRTTLANCGEINAESLDEALAVGA
                     YEALHKVLEKGNPDWVIEEITKSGLRGRGGGGFPTGMKWKFTAANKGGKSYVVCNGDE
                     GDPGAFMDRSVMEGDPHKLLEGMAIAGYAIGADEAYIYVRAEYPLAIHRLRVAIKEAE
                     ERGFLGKNIMGSDFNFEIHIKEGAGAFVCGEETALIASIEGERGMPRPKPPFPANKGL
                     FGRPTLINNVETLANVAPIILKGADWFSSMGTEKSKGTKTFALTGEVNNTGLIEVPMG
                     TTLREIVFDIGGGIRGGKKFKAVQIGGPSGGCLTEEHLDLPMDYDNLIAAGAMVGSGG
                     LVVMNEDTCIVEVARFFMNFTQNESCGKCVPCREGTKNMLKILERIVKGKGEMKDIET
                     LEELAVAVKDGSLCGLGKTAPNPVLSTLKYFKDEYIAHIKDKKCPAGVCEAMKIITID
                     PELCKGCTKCARTCPVGAIEGTVKNPHHIDQSKCIKCGACFNSCPFKAIKQN"
     gene            4840..6624
                     /locus_tag="CPT85_08345"
     CDS             4840..6624
                     /locus_tag="CPT85_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013275360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="DAB21095.1"
                     /translation="MSDKKTLIINGKEVEFTDDPNLLEVIRKAGFNVPTFCYRPDLTQ
                     YGACRMCVVEVEYPNGRTLINSSCTMPPEANIKVKTNTERTRRIRKTVLELLLANHDR
                     ECTTCDKSGKCELQQYAEEYGIKDVSKYVQLQKDRFQPIDDSNPSLVRDPNKCILCGA
                     CVRACAEFHGHAVLGFANRGSKTVVQPMAGKSLASVDCVFCGQCQAVCPTGALTIKNE
                     VNPVWSLITDPDTKVVAQIAPSVRVAIGEEFGLEPGENSIKLINAALKEIGFDLVFDT
                     NFSADLTIMEEAHEFVERVSKGENLPLFTSCCPAWVRYLETQHPDMLHHLSSCKSPQG
                     MLSPVLMELVPQYFDGFTKENMKIVSIMPCTAKKVEAKRAQLRKDGKFETDFVLTTQE
                     LAKMIKSAGIDFKSLEPAEGDSPFAQYSGAGTIFGASGGVAEAAVRTAYEFVTGEPLS
                     DLDIKGMRGVDKNHRCKDVELDIKGTKVKVRVVSTLKEAEKSLQEIKNGTADFHMLEV
                     MACPGGCINGGGQPLSFNDSKIKERRAQGLYKEDSELTYRRSNDNPDIKKLYKEYLEN
                     PGSHKAHELLHTAYQDKFKGSYKDVVKQ"
     gene            6731..7357
                     /locus_tag="CPT85_08350"
     CDS             6731..7357
                     /locus_tag="CPT85_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009251619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase"
                     /protein_id="DAB21096.1"
                     /translation="MNQEVLRDLSYGVYVVTTLCPESQKPAGCIANSIMQVTYDTIAV
                     SINHENFTNSCIKESGKFAISILGETVADNIIPVFGFQSARNVDKFVGIKTKNIDGLE
                     IIEDSVGYIICDVINRMDTSTHTIFLGKIKDGDIIKQGTPMTYAYYQTVKKGHSPKTA
                     PTYIEQPVSKTGYRCTVCGYIYEGDITQEPDTYVCPICKKPKDVFVKI"
     gene            7384..8463
                     /locus_tag="CPT85_08355"
     CDS             7384..8463
                     /locus_tag="CPT85_08355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011916443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="DAB21097.1"
                     /translation="MINNNDVLNIREIQERKEIEELSPYAAKSALSKGRAKEEEKCPL
                     RTEFQRDRDRIIHSKAFRRLKHKTQVFFSPTNDHFRTRMTHTLEVSQIARTIARALNL
                     NEDLAEAIALGHDLGHTPFGHSGEDILNEIMDAGFRHAEHSVRVATIIEDLNLTQETL
                     DGILHHSGSLKKESKAFTLEGKIVKLSDKIAYINHDIDDAMRAGIIKESDLPQDCIQY
                     FSLDRSERITKMVMDIVRNSMGKDHICMSEDAFYHIDKLRTWMFRNVYTNSIAKKEET
                     KVKGIVYGLFNHYEALLKQKMPNQNEEEIKRTVCDYISGMTDRYAIQKYEEIYIPQSL
                     QDVSNDDFLFTLAKINNLSVQLTVL"
     gene            complement(8492..9844)
                     /locus_tag="CPT85_08360"
     CDS             complement(8492..9844)
                     /locus_tag="CPT85_08360"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21098.1"
                     /translation="MFCVLYIAGMNTVNKLLEACGSNTALHYDKWTEQHRYRALNDGN
                     LKQWISGILPCELLERPLKKAVESILTLCECTTFYKKFPDNVVSPNYGDKWGRLANYI
                     EINNRAICEMHGSRCKNGIISSIKLLPAIPPSAKSWANCVILSQIWPNIYGDGYNKAP
                     WEENSIYGIKLGIGYSENIIDFDIADKISPEEQFKAFNDLAHFRGLKTGFRTIISEDQ
                     LKVSHPYKEDEIFRWHNPEHVELYIQEMVKLVNLGFEAIFVDSAKHIGGYDMQNYTGV
                     GALPDYHQMQYITDEIRRRSGCTTLSFVGEKSSDDFERYRMMGLNAGTAFVSVDDFDS
                     VKHWSNELKYSRDYAPGVEVSNDNTEGGTPYEVRLNRIRNALFGFEIASDKLPSFMQM
                     EDLFPLRYDTNTHHLMMCNPSYSTDGSAQSHWRELFTKDDGRYYNHQVGEIFAHALFL
                     "
     gene            complement(9869..10195)
                     /locus_tag="CPT85_08365"
     CDS             complement(9869..10195)
                     /locus_tag="CPT85_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008461433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QacE family quaternary ammonium compound efflux
                     SMR transporter"
                     /protein_id="DAB21099.1"
                     /translation="MAYLYLIIAIIAEIVATTIMKDTNGFTVLWPSVFTILGYVVAFY
                     MLSLCIQTIPTGIIYALWSGFGIIGIAVLGWIVHKQTLDLPAIAGIVLILLGVLVIKI
                     FSKSIA"
     gene            complement(10247..11611)
                     /locus_tag="CPT85_08370"
     CDS             complement(10247..11611)
                     /locus_tag="CPT85_08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019553342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="DAB21100.1"
                     /translation="MINDMTKGDPLKLLFCFSVPLLIGNIFQQLYNIADIVIVGRTLG
                     MNALAAVGAISPIFFFLMFVVVGLTNGFAVITGQRFGAKDTDGVRKSATVSTVLSTVF
                     TIVFSALLAIFMNTILAWMNVPKEIYKDAYLYILIVVGGLIVVNIYNLLASIVRALGD
                     SKTPLYFLIFASVLNIFLALLFILKFGWGVPGSAVAVVLSQGVSALLCIIYVKMKFPI
                     LHTNKEDWFFAFSPRSFSFALEHLKVGIPMSVQYSILGIGILIIQSVCNTFGPDVIAA
                     FTAALRIEQIATLPMISFGVALAAYTAQNFGAKNFSRIKEGVNKGSIINITLSIIMTL
                     LIHFWGSDIVGIFIGKGEKHIIDIARSYLWISTLFYFFLGQIFIFRNALQGMGEVILP
                     LSASIAELLVRSFAAIYLAVKFSYYGIFYAGPIAWVSASSIMAIGYYTNLLRIVKKAR
                     VKLR"
     gene            11756..12652
                     /locus_tag="CPT85_08375"
     CDS             11756..12652
                     /locus_tag="CPT85_08375"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21101.1"
                     /translation="MIVNFNFSKPVKGVKIANSMPKPINFKAGADTFEKNTKEKDIEL
                     TVYNPYVNTVFHIKTPVDLTKKQQIVITSKYSRFAGKKLVVDYDPQRYDYIFDKKSNR
                     REKTMILVGHDERKPNEISYHFMSRSLSKEYGYVHLSLHRDPKADLKESSFLDRELLI
                     NYPKHKIQGPRVIVEYLQNWEDSKKGGIGRLADKLAVKYCIENNIKPVIISNADRGSH
                     VAHYLRGKRFLPPEKDTSSYDYLAKNYGCTNLNKILAKLLKDSEKNEEKIDLGDLGMF
                     PMYMPEELAQKYVKELESEKKL"
     gene            12667..13326
                     /locus_tag="CPT85_08380"
     CDS             12667..13326
                     /locus_tag="CPT85_08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012059082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein"
                     /protein_id="DAB21102.1"
                     /translation="MERENKFIKQRNQKLGEKTVAAFQKRHFDAFYCETAQDALNKAL
                     ELIKKDDVIAWGGSMTIKEIGLVDYLESNGYKTINRDKAPSAEEKLKFAYDSFFADVF
                     LMSANAISSDGQMVNIDGLGNRVAALSFGPKTVIVIAGVNKVVKTLDEAYKRARNYAA
                     PVNLQRIASMNNNQTPCALTGNCADCISPDSICCQIVTTRLCRPAGRIKIILVNDELG
                     Y"
     gene            13608..15008
                     /locus_tag="CPT85_08385"
     CDS             13608..15008
                     /locus_tag="CPT85_08385"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21103.1"
                     /translation="MDLYSXESWSQDSPTPVINNSYCEFVPPERAQNFIIKAVGGGGG
                     GGAGFSELKLDALYPGESKTFDFIANNKYHIGXLIGAGGGGGGGNKERGGTRAHGGGS
                     GAAVSFDFTPTYNISYSISVGNAGTGGHGDDGKHSGGDGSNGGDTSFGGMVFAGGGTG
                     GMAIQYDGAGSACKTIKASLKCFNYGTNWQSHPECINNTGYGCGGAYKLSDPSGNLKI
                     TNVKSINGTDGTRDASGRTTGYYSAYIGEQLLQPTYSFPWPSRGESGNLASMKAGSIG
                     MGGYGGQGKNSSGTSGMGGYAAVKSDVLVAGRAGEAAQMVLYPATTLDGKIRIVIGKG
                     GKGGKNKYQYNNHTQTEPTDGEITKVGDLFNAPCGRAGENKVIFPSSTTASIAVGTDG
                     PVSGIENDETPSYGGRSLNGESASTSDAEIVTAFGGGGGGGGAMRSSDYSTASYSNVY
                     SGDGADGGNGKVIITW"
     assembly_gap    13623..13625
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    13835..13836
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(15048..15533)
                     /gene="nrdG"
                     /locus_tag="CPT85_08390"
     CDS             complement(15048..15533)
                     /gene="nrdG"
                     /locus_tag="CPT85_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016440367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="DAB21104.1"
                     /translation="MRYHNITKEDMLNGDGIRVVLWVAGCEHHCKNCQNPITWDKNGG
                     LPFDSKAEEELFEALDKPHIEGITFSGGDPLMPYNRQEVLRLIKKCKNLMPEKTIWLY
                     TGYKWEEIKDIEDIGLIDVIAEGEFIESLKDNNLHWVGSSNQRVINVKDSLKQNSIVL
                     H"
     gene            complement(15535..17796)
                     /gene="nrdD"
                     /locus_tag="CPT85_08395"
                     /pseudo
     CDS             complement(15535..17796)
                     /gene="nrdD"
                     /locus_tag="CPT85_08395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004613572.1"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
     assembly_gap    17059..17119
                     /estimated_length=61
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         5778 a         3398 c         3617 g         5222 t
ORIGIN      
        1 tagtgtaaaa ttttagagta taatttttta atggctaagc tgaaaacaaa atggatatgt
       61 caaaactgcg gttacgaaac ggcaaaatac ctgggtaaat gtcctgactg cggacaatgg
      121 aatactcttg tggaggaagt ttttgaatca atatctccat ctcaggctgc aaaaactgtt
      181 ctaaatgaaa caataccttg cctgataaac gatattgaaa tcgaccgttc tatccgtttt
      241 acaacaggaa tagaagaatt tgacagagtg cttggcggcg gtcttgtcca aggttctatt
      301 gttttgctgg ccggcgaccc ggggataggt aaatctacaa tacttttgca aacaggtaaa
      361 gctatttgta aagacggaag aacagctctt tatgtatctg cggaagaatc ggcttcacag
      421 gttaaattga gagcacaaag gctcggtgtg caatccaatt ctttgtatat atattcccaa
      481 actaattttg aagctataaa aagacagatt gatgaaataa agccgcaaat ccttattata
      541 gacagtattc aagctgttta tacagacagc gtcacaagct ccccggggag cgtttctcag
      601 ataagagaat gtacaaacat tcttatggat atagcaaaaa ataaaaatat tactgttgtt
      661 gtaatcggcc atgttacaaa agaaggtaat atagcaggac ctaaagtgct tgaacatatg
      721 gttgatacgg taatttattt tgagggggac aggtataaat catacagact tttaagatgt
      781 atgaaaaacc gttttggaac aaccaatgaa gtcggggtgt ttaatatgtg tgatgatgga
      841 ttgcacgaaa tatcaaaccc cagcgagttg tttttgaacg aacgcacaca aaacaatacc
      901 ccggggagtg ttataatcgc tacaaacgaa ggctctcgcc ctttgctcat agaaatacag
      961 gcacttgtcg gtacaacttc atacccttcg ccaaggcgtg tgtccaacgg tattgattac
     1021 aaccgccttt tgcaaattct tgcagtgcta gaaaaacgta taggtttaaa tctaagcaaa
     1081 caagacgttt atgtgaatgt aataggaggg cttgaaattg atgagccggc tgctgacctt
     1141 ggagttgcgc ttgctgttgc aacgtgcgca agagacgtct gcgtcagccc tgatacggtg
     1201 atagtcggtg aaattggcct ttccggagaa ataagagcaa ttaataatct tgataaacgt
     1261 ataaaagaat ccgaaaaact cgggtttaag aaaatcattg ttcctcaaac taatacgcta
     1321 aaaaaagaag agtttaaaaa cattaatatt gtacaggtaa aacgcctcat ggatgcgata
     1381 acagcgtgtg tttcaaaatc agataaaaca actgtttcat aaaaattcct ccaaatacat
     1441 gattcctaat atccctttat aagtagaatg ttaatatata ccatcacatg catgtatatg
     1501 acgacttatt aggggaaatc gttggatatc tgacagagat gagcgaagaa ttagagtaca
     1561 gttcttataa caaaattaaa aggcttacgg acgaggagct tgaggctttg tggcatgaat
     1621 atcttgccga taagacccaa aaagccctta gagataagct tattgttcaa tatatttatc
     1681 taaccagata tgttatcggc cgtgtaaaaa tgaatcttcc gcaaacgttt tctatagaag
     1741 acatcacaag ttttggcgtg gaaggactta tagatgcaat agaaaaatat acccctgata
     1801 aaggtgcaag gtttgaaact tacgccctta tgcgtattcg cggtacaatt attgacaaaa
     1861 ttcgttcaca ggactgggtt ccccgctcaa caagaaagaa aatcaaagaa ataaaactgg
     1921 ttgcagaaca gctaaaacaa tcgctcggca gagccgcaac aacaacagag cttgctgctg
     1981 caatgaatat ggaaaaagaa aaaatagagg cacttcttgc tgacgaaatg caggttactt
     2041 ctatttatga caaaaaaggt acttccgaag aaagcgttga agtaattgat acaattcagg
     2101 atgaaaactc caaaaaccct cttgagcagc ttgttgacaa agatgtcaaa catgaattgc
     2161 aaaatgcact caaacgtttg cccgagagag aaagaatgat aatggttctt tactatcacg
     2221 aaaacatgac ccttaaagaa atcggtgata ctataaatgt ttctgaatcc cgtgtgtgcc
     2281 agcttcatgc acaggctatt atgaagctta aaaacatttt aacaacacat cgttccgaca
     2341 gactcaaaca aagtatcgtc taaataaatg cttgaattat tagtgatttt tgagtaaaat
     2401 attgtttgta attgtgattt atgtcacgat attggtctaa taatcttgtg taaaggagaa
     2461 aacgtaaatg agcccacaga ctcaagccgg tcttgactac tcaaaagtcg atgaaatcct
     2521 gtcgtcttat gagtacaaaa agtcaaattt gattgctatt ttgcaaaaag tacaggaaga
     2581 gtttagatat cttcctactg atgtaatgac atatatagga acaaaaatag aagggttgtc
     2641 accggctacg gtgtatgggg ttgcgacatt ttatgcacaa ttcagtctgc aaccaaaagg
     2701 caaatacgaa gttaaggtat gtgacggtac tgcctgccac gttagaggct caatgcctgt
     2761 tttaaacgct attcatcagt gcttaaaact cgttgacggt aaatttacaa cagaagacgg
     2821 cctgttctct gtagaaacag tcagctgtct gggtgcgtgc ggtcttgctc cggttgtggt
     2881 tgttaacggt actgtatacc cgcaaatgac tgccgacgca ataaaaaccg taattgaaac
     2941 cataatgggc gaagaaaggg gcaactagat gactgcgaca ttaataaaca tcaaaggtga
     3001 acaggaaaaa gttaaagagc agattaaagc acagggttta agagtgctgg tttgtgccgg
     3061 cacaggctgt gttgctaacg gctcgctaaa ggttatagaa aaatttaaag aactcggcgt
     3121 taatgttcgt ccgatgactc atcaggataa agtaacaatc gtaccaaccg gctgccacgg
     3181 tttttgcgaa cagggtgtgc ttgttgtaat tccggattta gatgtgactt atgtaagagt
     3241 aaaacttgaa gacgttgaag aaatcgttga aagccatata aaagaaggca agccggttga
     3301 aagacttctt tatgttgacc ctaaaacaca agaacatgta ttcaaaaatg aagaaatcaa
     3361 tttctacgca aaacaaacaa gaacaactct tgcaaactgc ggtgaaataa atgccgaatc
     3421 tcttgatgaa gcacttgctg ttggtgctta tgaagcattg cacaaagtcc ttgaaaaagg
     3481 taatccggat tgggttattg aagaaattac aaaatcagga ctgcgcggca gaggcggcgg
     3541 cggtttccct acaggtatga agtggaaatt cactgctgca aacaaaggcg gcaaaagtta
     3601 tgttgtttgt aacggcgatg aaggcgaccc gggcgcgttc atggacagaa gtgttatgga
     3661 aggcgacccg cacaaattac tggaaggtat ggcaattgcc ggctatgcaa ttggtgcaga
     3721 tgaggcttat atctatgtaa gagcagaata ccctcttgca atccaccgtt tgagagtggc
     3781 aattaaagaa gcagaagaaa gaggtttcct gggcaaaaat attatgggtt ctgatttcaa
     3841 ttttgaaatc catattaaag agggtgcagg cgcatttgtt tgcggtgaag aaacagctct
     3901 tatcgcttct attgaaggcg aaagaggtat gccaagaccg aaaccgccgt ttcctgcaaa
     3961 caaaggtttg ttcggccgtc ctactttgat taacaacgta gaaacccttg caaacgttgc
     4021 tccgattatc ctgaaaggtg cggactggtt tagctctatg ggtactgaaa aatcaaaagg
     4081 cacaaaaact tttgctttga caggtgaggt aaacaatacc ggccttattg aagtaccaat
     4141 gggtacaact ttaagagaaa tcgtatttga cataggcggc ggaatccgcg gaggtaagaa
     4201 attcaaagcc gtacaaatcg gtggcccgtc cggcggttgt ttgacagaag aacaccttga
     4261 cctacctatg gattatgaca accttattgc agcaggcgca atggtcggct caggcggtct
     4321 tgttgtaatg aacgaagaca cctgtattgt tgaagttgca aggttcttta tgaactttac
     4381 acaaaacgaa tcctgcggaa agtgtgttcc ctgccgcgaa ggcacaaaaa acatgttgaa
     4441 aatcttagaa agaattgtta aaggcaaagg cgagatgaaa gatattgaaa ctctcgaaga
     4501 gcttgctgtt gctgttaaag acggttcgct ttgcgggctt ggaaaaaccg ctccgaaccc
     4561 tgttctttca acgttgaaat attttaaaga tgagtatatc gctcacatca aggataagaa
     4621 atgtcctgcg ggcgtttgcg aagctatgaa aattattaca attgatccgg agctttgcaa
     4681 aggttgtaca aaatgtgcaa gaacctgccc tgttggcgct attgaaggaa cggtaaagaa
     4741 tccgcaccac attgatcagt caaaatgtat aaaatgcggc gcctgcttca attcttgccc
     4801 gttcaaagcg attaaacaaa actaaaagag gaaaaaacaa tgagcgataa aaaaacatta
     4861 attattaacg gaaaagaagt cgagtttaca gacgatccca accttcttga agtaatcaga
     4921 aaagcgggct ttaacgtgcc gacattttgc tatcgacctg accttacaca gtacggtgct
     4981 tgcagaatgt gtgttgtaga ggttgaatac cctaacggaa gaaccttaat caactcttct
     5041 tgcacaatgc cgcccgaggc aaacatcaag gtaaaaacaa acactgaacg cacacgccgt
     5101 atcagaaaaa ccgtgttgga actgcttctt gcaaaccacg acagagaatg cacaacctgt
     5161 gataaatcag gaaaatgtga actccagcag tatgcagaag aatacggaat aaaagacgta
     5221 tcaaaatacg tacagcttca aaaagacaga ttccagccga ttgacgactc aaacccgtca
     5281 cttgtaagag acccgaacaa atgtatcctt tgcggcgctt gtgttagagc ttgtgctgag
     5341 tttcatggcc acgctgtttt aggttttgca aacagaggtt caaaaacagt tgttcaacct
     5401 atggcaggta aatctcttgc gagcgttgac tgcgtatttt gcggccagtg tcaggcagta
     5461 tgtcctacag gtgcattgac tatcaaaaac gaagttaacc ctgtatggag cttaatcact
     5521 gaccctgaca caaaagtggt tgctcaaatt gcaccgtcag tacgtgttgc cataggtgaa
     5581 gaattcggac ttgaaccggg tgaaaactca attaaactta tcaacgctgc gttgaaggaa
     5641 atcggatttg accttgtgtt tgatacaaac ttctctgctg accttaccat tatggaagag
     5701 gcacacgagt ttgttgaacg cgtaagcaaa ggcgaaaacc ttccgttgtt cacctcttgc
     5761 tgtcctgcgt gggtaagata tttggaaaca cagcaccctg atatgttaca ccacttatca
     5821 agctgtaaat ctcctcaggg tatgctttct cctgtgttga tggagcttgt tcctcaatac
     5881 tttgatggct ttacaaaaga aaatatgaaa atagtttcca ttatgccctg tactgccaaa
     5941 aaggtagagg caaaacgcgc tcaattgaga aaagacggca agtttgaaac agattttgtt
     6001 cttacaactc aagagcttgc caaaatgatt aaaagcgccg gtattgattt taaatcactt
     6061 gaaccagcag aaggcgacag cccgtttgct caatactccg gtgccggtac aatctttggc
     6121 gcttcaggcg gtgtagcgga agctgccgta agaacagcct atgaatttgt cacaggcgaa
     6181 cctttgtcag accttgatat caaaggtatg agaggtgttg acaaaaatca tagatgcaaa
     6241 gatgttgagc tggatatcaa aggcacaaaa gtaaaagtaa gagttgtttc aacattaaaa
     6301 gaagcagaaa aatctcttca agaaatcaaa aatggtacag cagacttcca tatgctggaa
     6361 gttatggcgt gtcccggtgg atgtatcaac ggaggcggcc agccattgag ctttaatgat
     6421 tcaaaaatca aagaaagaag agcacaaggg ctgtataaag aagactccga gcttacttac
     6481 agacgctcca atgacaaccc tgatatcaaa aagctttaca aagaatacct tgaaaaccca
     6541 ggctcgcaca aagcgcacga gcttttgcac acagcttatc aggacaagtt taaaggctct
     6601 tacaaagacg ttgtaaagca gtaacagtca attaaaatta aaaaatcctt gtttttagca
     6661 tcaacaaaaa caaggatttt tttgtgccgt aatgctataa tgttgatggc agaaaatata
     6721 tgaggcgttt atgaatcaag aagtcctgag agatttatcc tatggtgttt atgttgtaac
     6781 aactctttgt ccggagtcgc aaaagcccgc aggctgcata gcaaacagta ttatgcaggt
     6841 aacctatgac accattgcgg tgagcataaa ccacgaaaat tttacaaaca gctgtattaa
     6901 agaatcgggt aaatttgcta tttcaatatt aggtgaaacc gttgcagaca acataatacc
     6961 cgtgttcggc tttcagtctg caagaaatgt ggataagttt gtcgggataa aaacaaaaaa
     7021 catagatgga ctcgaaatta tcgaagactc agtagggtac atcatttgtg atgtaataaa
     7081 ccgtatggat acctctacac acacaatttt tcttggcaaa ataaaagacg gagatatcat
     7141 aaaacagggt actccaatga catatgccta ttatcaaaca gtaaaaaaag gccacagccc
     7201 caaaaccgca ccaacatata tagaacaacc cgtatctaaa acaggctata ggtgcactgt
     7261 gtgcggatat atttatgaag gtgatatcac gcaggagcct gacacatacg tttgtccgat
     7321 ttgcaaaaag cctaaggacg tatttgtaaa aatataaata tttttcgtga taaaatatta
     7381 cctatgataa ataataatga tgttttaaat ataagagaaa ttcaagaacg aaaagagatt
     7441 gaagaactca gcccgtatgc agccaaaagc gcattgtcaa aaggcagagc aaaagaagaa
     7501 gaaaaatgcc cgttaagaac agagtttcaa cgagaccgtg acaggattat ccattccaag
     7561 gcttttcgcc gtctcaaaca caaaacacag gtgtttttct ctccgacaaa cgaccatttc
     7621 agaacacgaa tgacccacac tcttgaagtt tctcaaatcg caagaacaat cgcccgtgcg
     7681 ctgaacctta acgaagattt ggctgaggct attgctctgg gtcacgattt aggtcacact
     7741 ccatttggcc atagcggaga agatatctta aacgaaataa tggatgcagg ttttcgtcat
     7801 gcagagcatt ctgtcagggt tgcaacaata attgaagatt taaacctcac tcaagaaacg
     7861 ctcgacggta tattgcacca ttcaggttcg ttgaaaaaag aaagcaaggc ttttactctg
     7921 gaaggtaaaa tagtgaagct ttcagacaag atagcttaca taaaccacga tattgatgac
     7981 gcaatgagag caggtataat caaagaatct gacctgccgc aggattgtat acaatatttt
     8041 tcgctggaca gaagcgagcg tatcacaaaa atggttatgg atattgtccg caactctatg
     8101 ggcaaagacc atatttgtat gtcagaagat gctttttatc atattgataa attgagaacg
     8161 tggatgttta gaaacgtata cacaaactcc attgccaaaa aagaagaaac aaaggttaaa
     8221 ggtattgttt acgggctttt caatcattat gaagcacttt taaaacaaaa aatgcctaat
     8281 caaaacgaag aagaaatcaa acgcactgtt tgcgattaca tttcaggcat gacagacaga
     8341 tatgcaatcc aaaaatacga ggaaatctac attccacagt cattgcagga tgtttcaaac
     8401 gatgattttc tgtttactct tgcaaaaata aataatttga gcgtacagct gacagtattg
     8461 taggcgtaca attaaaatat atttgtcaga gctataaaaa cagagcgtgt gcaaaaattt
     8521 cgccgacctg atgattgtaa tagcggccgt catctttcgt gaataattca cgccaatggc
     8581 tttgcgcact tccgtctgtt gagtatgacg ggttgcacat cattagatgg tgggtgtttg
     8641 tgtcatatct taatggaaac aggtcttcca tctgcataaa acttggcagt ttgtcactag
     8701 ctatttcaaa tccgaataaa gcgtttctta tcctgtttaa tcttacttca taaggggttc
     8761 cgccttctgt attgtcgtta gaaacttcaa cacctggagc atagtctctt gagtatttca
     8821 attcatttga ccagtgtttt acagaatcaa agtcgtcgac actgacaaaa gcggtacctg
     8881 catttagccc catcattctg taacgttcaa agtcatcaga gcttttttct ccgacaaaac
     8941 tcaacgttgt acaacccgag cggcgtctta tttcatctgt tatgtattgc atctgatgat
     9001 aatccggcag agctcctact cctgtgtagt tttgcatgtc atatccgcct atatgtttgg
     9061 cagaatctac aaatatagct tcaaatccaa gatttacgag tttgaccatc tcttgaatat
     9121 aaagttcaac atgctccggg ttatgccatc taaagatttc atcttctttg taaggatgag
     9181 aaacctttaa ctggtcttct gaaattatgg ttctaaaacc tgttttcaat cccctgaaat
     9241 gggcaagatc attaaatgct ttgaattgtt cttccggcga tattttatcg gcaatgtcaa
     9301 agtcaatgat attttcacta tagcctatgc caagcttgat accgtaaatt gaattttctt
     9361 cccagggtgc tttattgtat ccgtctccgt aaatatttgg ccaaatttga gacagaatta
     9421 cacaattggc ccagcttttt gcagatggag gaatagccgg caaaagtttt atagagctta
     9481 ttattccgtt tttgcagcgg ctgccgtgca tttcgcatat tgcacggttg ttgatttcaa
     9541 tgtaattggc gagtctgccc catttgtctc catagtttgg agaaactaca ttgtcaggga
     9601 attttttgta aaatgtagtg cattcacaca aagtaaggat agattccaca gcttttttta
     9661 atggccgttc gagcaattcg caaggaagga ttcctgaaat ccattgtttt aaattcccgt
     9721 cattcaatgc cctgtatcta tgctgttctg tccatttatc ataatgcaaa gcagtattgc
     9781 tgccgcatgc ttccaaaagt ttattaactg tattcatacc ggcaatatac aaaacacaaa
     9841 acaataaaac attgtgccaa aaggttattt atgcaatcga tttggagaat atttttatta
     9901 ccagaacgcc taaaagtatc agcacaattc cggcgattgc gggcaagtct aacgtttgtt
     9961 tgtgtacaat ccagcccaaa accgcaattc ctattatgcc aaaacctgac cacaatgcat
    10021 atataatgcc ggttggaatt gtttgtatac acaaactaag catataaaaa gcaactacat
    10081 atcccaaaat tgtaaatacg gaaggccaca agacagtaaa gccgttagtg tctttcataa
    10141 tcgttgttgc aactatttct gctattatag caattatcaa atataagtat gccatttttc
    10201 aggttccatt ttgttgaatc taaaacatga tatcaaaaaa actgatttaa cggagtttta
    10261 ctcttgcttt tttcacaata cgcaaaaggt ttgtgtaata acctattgcc ataatagaag
    10321 atgcactcac ccaggcaatc gggccggcat agaaaatccc gtagtaactg aattttacag
    10381 ccagataaat tgctgcaaat gaacggacta aaagctctgc tatacttgcg cttaaaggta
    10441 aaataacctc tcccataccc tgcagtgcat ttctgaatat aaatatttgc ccgaggaaaa
    10501 agtaaaacaa tgtgctaatc cacaggtagc ttctggctat gtcaattata tgtttttcac
    10561 ctttgccaat aaaaattccg acaatatcac ttccccagaa gtgtatgagt aaagtcatta
    10621 taatactgag tgtaatattg attatcgagc ctttgttaac accttcttta atccttgaga
    10681 agttttttgc accaaaattt tgtgctgtat atgctgccag agcaacacca aaagatatca
    10741 taggcagtgt agctatttgt tcaatacgca aagctgccgt gaatgcagct attacatcag
    10801 ggccgaatgt attgcagaca ctttgtataa taagtatacc tatacccagt attgaatatt
    10861 gcacagacat tggtatgccg acttttaaat gttccagtgc aaatgaaaag cttctgggtg
    10921 aaaatgcaaa aaaccagtcc tctttgtttg tatgcagtat tggaaacttc atttttacat
    10981 atattatgca taaaagagca gatactccct gcgacagtac aaccgctacc gcagaaccgg
    11041 gcactcccca gccgaatttt aaaataaata acagtgccaa aaatatgttt aaaacagaag
    11101 caaatattaa aaaatataaa ggtgttttgc tgtcgccaag ggctcttact atactggcaa
    11161 gcagattgta tatgttaaca acaatcaatc ctcccacaac tatcaagata taaagatatg
    11221 catctttgta aatttctttt ggcacgttca tccaagccag tattgtgttc ataaatattg
    11281 ccagcagtgc tgagaacaca attgtaaaca cagtgctcaa aacagtagaa acagtggctg
    11341 attttcttac gccgtctgtg tctttggcac cgaatctttg acctgtaatt acggcaaatc
    11401 cgtttgtgag cccgacaaca acaaacataa ggaaaaagaa aatcggtgat attgctccga
    11461 ctgcggcaag agcgttcata ccaagcgtac ggccgactat gacaatatct gctatgttat
    11521 agagctgctg gaatatatta ccgattaaca aaggtaccga aaaacaaaat aatagcttta
    11581 gcgggtcacc ttttgtcatg tcgtttatca tagtaaaact ctctttgaaa aaaccttatt
    11641 aataatgtta ttttactata cacatattat aaaaaaatat tatacgtatg taatacatct
    11701 tgtttagtgg caaattttta tcttcacaag ttttgtctaa tacgaaggta aaaatatgat
    11761 agtaaacttt aatttttcaa aacctgttaa aggtgtaaaa atagccaaca gtatgccaaa
    11821 accaatcaat tttaaggccg gagctgatac ttttgaaaaa aatactaaag aaaaagatat
    11881 agagcttact gtatacaatc catacgtgaa tactgttttt catataaaaa cacctgttga
    11941 tttgacaaaa aagcaacaaa tagtgattac ttcaaagtat tctcgttttg cagggaaaaa
    12001 acttgttgtt gattatgacc ctcaaagata tgactacatc tttgataaaa aaagcaatcg
    12061 ccgtgaaaaa acaatgattc ttgtcggtca tgatgaaaga aaacccaatg aaatctctta
    12121 tcattttatg tcacgaagtt taagtaaaga atacggatat gttcatctga gccttcatcg
    12181 tgaccctaag gctgatttaa aagaatcttc ttttttggat agagagctgt tgataaatta
    12241 tccaaagcac aaaattcaag ggccaagagt aattgttgaa tatcttcaaa actgggaaga
    12301 ttccaaaaaa ggaggcattg gcaggcttgc agataaactg gccgtaaaat attgtattga
    12361 aaataatatt aaacctgtaa taatttcaaa tgcagacaga gggtctcatg ttgcacatta
    12421 tttaagagga aaacgtttcc tcccgccaga aaaagacaca tcttcttatg actatttggc
    12481 aaaaaattat ggctgtacaa atttaaataa aatacttgca aaattactaa aagattcgga
    12541 aaaaaacgaa gaaaaaatag accttggaga tttggggatg tttcctatgt atatgccgga
    12601 agaacttgca caaaagtatg taaaagagtt agaatctgaa aagaaattat aaaaacacgg
    12661 tggattatgg aaagagaaaa taaatttatt aaacaacgca accaaaaatt gggtgaaaaa
    12721 actgttgctg cattccaaaa aagacatttt gacgcatttt attgcgagac agctcaagat
    12781 gcactgaaca aagcacttga acttataaaa aaagatgacg tgatagcctg gggcggctca
    12841 atgaccataa aagaaatagg ccttgttgat tatcttgaaa gcaacggtta taaaacaatc
    12901 aacagagata aagccccatc tgcagaagaa aaactgaaat tcgcatacga cagttttttt
    12961 gctgatgtgt ttttaatgag cgcaaacgca atcagctcgg acggacaaat ggttaatata
    13021 gacgggcttg gaaacagagt tgcagcactg tcattcggac caaagacagt tattgttatt
    13081 gccggtgtga ataaggttgt aaaaactttg gatgaagctt acaaaagagc cagaaactat
    13141 gccgcacctg ttaatcttca aagaattgca tcaatgaaca ataatcaaac tccttgtgct
    13201 ttaacaggaa actgtgcaga ttgcataagc cctgattcaa tctgttgtca aattgtcaca
    13261 acacgattat gtcgccctgc cggaagaatt aagattatac tggtaaatga tgagctgggt
    13321 tattaaatct gctatatttt tataaaaaat ttcgcgccag ttgcaatgtc atactaaaag
    13381 atatataata tatacataag tactgtattt aataagctat tatcttatta atgctgatga
    13441 atatttaatt caggagtttg tatgaaaaag attacactgc ctaaattttg tgcattttca
    13501 cttgcagaag cattaatcac tctacttatt gtatgtttga ttacactagc ttctgtgccg
    13561 attttgacaa agaaaaaaag aacgctggag caaattccac acggcgaatg gacttgtatt
    13621 ctnnngaatc ctggtcacag gattctccaa cgcctgttat taacaactca tattgtgaat
    13681 ttgtacctcc cgaaagagct caaaacttta ttattaaagc tgttggcggc ggcggaggcg
    13741 gtggtgccgg ctttagtgag ttgaagctgg atgcattata tcccggagaa agcaagacat
    13801 ttgattttat tgcaaataac aaatatcata ttggnncgtt aatcggcgcc ggaggcggcg
    13861 gtggcggagg aaataaagaa agaggcggta cccgtgcaca tggtggcgga agcggtgctg
    13921 cggtaagttt tgattttaca ccaacatata atatctcata ttctatcagc gttggtaacg
    13981 ccggaaccgg tggtcatggt gatgacggta aacacagcgg tggcgatggt agtaacggag
    14041 gcgacactag ctttggcgga atggtctttg caggtggcgg tacaggcggt atggctattc
    14101 aatatgatgg agccggttct gcctgtaaaa caataaaagc ctctctgaaa tgttttaatt
    14161 atggtacaaa ctggcaaagt catcctgaat gtattaataa taccggctat ggttgcggtg
    14221 gtgcgtataa gttgtctgac ccgtcgggta atttgaaaat tactaatgta aaaagcataa
    14281 atggtactga cggaacaaga gatgcctccg gtcgaacaac aggatactac agtgcttata
    14341 ttggtgagca gttattacag ccaacctatt ctttcccgtg gccatcaaga ggtgaaagcg
    14401 gaaaccttgc atctatgaaa gccggctcaa ttggaatggg cggatatggc ggacagggca
    14461 aaaatagcag cggtacttca ggcatgggcg gttatgctgc tgtaaaaagt gatgttttgg
    14521 ttgccggacg tgcaggcgaa gctgcacaaa tggtgcttta ccctgctaca acgctcgatg
    14581 gtaaaatccg tatagttatt ggcaaaggcg gcaagggtgg taaaaataaa tatcaatata
    14641 ataatcatac acaaactgaa ccaactgacg gagaaattac aaaagtcggt gacttgttca
    14701 atgctccttg cggacgtgca ggcgaaaata aagtgatttt cccgtcttca acaacagctt
    14761 caatcgctgt aggaactgac ggacctgttt caggtataga aaatgatgaa actccatctt
    14821 acggtggcag aagccttaat ggtgaatcag catcaacatc tgatgcagaa attgttaccg
    14881 catttggcgg tggcggaggt ggcggcggtg ccatgcgaag ctccgattac agtaccgctt
    14941 cttacagcaa tgtatactcc ggtgacggtg ctgatggagg aaacggaaaa gttattataa
    15001 cctggtaaag attaaagagc tcttatgaaa aacataagag ctctttttta atgaagtact
    15061 atagaatttt gttttaaaga gtcttttacg ttaatcactc tctggttgga actgcctacc
    15121 cagtgcaaat tgttgtcctt aaggctttct ataaattcac cttcggcaat gacgtctata
    15181 agcccaatat cttctatatc tttgatttct tcccatttgt atccggtgta gagccagata
    15241 gttttttccg gcattaaatt tttacatttt tttatgagcc ttaaaacttc ttgcctgtta
    15301 tatggcatca aagggtctcc tccgctaaag gtaatccctt caatatgggg cttgtccaat
    15361 gcttcaaaca gctcttcttc tgctttgctg tcaaaaggca ggcctccgtt tttgtcccag
    15421 gtaattggat tttggcagtt tttgcaatga tgttcacatc ctgcaaccca cagtacaacc
    15481 ctaattccat cgccatttag catgtcttct tttgtaatat tatggtatct catattacat
    15541 gctcactctg tctttgattt cttccatttt tgcctcatta aggcgggtat caccttttac
    15601 tcttgagtat gaaagatatc cgttcattct atctattttt gtaaggtttt tacttccgca
    15661 tttagggcag atgtccattg caagctcctg atgcccgcaa tcatcacaat atgaaagtga
    15721 tagatttacc ccttcataaa aacctttatc cattgctctt ttaacaaggg tttcaattgc
    15781 ttttgtattg tatgaaacag gatattttac atactgaatt ttgcctccgt tgagcaggtt
    15841 ccagaatcta ccctcaaggt cctgtttttc aatcgggcct atgtcttctg aaacatggca
    15901 gtgaaaactg ttggagacat aacctctgtc agatacatta ctgatttttc catatttttt
    15961 acggaattgt tttatctgaa ggccacacag attctcagcc ggtgtgccgt agattgcata
    16021 gaggttcccg tcttgttctt tgaattcgtt tacttttttg tttatatatt ccattacctc
    16081 aagagcaaag gctccgtctt caacaagtga ttttttgttg tgcagctgtt gaagctcatt
    16141 tagtgctgta ataccaaaag aagctgttgc agattttaaa agcggtttta ttttgtcgtg
    16201 gattccaaga tgtccgccgt aaaaaccacc ttcgcaaaat gccagagggt ttattgaagc
    16261 tctcatttct ccaagatatt cataggttct tacatgcagc tgtcttatca tttccatgta
    16321 gtaatcaagc acttcgtaaa aatctttgcc ttctttttgt gcttttgcat atatcattgg
    16381 taaatgcagg cttattgcac caatattaaa ccttcccaca aaaattggtt tgtcattttc
    16441 atcctcgggt tttattccac ctttttcgta ccagggagaa agaaaagccc ggcagcccat
    16501 aggcgagatt actcgtttgt actttttgta catactagca acatagccgt ctccgcttaa
    16561 agagagccag tccggataca ttgctttttt agaacattca atacctgcat taaagagctc
    16621 ttccagctct ttgccttttc cgtggagttg ttcgtcataa aggaaaacaa ctttggggaa
    16681 caatacaggc tttttgcttc cttttttgcc ctgaccttct tttcttactt ccagcatcat
    16741 caaggaagcc attttggcaa atctgtcagt accaagtccc attgtcattg taataaacgg
    16801 ataatctccg cgactagagg ctacagtgtt gaatttgtat tcccacccct ggaacccgtc
    16861 gtgcaggtct ttttttacat cgtttaaagc ttctttttcg gctttttctt tttcaacacc
    16921 aaggtttatg tatttgttaa aactgatttc aaatgttttt tcagcatacg gagcaagaat
    16981 tttatccact tcgggaacag taaaaccgcc atattgctga cttgcggcag ccattacaat
    17041 atctccgatg acatcaaann nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
    17101 nnnnnnnnnn nnnnnnnnna catcaaaaag gcagcagttc atagtgtctc ttcttgctga
    17161 catatcgtgg atgtatatgt atccgtcacg aatagcttga agctcaggca ctgttaaaaa
    17221 gaattttttg taaagctctt tattaagctg gttaaaaata agtgaacgtt ttgttgaaac
    17281 aagtgcagaa tcagcatttg agttttcttt atcgccaata tacatgattt tttgactttc
    17341 ttgataaacc ttatcaagca tatcaacaaa gtcaatttta tagtttctgt agtttctata
    17401 gctttttgca acttttggat ttattgcttc aagcgcattt tcggcaatac agtgcatctt
    17461 gaaaatttca atttcctgtt catttgcttg caaaacactt ttatcaacaa aatcttttat
    17521 gctttgaatt tctttttcat taaattcaat gagcattctt gcagcagatt ttttaactgc
    17581 ggaaacgact ttgtttacgt cataatcctc ttttgttccg tcttttttta taatttttat
    17641 ccggttaaga ccgtattttt tttctacatc agaatgtttt aatacaaagt tgttaggctc
    17701 aagtgatttt ggctttgtaa caacagcgcc ttcaattgtg gaagatgttt ttgttgtgtc
    17761 tatattgatt acatttgtgt tgtcgttttt gttcattaaa aatctccttt ttttacaaaa
    17821 aggcagaaat cggccagcaa aattatttaa actgttaatt tttctcccaa attcctgtct
    17881 cgaggtatgt gacaattgaa gcattccggc tattacggct gcggaccagc gagtgatttt
    17941 cgcacttctt tccttcaatt cctttttatt attttatcaa aaataataag tattttcaaa
    18001 tgctaaaaag tttagtaaat catagatgat gtaattgaaa ttaactattt ttcaagagaa
    18061 tacaattctt gattgattta t
//
LOCUS       DABS01000185            9944 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_6983, whole genome shotgun sequence.
ACCESSION   DABS01000185 DABS01000000
VERSION     DABS01000185.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 9944)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 9944)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9944
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..412)
                     /locus_tag="CPT85_08400"
     CDS             complement(<1..412)
                     /locus_tag="CPT85_08400"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21061.1"
                     /translation="MNENNPDIIDRYFKSMEKCFSIACQKVIFEPSSKKEWFFENDKW
                     CYFEFYCDDSYYRLVSSEQKDFSAECIIKDMSYEIKMLLGFVRLRGVVTIEKQMFSDY
                     VTKYEKEHSLTTDLTIEKFNFDLKQREEKELEKTD"
     gene            531..950
                     /locus_tag="CPT85_08405"
     CDS             531..950
                     /locus_tag="CPT85_08405"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21062.1"
                     /translation="MDKKTLRDNEDFINYLERINFQKHLNKLAKKLKDKTIIIYGAGA
                     FFNALNEKYDLSVLNIIAIADRKFINHEQGLEFAGYKACAPDEITSLKPDYVLVSMLY
                     FVSVIEDLEETCLRSSKIKIKPLINKPFVEVWKEIWS"
     gene            952..1266
                     /locus_tag="CPT85_08410"
     CDS             952..1266
                     /locus_tag="CPT85_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004617864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21063.1"
                     /translation="MSENSLISIIIPVYNARDYIAKCLDSLICQSYKNIEIICVDDCS
                     TDQSLNIINDYAKKDSRLKIFSTGQNSGPXRQEIWGWIIHKAILLCFVIMMIPIHKIC
                     AS"
     assembly_gap    1170..1171
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1185..1931
                     /locus_tag="CPT85_08415"
     CDS             1185..1931
                     /locus_tag="CPT85_08415"
                     /inference="COORDINATES: protein motif:HMM:PF00535.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21064.1"
                     /translation="MGLDNSQGDFIMFCDNDDTYSQNMCELMLNAAKEYDDELVTCKS
                     NIENSSLDKELANYINSNPEGNIKLNDCIKHSINVLLWNKIYRKSIIDKYDIRFPDGV
                     SAEDDAFIMQYVSVISKYCGLKLYLYNHLFRTTSYTNTIGRAKAAEKKFDKIKIIKNM
                     YDFLIKHDIFDSQEEYFKNRTKAELIYMFSYNKEPGDKETIIRLYNDFVKNAQHLDYK
                     KYNYHCFYKRLYKRLNPFRLCLLINKCYWF"
     gene            1953..3119
                     /locus_tag="CPT85_08420"
                     /pseudo
     CDS             1953..3119
                     /locus_tag="CPT85_08420"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3037..3222
                     /locus_tag="CPT85_08425"
                     /pseudo
     CDS             3037..3222
                     /locus_tag="CPT85_08425"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    3044..3090
                     /estimated_length=47
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    3286..3308
                     /estimated_length=23
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3321..4073
                     /locus_tag="CPT85_08430"
     CDS             3321..4073
                     /locus_tag="CPT85_08430"
                     /inference="COORDINATES: protein motif:HMM:PF01370.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate sugar epimerase"
                     /protein_id="DAB21065.1"
                     /translation="MNHDYIDDRAQKFDTDIFSQNKNYFDFFNKPDVLIHLACKDVPV
                     HNSFYHIESISKNFDFIKNLVDNGLKQVITVGSMHDIGYYEGEVKEDVEPHPMSFYGI
                     SKDTLRRLLEVYTKDKDVVYQHLRFFYTYGDDMHSSGSVFSKILQMAAEGKETFPFTD
                     GKNKFDYIEINELAKQIAAVAMQKEVKGIINCCSGKPVSIKEQVEFFIKLHNLSIKPD
                     FGKYPSRPYDSPCIYGDNTKIRKIMEQKSAKH"
     gene            complement(4063..5571)
                     /locus_tag="CPT85_08435"
     CDS             complement(4063..5571)
                     /locus_tag="CPT85_08435"
                     /inference="COORDINATES: protein motif:HMM:TIGR01444"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21066.1"
                     /translation="MINKKLYNGLEKYRKNFAESNLNTVSIVCFDYEIETAVKVFQDK
                     FGAKIERILISPYFPRKNDISEYENIPVESLEYNYDKNNLAVYIDFYEMVDNHWIATM
                     NMIAQNRKGLYYFFTPADYKNGCMLTFPPLKSFYEAHKQEIDKVYSLLSSKKSKKVFL
                     QRLKSLTEGDAGYLAYNGEMDYFPQELMPTVKKGAVIVDAGISSSIFELEKYTELIGE
                     KGKIFAFEASPIECEKAKNIIATKPLLKNIELLCLGLWNKHEKLQMAVGNGGSSVLYP
                     INGDAVECELVALDDFVKDNKINKLDYIKMDIESAEPNALRGAQKTIKKFKPDMAICI
                     YHAPSHLWDIALYLNSLNIGYNFYIHHHSSTCCETVLYAVRPVFIKRVFNIVRNFLYD
                     IWHLRIGKTIEKGINSIELKNKRVVVYGAGKHFESLLQNGVFKNINVVALSDRKFEKT
                     SEYKGYTAIPPNEILNYKPDIIYIAMQEGMVAHAFLTEMFKEKMQKIKFINV"
     gene            5845..8484
                     /locus_tag="CPT85_08440"
                     /pseudo
     CDS             5845..8484
                     /locus_tag="CPT85_08440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002758782.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
     assembly_gap    8147..8148
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    8356..8357
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(8572..9630)
                     /locus_tag="CPT85_08445"
     CDS             complement(8572..9630)
                     /locus_tag="CPT85_08445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019376155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="DAB21067.1"
                     /translation="MANVTLKNVVKKYDTKTIINDVSLEIQDKEFLVLVGSSGCGKST
                     ILRMIAGLEDITDGQIFIGDKCVNNVHPKDRDIAFVFQSYALYPHMTVYENIAFPLKM
                     RNLKKDEIDKKVKEAAEILDLTEYLNRKPKQLSGGQRQRVALGRAIVRNPKVFLMDEP
                     LSNLDSKLRVQMRSEIKKLHEKLQTTFIYVTHDQTEALTMGDRIVVLDKGIIQQAGKP
                     EEIYYNPANTFVGGFLGSPSMNFIPCKVQDGTVKLNNEYIVYLSEEQKTIIKDRTEVL
                     IGIRPEKMDVINSNYNFTVPVDISEMLGSEKIVYFNVNGAKCSAKVDTQKHFDKEITL
                     QFNTNDFLFFDVETGKRI"
     gene            complement(9648..>9944)
                     /locus_tag="CPT85_08450"
     CDS             complement(9648..>9944)
                     /locus_tag="CPT85_08450"
                     /inference="COORDINATES: protein motif:HMM:PF02518.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21068.1"
                     /translation="EFLEIAGFSVNANLPEKAYMMIKIIDTGMGIPESDLNNIFDPYA
                     NIDKYIAKKAVSKSLEMGIIYNLVRLLKGKIWVESESMKGCSYTFIIPVERISL"
BASE COUNT         3206 a         1711 c         1752 g         3199 t
ORIGIN      
        1 tatctgtttt ttcaagctct ttttcttctc tttgtttcaa atcaaagttg aatttttcta
       61 tagttaaatc agtagttaaa gaatgttctt tttcgtattt tgttacatag tctgaaaaca
      121 tttgtttttc tatggtaacc acacctctta gtctgacaaa accaagcagc atttttatct
      181 cgtagctcat gtctttgatt atgcattcgg cagaaaaatc tttttgctct gaagaaacca
      241 ggcgataata actgtcatcg caataaaact caaaataaca ccatttgtca ttctcaaaaa
      301 accattcttt ttttgaagac ggttcaaaaa ttactttttg acaggcaata gaaaagcatt
      361 tttccattga tttaaaatat ctgtcgataa tgtccggatt attttcgttc atttttttat
      421 tttataacat gaatttcaga tttaaaactg ctatatggag taaagttcgt tgactaaagt
      481 attactaaat gctagcatta atgtaatata tagtgttgga tgagagaaag atggataaaa
      541 agactttgcg ggataatgag gattttatta actatcttga gcgtataaat tttcaaaaac
      601 atcttaataa acttgcaaaa aaactcaaag ataaaaccat aataatatat ggcgcaggtg
      661 ctttctttaa tgcgctcaat gaaaaatatg atttatccgt gttgaatata attgcaattg
      721 cagacagaaa atttattaac cacgaacaag ggctcgaatt tgccggctat aaggcttgtg
      781 cacctgatga aattacttct ttaaaacctg attatgtact tgtcagtatg ctttattttg
      841 tcagtgttat cgaggatttg gaagagactt gccttcgaag ttcaaaaata aaaattaaac
      901 ctttgattaa caaaccgttt gttgaggtat ggaaggaaat ttggagttaa aatgtcggaa
      961 aactctttga tttcaattat tatacctgtg tataatgccc gggattatat tgctaaatgt
     1021 ttggattctc taatttgcca aagttacaaa aatattgaaa tcatttgtgt tgatgattgt
     1081 tctactgacc aatctttgaa tattataaat gactatgcaa aaaaggattc ccgtttaaaa
     1141 attttttcaa caggtcaaaa tagcggcccn ntacggcaag aaatatgggg ctggataatt
     1201 cacaaggcga ttttattatg ttttgtgata atgatgatac ctattcacaa aatatgtgcg
     1261 agttgatgct taacgccgcg aaggaatatg atgatgagct tgttacttgt aaatccaata
     1321 tagaaaacag ctcacttgat aaagaattgg ccaattatat taactctaac cctgagggaa
     1381 atattaaact aaacgattgc ataaaacatt ctataaatgt tttgctctgg aataaaatat
     1441 atagaaaatc tatcatagac aaatacgata ttagatttcc tgacggcgtt tcggcagaag
     1501 atgatgcttt tattatgcaa tatgttagtg ttatatcaaa atactgcggg ctaaagctct
     1561 atctgtacaa tcatcttttt cgcacaactt cttacacaaa tacaataggc cgagcaaaag
     1621 ctgcggagaa aaaatttgat aaaataaaaa tcataaaaaa tatgtatgat tttttgataa
     1681 aacacgatat ttttgattct caggaagaat attttaaaaa cagaacaaaa gccgagctca
     1741 tatatatgtt ttcttataac aaagagcctg gcgataagga aactataata cgtctgtaca
     1801 atgattttgt aaaaaatgca cagcatttgg attacaaaaa gtataactat cactgttttt
     1861 acaaaaggct gtataaaagg ctgaaccctt ttaggttgtg tctgttgata aataaatgtt
     1921 attggttttg aacataaaga tgagaggcgc taatgaaaag tcctaaggat atgaaaataa
     1981 tacagataga tattaccaat gcctgcataa acaggtgttc taactgtaca aggttttgcg
     2041 gtcatcatac aaaacccttt tttatggatt ttgaaacttt taaaaaagca gtagattcct
     2101 ttgacggttg gaaaggctgt gtcggcatta tcggtggcga acctacgctg catccggaat
     2161 ttgaaaaatt tgtggattat atgaggcaaa aaagagtagg acattttctc tacaattcaa
     2221 gaaagcctat ttataatatg caagagcata tctataaaaa tttaaacaat acctgtgcac
     2281 agatagggct ctggtcttct ttgaacaaag gctattacag acattttgaa actattaatg
     2341 atacttttga ctggcagctt ttaaatgacc acaacaacaa atgcttgcat caggctatat
     2401 tgatggcaag aaaagatctt ggaattagtg atgaagaatt tattaataaa agagataact
     2461 gctttgctca aaacacctgg tctgcaacga ttacgcctaa aggtgctttt ttctgtgaaa
     2521 ttgctgctgc tcttgatatg ctttttgacg gacccggcgg ctggcctgtt gaaaaaggct
     2581 ggtataaccg cacaccggaa gaatttggtg aacagctgca atggtgcgag ctttgttctt
     2641 tgtgtcttga tgtaccacag aggatttctt gtgaggatat agatgacata tctcctactt
     2701 tgttagaaaa acttaaagaa gcaggctctc caaaaattaa agcagggaat tactgtctgc
     2761 acgataaaga agactatgaa aaacataaag attcttacaa atcttttaca cactgcgatg
     2821 actatatgca ggcaggctca aacataagaa caacaactga taacaaaaat tactatccac
     2881 gttcttttga aataacttct gccgatgatg cggactgtgt tattgacaaa aaaacagact
     2941 gggtagtaat ttcaaaaaac aaaagagatg caaaaaaaat atcaaaatat ttgacaaata
     3001 tggtaatcaa tcccggctgc ttgtataaat acaaaggtga gctnnnnnnn nnnnnnnnnn
     3061 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn aaaaaactgg agtcatatta cgggtctgat
     3121 aaagtagtcc gtgttgatat tgtaaagcct gattctttta tcaataatat aagaaatcat
     3181 ataattaaag cattaaaagt tttcaaatat acgtggtttt aattatcaga ctagaggagt
     3241 gtttatgaag gtacttgtaa caggagcaaa cggatatata gggtcnnnnn nnnnnnnnnn
     3301 nnnnnnnnct tgctgttgat ataaaccacg actatattga cgacagagcg caaaagtttg
     3361 atacagatat tttttcacag aacaaaaact attttgactt ttttaataaa cctgatgtct
     3421 tgattcatct tgcatgcaaa gatgtgcctg ttcacaattc tttttaccat attgaatcga
     3481 tttcaaaaaa ctttgatttt ataaaaaatc ttgttgataa cggattaaaa caagttataa
     3541 cagtaggctc aatgcacgat atcggctatt atgaaggtga agtaaaagaa gatgtggagc
     3601 ctcacccaat gtctttttac ggcatatcaa aggatacttt gagaagattg cttgaagttt
     3661 atacaaaaga caaagacgta gtctaccagc atttgagatt tttctatact tatggtgatg
     3721 atatgcatag ctcaggctct gttttttcta aaattttgca aatggctgca gaaggtaaag
     3781 agacatttcc atttactgat ggcaaaaata aatttgatta catagaaatc aatgaattgg
     3841 caaaacaaat tgctgcagtg gctatgcaaa aagaggttaa gggtattata aactgctgtt
     3901 caggcaaacc tgtttccatt aaagaacagg tagagttttt tatcaaactg cacaacctct
     3961 ctataaaacc tgattttggc aaatatccgt cccgtcctta cgattctcct tgtatatatg
     4021 gtgacaatac aaaaatcagg aaaataatgg agcaaaaatc agctaaacat taataaattt
     4081 tattttttgc attttctctt taaacatctc ggttaaaaac gcgtgagcaa ccataccttc
     4141 ttgcattgcg atgtagatta tgtcaggttt gtaattcaat atttcattcg ggggaatggc
     4201 tgtgtaacct ttgtactcac tagttttttc aaactttctg tcacttaagg ccacaacatt
     4261 tatattttta aaaacaccgt tttgcaaaag tgattcaaaa tgcttgcctg ctccgtaaac
     4321 tactactctt ttgtttttga gctcaatact gtttattcct ttttcgattg tcttgccaat
     4381 acgcagatgc catatgtcgt ataagaagtt tctaacaatg ttgaataccc tttttatgaa
     4441 aaccggacgc actgcatata aaacagtttc gcaacacgta gagctgtgat gatgaatgta
     4501 aaagttgtat ccaatattga gtgaatttaa atacaatgca atatcccaga gatgagaagg
     4561 tgcgtgataa atacatattg ccatatcagg cttgaatttt ttaatggttt tttgtgcacc
     4621 tctcaaagcg ttaggctctg cactttctat atccattttt atgtaatcga gtttgtttat
     4681 tttgttgtct tttacaaaat catccaatgc aaccagctcg cactctacag cgtctccgtt
     4741 aataggatat aaaacagaag aaccaccgtt tcctactgcc atttgtaatt tttcgtgctt
     4801 gttccaaagc ccgagacaaa gcaattctat attttttagc aaaggtttcg ttgctattat
     4861 gttttttgct ttttcgcatt ctattggtga tgcttcaaac gcaaatatct tgcctttttc
     4921 tccgataagt tctgtatatt tttcaagctc aaaaatgctt gaagagatac cggcatccac
     4981 aataacagca ccttttttga ccgttggcat aagctcttga gggaaataat ccatttctcc
     5041 gttataagct aaataacccg catcaccttc tgttagcgat tttagacgct gaagaaaaac
     5101 ttttttactt ttttttgaag ataaaagtga atatacttta tcaatttctt gtttatgtgc
     5161 ttcataaaag ctttttagcg gcggaaaagt caacatacag ccgtttttat aatcagcagg
     5221 tgtgaagaag taatacaaac cttttctgtt ttgggcaatc atattcattg ttgcaatcca
     5281 atgattgtcg accatttcgt aaaaatcaat ataaaccgca agattgtttt tgtcatagtt
     5341 gtattctaat gattctacgg ggatgttttc atattcggaa atatcatttt ttcttggaaa
     5401 gtaaggggat atcaaaattc tttcaatttt ggcgccaaat ttatcttgaa aaacttttac
     5461 ggctgtttca atttcataat caaagcaaac aatagaaacc gtgtttaaat ttgattctgc
     5521 aaagtttttt ctgtatttct ccagcccgtt ataaagtttt ttattaatca tatattcctt
     5581 actattagta gattgtcttt taaaaattat ataaaaaact gattatcata tcaatttgtt
     5641 aaatattcta tcgtgaaaaa aatcacattt gtaattgagg ttctctgtta tattgcaata
     5701 taatttgtat atacgcatag tctctctgac agcgtatttc aaatgtataa tatttttaat
     5761 aattgtaaaa ataacacttg aaattttatt ttgattgggt tatattaata gtgaataatt
     5821 tcacgataaa ggagacgtta cactatggca actaaaaaac aagccgaaac tgaaaagctc
     5881 gaaaaagctt tcaacaaatc aagtgaagtt aagactcatg acgatttgaa attaatcatt
     5941 gaaagagcta aaaaagctca aaagatttat gctactttct ctcaagaaca ggtagacaaa
     6001 atctttaaag cagctgctac tgccgctgac aaaatgagaa ttcctctcgc taaaatggct
     6061 gttgaagaat caggcatggg cgttatggaa gataaaatta ttaaaaacca ctttgctgct
     6121 gaatatatct acaacaaata taaagatatg aaaacagccg gtgttatttt tgaagataaa
     6181 gctaacggaa tcaaaaaagt agctgaacct atcggtgtta ttgctgcagt tatccctaca
     6241 actaacccga cttcaactgc tattttcaaa tcattaatcg ctttaaaaac aagaaacgct
     6301 cttgtattct ctccacaccc gagagctaaa aaatgtacaa tcgaagctgc aagaattgtt
     6361 ttggaagctg ctgttaaagc aggtgctccg gatggtctta ttgcttggat tgacgaacct
     6421 tcagttgagc tttcagctgc attgatgcac cacgaagaca ttgatatgat tcttgcaaca
     6481 ggcggcccgg gaatggttaa agcagcttac tcttcaggca aacctgctct tggtgtaggc
     6541 cccggtaaca ctcctgctgt tatcgacgaa actgctgata ttaaaatggc tgtttcttca
     6601 gtacttatgt caaaaacttt cgacaacggt atgatttgtg cttctgaaca atcagttgtt
     6661 gtagtaaaag acgtatatga cgaagttaaa aaagaatttg ttttaagagg tgctcacatc
     6721 ctttctaaag cagaaaaaga taaagtagcc gctactatca tcaaagacgg cagattaaac
     6781 gctgctattg taggccagcc tgcatacaaa attgctgaaa tggccggcgt aactgttcct
     6841 caagatacaa aagttcttat tggtgaagtt acagatatat gcgaagaaga atcttttgct
     6901 cacgaaaaac tttctccggt actggctatg tacaaagcta aagactttga tgatgctgta
     6961 caaaaagcat atgaccttgt tgattttggc ggagcaggcc acacatctgt actttacaca
     7021 gacgaaagag attctgaaag aattgaaaaa ttcggtgtta aactccatac ttgcagaatc
     7081 ttaatcaaca caccttcatc tcaaggcggt atcggtgact tattcaactt tagactcaat
     7141 ccgtcattga cattgggttg cggctcttgg ggcggcaacg cagtaagcga aaacgttggt
     7201 cctcaacact tattgaacat caaaacagtt gctgaaagga gagaaaacat gctctggtac
     7261 aaagttcccg caaaagtata cttcaaaaga ggagctttgg acttggctct cagagaactc
     7321 agcggcaaaa aacgtgcatt cattgttact gacagattct tgttcaattc aggtatgaca
     7381 acagcgatta caaacacact ggatgaaatc ggtgttgatt atcaaatctt ctttgatgta
     7441 aaacctgacc cgacattgtc tacaatcaac gatgcaatga tgatggttaa agcatatgaa
     7501 cctgatgtat tcatcgcgtt gggcggcggt tcttctatgg acgcagctaa aatcttgtgg
     7561 ttaatgtatg aacagcctga tacagtgttc gaagacattg ctatgagatt tatggatatc
     7621 agaaaaagaa tctgcatgat tcctgaactc ggtaaaaaag ctgaaatggt ttgtgtaccg
     7681 acaacatcag gtacaggttc agaagttact ccgttcgcta tcatcactga tgatgaaaca
     7741 ggtgttaaat acgcaatcgc tgattacgca ttgactccga acgttgctat catcgacccg
     7801 aaccttgttg actctatgcc taaaggatta acagcagttt ccggttacga tgctatcact
     7861 cacgcaatcg aagcttacgt atcagttatg gcaacaaact ttacaaactc taactcttta
     7921 gaagctttga aactgttatt cagatacctc aaacgctctt atgacagcgg taaaaacgat
     7981 cctattgcaa gagaaaaagt acactatgct tcaacaattg caggtatggc atttgctaac
     8041 gcattcttag gaatatgcca ctctatggct cacaaactgg gtgctatgtt ccacgtacct
     8101 cacggtatgg ctaacgcatt gttgattaac caggttatca aattcannat tcaatgctac
     8161 agacaaaccg acaaaacaaa cagcattccc tcaatacaaa ttcccttgcg ctaaggctaa
     8221 atacggccaa atcgctgatg aattaggatt gggcggcaaa aacgacgatg aaaaagttga
     8281 attgctgcaa caagctttag tacaaatgaa aaaagacctc ggcttgccga tgtctatcaa
     8341 agaattcggt atcganngct tgctaaactt gatgagcttg ttgaacttgc attcgacgac
     8401 caatgtacag gtgcaaaccc gagatatccg ttgtttgaag aaatcaaaca aatgtacctc
     8461 gatgcatact acggaagaat ataattctta ttgtgaaata agatcctcaa agaaaaaccc
     8521 gttgatgaaa gtcagcgggt tttttattaa aaaaattttt aataacttat gttatattct
     8581 tttacctgtt tcaacatcaa agaacaaaaa gtcattggtg ttgaattgca gcgtaatctc
     8641 tttgtcaaaa tgtttttggg tgtctacttt tgctgagcat tttgctccgt ttacattaaa
     8701 gtaaacaatc ttttcactgc caagcatttc agatatatct acaggcacag tgaaattgta
     8761 attagagttt attacatcca ttttttccgg tctgattcct atcaagactt ctgtgcggtc
     8821 tttgatgatt gttttttgct cttctgatag gtatacaata tattcattgt ttagctttac
     8881 ggtaccgtct tgtactttgc aagggataaa gttcattgaa ggagaaccta aaaatcctcc
     8941 aacaaaagtg tttgccggat tgtagtaaat ttcttcaggc ttgcctgcct gctgaatgat
     9001 tcctttgtcg agtactacaa ttctgtcacc cattgtaagt gcttctgtct gatcatgggt
     9061 tacatatata aaagttgttt gcaatttttc gtgtagtttt ttgatttcgg acctcatttg
     9121 tacacggagt tttgaatcca gattggacag gggttcgtcc ataaggaaga ccttaggatt
     9181 cctcactata gcccgtccaa gcgcaactct ttgtctttgt cctcccgaaa gctgtttggg
     9241 ctttctgttg agatattctg ttaaatcgag tatttcggct gcttctttga cttttttatc
     9301 aatttcatct ttttttagat ttcgcatttt taaagggaat gcgatgtttt cataaaccgt
     9361 catatgcgga taaagagcgt aactctggaa tacaaaagca atgtcacggt cttttggatg
     9421 tacgttattt acgcatttat ctccaataaa tatttggccg tccgtaatat cctcaaggcc
     9481 ggcaatcatc cttaaaattg tagattttcc gcatcctgat gagccaacca gcacaaggaa
     9541 ttctttatcc tgtatctcta acgacacatc attgataatt gtttttgtgt cgtatttttt
     9601 taccacattt tttaaggtga catttgccat gtgtttactc cgctaaatta taggcttatt
     9661 ctttcaacag gaataataaa agtgtaactg cagcctttca ttgactcaga ttcaacccag
     9721 atttttcctt tcaagagtct gaccagattg taaattattc ccatttcaag actttttgat
     9781 acggcttttt tagcaatata tttgtcaatg ttggcatacg ggtcaaatat attgttcaaa
     9841 tcagattcgg gaattcccat acctgtatca attattttta tcatcatata tgctttttca
     9901 ggcaaattag catttacact gaaacctgca atttctaaaa attc
//
LOCUS       DABS01000186           22658 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_982, whole genome shotgun sequence.
ACCESSION   DABS01000186 DABS01000000
VERSION     DABS01000186.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 22658)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 22658)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22658
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(1..270)
                     /locus_tag="CPT85_08455"
                     /pseudo
     CDS             complement(1..270)
                     /locus_tag="CPT85_08455"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     stop; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arginase"
     assembly_gap    141..149
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    399..406
                     /estimated_length=8
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            574..897
                     /gene="trxA"
                     /locus_tag="CPT85_08460"
     CDS             574..897
                     /gene="trxA"
                     /locus_tag="CPT85_08460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_923826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="DAB21024.1"
                     /translation="MSNALDINDGNFEAEVVNSSELTIVDFWAPWCGPCRKLGPVLEE
                     IAQDFEGKIKIVKLNTDENLKTAKEYSVSGLPTLLIFKEGKPVERLVGLMPKTSIITN
                     IEKHL"
     gene            complement(953..3172)
                     /locus_tag="CPT85_08465"
     CDS             complement(953..3172)
                     /locus_tag="CPT85_08465"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21025.1"
                     /translation="MESAEKFKYDSEKVRSAGLFSRAMKMFDPKSGNYNAVHERALTR
                     IVTGFIPAFFLANDAYNLSRICDDDAKAAEKEKKLRFNQETKRVLSNAYLQLITLGAL
                     SKYINRSKGTFIGVTAASVLLTESFSRLSNGKKLWFINKEEALKMNARENAGKTVEQQ
                     NKPVEKEETKNQSKPGFKGSKVFNGFGIMSDMPMTQMNNVAMSGLSDKAQGLKEVETS
                     KPLLTLPTIAKWFVGTVALGFALKHAKGVKLKNGAKIADYFDVISKKYDSFYNKLTQK
                     DYKIKKEDFKKITEKLENYDKVIAEKIKQVTLNYQKTEKVKSVAIDFAKELRAGKHDS
                     LAEIMEHIGNVRLDKSFDAIPKRKAAKAFFKQRDNKLITQNIKEFLSLMENKGFKNEA
                     AQIRELILDKNGNVLTENYTKTQKLIKKIAKDFSSTFENRFKIDADEENYKLFKEVIA
                     QLKQKDSNLAQKYDNLVENAVNAEELSFGKKNTPMIREVADFITEPFKFIWGTITLPY
                     KHIAKPFSKIIKPDNKLPEWDKEIKTVSNAISRITHKSRFANTSKMDLDSAEFSKYMN
                     KQIHKAFNTSTMSSLSNSDLSALAKNTSTAATAWFLMSDNHNMVMQKTNGEDKQGAVL
                     KAKERAIQETSRTFYNVMFINLFNNTFRSLYNSSLFGAQTVNTASTLVGEYVNRKAIG
                     MPVKASSRDEILNQEYENLHSKGIKGDVYRFMSRLTGKKVLSQRETKKPAKEQAVQK"
     gene            complement(3193..3711)
                     /locus_tag="CPT85_08470"
     CDS             complement(3193..3711)
                     /locus_tag="CPT85_08470"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21026.1"
                     /translation="MIINHKPNLLYDNRMVHKHKKLVKDEQSSNNYNAMPLSRESSEI
                     SFKGISFGNIKKAFSFYNKKQYNLENNISFLKKYIGKAPEVLNNDSSKWEQMKNSIRR
                     SADGKVTIYEKNWTQLLMEGIVYPVTDLPFHIAKAVRNSIKGKNTQSVQDKAAKSXAL
                     FKINLIHLITMI"
     assembly_gap    3238..3239
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3887..4375)
                     /locus_tag="CPT85_08475"
     CDS             complement(3887..4375)
                     /locus_tag="CPT85_08475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011432526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="DAB21027.1"
                     /translation="MAKDCSFDVVSEFDKQELVNAVDQTKRELTSRFDLKNTNSDIEL
                     EGDKAITITTADDMKLRNILDILQTKLVKRNLNIKILDPQPIENALGGNVRQVFNLXX
                     ELAKQIVADIKASKLKVQASIQGEQVRVSGKSKDDLQDVIRLLKEKEDAYNIPLQFQN
                     YR"
     assembly_gap    4072..4073
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4427..5326)
                     /locus_tag="CPT85_08480"
     CDS             complement(4427..5326)
                     /locus_tag="CPT85_08480"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21028.1"
                     /translation="MLSTIKHFIFIVLKQYKKGTEVIMHKVYYVKFLAFLMLAATVCP
                     AHAYKVKTFEPLRVNPLAVPYSAYQQPGANESYPKITQLEFTLFKKTYERENIYNRLT
                     RLENKLFRRNFNNMPLASRVDNILANIDPGIIYNISSRELAKLESKVLGRTYMNDDTE
                     SRITRLEKEMLGAMQGGNLTERFNTIKTASKHYNSYPELAQSQSVYPMPATYGMNNNW
                     SGTRVNRGVGGLLQNVLGAIFGDFSTTGTMTGFTPPIYDPYNPYGAFTNPGMGQQNYY
                     MGNHGGYIDNRNIGSGSSVRILD"
     gene            complement(5351..5959)
                     /locus_tag="CPT85_08485"
     CDS             complement(5351..5959)
                     /locus_tag="CPT85_08485"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21029.1"
                     /translation="MKKIFGRIFILFFIGLFTTGGGYKGSLPDISTQFEYLQTTPKAT
                     KPIFKTLDEFENVPQYKKVPRENPSYIDIILKKDKTSPYINDLNDVILILEKMQKCIQ
                     NHGSVQKFNAIASSIIDHADYMAEKYENRPEKYYISFVKLQSIAAQARAVATLQCESQ
                     VYIKYLTYQGEGQIYSKESIERQILLFEEELEKTIRILKDST"
     gene            6033..7262
                     /locus_tag="CPT85_08490"
     CDS             6033..7262
                     /locus_tag="CPT85_08490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018048204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein
                     RarA"
                     /protein_id="DAB21030.1"
                     /translation="MNLFDSLENSNKQVPLAETLRPKTLDEYLGQNQVVGENTAFINL
                     LRSGRLFSCIFWGPPGCGKTTLARLIASNTNSEFIELSAVNSGIKDIKDCVEKAKENL
                     RYNKKTILFIDEIHRYSKTQQDALLPYLENGTFYLIGSTTENPSFQVVPALISRVQVL
                     MLQPIDDDNLYSIVEKGFKYLSDKHGPIVLKQQVIDFIVKYATGDARLALNLVENSYF
                     AADFKDNTRCLSLEILESLAQEKRIKYSRQEHYDMASAFQKSMRGSDKNAAIYWLAKM
                     IAAGEDPRFIARRMIVCAAEDVGDADPNAFNIAVNAHKSVELLGLPEGRIPLALAVEY
                     ICDAPKSNAAICAIDEALDDIAGGLDYPPPMHLRDAHYKDAKKYGFGKGYVYTHDNPE
                     YKQQFLPDELKDKRYFK"
     gene            complement(7331..7870)
                     /locus_tag="CPT85_08495"
     CDS             complement(7331..7870)
                     /locus_tag="CPT85_08495"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21031.1"
                     /translation="MGYAIFTARKLMLTNRVNQLSMRILQLSQQQQTLADNAARMERA
                     MAATRNLFSTIGNAFQMGMTMQQNILSQQLSQSIQNNGGKTDSPETKALYTQMLGMYM
                     NGGGNFMSTGPGMLLSSMNQMMETVNENKMRQVKDMETQIELQRKSLETQLNAAQKEL
                     EKVEQQEDKEIERSAPKFA"
     gene            complement(7993..8400)
                     /locus_tag="CPT85_08500"
     CDS             complement(7993..8400)
                     /locus_tag="CPT85_08500"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21032.1"
                     /translation="MKQLIIFLVVFLFASTGKCFAAHQYLEKEYQNVWCKAHNGATEY
                     ILNDKTRIDCLTKEHAIEFDFAQKWAESIGQALYYSLCTNKTAGVVLIMENPQKDVKY
                     LTRLQEVAKKYNIKVWTMTPQDMHNERNCSNMQ"
     gene            complement(8510..8585)
                     /locus_tag="CPT85_08505"
     tRNA            complement(8510..8585)
                     /locus_tag="CPT85_08505"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(8550..8552),aa:Val,seq:tac)
     gene            complement(8644..10059)
                     /locus_tag="CPT85_08510"
     CDS             complement(8644..10059)
                     /locus_tag="CPT85_08510"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21033.1"
                     /translation="MANKTIAQALIKAQQFEDEDKFEQAYECYKYAHEIDKNDTDVLQ
                     KLAVAAQTLNYNDDAINYWNLFMALKPEDPISYNQLLDLYFHNNKYEYYMTRAKLKTL
                     EQRIAQATDDYKKAINNTTDEKEIITARYLLAQSYEIINKPMQAIDEYLKILDHDHNE
                     NVYLSLANLYYTEDKPAAINVLQQAINHYPQSVAIKEFLCQLYLATGNCEQAEKYAVS
                     VFNKIKALLMQEKNDEAYELLQTLTDKDKQDISYPALMAEYYYNKGEDENTLKYIEMF
                     EKLNPDSPLPSQMRALVYEKQNNDYEAHYNWGKYYIKKNNHELALDEYLNAYNTNPKD
                     TRAIKDLINLYSVLNDNFACAEFCEKLVAIETDDIATLKRLVKFYEEQGYEDKVMEYL
                     FALSEINTKDYDTFLKLGKHAENSRRIDEAIDYYQKYLKFAPNSDEKEEIKKKVDLLA
                     SGEMVDEQGFLDKLLGLFSKK"
     gene            10174..12145
                     /locus_tag="CPT85_08515"
                     /pseudo
     CDS             10174..12145
                     /locus_tag="CPT85_08515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_954303.1"
                     /note="The UvrABC repair system catalyzes the recognition
                     and processing of DNA lesions. The beta-hairpin of the
                     Uvr-B subunit is inserted between the strands, where it
                     probes for the presence of a lesion; frameshifted; too
                     many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
     assembly_gap    10602..10639
                     /estimated_length=38
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    11902..11925
                     /estimated_length=24
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(12142..12603)
                     /locus_tag="CPT85_08520"
     CDS             complement(12142..12603)
                     /locus_tag="CPT85_08520"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21034.1"
                     /translation="MILFYFSRLQQKPLLYXFILIGFFVVSFVVGLFNFEGVPQLVAI
                     WLIRFFILAVLVTALINFNQNYVLKDGFDASKIVAGVADVLVYTVVCLLLIAIYSLFV
                     VAPTLYLIYSFFKIGPLFNYVSVFFVTMNLAILSDYWGQLHFDIESKNNYY"
     assembly_gap    12553..12554
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            12792..12986
                     /locus_tag="CPT85_08525"
     CDS             12792..12986
                     /locus_tag="CPT85_08525"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21035.1"
                     /translation="MSWYTDLIESTIDAIKFPFASYYNIYLFNTQLLHILDFRAKQPE
                     NAGLLSTWLIKINPMVVEIR"
     gene            13023..13361
                     /locus_tag="CPT85_08530"
     CDS             13023..13361
                     /locus_tag="CPT85_08530"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21036.1"
                     /translation="MLKGLSGQDLINQNLIQGNNVEKLTSAKKNPYADIDKNLLIDET
                     SISNEAINLYQRDMDIRKFASLAMSDPENLSHNTLVAQNVFSLQDSSFENKVIEGIFN
                     NKTFLKDLFG"
     gene            13383..14633
                     /locus_tag="CPT85_08535"
     CDS             13383..14633
                     /locus_tag="CPT85_08535"
                     /inference="COORDINATES: protein motif:HMM:PF13414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21037.1"
                     /translation="MENSDIDNVRGLSGVDFEGDDRHSSEKVARVYEFYESGRYQEAL
                     SMAEADPQISAMSYGQVLMGNCYKKLGSKNSAMAHWKKAVEISPLEHSAYINIANELY
                     EQGNAAEAILNWHTAATIVPENPTVNLNLALAYDKKGSRIKATKYFEKYLRYEKKVNT
                     QNYLTIKHTISNLTAKVDFLAKKVEEFKLKKDLKTIAALYLKMIATYANLPNIYSNIA
                     EILYFDRNFEKALEFYLIVYLNYPHTPKILLEIANLYYVLQKPDYAYAFYSRALDVLS
                     EGTSYYSKTKSKLSSLSYILRDPELIETHLQKAREAEAQNEYEKAIDEYENYLILTES
                     DNPDIQQLIDKYKIFLNPEPFVINVLYNQIPDLMNKKKLNACVELCDRIMTLATQNSK
                     EVIYAMKCKSECKRIIIAREQFGV"
     assembly_gap    14637..14638
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            14661..15029
                     /locus_tag="CPT85_08540"
     CDS             14661..15029
                     /locus_tag="CPT85_08540"
                     /inference="COORDINATES: protein motif:HMM:PF03692.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21038.1"
                     /translation="MLKRTYYRSGHCIGCGECCRQIYVRHVKNVVQTEDEFQKLRLLH
                     PFYTYLKIVGKDDIGLIFECQNLDKETNRCKIHKKRPGICRRYPVEAIFMMGGELGKK
                     CGYKFTPIESFDEVFNNLNK"
     gene            complement(15018..16199)
                     /gene="folP"
                     /locus_tag="CPT85_08545"
     CDS             complement(15018..16199)
                     /gene="folP"
                     /locus_tag="CPT85_08545"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="DAB21039.1"
                     /translation="MRNDFKIKLINCKEDDLIHIGFDKAYVKKGINKHKFRTIKIYDL
                     NCAQANILKQTALSTGTDCAVHKQVITGKVELSDCILSGTISQLEKICEKLKYQPLKL
                     SSLASQISDTLFYKPETLMIRDIVLDWKTPYIMGILNLTPDSFSDGGKYNTTEKAINH
                     YKKMIEDGADMIDIGGESTRPFSQKITVEEEICRVIPVIEKIRQTDKKTLISIDTRNA
                     KTAQEALKAGADIINDISALDWDKEMLNVIVNNKCPVILNHSSASPDIMQKNTDYTDV
                     VDDIYNYLDEKIDRLTKAGISKNSIIIDPGIGFGKTTEQNFEILKRIQEFKTLGCAIL
                     IGHSRKNFIKETINTESKEKLDITTAIISEKLAANGVNILRVHNVVNHDVVKRINNLF
                     I"
     gene            complement(16220..16981)
                     /locus_tag="CPT85_08550"
     CDS             complement(16220..16981)
                     /locus_tag="CPT85_08550"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21040.1"
                     /translation="MLQIHSLNCSPIKPTSHNFGNREENKIEYPMDYMAAGELLDELD
                     LKNFNEDTAKKIGEFAETINVTDKNEKYTKPFKQMMTTLSLAALGGIVTKGFYNKLLV
                     FTEKNTGLLDWAGKEGSKLFSKISEKVTPSEEKTFKGFVSRTLNNGINWCKEYAQKGV
                     DKVDIEKAIESAKNAAKSKSVDAKAIEVQTFAKNGIKKLTGTIAGITSGIGVVEKGTQ
                     DKDKDGIPDMYQGKGNEIKKNAVAMQAIEAALDTM"
     gene            complement(17297..>18463)
                     /locus_tag="CPT85_08555"
     CDS             complement(17297..>18463)
                     /locus_tag="CPT85_08555"
                     /inference="COORDINATES: protein motif:HMM:PF13291.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(p)ppGpp synthetase"
                     /protein_id="DAB21041.1"
                     /translation="AAHWKYKEKGSQKANADTDIQFSWMRKLAEMEKDVSSASEYVES
                     VKLDLFSDQVFAFTPMGDVIDLPKDATPVDFAFRIHTDVGFRITGALVNGRICPLSTK
                     LHNGDIVEIMTSKTPAPRLDWLNFVVTKLAQSKIKQWYKKNKREEHITIGHNMLEAEI
                     GKAKFDEILKSQELKQIAEAMNYSCVDDLLAALGYGETTVNKITNRIKKSVDTDQPII
                     SHSKTKKSKNDIVGLEGMLYYFAKCCTPVPGEPIIGVVTRSKGVSIHRVDCASLDNVP
                     EERLIDIKWADKGLNKTYVASIRIDVQDKIGILKDVMIELTECNTNIAYANIKSNPAK
                     KIGIIEMGIEVDNINRLKTVITKLQSIPEVISVKRIQGTSNTKTPNAPMPKKKK"
     assembly_gap    18464..18512
                     /estimated_length=49
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<18513..19529)
                     /locus_tag="CPT85_08560"
     CDS             complement(<18513..19529)
                     /locus_tag="CPT85_08560"
                     /inference="COORDINATES: protein motif:HMM:PF04607.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(p)ppGpp synthetase"
                     /protein_id="DAB21042.1"
                     /translation="MTDNTEDKSEDYELPEQMQEDTEPALDFSIFEPLKEMLLNQHRP
                     QQDINEIEEAFVFAAKLHAGQYRISEEPYIIHPVEVAKILTDLMMDKHTIIAALLHDI
                     IEDTGTAPETIKEKFGEDVLNLVQGVTKLGKYQFKSKEERQAENFRRMFIAMANDVRV
                     IFLKLADRLHNMRTLNYMAAAKQQKIAQETLDIFAPLANRLGIGKIKAELEDLSLRYL
                     NPEKYFEIAQLVALKKAERDATIQVLVEKIGQMLKQHKIKAAISGRSKHYYSIYAKMK
                     RQNIAFHELYDISAVRVIVNSINECYEVLGIIHSQFKPIPGRFKDYIAMPKSNLYRSL
                     HTSVL"
     gene            19578..19864
                     /locus_tag="CPT85_08565"
                     /pseudo
     CDS             19578..19864
                     /locus_tag="CPT85_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012082877.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    19749..19751
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            19885..20112
                     /gene="secG"
                     /locus_tag="CPT85_08570"
     CDS             19885..20112
                     /gene="secG"
                     /locus_tag="CPT85_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008191847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="DAB21043.1"
                     /translation="MITTIFWIVQIISSLLLILLVMIHSPKGDGIAGIGGASHVFASQ
                     KNAESGLNKLTMWVAIVFFVSTFIAGFKIFG"
     gene            complement(20109..20585)
                     /locus_tag="CPT85_08575"
     CDS             complement(20109..20585)
                     /locus_tag="CPT85_08575"
                     /inference="COORDINATES: protein motif:HMM:TIGR01668"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqeG family HAD IIIA-type phosphatase"
                     /protein_id="DAB21044.1"
                     /translation="MIVRPDYKAKTVFEINYDKLKEDGIKTIAFDLDSTVMKSKSGVF
                     AEETLQLFDNLKKDFSIVIISNNSNLDYINKVITQTDIPMLFHAKKPLTKVAKEFLNE
                     NNVDKKSMVMIGDRPLTDILFGKLLGCKTVLVDSISWQEEKPIVRFARKLEGIFSI"
     gene            complement(20582..21835)
                     /locus_tag="CPT85_08580"
     CDS             complement(20582..21835)
                     /locus_tag="CPT85_08580"
                     /inference="COORDINATES: protein motif:HMM:PF16325.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase U32"
                     /protein_id="DAB21045.1"
                     /translation="MNKRVELLLPAGNIEKLDYAINYGADAVYMGMVDFSLRTMRKGD
                     VITAENLKRAIDTAHSYNKKVYMTLNIYAYDEDLKNLHENIDIIKDAKPDALIVSDFG
                     ILNILKTKLPDIDIHISTQTNTLNSEAVKFWRDFGATRVILARELSIKQLAQIRKNVP
                     DIELEVFVHGAQCVSLSGRCLLSDYMTHGERKANHGGCSQPCRWKYKLLEETRPGEYY
                     EIEETARGTHILSTKDLALINYIPKLIEAGADSFKIEGRTKSLYYVSAVAKAYRRAID
                     AYYNNEKIDEKEMFNQLLKIGNRGYTTGFYLDEQDHEGYSYDVSKGLAGSDFLFEFWD
                     KSTKDDKNIYKVKIKNKILKNNVVEVITPNECFETTVEKIYNITLDEEKEVGNTNDEI
                     WVELSVEPQNYKYALARTLGIKNER"
     gene            complement(21867..22562)
                     /locus_tag="CPT85_08585"
     CDS             complement(21867..22562)
                     /locus_tag="CPT85_08585"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21046.1"
                     /translation="MQIQNRETGYKKINNATAFKGLPVAKIRLKNLPACDEITIIQLS
                     KEDLPFLNKMFEKINLEKMYPNLPEKKDFNKWKDMIFGAISNIEFGAKGFLAARKNKP
                     CAILSFSDINSNQGFYIDHAASWPLAPNEGTKGAGKSIFRHILGKGAEENKKLARLVP
                     DKLTPRGKNCNDFYKEIGFSKNEKYFTTEITANEQTNGFKQSCEKLDKVMEYKKITDG
                     TDTDLNSALNLDF"
BASE COUNT         6533 a         3818 c         3972 g         8196 t
ORIGIN      
        1 tttatcaggt tgttcttgtt ctaaaatttg aatagcagca tttgtttgtt ttaatataac
       61 atctctatct gttattccgt cttgaatttt tcttttttca tattcttcta caacaggtat
      121 tttcactatc ttttgattag nnnnnnnnna tgcaccaatg taatatccag tagaagactc
      181 ttcttctgaa aaatctggga gaactgaaga tacatctcca ccttgccact ggggataaat
      241 taaacgtatg gttgaaattt catttttcat ttgtttttct tgtaaattaa tacttatact
      301 ggtttatttt aacataaatt ttataacaaa aaagactcca taaggagtct tttaaaagtg
      361 gtgccacgtc tcggaatcga accaaggaca cagggattnn nnnnnnaagt ggcaaatgtt
      421 ttttaattgt caaacggtta tccgttactt tataatagca aatgaagatt cagagtcaat
      481 aatttttttt aaatatcttt atctggccta ttaattgact ttttgctaca attcaggtat
      541 acattatgga atgtaactaa ggaggagact ttcatgtcaa acgcattgga tattaacgac
      601 ggcaattttg aggcagaagt tgttaactcg tcagaactta ctattgttga tttttgggca
      661 ccctggtgcg gaccttgcag aaaattaggc cctgtacttg aggaaatagc tcaagatttt
      721 gaaggtaaaa ttaaaattgt taaacttaac actgatgaga acttgaaaac agctaaggaa
      781 tattctgtaa gcggtttgcc tactctttta atttttaaag aaggtaaacc tgttgagaga
      841 cttgttggtt taatgccaaa aacaagtatt atcactaata ttgaaaaaca tttataatta
      901 ataaaaagct aaaaaaaaga gtaatgaatt ttcattactc tcttttttta tactattttt
      961 gtacagcttg ttctttagcc ggtttttttg tttctctttg agaaagaact tttttacctg
     1021 tcaatctgga cataaatctg taaacgtcac cttttatgcc tttgctgtgg agattttcat
     1081 attcttgatt taaaatctca tctctggaag atgcttttac tggcatacca atagcttttc
     1141 tgtttacgta ctcaccaaca agtgtagatg ctgtattgac ggtctgtgca ccgaataagc
     1201 tgctgttgta caagcttctg aacgtgttgt tgaacagatt tataaacatt acattgtaga
     1261 atgttctaga cgtttcttgt attgctcttt ctttagcttt taatacagcg ccttgtttgt
     1321 cttcaccgtt agttttttgc attaccatgt tatggttatc agacatcaag aaccaagctg
     1381 ttgcagcagt tgatgtattt tttgccagag ctgacaaatc agagtttgaa aggctggaca
     1441 ttgtggatgt gttaaacgct ttgtgaattt gcttgttcat atattttgaa aattctgctg
     1501 aatccaaatc catctttgat gtgttagcaa atcttgattt gtgagtaatt ctgcttattg
     1561 cgtttgatac agttttgatt tctttatccc attctggtag tttgttatca ggcttaataa
     1621 tttttgagaa cggtttagca atatgtttgt aaggaagtgt tattgttccc cagataaatt
     1681 taaacggttc tgttataaag tctgcaactt ctcgtatcat aggtgtattc tttttgccaa
     1741 aagataattc ctctgcatta actgcatttt caacaagatt atcgtatttt tgtgcaagat
     1801 tagagtcttt ttgtttgagt tgtgcaatta cttctttgaa cagtttgtag ttttcttcgt
     1861 cagcatctat tttgaatctg ttttcaaatg tagaagagaa gtcttttgct atctttttaa
     1921 taagtttttg tgtttttgta tagttttcag ttaaaacatt gccgttttta tcaagtataa
     1981 gttcacgtat ttgggcagct tcatttttga atcctttgtt ttccatcaga ctcaaaaatt
     2041 cttttatgtt ttgtgtaata agcttgttat ctctttgttt gaagaatgct tttgcagctt
     2101 ttctttttgg aattgcatcg aatgacttgt ctaatctaac attaccaatg tgttccataa
     2161 tttcagcaag gctatcatgt ttgcctgctc tcaattcttt agcaaaatca attgctacgg
     2221 attttacttt ttctgttttt tggtaattta aagtgacctg tttaattttt tctgcgatta
     2281 ctttgtcata attttcaagt ttttcagtta ttttcttaaa gtcttctttt ttaattttgt
     2341 aatctttttg agtcaatttg ttataaaaac tgtcgtattt tttagaaatt acatcaaagt
     2401 agtctgcaat ttttgctccg tttttgagtt taacgccttt agcatgtttc agtgcaaaac
     2461 cgagtgctac tgtaccaaca aaccatttgg caattgttgg aagtgttaac agaggttttg
     2521 atgtttctac ttctttaagg ccttgtgctt tgtctgataa acctgacatt gcaacattat
     2581 tcatttgtgt catcggcata tctgacataa tgccgaatcc gttaaacact tttgaacctt
     2641 taaatccggg ttttgattga tttttggttt cttctttttc tacaggtttg ttttgttgtt
     2701 caactgtttt gcctgcattt tctctggcat tcatttttaa tgcttcttct ttgttgataa
     2761 accagagttt ttttccgttt gatagtcttg agaaagattc tgttaacaat acgcttgctg
     2821 cagtaacacc gatgaatgtg cctttgcttc tgttgatata tttagaaagt gcaccaagag
     2881 tgattagttg taaataagca tttgacagta cacgttttgt ttcctggtta aaacggagtt
     2941 tcttttcttt ttcagcagct ttggcatcgt catcacatat tctagacagg ttgtatgcat
     3001 catttgcaag gaaaaatgca ggaataaaac cagtaacaat ccttgtcaaa gctctttcat
     3061 gtaccgcatt gtagttgcct gatttggggt caaacatctt cattgctctt gaaaaaagac
     3121 ctgcggaacg taccttttcg gaatcatatt tgaatttttc tgcagattcc atatagccgt
     3181 tgaatgagtt aactatatca tcgttattaa gtgtattaaa tttattttga ataaagcnnt
     3241 gcttttagct gccttgtctt ggacagattg ggtatttttg cctttgattg aatttctaac
     3301 agcttttgca atatggaaag gcagatcagt aacaggatat acaattcctt ccatcaaaag
     3361 ttgtgtccag tttttttcgt atatcgtaac tttcccgtca gcgcttcttc ttattgagtt
     3421 tttcatttgc tcccatttag aagaatcgtt gttcagtact tcaggagctt taccgatata
     3481 tttttttagg aaacttatat tgttttcgag gttgtattgt tttttattgt aaaaactaaa
     3541 agcttttttg atatttccaa aagaaatgcc tttaaaggaa atctcacttg actctctcga
     3601 taaaggcatt gcattataat tatttgacga ctgttcatct ttcacaagtt tcttgtgctt
     3661 gtgaaccatt cggttgtcgt ataatagatt cggtttatgg tttattatca ttatttcctg
     3721 cccttatgta atttcgcata agatagtaag attagcaaga ctttgaaaac aaaatttaac
     3781 taattttaat attgtttttt acaagaattc actaacaata atatcaagtc agaacagatt
     3841 ttttattgct agtgcatgac aataatgcaa cataaattaa cattttttat ctgtaatttt
     3901 ggaattgcaa agggatatta tatgcgtctt ctttttcttt taaaagacga ataacatctt
     3961 gcaaatcatc tttgcttttt cctgatactc tcacctgttc accttgaata gaggcctgaa
     4021 ctttgagttt tgatgctttg atatcagcaa ctatttgttt agcgagttca gnnttaagat
     4081 taaaaacctg tctcacattt ccgccaagag cattttctat tggctgaggg tctaagattt
     4141 ttatattgag gtttcttttg acaagttttg tttgcaaaat atcgagaatg ttgcgaagtt
     4201 tcatatcatc cgcagtggtg atcgttattg ctttatctcc ttcaagctca atatcagagt
     4261 ttgtgttttt taaatcaaat cttgatgtta actctctttt tgtctggtca acagcgttaa
     4321 caagttcttg tttatcgaac tctgaaacca catcaaagct gcaatctttt gccataatat
     4381 tctcctttta ataccacgag actgtattat aacaaatttt tgtactttag tctaaaatcc
     4441 ttacacttga gcctgaacct atgtttcggt tatctatgta gccgccatga tttcccatgt
     4501 aataattctg ttgtcccata ccggggtttg taaacgctcc gtatggattg tatgggtcat
     4561 aaatcggcgg ggtaaaccct gtcattgttc ctgttgtact aaaatctcca aatattgcac
     4621 ccagtacgtt ttgcaaaaga ccgcctacgc ctctgtttac tcttgttccg ctccaattgt
     4681 tattcattcc gtatgttgca ggcatgggat acacactctg gctttgagca agttccggat
     4741 aagagttata gtgttttgag gctgttttga ttgtattaaa tctttctgtt aaattaccgc
     4801 cttgcattgc tccaagcatt tctttctcca gtctggttat tctggattct gtatcatcgt
     4861 tcatatatgt acgtccgagt actttgcttt caagttttgc aagttctctt gaggaaatat
     4921 tgtagataat cccagggtca atatttgcca atatattgtc taccctgctt gcaagaggca
     4981 tattattaaa gtttcttcta aacagtttat tttccaatcg tgtaagcctg ttatagatat
     5041 tttctctttc atatgttttt ttgaaaagag taaactcaag ttgtgtaatc tttggatagc
     5101 tttcatttgc accgggctgc tgataagcac tgtatggtac tgcaagaggg ttaactctga
     5161 gcggctcaaa tgtttttacc ttgtatgcat gcgcagggca tactgttgct gctaacatta
     5221 aaaatgccaa aaattttaca taataaactt tatgcataat aacctctgtc ccttttttgt
     5281 attgcttgag tactataaaa ataaaatgtt ttatagtgct tagcattaga cagataaata
     5341 aaatttttgg ctatgttgaa tcttttaaaa ttctaatagt tttttcaagt tcttcttcaa
     5401 aaagtaaaat ttgtctttca atgctttctt tactgtatat ttgaccttct ccctgataag
     5461 tcaaatattt tatataaact tgagattcac attgtaaagt tgcgactgct ctcgcctgag
     5521 ctgcaatact ttggagtttt acaaaagaga tataatattt ttctggacgg ttttcgtatt
     5581 tttctgccat atagtcggca tggtctatta ttgagctggc tattgcatta aatttttgta
     5641 cactgccgtg gttttgtatg catttttgca ttttttcgag gattaaaatt acatcgttta
     5701 agtcatttat gtatggcgat gttttatctt tttttaaaat gatgtcaata taagacgggt
     5761 tttctctggg gactttttta tactgtggga cgttttcaaa ttcgtctaat gttttaaaaa
     5821 taggctttgt tgctttgggt gtagtttgaa gatattcaaa ttgagtgctg atatcgggca
     5881 atgagccttt gtagcctcca cctgttgtga aaagacctat aaaaaacagt ataaatatcc
     5941 gaccaaaaat ctttttcata gttataatta taactgaatt ttaagtttag tcatcttttg
     6001 actttaataa tcaagccatt tatcatgttt ttatgaattt atttgactca cttgaaaatt
     6061 ctaataaaca agttccgctt gcagaaactt taaggcccaa gacacttgat gagtatcttg
     6121 gccagaatca ggttgttggt gaaaatacag cttttatcaa cctgttgcgc tctggcaggt
     6181 tgttttcctg tatattctgg gggccgcccg gctgcggaaa aacgactctt gctcgtttaa
     6241 ttgcctccaa cacgaacagt gaatttattg agctcagtgc tgttaattca ggtatcaaag
     6301 atataaaaga ttgtgttgaa aaagccaaag aaaatctgcg ctacaataaa aaaacaattc
     6361 tttttataga tgagatacac agatactcta aaacacagca ggatgcactg ttgccgtatt
     6421 tagaaaacgg tactttctat cttattggtt caacgacgga aaacccatca tttcaggttg
     6481 tgccggctct tatatcaagg gtgcaggtgc ttatgcttca acctattgat gatgacaatt
     6541 tgtactcgat tgtcgaaaaa gggtttaaat atctttcaga taagcatggc cctattgtct
     6601 taaagcaaca agtcattgat tttattgtga aatatgcaac aggcgatgcc aggcttgctt
     6661 taaaccttgt ggaaaattca tactttgctg ctgattttaa agataacaca agatgtctct
     6721 ctcttgagat acttgagagt cttgctcaag aaaaaagaat aaaatactcc cgtcaggaac
     6781 attatgatat ggcatctgct tttcaaaaaa gcatgcgtgg aagtgataaa aatgctgcta
     6841 tatactggct tgccaagatg atagctgcag gcgaggaccc tcgttttatt gcaagaagaa
     6901 tgatagtttg tgcagcggaa gatgtgggcg atgctgaccc taatgctttt aatattgcag
     6961 taaatgcgca caaatcagtt gagctgcttg gccttcccga gggtagaata cctttggctc
     7021 tggctgttga gtatatttgt gatgctccaa aatccaatgc tgctatctgt gcaatagatg
     7081 aggcgcttga cgatattgcc ggcgggcttg actatcctcc gcccatgcat ttgagagatg
     7141 cacattataa ggatgcaaaa aaatacgggt ttggtaaagg ttatgtttat acccatgaca
     7201 atcctgaata caaacagcag tttttgccag atgaactcaa agacaaaagg tattttaaat
     7261 gaaaatttaa agtaaaaagc caaattcaat aaagaatttg gctttattat tggtgtattt
     7321 gtgattttta ttaagcgaat ttcggagctg aacgttcgat ttctttgtct tcttgttgtt
     7381 cgactttttc caattctttt tgagctgcgt tcaactgtgt ttctaaagat tttctttgaa
     7441 gctctatttg agtttccata tcttttactt gtctcatctt gttttcgttg actgtttcca
     7501 tcatctggtt cattgagctc aacagcatgc ctgggccggt tgacataaag ttgccgccgc
     7561 cgttcatata cataccgagc atttgtgtat aaagtgcttt tgtttccgga gaatctgttt
     7621 tgcctccatt attttgaata ctttgtgata attgttgact taagatgttt tgctgcattg
     7681 tcattcccat ttggaatgcg ttgccgatag tgctgaagag gttcctcgtc gctgccattg
     7741 ctctttccat tcgagcggca ttgtcggcca atgtctgttg ttgctgactc aactgcagta
     7801 tccgcatcga tagctggtta acgcggttgg tcaacatcaa ttttcttgct gtgaaaattg
     7861 cataacccat tgtttggatt cctctcgtgt tttaattaat tcctcgtata taaataaaaa
     7921 cattctacat tcaataattg cttaatttct tcatgttttg taaagattct gtaacaatta
     7981 taaataatat gtttattgca tattgctgca attgcgctca ttgtgcatat cttgaggagt
     8041 cattgtccaa acttttatgt tatatttttt agctacttct tgtaatcttg tcaggtattt
     8101 tacatctttt tgaggatttt ccattattaa aacaacacct gctgttttat ttgtacaaag
     8161 gctgtaataa agagcctggc ctattgattc agcccatttt tgagcaaaat caaactctat
     8221 tgcatgttct tttgtaaggc agtctattct tgttttgtca ttcagaatat attctgtagc
     8281 tccgttatga gccttgcacc atacattctg gtattctttc tccagatatt gatgtgctgc
     8341 aaaacatttg cctgttgaag caaataaaaa gaccacaaga aatattatca attgcttcat
     8401 taataacctc tatttattta atttatagaa gttattatat tgattaaaaa aaaagaccta
     8461 ttacatttat gcaaaataaa aaagacgact tatagccgtc ttttattaat ggtgggcgtt
     8521 gagaggctcg aactcccgac atcttccttg taagggaagc gctctaccaa ctgagctaaa
     8581 cgcccgaatc aattggtttg tataactata ttactaaata aatatgctct gtcaataatt
     8641 ttgttatttt tttgaaaaaa gtccgagaag tttatctaaa aatccctgtt catcaaccat
     8701 ttcaccactg gcgagaagat caactttctt ttttatttcc tctttttcat cagaattagg
     8761 tgcaaattta agatattttt gataataatc tatcgcttcg tcaattcttc tgctattttc
     8821 ggcatgcttg ccaagtttca aaaatgtatc ataatctttg gtattaattt ctgacagtgc
     8881 aaaaagatat tccataacct tatcttcata cccctgttcc tcatagaatt tgaccagcct
     8941 ttttagtgtt gcaatatcat ctgtttctat tgcaacaagc ttttcacaaa attctgcaca
     9001 agcaaagttg tcattgagca ctgaatagag attaatcaaa tcttttatgg cccttgtatc
     9061 tttggggtta gtgttgtatg catttaaata ctcatcaagt gccagttcat ggttgttttt
     9121 ctttatgtag tatttgcccc agttgtagtg tgcttcataa tcgttgtttt gtttttcgta
     9181 aactagtgct ctcatttggc ttggcagagg gctgtctggg ttaagttttt caaacatttc
     9241 aatatatttt aaggtgtttt cgtcttcgcc cttattgtag taatattctg ccatcaaagc
     9301 cggatagctt atatcctgct tgtctttatc tgtaagcgtt tgtaacagct catatgcttc
     9361 atcatttttt tcctgcataa gaagtgcttt tattttatta aacacactta ctgcatattt
     9421 ttcagcctgt tcacagtttc ctgttgcgag gtataattga caaagaaatt ctttaatagc
     9481 aacgctttga gggtaatgat ttattgcttg ttgcagtaca ttgattgctg ccggtttatc
     9541 ctctgtataa tataaatttg caagtgataa ataaacattt tcgttgtggt cgtggtctaa
     9601 aatttttaaa tattcatcaa tagcctgcat gggtttgtta ataatctcat agctttgcgc
     9661 aagaagatat cgggctgtta ttatttcttt ttcatcggtt gtgttattta ttgctttttt
     9721 gtagtcatca gttgcctgtg ctatacgctg ttccagtgtt ttcagctttg ctcttgtcat
     9781 gtaatattca tatttgttgt tatgaaaata taaatcaaga agctggttat aagatatagg
     9841 atcctcaggc tttaatgcca taaaaagatt ccagtaattg attgcatcat cattgtaatt
     9901 aagggtttga gctgcaacag caagtttttg cagcacatct gtatcgtttt tatcaatttc
     9961 gtgtgcatat ttgtagcatt cataagcctg ctcaaatttg tcttcatctt caaattgttg
    10021 tgcttttatc agtgcctgtg caatagtttt atttgccatt tagatatccc ctaatgatga
    10081 tttttattaa tgttcttttt atttattgat tatacaaaac atattctttt gaaacaagaa
    10141 caagagatta ataattggtg ctaatatatt gttatggaaa aaaagtttga aatagtatca
    10201 aatcataaac cggccggaga tcagccaaaa gctattgaat cacttgttga agggataaaa
    10261 gcaggttgtg atgcacaaac cctgcttggt attacaggtt caggtaaaac ctttacaatt
    10321 gccaatgtta ttgagcgtgt gcaaaagcct acacttgtca ttgcgcataa taaaaccctt
    10381 gcagctcaat tgtataatga gtttcgtgaa ctatttccca ataatgcagt agagtatttc
    10441 atcagctatt atgactatta tcaaccggaa gcttatattc ccagaacaga cacattcatt
    10501 gaaaaatccg ctacaattaa tgaagaaatt gaccgcctcc gtcacaatac aacaaggagt
    10561 ctttatacaa gaaaagatgt tattgttatt gcttcagtaa gnnnnnnnnn nnnnnnnnnn
    10621 nnnnnnnnnn nnnnnnnnnt gaaagtaggg gggcaaatgg acagggaaga gcttttgcat
    10681 catcttgtgg ctgctcaata ttcaagaaac gatttggagc tggacagggc taatttccga
    10741 gcaagaggtg atgttgtaga agtaatgcct tcgtacgaaa aagttatcac acgggtgagc
    10801 tttttcggtg atgaaataga aaaaattaca agaatagaca atgtaacagg ggaaattctt
    10861 gaaacaccta aagaagttgt acttttccct gctgtgcatt acctgtctga tgatgaagac
    10921 aaggaagaaa caatcagact aattaaagaa gagctaaaaa taaggctggg agagctttat
    10981 gcacaaaata aactggtaga agcgcagcga cttgaacaaa gagttaaata cgacattgaa
    11041 atgataaaag agatgggata ttgttctggt attgaaaact attcccgtat aatagaaaga
    11101 agagctcccg gttctgcacc aaaaacattg attaattact ttaaggacga ttttttgctt
    11161 gtaatagatg agtctcacgt tactatccct caattaaagg gtatgtacag aggtgatgcg
    11221 gcaagaaaag atgtgctaat tgattatggg ttcagacttc cttgtgccaa ggataacaga
    11281 cctcttactg atgaagaatt ctgggaaagg gttcatcaaa aaatatttat atctgcaaca
    11341 cctgctgaat ttgaacgcag tatttcagac cagatggttg agcaaattat caggccaaca
    11401 gggcttgtcg atcctgaaat cagtgtcaga cctacggaaa atcaggtgga tgaccttatt
    11461 tcggaaatcc aaaaaataac agataagaat gaaagagttc taataacaac acttacaaaa
    11521 agaatggccg aagaccttac tgaatatatg aatcaaatgg gagtaagagt tcgttatttg
    11581 cacagcgaaa ttcaatcatt ggagcgtgtt gaaatcttaa gagatttaag gctcggtaca
    11641 tttgatgttc ttgtaggggt taacctgctt agagaaggtc ttgatattcc ggaagtttca
    11701 cttgttgcta ttatggatgc tgataaagag ggatttttgc gttcagaaac aagtcttatc
    11761 caaactatag gccgtgcagc aagaaattct acaggcaaag ttattatgta tgctgataaa
    11821 atgactgaca gtatgaatgc tgcgatttca gaaaccaaca ggcgtagaca aatacaaatg
    11881 gcatacaatc ttgaacataa tnnnnnnnnn nnnnnnnnnn nnnnnaaata accttctgca
    11941 gcttgtttca agttaccgga accttgaaga tattgttgcg gaagaaatgg ttgagatgaa
    12001 tttgtctgtt aaagatatac caaaacttat tcaaaaactc gaaaaagata tgcattctgc
    12061 agccaaagtt ttggattttg aaagggctgc tcaaatcaga gatcaattga aaaaattaag
    12121 ggaaatgtct aaatcaaaag gctaataata gttgttttta ctttctatgt caaaatgcag
    12181 ctgaccccag taatctgata ggatagccag gttcattgtg acaaaaaata ctgaaacgta
    12241 attaaataaa gggcctattt taaagaacga atagataaga tacagcgtag gtgctactac
    12301 aaaaagggaa tatattgcta tcaataaaag gcaaaccact gtataaacaa gtacatctgc
    12361 tacacctgca actattttgg aagcatcaaa tccgtcttta agtacatagt tttggttaaa
    12421 gtttatcaat gccgtcacaa gtactgccag tataaaaaaa cgtataagcc atattgctac
    12481 cagctgtgga acaccttcaa aattaaaaag tccgacaaca aagctgacaa caaaaaagcc
    12541 tattaaaata aanngatata ataagggctt ttgttgcaac cgagaaaaat aaaacaggat
    12601 caataggcgg aagggtctgt attcgttgat ttatacggtt actcattata attgagcaaa
    12661 acccgagata tatataaaat attgtaatcc acacaactgc attgacgagg ctgaaagatt
    12721 ctccgggcac aatcatgctg tatagcaaat aaagcacata gctgaacact cccagcataa
    12781 gcaaggaata gttgtcttgg tataccgatc ttattgaatc aactattgac gccattaaat
    12841 ttccctttgc gtcctattat aatatttatc tatttaatac acaactactg catatacttg
    12901 attttcgggc taaacagccc gaaaatgctg gcttattatc cacatggcta ataaagatta
    12961 accccatggt tgtggaaata aggtgaaaag tatacataat attaatatga ggagagaagt
    13021 atatgttaaa aggactttcg ggtcaggatt taataaatca gaatttaatc cagggaaata
    13081 acgtagaaaa gttgacatcg gcaaaaaaaa atccatatgc cgatatcgac aaaaatcttc
    13141 taatcgatga aaccagcatt tcaaatgaag caatcaacct ttaccaaagg gatatggata
    13201 taagaaaatt tgcttcgctt gcaatgtctg accctgaaaa cttgagccac aacacacttg
    13261 ttgctcaaaa tgttttttca ttacaggatt ccagttttga aaacaaggtt atagagggta
    13321 tttttaataa caaaactttc ttaaaagatc tgtttggtta aaaagttcag attaggtagg
    13381 atatggaaaa ttccgatata gataatgtaa gagggctgtc aggcgtagat tttgaaggcg
    13441 atgacagaca ttcgtctgaa aaagtggcga gggtatatga gttttatgaa tcaggaagat
    13501 atcaagaagc tctatccatg gctgaagctg acccacaaat atctgcaatg tcttatggac
    13561 aggtattgat gggcaattgc tataagaaac tgggcagcaa aaattctgca atggctcatt
    13621 ggaaaaaggc tgttgaaata tcaccattag aacattccgc ttatattaat atagccaacg
    13681 agctctatga acagggcaat gctgcagaag ctattttaaa ctggcatact gctgcaacaa
    13741 ttgtgcctga aaatcccaca gtaaatttaa accttgctct tgcttatgac aaaaagggca
    13801 gtagaatcaa ggctacaaaa tattttgaaa agtatttgcg ctacgagaaa aaggtaaata
    13861 ctcagaatta tttaacaata aaacacacta ttagtaattt aacagctaaa gtggattttc
    13921 ttgccaaaaa agtagaggaa tttaagctga aaaaagacct taaaaccata gctgctctct
    13981 atttgaagat gattgcaact tatgctaatc ttcctaatat ctattccaat attgcagaaa
    14041 tattatattt tgacaggaac tttgaaaaag cacttgaatt ctatttgatt gtatatttaa
    14101 actatcctca caccccgaaa atattgcttg aaatagccaa tttgtattat gttttgcaaa
    14161 agcctgatta tgcctatgca ttctattcca gagcacttga tgtgctttct gaaggcacat
    14221 cttactattc caaaacaaag tcaaagctat cttctttatc ttatatatta agagatccgg
    14281 agcttattga gactcatttg caaaaagcaa gagaagcaga agctcaaaat gaatatgaaa
    14341 aagcaattga tgaatatgaa aactatttaa tattaacaga atcggataat cctgatatac
    14401 agcaattgat agacaaatat aagatttttt tgaatcctga accttttgta attaatgttt
    14461 tgtacaacca aattcctgat ttgatgaaca aaaaaaagct taatgcatgt gtagaattgt
    14521 gtgatagaat aatgactctt gcaacacaaa actctaaaga ggtaatatat gctatgaagt
    14581 gcaaatcaga atgcaaacgt ataattattg cgagagaaca attcggtgtt taaaaannta
    14641 aaaaattttt ttataaaaac atactcaaac gaacttatta cagaagcggc cactgtattg
    14701 gctgcggcga atgctgccgg caaatttatg tcaggcatgt aaaaaacgtt gtgcagactg
    14761 aggatgaatt ccaaaaacta agacttctcc atccttttta tacatattta aaaattgtcg
    14821 gcaaagatga tatagggcta atatttgaat gccagaatct cgataaagaa accaaccgtt
    14881 gtaaaatcca taaaaaaaga ccgggtatat gcaggcgtta tcctgtagaa gctattttta
    14941 tgatgggtgg tgaactgggc aaaaaatgcg gttataaatt tacgcctatt gaatcgtttg
    15001 atgaggtctt taacaattta aataaataaa ttgttaatcc tttttactac gtcgtgatta
    15061 acaacgttat gcactctcag tatattaact ccgttagcgg caagtttttc tgaaattata
    15121 gcggttgtaa tatcgagttt ttctttcgat tcagtgttta ttgtttcttt tataaagttt
    15181 tttcttgagt gacctataag tattgcacag cccagggttt tgaattcttg gattcttttt
    15241 aatatttcaa aattttgttc ggtagtttta ccaaatccta tacccggatc tattattatt
    15301 gagttttttg atattcctgc ttttgtaagc cggtctattt tttcgtctaa ataattatat
    15361 atatcatcca ctacgtctgt ataatctgta tttttttgca taatatccgg agaagcgctt
    15421 gaatgattta aaataacagg gcatttgtta tttactatta cattaagcat ttctttatcc
    15481 caatccagag cagatatgtc gttgattata tctgcaccgg cttttaaggc ttcttgtgca
    15541 gtttttgcgt ttcttgtatc tatgcttatt aatgtttttt tatctgtttg tctgattttt
    15601 tcgattacag gtattaccct gcatatctct tcttcaacag ttattttttg agaaaatggt
    15661 cttgttgatt ctcctccaat gtctatcata tcagcgccgt cttcaatcat tttcttgtaa
    15721 tggttgattg ctttttctgt tgtattgtat ttgcctccat cggagaaaga gtcaggcgta
    15781 aggtttaaaa tgcccataat ataaggcgtt ttccaatcca gtacaatatc tcttatcatc
    15841 agtgtctcgg gcttataaaa aagcgtgtca ctaatctggc ttgcaagaga tgaaagcttt
    15901 agcggttgat atttgagttt ttcgcatatt ttttctaact ggctgattgt cccgctcaag
    15961 atacaatctg aaagttctac tttcccagta atgacctgtt tatgcacagc acaatctgta
    16021 cctgttgaaa gtgcggtttg tttaaggata tttgcctgtg cacagttaag gtcatatatt
    16081 tttattgttc gaaatttgtg tttgtttatg ccttttttaa cataagcttt atcaaaacct
    16141 atatgtataa ggtcatcttc tttgcagttt ataagtttta ttttaaaatc atttcgcata
    16201 aatataagtt agcataaact tacattgtat caagcgcagc ttcaattgct tgcattgcaa
    16261 ctgcgttttt cttgatttca ttgcctttac cttggtacat atcaggtatt ccgtctttgt
    16321 ctttgtcctg ggtgcctttt tctacaacac caatacctga tgtaataccg gcaattgtac
    16381 ctgttaattt tttgataccg tttttcgcaa aagtctggac ttcaatagct tttgcatcaa
    16441 cagatttgct cttagcagca tttttagctg attcaattgc tttttcaatg tcaactttat
    16501 ccacaccttt ttgagcatat tctttgcacc agtttatacc gttattaaga gttctggaaa
    16561 caaagccttt aaatgttttt tcctctgaag gtgttacttt ttctgaaatt tttgagaata
    16621 attttgagcc ttctttacct gcccaatcca gcagtcctgt atttttttct gtgaagacta
    16681 aaagtttatt gtaaaaacct tttgtaacaa taccgcctaa agctgcgagt gataatgttg
    16741 tcatcatttg tttaaaaggt tttgtgtact tttcattttt gtctgtaaca ttaattgttt
    16801 cagcaaactc acctattttt tttgcagtgt cttcgttgaa attttttaaa tccaactcat
    16861 caagcaactc gcctgctgcc atatagtcca taggatattc aatcttgttt tcttctctat
    16921 ttccaaaatt gtgagaagtc ggtttgatag gtgaacaatt taatgaatga atttgtaaca
    16981 ttgtttaaac acactccggt attttattat ttacaattag tataatgctt gtaaatatat
    17041 tttttgctat cgtaaatgca gattattaat aaattgtaac atagatttta ataaatggaa
    17101 cagactgttt ggctaatatt tacaaaatta tgcaaaaaaa aagctgcact gcagcttata
    17161 cttcataatc ttgggaggag atttggggat ttgtacatgt atattaattc attatgaaaa
    17221 aaatgtttac tattttaatt gtaaatttaa taaaaattta caatcccttt aaaatcatgt
    17281 acgttttatg atatggctat ttctttttct ttggcatggg ggcgttaggt gtttttgtat
    17341 ttgaagtgcc ttgtatacgt tttaccgaaa taacttctgg aatggattga agctttgtta
    17401 ttactgtttt aagtctgtta atgttatcaa cttcaatgcc catctcaatt atgccgattt
    17461 tttttgcagg gttagactta atatttgcat atgcaatgtt ggtattacat tctgttaatt
    17521 caatcattac atcttttaaa atgccaattt tgtcctgtac atctatcctg attgatgcaa
    17581 catatgtttt gttaaggcct ttgtctgccc attttatgtc aatgagtctt tcttccggta
    17641 cattatccaa tgatgcacag tcaactctgt gtatcgaaac acccttgctt cttgtaacga
    17701 ctccgataat tggctcaccg ggtacaggtg tgcagcattt tgcaaagtag taaagcattc
    17761 cttccagccc gacaatatcg tttttggatt tctttgtttt tgaatgcgaa ataattggct
    17821 ggtctgtgtc gacggatttt tttattctgt ttgtaatttt atttacagta gtttctccat
    17881 agcccagtgc agcaagcagg tcatccacac aggagtaatt catagcttct gcaatttgct
    17941 tgagttcctg agattttaag atttcgtcaa acttggcctt tccaatctct gcctcaagca
    18001 tattgtggcc aatagtaata tgttcttcgc gtttattttt cttataccat tgttttattt
    18061 tagactgggc aagttttgta actacaaaat ttagccaatc taatcttgga gccggtgttt
    18121 ttgaggtcat aatttcaaca atatcaccgt tatgcagttt tgtgcttaaa gggcagattc
    18181 taccgtttac aagcgctcct gtgatgcgga agcccacatc tgtatggatt ctgaaagcaa
    18241 aatccacagg tgttgcgtct ttaggcaggt caattacgtc gcccatcggc gtaaaagcaa
    18301 aaacctgatc agagaataaa tccagtttaa cactttctac atattcgctt gcagaggaaa
    18361 cgtctttttc catttcggca agttttctca tccaggagaa ttgaatatct gtatctgcgt
    18421 tggctttttg agaacctttt tctttatatt tccagtgtgc agcnnnnnnn nnnnnnnnnn
    18481 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nncagcacag aggtatgcaa agaacggtaa
    18541 aggttacttt taggcattgc aatgtaatct ttaaaacggc cgggtattgg tttaaattgt
    18601 gaatgtataa ttccgagcac ctcgtagcac tcattaattg agttgactat tacgcgcact
    18661 gcggatatat cataaagctc gtggaatgcg atattctggc gtttcatttt tgcataaatt
    18721 gaataataat gttttgaacg tccggaaata gcggctttta ttttgtgctg tttgagcatc
    18781 tggcctattt tttcgaccaa aacctgtatt gttgcatctc tttctgcttt ttttagtgca
    18841 actaactgtg caatttcaaa atatttttca gggttgagat atcttaaaga taaatcttcc
    18901 agctctgctt taatttttcc gataccaagg cggttagcca gcggagcaaa tatgtccaag
    18961 gtttcttgtg caattttttg ttgttttgca gcggccatat aatttagcgt acgcatgtta
    19021 tgcagtctgt ctgccagttt caggaatata acacgtacat catttgccat tgcaatgaac
    19081 attcttctga aattctctgc ctgacgttct tctttagatt taaattgata tttgccgagt
    19141 tttgttacgc cttgcacaag gtttaggaca tcttcgccga atttttcttt aattgtttcg
    19201 ggtgcagtgc ctgtatcttc aataatatcg tgcagtaaag cagcaatgat tgtgtgttta
    19261 tccatcatca agtcagttaa aatcttagcg acttcaaccg ggtggataat atagggttct
    19321 tcacttattc tgtattggcc ggcatgcaat tttgcagcaa atacaaaggc ttcttctatt
    19381 tcattaatat cctgctgagg cctgtgctgg tttagcagca tttctttcaa tggttcaaat
    19441 atactgaaat caagagcagg ttccgtatct tcctgcatct gctcaggcag ttcataatct
    19501 tctgatttgt cttctgtgtt gtctgtcata gttaattatt gtacactttt aacggttact
    19561 taacaagagg cattattatg gaaagttgtg cacacgaatt ttataaagag caaaacaata
    19621 cacttgtgct gaaaataaaa gctgttccaa attcttccaa aaacgaaata tgcggacttt
    19681 ttgatgatgc tttgaaagtt aaaataaaag caccggctgt tgagaacaaa gcaaatgagg
    19741 agcttgtann nccaaaagca gtgttatttt aaaatccggc ggcacttcaa aactaaaaac
    19801 tatctgtata gaaaactgta ctattgataa atttaaacag gtttgtgtta atattgattt
    19861 ataaatacta gaaaagggaa aaatatgatt acaactatat tttggatagt acaaataatt
    19921 tcgtcacttt tattgatttt acttgttatg attcactcac caaaaggtga cggcatcgca
    19981 ggtattggcg gagcgtcgca tgtttttgct tctcaaaaaa atgcagaatc cggattaaat
    20041 aagctgacaa tgtgggttgc aattgtattt tttgtatcca cttttattgc agggtttaaa
    20101 atttttggtt agatagaaaa tattccttca agttttcttg caaaccggac aataggtttt
    20161 tcttcctgcc agcttataga gtctacaagc actgttttgc agcccagtaa tttaccgaaa
    20221 agaatatcgg ttaaaggtct gtcgcctatc attaccatgg attttttatc aacattgttt
    20281 tcatttaaaa attctttggc cactttagta agcggttttt ttgcatggaa aagcattgga
    20341 atatctgtct gagttattac tttgttaatg taatccagat tactattgtt ggatattatt
    20401 acaatggaaa aatccttttt caaattatca aacaactgta gtgtttcctc ggcaaacact
    20461 cctgattttg atttcattac tgtgctgtcc aagtcaaatg cgattgtttt tatgccgtct
    20521 tctttgagtt tgtcgtagtt tatttcaaaa acagttttgg ctttataatc aggtcttact
    20581 atcatctttc gttttttatt cctaatgttc ttgcaagtgc gtatttgtaa ttttgaggtt
    20641 ctacagataa ctcaacccat atttcatcat ttgtgttgcc aacttctttt tcctcatcaa
    20701 gagtaatatt atagattttt tcaacggttg tttcaaaaca ctcatttggt gtaataactt
    20761 caacaacatt gttttttaat attttatttt taattttgac tttataaata tttttgtcgt
    20821 cttttgttga tttatcccag aactcaaaaa gaaaatcaga acccgcaaga ccttttgata
    20881 cgtcgtagct gtagccttca tggtcttgtt catcaagata aaaacctgtt gtatatcctc
    20941 tgttgccgat ttttagcaat tgattgaaca tttccttttc atcgattttt tcgttattgt
    21001 aataagcatc aattgcgcgt ctgtatgctt ttgcaacggc tgaaacgtag taaaggcttt
    21061 ttgttcgacc ctctatttta aaagaatctg ctcctgcttc gataagtttt ggaatgtagt
    21121 ttatcaaagc aaggtctttt gtactcaaga tatgagtgcc tcttgctgtt tcttctattt
    21181 cgtagtattc accggggcgt gtttcttcca gaagtttgta tttccatctg caaggctgtg
    21241 agcagcctcc gtggtttgct ttcctttcac cgtgagtcat gtaatcgctt aacaaacatc
    21301 tgccggaaag cgagacacac tgtgctccgt gtacaaaaac ttccagctca atatcaggta
    21361 cattttttct tatttgtgca agctgcttta ttgacagctc tcttgcaagg attactcttg
    21421 ttgcaccaaa atcacgccag aatttaacag cttctgagtt aagagtgtta gtttgggtgc
    21481 ttatgtgtat atctatatca ggaagtttgg ttttaagtat gttcaagata ccaaaatcac
    21541 taacaatcaa agcatcgggt tttgcatctt taataatatc tatattttca tgcaaatttt
    21601 ttaaatcttc atcatatgca tagatattta gcgtcatata tacttttttg ttataagaat
    21661 gagctgtatc tattgctctt ttgaggtttt ctgcagtgat aacatcgcct tttctcattg
    21721 ttctgaggct gaagtccacc atacccatat aaacagcatc tgcgccgtaa ttgattgcat
    21781 aatccagttt ttcaatattc cctgctggaa gtaataattc aactctcttg ttcataatat
    21841 ttatatttta ttacaaacat cagattttaa aaatccagat ttaatgcact gttgaggtca
    21901 gtatctgtgc cgtctgtaat ttttttgtat tccattactt tgtcgagttt ttcgcagctc
    21961 tgtttaaacc cgtttgtttg ttcgtttgca gtgatttctg ttgtaaaata tttttcattt
    22021 tttgaaaaac ctatttcttt gtaaaaatca ttgcagtttt tgcctctggg tgtaagcttg
    22081 tctggtacaa gccttgcaag ttttttattt tcttctgcgc ccttgcccaa aatatgtcta
    22141 aaaattgact taccggcacc tttagttcct tcatttggtg ccagcggcca ggatgctgca
    22201 tggtcgatat aaaagccttg attactattt atgtccgaaa aagataatat tgcacaaggt
    22261 ttgttttttc ttgctgcaag aaaacctttt gcgccgaatt ctatattgct tattgctcca
    22321 aaaatcatat ctttccattt gttaaaatcc tttttttcgg gaagattcgg atacattttt
    22381 tcaagattaa ttttctcaaa catcttattt aaaaaaggta aatcctcttt ggaaagctgg
    22441 attatggtta tttcatcgca ggccggtaaa ttttttagtc tgatttttgc aacaggcaaa
    22501 cctttgaatg ctgtagcatt atttattttt ttatatcctg tttctctgtt ttggatttgc
    22561 acagttgctc ctttcctgat tataataggt gcctcaagct attaaattgc ttttttgcct
    22621 tacaatcttt acatcatgta atatattttg tacttttt
//
LOCUS       DABS01000187            3977 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_3117, whole genome shotgun sequence.
ACCESSION   DABS01000187 DABS01000000
VERSION     DABS01000187.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3977)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3977)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3977
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            65..703
                     /locus_tag="CPT85_08590"
                     /pseudo
     CDS             65..703
                     /locus_tag="CPT85_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018544085.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing start; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase"
     gene            696..1199
                     /locus_tag="CPT85_08595"
     CDS             696..1199
                     /locus_tag="CPT85_08595"
                     /EC_number="3.1.3.45"
                     /inference="COORDINATES: protein motif:HMM:PF08282.10"
                     /note="forms homotetramers; catalyzes hydrolysis of KDO
                     8-P to KDO and inorganic phosphate; functions in
                     lipopolysaccharide biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonate 8-phosphate
                     phosphatase"
                     /protein_id="DAB21005.1"
                     /translation="MYKTLNLSSGIKLIVSDFDGIFTDNSVYILNENSRLKKLSYKDL
                     MGVSIAVKNGINVAIISGEQSKEIDYVAGKFNLEDIHQGIRIKCPILDDLKKKYNLKD
                     EEILYVGDDINDIECLNSVKYAITVEDANYKVKQIPHIQITKANAGNGAFREIVDNII
                     ALRENEK"
     gene            1189..2895
                     /locus_tag="CPT85_08600"
     CDS             1189..2895
                     /locus_tag="CPT85_08600"
                     /inference="COORDINATES: protein motif:HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB21006.1"
                     /translation="MKNKILFLGEEIKKQIEKFDRFVNNYDDVSQTTQIPSSAYMNWA
                     VNLAQNGNMEDAMEKLETASLMPNQNPGVYINLGIALLRQKNFEEAIKNFRKAVKIDK
                     FNSRAYSMWASALSEIGDLKGAVDIYKIAQKYDPRDPDIYLNWGVSLARAGKQEEAKA
                     KFKKSVSLNPLNPVTPFLWGLILLEQQDYKDAISKFNHSLIYTDNKYDALYYIALCYI
                     KLGDYKFAQEYAQKALDVDNSKVDSYIILADCYLNTCQEQKCLDIFNMAEKNAQTNTQ
                     FYTNWGLALQKYNYIDQAREKFYRSLMLEPNQELVLFNLGVNFLLSKEVTXFNKVLEI
                     NPSHPLALFNLAAIAYNNGDFSTALELYKSSYENDKKNYHLSFNIAGCYYQKGDMENA
                     RAYYKKCIEYCPKFVQAYISFANLLLEIGEPQEALRKARTAFLMDKDSAYTNFAFGII
                     LMRLGSYDDALEKFWGAIKIDNGYLLAYLAIAETYLLKKDYEKSLETLESINAESKEL
                     PEFLEVQQRVLEAAVNDVEISQSVSNYAIQYCNKFLELYNNDKVQGIKNILVDKCRFE
                     AN"
     assembly_gap    2167..2168
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2898..>3977
                     /locus_tag="CPT85_08605"
     CDS             2898..>3977
                     /locus_tag="CPT85_08605"
                     /inference="COORDINATES: protein motif:HMM:PRK06635.1-4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="DAB21007.1"
                     /translation="MGIIVQKFGGTSVADTDKIKNVASAVIREKKNGNDVIVVVSAMG
                     HTTDYLVKMARDITSCPNSREMDMLLATGEQVSIALLTMAIQAQGYAAVSMNAMQVGI
                     ITECVHSKARIVDIKTNKLKEHLDKGEIIVVAGFQGVTPDGEITTLGRGGSDTSAVAI
                     AGAMNADRCDIYTDVEGVYTTDPRIVPCATKLKEISYEEMLELAHVGANVLHPRSVET
                     AKQYQVPLRVRSTFKLDDLGTYIIGVDEMEIYKPVAGVASDLSQIRVVITEVPDRPGN
                     AAKIFEMLSKSDISVDMIIQSYGRSDDTNDIAFTVCRSDYERTMELVKDIIKEINASG
                     VLVDEDIAKVSIVGAGMVDRPGIAAS"
BASE COUNT         1379 a          602 c          800 g         1194 t
ORIGIN      
        1 cgaagaactt gatgtttaca ggccaaatta ctacggaaat accaatagag atttaaaact
       61 cgggttagaa tttagtttag aagattacaa agagattgat tcttattgta aagctaaaaa
      121 aataatgtgg tttgcttctt gctgggattt agactctgtt gattttattg aacagtttga
      181 tgttccctgt cataaaattg catctgctct tttgaccgat gatgaaatgc tgttgcgtct
      241 taaaaagacg aacaaaccta ttttgctttc taccggtatg agctcaatgg aagagataag
      301 acatgccgta aaggtgctgg gcgaagaaaa tcttgttata ttccactgca catctacata
      361 tccgacagag cacaaggaaa tcaaccttcg tgtaatagaa gaactaagaa aagaatttaa
      421 ttgtcctatc ggatacagcg gacatgaaaa aggtcttttg ccttctatac tgtctgttca
      481 gcttggtgct tgttctgtag aaagacacat tacaatagac agaacattat ggggctctga
      541 tcaggctgcc agccttgaac cagaaggatt aagacgtatg gttcgtgata tcagagaagt
      601 aaaagttgtt cttggcgacg gtaaaaaaat agtctatgat tctgaattgc ctgttcgtaa
      661 aaaattaaga aaatcatcaa aggtattggt tgaaaatgta taagacactt aatttatcct
      721 ctggtataaa actgattgta agtgactttg acggcatttt tacagacaat tcggtttata
      781 ttttaaatga aaattcaaga cttaaaaagc tcagctataa agatcttatg ggggtttcaa
      841 ttgcagtaaa aaatggaatc aatgttgcaa ttatttcggg tgaacaaagc aaagagattg
      901 attatgttgc aggaaagttt aatcttgaag acatccatca gggaattagg ataaagtgcc
      961 cgatacttga cgatttaaag aaaaaatata atttaaaaga tgaagaaata ttatacgttg
     1021 gtgatgatat taatgacatt gagtgcctca atagtgtaaa atatgctata actgtagaag
     1081 atgcaaatta caaagtaaag caaatccctc atatacaaat tacaaaagca aatgcaggca
     1141 acggggcttt tagagaaata gtggataaca taattgcgtt aagagaaaat gaaaaataaa
     1201 attttattct tgggcgaaga aattaaaaaa caaatagaaa aatttgacag atttgtaaat
     1261 aattacgatg acgtttctca aacgacccaa attccttctt ctgcttatat gaactgggct
     1321 gttaaccttg cacaaaacgg taatatggaa gatgcaatgg aaaagctcga aacagcatct
     1381 cttatgccta atcaaaatcc cggagtttat ataaatcttg gtattgctct tttgagacag
     1441 aaaaattttg aagaagcaat aaaaaatttt agaaaagcag ttaagattga taaatttaat
     1501 tcaagagctt attcaatgtg ggcttcggct ttatctgaaa taggtgattt gaaaggtgct
     1561 gttgatatat acaaaattgc tcaaaaatat gaccccagag acccagatat atatttaaac
     1621 tggggtgttt cacttgcaag agcaggaaaa caagaagagg caaaagcaaa gtttaaaaaa
     1681 tcggtttctt taaatcctct caatccggtc actccttttt tatgggggct tatattgttg
     1741 gagcagcagg attataaaga cgcaatatca aaatttaatc acagccttat ttatacagac
     1801 aataagtacg atgcacttta ttatattgca ttgtgttata taaaactcgg tgattataaa
     1861 tttgctcaag aatatgctca aaaagcgctt gatgttgata attccaaagt tgattcatac
     1921 attatactgg cggattgtta tctcaatacc tgtcaggagc aaaaatgtct tgatattttt
     1981 aatatggctg aaaaaaatgc acaaactaac acacagtttt atacaaactg gggtttggcg
     2041 cttcaaaaat acaactatat agatcaagca cgtgaaaaat tctacagatc tttgatgctt
     2101 gagcctaatc aagaacttgt gttatttaat cttggtgtta attttctttt gagtaaggaa
     2161 gttaccnntt ttaacaaagt acttgaaatt aatccgtctc atcctcttgc cttgtttaat
     2221 cttgcagcaa tagcttataa caatggggat ttttcaactg cattagagtt gtacaaaagc
     2281 tcttatgaaa atgataaaaa aaactatcac ctttctttta atattgccgg ctgctattac
     2341 cagaaaggtg atatggaaaa tgccagagcg tattataaaa aatgtattga atattgtcct
     2401 aaatttgttc aggcatatat aagctttgct aatctgcttt tggaaattgg cgaaccacaa
     2461 gaagctttaa gaaaagcaag aacagccttt ttgatggaca aagattctgc ttataccaat
     2521 tttgcgtttg gtattatatt gatgcgcctt ggcagctatg atgacgcatt agaaaaattt
     2581 tggggtgcta taaaaatcga taacggttat cttttggcgt acctggctat tgcagaaact
     2641 tatcttttga aaaaagacta cgaaaaatca ctggaaactc ttgaatctat aaatgcagaa
     2701 tcgaaagagt tgccggaatt tttagaagtg cagcaaagag tacttgaggc agctgtaaat
     2761 gatgtcgaaa tatcacaatc ggtatcaaat tatgctattc aatattgtaa taaattctta
     2821 gagctgtata ataacgataa ggtacagggc ataaaaaata ttttagtaga taaatgcaga
     2881 tttgaggcaa attaaaagtg ggtataatag ttcaaaaatt tggcggtaca tctgttgcag
     2941 atacagataa aatcaaaaat gttgcatctg ccgtaatacg tgaaaaaaag aatggcaatg
     3001 atgtaattgt agttgtctct gcaatgggac acacaacaga ttaccttgtt aaaatggcca
     3061 gagatataac atcctgcccc aactcacgag agatggacat gctgcttgca acaggtgaac
     3121 aggtttctat tgcgttactg acaatggcta ttcaggcaca gggctatgct gcggtgagta
     3181 tgaatgctat gcaggtgggt attattacag aatgtgtcca ttcaaaagca agaattgttg
     3241 atatcaaaac aaacaaactc aaagaacacc ttgataaagg tgaaataatt gttgttgccg
     3301 gttttcaagg ggttactccg gatggagaaa taactactct tggcagaggc ggttctgata
     3361 catcagctgt tgcaattgcc ggtgcaatga atgctgatag atgtgatatt tatacggatg
     3421 ttgaaggcgt ttatactaca gacccaagaa ttgtgccgtg tgcaacaaaa ttaaaagaaa
     3481 tatcatatga agaaatgttg gagcttgcgc atgtgggagc aaatgtctta catcctcgtt
     3541 ctgttgaaac tgcaaaacaa tatcaggtgc ctttgagggt tagaagcacc tttaaattag
     3601 atgatttagg aacttatata ataggagttg acgaaatgga aatttataaa ccggtcgcag
     3661 gggttgcttc cgatttgtct caaatcagag ttgttataac agaagtgcca gatagacccg
     3721 gcaatgctgc aaagattttt gaaatgctgt caaaatctga tataagcgtt gatatgatta
     3781 ttcaatctta tggcagaagc gatgacacca acgatatagc atttaccgta tgccgttctg
     3841 actatgaaag aaccatggaa ttggttaaag acattattaa agaaatcaat gcctcggggg
     3901 ttcttgttga tgaggatatt gcaaaggtct ctatcgtagg tgccggcatg gttgaccgtc
     3961 ctggtattgc tgcttca
//
LOCUS       DABS01000188            3203 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12820, whole genome shotgun sequence.
ACCESSION   DABS01000188 DABS01000000
VERSION     DABS01000188.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3203)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3203)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3203
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..410)
                     /locus_tag="CPT85_08610"
     CDS             complement(<1..410)
                     /locus_tag="CPT85_08610"
                     /inference="COORDINATES: protein motif:HMM:PF01252.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20990.1"
                     /translation="MLSAKQKKILLFSLLTFIFAVISLLLRDLLISNCNNTDFKLFTI
                     DYIKNYGAAFSLFHTHTSFLIVVSSAILLLALFYIYKFICEFSRSDLFFSALLCAGII
                     CNLSERIIDGFVTDYIRLNFVVFPIFNISDMFIS"
     gene            complement(410..1141)
                     /locus_tag="CPT85_08615"
     CDS             complement(410..1141)
                     /locus_tag="CPT85_08615"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20991.1"
                     /translation="MHDATYRSSDGYDKERLKELAQESWKEFPDVRYTIKVLSIDVDV
                     DNATVITKERLSGTTQTAVEFVKGSGYIDSESTAIYYLKRFSNEWRITSDFVVNEKTA
                     MRYGIAKYIPMKLDAPSIVSPKEEYTAVLKLNVPRSYVALISINNEPITFPFEKSTEV
                     FRSLKPCGIQERILTSNDGSKNENAVASVGIAKPNIKDDNINVNILGIAFLSSRVNVV
                     KHKMDNVAPLTQKNVNAAIKDSESK"
     assembly_gap    1280..1281
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1482..2255
                     /locus_tag="CPT85_08620"
     CDS             1482..2255
                     /locus_tag="CPT85_08620"
                     /inference="COORDINATES: protein motif:HMM:PRK13321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantothenate kinase"
                     /protein_id="DAB20992.1"
                     /translation="MLLTLDIGNTSTTIGLFDNDKLVETWSIASEKHRSEDEIGMLLL
                     NLLKFNNYDKNVDYACMCSVVVCLTERYKNALKKYLYIDPFVVSNKTTNMLNYCVDYP
                     EEVGPDRIVNAFAAYSLYKKTCIVVDMGTATSFDIVKGNGDFLGGIICAGMKIQAESL
                     KKFTSKLPLIKIEAPSNAIGKNTIDAMLSGIVRGHACMIDGLIKECEAELGEKAVVIA
                     TGGYSDIVAQYMERKFDCINPTITLEGLKIVYDAHVLPV"
     gene            2348..2587
                     /locus_tag="CPT85_08625"
     CDS             2348..2587
                     /locus_tag="CPT85_08625"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20993.1"
                     /translation="MLSIISDLYTPQTNGEISPSIMQNWTQQAIECYEINSDCSKCSL
                     AGGNYSFICQMPKIVKALLKEYGEPNNCFKQISNF"
     gene            complement(2593..2940)
                     /locus_tag="CPT85_08630"
     CDS             complement(2593..2940)
                     /locus_tag="CPT85_08630"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20994.1"
                     /translation="MKKKLLTVITAFIMALMVSMPCCCAVEQPKAADTQPQIVQKKHK
                     EDRNEAKNVLTKFLITMLWVGGSCLVIFLILYAYKNLKKSNIVNHGQIDIAKNLNSPE
                     SIEDATKFFIEKF"
     gene            complement(2944..>3203)
                     /locus_tag="CPT85_08635"
     CDS             complement(2944..>3203)
                     /locus_tag="CPT85_08635"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20995.1"
                     /translation="AETVEDKPAKPTRKRTSRRTKKAEEPQVAEAVTAEEVKKPEEET
                     ASVQTTEESKPVKKTKTRKASRTRKKAPEQTEAKEPAEANA"
BASE COUNT          987 a          531 c          538 g         1145 t
ORIGIN      
        1 atactaatga acatgtcaga gatattgaaa atagggaaca caacaaagtt taatcttata
       61 taatcagtta caaaaccgtc aataatgcgc tctgaaaggt tgcagataat gcccgcacat
      121 aaaagtgctg aaaaaaacaa gtctgaacgt gaaaattcac aaataaattt gtaaatataa
      181 aacaaagcca aaagcaatat ggcagaagat actacaatca gaaatgacgt gtgtgtatgg
      241 aacagactaa aggctgctcc gtaatttttt atataatcta tggtaaacag tttaaaatca
      301 gtattattgc agttagatat gagtaaatcc ctcaataata atgaaataac tgcaaaaata
      361 aatgttaata atgaaaataa taatatcttt ttttgtttag cgctcaacat tatttacttt
      421 cactgtcctt tattgctgcg ttgacatttt tttgtgtaag aggtgcaaca ttatccattt
      481 tgtgtttaac aacatttact ctgctggata aaaatgcgat acctaaaatg tttacattga
      541 tgttgtcatc ttttatatta ggttttgcta ttccaacaga ggctactgca ttttcgtttt
      601 ttgaaccgtc attactagta agtattcttt cttgtatacc acagggtttc aagcttctga
      661 acacttctgt gcttttttca aacgggaaag ttattggttc attatttatt gaaatcaagg
      721 ctacataaga tcttggcaca tttagtttta acacggctgt atactcttct ttgggagaaa
      781 caatagaagg tgcgtcaagt ttcataggga tatactttgc aataccgtat ctcatagctg
      841 ttttttcatt tacaacaaaa tccgatgtaa tgcgccattc gttagaaaat cttttaagat
      901 aatatattgc agtggattca gaatcaatat atccagatcc ttttacaaat tccacagctg
      961 tttgtgttgt gcctgaaagc ctctcttttg tgatgacagt tgcattatca acatctacat
     1021 caatagacaa cacttttatt gtatatctta catcagggaa ttctttccag gattcttgtg
     1081 caagctcttt caggcgttct ttgtcatacc cgtcagagct tctgtatgtt gcatcatgca
     1141 aggataaaaa accttcaaga ttcttgttat ttgtatattt ttgatagtcc gaaaatatat
     1201 tttttatttg tattgttgga tcaatgtcat ttttcttgtg gaaacctata ccagcaagtt
     1261 caacagcaaa attttctttn nttttactgt ttgtttttca catgcttttt cttttgcaaa
     1321 ggattgcatt tgtatcatta atgccattaa aatagctgat attattacga tttttctcat
     1381 tttttctctc tttttacctt ttgaaaatat tatatcaaaa attcatattt cgcaggaagt
     1441 atttaatatt atttttttgt taaaatatta ttgaggtaaa tatgctatta acactggaca
     1501 taggaaacac atctactaca atcggcttat tcgacaatga taaacttgtc gaaacatggt
     1561 caattgcttc agaaaagcat cgttccgagg acgaaatcgg aatgctttta ttgaatctgc
     1621 ttaaatttaa taattatgat aaaaatgttg actatgcgtg catgtgcagc gttgttgttt
     1681 gtcttacaga gcgttacaaa aatgcattaa aaaaatattt gtacatagat ccgtttgtag
     1741 tttccaacaa aacgactaac atgctgaatt attgtgtcga ttaccctgaa gaagtcgggc
     1801 cagacagaat tgttaatgct tttgcagcat acagccttta taaaaaaaca tgcattgttg
     1861 ttgatatggg tactgcaaca tcttttgaca tagtaaaagg taatggtgat tttctaggtg
     1921 gcataatttg tgcaggaatg aagatacaag cggaaagtct caaaaaattt acttcaaaac
     1981 tcccattaat taaaatcgag gcacccagca atgccattgg gaaaaatact attgatgcaa
     2041 tgctttcagg tatagttcgt ggtcatgcct gcatgataga cggcctaatc aaagagtgtg
     2101 aagcagagct tggtgaaaaa gctgttgtaa tagctactgg cggatactcg gatatagtgg
     2161 cacagtatat ggaaagaaaa tttgactgta ttaaccctac aattacttta gaggggttga
     2221 aaatagtata tgatgcccat gtactaccag tgtagaaata tcctccaaaa aaccgagtaa
     2281 atatcccttt tcatgattta tagtaaaaac atggggtatt aaagtgtgtt ttgactggag
     2341 gagtaatatg ttgtcaatta tttctgattt gtatacaccg caaacaaacg gcgaaatttc
     2401 tccatctatt atgcaaaact ggacacaaca ggcaatagaa tgctatgaga tcaattctga
     2461 ttgctcaaaa tgttctttgg caggtggaaa ttattcattt atctgccaaa tgccaaaaat
     2521 agttaaggct cttttaaaag aatacggtga gccgaacaac tgctttaaac aaatatcaaa
     2581 tttttaatcc atttaaaatt tttctatgaa aaactttgtt gcatcttcaa tactctcagg
     2641 cgagttgaga ttctttgcaa tatcaatttg accatggtta acgatgttag atttctttaa
     2701 atttttataa gcatataaaa tcaaaaatat aacaagacac gacccgccaa cccatagcat
     2761 tgttatcaaa aattttgtta acacattttt tgcttcattt ctgtcttctt tatgcttttt
     2821 ttgcacaatt tgtggttgag tgtcagcagc ttttggttgt tcaacagcac aacagcatgg
     2881 cattgaaacc atcaatgcca ttataaaagc tgttattact gttaataatt ttttcttcat
     2941 attttatgca tttgcttctg caggttcctt cgcttctgtt tgctcaggag ctttttttct
     3001 tgttcttgaa gcttttcttg tttttgtttt ctttacaggt ttagattctt ccgttgtttg
     3061 tacagatgct gtttcttctt caggtttctt gacttcctca gctgttacag cttctgcaac
     3121 ttgaggctcc tcagctttct tggtccttct tgaagttctc tttctggttg gttttgccgg
     3181 tttatcttct accgtttccg cag
//
LOCUS       DABS01000189            8563 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13810, whole genome shotgun sequence.
ACCESSION   DABS01000189 DABS01000000
VERSION     DABS01000189.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8563)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8563)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8563
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..579)
                     /locus_tag="CPT85_08640"
     CDS             complement(<1..579)
                     /locus_tag="CPT85_08640"
                     /inference="COORDINATES: protein motif:HMM:PF01743.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[cytidine(C)-cytidine(C)-adenosine (A)]-adding
                     enzyme"
                     /protein_id="DAB20971.1"
                     /translation="MIKQKVANNPVISLIKPFFIDKHAQAYIVGGFLRDCLLNKTSCD
                     IDIVIENGSAKKLSQELADTINGYFIELDDVNKIYRVVFSDKVTYVDIADCTGNCIED
                     DLKRRDFTVNALAYDIKNDCLIDVTGGYDDLKAGLIKEISKENIIDDPIRILRAFRFQ
                     STLGFDLSNSLNQIIKEHALLLNNPAKERVNLD"
     gene            complement(572..1312)
                     /locus_tag="CPT85_08645"
     CDS             complement(572..1312)
                     /locus_tag="CPT85_08645"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20972.1"
                     /translation="MPHFFISTGDINQDIITVSDKENFHHIARVLRSKVGETLLLVDE
                     NRTQYKVVIQNIDSKSITTKVVETLKANHCLDLSLYLVQSVLKTDAQNFVMQKATELG
                     IKKIIPVITDNSVIKPSVADSKIDKWQKIANEAVKQCERVDFPMVEQRTTIEQVLNNQ
                     DFDIKIACVERTHTMTLKECLRNIKIKSDTKIAVIIGPEGGFSAREIELLNRHENVYK
                     VSLGKMILRAETAVISALSNVIYELEND"
     gene            1516..2457
                     /locus_tag="CPT85_08650"
     CDS             1516..2457
                     /locus_tag="CPT85_08650"
                     /inference="COORDINATES: protein motif:HMM:PF00669.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin FliC"
                     /protein_id="DAB20973.1"
                     /translation="MSLFVNTNINSLIAQRSLNSANSSLQSAITRLSTGYRVNQAGDD
                     AAGLCVAQGLDTQIRGNKRAMLNVEDGLNMMYIAEGGMSGVTEDLQRIRELCIQAANG
                     IYSPDQQQTLMNEIKQRLEDIDVIANSTVFNGLQLANGSMQAAGKSIVLQSGSGSDAA
                     NNTIDISSALTNMLCTSLGISLDIVSMTDAVTSLGDDYLDAGVYDPANPPKVNGNNWD
                     NAAIRAYIDKLDTAIDKISQDRSMLGAYQNRLQSTSENLTVMNENYERSKSQIMDADM
                     AEESANMVKYQVLQQTSAAMLAQANQIPSITLQLLGQ"
     gene            complement(2568..4070)
                     /locus_tag="CPT85_08655"
     CDS             complement(2568..4070)
                     /locus_tag="CPT85_08655"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20974.1"
                     /translation="MKRILSTMADMTEVSNFDELNFLWEISDILAGVNDAALLLDGLK
                     TIFEKYLSVNNFQIFIKDESTSTLRDFVKDWIIIEKNQQQELVENIFNKLKSSYNKGF
                     ILNNKLLKYDKKLSTTFCDTLKQDKNLLYFPVFNEKKLIGVIEINFDTFSQNIEKTQF
                     LTSLRIAVSQIATVIVNKILNKHLCVHIKFQNVMKSIAKLIETQFELDYILPIIGELI
                     DRFVSEHLIYIFIKDANNKYKLFWPLDCQDEKVLSLLPKLTDKKANVISKDGKTGLFA
                     IRNEDKTIGVIAASSNIDKLSKTDIDYLCQLSAQASVTTQRANAYAQVLKFATLDALT
                     GLNNRRQFEVRLKQEVANARRNKKPLCCIMLDIDYFKHVNDTWGHSAGDCVLKNVAKI
                     VAHELREYDIASRYGGEEFCILLPDTKIKEAAFVAQRLRKAVETADINISDDQVLGTD
                     FLNVTISVGVSEFDMSFETPEKLHQSADIALYEAKKRGRNRVVIFDESFS"
     gene            complement(4024..5196)
                     /locus_tag="CPT85_08660"
     CDS             complement(4024..5196)
                     /locus_tag="CPT85_08660"
                     /inference="COORDINATES: protein motif:HMM:PF13181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20975.1"
                     /translation="MRFLKKLFKKTVPKVIAGIFILVFLLSIFVFWGWYVKQVNKLWG
                     LYYVNEGDKAYRSHKLEKAIKFYKQGLEKYPEHSLARCNLGNIYVKYEDYYSAVEQYE
                     EALKYDPKFIVCRMNLGIVSAEKLSDFDKAIREYQTIIDTNRVTVHIPLIFDSVKSTR
                     ENKTIAWYNMGLAYRGKSMLLGEKTHASNDYLEKAIDAYKKALKRKKNSYNINYNYAL
                     ANHIFGNYKEAGLSYCKAIEEEPMAFDAHYNLAILLRKLGKLRESQEELEKAMLIVNT
                     QQNPYIAKYIFDIYSEVVEKSTIQNEFKTTQRGIAPESQIKEGMKTPHIVSEEVENED
                     DPLGVNHITYVNGKVVADSEEADKFMKKSFKKCTAKKIFEEYEEDTLYNGRYDRSF"
     gene            complement(5240..6682)
                     /locus_tag="CPT85_08665"
     CDS             complement(5240..6682)
                     /locus_tag="CPT85_08665"
                     /inference="COORDINATES: protein motif:HMM:PF13231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20976.1"
                     /translation="MDRTKNKVIFYITLGLLVAAGVLFRVLFFSYARPFWNDECALAL
                     NLLNRNFIQLFAPLDFSQVTPPLYACVCKFCAVFSKQHEIAFRLPSLIFGLLSVIVFC
                     LLSLKTLKSKAAVLFANMLFVLNYQLIYFSQELKHYACDVFCFCVILLFVFYVDKIKD
                     NFKLLVATGMVFALSVWFSYTASFALFAVFLILQKLSKKQLFALFVLPGFSLVLFAIY
                     TFRLHTDGFLNDFWTQGFIAKNFSNILSLCAANLAYYFEDFKAKIIIVIMFVAGLYVL
                     FKNIKVKRNLVLAIPFLTAFALSYFKIYPLYLRTAIYLFPVFVLVLSLAFQNLWCKRK
                     PVYIFASIVLGMMFFMSSIATDYRLILQKHYYREDTKNLLQLFEKESNNKCTLIVPYS
                     SSINFEYYKNSVSDPSQNIYVLKTPLYEQRQIKEVYDLLPCNRCYYILFTHSADKPYV
                     FKNLSAYAGLQKNARVFSDEHYNALIKFEK"
     gene            6748..7275
                     /locus_tag="CPT85_08670"
     CDS             6748..7275
                     /locus_tag="CPT85_08670"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="DAB20977.1"
                     /translation="MISNVCVFASSCNFLDESYYTEAAELGRMLAESGMDMIYGGSCL
                     GLMWACAKXKEVKDNGRRLIGVMPEKLKEMDVFSDYCDEFFLTPCMRSRKAKMDELSE
                     ALIALPGGFGTLEELSEMIVQKQLGYNNKAIVILNTNGFYNNLLNFFDDIIEQKFANK
                     KAQNLYFIAXXQKKP"
     assembly_gap    6904..6905
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    7257..7258
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(7344..7871)
                     /locus_tag="CPT85_08675"
     CDS             complement(7344..7871)
                     /locus_tag="CPT85_08675"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20978.1"
                     /translation="MPDDMNIDAYITSPYSSDLKKQRDAAFDSARNIRKVTETPEEYR
                     IRMAQQEMAHKEQLKNENTDVLQQRLANIDIANIATKNRAAIENMIREAESIKYFALY
                     NNYDMSAIDFRNLDKAVKAAQLRLQSLKKGEDKRDIGTGIFADTYRKSTKNDSILDKL
                     LGGNSKQNNNNRILF"
     gene            complement(7946..8455)
                     /locus_tag="CPT85_08680"
     CDS             complement(7946..8455)
                     /locus_tag="CPT85_08680"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20979.1"
                     /translation="MKKFFALLVILLAVAGYAYAVGMDNYYYTTVDQIFDAVNPGAYG
                     SYKCDNTTTETFKDYENKMRTRKIENTCEVVRLKTGTKIYGDCGLGTNEIIRRIKAGK
                     CTFEKDTSVIYKCQKGYSICRVAKYADGTASASCDTKYKDGSVQTELNKTGEDVQEIL
                     RTWWCTTKF"
BASE COUNT         2745 a         1569 c         1403 g         2842 t
ORIGIN      
        1 gtctaaatta acacgttcct ttgcagggtt gttcagaagc aatgcatgct ctttaataat
       61 ctgattaagg ctgtttgaaa gatcaaaccc taacgtactt tgaaaacgaa aagcacgtaa
      121 tattcttatg gggtcatcta ttatattttc ttttgaaatc tcttttatta agcctgcttt
      181 taaatcatca tacccgcctg taacatctat cagacagtcg tttttaatat cataagccag
      241 agcattaaca gtaaaatctc tgcgttttaa atcgtcttca atacagttac ccgtacaatc
      301 tgcaatatcc acgtatgtaa ccttgtctga aaaaacaaca cgataaattt tgtttacatc
      361 atcgagctcg ataaagtatc cgtttatggt gtctgcaagc tcttgagaaa gctttttggc
      421 agaaccgttc tcaatcacaa tatcaatgtc acagcttgtc ttattaagca gacagtccct
      481 taaaaaaccg ccaacaatat aagcctgagc atgcttatct ataaaaaacg gcttgattaa
      541 agatattacg ggattgtttg ctactttttg tttaatcatt ttccaactcg tagattacat
      601 tagataatgc acttataaca gctgtttcag ctcgcaatat catcttgccc aaactcacct
      661 tataaacatt ttcatgcctg ttgagcaatt ctatctctcg agcactgaaa ccgccttccg
      721 gtccaattat aacagcaatt tttgtatcgc tctttatttt tatatttctt aagcattcct
      781 ttaaagtcat ggtatgagta cgttcaacac atgctatttt tatgtcaaaa tcctgattgt
      841 ttaaaacctg ctcaattgtt gttctttgct caaccatagg gaaatcgact ctttcacact
      901 gttttactgc ctcgtttgca attttttgcc acttgtcaat ctttgaatca gcaacagaag
      961 gctttataac ggaattatct gtaataaccg gtattatttt ttttatgcca agttcagtag
     1021 ctttttgcat gacaaaattt tgtgcatctg ttttgagcac actttgcact aggtacaggc
     1081 tcaagtcaag gcagtgattg gcttttaggg tttctacaac tttagttgta atagattttg
     1141 aatctatatt ttgtataaca actttgtatt gagttctgtt ttcatcaacg agcaacaggg
     1201 tttcgccgac ttttgagcgc aaaactctgg caatatgatg aaaattctcc ttgtcggaaa
     1261 cagttattat atcttgattt atgtcacctg ttgaaataaa aaagtgcggc atttaaggat
     1321 ttccccgttt tttctacacc gtttggatga tttgtcatac ctaagtataa taccagtaaa
     1381 atctttttat aacaagcatt tcaggcactt tttcacaaaa ttttcgtcaa aaagtatact
     1441 aaagtatgat aacttcttgt tcgatatatg gagtgttcac agagttagta aaaaaagaga
     1501 gaaagagaga gaaacatgag tttattcgta aacaccaaca ttaactcttt gattgcacag
     1561 agaagcttga acagcgcgaa cagcagttta caaagcgcaa tcacaaggtt atcaacaggt
     1621 tacagagtta accaagcagg cgatgacgca gcaggtcttt gcgtggccca gggtttggac
     1681 acacaaatca gaggtaacaa aagagcgatg ctcaacgttg aagacggttt gaacatgatg
     1741 tatatcgcag aaggcggtat gtcaggggta acagaagact tacagagaat ccgtgagttg
     1801 tgtatccagg cagccaacgg tatctattca ccagaccaac aacaaacgtt gatgaacgaa
     1861 atcaaacaga gacttgaaga cattgacgta attgcaaact caactgtatt taacggattg
     1921 caactggcta acggctcaat gcaagcagct ggtaaatcaa tcgtattgca atcaggttca
     1981 ggttctgacg ctgcaaacaa cacaatcgat atttcaagcg cattgacaaa catgctttgt
     2041 acatcacttg gtatttcgtt agatattgtt agcatgactg atgctgtaac aagcttaggt
     2101 gatgactacc tcgatgcagg cgtatatgac ccggctaacc ctcctaaagt taacggtaac
     2161 aactgggaca acgcagctat ccgtgcttac attgacaaac ttgacacagc aattgacaaa
     2221 atttctcaag acagatctat gttaggtgct tatcagaaca gattgcagtc tacatcagag
     2281 aacttaacag taatgaacga aaactatgaa cgttcaaaat cacaaattat ggacgctgat
     2341 atggcggaag aaagtgcaaa catggttaaa tatcaggtat tgcaacaaac ttcagcagct
     2401 atgcttgctc aagccaacca gattccttct attactcttc agttattagg acaataataa
     2461 cccatatatc cccaacacca atatacaggt ttacgtataa aaagactcaa tgtctctcta
     2521 gcgtcgattg tttatgcaat cggcgcctct cttgtttaaa caaaaaatta agaaaagctc
     2581 tcatcaaaaa taacaacgcg gtttctgccg cgttttttgg cttcatacaa ggctatatct
     2641 gcactctggt ggagcttttc aggtgtttca aaagacatgt caaactcact aacacctaca
     2701 ctgattgtaa cgttaagaaa atctgtgcca agcacctggt catcagaaat gttgatatca
     2761 gccgtttcaa cagcttttct taatctttga gcaacaaaag cagcttcttt gatttttgta
     2821 tcaggaagca aaatacaaaa ttcttctcct ccgtaacgtg aggcaatatc gtattcacgc
     2881 agctcatgtg caactatttt tgctacattt ttcaacacac aatcccctgc actgtgcccc
     2941 caggtatcat ttacatgttt gaaatagtca atatcaagca taatacagca aagaggtttc
     3001 ttgtttcttc gagcatttgc aacttcttgt ttaagacgca cttcaaactg acgtctgtta
     3061 ttgagtcctg tcaaagcatc caaagtggca aatttaagaa cctgcgcata agcatttgcc
     3121 ctttgcgttg tgacagaggc ctgtgcactg agctggcaaa ggtaatcgat atctgttttt
     3181 gacaatttat caatattact gctggctgct ataacgccaa tggttttgtc ctcgtttctt
     3241 atggcaaaaa gtccggtttt tccgtctttt gatataacgt tagctttttt atccgtcaat
     3301 tttggcaaaa gagacaaaac tttttcgtcc tgacagtcca atggccaaaa tagtttatat
     3361 ttgttgtttg catcttttat aaaaatataa atcaaatgct ctgaaacaaa tctgtctatc
     3421 aattcaccta taatcggcaa aatataatca agctcaaact gtgtttctat gagttttgca
     3481 atacttttca tcacattttg aaattttata tgcacacaaa gatgtttgtt cagtatttta
     3541 ttaacaatca cggtggcaat ttgcgaaact gctatacgca gtgatgttaa aaattgagtt
     3601 ttttcaatat tttgcgagaa tgtatcaaaa tttatttcta taacgcctat tagttttttt
     3661 tcattaaaaa caggaaaata aagcaggttt ttatcctgtt ttagagtatc acaaaacgtg
     3721 gttgataatt ttttatcata ttttaaaagc ttgttattaa gaataaaccc tttgttgtat
     3781 gaggatttta gcttattaaa aatattttca accagctctt gctgctggtt tttttctata
     3841 ataatccaat ccttaacaaa gtccctaagg gtagaagtag attcatcttt gataaaaatt
     3901 tgaaagttat taacacttaa atacttttca aaaattgttt ttaatccatc caaaagcaaa
     3961 gcagcatcat taacccctgc aagaatatca gagatttccc atagaaaatt caactcatca
     4021 aaattagaaa cttctgtcat atctgccatt gtagagagta tcctcttcat attcttcaaa
     4081 aatctttttt gcagtacatt ttttgaaact ttttttcata aacttatccg cctcttcaga
     4141 atctgcaacg acttttccgt taacataagt tatatggtta acaccgagcg ggtcgtcttc
     4201 attctctact tcttctgata cgatatgcgg cgttttcatt ccttctttga tttgagactc
     4261 aggagcaatg cctctttgtg ttgttttaaa ttcattttgt attgtagact tttctacaac
     4321 ttctgaataa atatcaaaaa tgtattttgc aatatacgga ttttgttgtg tgttgacaat
     4381 aagcattgcc ttttccaatt cttcttgaga ttcacgcagt ttgcctaatt ttcttagcaa
     4441 aatagcgagg ttgtagtgcg catcaaaggc cattggctct tcttctattg ctttacaata
     4501 gctgagtcct gcttctttat aattgccaaa tatatgattt gccagggcat aattgtagtt
     4561 gatattataa ctgttttttt tgcgttttaa tgctttttta taagcatcaa ttgctttttc
     4621 aagataatca tttgaggcat gagttttttc acccagcagc attgattttc ctctatatgc
     4681 aaggcccata ttataccaag ctattgtttt gttttctctg gtacttttta cactgtcaaa
     4741 aatcaaagga atatgaactg tcacacgatt tgtatctata attgtctggt attctctgat
     4801 agctttatca aaatcagaca gtttttctgc agagacaata ccaagattca tgcggcatac
     4861 aataaattta gggtcgtatt taagagcctc ttcatattgt tcaactgctg aatagtagtc
     4921 ttcgtattta acatagatgt ttccaaggtt gcaacgggca agagaatgtt ctggatattt
     4981 ttccagaccc tgtttataaa attttattgc tttttcgagc ttgtgtgaac ggtaagcttt
     5041 atcaccctcg tttacgtaat acaagcccca cagtttattc acctgtttta cgtaccagcc
     5101 ccaaaacaca aatattgaaa gcaaaaatac aagtataaaa atacccgcaa ttacttttgg
     5161 cactgttttt ttaaaaagct tttttaaaaa tctcatataa cttattttat acttgtatag
     5221 gcacaatagg caagttgttt tatttttcaa actttattag tgcattataa tgttcatcgg
     5281 aaaaaactct ggcatttttt tgaagccctg cgtaagcact caggttttta aaaacatacg
     5341 gtttatctgc actgtgggta aaaagtatgt aataacatct attgcaaggc aacaaatcat
     5401 atacttcttt aatttgccgt tgctcataca acggagtttt tagaacataa atattttgcg
     5461 aaggatcgct tacagaattt ttataatatt caaaattgat tgatgatgaa tatggaacaa
     5521 taagagtgca tttattattt gattcttttt caaacaattg caaaagattt tttgtgtctt
     5581 ctctgtagta gtgtttttgt aatatcagcc tgtaatccgt tgcaatgctg ctcataaaaa
     5641 acatcatacc aaggactatt gaagcaaata tataaaccgg ttttcttttg caccatagat
     5701 tttgaaacgc aagtgacaaa acaaggacaa aaacaggaaa caaataaatt gcagtcctta
     5761 aatacagtgg atagatttta aaataagaca atgcaaacgc tgtcaaaaaa ggaatggcta
     5821 atacaagatt tctttttacc ttaatgtttt taaacagcac atataaacct gcaacaaaca
     5881 ttatcacaat aataattttt gccttaaaat cttcaaaata ataagccagg tttgctgcac
     5941 acaatgataa aatgttagaa aaatttttgg caataaaacc ctgtgtccaa aaatcattca
     6001 aaaaaccgtc tgtatgaagc cgaaatgtat atatagcaaa caacactaat gaaaaaccag
     6061 gcagtacaaa caacgcaaaa agctgttttt tagagagttt ttgcaatatc aaaaacaccg
     6121 caaaaagagc aaatgatgct gtataagaga accaaaccga caaagcaaac accatgcctg
     6181 ttgcaacaag caatttaaaa ttatctttaa ttttatcaac ataaaacaca aacaacaaaa
     6241 tgacacaaaa gcaaaaaaca tcacacgcat aatgctttag ctcctgtgaa aaataaatca
     6301 gttgatagtt taagacaaat aacatatttg caaacaacac agcagctttg ctttttaggg
     6361 ttttgagaga aagcagacaa aatacaatca ctgaaagcaa accaaaaata agcgaaggaa
     6421 gtctgaaagc gatttcatgt tgttttgaaa atacagcaca aaacttacac acgcaagcat
     6481 acaatggagg tgtaacctga ctgaaatcca aaggcgcaaa aagttgaata aaattacggt
     6541 ttaaaagatt caacgcaagc gcacattcat cattccaaaa gggtcttgca tatgagaaaa
     6601 acaaaactct aaacaacaca cctgctgcaa caagaagtcc taatgtgata taaaaaataa
     6661 ctttgttttt tgttctgtcc atcaagtatt tatcatagca cagagtatga tattattatt
     6721 ttatgaaaag aaaaaaggaa gtatttaatg attagtaatg tttgtgtttt tgcatcatct
     6781 tgtaattttc ttgatgaatc ttattataca gaagcagcgg aactaggccg tatgctggct
     6841 gagtcgggta tggatatgat ttatggaggc agctgtctcg ggttaatgtg ggcttgcgca
     6901 aaannaaaag aagtaaaaga caatggaaga agattaatcg gagttatgcc ggaaaaactc
     6961 aaagagatgg atgttttttc agattattgc gatgaatttt ttcttactcc ttgcatgagg
     7021 agcagaaaag ccaaaatgga cgaactctca gaagccctta ttgctctgcc cggaggtttt
     7081 ggaacactgg aagagctcag tgaaatgatt gtgcaaaaac agcttggtta taacaacaaa
     7141 gctatagtaa tcttaaacac taacggcttt tacaacaatt tgcttaactt ctttgacgat
     7201 attattgaac aaaaatttgc aaataaaaaa gcacaaaatt tatactttat agcaaanngc
     7261 caaaagaagc cgtagagtat ctcaaaacct atgagccaca agatttggca gtaaaaaaag
     7321 aagacattta tgcaaggtaa atattaaaaa agaatacggt tattattatt ttgttttgaa
     7381 tttccaccga gaagtttatc taatatagaa tcattttttg ttgatttgcg gtatgtatcg
     7441 gcaaatatac cggttccgat gtctctttta tcttcgcctt ttttaaggct ttgtaggcgc
     7501 aattgtgcag cttttactgc tttatccaga tttctaaaat cgattgcgct catatcataa
     7561 ttgttgtaca gagcaaaata tttgattgat tctgcctctc tgatcatgtt ttctatagca
     7621 gctctgtttt ttgtagcaat attagcaata tctatattag caagtctctg ctgcagaaca
     7681 tccgtgtttt catttttcag ttgttctttg tgagccattt cttgctgggc catgcggatt
     7741 ctgtattctt caggtgtttc tgtaactttt ctgatattgc gtgcactatc aaatgccgca
     7801 tctctttgtt tttttaaatc agaagaatac ggtgatgtaa tataagcatc tatgttcatg
     7861 tcgtctggca ttttaagacc tcactattaa cacaattatt ataaacccaa aaatgatttt
     7921 tttttgctat ttattgtgcg gatatttaaa attttgttgt acaccaccag gttcttaaaa
     7981 tttcttgtac atcttcgcct gttttattga gctcagtttg tacagagccg tctttgtatt
     8041 ttgtatcaca agatgcactt gcagtgccgt cagcgtattt tgcaacacgg catatagaat
     8101 accccttctg gcatttatat ataacgcttg tgtctttttc aaaagtacat ttgcctgctt
     8161 ttattcttct aatgatttca ttcgtaccca ggccgcaatc gccatatatt tttgtaccgg
     8221 tcttgagtct tactacctca caagtatttt cgatctttct tgttctcatt ttattttcat
     8281 aatctttaaa cgtttcagtg gttgtattgt cacatttgta agagccgtaa gcacccggat
     8341 tgaccgcatc aaagatttgg tcaacagttg tgtagtaata gttgtccata cctactgcat
     8401 acgcataacc tgcaacggca agaagaatta ccaatagagc aaaaaacttt ttcatacaat
     8461 aactccacaa actaatgatt accaactatt taattatatc aaattttttt acttttaaaa
     8521 ttatacattc aatgtatata gcaaaaaatt ttatttattt gtt
//
LOCUS       DABS01000190           13458 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12133, whole genome shotgun sequence.
ACCESSION   DABS01000190 DABS01000000
VERSION     DABS01000190.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 13458)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 13458)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13458
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(156..926)
                     /locus_tag="CPT85_08685"
     CDS             complement(156..926)
                     /locus_tag="CPT85_08685"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20952.1"
                     /translation="MQNYQVGYQPNIQTKTQTQAVPAAQNNTATGATFNIGTGTPGSI
                     PANGANGVVINIMGASVNPNGANINNTYNTTQTGQAPAPTQAYDKSYYTMPAMQTTPT
                     VPVAASSLNDKKTEDKPKKDIVLLTDDYIKTLENYLRNDNPDIKLMGAKEVMKRFRED
                     ESRKGDPALTALLNLMLQSKYSSVKMIGMGILENGWAQGDSLTQQLLGQIQHSKSGYG
                     LDALDAAQAALKTAGQTIKVVDNNPPKPKETKTDKKDK"
     gene            1131..3479
                     /locus_tag="CPT85_08690"
     CDS             1131..3479
                     /locus_tag="CPT85_08690"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20953.1"
                     /translation="MVDGVNFNPFTMKAWSTEEIQQLDTDGDDKISEAEVKAQWSWLS
                     GNSQDAEGDVAIDDNAADGLFANAQKAGVTQSAETEDEFKSNMSIVADEFVEQYMTQH
                     PEITDNERAAIQKLISTTSTSFITDYLAQSPEGPWDMQKVVSDFQTKMDEAIANNNAV
                     MNTVNSTVSGYKNNVDTNFDSMTNLTRNAVANNNISNSEWNSIRNKSVQYLMGMMMGD
                     SVNADFLKNIDPNYTKNENYKAAMQAINELKDTADPIQMQQYMTTAQNSLNKMLNEIG
                     RDKVADSIETYAQAKEEAAVTEKVKGYADNWAESQITADMSDSEKAKLNTFATNCITK
                     FAAKMAEEGRFATSMSDNEIQAEFSNFITQQKARLDQSQQALTRSASGLESDYQNMVS
                     ISDAAAANGNISAEEKSNLISSATNLIINQLLNDMENIPVMEGLNADYKNSTDFKTLQ
                     TLITNLKASADPDEIAQLKTQAQELVTKMLDAYTGDQLVKAVDSTKPIEVTGATRDNV
                     IYNSALFSEYQANVSRSTSRGKQDDGRLDEIQNMAKADLNTLAESLKAQLKSELGTAY
                     DEAEIQKYINDAINDTLATFTQNVSRRNGHGNYNTGADEQAFVFLRRSGTSKGRYVYN
                     LQALTNTFLDNFNAASKTKNAAKNDPSQATYDKENVIADSLGNEYNRNVKVKNNDQTA
                     LYNTAKAKLQQVAAALKASLIAEGCNVSSTEIDSIVNDSMQETMTTFNFNTTKPEGLR
                     FLSKDYFNYISNRNSFSTQELVDTFMNKVDVKLEEAKEKAKQ"
     gene            3546..4142
                     /locus_tag="CPT85_08695"
     CDS             3546..4142
                     /locus_tag="CPT85_08695"
                     /inference="COORDINATES: protein motif:HMM:PF03692.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="DAB20954.1"
                     /translation="MDIEISKEPVEYLSDFPQHLCNMCGKCCKAITTPYSWEELVELA
                     KQGQEEAKVFVEVFVRYDSVDEARAAVPDHVENILNQLRKNNPDFDESKVTFFHCPHL
                     TEDNKCAIHATRPDCCRRAPRNGWSLFPPGCGFKGWQFMQKEKVKASVRALKEYLLEL
                     ELLPEDKVLPEKGKTVKEMKDFIKEKIKPWEKYGALYW"
     gene            complement(4105..5976)
                     /locus_tag="CPT85_08700"
     CDS             complement(4105..5976)
                     /locus_tag="CPT85_08700"
                     /inference="COORDINATES: protein motif:HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20955.1"
                     /translation="MSEGLTSKFLKQAFQFQEEKHYKQAIEALYKALCIESDNIEILS
                     QISHLYYLMNNFERSLEYAEKILDINPDHIETLKIVVNINKINKKYARALNFAQKLYK
                     LSPQLEHFTTYLEMLTECSQFNTVINEIEESKFNFEERKNEKLLLIEGYARLKLNQIF
                     KAIGVFQEIIKLYPQNTDARFYLGVIYYQKHQEADAEKLFNSILDEIQCDRTYNYLGL
                     LKLDQHKLADAINYFQFAIKIEQNNAFYHYNLGTAYSLNGWLVEAENSFKNAVSLEPD
                     NVVYNYALAYLYYERHDLKKALESIEHILKIDANYTDAIILKALIDAKNGNIISAKNS
                     LQQLTEKVTNNDFLYYAMAKIYKEFPMYKEAVDCLQQALFIKPESLEYLSELADCYCE
                     LEKYDVAQDIVTKVLYLNKHFIYAHLLQAKLYLRQGKYQEATKIVDNAIKLDSSCAEA
                     YKYKATILAAQGLKNRSIDNAKIAVSLQPANHKYYAFLAKLYFDAQEYDNAFLYYKEA
                     SMLDELNVDYLYNAALSADKDDDFVNASNYYSYALRQEPFNNLIIYEYVDLLKRHNRL
                     KQALNLLKSKIDTVDSENVEKVLKQKYKELKAEDEQPFFKKVGKYFTSTMHRIFPRA"
     gene            complement(6038..6430)
                     /locus_tag="CPT85_08705"
     CDS             complement(6038..6430)
                     /locus_tag="CPT85_08705"
                     /inference="COORDINATES: protein motif:HMM:PF02472.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="DAB20956.1"
                     /translation="MSSRDRNTFNEINITPLTDIFLVLLIIMMVIAPLLDQQGLNLAV
                     PNNVEVQDVKQDNKLISVTVSDDDRYFIDESEVAVTQLENVIKQKSKTLPEGVLILAQ
                     PEASHGAVVKLMDKARDAGVTNISISES"
     gene            complement(6443..6967)
                     /locus_tag="CPT85_08710"
     CDS             complement(6443..6967)
                     /locus_tag="CPT85_08710"
                     /inference="COORDINATES: protein motif:HMM:PF02472.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="DAB20957.1"
                     /translation="MAFKTSKGKEALFTEINITPLTDIFLVLLIIMMVIAPTFQSNDS
                     SIKMPEINSGLSVEQKNATISVTKDGKFFVNGSQIQESDLYNQLVALKPSLEKKEVVV
                     KADESVKSREIMKIMKAAQDAEFEKLVVAGEPLSKKEQKKLETTQKQTQTTTVPVKTE
                     DEYRSTVGEIPSEE"
     gene            complement(7000..7647)
                     /locus_tag="CPT85_08715"
     CDS             complement(7000..7647)
                     /locus_tag="CPT85_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_924087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="DAB20958.1"
                     /translation="MDLLLKAMIEDLWIVAPIIFCSFLTVAVAVNRFYYYNKNKRDVV
                     LFIPKLQKELARNNLDSAQNLSVQLGGIIGEVSEEAVRIFSEQKNGFSRSFDIASSLA
                     TRKLESHLTILGTIGGVCPFLGLFGTVVRILYTFQDLAVQGNQSAAVASGIASALIAT
                     ALGLGVAIVAVVLYNYFQSMVKRFEDDFQLIKLLFLSFVDSNEEVVINQPTNIAL"
     gene            complement(7694..8890)
                     /locus_tag="CPT85_08720"
     CDS             complement(7694..8890)
                     /locus_tag="CPT85_08720"
                     /inference="COORDINATES: protein motif:HMM:PF13103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20959.1"
                     /translation="MTLLGNINIYEEDEEEIKDTKYTYGIYKKEDKNDISLSKCFAFS
                     AILHPVVAGLIWLGIFILTLLGITFSVFEKPQQKPKDIEFVLVNKEGTPINKNTKYRS
                     DRNSRAGGIHDPKRPVSQPQAASQPSKPQQAAPVQKAPQKQQRAQQPAQKQAQQPKKA
                     APKKQQQSFQMPWAPQKTTKPPTPQGVPKAPAAAPRPAVKPSAPKVNKPSGSFNIPVP
                     KVSAPKVAGPSGGPIAGSNTGSGSRSGSAGTGSKSAPSPSFSPSGGSSSGGRFSPGSA
                     GRGGNVGNPGPGNPKGAPGIDALKEPDFGPYMRELQRRIKMNWEPPKGNESKRVVLLF
                     KIARDGRLISLRVYKSSGLPAADRAAMHAVELTAPFKPLPPEYKGDSVDIQFTFDYNV
                     FGATAY"
     gene            complement(8964..9680)
                     /locus_tag="CPT85_08725"
     CDS             complement(8964..9680)
                     /locus_tag="CPT85_08725"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20960.1"
                     /translation="MMNVKTKKMVSSLLLASLLTIGAGFAQTDNTAANAQYTQQFQPL
                     QGKVIYVPSGTTFPATATMELSSESLNLGQSVCIALSKNFYYNNTLVAPIGSSVNGTV
                     IQVKKAGRAGINGQLMVKFTNIVTPYGQMIPISGKIQTDDGTGLIKGGTKMDSATDYA
                     KDIAVGTAAGAVAGVIFGPLSGGKVGKGAAYGTAVGATAGLAKSLWDRGTPAVVPAGT
                     EVNIVIDQQITFTPQQSYQY"
     gene            complement(9792..11483)
                     /locus_tag="CPT85_08730"
     CDS             complement(9792..11483)
                     /locus_tag="CPT85_08730"
                     /inference="COORDINATES: protein
                     motif:HMM:PF01103.21,HMM:PF08479.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20961.1"
                     /translation="MQFVKIQAGDPYSVDIVQQNLKAIYDMGYFSEKMKAIPVKIDDK
                     NIKLKIIVQENIPITDFNITGNNSVATGDLLQILNPLMNKPQNILKLNEAITEIQEYY
                     ASQGYILARVTSITDDPDGMVNLTIDEGKIGAIIIEGNKKTKEFVVKRNILTQPGTIY
                     NENLIKQDLMRLYGTQAFKDVKRTIERNEENPDVYDVTIHLEEQRTGTISIGGGLDTA
                     TGLFGTGGFTDNNFRGLGQRVSLSLLAGTGVVMADSSMLNRANLQAELSWFEPKFRGT
                     DNSLMVKAFGRDFASYQIPLAVEQRFGIESTISRAFTNYPHLTGSFGVGIENVHVKEG
                     DGNQIASLYAAHNIPISERAKQLQGGLFLSLSPSLIYDTRDSTTLPRKGVFANVRFDE
                     QIALDGFENTFGKLSGSIKRYYPVAKKSSVSLAFRAGGKIHGDMPEVMAYRLGGPYTV
                     RGFRMSGIGTGSGFMMGSAEFQTPIPFIDRITDAKFLDNIRIAAFVDAGQIYGSTVTN
                     EIYNRPIHAITAGVGVRVFVPGVGPLSIDWGYPLTGVPAGTSKGAFTFGVGDFFY"
     gene            complement(11535..11720)
                     /locus_tag="CPT85_08735"
     CDS             complement(11535..11720)
                     /locus_tag="CPT85_08735"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20962.1"
                     /translation="MGQSCPSLAATPKWKFWQKNKQMEQPVPEENEENRQDSLWENLQ
                     PDTKNLQAEKTQSSSDI"
     gene            complement(11875..13407)
                     /locus_tag="CPT85_08740"
     CDS             complement(11875..13407)
                     /locus_tag="CPT85_08740"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20963.1"
                     /translation="MYNKDGSKGDLIQIDVGTSGINGAVDSVATIVNTINSKNAGITA
                     SIVNGKLVLTRDQDQAAGSFEIIKGSSDFTNKIGLTSGGNYIGDTTQGDAATQTVLTS
                     DGLGDLLVRDSMTLGSIGVKNGTFRINGVDILVKASDTIYDLAARINSVFSDPKYADS
                     RIIASYENGELTLRTKQASSTARIEVEAGSTNFTEIAKLTENYRNSVDLGKTELGQNA
                     HFNINGKDYDMALDLNDITDDGIYNGNNLIYLDKDGNVVTDPNDAAITIELKKTGQTT
                     IDIGNNLLNDSVSKLQNFVNKFNSAMNASENPILSDDSEFAAFINKIKSALTSNVGAY
                     NKITQQLADIGIIVKVTGGTNSNMGSVHMSLSKTDGKYDYVEAFYQNPQKVFDIILGD
                     YSQPLDNTVAGVFTRLSDVLHTNLKSNRNGYFKVTPRLLESQQKAIKKEITSTTFDLN
                     ELKNIAMGTDSTEGLSEYLKQLEQQYQLINEAILALNKQYSNSLTKLILNQNNSSFNP
                     IV"
BASE COUNT         3839 a         2468 c         2574 g         4577 t
ORIGIN      
        1 catataaatg cctgtcagcc tgtttgcggc agcttctttt acatgttctg ccgaggtttt
       61 cttgcctact tcgtgtgcat tatacaagac tgcgcctgct acaacaccac ctgctatttt
      121 tgctgctaca ttccatttat tcatagttag acctgttact tatctttttt gtcggttttt
      181 gtttcttttg gttttggagg attgttatca acaaccttga ttgtttgccc tgctgttttt
      241 aatgctgcct gtgctgcatc aagtgcatct aatccatagc cggatttaga gtgttgtatt
      301 tggccaagaa gctgttgtgt caggctgtct ccttgagccc atccgttttc cagtattccc
      361 atacctatca ttttaactga tgagtattta ctttgaagca ttaaattcaa taaagctgtc
      421 aaggcagggt caccttttct tgattcatct tctctgaatc ttttcattac ttctttggca
      481 cccataagtt ttatgtctgg gttgtcattt cttaaataat tttcaagcgt ttttatataa
      541 tcgtctgtta ataatacaat atcctttttg ggtttgtctt ctgttttttt atcgtttaag
      601 ctagaagctg ctaccggtac agtgggtgtt gtctgcattg ccggcattgt gtagtagctt
      661 ttgtcataag cctgagtggg tgcaggtgcc tggcctgttt gcgttgtatt gtatgtatta
      721 ttaatgtttg ctccgttagg gtttacagaa gcacccataa tattgataac cactccgtta
      781 gcaccgtttg ccggtatcga gccgggtgtt cctgtgccga tattgaatgt tgcacctgtt
      841 gcagtattat tttgagccgc aggtacagct tgtgtttgcg ttttggtttg tatattaggt
      901 tgataaccta cctgataatt ctgcatactt tcaccttaca ctttacttat atataaacgt
      961 aatttctctt tcatatgtgc taattttttg atcctttgta acaaaaaatt aacatttatc
     1021 ttattatcct aaagtttatt aaaacaaatg tcgaaaagaa gattacaggg aaactataag
     1081 gagtaatctc taagaaagtt atatcaatta cttataaaag gagtattaaa atggttgacg
     1141 gtgtaaattt taatccattc acaatgaagg cttggtctac agaagaaatt caacaactgg
     1201 atacggatgg tgacgacaaa atttctgaag cagaggtgaa ggcacaatgg tcttggttgt
     1261 ctggcaacag tcaggatgca gaaggtgacg ttgctataga tgacaatgca gcagatggct
     1321 tgtttgccaa tgcacaaaaa gcaggtgtca cacaaagtgc tgaaacagaa gatgagttca
     1381 agtcgaatat gtctattgtt gctgatgaat ttgtggaaca gtatatgact cagcacccag
     1441 aaattactga taatgagcgt gcagcaatac aaaagcttat ttccacaaca tcaacttctt
     1501 ttataacaga ttatcttgct caaagcccgg aaggaccttg ggatatgcaa aaagttgtaa
     1561 gcgacttcca gacaaaaatg gacgaagcaa ttgcaaataa taatgctgtt atgaacactg
     1621 tgaactctac cgtttcaggt tataaaaaca atgttgacac aaattttgac agtatgacaa
     1681 atcttactcg taatgctgtt gcaaacaaca atatttcaaa ttcagaatgg aattctatca
     1741 ggaataaatc cgttcagtat ttgatgggta tgatgatggg tgatagtgtc aatgctgact
     1801 ttttgaaaaa tattgaccca aattacacca aaaacgaaaa ctacaaagca gccatgcaag
     1861 caataaacga gttgaaagat actgcagatc ccatacagat gcagcagtac atgacaactg
     1921 ctcaaaatag cctgaataaa atgttaaatg aaatagggcg tgacaaagtt gcagattcaa
     1981 tagaaacata tgcacaggca aaagaagaag ctgctgtaac agaaaaagta aagggctatg
     2041 ctgataactg ggctgaatct caaattactg ctgatatgag tgatagcgaa aaagctaaac
     2101 ttaatacttt tgctacaaat tgtataacca aatttgctgc aaaaatggca gaagaaggca
     2161 gatttgcaac aagtatgtct gataatgaaa ttcaagctga attttcaaac tttataactc
     2221 aacaaaaagc ccgtcttgat caatctcaac aagcattgac aagaagcgca tcaggtttgg
     2281 aatctgatta tcaaaatatg gtttctatct ctgacgctgc tgcagctaac ggaaatattt
     2341 ccgcagaaga aaaatcaaat ttgatatcat cagctactaa tttgattatc aaccagctgc
     2401 ttaatgatat ggaaaatata ccagtaatgg aaggcttgaa tgctgattat aaaaactcaa
     2461 cagattttaa aacacttcaa actttgatta ctaatctaaa agcttctgct gatcctgatg
     2521 aaattgcaca gctaaaaact caagcacagg aacttgtaac aaagatgctt gatgcttata
     2581 caggtgatca attggtaaaa gcagttgatt ctacaaaacc aatagaagta acaggtgcaa
     2641 caagggataa tgttatttac aacagcgcat tattctctga atatcaggct aatgtaagcc
     2701 gttctaccag cagaggcaag caagatgacg gcagattaga cgaaattcaa aatatggcca
     2761 aagccgactt aaatactctt gcagagtctt taaaggcaca acttaagtca gaacttggta
     2821 ctgcttatga tgaggctgaa atacaaaaat atattaatga tgcaataaat gatacactag
     2881 caacatttac tcaaaacgta agcagaagaa acggccacgg aaactacaat acaggtgctg
     2941 atgaacaggc ttttgtcttc ttgagaagaa gcggtacaag caaaggccgt tatgtctaca
     3001 acctccaagc attaacaaat accttccttg ataactttaa tgctgcttca aaaacaaaaa
     3061 atgctgctaa aaatgacccg tctcaagcta catatgataa agaaaatgta attgcagaca
     3121 gtctcggtaa tgaatacaat cgtaatgtaa aagttaaaaa taatgaccag acagcattgt
     3181 ataatactgc aaaggcaaaa ttacagcagg tagctgccgc attaaaagct tcgttaatcg
     3241 cagaaggctg caatgtcagc tcaactgaaa ttgattcaat tgtaaatgac tcaatgcaag
     3301 aaaccatgac aaccttcaac tttaatacaa ctaagcctga aggcctcagg ttcctttcaa
     3361 aagactattt caattacata tctaacagaa attctttctc tacacaggaa cttgttgata
     3421 catttatgaa caaagtagat gtaaaactgg aagaagcaaa agaaaaagca aaacaatagc
     3481 gcatcaataa cataataaaa aagcaaggat ttaacttcct tgctttttta ttttataatc
     3541 ctgttatgga catagaaatt tctaaagaac cggttgagta tttaagtgat ttcccgcagc
     3601 atttgtgcaa catgtgtggc aagtgctgta aggctattac aacaccttat tcatgggaag
     3661 aattggtaga gcttgcaaaa cagggtcagg aagaggcaaa agtttttgtt gaagtatttg
     3721 taagatacga ttctgttgac gaagcaagag ctgctgtgcc tgatcatgtt gaaaatatat
     3781 taaaccagtt aagaaaaaat aacccggatt ttgatgaatc taaagtgact tttttccatt
     3841 gtcctcacct tacagaagat aacaaatgcg caatccatgc tacacgcccg gattgttgca
     3901 gaagagcccc caggaatggt tggtctttat ttcctccggg atgcggcttt aaagggtggc
     3961 aatttatgca aaaagaaaaa gtcaaagctt ctgtcagagc actgaaagaa tatcttctag
     4021 agctcgagct gctaccggaa gataaagttt tgcctgaaaa aggtaaaaca gttaaagaga
     4081 tgaaagattt tattaaagaa aaaattaagc cctgggaaaa atacggtgca ttgtactggt
     4141 aaagtatttt cctacctttt taaagaatgg ttgttcatct tctgctttta gctctttata
     4201 tttttgcttt aaaacttttt ctacattttc cgaatctact gtatcaattt ttgatttaag
     4261 aagattgaga gcctgtttta gtctgttgtg tcgttttaaa aggtcaacat actcgtaaat
     4321 aataagatta ttaaagggtt cctgtctcaa agcatacgaa taataattag atgcattgac
     4381 aaaatcatca tctttgtctg ctgatagagc tgcattataa agataatcaa cattcaattc
     4441 atcaagcatt gatgcttctt tgtaatacaa aaatgcatta tcatattctt gagcgtcaaa
     4501 atacagcttt gcaagaaatg cataatattt atgatttgcc ggttgcaagg ataccgcaat
     4561 ttttgcatta tctattgaac ggttttttaa accttgagca gccaatattg ttgctttata
     4621 tttgtatgct tctgcacagc tgctgtccaa tttaattgca ttatcaacaa tctttgttgc
     4681 ttcctgatat tttccctgtc tcaaatacag ttttgcctga agcaaatgag catatataaa
     4741 atgtttgttt aggtataaaa ccttagtgac aatgtcttgg gcaacatcat atttttcaag
     4801 ttcacaatag caatcagcaa gttcgctcaa gtattcaagt gattcgggtt ttataaaaag
     4861 agcttgctgc aggcaatcta cagcttcttt atacattgga aattctttat aaattttggc
     4921 cattgcataa tacaaaaagt cgttatttgt aactttttct gtcagttgtt gaagagagtt
     4981 tttggcagat atgatatttc cgttttttgc atcaatcaga gcttttagta ttattgcatc
     5041 agtataattc gcatcaattt ttaaaatatg ttcaatgctt tccaatgctt tttttaaatc
     5101 gtgtctttca taatacaagt atgcaagtgc ataattatat acaacattgt ccggctcaag
     5161 agagactgca tttttaaatg aattttcggc ctctacaagc caaccgttaa gcgaatatgc
     5221 tgtacctagg ttgtaatgat aaaatgcatt gttttgttca atctttatag caaattgaaa
     5281 atagttgatt gcatctgcta gtttgtgctg atccagtttc aacagaccta agtagttata
     5341 tgtcctatca cattgtattt catctaatat gctgttaaaa agcttttcag catcagcttc
     5401 ttgatgtttt tgatagtata taaccccaag ataaaacctt gcgtcagtat tttgcggata
     5461 tagtttaata atttcctgaa aaacacctat tgctttgaaa atttgattta gttttaatct
     5521 tgcgtaccct tcaattaaaa gaagtttttc attttttctt tcttcaaagt tgaattttga
     5581 ttcttcaatc tcatttataa ccgtgttaaa ttggctgcat tcagtcaaca tttcaagata
     5641 tgttgtaaaa tgttccaact gcggtgatag tttatataat ttttgagcaa agttaagagc
     5701 tctagcgtat tttttgttaa ttttattgat attaacaact atctttaatg tttcaatatg
     5761 gtcagggttt atatcaagga ttttttccgc atattccaac gaacgctcaa aattgttcat
     5821 caaataatat aaatgcgaaa tttgagacaa tatttctata ttgtcacttt ctatgcacaa
     5881 agctttgtat agagcctcta ttgcctgctt atagtgcttt tcttcctgaa attgaaaagc
     5941 ctgttttaaa aattttgatg ttaacccttc gctcataaat ccattatatt gttaattccg
     6001 acactcgtaa agtcttttat ctaaatatac tttaattcta cgattctgat atagaaatat
     6061 ttgtaactcc agcatctctt gctttgtcca taagtttgac aacagctccg tgagatgctt
     6121 caggttgagc cagtattaaa accccttcag ggagtgtttt tgatttttgt tttataacat
     6181 tttcaagctg tgtaaccgct acttcactct catctataaa atatctgtca tcatcactta
     6241 cagtaacaga aataagtttg ttatcctgtt ttacatcttg tacttcaaca ttgtttggca
     6301 cggcaaggtt taacccctgc tggtcaagta atggtgcaat aaccatcata ataatcaaaa
     6361 gtaccaaaaa aatgtctgtt aatggtgtta tattgatttc gttgaatgta tttctgtctc
     6421 tgcttgacat agctttgttt ccttattctt cagatggtat ttcgccaact gtagatctgt
     6481 attcatcttc tgtttttaca ggcactgttg ttgtttgagt ttgtttttgc gttgtttcaa
     6541 gctttttttg ttctttttta gaaagaggtt cccctgcaac aaccagtttt tcaaactctg
     6601 cgtcttgagc tgctttcata attttcatta tttctctgct cttaacgctt tcatcagctt
     6661 taacaactac ttcttttttt tctaatgaag gttttaaagc cacaagctga ttatataggt
     6721 cgctttcctg tatttgagat ccgtttacaa agaattttcc gtcttttgtt acagaaatcg
     6781 ttgcattttt ctgttctaca gacaatccgc tgttaatctc aggcattttt atgctgctgt
     6841 cattagattg aaatgttggt gctattacca tcattataat caacaacaca agaaaaatat
     6901 ctgtgagcgg tgttatgttt atctctgtaa aaagagcttc tttacctttt gatgttttga
     6961 aagccatttg tttttccttt aatatgaaaa tttattttct tataaagcaa tgtttgtggg
     7021 ttgatttata actacttctt cattgctgtc aacaaagctt aagaagagca atttgataag
     7081 ctgaaagtca tcttcaaatc ttttaaccat ggattggaag tagttgtata aaactactgc
     7141 aacaatcgca acacccaaac ctaaagctgt tgctatcaaa gctgatgcaa taccggaagc
     7201 aacagctgct gattggttac cttgtactgc caaatcctgg aatgtataaa ggattcttac
     7261 aactgtaccg aacaacccta agaacgggca aacaccgcct attgtaccga ggattgttaa
     7321 gtgtgattca agttttcttg ttgcaaggct tgatgcaata tcaaaagaac gtgaaaaacc
     7381 atttttttgt tcagaaaata ttctgacagc ttcttctgaa acttctccga taatcccgcc
     7441 taattgtacg cttaaattct gtgctgaatc aagattgttt cgagcgagtt ctttttgcaa
     7501 tttaggaata aacaaaacaa catctctttt gtttttgttg taatagtaaa atctgtttac
     7561 agcaactgcc actgtcaaaa atgagcagaa gataatcggt gcaacaatcc aaagatcctc
     7621 tatcatagct tttaataata agtccatttg tacgtcctct ttctatttat tattgattac
     7681 tttcttcgtt attttagtat gctgtagcgc caaatacatt atagtcaaat gtaaactgga
     7741 tatctacgct gtctccttta tattccggcg gcaatggttt aaaaggtgct gtaagttcta
     7801 ccgcatgcat tgctgctctg tctgccgcag gaagaccgga ggatttgtat accctgagcg
     7861 aaatcaatct tccatctctg gctattttaa ataagagcac aactcttttg ctttcattac
     7921 cttttggcgg ctcccaattc attttaatcc ttctttggag ttctctcatg taagggccaa
     7981 aatctggttc ttttagtgca tctataccgg gagctccttt agggttgccg ggccccgggt
     8041 taccaacatt gccgcctctg cctgcactgc cgggggagaa tctgccgcct gacgagctgc
     8101 ctccgcttgg agagaagctt ggtgaaggag cagatttact gcctgttccg gctgaaccgc
     8161 ttcttgagcc tgaacctgta ttggaacccg caatcggacc tcctgacgga ccagctactt
     8221 ttggtgcaga aacttttggt acaggtatat tgaaactgcc gcttggttta ttaacttttg
     8281 gagcacttgg ctttactgca ggtcttggtg cagcagcggg agcctttggc acaccttgtg
     8341 gagttggtgg ttttgttgtc ttttgcggtg cccatggcat ttggaatgat tgttgttgtt
     8401 ttttaggtgc agctttttta ggctgttgag cttgcttctg ggcaggctgc tgcgctcttt
     8461 gctgcttttg cggagccttt tgtacaggag cagcctgttg aggtttgctg ggctgtgatg
     8521 ctgcttgagg ttgtgataca ggacgcttag ggtcgtgtat gcctccggct cttgaatttc
     8581 tgtcagatct gtactttgta tttttattaa taggggttcc ttctttattt acaagtacaa
     8641 attcaatatc ctttggcttt tgctgtggtt tttcaaaaac tgaaaaagtt attcccaaaa
     8701 gcgtcaggat aaaaataccc aaccatatta accctgcaac aacagggtgt aatattgctg
     8761 aaaaagcgaa acacttggat aaggatatat cattcttatc ctcttttttg tagataccat
     8821 atgtatattt ggtatctttt atttcttctt cgtcttcttc gtatatattg atgttaccta
     8881 gtaatgtcat ttcttcccca aatctctttt gtcatatagt ttagcaaaat ttaaaccata
     8941 aaacaaatta cccaagtttc ttattagtat tggtaacttt gttgcggtgt aaatgtaatc
     9001 tgttggtcaa ttacaatatt tacttccgta ccagctggca caactgcggg agtccctctg
     9061 tcccacaatg attttgcaag cccggcagtt gcaccaactg ctgtgccgta agctgcacct
     9121 ttgccaactt tgcctccgga aagtggtcca aaaataacgc ctgcaacagc acctgcagct
     9181 gtacctacag ctatatcttt agcgtaatct gttgctgaat ccatttttgt tccgcctttt
     9241 atcaatcctg taccatcatc agtctgaatt tttccggaaa ttggtatcat ttgtccgtaa
     9301 ggtgtaacga tattagtgaa ttttaccatt aattgaccgt ttatacctgc tctgccggct
     9361 ttttttacct gaatgacagt accatttaca gagctgccta ttggtgcaac taatgtgtta
     9421 ttgtagtaga aatttttaga caatgctatg catacactct ggccaagatt taagctttct
     9481 gatgataact ccattgttgc agttgccggg aaagtagtgc ctgaaggtac atatataact
     9541 ttaccctgta acggctggaa ttgttgtgtg tattgtgcat ttgccgctgt attatctgtt
     9601 tgtgcaaaac ctgcgccaat tgtgagcaat gatgctaata ggagtgatga aaccattttt
     9661 tttgttttta cattcatcat atttattcct ccgtttcata atatacattt ttattaacga
     9721 ttatattaat tatattgttc attttttata agtcaaaata aaataaattg aaataaccgt
     9781 catggctggt attaatagaa gaagtctcct acaccaaaag taaatgcacc ttttgatgtt
     9841 ccggcaggta caccggtaag cgggtaaccc cagtctatac ttaaaggtcc gacacccggc
     9901 acaaacactc tcacaccaac acctgctgta atagcatgaa tcggtctatt gtagatttcg
     9961 tttgtaacag tagaaccgta gatttgacca gcatcaacaa acgctgcaat tcttatgtta
    10021 tcaaggaatt tagcatctgt gattctgtcg ataaacggga ttggtgtttg aaactcggct
    10081 gaacccatca taaagccgga acctgtacct ataccgctca ttctgaaacc tctaaccgta
    10141 taaggaccac ctaatctgta tgccattact tcaggcatat ctccgtggat tttccctcct
    10201 gctctaaagg caagtgatac ggacgatttt ttcgccacag gataatatct cttgatgcta
    10261 ccgcttaatt taccgaatgt gttttcaaat ccgtctaaag caatttgttc atcaaagcgt
    10321 acgttagcaa ataccccttt tctcggtagt gttgtgctgt ctctcgtgtc gtaaattaag
    10381 ctgggtgata aagaaaggaa taaaccgcct tgtaattgtt ttgcacgttc tgatatggga
    10441 atattatgtg cagcatacaa gctggcaatc tggtttccgt caccttcttt aacatgtaca
    10501 ttctctatgc ctacaccaaa tgagcctgtc agatgaggat agtttgtaaa tgctcttgat
    10561 attgttgatt caataccaaa acgttgttca actgcgagag gaatctggta gctggcaaag
    10621 tcacgtccaa aagctttaac cattaaagaa ttatctgttc ctctaaattt tggttcaaac
    10681 cagctcaatt ctgcttgtaa gtttgctctg tttaacatag agctgtctgc cataactaca
    10741 cctgtaccgg ctaacaagct gagagaaact ctttgaccta aaccacggaa gttgttatcc
    10801 gtaaatcctc cggtaccaaa caaacctgtt gcggtatcaa gaccaccgcc tatagaaatt
    10861 gttcctgttc tctgttcttc aagatgtatt gttacatcat atacatcagg attctcttca
    10921 ttgcgttcta ttgttctttt tacatctttg aatgcctgag ttccgtataa tctcatcaaa
    10981 tcctgtttta ttaggttttc attataaatg gtgccaggct gtgttaaaat gtttcttttt
    11041 acaacaaatt cttttgtttt tttgttgcct tcaataataa tggcgccgat tttgccttcg
    11101 tctattgtta aatttaccat accgtcagga tcgtctgtta tgctggttac tcttgccaga
    11161 atataaccct gacttgcata atattcctgt atttctgtta ttgcctcatt caatttaaga
    11221 atattttgag gcttgttcat taacgggttg agaatttgca acaagtcgcc tgttgctaca
    11281 gaattgttgc ctgtaatgtt gaagtctgtg attggaatgt tttcttgaac aattattttt
    11341 aattttatat ttttatcatc aatttttaca gggatagctt tcattttttc gctgaaatat
    11401 cccatatcat atatagcttt aagattttgc tgcacaatat caacgctgta tggatcaccg
    11461 gcttgaattt ttacaaattg catgatttct gatgtatcaa ccagattatt ccctgtgatt
    11521 tcaacagaat gtacttaaat atcagaggat gattgtgttt tttctgcttg taaatttttt
    11581 gtatcaggct gaagattttc ccataaagag tcttgcctgt tttcttcatt ttcttccgga
    11641 acaggttgtt ccatttgttt atttttttgc caaaatttcc attttggagt tgcagctaaa
    11701 gaagggcatg attgtcccat tatcatcccc agcgctaaaa gcattatgac tgtcttattt
    11761 ttaacgactg aaattgtcaa attcctatct cacatacttc tgataaaatt ataccttcaa
    11821 aatgaaaaag tacaaaatgt aaatggtaaa ttttcgttaa ttgttaccat tctgctacac
    11881 aataggatta aaagaagaat tgttttggtt gagaatgagt ttagtgagag aattagagta
    11941 ttgtttgtta agagcgagaa tagcctcatt gatgagctgg tattgttgtt cgagttgttt
    12001 aaggtattcg ctgagccctt cagtggagtc agtgcccatg gcgatatttt tgagctcatt
    12061 gaggtcaaag gtagtggaag taatttcttt tttgatagct ttttgttgag actcgagtag
    12121 tcttggggta actttaaagt aaccgtttct gttgcttttg aggttggtat gaagcacatc
    12181 ggagagtctt gtaaagacgc cagcgacggt gttatcgaga ggttgagagt agtcaccgag
    12241 aatgatatcg aagacttttt gcggattttg gtagaaggct tcgacgtagt catattttcc
    12301 atcagtttta gagagggaca tatgaacaga gcccatgttg gagtttgtgc cgccggtaac
    12361 tttgacgata ataccgatat cagcgagttg ttgagtaatt ttgttgtatg caccgacgtt
    12421 agaagtgaga gccgatttaa ttttattgat aaaagcggcg aattcagagt catccgagag
    12481 tattggattt tcagatgcat tcatagctga gttaaattta ttgacaaagt tttggagttt
    12541 agaaacgctg tcattgagaa ggttgttacc gatatcgata gtagtttgtc cggttttttt
    12601 gagttcgatg gtaatggcag catcgttggg gtcggttaca acgttgccgt ctttgtcgag
    12661 gtagatgagg ttgttgccgt tgtagatgcc gtcatcagtg atatcgttga ggtctagagc
    12721 catgtcgtag tctttgccgt tgatattgaa gtgagcattt tgccccagtt ctgttttacc
    12781 gaggtcaaca gagtttctgt agttttcggt taatttagct atttcggtaa agtttgtgga
    12841 accggcttcg acctcgattc ttgctgttga ggaggcttgt ttagtacgca gagtcagttc
    12901 accgttttca tatgaagcga tgattctgga gtcagcatat ttagggtcag agaagacgga
    12961 attaattctt gcggcgaggt cgtagatggt atcgctggct ttaacgagga tatccacgcc
    13021 attaattctg aatgtaccgt ttttgacgcc gatagagccg agggtcatgg agtctctaac
    13081 gaggaggtcg ccgaggccgt cgctagtgag gactgtttgt gtagcggcgt cgccctgggt
    13141 tgtatcgccg atgtagttgc caccggaagt gaggcctatt ttgttagtaa agtcagagga
    13201 gcctttgata atttcgaagg agcctgctgc ttgatcctgg tctcttgtta agactagttt
    13261 tccattgacg atggaggcgg ttatgccggc atttttggag ttaattgtat tcacgattgt
    13321 tgcaacgctg tctactgctc cgtttattcc gcttgttccg acatctattt ggatgaggtc
    13381 gcctttgctt ccgtctttgt tgtacatctg gatgtagaag tttcctgcgc tatatccgct
    13441 gctctctgct gtgttgac
//
LOCUS       DABS01000191            3506 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15860, whole genome shotgun sequence.
ACCESSION   DABS01000191 DABS01000000
VERSION     DABS01000191.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3506)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3506)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3506
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            7..285
                     /locus_tag="CPT85_08745"
     CDS             7..285
                     /locus_tag="CPT85_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015738271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20928.1"
                     /translation="MVRQWQEKLYHKHYSETKISGPDFVKVAEAYGARGFRVTKEEEI
                     IPVLQQAIECKQPVFIDFVVDEYEMVYPWVLAGNPLNKVLLSNDCPIN"
     gene            300..833
                     /locus_tag="CPT85_08750"
     CDS             300..833
                     /locus_tag="CPT85_08750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018049213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="DAB20925.1"
                     /translation="MNNKNHVISVLVKDEAGIVSRVSGLFSGRGYSIESITAAQTNEK
                     GYARLTIETSGGDADVIEQITKQLNRLIPVLKVIDLGDVESIERELILCKVNAKDEDR
                     SEILRIAEIFGAKIIDVTPRTYTLQAIGDERQIRSLIELLRPIGIRELVRSGKVGITR
                     ANQFATTGSTNGTPKAE"
     gene            835..2223
                     /locus_tag="CPT85_08755"
     CDS             835..2223
                     /locus_tag="CPT85_08755"
                     /inference="COORDINATES: protein motif:HMM:PF13552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20926.1"
                     /translation="MAGLNIAFIPIDNRPVCYTLAQQIAAIDRDLALFLPPREMLGDL
                     NRSADINGIFSWLKKLENIDSIVVSLDTIAYGGLIPSRRSSETFEEIKKRMESFFALL
                     REKNTKVYAFSSIMRISNNNINEEEKEYWSLYGEKIFKYSYELHKNAPDTDVKADVPP
                     EIIQDYLKTRQRNFEINKMYLNLSKQGVFETLVFSKDDCAQYGLNVGEAQVLEESIRA
                     NALNALVKTGADEIPLSLLSRALAGGRVIKIAPVFTQKDYTNRISKYEDVSVSDSVRG
                     QIELAHCEVADVLDADIILVVNNFKQEQGELVMGVDVEGFDGEIELPQKPYLIADILN
                     ANGADNSFVKKFFEKQIDWDKFLGYAGWNTTGNTLGSALCCAIVKFLANNPDEAAFKK
                     VQAVRFLDDWAYQANVRKALKLRFDKPDIEALKTLMQPFEKTLQEKTGLDLTTTKYSY
                     PWNRFFEIEVSV"
     gene            complement(2224..3501)
                     /locus_tag="CPT85_08760"
     CDS             complement(2224..3501)
                     /locus_tag="CPT85_08760"
                     /inference="COORDINATES: protein motif:HMM:PF12055.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20927.1"
                     /translation="MKLLEMQRQAMLMYTSCGWFFADISGIETTQIMKYAARAMQLAA
                     NFTQQDFETEFVNILSGAQSNIKEFGTGAXKFVKPSVVTIKQIASLWAIVSLYEETDD
                     ETSLYCYDIKRLNYKTVSKGKNSLYIGRVQIKSQITLEKFDLIFALLKYSGGDFHCAI
                     KEYSSAEEFAEIQKNLTSTFVNYPLTEIIRSLDENFGTEYYTLKDIFIEERRKILNIM
                     IQGKTNKFSGLYKDIYEDGKASIFHFKNLGLNPPDEFKIAARYVLGIEFNKQLEASEK
                     SLNDHEMQEAIDIHNEAKMLGVKLDKRLANTIFTEKVTDAMYALSKNPEIHTIEAVLS
                     LFRYVEALELRIDTSESQNIYFNKIHEILEDVVSNIDELKDDYDRKFVLLLLELGNKL
                     NINTDFYKETFDKAMSPLTAAMKELKDKNKDKN"
     assembly_gap    3282..3283
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT          986 a          665 c          814 g         1039 t
ORIGIN      
        1 ctcggtatgg tgcgccagtg gcaggaaaaa ctctatcaca agcattattc cgaaactaaa
       61 atctccggcc ctgattttgt aaaagtggca gaggcgtacg gtgcacgcgg tttcagagtt
      121 acaaaagaag aggaaatcat ccccgtattg cagcaggcca ttgaatgcaa acaacctgtg
      181 tttatagatt ttgtggtgga cgagtacgag atggtttatc cgtgggttct ggcaggcaac
      241 ccgcttaaca aggtgctttt gtccaacgac tgtccaataa attaacataa ggatttaaaa
      301 tgaacaataa aaaccatgta atatcagtac tagttaaaga tgaagcgggc atagtctcgc
      361 gcgtaagcgg cctgttttca ggcagaggct acagcattga gagcattact gccgcacaga
      421 caaacgaaaa gggttatgca agactcacaa tagaaacctc gggcggcgat gctgatgtca
      481 ttgaacagat tacaaaacag ctcaacaggc tcatccctgt gttaaaggtt attgaccttg
      541 gcgatgtgga gtctattgag cgcgagctta tactgtgcaa ggtgaatgca aaagatgagg
      601 accgctctga aatattgagg attgcggaaa tcttcggtgc aaaaatcatt gacgtaaccc
      661 ccagaaccta tacgctgcaa gcgattggtg atgaaagaca aatccgttct ttaatcgagc
      721 ttttgcgccc tatcgggata agagagcttg tgcgctcggg caaagtcggc attacgcgtg
      781 caaaccagtt tgcaacaacc ggcagcacaa acggcacacc aaaggcagaa tagtatggca
      841 ggtttgaata tagcgtttat tcccatagat aacagacctg tgtgctacac tctggcacag
      901 cagattgctg caattgacag ggatttggct ctgtttctgc ctcctcgtga aatgctcggt
      961 gatttgaatc gcagcgctga tatcaacggc atttttagct ggcttaagaa gcttgaaaat
     1021 attgacagta ttgttgtttc cctcgacaca attgcatacg gaggattaat accttcgcgc
     1081 cgttcaagtg aaacttttga agaaataaaa aaaagaatgg aaagtttttt cgctctgtta
     1141 cgggagaaaa atacaaaagt atatgctttc tcaagcataa tgcgtatttc aaacaacaac
     1201 ataaacgaag aggaaaaaga atactggagc ctttacggcg aaaagatttt taaatattcc
     1261 tacgaattac acaaaaatgc gcctgatacg gatgtaaagg cggatgtgcc gcctgaaatt
     1321 attcaggatt acctcaaaac aagacagaga aactttgaaa taaacaaaat gtatctcaat
     1381 ctgtcgaaac agggggtgtt tgaaactctt gtgttttcaa aagacgactg cgcacaatac
     1441 ggactaaatg tgggcgaggc gcaggtgctt gaagagtcta tcagagcaaa cgctctcaat
     1501 gctcttgtta aaaccggtgc ggatgaaatc ccccttagcc tgttgagccg tgccctggca
     1561 gggggaaggg taatcaaaat agcacccgtg tttacgcaaa aagattatac aaacagaatt
     1621 tccaaatacg aagatgtgag cgtgtcggat tctgtcaggg ggcagattga gcttgcgcac
     1681 tgcgaggttg cggatgtttt ggatgcggat attattcttg ttgtaaacaa tttcaaacag
     1741 gagcagggtg aacttgttat gggtgttgat gttgaggggt ttgacggcga aattgaactg
     1801 cctcaaaaac cttatttaat agctgatatt ctcaacgcca acggcgcgga caacagtttt
     1861 gtcaaaaagt tttttgaaaa gcaaattgat tgggacaagt ttttgggtta tgccggctgg
     1921 aacacaacgg gcaacacttt aggcagtgca ttgtgctgtg cgattgtcaa atttcttgca
     1981 aacaatccgg acgaagctgc ctttaaaaaa gtgcaggcag tgcgttttct tgatgattgg
     2041 gcttatcaag caaatgtgag aaaagccctc aagctgcgtt ttgacaagcc tgatattgag
     2101 gcgttaaaga ctttgatgca gccttttgaa aaaactctgc aggaaaaaac agggcttgat
     2161 ttaaccacga caaagtattc ctacccgtgg aacagatttt ttgaaattga agtatctgtt
     2221 tagttagttt ttgtctttat ttttgtcctt gagctctttc atagctgctg tcagaggtga
     2281 cattgctttg tcaaaggttt ctttgtaaaa atctgtgtta atgttcaatt tgttgccaag
     2341 ctctaaaagc agcagcacaa attttctgtc atagtcgtct ttgagctcgt caatgtttga
     2401 gacaacgtct tccagtattt cgtggatttt gttgaaatat atgttttgag attctgacgt
     2461 atcaatgcgc agctcaagcg cttctacgta tctgaacagg cttaagacag cttctattgt
     2521 atggatttcc ggatttttgg acaaagcata cattgcatct gtgacttttt ctgtaaagat
     2581 agtgtttgca agccttttgt cgagttttac acccagcatt tttgcctcgt tatggatatc
     2641 aattgcctct tgcatttcgt ggtcgttgag tgatttttca gaggcttcca gctgtttgtt
     2701 aaactcaata ccgagcacgt atctagctgc aattttgaac tcgtcaggcg gattgaggcc
     2761 aaggtttttg aagtggaaaa tagaggcttt tccgtcttcg taaatatctt tgtaaaggcc
     2821 tgaaaacttg tttgttttgc cttgaatcat aatgttcagg atttttcttc tttcttcaat
     2881 aaagatatcc ttgagcgtgt agtattctgt gccgaagttt tcatcaaggc ttctgatgat
     2941 ttctgtgagc gggtagttta caaaagtgga ggtaagattt ttttgaattt ccgcaaactc
     3001 ttctgctgaa gaatactctt ttattgcaca gtggaaatcg ccgcccgagt atttgagtag
     3061 agcaaatatc aggtcgaatt tttctagagt aatctgtgat tttatctgta cacgtcctat
     3121 gtagaggctg tttttgcctt ttgatactgt tttgtaattt aaacgcttga tgtcatagca
     3181 gtacaggctt gtttcatcgt ctgtttcttc gtagagcgaa actattgccc acaggctggc
     3241 tatttgtttg attgttacaa cggaaggttt tacaaatttt cnngcaccgg tgccaaactc
     3301 ttttatgttg ctttgagcgc cggagaggat gtttacaaac tctgtttcaa agtcttgttg
     3361 cgtaaagttt gccgcaagct gcattgcacg ggcagcgtat ttcataatct gggttgtttc
     3421 aatgccggaa atatcagcaa agaaccagcc gcagcttgtg tacataagca ttgcctgtct
     3481 ttgcatttca agaagcttca tcgcag
//
LOCUS       DABS01000192            4064 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_20254, whole genome shotgun sequence.
ACCESSION   DABS01000192 DABS01000000
VERSION     DABS01000192.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4064)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4064)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4064
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            15..1250
                     /locus_tag="CPT85_08765"
     CDS             15..1250
                     /locus_tag="CPT85_08765"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014042044.1"
                     /note="catalyzes the reaction of glycine with
                     5,10-methylenetetrahydrofolate to form L-serine and
                     tetrahydrofolate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="DAB20906.1"
                     /translation="MKKVDPAVAEAIEKELDRQRNTIELIASENFTSPAVMAACGSVL
                     TNKYAEGKPHKRFYNGCENVDVIEELAQKRACELFKMDHANVQPHSGAQANMAVFMYA
                     LNIGDTVLGMDLSNGGHLSHGSPVNFSGINYNIVSYGVNDNGEIDYDEVEKLAKEHKP
                     KMIIAGASNYSKIIDFKRFREIADMVGAYLMADIAHIAALVAGGVHPSPAGYAHFVTT
                     TTHKTLRGPRGGIIMCDEEHAAGIDKAVFPGMQGGPLEHIIAGKAIALKEALDPSFKE
                     YAAQIVKNAKALANGLMDEGMDIVGGCTENHLMTLDLRKFNKTGKDIANVLEKVGITA
                     NKNTVPNDPQSPFVTSGVRLGAAAVTTRGFKEDDMVEVAKIIAGAVVASDNETALNNL
                     KERSLKLCKKYPLYEGMHV"
     gene            1250..2281
                     /locus_tag="CPT85_08770"
     CDS             1250..2281
                     /locus_tag="CPT85_08770"
                     /inference="COORDINATES: protein motif:HMM:PF00953.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20902.1"
                     /translation="MISLKLSDAHILGMIMAYLLGFFIMPFVIYFAKKNNLIDKPNER
                     KIHHGPIARLGGVAIWSSVMLSFLFLVILSYYPYGKLLSGILLGGSLMFLLGLIDDIY
                     GLNAKFKLMIQIAIASIVFFLGISVNTIYNPFGAPIHLGLVLSYIVTILWIVGISNAL
                     NFIDGVDGLAGSIVTISSVTLGLIAVAMTPTNAISALIAFILAGSMLAFLTYNFHXMG
                     DSGALFAGFLLATLSITGVMKSPELTMFVPFFILSVPIIDITFSSLRRIAKGVSPFTP
                     DAEHLHHKLLHAGCSQNQTVLILSTVAVVSGAIASFIVGTPLKFFVYAILISVIMLLL
                     SFMASKNKE"
     assembly_gap    1896..1897
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2310..2552
                     /locus_tag="CPT85_08775"
     CDS             2310..2552
                     /locus_tag="CPT85_08775"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20903.1"
                     /translation="MGKAKKRNFKTCVNQGGAMGALPSTFTREEAVSFVIEKIKSNDL
                     GPQTKDIISLFGIKAEELSEAGASYEDLLALKSVLF"
     gene            complement(2549..3475)
                     /locus_tag="CPT85_08780"
     CDS             complement(2549..3475)
                     /locus_tag="CPT85_08780"
                     /inference="COORDINATES: protein motif:HMM:PF00809.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltetrahydrofolate--corrinoid
                     methyltransferase"
                     /protein_id="DAB20904.1"
                     /translation="MKLISENLHIISKSTKEAVLNRDEIYIKNLLQKQIETSPDWIDL
                     NIGPARGAFAGTMQWLVSLAQDMTSIPLSLDSTNADEIELGMSLAKNSENWIINSTSA
                     DLTRLNRVTDIAAKYGCNIIALTMNSELGIPKESDKRLELAFEITAVTEEKGIENNKI
                     YFDPLILPVCVDQTQAAEALNTIRMLKESFDPQVMTTIGLSNVSNGCPKELRPLINRV
                     FMVLAMGCGLDSAIVDSFDSELLRINHVIEQQTPQNSHDKLYLNLYDMMQAFEDTDSI
                     EYDKTDIEQIKIFKTAEILLNKKVYSNSYLEI"
     gene            complement(3475..>4064)
                     /locus_tag="CPT85_08785"
     CDS             complement(3475..>4064)
                     /locus_tag="CPT85_08785"
                     /inference="COORDINATES: protein motif:HMM:PF02219.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="5,10-methylenetetrahydrofolate reductase"
                     /protein_id="DAB20905.1"
                     /translation="KTLKSLDVKNILALRGDMPENQKIYNDFKYASELVEYLKKESSL
                     SIAVAGYPEGHKECESIEKDIQYLKQKVDNGADVIFTQLFFNNSHFISFVEKCEKQNI
                     TVPIIPGILPVTNYKTLEKMSTLCKVEVPAKMAQVLEKHKDDKDYIKQYGIEYASLQC
                     KELLETGVKGLHFYTLNKAYATSEILKNILYTRTN"
BASE COUNT         1147 a          718 c          795 g         1402 t
ORIGIN      
        1 tggaattaga tgttataaaa aaagttgacc ctgcagtggc agaggctatt gaaaaagaac
       61 tggacagaca aagaaataca atcgagctta ttgcaagcga aaactttact tcccctgcag
      121 taatggcagc ttgcggttct gttttgacta ataaatatgc tgaaggcaaa cctcacaaaa
      181 gattttataa cggttgcgaa aacgttgatg ttatcgaaga attggcacaa aaaagagcat
      241 gcgagctctt caaaatggac cacgcaaacg ttcagccaca cagcggggct caggcaaata
      301 tggcagtgtt tatgtatgca ttgaatattg gcgatactgt gcttggcatg gatttgtcta
      361 acggtggcca cttaagccat ggctcacctg ttaatttttc aggtattaac tacaatattg
      421 taagctacgg agtgaatgat aacggcgaaa ttgactatga tgaagttgaa aaacttgcaa
      481 aagaacacaa acctaaaatg attattgcag gtgcaagcaa ctactctaaa attattgact
      541 ttaaacgctt tagagaaata gctgatatgg tcggagctta tctgatggca gatattgctc
      601 atattgctgc tcttgttgca ggcggtgttc acccctctcc ggctggatat gcgcattttg
      661 ttacaacaac aactcacaaa acattaagag gtcccagagg cggtattatt atgtgtgatg
      721 aagaacacgc agctggcatt gataaggctg ttttccccgg tatgcagggc ggccccttgg
      781 aacatattat tgccggtaaa gcaattgctt taaaagaagc tcttgatcct tcttttaaag
      841 aatacgctgc tcaaattgtt aaaaatgcta aagctcttgc taacggtctt atggacgagg
      901 gtatggatat tgttggcgga tgtactgaaa accaccttat gacattagat ttaagaaaat
      961 tcaataaaac aggtaaagac attgcaaatg tgcttgaaaa agttggcatt acagcaaaca
     1021 aaaacactgt acctaatgat cctcaaagcc cgtttgtaac aagcggtgta agacttggtg
     1081 cagctgctgt tacaacaaga ggttttaaag aagatgatat ggttgaagtt gccaaaatta
     1141 ttgcaggtgc tgttgttgct tctgacaatg aaacagctct caacaacctc aaagaacgtt
     1201 ctttaaaatt atgtaaaaaa tacccgttat atgaaggaat gcatgtataa tgatttcact
     1261 aaaactgtct gacgcacata tactcggtat gataatggct tatcttttag gcttttttat
     1321 aatgccgttt gttatttatt ttgccaagaa aaacaacctt attgataagc ctaatgagag
     1381 aaaaatccac cacgggccga ttgctcgtct tggtggtgtt gccatatggt ccagtgtaat
     1441 gctctctttt ctttttcttg taatattgag ctactatcct tatggcaaac ttttatcagg
     1501 aattttgtta ggcgggtcgt tgatgttttt attagggttg atagatgaca tttatggact
     1561 caatgccaaa tttaaattaa tgatacaaat agctattgcg tctattgtgt tctttttggg
     1621 tattagtgtt aacacgattt acaatccgtt tggtgcaccg attcatctgg ggcttgtttt
     1681 gtcatacatt gtgacaattc tgtggatagt gggaatttcc aatgcactca attttattga
     1741 cggtgtggat ggccttgccg gttcaattgt aacaatttca tctgttacat tgggtttgat
     1801 tgctgttgca atgactccga caaatgcaat aagcgctttg attgctttta tactcgcagg
     1861 ttcaatgctg gcatttttaa cttataactt ccatcnnatg ggtgattccg gcgctttgtt
     1921 tgcgggattt ttacttgcga cactttctat aacaggtgtt atgaaatcac cggaattaac
     1981 tatgtttgtt ccgttcttta ttttgtctgt tccgattatt gatattacgt tttcttcttt
     2041 gagaagaatt gcaaaagggg tttctccctt tactccagat gcagaacacc ttcatcacaa
     2101 acttttgcat gcaggttgtt ctcaaaatca gactgtattg atattgtcta ctgtagctgt
     2161 tgtttccggt gcaattgcaa gttttattgt cggcactcct ttaaaattct ttgtttatgc
     2221 gattttgatt tctgttataa tgctgttatt aagctttatg gcaagtaaaa ataaagaata
     2281 gggataaaag gctacaacag tatcgtaata tgggtaaggc gaaaaaacgt aattttaaaa
     2341 cctgtgtaaa tcaaggcggg gccatggggg cattgccttc tacttttacg cgtgaggaag
     2401 ctgtatcttt tgttattgaa aagataaaat ccaatgactt gggcccgcaa acaaaagata
     2461 taattagcct ttttggtata aaagctgagg aactctccga agcaggagca agttatgagg
     2521 atttgcttgc tttaaaatct gtgctttttt aaatctctaa atagctgttt gaataaactt
     2581 ttttattaag caggatttct gctgttttaa atatttttat ctgttcaata tctgttttgt
     2641 catattcaat agaatctgta tcctcgaatg cttgcatcat gtcatataaa ttcagataaa
     2701 gcttgtcatg actgttttgc ggagtttgtt gctctatgac atgattgatt cttaaaagct
     2761 cactgtcaaa agagtctaca attgcactat ccaggccgca tcccattgcc agcaccataa
     2821 atactctgtt tattaacggg cgcaattcct tcgggcatcc gtttgatacg ttggaaagac
     2881 caatggttgt cattacctga gggtcaaaac tttcttttag catacggatt gtatttagtg
     2941 cttctgctgc ctgtgtctga tcaacacaca ccggcagtat taaagggtca aaataaattt
     3001 tgttgttttc aatacctttt tcttccgtaa ctgcggtaat ctcaaaagcc agttccagcc
     3061 tcttgtcaga ctctttgggt attccaagtt cactgttcat tgtaagagct attatgttac
     3121 atccgtattt tgcagctata tctgttacac ggttgagtct tgtaaggtct gcacttgtac
     3181 tgttaataat ccagttttca gaattttttg ctaacgacat accaagctca atttcgtcag
     3241 cgtttgtact gtccaatgaa agaggaatgc ttgtcatatc ctgggcaaga gatacaagcc
     3301 actgcattgt gcctgcaaaa gctcctctgg ccgggccaat attgaggtct atccagtcgg
     3361 gagaggtttc tatttgcttt tgcaaaagat tttttatgta tatttcatct ctgtttaaaa
     3421 cagcttcttt tgtgcttttt gatataatat gtagattttc tgatataagt ttcattagtt
     3481 tgtccttgta tacaaaatat tttttagtat ttccgaagtt gcatatgctt tgtttaacgt
     3541 ataaaaatgc agacctttta ctcctgtttc tagcagttct ttacactgca aggacgcata
     3601 ttctatacca tattgtttta tgtaatcctt gtcatctttg tgtttttcca aaacttgagc
     3661 cattttagcc ggtacttcca ccttgcatag tgtggacatt ttttcaagtg ttttataatt
     3721 tgttaccggc aaaatcccag gtattattgg tactgttata ttttgttttt cgcacttttc
     3781 aacaaaagaa ataaaatggc tgttgttaaa gaaaagttgt gtgaatataa catctgctcc
     3841 attatcaact ttttgtttta aatattgaat atccttttct attgattcac attccttgtg
     3901 tccttcagga tagcctgcaa cagcaatgga aaggctgctt tcttttttta aatattcaac
     3961 aagctccgaa gcgtatttga aatcgttgta tatcttttga ttttcaggca tgtcccctct
     4021 taaagcaagt atgtttttca catcaagtga tttaagagtt ttta
//
LOCUS       DABS01000193           12780 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13582, whole genome shotgun sequence.
ACCESSION   DABS01000193 DABS01000000
VERSION     DABS01000193.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 12780)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 12780)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12780
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..1680)
                     /locus_tag="CPT85_08790"
     CDS             complement(<1..1680)
                     /locus_tag="CPT85_08790"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20877.1"
                     /translation="MADPIIVNQIIKAMGLNGQAEQEKRAELEKLSNAELTKILSNSK
                     EFDKTSTGVFLSLDYNNWDKNIKMFNPEIIAFQDTDFSSSSSNEKVYTSTQQKELDRF
                     LGDFLYDSSTAGLTEITDYNKNVGWANITDRAVNGFKVLTGQEDRIALQNRLSEEQKE
                     SKKLKDIANKRPAVFESMIERKYGVPYSHKNVEALKNKAEEYTRITAHHEKYQQLSQG
                     LKELKNIIREEQEYNQARKNLKGPALAALTPPKTSSNQKFGEIMLNFCNGDKELLNTY
                     MQKLNADYSSRDEIVKDYPNIISNLETQMKTAYEKELNGKDYALYTNEFNSACQRVIG
                     RKDAKTAAKNFVENAKTQAAYTEIGLTIATSLLLPGSSAVKATAQKLGPQGVKAAMTF
                     TMGAAPATLETLNAATSEAGFTDENIDAIKEKFKNGMLYGSFGAYASGPLGQAVEKVL
                     SKNPAVFSNIVSKTMAATTETTADVLFDRMTSDLSFIESLKQNGGLNFGMMFAGGILS
                     KGLKKNLQELTVTKNSDGSFSLKDTTGKEILNNADENTLMGYLFGQAVKETK"
     gene            complement(1774..2142)
                     /locus_tag="CPT85_08795"
     CDS             complement(1774..2142)
                     /locus_tag="CPT85_08795"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20878.1"
                     /translation="MKTNLLLTALIFCAFTMQANAASMFDESGNYSGNWKQMTNVSSG
                     KSTSSYSSSSYSSSAWYANNKKERVSKDTSYSAQSYTQANTVPFRYNTLNYTRVRKVK
                     GGYGDYNAKCSDIGDVSFCH"
     gene            complement(2164..2949)
                     /gene="amrB"
                     /locus_tag="CPT85_08800"
     CDS             complement(2164..2949)
                     /gene="amrB"
                     /locus_tag="CPT85_08800"
                     /inference="COORDINATES: protein motif:HMM:TIGR04336"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="DAB20879.1"
                     /translation="MLTIKNPDFDGKFYPKDTVELENQLEKMLHNTHFETAVKARGLI
                     VPHSGYFYCGQLAADTFKYLDRHLKNIFILAPAHYMEIKGIVICNTLKFSTPLGQISV
                     NSLLNNSLLNFPEVFIDNAAFEKEYGIEVLLPFIQKLLPEARIIPIVYNVRKHCVLQK
                     IIENYFDEKTNAFIVSSDLSHYYPREIAEKLDEYTARLIESGDIKNLLPSQACGSKAI
                     MALTEFAVSRGYSLKRVKLANSAAKNHDDASVVGYGGWYLFDG"
     gene            3041..3625
                     /locus_tag="CPT85_08805"
     CDS             3041..3625
                     /locus_tag="CPT85_08805"
                     /inference="COORDINATES: protein motif:HMM:PF00583.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20880.1"
                     /translation="MLKLEPVEIQNFKDVYEDMLEQFPACEMKDYNTFINLFEQGQYK
                     LLSVVDDNVRIGYLLLYESSVENVLWLDYIAVFRQYQSKGYGRMIFDSLINQFNTYKG
                     IYLEVEKADESVINTIRRIKFYKSLGAKKLDINYFYPNKDGCIELDLYFLPFCKAELP
                     LKEVSFRVIKDVFNALHKELRHIDNVYCKITGQY"
     gene            complement(3622..5274)
                     /locus_tag="CPT85_08810"
     CDS             complement(3622..5274)
                     /locus_tag="CPT85_08810"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02518.24,HMM:TIGR00229"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20881.1"
                     /translation="MIRKKIYRQILFYVLFALFICWTVIEPEIHLSVKYGCLIILFVF
                     LIHSLVEKRHLYKKLSVKYKNRSDLLNSIFMNCPDLIYMKDSDLRYIDCNPVMKKMLC
                     IDNESSIAKKTDFDFYSKETADTIRSYDKKVIDNAGIVSYKIEKQMFNGETKIYDSLL
                     APIVKKDEISGVLGILRDVTTVEQLKERILIQNAQLNSILDNIPFMLYMKDLEGRVIT
                     CNSRVEKNIGISREKLIGLPSTNIYVENNAEKIKQEDEQVIKTKQALIIEVQSSTYTN
                     TPVWYEVTKSPILDINNDIIGIIVIVKNIDSEKRREEQERILMSTITHDLKTPTNAQI
                     TAMDILLKETLGKLNDDQREIIQHSKNSNVYMKNMISTLIAAYKSEIQSIILEPQTFD
                     YEDLVKTTIQELSMLAYTKNQNLVLESSLKDNMVTADKLQLKRAMINLIANAITYGFE
                     NTNIVISLKEVDENVSFDVTNNSHFIPQEKLAEIFEKFKTNVNAKFEKASTGLGLYLS
                     KKIITKHNGQMRAQSFENQTCIFGFTVPRVFKEEKSQSKTTY"
     assembly_gap    5315..5344
                     /estimated_length=30
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<5345..5944)
                     /locus_tag="CPT85_08815"
     CDS             complement(<5345..5944)
                     /locus_tag="CPT85_08815"
                     /inference="COORDINATES: protein motif:HMM:PF00196.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="DAB20882.1"
                     /translation="MAIDKKISIYVVEDYLLIRKSLIHILTKEPNFEVLGDFENAETF
                     LEVFSKHPSDVVLMDLGLTGMNGVAATKIIKEQHPETKVVILTSHDESEEVMAALFYG
                     ASAYCLKDIDSSKLNSVIMDVANGDLWLDSKIAYVAKDFAPKPCSTDLKNLYKDKKVI
                     NSLTEREREVLKYIVDGKSNTEIAEEMFISMHTAKAHVGN"
     gene            6169..6834
                     /locus_tag="CPT85_08820"
     CDS             6169..6834
                     /locus_tag="CPT85_08820"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20883.1"
                     /translation="MVYVIWLRIITHKSKNCVKLEKGDKNEKNIVNYTYGGXLSALFS
                     VPAMAACPVKAQTPCAKKCDKPAPPMECKKPMSPEERAKMREARKADFEARLQLTESQ
                     KAQLEKIKADEKKALAPYKEKIAKERAKMNELFEKERAIRTESMKKFEATLTADQKAE
                     LEKIKEEMKAEMEQMGPRGPHHPKFGPKPVCPPDCGCSCHDAKAKEPADCNCPCHKAP
                     AKK"
     assembly_gap    6279..6280
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(6876..7194)
                     /locus_tag="CPT85_08825"
                     /pseudo
     CDS             complement(6876..7194)
                     /locus_tag="CPT85_08825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007755076.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    6989..6990
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7183..7395
                     /locus_tag="CPT85_08830"
                     /pseudo
     CDS             7183..7395
                     /locus_tag="CPT85_08830"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    7361..7379
                     /estimated_length=19
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <7380..8009
                     /locus_tag="CPT85_08835"
     CDS             <7380..8009
                     /locus_tag="CPT85_08835"
                     /inference="COORDINATES: protein motif:HMM:PF04402.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="DAB20890.1"
                     /translation="QNQALSVTGSASKEIKSDIAVWKAYYEVRSKDLKSGYTKINADK
                     AAVKDFLVANGMKEEDIKFTPVSSYPVYKKLSNGYDSNDVDGYRLSQNVQVSNSDVDK
                     VTKISQDVVKLVDKNVEITSNTVDYFVSNLDQLKIEMLAQATKDAKQRAESMVKSTGS
                     HIGVMNSAKMGVFQIVAKDSTDVSDYGIYNTTARDKKINAVVNATFTIK"
     gene            8014..8937
                     /locus_tag="CPT85_08840"
     CDS             8014..8937
                     /locus_tag="CPT85_08840"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="DAB20884.1"
                     /translation="MNKVKNVIICGLGAIGTIYAARIADAGNINLKILLDEERIEKYK
                     TNPTVFNNKEYSFDYITGDYCGFNADLIIIATKNSGLMEAVDAVKNFVNENTVFISLL
                     NGISSEDVISSVYGFDKVLYSYYIGHTSTRQGRSIVHDGVYKTVFGEKDNQQLSKNVL
                     KIKEFFDSTGIPYEIPVDMDYSRWWKFLVNVGYNQASAVLNASYGVFQNSERANNLAI
                     NLMQEAADLAKAMGVKNTHQLIAQVLDVIKTMLPETRTSMLQDIDAKRQTEVGIFAGY
                     IVESAKKYSIPVPYNKVVLDIISAIDEKNAL"
     gene            complement(8941..9192)
                     /locus_tag="CPT85_08845"
     CDS             complement(8941..9192)
                     /locus_tag="CPT85_08845"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20885.1"
                     /translation="MGEKAFECADILKPLLKKYLIIGFSLVIAINITINVAGFCCIYY
                     KLKKKIYHTHFMTRGTLEKLHNVDITLDKSTGQMEIKKH"
     gene            complement(9250..9888)
                     /locus_tag="CPT85_08850"
     CDS             complement(9250..9888)
                     /locus_tag="CPT85_08850"
                     /inference="COORDINATES: protein motif:HMM:PF01381.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="DAB20886.1"
                     /translation="MSQGKDRIKQIRKSLGMSQYEFSESIGIPCTTVNSIEGGKQKLS
                     VRVALAMKDNIVRQPDGKLRIVTKDTPPQYDEASLCMDWLVAGLGEPFDKTVGSNAGW
                     FNCDNNISLPTGENIEFYTMNDDSMYPLFLPNEHIAVDKNLNRVQSGHVYLINYAGIK
                     MLRKIYIVNKEKYNLVAINEKIILPQEVQTGEIEIIGEYIYKIAIANEMTNY"
     gene            10105..10332
                     /locus_tag="CPT85_08855"
     CDS             10105..10332
                     /locus_tag="CPT85_08855"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20887.1"
                     /translation="MIETDYSADRVLLAKALVISLKHIKQNSGCFCCKFSSSSQCTKD
                     LDYSLKCEYGMIDGIISNAKRELEKGLNNAI"
     gene            10487..11344
                     /locus_tag="CPT85_08860"
     CDS             10487..11344
                     /locus_tag="CPT85_08860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005883896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20891.1"
                     /translation="MNLISEKTFDQERALYNLKNAEVLNCKFQGPADGESVLKECKQI
                     SVSGCSFSLRYPLWHAKKFVLKDSFMDDKTRAPLWYSDNGVLDNCLINGVKCLRECKS
                     IEVKNCDISSPEFGWRCKGLGISDSKIDSVYFLFESKNVEINNLTMSGKYSFQYMKNL
                     HISNSNLDTKDAFWHSKNIVVENSIVKGEYLGWFSDNLTLINCKIIGTQPLCYCKNLK
                     LINCTMENTDLAFEYSDVEADIKGSIDSVKNPKSGKITADSIGNIVLEDSVMTCKANI
                     LVRQNEMIA"
     gene            complement(11349..12242)
                     /locus_tag="CPT85_08865"
     CDS             complement(11349..12242)
                     /locus_tag="CPT85_08865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013497466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="DAB20888.1"
                     /translation="MEIRVLKYFLTVAKECSITRAANVLHLTQPTLSRQLQDLEKELG
                     QKLFIRGSHNITLTPEGVILRKRAEEIIDMVEKTQAEFNAISEAVSGDIYIGGGETAS
                     MKYIAEVMMELQKEYPHIKFHMYSGNAEDVTEKLDKGLLDFGVLIQPINLSKYDYITM
                     PQKEIWGVIMRKDSPLAKKQKITLKDLTDKPLIASRQMSKKYSADSGFLDWFGNEFDN
                     LNITATYNLIYNASIMVKKGMGYAIALDKLINTDADSEICFKELTPKLTSGLDIAWKK
                     GQVFSPAAKLFLERLKEKFLV"
     gene            complement(12292..>12780)
                     /locus_tag="CPT85_08870"
     CDS             complement(12292..>12780)
                     /locus_tag="CPT85_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019002605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-carboxymuconolactone decarboxylase"
                     /protein_id="DAB20889.1"
                     /translation="GWPKAWAVFNLAKTVWAEDNTAATQKDKYANTIMFPIGEPNNAY
                     AKYFVGQSYLAPVSQEQVKIYNVTFEPKCRNNWHIHKAKSGGGQMLIGVGGRGYYQEW
                     GKEPVEIKEGTVIHIPAGVKHWHGAAPDSWFSHLAVEIDGVETSNEWLEPVSDKDYNK
                     LK"
BASE COUNT         3910 a         2183 c         2237 g         4397 t
ORIGIN      
        1 ctttgtttct ttgacagcct gcccgaagag ataacccata agagtattct catccgcatt
       61 attcagaatc tcttttccag tagtatcttt aagagaaaat gaaccgtcag agttttttgt
      121 cacagtcaat tcttgaaggt ttttctttaa gcctttggac aaaatacctc cggcaaacat
      181 catgccaaag ttcaagcctc cgttttgttt aagagattca ataaaggata agtcacttgt
      241 cattctgtca aacagtacat cagcagtggt ctctgtagtt gctgccatgg tctttgaaac
      301 gatattagaa aaaacagccg ggttttttga aagtactttt tccacagctt gccccaaggg
      361 cccagaagca taggcaccaa aacttccata aagcattccg tttttgaatt tttcctttat
      421 tgcatcaata ttttcgtcgg taaaaccagc ctcgcttgtt gccgcattaa gcgtttccag
      481 agtagcagga gcagctccca ttgtaaaagt cattgcggct ttaactcctt gagggccaag
      541 tttttgtgct gttgctttga cagcagaaga cccaggaaga agaagggatg ttgcaatggt
      601 taaccctatt tcagtatacg cagcttgtgt ttttgcgttt tcgacaaagt tttttgcggc
      661 tgtttttgcg tcttttcttc cgattacacg ctggcatgca gagttaaatt cgtttgtata
      721 taaggcgtag tcttttccgt ttaattcttt ttcatatgcg gttttcattt gagtttcaag
      781 gtttgaaata atgttgggat aatcttttac aatttcgtct ctgctggaat aatcagcatt
      841 gagcttttgc atatacgtat tgagaagctc cttatctccg ttgcaaaaat tgagcataat
      901 ctcgccgaat ttttgattgg aagaggtttt tggcggagtc aatgctgcaa gagccggacc
      961 tttaaggttt tttcgtgcct gattgtactc ttgttcttct ctaattatgt ttttgagctc
     1021 ttttaaacct tgagaaagct gttgatactt ttcatggtgc gcagttatgc gtgtatattc
     1081 ctctgcttta ttttttaggg cttctacgtt tttatggcta tatggcacgc cgtattttct
     1141 ttcaatcata gattcaaata cagcagggcg tttgttggca atgtctttaa gcttttttga
     1201 ttctttttgt tcttcactca accgattttg cagcgctata cggtcttctt gtcctgtcaa
     1261 aactttaaaa ccgttgactg cacggtcagt aatattggcc cagcctacat ttttgttata
     1321 atctgtgatt tcagtaagtc cggcagtgct ggaatcgtat aaaaaatcac caagaaatct
     1381 gtcgagttcc ttttgttgag tagatgtata aaccttttcg tttgaagagg aggaagaaaa
     1441 gtcagtgtct tggaaagcga taatctcagg gttgaacatt ttgatgtttt tgtcccaatt
     1501 gttatagtca agggataaaa aaacaccggt agatgtttta tcgaattctt tggaattaga
     1561 aaggattttt gtcaattctg cattagaaag cttctcgagc tcagcacgtt tttcttgctc
     1621 agcctgaccg tttaagccca tggccttaat tatttgatta actattatcg gatctgccat
     1681 ttttgccctg tttattccgc ttccaattgg tatatcggaa attcaggcaa aataatttaa
     1741 tatattggtg aaattgttac ataactttat aagttaatga caaaagctta cgtcgccgat
     1801 gtctgaacat tttgcattat aatcaccgta tccgcctttg acttttctta ctcttgtata
     1861 attcaatgtg ttatatctaa aaggcactgt attagcttga gtatagcttt gtgcagaata
     1921 agatgtgtct tttgatactc tctctttttt gttatttgcg taccaggctg atgaactgta
     1981 ggatgacgag ctgtacgatg atgttgattt gccggaagaa acatttgtca tttgtttcca
     2041 gtttccggaa tagttgccgc tttcgtcaaa catcgatgcg gcatttgctt gcatggtaaa
     2101 tgcacaaaat attaatgcag ttaataatag atttgttttc ataaagaaat tataacatat
     2161 ttcttacccg tcaaataaat accatcctcc atagcctacc acactagcat cgtcgtggtt
     2221 ttttgctgca ctgtttgcga gttttactct tttaagagaa taacctctgg atacagcgaa
     2281 ttctgtgagc gccattattg ctttactgcc gcaagcctga gaaggtagaa ggttttttat
     2341 atcaccgctt tcaattaatc ttgcagtgta ttcatcaagt ttttcggcaa tttctctggg
     2401 ataataatga ctgagatcag atgatacaat aaaagcgttt gtcttctcgt caaaataatt
     2461 ttctattatt ttttgcaata cacaatgttt gcgtacgtta tacactatgg gaattattct
     2521 cgcttctggc agaagttttt ggataaaagg aagcagaacc tcgattccgt attctttctc
     2581 aaaagctgcg ttatcaataa aaacttcggg gaagtttaaa agactgttat taagcaaact
     2641 atttacgctt atttgcccga gcggggttga aaattttagt gtattacaaa taacaatacc
     2701 cttaatctcc atataatgag caggtgcaag tataaaaatg tttttcaaat gcctgtctag
     2761 gtatttgaat gtatcagccg caagctggcc gcaataaaaa taaccagaat gcggtacaat
     2821 cagcccgcga gctttgacag ctgtctcaaa atgcgtgttg tgaagcattt tttctaattg
     2881 gttttcaagc tctaccgtgt ctttagggta aaatttgccg tcaaaatcag gatttttaat
     2941 tgttagcatt caatgctcct cacatatttt acaatgggat tataagccac attttatttt
     3001 gttataatag ccttacagac aattcagaaa gagggtttta atgttaaagc ttgagcctgt
     3061 tgagattcaa aattttaaag atgtatatga agatatgctt gaacagtttc ctgcatgtga
     3121 aatgaaagac tataacacct ttattaatct ttttgaacag gggcagtata aacttttgag
     3181 cgttgtagac gataatgtgc gcataggtta tttgctcctt tatgaatctt ctgtggaaaa
     3241 tgttttgtgg ctcgattaca ttgccgtgtt caggcaatac caatctaagg gatacggccg
     3301 tatgattttt gacagcttga taaatcaatt taatacttac aaaggtattt acctggaggt
     3361 cgaaaaagcg gatgaatctg ttattaatac aatcaggaga ataaagtttt ataaatcact
     3421 tggtgcaaaa aaactggata taaattattt ttatcctaac aaggacgggt gtattgaatt
     3481 ggatttatat tttcttccgt tttgcaaagc agaattgcct ttaaaagaag tctcttttcg
     3541 ggtaattaaa gacgtattca atgccttgca caaggaattg aggcatattg ataacgtata
     3601 ttgcaagata acaggacaat actagtaagt tgttttgctt tgtgattttt cttctttaaa
     3661 tacgcgaggt accgtaaaac cgaatataca tgtttggttt tcaaaacttt gtgctctcat
     3721 ttgaccgtta tgttttgtga taatcttttt agaaagataa aggccaagtc ctgtactggc
     3781 tttttcaaat tttgcattta catttgtttt aaacttttca aatatttcag ccagtttttc
     3841 ctgtggaata aaatggctgt tgtttgtcac gtcaaatgat acgttttcat caacttcttt
     3901 taaactgata acaatattgg tattttcaaa accataagta atagcgttgg caataaggtt
     3961 gatcattgct cttttaagct gtaatttatc tgctgttacc atattatctt ttaaagaaga
     4021 ttctaaaacc agattttggt tttttgtata tgcaagcata gaaagttctt gtatagttgt
     4081 tttaacaaga tcttcgtagt caaatgtttg tggctcaagg ataattgatt ggatttctga
     4141 cttgtatgct gcaatcaatg ttgatatcat atttttcata taaacgttag agtttttaga
     4201 atgttgtata atctctcttt ggtcgtcatt cagcttgccc agcgtttctt taagaagaat
     4261 atccatagct gttatttgtg cgttagtggg tgtttttaaa tcgtgcgtaa ttgtcgacat
     4321 caaaattctt tcttgttctt ctcttctttt ttcactgtcg atatttttaa caattacaat
     4381 aatacctata atgtcattat ttatatcaag gattggtgac tttgttactt cataccaaac
     4441 aggtgtattt gtgtaggtac tgctttgtac ttcgatgata agtgcctgct tggtttttat
     4501 gacttgttca tcttcttgtt ttattttttc agcattgttc tccacatata tgtttgttga
     4561 aggcaagcct atcagttttt ctcttgagat acctatgttt ttttctaccc ggctgttgca
     4621 ggttattacc ctgccttcca aatctttcat ataaagcata aatggaatgt tatccaaaat
     4681 actgttcaac tgtgcgtttt gaattagtat tctttctttt agctgttcca ccgtggttac
     4741 gtcacgcaaa ataccaagca cacctgatat ttcatctttt ttaacaattg gagcaagcag
     4801 actgtcatag atttttgttt ctccattaaa catttgtttt tcgattttat atgacactat
     4861 tcctgcatta tcaataactt ttttgtcata agaacgtatt gtatctgctg tttctttgga
     4921 ataaaaatca aagtcagttt tttttgcaat gctgctttca ttgtctatgc atagcatttt
     4981 tttcataaca ggattgcaat caatatatcg caaatcgctg tctttcatat aaattaaatc
     5041 agggcaattc ataaaaatag aattcagcag atctgatcgg tttttatatt taactgaaag
     5101 ttttttgtat aaatgtcttt tttcaacaag agagtgaata agaaacacaa acaatattat
     5161 caggcagccg tattttactg ataaatgaat ctctggctct ataacagtcc aacagataaa
     5221 aagggcaaat aatacataaa acaaaatttg cctgtatatt tttttcctaa tcaaaataaa
     5281 ctcctaatct acaattcttg ttcttattgc ttttnnnnnn nnnnnnnnnn nnnnnnnnnn
     5341 nnnnatttcc cacatgagct tttgctgtgt gcatgcttat aaacatttct tctgctattt
     5401 cagtattgga tttgccgtca actatgtatt ttaagacctc acgttctctt tctgtaagtg
     5461 aatttattac ttttttatcc ttatatagat tttttaaatc tgtagaacac ggttttggcg
     5521 caaaatcttt tgcaacgtat gcaatttttg aatcaagcca caaatctccg tttgctacat
     5581 ccataatcac tgaatttagt tttgatgaat ctatatcctt aaggcaataa gcacttgctc
     5641 catagaataa tgctgccatt acttcttcgc tttcatcgtg cgaggtgaga atcaccactt
     5701 ttgtttccgg atgttgttct ttgattattt ttgttgccgc aactccgttc atacctgtta
     5761 aacccagatc cataaggaca acatcggatg ggtgtttgct aaacacttct aaaaaagttt
     5821 ctgcgttctc aaaatcacct aaaacctcaa aattaggctc ctttgtcagg atgtgtatta
     5881 aagattttcg gattaacagg tagtcttcga ctacataaat agaaattttc ttgtcaattg
     5941 ccaacttgaa ctaactcctt ttctttaata ttaagacctt agataaaact actatagtaa
     6001 ttctcggtgc taaaatatat cacccagttg tctatatttt taaaaatcgg gatgataaca
     6061 gtgtactgac aacacttatt attctttttt aaacttatta atgtattaca aagttgtaat
     6121 aaaaatcaag tttaagggct attgacacat cttaaaagat tattatactt ggtatatgtt
     6181 atttggttaa gaatcattac acataaatcc aaaaactgtg taaaacttga aaaaggagac
     6241 aaaaatgaaa aaaacattgt taactacact tatggcggnn cattgtctgc attatttagt
     6301 gttccggcta tggcagcttg ccctgtaaaa gctcaaacac catgtgcaaa aaaatgtgac
     6361 aaacctgcac ctcctatgga atgcaaaaaa ccgatgagtc ctgaagaacg cgctaaaatg
     6421 agagaagcaa gaaaagctga ttttgaagca agacttcaac ttaccgagtc acaaaaagca
     6481 caacttgaaa aaattaaagc agatgaaaag aaagctctag ctccttacaa agaaaaaata
     6541 gccaaagaac gtgcaaaaat gaacgaactc tttgaaaaag aaagagcaat aagaacagaa
     6601 agcatgaaga aatttgaagc tacattgaca gcagatcaaa aagctgagct tgaaaaaatc
     6661 aaagaagaaa tgaaagcaga aatggaacaa atggggccaa gaggacctca tcatcctaaa
     6721 ttcggtccaa aaccggtatg ccctccggat tgtggatgca gctgccatga cgcaaaagca
     6781 aaagaaccag ctgattgcaa ctgtccttgt cacaaagctc ctgctaaaaa ataataaaat
     6841 attataaaag ttaaagtggt aaatctttta aaggtttacc actttttaaa tataaaaaat
     6901 actgccagca ctataaataa aaagccgaca atgtaattcc acttcaattc ttcttttaaa
     6961 taaaatacag agaataaaca aaacacaann ttttaggtgt gctgcatcat aataaccgta
     7021 gccgattctg tttgcaggaa cctgaaaaca atactcaaaa aatgcaatgc cccagcttat
     7081 taaaataaca agccataacg tagcattttt atatttcaaa tgaccgtacc atgcaaatgt
     7141 cataaataca ttggagatag tcaataaaat tatcggcgta agttgtctga acataaaata
     7201 ataatagcaa aaaatcaaaa aatgaattat actgagttta aaattttgtg tgaaaaaatt
     7261 gtgataagga gttcggctta tgaaagatat aagagaaatc aaagactatc aaattgtgtt
     7321 gcttggtatc attattgcca ttggtgctat tgtttcaaca nnnnnnnnnn nnnnnnnnnc
     7381 aaaatcaagc attgagtgta acgggctctg cttccaaaga gataaaatca gatattgcag
     7441 tatggaaagc ttattatgaa gtaagaagca aagatttgaa atcaggttat acaaaaatca
     7501 atgctgataa agctgcggta aaagattttc ttgttgcaaa cggtatgaaa gaagaggata
     7561 ttaaatttac tcctgtttct tcttatccgg tttataaaaa actttcaaac ggctatgatt
     7621 caaatgatgt ggacggctac agactctctc aaaacgttca ggtctccaat tccgatgttg
     7681 ataaggttac aaagatttcc caggatgttg taaaacttgt ggataaaaac gttgaaatca
     7741 cttccaatac agtagattac tttgtttcga accttgatca attaaaaatt gaaatgctgg
     7801 cacaggcaac aaaagatgca aaacaaagag ccgaaagcat ggtgaaaagc acaggctctc
     7861 acataggtgt tatgaattct gctaaaatgg gtgttttcca gattgtggca aaagattcta
     7921 ctgatgtttc cgactatggc atatataata caactgcaag agataaaaaa atcaatgctg
     7981 ttgttaatgc aacttttaca ataaaataaa gctatgaata aggtaaaaaa tgtcattatc
     8041 tgcgggcttg gtgcaatcgg gacaatatat gcagcccgta ttgctgatgc cggcaatata
     8101 aatcttaaga ttttactcga tgaagagaga atcgaaaaat ataaaacaaa tcctactgta
     8161 tttaataata aggaatactc ctttgactat ataacaggag attattgcgg ctttaatgca
     8221 gacctgataa ttattgccac aaaaaatagt ggacttatgg aggctgttga cgctgttaag
     8281 aactttgtaa atgagaatac cgtttttatt tctcttttga acggtatatc aagtgaagat
     8341 gtgatttcgt ctgtttatgg atttgataag gtgctttatt cctattacat cggacatacc
     8401 agtacaagac aaggccgcag tattgtgcat gatggagttt ataagacggt ttttggtgaa
     8461 aaggacaatc aacagctttc taaaaatgta ttaaaaatta aggagttttt tgattcaaca
     8521 ggcataccgt atgaaatacc tgttgatatg gattattcaa ggtggtggaa atttcttgtt
     8581 aatgtaggtt acaatcaggc ttctgccgtg ttaaatgcct cttatggtgt ttttcaaaat
     8641 agtgaaagag caaacaatct tgcaattaac cttatgcaag aagctgcaga tttggcaaaa
     8701 gctatggggg tgaaaaacac acatcagctt attgctcagg tacttgatgt tatcaagaca
     8761 atgttgcctg aaacacgtac ctctatgctg caggatatag atgccaaaag acagactgaa
     8821 gttggtattt ttgccggcta tattgtagaa tcggcaaaaa aatattcaat acctgttcct
     8881 tataacaaag ttgtattaga cattattagt gcaattgatg aaaaaaacgc cttataaagc
     8941 ttaatgtttt ttaatttcca tttgaccggt gcttttatcc agtgttatat caacattgtg
     9001 gagcttttcc agggtacctc ttgtcataaa atgtgtgtga tagattttct tcttcaattt
     9061 ataataaata cagcaaaaac cagctacatt tattgttata tttattgcaa taaccagact
     9121 gaaacctata atcagatatt tttttaataa gggttttagt atatctgcac attcgaatgc
     9181 tttttctccc atcgatcctc cataataaaa tttacaatta tcacttttaa cataagtatt
     9241 atgctaaaat caatagtttg tcatttcgtt ggcgatggct attttgtata tgtactcccc
     9301 tataatctct atttcacctg tctgtacttc ttgaggcaag attatttttt cgttgattgc
     9361 aactaaatta tatttttctt tattaacaat ataaattttt cgtaacatct taatgccagc
     9421 ataatttatt agataaacat gcccgctttg tactctattt aaatttttat ccacagcaat
     9481 atgttcgttt ggcaagaaca aaggatacat agaatcgtca ttcattgtat aaaattcaat
     9541 attttcgcct gttggcagtg aaatattatt atcacaatta aaccatcctg catttgagcc
     9601 cactgttttg tcaaaaggct cgcctagtcc ggcaacaagc caatccatgc acaaagaagc
     9661 ttcatcatat tgtggaggtg tgtcttttgt tactattctc aatttaccgt caggctgtct
     9721 gacaatatta tctttcattg caagcgcaac acgtacagag agtttttgtt ttccaccttc
     9781 aatactgttg acagtagtac aggggatgcc aatactctct gaaaattcat actgagacat
     9841 gcccaatgat tttcttattt gttttattct gtctttgcct tgtgacatcg taatttatta
     9901 gaaccgcaat ttctaaatgt atatccgttt taaagcctta aggaaaaaat ccttgacaat
     9961 aaggagaaaa tcctctatta tcatataagc taatatatgt gtttagttta acataaaatt
    10021 tgattatgtt aattaaccac ctttctagaa atttcatttc tagaaaatag tgctggatca
    10081 aattattaac agaaggatat aaccatgatt gaaacggatt attcagccga tagagtactg
    10141 ttggctaaag ctctggtaat ttctcttaaa catataaagc aaaatagcgg ttgtttttgt
    10201 tgtaaatttt cttcttcttc acaatgcaca aaagatttgg actattcact aaagtgtgaa
    10261 tatggaatga tagacggcat tatatccaat gcaaaacgag agctggaaaa aggcttgaat
    10321 aacgctattt aatcgaaagt ttttgatatc tcgcagacaa tatacaaaat atgtgtgata
    10381 tgccttgcgg gtatagtgtg taatccaata taagtatttg ttatttttaa aaaatagtaa
    10441 ataataaaaa taaaggttca aatcttatat actggagcat tacatgataa atcttatatc
    10501 cgaaaaaact tttgaccaag aacgcgcttt gtacaatcta aagaatgcag aagtgttgaa
    10561 ctgtaaattc caaggccccg cagatggcga gtctgttttg aaagagtgca agcaaatttc
    10621 tgtatcaggt tgttcatttt ctttgcgtta ccctctttgg catgcaaaaa agtttgtact
    10681 caaagattct tttatggatg acaaaaccag agctcctctg tggtattctg ataatggagt
    10741 tttggacaac tgcctcatta acggtgttaa atgccttaga gaatgtaaaa gtattgaagt
    10801 aaagaattgt gatatatcct cgcccgaatt tggctggaga tgtaaggggc ttggcatcag
    10861 cgattcgaaa atagattctg tttatttcct ttttgaatcc aaaaatgttg aaataaataa
    10921 cctgacaatg agcggcaaat attcttttca atatatgaaa aacctgcata tatcaaactc
    10981 aaaccttgat acaaaagatg ctttctggca cagtaaaaat attgttgttg aaaattcgat
    11041 tgtaaaaggc gagtatcttg gatggttttc agataatctt accttgatta actgtaaaat
    11101 tatcggtaca caacctttgt gttattgcaa aaatttaaaa cttattaatt gcacaatgga
    11161 aaatacagac ttggcttttg aatattctga tgttgaggct gatattaagg gaagtattga
    11221 ttctgtaaaa aatccaaaat caggcaaaat aacagctgac agtattggaa atattgtatt
    11281 agaagactct gtcatgactt gtaaggcaaa tattttggta aggcagaatg aaatgattgc
    11341 ataagttatt aaacgagaaa tttttctttt aatctttcca aaaataactt tgcagcaggt
    11401 gaaaagactt gtcctttttt ccatgcaata tcaagccctg atgttagttt aggggttagc
    11461 tctttaaagc agatttcact gtcagcgtca gtgtttatga gcttatccag tgcaatggca
    11521 taacccatcc cttttttcac cattatcgat gcattataaa tgaggttgta tgtggcagtt
    11581 atgtttagat tatcaaattc attcccaaac cagtctaaaa agccgctatc tgccgaatat
    11641 ttttttgaca tttgtcgtga tgcaatcagg ggtttgtctg tcaaatcttt tagggtaatc
    11701 ttttgctttt tagccagagg gctgtctttt ctcattatta cgccccatat ttctttttgc
    11761 ggcattgtaa tgtaatcata ttttgaaaga ttaatcggct gaatcaacac cccgaaatca
    11821 agaagccctt tatccagctt ttctgttaca tcttctgcat ttccgctgta catatgaaat
    11881 tttatatggg gatattcttt ttgcagctcc atcatgactt cagcaatgta tttcattgag
    11941 gctgtttctc cacctccgat ataaatatcc ccgctgacag cttcacttat tgcattaaat
    12001 tcagcctgtg ttttttctac catatcgata atttcttctg ctcttttgcg aaggatgact
    12061 ccctcgggtg tgagtgtgat attgtggctg cctcttataa aaagtttttg ccctaattct
    12121 ttttccaaat cttgcaattg tctggataat gtaggctgtg ttaaatgcaa aacattggca
    12181 gctcgtgtta tagagcattc cttagctaca gtcaaaaaat attttaaaac tcttatttcc
    12241 atacgtgtat aataatattt gcccgtgata gcgttaagca aaccgtctgc gttattttaa
    12301 cttgttgtaa tctttatcgc taactggttc taaccattcg tttgatgttt ccaccccgtc
    12361 aatttcaaca gctaaatggg agaaccagga atccggtgct gcaccgtgcc aatgttttac
    12421 acctgcagga atgtgaataa cggttccttc ttttatttca acaggttctt taccccattc
    12481 ctgatagtat cctcggcctc ctacgccgat taacatctga ccgccgcctg atttagcttt
    12541 gtgtatatgc caattatttc tgcatttggg ttcaaatgtt acgttataga tttttacttg
    12601 ttcttgtgaa acaggagcca aatagctttg accgacaaaa tattttgcat aagcattgtt
    12661 aggctcaccg attgggaaca ttattgtatt tgcgtattta tctttttgtg ttgcagcagt
    12721 gttatcttcg gcccatacag ttttggctaa attaaataca gcccatgctt ttggccatcc
//
LOCUS       DABS01000194            3630 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_26926, whole genome shotgun sequence.
ACCESSION   DABS01000194 DABS01000000
VERSION     DABS01000194.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3630)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3630)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3630
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            3..164
                     /locus_tag="CPT85_08875"
                     /pseudo
     CDS             3..164
                     /locus_tag="CPT85_08875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014312828.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing start and stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxylamine reductase"
     assembly_gap    165..200
                     /estimated_length=36
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            265..423
                     /locus_tag="CPT85_08880"
     CDS             265..423
                     /locus_tag="CPT85_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004005141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20856.1"
                     /translation="MHELKIKRIYEKPSFDDGKRILVDRLWPRGVSKTQAHLDDWYKD
                     IAPXXXMV"
     gene            380..613
                     /locus_tag="CPT85_08885"
     CDS             380..613
                     /locus_tag="CPT85_08885"
                     /inference="COORDINATES: protein motif:HMM:PF04343.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20857.1"
                     /translation="MTGTKISLQXXEWFNHEADKFKEFSIHYKEELKGNDFVQKIKQL
                     LKKYNVTLLYAAKDSKINHAVVLKDYILNTKNI"
     assembly_gap    407..412
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(615..908)
                     /locus_tag="CPT85_08890"
                     /pseudo
     CDS             complement(615..908)
                     /locus_tag="CPT85_08890"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(835..1569)
                     /locus_tag="CPT85_08895"
                     /pseudo
     CDS             complement(835..1569)
                     /locus_tag="CPT85_08895"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    896..904
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1622..2356
                     /locus_tag="CPT85_08900"
     CDS             1622..2356
                     /locus_tag="CPT85_08900"
                     /inference="COORDINATES: protein motif:HMM:TIGR01528"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20858.1"
                     /translation="MTYIIKSKLQSTLILSIKEFVKAELNGWKRAEVIGLCIVFTIIF
                     VNAIVVKDSIIAVISAVCGILYSTIAGKGKVSCYIFGLTGTCCYSWLAFDNGLWGNLA
                     LYMCYYFPMQIIGIFAWRKHLKKETAEIIKKQLTFYERLKLSLAALLACICAIVLLYY
                     FKDSSPVFDGITTVLSVFGMYLTVKRCIEQWIIWMVVNGLSSLMWLNLVIHGAKTYAT
                     FIMWVVYFILAVYFYFCWEKEIGERN"
     gene            complement(2408..3154)
                     /locus_tag="CPT85_08905"
     CDS             complement(2408..3154)
                     /locus_tag="CPT85_08905"
                     /inference="COORDINATES: protein motif:HMM:PF04402.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20859.1"
                     /translation="MKKILSAALVGALAIGFISAGGLKAAADVIERGFVSVSTTANTE
                     LPPDVVEISIAVQTQDTKSLQKATAENKLISDKVYSSLSAMINKDNGDFIKTTNFNAA
                     PVYNYKNNKKDLVRYEVSNSIIVHTKSIKDTGAMIDKAISLGATNIDNINFSVSSYDK
                     QCDQLLGIAAKKAFTRAGILAKSANNTLAGIKSMNGSCSTSSNIPQYRLLAKNMAMSA
                     SADSSLESSSPIQGGVIKLYANLNASYFVK"
     gene            complement(3263..>3630)
                     /locus_tag="CPT85_08910"
     CDS             complement(3263..>3630)
                     /locus_tag="CPT85_08910"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20860.1"
                     /translation="AKAASKYSQEFIQNFYLCRAFSESKYNVAYNSNSTYEIKGYAPD
                     GSGKCVYVETNRWQRGANVTTCYFNQKQIQEYYTAMINPDIKGSVLVKGMPVVGKNEE
                     VVFLQYFNNPEVCITKTIR"
BASE COUNT         1060 a          547 c          673 g         1299 t
ORIGIN      
        1 cattatcact agtattgtcc tggtatgaac aaaaagctgt ttgtatttta cttacactcc
       61 tttatctcgg tatagaaaat atcagactcg gaccgaccct tcccgcattt gtatcctcta
      121 atgttttaaa tattctggtt gaaaaattca aaataaaacc tgttnnnnnn nnnnnnnnnn
      181 nnnnnnnnnn nnnnnnnnnn cgggcaatat cattcatttt acagggcagt taaaaaaata
      241 gctgtcctgt tttatattga ttttatgcac gaattaaaaa taaaacgaat atatgaaaaa
      301 ccctcctttg atgacggaaa gaggatactt gtagacagat tatggccaag aggtgtttca
      361 aagacccagg ctcatctgga tgactggtac aaagatatcg ctccaannnn nngaatggtt
      421 taaccatgag gctgataaat tcaaggaatt ttctatacat tataaagaag aacttaaagg
      481 aaatgatttt gtacaaaaga ttaaacaact tttaaaaaaa tataatgtta ctctgcttta
      541 tgcagcaaaa gattccaaaa tcaatcatgc tgttgtttta aaagattata ttttaaacac
      601 taaaaatatc tgaattactt taacagacgc ggtttttcaa gttttccttt aatctctgtt
      661 ctgtctgcca gaaaagtaga tataacagga ataaacatat aatatattgc acctagaatt
      721 aacaccggtt ttgcaatttt tatgccttca atatactttt ccaattccgg caggtttttg
      781 tttatagccc gaaatttatt tataaatttt tcagtagact tatttgttgc actgttaact
      841 gcatagcctc cagttaagca gagtcctgtt gaaataatcg aattgtaaat taacgnnnnn
      901 nnnntcaatt tttttgtttt ttgctgtctg ttggacaaaa gacaatgtaa gcacaatatc
      961 agtaagcgat gttatatgct gggcataatt cgtatcataa tatttttttg caaagttctg
     1021 aaacagtttt ttatcaatta tttttccgat tcctttagca agcttttctg aaactttatt
     1081 gtagattcct ttgaaagaaa ttaccttgga ttttttaata ctgtcagatt cttgtttttg
     1141 agatttttgt ccgggaaaaa caccggcaat aaacggaatc attacgcagg tcagtgctga
     1201 tttgggagcg gctattataa gtccaactcc aagtttaaaa atttgtgacg caaatgaata
     1261 aatttttgat tgattcaaaa attttgaact gccttgcagg tttttaattg tttctttttt
     1321 tagatatttt aaagggtttt tatcgatttt ttctattgct tttgagaccg gcagagaaga
     1381 tgcaagcata attaagtagc ctacaatgct ggaagaaagt gattttgcac aggcaatttt
     1441 tttgttttcc ctgtctgttt taggtgttga cataatagca ataggtcttg ctgcagttga
     1501 tagaaaaaga gatgcagttg cactaaaaag tgtgccgttt ttggcggcaa atttcaaact
     1561 ttttaacaaa agtttattag tgtatatccc gttaaaattt actttcattt atttttatta
     1621 gataacatac ataataaaaa gtaaattgca gagtacatta atattgagca taaaagaatt
     1681 tgtaaaagct gaattaaatg gttggaaaag ggctgaagta atcggtcttt gtatagtttt
     1741 tacaataatt tttgtaaatg cgattgttgt aaaagatagc attattgcag tgatttcagc
     1801 tgtatgtgga attttatatt caactattgc aggcaaagga aaggtttctt gttatatttt
     1861 tgggctaaca ggcacctgtt gttacagctg gcttgcattt gataacgggc tttggggaaa
     1921 tcttgctttg tatatgtgtt attactttcc catgcaaata ataggtattt ttgcatggag
     1981 aaaacatctg aaaaaagaaa ccgcagagat tattaaaaag cagctaactt tttatgaacg
     2041 attaaaattg tctttggcag cccttttggc gtgtatttgt gccattgtgc tgttatatta
     2101 cttcaaagat tccagccctg tatttgatgg tatcactacg gtattgtctg tttttgggat
     2161 gtatttgaca gtaaaaagat gcattgagca atggataatc tggatggtcg tcaacggttt
     2221 gtcgtctttg atgtggctga atcttgttat acacggtgcc aaaacttacg ccaccttcat
     2281 catgtgggtt gtatatttta ttcttgctgt ttatttttat ttttgctggg aaaaagaaat
     2341 cggtgaaaga aactaatctg tcaccgattg ggttttaatg cgttcggaat ttaaatgaga
     2401 taagtgttta tttaacaaag taagaagcat ttaaatttgc atacagcttg ataacaccgc
     2461 cttggatagg gcttgagctt tccaaggaag aatctgcgga tgcactcatt gccatatttt
     2521 tagcaaggag tctgtattga ggtatattgc tggatgtaga gcagctgccg ttcattgatt
     2581 taattcctgc aagagtgttg ttggctgatt ttgcaagaat acctgctctt gtaaaagctt
     2641 ttttagcagc tatgccaagc agctggtcgc attgtttgtc ataagatgat acggaaaagt
     2701 ttatattatc tatatttgtt gcgcccagag atattgcttt gtctatcatt gctcctgtgt
     2761 cttttatgga ttttgtgtga acaataatgc tgtttgacac ttcatatctg acaaggtctt
     2821 ttttgttatt tttgtaatta taaacgggcg ctgcgttgaa attagttgtt ttgataaaat
     2881 ctccgttgtc tttgtttatc attgcgctca aagatgagta aactttgtct gatattaatt
     2941 tgttttcggc agtagctttt tgcaaggatt ttgtgtcttg ggtttgcaca gcgatgctta
     3001 tttccacaac atcaggcgga agttctgtgt tggcagtggt tgaaactgaa acaaaacctc
     3061 tttctatcac atcagcagcg gctttcaatc cgccggcact tataaaacct attgccagag
     3121 caccaaccag tgctgcagat aaaattttct tcataatctc tccttttttg tgtactcata
     3181 aatcataaac gattatttaa aaattttgtt caaatttaaa attattggga aattgttgta
     3241 taaattattg ggtacaaaaa agttagcgaa tggtctttgt gatgcagact tcggggttgt
     3301 taaagtattg taaaaataca acttcttcgt ttttgcctac aacaggcatg cctttaacca
     3361 gcacggaacc ttttatgtca gggtttatca ttgctgtgta atattcttgt atctgttttt
     3421 gattgaaata gcaagtggtg acattggcgc ctcgctgcca gcggtttgtt tcaacataaa
     3481 cacactttcc gctgccgtca ggggcataac cttttatttc gtatgtagaa tttgagttgt
     3541 atgcaacatt atattttgat tctgaaaaag ctctgcacaa ataaaaattt tggataaatt
     3601 cctgtgaata ttttgaggct gcttttgcct
//
LOCUS       DABS01000195            8862 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_4470, whole genome shotgun sequence.
ACCESSION   DABS01000195 DABS01000000
VERSION     DABS01000195.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8862)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8862)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8862
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..780
                     /locus_tag="CPT85_08915"
     CDS             <1..780
                     /locus_tag="CPT85_08915"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20833.1"
                     /translation="AFMPLTNSVVNKIQKIGQLSQDKVDILHNAAETALCNTGLKEKG
                     AKIVYLKREAGEIPPPKILRNLSPLEQVKDGKNAFYAFKDAINPLTKEVMFSKNTIMM
                     PEKDLSYIAFHEIGHGLNHNFSKLGRFLQKMRNPMMAIAGNIALFCAFTKNAKQEEGK
                     DLTTGQKVKNFVRNNAGKLSFAAVLPILFEEGMATYKGQKLADKLLTKDMAKIVSKGT
                     KVAYLTYIIGALSIATTSFATVKIKDYLVAKKENKSDNKVV"
     gene            777..1241
                     /locus_tag="CPT85_08920"
     CDS             777..1241
                     /locus_tag="CPT85_08920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005382882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="DAB20834.1"
                     /translation="MKITTKLNIVLYEPEIPQNTGNIVRFAACTNSDVFLVGKLGFSI
                     DSRHLKRAGLDYWGDVNIRRIEKIEDLWQEFPDNDFYYLTTKTQNYYTDVKYKDGDFL
                     VFGPESRGIPEELLFSKGKHSITIPMQDGQRSLNLSNSVAIVVYEALRQING"
     gene            1247..2131
                     /locus_tag="CPT85_08925"
     CDS             1247..2131
                     /locus_tag="CPT85_08925"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="DAB20835.1"
                     /translation="MEYTEITAQSVKALMPQRPQQSNKGTFGKVLNIAGSIEYQGAAY
                     LSSVAPLKTGAGLVTLATIEPLINNLAGNCPWVTFYPLRDYYKKCIASDAFGDVLNII
                     ENYNVLSVGPGLSDTAATNAFVDDLIKYLNKNNKKTVIDADAINVLSKSELSSFPSDS
                     VITPHPVELSRLINTPVKDIQNDRIKYAKLTAEKFGCCVVLKGNQTVVCTKDLEVFVN
                     TSGNSALAKAGSGDVLTGIISGLMAQAVSVENAAKLGVYLHGLCGELASQDLSLYSVL
                     ATDQIDYIPQAIKKILEA"
     gene            2133..2834
                     /locus_tag="CPT85_08930"
     CDS             2133..2834
                     /locus_tag="CPT85_08930"
                     /inference="COORDINATES: protein motif:HMM:PF03099.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20836.1"
                     /translation="MKAFFIPYSVNNGRFNMDFDEKLLDFAIKTNLSMPIFRLYGWSP
                     ACVSLGRNQSDSHIDKNFCVANNIDIVKRLTGGRALLHDNELTYSFVCPVSFLKNGQT
                     VIQSYKEISGALSEGLKKAGIDAVFPQDKQAKTNYEYCMSLSTGADLSYKGRKIVGSA
                     QFRKQGYILQHGSIMFDYDKDVIKNIFGETPASENITTIKESAPQLKLEELCDSLKNG
                     IEDYFCLSFVPFDSF"
     gene            complement(2831..4738)
                     /locus_tag="CPT85_08935"
     CDS             complement(2831..4738)
                     /locus_tag="CPT85_08935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013655748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4914 domain-containing protein"
                     /protein_id="DAB20837.1"
                     /translation="MENLLTSNKVWQHWHISDELKQLLDKSSNVILPEKRDELIELST
                     NGKENLTYKVVYNVEGKGEVTEAEVIRCKNGIAVNYTEAYMRRRDPNCMVVNNIEMTD
                     KVTFQERFNKEFEPLRKETFDWLSDNEIIIVPFMAGGTEYGYPALMVAPKNAAFFAAS
                     IYDLQGMIPTDKLERDFEPKAIIYVAPPFRHSHFEGKQVVVHNQQNSVHEVFSYNLYP
                     GPSAKKGVYGVLLALGLKEDFVTVHASTVNITTPYDNDISILHEGASGSGKSEMLEYA
                     HREEDGRLLLGRNVVTGEEKYLALQQGCKLQPVTDDMALCHHSFRRDNGRLCVADAER
                     SWFVRIDHIKKYGTDPNLENVTTNPKEPLIFFNLEAHPNATCLIWEHVEDSPGKKCPN
                     PRIIIPREQIKNIQDGPIEIDYRSFGLRTPPCTKENPSYGIFGMLHILPPALAWLWRL
                     VAPRGFGNPSITSTGKDAFKLESEGVGSFWPFATGKRVDLANILLEQFMNTTKTRNIL
                     IPNQHIGAWEVGFMAEWVIREYLARRGQASFRKLNLKPSRHPLGGYIPENIHVEGTPI
                     SKKFFDVTKQPQIEEEGYDKGAKMLEDFFKEELKLYLKSDLHPLGKAIILCCMDNGTV
                     DDYEKLIPGTY"
     gene            4912..6669
                     /locus_tag="CPT85_08940"
     CDS             4912..6669
                     /locus_tag="CPT85_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003372988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="DAB20838.1"
                     /translation="MTVLDKVNYPNDIKKLSIAELDTLADEMRQLIIKKVNTTGGHMG
                     PNLGFVEPTIAMHYVFDTPKDKIVYDVSHQCYPHKILTGRKEGFTNPQRYLDFSGYTN
                     PEESEYDCFVVGHTSTSVSLAAGLAKSRDLKGDKENVIAVLGDGSLSGGEALEGLNNA
                     AVLGSNIIIVFNDNEMSIAPNHGGMYENIRLLRETNGQAECNFFKAMGFDYYYVEEGN
                     NTQKLIEVFEKVKGLNHPVLVHIHTLKGKGLLPAEQNKEAFHWIMPGTLDKKDDDTNS
                     TPTENYTSVTVDYILNKAKQDPTVFAISPATPGAYGFTPDVRAQLGNQYTDVGIAEEH
                     AVAFASAMAKNGTKPILLILSSFIQRTYDQLSQDLCLNNSPATILVHWGAITGADMTH
                     LGCFDIPLVSNIPNIVYLAPTNKEEYIAMMDWSLQQTQHPVAIRVPFGNFVTTGIEDK
                     TDYSILNKYSVVKEGAEIAILGLGSFFEKAEDLAKEIHKALGINATVINPKFITGVDE
                     QLLDSLKQNHRLVVTLEDGVLGGGFGEKIARYYGPSEMKVLNFGARKEFTDRVPLEEI
                     YERNHLTTDLMIQDIKSVL"
     gene            complement(6712..7170)
                     /locus_tag="CPT85_08945"
     CDS             complement(6712..7170)
                     /locus_tag="CPT85_08945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012514447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="DAB20839.1"
                     /translation="MNIKNLDITLKGINENGEEQEYRISDFTGQETILYFYPKDNTSG
                     CTQEACDFKENKNRWSAHAQVIGVSPDSIKSHIKFKENHSLNFILLSDPEHALSEAFG
                     AWGEKSMYGRKYMGIIRSTFLINNQGEVTKEWRKVKVKGHVDEVIEELNK"
     gene            complement(7170..8192)
                     /locus_tag="CPT85_08950"
     CDS             complement(7170..8192)
                     /locus_tag="CPT85_08950"
                     /inference="COORDINATES: protein motif:HMM:PF01075.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20840.1"
                     /translation="MKNLNGKTIAVISLGWLGDTIINEMLCCNIKKLYPDSRLVLIVS
                     KTFEDLGKIMTCDKCYSYDKSNEHKGVTGLFKLVKQIKKQEKIHTAILTHTHERTVLF
                     AKLLSPKAIASLYLKNYNPLNLFINKHYKIDEKEFFSTYRGNFNANMLRLLCNNYEID
                     YKTNIQIPHEEDLKTTEKFKDIIPFEKDYIAISTTSKQEANDWDINEIVNFTSRCELP
                     VVFIGTGRAHDIAQKIKSYNLPNFIDITNKTTIMDTAVILSKANCVISVDTGTMHMAY
                     LLNKPTICLFHQPIMIPQWYPAYLDNVKILVGHKYLDEKTKKIIKLKEIQSTDVLNLV
                     NQLRSK"
     gene            complement(8270..8862)
                     /locus_tag="CPT85_08955"
                     /pseudo
     CDS             complement(8270..8862)
                     /locus_tag="CPT85_08955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016277491.1"
                     /note="frameshifted; too many ambiguous residues; internal
                     stop; incomplete; missing start; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="arginase"
     assembly_gap    8571..8607
                     /estimated_length=37
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         2698 a         1537 c         1645 g         2945 t
ORIGIN      
        1 gcttttatgc ctttaacaaa cagcgtcgta aataaaatac aaaaaatcgg tcaactttct
       61 caagataaag ttgatatatt acacaatgca gcagagacag cattgtgtaa tactggtctg
      121 aaagaaaaag gtgctaaaat tgtttattta aaacgagaag ccggtgaaat accgccgccg
      181 aagattttaa gaaatctaag tcctttagaa caagtaaaag acggcaaaaa tgcattttat
      241 gcgtttaaag atgcaataaa tcccctgacc aaggaggtta tgtttagcaa aaatacaatt
      301 atgatgccag agaaagatct ttcctatatt gcttttcatg aaataggaca cggcttgaac
      361 cataattttt ctaaattagg cagatttctt caaaaaatga gaaatccaat gatggcaatt
      421 gcaggaaata ttgccttgtt ttgtgctttt acaaaaaatg ctaaacaaga agaaggcaaa
      481 gatcttacaa cagggcaaaa agttaaaaac tttgtaagaa acaatgccgg caaattgtct
      541 tttgctgctg tgctgcctat actttttgaa gaaggcatgg ccacttataa agggcaaaag
      601 cttgctgata aattgttaac aaaagatatg gctaaaattg tctcaaaagg cacgaaagtt
      661 gcatatttaa cttatattat cggtgcactt tctattgcta caacttcttt tgctacagta
      721 aaaattaaag actatctggt tgcaaaaaaa gagaataaat cagataataa ggttgtatga
      781 aaataacaac caaactcaat atagttttat atgaaccgga aatacctcaa aataccggta
      841 acattgtacg ttttgctgct tgtacaaaca gtgatgtgtt tcttgtcgga aaactcgggt
      901 tttctattga cagcaggcac ttaaagcgtg caggattgga ttactggggt gatgttaata
      961 ttcgtcgtat agaaaaaata gaggatttgt ggcaagagtt tcctgacaac gatttttact
     1021 atcttacaac caaaacacaa aattattata ctgatgttaa atataaagat ggagattttc
     1081 ttgtttttgg gccggaatcc cggggtattc ctgaagaact cctgttttca aaaggaaaac
     1141 attccataac tatacctatg caagacggtc agaggagctt gaatctttca aattcggttg
     1201 ctatagttgt ttatgaagcg ttacgacaaa taaacggata gtatttatgg aatatactga
     1261 aattactgcg cagtcagtca aggctcttat gcctcaaaga cctcagcaga gcaacaaagg
     1321 aacatttggc aaggtattaa atatcgcagg ttctatagaa taccagggtg ctgcttattt
     1381 gtcttctgtt gctcctttaa aaaccggtgc agggcttgtt actcttgcta caattgagcc
     1441 gctaattaat aaccttgccg gcaattgtcc atgggtaacg ttttatcctt tacgtgatta
     1501 ctataaaaaa tgcatagcat cagatgcttt tggtgatgtt ttaaacataa tagaaaacta
     1561 caatgtactt tctgtcggcc ctggtttatc tgatacagcg gcaacaaacg cttttgtgga
     1621 tgatcttatt aagtatctga ataaaaataa taaaaaaact gtaattgatg cagatgcaat
     1681 caatgttctg tctaaatcag aattgtcttc atttccgtca gattctgtta ttacaccgca
     1741 tcctgtggaa ctttcaagat tgataaacac acctgttaaa gatatacaaa atgacagaat
     1801 aaagtatgca aagctgactg ctgaaaaatt tggctgctgc gttgtgttaa agggcaatca
     1861 aacagttgtg tgtacaaaag atctggaggt atttgttaat accagcggca attctgctct
     1921 tgcaaaagcc ggcagcggtg atgttttaac aggtataatt tcaggtctta tggcgcaggc
     1981 ggtgtctgtg gaaaatgctg caaagcttgg tgtttattta catggactgt gcggagagct
     2041 tgcatctcaa gatttgtctt tgtacagtgt actggctact gaccagattg attatattcc
     2101 gcaagcaatc aaaaagattt tagaggctta ggatgaaagc tttttttata ccttacagtg
     2161 tgaataatgg cagatttaat atggactttg atgaaaagct gcttgacttt gcaatcaaaa
     2221 ccaatttatc aatgccgatt tttaggctct atggctggtc accggcatgt gtttctttag
     2281 gacgcaatca gagtgacagc cacatagata aaaatttttg tgtggctaat aatattgata
     2341 ttgtcaaaag gttaacgggt gggagggctc ttttgcacga taacgagctg acatactcgt
     2401 ttgtgtgccc tgtatctttt cttaaaaatg ggcagaccgt tattcaatca tacaaagaaa
     2461 tctcaggtgc actgtcagag ggtttaaaaa aagcaggcat tgatgctgtt ttccctcagg
     2521 ataaacaagc aaaaacaaat tatgaatact gtatgtcctt atcaaccggt gcagatttaa
     2581 gctataaggg aagaaagata gtcggttctg cgcagtttag aaaacagggt tatattttgc
     2641 agcatggatc tattatgttt gattatgata aagatgtcat aaaaaatatt tttggcgaaa
     2701 ctccggcatc ggaaaatata accacaataa aagaatcagc tcctcaatta aagttggaag
     2761 agctgtgtga ttctttaaaa aatggaatag aagactattt ttgtttgtct tttgtacctt
     2821 ttgactcttt ttagtatgta ccaggtataa gtttttcgta gtcatctact gtaccgttat
     2881 ccatacagca gagaatgatt gctttgccca gcgggtgcag gtctgatttt agataaagct
     2941 ttaattcttc tttgaagaag tcttcaagca tttttgcacc tttatcataa ccttcttctt
     3001 ctatttgagg ctgttttgtc acatcaaaga attttttaga tataggagta ccttctacgt
     3061 gaatattttc aggaatgtaa ccgccaagag ggtgtcttga tggctttagg ttaagctttc
     3121 taaatgaagc ttgacctctt cttgcaagat attctcttat tacccattct gccataaatc
     3181 caacttccca agctcctatg tgttggtttg gaattaaaat atttcttgtt ttagttgtat
     3241 tcataaattg ttcgagcaga atatttgcaa gatctactct ttttcctgtt gcaaatggcc
     3301 aaaaagaacc tactccttca ctttcaagct taaatgcgtc tttgccggtg cttgttatgc
     3361 tagggttacc aaaccctctt ggagcaacaa gcctccatag ccatgcaaga gccggtggca
     3421 aaatgtgcag cattccaaag ataccgtaag aaggattttc ttttgtgcaa ggcggagttc
     3481 taagtccaaa acttctgtaa tctatttcaa tagggccgtc ttgaatattc ttaatctgtt
     3541 ctctcggaat aataattctc gggttaggac attttttgcc aggggaatct tcaacgtgtt
     3601 cccagataag acatgttgcg tttggatgtg cctccaaatt gaaaaatatt agtggctcct
     3661 tagggtttgt ggtaacgttt tctaaattag gatctgttcc gtattttttg atatggtcaa
     3721 ttcttacaaa ccaagagcgt tctgcatcgg ctacacataa acggccgttg tctcttctga
     3781 aactatggtg gcacagtgcc atatcatctg ttacaggctg aagtttacaa ccttgttgta
     3841 acgcaagata tttttcttct cctgttacaa catttcgccc taataaaaga cgtccgtctt
     3901 cttcacggtg agcatattcc agcatttcac ttttgccgct gcctgatgct ccttcatgaa
     3961 gtatacttat gtcattgtca taaggagtgg taatatttac ggttgaagcg tgtactgtaa
     4021 caaaatcttc ttttaaacca agcgccaaca atacgccgta tacacctttt tttgcactcg
     4081 gaccggggta aagattgtat gagaaaactt cgtgtacaga gttttgctgg ttatgaacaa
     4141 ctacctgttt gccttcaaag tgagaatgtc tgaatggagg tgctacataa ataatagcct
     4201 taggttcaaa atctctttcc agtttatctg ttggtatcat accttgaagg tcataaatac
     4261 ttgctgcaaa gaatgctgcg tttttaggcg ccaccattaa tgccggatac ccgtattctg
     4321 ttccgccggc cataaaaggt actataataa tttcattgtc agaaagccaa tcaaaagttt
     4381 cttttcttaa cggttcaaac tctttgttaa atctttcttg aaatgtcact ttgtctgtca
     4441 tttcaatatt gttaacaacc atacagtttg ggtcacgtct tctcatataa gcttctgtgt
     4501 agtttactgc aataccgttt ttgcatctta ttacttctgc ttcagttact tcgcctttgc
     4561 cttctacgtt gtatacaacc ttgtaggtaa gattttcttt accatttgta gaaagttcaa
     4621 tgagttcatc tcttttttca ggcaaaataa catttgatga tttatcaagt aactgtttta
     4681 attcgtcgct aatgtgccag tgctgccaaa ccttgtttga agttaataaa ttttccattt
     4741 taccccttaa attaaatagt tatgcttttg attatattat aaattgcaac tttaatctaa
     4801 aaaataagca ttttttgtaa actaatctca atatttacat ttttttactt tagggcttga
     4861 ctgatagtaa ctatcaggta ttaaaatttt attatacgaa aggagactat aatgacagta
     4921 ttagacaaag taaactatcc aaatgacata aaaaaacttt ctattgccga actggatact
     4981 cttgctgatg agatgagaca gcttattata aaaaaagtta acacaacagg cgggcacatg
     5041 gggccaaatt tagggtttgt tgaacctaca attgcgatgc attatgtttt tgacacacca
     5101 aaagataaaa ttgtttatga tgtgtctcac cagtgttatc cccataagat tctcacaggg
     5161 cgcaaagagg gttttacaaa ccctcaacga tatcttgatt tttcaggtta tacaaacccc
     5221 gaggaaagcg aatatgattg tttcgttgta ggtcatacat ccacctctgt cagtctggct
     5281 gcgggccttg caaaatcaag agatttaaaa ggtgataaag aaaatgtcat tgccgtactt
     5341 ggtgacggtt cattaagcgg tggtgaagca ctcgaagggt tgaacaatgc agcggtactg
     5401 ggcagtaata taataattgt gtttaatgac aatgaaatgt ctattgctcc aaaccatggc
     5461 ggtatgtacg aaaatatacg ccttttaaga gagactaacg gacaggctga atgtaatttc
     5521 ttcaaagcaa tgggttttga ctattactat gtggaagaag gtaataatac tcaaaaattg
     5581 atagaagtgt ttgaaaaggt aaaaggtctc aaccatccag tacttgtgca tatacataca
     5641 ctaaaaggta aaggtttgtt gcctgcagaa caaaacaaag aagcttttca ctggataatg
     5701 cccggtacac tggataaaaa agatgatgac acaaacagca caccaacaga aaactacacg
     5761 agtgttactg ttgactatat cttgaataag gcaaagcaag atcctactgt ttttgcaata
     5821 tctcctgcta caccgggtgc gtatggcttt actccggatg taagagcaca acttggcaat
     5881 caatatactg atgttggtat cgctgaagaa cacgctgttg cgtttgcttc tgctatggca
     5941 aaaaatggca caaaaccaat cttgttgata ttgagctctt ttattcaaag aacatacgat
     6001 cagttgtcgc aagatttatg ccttaacaat tctccggcaa caatccttgt gcactgggga
     6061 gctataacag gggcggatat gacccatctt ggatgttttg atataccgct tgtttcaaat
     6121 ataccaaaca ttgtttatct tgccccgaca aataaagagg aatacattgc aatgatggat
     6181 tggtcattac aacagacaca acacccggtt gcaataagag ttccttttgg taattttgta
     6241 acaacaggaa tagaggataa aacagattat tcaatattga ataaatacag tgttgttaaa
     6301 gaaggagctg aaatcgcgat attaggcctt ggttcattct ttgaaaaggc agaagatttg
     6361 gctaaagaaa tccataaagc tctgggaatt aacgctacag tgattaatcc taaatttatc
     6421 acaggtgtcg atgaacagct tttagattct ttaaaacaaa atcacaggct tgttgttacc
     6481 ttggaagacg gtgttttagg cggcgggttt ggtgaaaaaa ttgcaaggta ttatggccct
     6541 tctgaaatga aagtgctaaa ctttggtgca agaaaagaat ttacggaccg agtccctctt
     6601 gaagaaatct atgaaagaaa tcatcttaca acagatttga tgattcaaga catcaagtcg
     6661 gtattataaa cactttaaaa aagaaaggtt ggaaagctcc aacctttctt tttatttatt
     6721 taattcttca attacttcat caacatggcc ttttacttta acttttcgcc attctttagt
     6781 tacttcgccc tggttgttga taagaaaagt cgagcggata attcccatgt attttcttcc
     6841 atacattgat ttttctcccc aagctccgaa tgcttcagag agagcatgct ctgggtcaga
     6901 gagaaggata aaatttaatg aatgattctc tttgaatttt atatgacttt ttatgctgtc
     6961 cgggctgact cctataacct gtgcatgagc actccatctg tttttgtttt ctttaaaatc
     7021 acaagcttct tgtgtacagc ctgaggtatt gtcttttgga taaaaatata aaattgtctc
     7081 ctgacctgta aaatcagaga ttctgtattc ctgttcttct ccgttttcat ttataccttt
     7141 taatgtgata tctaaatttt ttatattcat tatttactcc ttaactgatt tacaagattc
     7201 aatacatctg tactttggat ttcttttaat ttgatgattt tctttgtttt ttcatcaaga
     7261 tatttatgtc ctaccagtat cttaacatta tcaagataag caggatacca ttgaggtatc
     7321 attatcggct ggtgaaacag gcagattgtt ggtttgttca gcaggtaagc catatgcata
     7381 gtacctgtat caactgatat tacacaattt gcttttgata aaataactgc agtgtccatt
     7441 atagtagttt tgttagttat atctataaaa tttggcaagt tgtatgattt tattttttga
     7501 gcaatatcat gggctctgcc tgtgccaata aataccacag gcaattcaca tctagatgtg
     7561 aaatttacaa tttcatttat atcccaatca ttagcctctt gtttagacgt tgtggatatt
     7621 gcaatgtaat ctttttcaaa aggaataata tccttaaatt tttctgtcgt ttttaaatct
     7681 tcttcgtgag gtatttgtat atttgttttg taatcaatct cataattatt acacagcagt
     7741 cgcagcatat tggcgttaaa attgcctctg tatgtggaga aaaattcttt ttcatcaatt
     7801 ttgtaatgtt tattgataaa taaattaaga ggattgtaat ttttaaggta taatgaagca
     7861 attgcttttg gtgaaagtaa ttttgcaaac aaaacagtac gttcatgcgt atgtgttaaa
     7921 atggctgtat gtattttttc ttgttttttg atttgtttaa caagtttgaa aagtcctgta
     7981 acccctttgt gttcattact cttgtcatat gaatagcatt tgtcacaggt cattattttg
     8041 ccaaggtctt caaaagtttt agatacaatg agaacgagcc ttgaatcagg gtataatttt
     8101 tttatgttgc agcataacat ttcatttatt attgtatcgc ccaaccatcc caggctgata
     8161 acagctattg tttttccatt taaatttttc atacgtttat atccctgtac actttttcaa
     8221 ttgtatcaaa aaactgtgtg caatcaaacg ttagaattaa tttaacatat taatttaaaa
     8281 ggggcagttg ttgcatcatt cttttgagtt ttagtgcaat tcttggcata ggttctgcta
     8341 tggttaatcc gacaatgtca taactttcag caattttgtt aattaattta agagtttctt
     8401 ctatttttaa accttccgga catattccca ctgcgggtat tatttctgac ggttctaaaa
     8461 catccatatc aaagtggata agaacctttt tggctccggt tgtagaaatc cagtttgtaa
     8521 ccgcatcaac atcaattctt atatcttgcg gggaaagatg tttgagcccg nnnnnnnnnn
     8581 nnnnnnnnnn nnnnnnnnnn nnnnnnntct ctttcccagt ctctgattcc ggctaacagt
     8641 atattagatg cttttatttt ttcaggcaaa agcgaaacta ttttttagtc accttctccc
     8701 atcaatgctg ttactgccat tgcatggtag ccggtgtatg tatcaccagg cagtgttata
     8761 tcaggatgag catctatcca tattacagca acatcatttt gatatttgtg tgccagatat
     8821 gaaaaaggaa ctacactgac tgaacattct ccaccaaggg tt
//
LOCUS       DABS01000196            6127 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_4617, whole genome shotgun sequence.
ACCESSION   DABS01000196 DABS01000000
VERSION     DABS01000196.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6127)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6127)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6127
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..493)
                     /locus_tag="CPT85_08960"
     CDS             complement(<1..493)
                     /locus_tag="CPT85_08960"
                     /inference="COORDINATES: protein motif:HMM:PF09913.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20818.1"
                     /translation="MFWGFFYLVLSPPFTAADECSHFWKIHLLASGHFGTKKLTSDVM
                     LGIPRGKILSQSGEYIPLGMVKAGYRNIKTRGRLTEKTSFEVTKEILSYPLQKDIQVF
                     NTFPVPFYSGLSYLTSIPVMKVMQISKVNPGWMMYFLRLVSLFTYTALIYAAIKITPV
                     KKWL"
     assembly_gap    504..505
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    703..711
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            723..1019
                     /locus_tag="CPT85_08965"
     CDS             723..1019
                     /locus_tag="CPT85_08965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005279599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein GtrA"
                     /protein_id="DAB20819.1"
                     /translation="MYTGLHYSAAVVLSTIAGILFNFKTTGVLVFKNKDNSLIFKFIA
                     VYTLVCITGIIILRLAQIAHINLYFAGLVSTGICAVTAFLLNKNWVFKKHHEKN"
     gene            1003..1944
                     /locus_tag="CPT85_08970"
     CDS             1003..1944
                     /locus_tag="CPT85_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008370695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="DAB20820.1"
                     /translation="MMKKISLISSCYNEEENLDTLYDRVIKAIEPYSNNYEFEYILLD
                     NGSCDNTEGKLRELAQKDKRIKVILNARNFGHIRSPYYGMVQCSGDAIIYLASDLQDP
                     PELIGDFIKKWEEGYKIVLGKKTQSEESFPMFMIRTAYYELISRIADDDTSLVKNCTG
                     FGLFDRCVIDIIKQLDDPYPYIRGLICDIGFEKAFVEYKQPSRRRGISKNNFYSLYDN
                     AMIGIVKHSKVPLRLMTFLGFGLSFLSLGVAVFYFILKLMFWNEFALGLAPIIISLFF
                     LGSVQLFCMGVLGEYIGAIYTRVNKKPVVVEKERINF"
     gene            complement(2050..3030)
                     /locus_tag="CPT85_08975"
     CDS             complement(2050..3030)
                     /locus_tag="CPT85_08975"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20821.1"
                     /translation="MNNLTHEFALCDIDVDEKLITQTVEDESSEENAKEAGIETIETF
                     NTIVKKNDILQNYLKDIGRIKLLKTSEEQELGKKIKEGKSKEAQIAKKKLVQANLRLV
                     VSIAKKYIGQGVLFMDLVQEGSMGLIKAAEKFDYTKGFKFSTYATWWIKQSIVRAISN
                     HSRTIRIPVHMTDKIRLYKKVAAALASQLGREPTDEEMSAKLGISIKKLDNIKNAIFK
                     DPISLDTPIAEDLVLEDYVADDSYKAPDSTTQSVFLYKDVMSMLEFLNQREKTILINR
                     FGLDGHSKKTLEEIGKTLGFSKERIRQIENIALKKLKENKEIVHLQEYLN"
     gene            3181..3909
                     /locus_tag="CPT85_08980"
     CDS             3181..3909
                     /locus_tag="CPT85_08980"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20822.1"
                     /translation="MFNKEKIIEILNSEDLFIDNFILEAFIKNWKIEPIYEDADGVEF
                     FDEMAVEKIRSGIKNKQPKCEINIMDKDEIKPVDMAVEMSEPHLEEVEPPVEAVEQKI
                     EEIEQPIEDTEQPEPPVQEIVQEIYTEPQELPVSIINEVNKEVENELKNVTLDISNQT
                     LAVLAESIARKITYDVADFIKKTDFIEDAVQLGEYKKDNKLMLEKIDELISDNKILIQ
                     RIEELEKENKSFVKVFGNIYVKNR"
     gene            3919..5163
                     /locus_tag="CPT85_08985"
                     /pseudo
     CDS             3919..5163
                     /locus_tag="CPT85_08985"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    4061..4095
                     /estimated_length=35
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    5104..5117
                     /estimated_length=14
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5154..5228
                     /locus_tag="CPT85_08990"
     tRNA            5154..5228
                     /locus_tag="CPT85_08990"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:5186..5188,aa:Gly,seq:gcc)
     assembly_gap    5361..5362
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5482..6108)
                     /locus_tag="CPT85_08995"
     CDS             complement(5482..6108)
                     /locus_tag="CPT85_08995"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20823.1"
                     /translation="MKLIQSTNTLKRSTNEQLQGVYLLDKQNFLSNYTSVKSAERQID
                     LCSSLLQHANASNKNSSNLILIKIPTESLLRNGNLRFRRQEDFFYYQDMILKLQKGLK
                     QKFPLRLLSDDKNRAQFEKYVLDNKILSKAQLDKFMKDMKDAIHYGYGMDKLGQFEKN
                     SAVEFIFSKDISPDVIKGIKCRKFDLKNYMNLSSSNIDMQKLQDVFEF"
BASE COUNT         1946 a         1115 c         1078 g         1926 t
ORIGIN      
        1 acagccattt ttttaccggt gtaattttaa tggcagcata tatcaaagca gtatatgtaa
       61 atagagaaac cagcctcaga aaatacatca tccacccggg attaactttt gaaatttgca
      121 taactttcat tacgggtata gacgttaaat aagacagccc tgaataaaaa gggacaggga
      181 atgtattaaa aacctgaata tctttttgaa gaggataact caatatttct tttgtgactt
      241 caaaacttgt tttttccgtg agcctgcctc ttgttttgat atttctatat cctgctttta
      301 ccatgcctaa aggaatatac tctcctgatt gagaaagaat tttgcctctc gggattccga
      361 gcattacatc tgatgtaagt ttttttgttc caaaatgtcc cgaagcaagc aaatgtattt
      421 tccaaaaatg gctgcattca tctgctgcag tgaaaggagg cgataataca agatagaaaa
      481 aaccccagaa caaacaaatt attnnataat ttttcaggtt taaaaaagat tctctccacg
      541 tattcattcc tcaaacaatt tactaattta tatatgttaa cgtaaacttt atttattggc
      601 ttggatgtaa aatatgttaa attaaatctg ccatttatat tataatgtgc ctatgaaaat
      661 tgattggctg tttgtaaaat ttattctcgt agggatacta aannnnnnnn nttgcattgt
      721 tgatgtacac cggtttgcat tactctgctg cagttgtgct gtctacaata gcaggtattt
      781 tattcaactt caaaaccacg ggcgtgcttg tgtttaaaaa caaagacaac agtctgattt
      841 ttaagtttat tgccgtatat acgcttgttt gtataactgg tataataatc ttgcgtcttg
      901 cacagattgc acacataaac ctttactttg caggtcttgt gtccacggga atctgcgctg
      961 tgacagcgtt tttactcaac aaaaactggg tttttaaaaa acatcatgaa aaaaattagt
     1021 cttatctcga gctgctacaa cgaagaagaa aacctcgaca ccctgtatga cagggtaata
     1081 aaagctatag aaccgtactc aaacaattac gagtttgaat acattctcct tgacaacggc
     1141 tcgtgtgaca acacagaagg caaattaaga gagcttgcac aaaaagataa aaggataaaa
     1201 gtcatcctca acgctagaaa ctttggccat atacgctcac cctattacgg catggtgcaa
     1261 tgcagcgggg atgcaattat ttaccttgcc tccgaccttc aagacccgcc cgagcttatt
     1321 ggtgatttta taaaaaaatg ggaagaaggc tacaaaattg tgctgggcaa aaaaactcaa
     1381 agcgaagaat ctttccccat gtttatgata cgaacagcct actacgaact gatatcacgc
     1441 attgcagacg acgatacaag ccttgttaaa aactgcacag gattcggcct ttttgacaga
     1501 tgcgtaatcg atatcatcaa acagttagac gacccgtacc cctacatcag agggcttata
     1561 tgcgacatag ggtttgaaaa agcatttgta gaatacaagc agccttcccg ccgcagagga
     1621 ataagcaaaa ataattttta ctcgctctat gacaacgcaa tgatagggat agtaaagcat
     1681 tcaaaagttc ctttaagatt aatgacgttt ctcggcttcg ggctttcgtt tttgagcctt
     1741 ggcgtggctg ttttctactt tattttaaaa ctcatgttct ggaacgagtt tgccctgggg
     1801 cttgctccta ttatcataag cctgtttttc ctcggctctg tgcagttgtt ttgtatgggt
     1861 gtgctcggtg aatacattgg tgcaatctac acaagagtaa acaaaaaacc ggttgttgta
     1921 gaaaaagaac gtattaattt ttaaagtcaa aaaaaagcaa aaccctgaaa aggattttgc
     1981 tgaaatagcg tcactaagga gtttaagatg tcccaaggga attgtaattt ccctcaagct
     2041 tttatacagc taatttagat attcttgcaa atgcacaatc tctttgttct ctttgagttt
     2101 tttgagtgca atgttttcta tttgtcttat tctttcttta gaaaaaccca gtgtttttcc
     2161 tatttcttca agagtttttt tgctgtggcc gtcaaggccg aacctgttga ttaaaattgt
     2221 tttttctctc tggtttaaaa actcgagcat agacatgaca tctttgtaca aaaacacaga
     2281 ctgcgtggta gaatcaggtg ctttgtagct gtcatctgca acgtaatcct ccagcacaag
     2341 gtcctctgct ataggagtat caaggcttat ggggtcttta aatattgcat ttttgatatt
     2401 atcgagtttt tttatagaaa tcccgagctt tgcgctcatt tcttcgtctg tgggttctct
     2461 gcccagctgc gaagcaagag ctgctgcaac ttttttgtac agccttattt tatctgtcat
     2521 gtgcacgggg attctgattg ttctggaatg attggaaata gccctcacaa tagactgctt
     2581 tatccaccag gtagcatagg tgctgaattt gaaccccttt gtgtagtcaa acttttccgc
     2641 agcttttatc aaacccattg agccctcttg cacaaggtcc ataaacaaca caccctggcc
     2701 aatgtacttt tttgcaatgc tcaccaccag cctcaaattt gcctgtacga gttttttctt
     2761 ggcaatctgt gcttcttttg atttgccttc tttgattttt ttaccgagtt cctgttcttc
     2821 tgatgttttt aagagtttta tacggccaat gtcttttaga tagttttgca aaatatcgtt
     2881 ctttttgaca atggtgttaa aagtctctat tgtctcaatg cccgcctctt tcgcattctc
     2941 ttctgatgat tcatcctcaa ccgtttgtgt tattaatttt tcgtccacgt caatatcgca
     3001 taacgcaaat tcatgcgtca ggttattcat agtcttaatt cctcttaact cttttttatt
     3061 tctctcttct taaattttta gacgcaagtg ttaaaaaaaa gtttccgcat ttgttacaat
     3121 ctgtttcttt tttgtttgaa atatattatt atacaagtgt aaacaagggc tgaggtttca
     3181 atgttcaaca aagaaaaaat tatagaaatt ttaaacagcg aagatttatt tattgataac
     3241 ttcatcctcg aagcttttat caaaaattgg aaaatagagc caatttatga ggacgctgac
     3301 ggcgtagaat tttttgatga aatggctgtg gaaaaaatca gaagcggcat aaaaaacaaa
     3361 caacccaaat gcgaaatcaa catcatggac aaagacgaaa taaaacccgt tgacatggct
     3421 gttgaaatgt cagaaccgca cctggaagag gttgaacctc cggttgaagc agttgaacaa
     3481 aaaattgaag aaatcgaaca gccaatcgaa gacactgaac agcctgaacc ccctgtgcag
     3541 gaaattgttc aagaaattta tacagaaccg caggagctgc cggtttcaat tattaatgaa
     3601 gtcaataaag aagtcgaaaa cgaacttaaa aacgttaccc tcgacatctc aaatcaaacc
     3661 cttgccgtgc tggccgaatc tattgcacgc aaaattacct atgatgtggc agattttatt
     3721 aaaaaaacag attttataga agatgcggta cagctcggtg aatacaaaaa agacaacaag
     3781 ctcatgctgg aaaaaattga tgagctgatt tctgacaaca aaattttgat acaaagaatc
     3841 gaagagctcg aaaaagaaaa caaatctttt gtaaaagtgt tcggaaatat ttatgtaaaa
     3901 aaccgttaga aaaaagaaat ggcgcaaact cttaacctaa aaaagcagat gaaagcccag
     3961 ctttcaaaag atattttaaa tgctctggaa ctctgttccc aaacagcagg cgattatggg
     4021 tttaaaatat acctcatagg cggggttgta agagacctga nnnnnnnnnn nnnnnnnnnn
     4081 nnnnnnnnnn nnnnngccgt ggaattctgc cacaaacttg ctgataaaaa atactgcaaa
     4141 attctacagg tgcaaaacga gctaaaaacc gtcaaagcgc tttttaaaaa ccatataaca
     4201 atagattttg cttccacaag acaggaattt taccctcgcc gcggtcatct gccggttgtt
     4261 gtcaggatag gctgctcgtt ggaagaagat gtctacaggc gtgattttac cgtaaactcg
     4321 cttgcaatgt ctttaaacga aaacaacttt gccgatgtga tagattatgt aggcggagtt
     4381 gatgatttga aaaataaaac cctaagagtg ctccacgaca acagttttaa cgaagacccc
     4441 tcaagaatca tccgcgggct aaaatttgcc gcaaggtttg atctgcacag agactcgcac
     4501 acaaaagagc ttcaggaaaa atatataaac acacaaatgc atgacgatat ttcctggaca
     4561 cgcataaaat cagagctgaa atccgctttt tgtctcaata gtccaaggct ttatgacatg
     4621 tttgttgtca acaaaaacta caagctcata cacggcgaaa agcctgatat caaagggctg
     4681 gaaataaaat ctctcattga caaatacaac ccctcgtttg attggcttgt gtatctaggt
     4741 acagttttaa atgacgaaaa tattattgaa gcgttttgtt ttaaccgaaa cgaaaaaaaa
     4801 gtttttacag acaaaaaatg gctgctcgaa aataatttga gtgtcatgaa cacaaattat
     4861 gatatttatc agtttttcca caaaaaaagt ctggaagcta ttctaattta ttatcttttg
     4921 acaaaacgaa aagaaccgct tatttatctt gaaaaattaa taaagattag agtggaatca
     4981 aacggagaag atttaaaaga gctggggata caagacggca aaaaaatcgg cgccatgctc
     5041 gatgaaatat taaaaaagaa attggccgga acccttaaaa ataaagcaga tgagataaat
     5101 tttnnnnnnn nnnnnnnttt aaaatttgcc atgtataata aaaattaccg aatgcgagag
     5161 tagttcagtg gtagaacact tccttgccaa ggaaggggtc gcgagttcga gcctcgtctc
     5221 tcgctccata aaaaataagc acccgtcagg gtgctgtttt tttatgagta cttttattga
     5281 acttgcgcta attgtcactt aactttcatt tctcattttt gttttgtatt attccaataa
     5341 ttaacaaatg caataattag nnatttcttc agtaataata ttttgcctag attctttaag
     5401 ctttaaaact ctttgtctta tttctgctga aaatctttgg ctgggtgtat attacttgat
     5461 acttgtaagg taatatgaac ttcaaaattc aaatacatcc tgaagctttt gcatatcaat
     5521 attagaagat gaaagattca tgtaattttt taaatcaaat tttctgcatt tgattccctt
     5581 tattacatca ggagaaatat ctttactaaa aataaattca acagcactat ttttttcaaa
     5641 ttgccctaat ttatccatgc cgtaaccata atgtatcgca tctttcatat ctttcataaa
     5701 tttatccagt tgagctttgg ataaaatctt attatcgagt acgtattttt caaattgtgc
     5761 tctgttttta tcatcgctta acaatctaag aggaaatttc tgtttcaagc ccttttgcaa
     5821 cttaagaatc atatcttgat agtagaagaa atcttcttga cgtctgaatc ttaaattacc
     5881 atttctgagc agactttccg taggaatttt tataagtatt aagttagaag aatttttatt
     5941 gctggcatta gcatgttgta acaacgaaga gcacaaatca atttgtctct ctgctgattt
     6001 tacacttgta taatttgata aaaaattctg cttatctaat aaatatacac cctgaagctg
     6061 ttcatttgtg gaacgtttta aagtatttgt tgattgtatt aatttcatat ttgcttcaga
     6121 ggttata
//
LOCUS       DABS01000197           17291 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9656, whole genome shotgun sequence.
ACCESSION   DABS01000197 DABS01000000
VERSION     DABS01000197.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 17291)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 17291)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17291
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            158..1876
                     /locus_tag="CPT85_09000"
     CDS             158..1876
                     /locus_tag="CPT85_09000"
                     /inference="COORDINATES: protein motif:HMM:PF03717.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20775.1"
                     /translation="MGRNYKNYKSDKEKFKEFDKKLIFWQIICIIISFIIAAYLFLIM
                     VVDVKNYRAQAKRQRSAKSFVMRGAILDRNGIKLASDKTSFDVYAHQEYFDHTPNELA
                     AILAPVLGVNKNQLAKKLAQDEKIIVLKKDVSRTTAIEIRKLGLREISLGKKNERVYP
                     QGTMAAHILGYYNPDADVAAGIELTAKDKLEEVEQDVNFEKTPDGDIIYEVNTDPAAT
                     TAPLRGKSITLTLDSAIQHVCEVELNKVIREKGAIRGTIVVMNPKNGEILGYAIYPTY
                     NPNNYKKATLTQLTNWTLSDVFEPGSTFKVLTIASAIENGRLHENSKILDTGKLEIDK
                     WTIKNYDYATKPFPGNIDLLYLFEHSSNVASAKAALMMTRQEHYNTLKKFGMGEKTGI
                     DLPGESRGLIPPVGDWHKSTHASIGYGYSISVTALQMISAISAIANDGVRVTPHVIKY
                     XEEALKVKHIQTVSPETAHTVARLLAGSIGRSKSPVNLEDYHVAAKTGTARKSIAGAK
                     GYTNKLVTSIIGFLPASNPQVEIYVVIDSPSKGALWGSTVAAPVFREVALQTARIMNI
                     PPDKKK"
     assembly_gap    1508..1509
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1898..3355
                     /locus_tag="CPT85_09005"
     CDS             1898..3355
                     /locus_tag="CPT85_09005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_389401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="DAB20776.1"
                     /translation="MKLSELIKDIKTKNVLNNRDTEITGISYNSKTVGKGEIFVCLKG
                     EHSDGHEYAKMAVQNGAAALFCEKELDIDVPQVIVDSTRHHIADLAAAFYNYPSKNVK
                     LIGVTGTNGKTTVTHLIQRIVEDAKHRCALIGTLGYKLSGKDSYHDAKHTTPQAPELQ
                     KTLEMICENKIDYVAMEVSSHALEQNRVGGCDFDGAVFTNLTQDHLDYHITMNNYFEA
                     KALLFRGLKPGGFAVINNDDEYAERFKAVVPEGVKIYTYGIKNDADITARDIDFSIHG
                     AKFNCKVNDETGAVNLQMNGMFSVYNALAALAAGIAMGFDKDICIKALEETKSVDGRF
                     EIVNKQPLVIVDYAHTPDGLENVLKAARELTPEGSNLICMFGCGGDRDATKRPKMGKI
                     ADEAADIVVVTSDNPRSEDPQLIISDILAGIKTVNTQKVYVEPDRRTAISMLKNIAKE
                     NDVVVLAGKGHEDYQILKNETIHFDDREEARKVFN"
     gene            complement(3394..>4604)
                     /gene="uvrC"
                     /locus_tag="CPT85_09010"
     CDS             complement(3394..>4604)
                     /gene="uvrC"
                     /locus_tag="CPT85_09010"
                     /inference="COORDINATES: protein motif:HMM:TIGR00194"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="excinuclease ABC subunit C"
                     /protein_id="DAB20777.1"
                     /translation="MGKYAAKEDFEKAARYRDSWMDVQKTMEHQKVVFENTNINQDII
                     AVYNESNLFVVSLLQIRQGRLTDKKDFQFSNTEGNLSSEYEVLTTFLKEYYTMASESE
                     IPNTIVLPRLLEQNDIELYTNWLASVAGKKVKISDAPTKRNIELLNLAQKNAKFFFEK
                     VKLQKLTEIQRDYNEVGSYIQEKLGLTKFPYVVECFDISHIQGTNTVASMVTFENGLP
                     KKSRYRKFKVRSTESKPDDFKSLQEVVERRYFGKLTETLPMPDLIIIDGGKGQLSSVM
                     EIFESKGLEVDVVSLAKRLEEVFKPHKSEPVIFPINSPALYFFQRIRDEAHRFAITYH
                     RKLRGKKATESVLDEIKGLSKTSKEALMNEFKDVKKISQASYEQLCEKIPKRSAKAVY
                     NFFNPNVQIV"
     assembly_gap    4605..4663
                     /estimated_length=59
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<4664..5245)
                     /locus_tag="CPT85_09015"
     CDS             complement(<4664..5245)
                     /locus_tag="CPT85_09015"
                     /inference="COORDINATES: protein motif:HMM:PF01541.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit C"
                     /protein_id="DAB20778.1"
                     /translation="MATKNANLPQEVQQTLSIIPELSGSYQYYDKDGEIIYVGKAKNL
                     KKRVYSYFNKHHDSPKLRVMVPQIAKIQFIVTDSEVEALILESHLIKKHKPKYNVLLK
                     DDKKFPYFVITEEEYPRIIVARKANKNKIKGKYFGPYTDSRAMYATLDLIKKLFPLKQ
                     CKNPKFKDRPCLYYHIGRCMAPCQRLITPDEYKK"
     gene            complement(5269..5766)
                     /locus_tag="CPT85_09020"
     CDS             complement(5269..5766)
                     /locus_tag="CPT85_09020"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20779.1"
                     /translation="MLIDSTRKDLDSLMGTTNQMSGRIMVLTDNLNNIIGDKEFKDTL
                     ISTTKSIDRLSRNLNTILEDPKTRQTIEDLQVASKNISEIAQYVNTMTKDPVLKSQVT
                     TTVTKFNKALDDLSCTLETVNGLTTDKKEELNSTINNVAETSKNLRKFSEKLNKRFLL
                     FRLMF"
     gene            complement(5760..6635)
                     /locus_tag="CPT85_09025"
     CDS             complement(5760..6635)
                     /locus_tag="CPT85_09025"
                     /inference="COORDINATES: protein motif:HMM:PF02470.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20780.1"
                     /translation="MRFSSSFKVGILTLTALIILIFSILWIKGRALSAGERLYVDFKD
                     VNGIRAGSAVQLMGFRIGQIEEITPQLSNPDDPYVRIKFVITEPDITIPNAATISIQQ
                     TGIIGEQFLEITPPKLRTIYLPINKRSQVLHANDNVQMVLSGKPYDVGKVKKIEIIDT
                     KTLPINIQEEVKTQSAYKVGYIITLPGLQLPERMLGKVKVENTKHYLSLKPATDMKFE
                     YPQSTSRFTVIEPLRLSDFMDLQYRSASALAETNEKLSAILSDDVIADIKKIVGNVDV
                     LTIKANSTXLIKHKC"
     assembly_gap    5782..5783
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    6674..6728
                     /estimated_length=55
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<6729..7409)
                     /locus_tag="CPT85_09030"
     CDS             complement(<6729..7409)
                     /locus_tag="CPT85_09030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013638405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="DAB20781.1"
                     /translation="MSIEVKNLKKSFKDKVILDDVSFKVEDGEILAVVGLSGAGKSTI
                     LKLICGLTKPDSGEIIVSPGDIAMVFQYSALFDSLNVCENIAFALKERKEFKNKYTEK
                     QLKEIVAQKLKLVGLEGIEEKMPHELSGGMQKRVSFARAIVTDPKTILYDEPTAGLDP
                     VSSTMIEDYIVRLRDEFNPASVIVTHQLSTIQRCADKVIMLYNTKIVYSGTPQDMIDN
                     GNEYTKQFI"
     gene            complement(7445..8272)
                     /locus_tag="CPT85_09035"
     CDS             complement(7445..8272)
                     /locus_tag="CPT85_09035"
                     /inference="COORDINATES: protein motif:HMM:PF02405.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="DAB20782.1"
                     /translation="MNHSRALEIFKQSATYNLAKLLIEQMQEFFETLGEMGIRTCQVF
                     KLIFVDLFKRQMNWKLLIDQCSRFAVDSLPITLTIVGMVSVIISMQVAPEMVKQGGEK
                     FVGMLMAVVTTREMGAIMSGFAIISMIGSAYASEIATMRVTEQVDALKVLKVNPIDYL
                     FVPRVLAGFIMMPFVVILASTFGLICGGVAAYLSAHVSRLNYISSLWQGLYLKDIFVA
                     LGKSACFGAAIAIISCTCGYLAFGGAKGVGIATTKAVVWSFVAICIIDYIFATIFFF"
     gene            8355..10192
                     /gene="recQ"
                     /locus_tag="CPT85_09040"
                     /pseudo
     CDS             8355..10192
                     /gene="recQ"
                     /locus_tag="CPT85_09040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538869.1"
                     /note="frameshifted; too many ambiguous residues; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
     assembly_gap    8507..8528
                     /estimated_length=22
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    10243..10302
                     /estimated_length=60
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            10475..11998
                     /gene="rny"
                     /locus_tag="CPT85_09045"
     CDS             10475..11998
                     /gene="rny"
                     /locus_tag="CPT85_09045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012447930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="DAB20783.1"
                     /translation="MTLLTALLIIALIAAAGAAFVIWQKKKTXKTVQALYDKLSKEST
                     EKENLLKKEAMIQAKEALHAEREKFDDEVRERRQDLQRAEDKLLKKEDMLEDKIQEAS
                     DKEYAAQKKMDELLEKEDYLADLIAKQIEETEKIAGMSREEARHMLMEQLKQDLQQEQ
                     MQLIKENEAKIRESAKEMAQDILSTTMQRCAIDQVVESTVSVVNLPSDEMKGRIIGRE
                     GRNIRTLETLTGVDLIIDDTPEAVVLSSFDXREIAKVALEKLISDGRIHPVRIEEMVE
                     KAQEEIEEKIKKEGENAAVDMGVLNLHKELIKTLGRLYYRTSYGQNVLKHSLEVGHIA
                     GMLAAELGANVQIAKRAGLLHDIGKAVDQTQDGTHIELGVELARRYGEKEEVVHAIEA
                     HHDDVTANTIEAVLVKLADAISAGRPGSRRDTLEIYIKRLKKIEEIASSYEGIKQSFA
                     VQAGREVRIIVQPDMFDDLASAKLARDIAKRIEEELDYPGQIRVTVVREIRTTEIAK"
     assembly_gap    10559..10560
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    11220..11221
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            12037..12865
                     /locus_tag="CPT85_09050"
                     /pseudo
     CDS             12037..12865
                     /locus_tag="CPT85_09050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011938029.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
     assembly_gap    12592..12593
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            12881..13744
                     /locus_tag="CPT85_09055"
     CDS             12881..13744
                     /locus_tag="CPT85_09055"
                     /inference="COORDINATES: protein motif:HMM:PF02811.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase"
                     /protein_id="DAB20784.1"
                     /translation="MKVDLHIHTTYSDGVFSPEKIVDTAIDAGLDAIAITDHDNVLAY
                     PIALNYAQKIADSGGKALEILPGVEINTIYKDIEIHILGYFMNRDDSDFQAMLKSQQK
                     ARIEQTEQILHLLNKKEGIHVTFDKLKSLVAEGGSIGRPHIAKAITLAGGTTSVMEAY
                     NKYINNDSEVYVQRKTISPHEAIEIIYDAGGIPVFAHPFDVEDAENLIKEFMHYGLRG
                     VEAYHRKHSPAMVEYYSSIAEKNGLIITGGSDFHAPNPNNGQIIMGKNFIPEWIYDKL
                     MKEKKQLDLAR"
     gene            13877..14527
                     /locus_tag="CPT85_09060"
     CDS             13877..14527
                     /locus_tag="CPT85_09060"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20785.1"
                     /translation="MKNNIKTLKAFNMVEIMIVVCLLVTTVILCIPTIFNNSKEAKII
                     SGWKRIYAEMQSNFEVFNVSDADVIEKICRSNVAQKEPEIFKVISPYLNVDLSRNPNT
                     LKSYHYKFKNGSQIPMQSMVFTRFFSYQENGNIVGFKWLDCECSEKVPCATVLFDMNG
                     IEKPNRIGRDIFGIYIYKNRIEAFGAEFTNDSLERSCSSHSNGMSCSEYYLRGGKF"
     gene            complement(14528..15901)
                     /locus_tag="CPT85_09065"
     CDS             complement(14528..15901)
                     /locus_tag="CPT85_09065"
                     /inference="COORDINATES: protein motif:HMM:PF09913.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20786.1"
                     /translation="MLGMAKVLNPEKIFVLFALFFGFLMVFLIPPFQSPDETAHLCRA
                     YGISRGQFFPQKVNGNVGSFLPENLLKFLKASTNSDSMDLFFAKRIKYSPEKFKEISA
                     IKLDNNKKVFIDYANMARLSPVSYFPQSTGIIIASLCTQHIWLLLLAGKIVTLLFYTL
                     LGYFSIKSIPFLKWACVFLLLCPMSLSLGASISADAVLISVSVLYISKIFQYSFDTQQ
                     KINNKQLALLSLLAVSLALTKQSFLMTLFILFIPKEKFETPYLKTLCFTILLPFAAAV
                     LWSLFALTILRPLNGSDFSSHMLYILEHPVKFTALTLQYIPGLWNFALIEKMIGVLGW
                     LNIYFCAIFYHLYFVMILANTLYSIVGEYPKTTFYQKAVLGVLTALNYFSICVLIFCT
                     WTQKNQFEYIEIQGRYLLPFVLPFLAFCIMVVKPLKENQKIAILNIVFLFSALLYVIV
                     ELFKVFY"
     gene            complement(15911..16420)
                     /locus_tag="CPT85_09070"
     CDS             complement(15911..16420)
                     /locus_tag="CPT85_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012629743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20787.1"
                     /translation="MIEMKVMGIALDTRTGSPIVVLHDMDNRKALPIWIGSAEASAII
                     RRIENIEVSRPMTHDLIASIVEKTGGTIDRVEINDVEKETYYAIIYIKDKEGNEVEID
                     ARPSDAIAVAIRVDAPIFVTANVLANGSVSCDAAKDEEEAQEFRSFIQSIKPSDFEKL
                     LKHDKESDQ"
     gene            16485..16922
                     /gene="aroQ"
                     /locus_tag="CPT85_09075"
     CDS             16485..16922
                     /gene="aroQ"
                     /locus_tag="CPT85_09075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011938718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="DAB20788.1"
                     /translation="MKFLIINGPNINLLGTREPEIYGSMTLDDINKDIAKCAKELGVE
                     TETFQSNIEGEIVDKIQQAKGVFDGIVINPAAYTHTSVAIRDAISAVGIKAVEVHISN
                     IHAREEFRKNSLIAPVCIGQITGFKANSYKLALRALVDIAKIS"
     gene            17032..>17291
                     /locus_tag="CPT85_09080"
     CDS             17032..>17291
                     /locus_tag="CPT85_09080"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20789.1"
                     /translation="MNYQIGIKFLFTGISLIILSFCANTAAFASDYQYKILDPKYNPD
                     AQRVVDGELPPVQEVEPYESSSFDLKTFMAIFALIVFPMFFMS"
BASE COUNT         5403 a         3186 c         3466 g         5030 t
ORIGIN      
        1 taaaaaatag aatcctaacc caaaccgctg cggcgttgtt atccgtttcg tccagtcatc
       61 gcagtaattt gttgctctca ttaattaacg gatgatattt tagtttttta cataaattaa
      121 tgaatctaat tgcggtgtgt attgtataat ttaatttatg ggacggaatt ataaaaacta
      181 taagagcgat aaagagaagt ttaaggaatt tgataaaaag cttatttttt ggcagattat
      241 ctgcataatt ataagtttta ttattgctgc atatttgttt ttgataatgg ttgtggatgt
      301 aaaaaactac cgtgcgcagg caaaacgcca gcgaagcgcc aaaagttttg ttatgcgagg
      361 tgcaatcctt gacagaaacg gtatcaaact tgcttcggat aaaacgtctt ttgatgtgta
      421 tgcccatcag gaatattttg accacacacc aaatgagctg gctgcaatac ttgcccctgt
      481 gctcggcgtg aacaaaaacc agcttgctaa aaaacttgct caggatgaaa aaattatcgt
      541 actcaaaaaa gatgtctcaa gaacaactgc aatagaaatt agaaaactcg gcttaagaga
      601 aataagcctc gggaaaaaaa atgagcgtgt atacccgcag ggtacaatgg ccgcccatat
      661 tctcggatat tataatccgg acgctgatgt ggctgcagga atcgagctta ccgccaaaga
      721 taaattagaa gaagttgaac aggatgttaa ctttgaaaaa actcctgacg gcgatattat
      781 ttacgaggta aatacagacc ccgcggcaac tacagctcct ttaagaggca agtcgattac
      841 cttgactctt gattctgcta ttcagcacgt atgcgaggta gaactcaata aagttatccg
      901 tgaaaaaggt gcaatcagag gaacaatcgt tgttatgaac cctaaaaacg gcgaaatcct
      961 cggttatgca atttatccta catacaatcc caacaactat aaaaaagcaa cgcttacaca
     1021 gcttaccaac tggacattga gcgatgtttt cgagcccggt tctacattca aggtgcttac
     1081 aatagcctct gccattgaaa acggaaggct gcacgaaaat tcaaaaatcc ttgatacagg
     1141 taaactcgag attgataaat ggacaatcaa aaactacgac tatgcaacaa aacccttccc
     1201 gggaaatata gatttgttgt acctttttga gcactcaagc aacgttgcca gtgcaaaagc
     1261 tgctttaatg atgacaagac aggagcatta caacacgctt aaaaaattcg gaatgggtga
     1321 aaaaacaggc atagatttac ccggtgaatc cagaggactc atccctcctg tgggcgattg
     1381 gcacaaatca actcacgctt ctatcggata cggttattca atttcagtta cggctttaca
     1441 aatgatttct gctatttcag cgatagcaaa cgatggggta agggttactc ctcacgtaat
     1501 taaatacnna gaagaagctt taaaagtaaa acatattcaa actgtgtcac ccgagactgc
     1561 tcatactgta gcaaggctcc ttgcaggcag cattggccgt tcaaagtcac cggtaaacct
     1621 tgaagactac catgttgcag ccaaaacagg tactgcaaga aaatctattg caggtgcaaa
     1681 agggtataca aacaaactcg ttacctccat tatcggattt ttgcccgcaa gcaatccgca
     1741 ggttgaaatt tatgtagtaa tcgactctcc gtcaaaaggt gctctatggg gaagcacggt
     1801 tgctgcgccg gtgtttagag aagtggctct tcaaaccgca cgtattatga atattccacc
     1861 tgacaagaaa aaataattta atttagagga tattgttatg aaactaagcg aattaattaa
     1921 agatataaaa acaaaaaatg ttttaaacaa cagagacact gaaattacag gtatctctta
     1981 caactccaaa actgtcggta aaggcgagat ttttgtatgc ttaaaaggcg agcactctga
     2041 cgggcacgaa tatgcaaaaa tggctgtgca aaacggagca gcagcgctgt tttgtgaaaa
     2101 agagctcgat attgacgttc cacaggttat agttgactca acccgccacc atatagctga
     2161 tttagcagct gctttttaca actatccttc aaaaaatgtt aaacttatag gcgttacagg
     2221 aacaaacgga aaaacaactg ttacacacct tatacagcgt attgtggaag atgcaaaaca
     2281 cagatgtgct cttattggta cactggggta caagctctcg ggcaaggatt cctaccatga
     2341 cgcaaaacac acaactcctc aggcgccgga acttcaaaag acgcttgaaa tgatttgtga
     2401 aaacaagatt gattacgttg caatggaggt aagctctcac gctcttgagc aaaaccgtgt
     2461 tggagggtgt gactttgacg gtgctgtgtt tacaaacctt acgcaagacc accttgatta
     2521 tcacattaca atgaacaatt attttgaagc caaagcactg ctttttagag ggctaaaacc
     2581 gggcggtttt gcagtaataa acaatgatga tgaatacgct gaaagattca aggctgttgt
     2641 tccggaaggt gtcaaaattt atacttacgg tataaaaaat gatgctgata tcactgcacg
     2701 cgatattgat ttttctatcc acggtgcaaa atttaactgc aaggtaaatg atgaaacagg
     2761 tgcagtaaat ctacaaatga acggaatgtt cagtgtttac aatgctctgg ctgcacttgc
     2821 tgccggtatt gcaatggggt ttgacaaaga tatttgtata aaagcgcttg aagagacaaa
     2881 aagcgttgac ggtcgttttg agattgtaaa caagcagccg cttgttattg tggattatgc
     2941 tcacacgccc gacgggttgg aaaatgtctt gaaagctgca agagagctga ctcccgaagg
     3001 cagtaatctt atttgtatgt ttggctgcgg cggagacaga gatgcaacaa aacgaccaaa
     3061 gatgggtaaa attgcggatg aggcagctga tattgttgtt gtcacatctg acaaccccag
     3121 aagcgaagac ccgcagctga ttatttcaga tattctcgcc ggaataaaaa ccgttaatac
     3181 gcagaaggtt tatgttgaac ctgacagaag gacagctatt tctatgttga aaaatattgc
     3241 taaagaaaat gatgtagttg tgctggcagg taaaggtcac gaagattatc agattcttaa
     3301 aaacgaaaca atccactttg acgacagaga agaggcaaga aaagttttta attaaataat
     3361 ctcatgaata aaaaaatatt attcatgtaa ttattaaact atctggacat taggattgaa
     3421 aaagttgtaa acggctttgg cgctgcgttt tgggattttt tcgcagagct gttcatagct
     3481 tgcttgggaa atctttttca catccttaaa ctcgttcatc aaagcttctt tgctcgtttt
     3541 tgacaatccc tttatctcat cgagcacaga ctctgttgct tttttgcctc tgagttttct
     3601 gtgatatgtg atagcaaatc tgtgtgcctc gtctcttatc ctctggaaaa agtacaaagc
     3661 aggcgagtta atcggaaaaa tcacaggctc tgatttgtgc ggtttgaaca cttcttccag
     3721 tcttttagcc agcgaaacca catccacctc gagccccttt gactcaaaaa tttccataac
     3781 agatgaaagc tggcctttgc cgccgtctat tataatgagg tccggcatgg gcagggtctc
     3841 tgtgagtttg ccaaagtagc gtctttctac cacttcttgc aaggatttaa aatcatcggg
     3901 ctttgattct gtcgaacgga ctttaaactt tctgtagcgt gactttttgg gcaatccgtt
     3961 ttcaaaggta accatagaag cgaccgtgtt tgtgccttga atatgcgaaa tatcaaaaca
     4021 ttccacaaca tacgggaatt ttgtgagccc cagtttttct tgaatatagc tgccgacctc
     4081 attgtaatca cgctgaatct ctgtgagttt ttgcagcttt accttttcaa aaaagaattt
     4141 tgcattcttt tgcgcgaggt ttaaaagctc aatgtttctt tttgtcggag cgtctgaaat
     4201 tttaactttt ttgcctgcaa cagaagcaag ccagtttgta taaagctcaa tatcgttttg
     4261 ctcaagcagt cttggcagga caatcgtgtt tggaatttca gattctgatg ccattgtgta
     4321 gtattctttt aaaaatgttg ttaaaacttc atattcactg gacaagttgc cctctgtgtt
     4381 ggagaattgg aagtcttttt tgtctgtaag gcgcccctgt cttatctgta aaagcgatac
     4441 cacaaaaagg ttgctctcgt tgtagacagc gatgatatcc tgatttatat ttgtgttttc
     4501 aaatacgact ttctggtgtt ccattgtttt ttgaacatcc atccagctgt cgcggtacct
     4561 tgcggctttt tcaaaatctt cttttgccgc atattttccc atttnnnnnn nnnnnnnnnn
     4621 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnttttttg tactcatccg
     4681 gtgtaatcag cctctggcaa ggcgccatac agcggccaat gtggtaataa aggcacgggc
     4741 ggtctttaaa tttcgggttt ttgcattgtt ttagaggaaa aagttttttt attaaatcta
     4801 aagttgcata cattgccctg gaatctgtgt aggggccgaa gtatttgcct tttattttgt
     4861 ttttgttggc ttttctggct acgattattc tcgggtattc ttcttctgtt atgacaaaat
     4921 acgggaattt tttatcatct tttaaaagca cattgtactt tggcttgtgc tttttaatga
     4981 ggtgcgattc cagaataagc gcctcaacct cgctgtcagt gacaataaat tgaattttgg
     5041 cgatttgcgg caccataacg cgcagcttgg gcgagtcgtg atgtttgtta aaatagctgt
     5101 agacacgctt tttaaggttt tttgcttttc cgacgtagat aatctcgccg tccttgtcat
     5161 aatactgata agaaccgctc agctccggta ttattgataa tgtctgctgc acctcctgcg
     5221 ggaggtttgc gttttttgta gccatatatt aagtatagtt ttaatttttt agaacatcaa
     5281 tctgaaaaga aggaatcttt tgttcagttt ttcagagaac ttgcgaaggt tctttgaagt
     5341 ttccgctacg ttatttatag tgctatttaa ttcttctttt ttgtctgttg tcagtccgtt
     5401 aacggtttcc agtgtacaag acaggtcatc aagcgctttg ttgaattttg taaccgttgt
     5461 tgttacctgt gacttgagca cagggtcttt tgtcatggtg ttcacgtact gtgcgatttc
     5521 agatatgttt ttgcttgcaa cctgcaaatc ctcaatagtt tgccttgttt tcgggtcttc
     5581 aaggatggtg ttgaggtttc ttgacaatct gtctattgat tttgttgtgg aaatcaatgt
     5641 gtctttaaac tctttgtcgc cgattatgtt gttaagattg tctgtgagca ccattattct
     5701 gcccgacatc tgatttgttg tacccatcaa tgaatcaagg tcttttcttg tagaatcaat
     5761 cagcatttgt gttttatcaa gnntgtactg ttggctttta ttgtaagtac atcaacgttt
     5821 cctacgattt ttttgatgtc tgcgattacg tcatcggaaa gtattgcgct tagtttttcg
     5881 tttgtttccg caagagctga tgctgatctg tattgcaaat ccataaagtc agagagtctt
     5941 aaaggttcta tgacagtaaa tcttgaagtg ctttgcggat attcaaattt catatctgtt
     6001 gcgggtttta ggctgagata atgttttgtg ttttctactt taactttacc cagcattctt
     6061 tcaggcaact gtaaacccgg cagcgtgata atataaccta ctttataagc tgattgggtt
     6121 tttacctctt cttgaatatt tatgggtagg gtttttgtat ctataatttc tattttttta
     6181 actttaccca catcataagg cttgccgctc aaaaccatct gcacattgtc gttggcatgc
     6241 aaaacctgtg aacgtttgtt gataggcaga tagattgttc tcaattttgg cggggtgatt
     6301 tcaagaaact gttcgccgat aatacctgtt tgctgaatag atattgttgc agcattaggt
     6361 atggttatat caggttccgt gataacaaat tttattctta cataagggtc atcggggttg
     6421 gaaagctgcg gggtgatttc ttcaatctgt cctattctaa aacccatcag ctgcacggcg
     6481 gaacctgctc ttatgccgtt aacgtcttta aaatcaacat aaagcctttc acctgcggat
     6541 aatgctcttc ctttaatcca taatatggag aaaataagta ttatcagtgc tgtcagggtc
     6601 aatattccga ctttaaatga tgatgaaaaa cgcattttat tccgattcct ttgtgtttcg
     6661 cattaaactg ttcnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     6721 nnnnnnnnta taaactgttt tgtatattcg tttccattgt ctatcatatc ttgaggagta
     6781 cccgagtata cgatttttgt attatataac ataataactt tatcagcaca cctttgaatg
     6841 gtggataatt ggtgcgttac tatcacagaa gcggggttaa attcgtctct taaacgcaca
     6901 atgtagtctt caatcattgt ggaagataca ggatccagcc ctgctgtggg ttcgtcatag
     6961 agaattgttt tggggtctgt tacaatggct cgtgcaaagc ttacacgttt ttgcataccg
     7021 cctgaaagct catgcggcat tttttcttca ataccctcaa gccccacaag tttgagcttc
     7081 tgggcaacaa tctcttttag ctgtttttcc gtgtatttgt ttttaaactc ttttcgttct
     7141 ttgagtgcaa aagcaatatt ttcacacaca tttaaagagt caaacaaagc agagtattga
     7201 aaaaccattg caatgtctcc tggggaaaca ataatttcgc cgctgtctgg ttttgtcagt
     7261 ccgcagatga gttttaaaat cgtacttttc ccggcaccgc tcaaacctac tactgcaagg
     7321 atttctccgt cttcaacttt gaaagagacg tcgtctagaa taactttatc tttaaatgat
     7381 ttttttaaat tttttacttc tatgctcatt atttttgtcc tgtattgctt ttgttaagtt
     7441 atgcttaaaa gaagaaaatt gttgcaaaaa tataatctat tatacaaata gcaacaaaag
     7501 accatacaac cgcttttgtt gttgcaatac caactccttt tgcaccgccg aatgcaagat
     7561 agccgcatgt gcagctgata atagcaattg ccgcgccaaa acatgctgat ttgccaagtg
     7621 caacaaaaat atctttaaga taaagcccct gccacaaaga gctgatgtag ttgagcctgc
     7681 taacatgtgc gctcaagtat gctgcgaccc cgccgcaaat aagcccgaat gtagaagcga
     7741 gtataaccac aaaaggcatc ataataaacc ctgcaagcac tctgggcaca aaaagataat
     7801 caatagggtt aactttcagc accttaagtg catcaacctg ctctgttaca cgcattgttg
     7861 ctatttccga agcgtatgct gaacctatca tggagattat tgcaaatcct gacataatgg
     7921 cacccatttc gcgcgtggta acaacggcca tcagcattcc cacaaatttt tcaccgccct
     7981 gttttaccat ttcgggcgca acctgcattg aaataatgac tgataccatc cccacaattg
     8041 tgagagtaat cggcagagaa tccactgcaa aacgcgagca ctggtctata agaagtttcc
     8101 agttcatctg tcttttgaac aggtcaacaa agatgagttt aaaaacctga caggtgcgaa
     8161 tacccatttc tccaagagtt tcaaaaaact cctgcatttg ctcaatcagc agttttgcaa
     8221 gattgtatgt ggcactttgt ttaaaaattt ctaaagctct agagtgattc atgcaacaat
     8281 tgtatcaaag atttcaggtt ttgtaataca ttttatgatg gggttattat aaatatcatg
     8341 ataatatttt aaacatgaaa gatatatgca aaaaaaatga cccgcagacg gtgttgaaca
     8401 aagtttttgg ctataagaat tttagaaaag gccagaaaga tatcattgac agtattctct
     8461 cgggtaaaga tacacttgtg cttatgccca caggcggggg caaatcnnnn nnnnnnnnnn
     8521 nnnnnnnngt gttgcaatag tcgtctctcc tcttattgct cttatgcagg atcaggtgaa
     8581 tactctcaaa tctcttggtg taaaggccga atttttaaac tctactttgt catttgacga
     8641 gtcaaaagat atcataaaaa aaacattgaa caatgacctt gatctgcttt atgtgtctcc
     8701 ggaaaggctt aatacagaga gctttttaga tgttttgcaa aaaacaaaaa tatcactctt
     8761 tgcaattgat gaggcgcact gcgtgtctca atgggggcac gatttcaggc cggaatatac
     8821 acagttttat atgctcaaag acctgtttcc gcacgttacc cgtgttgctc ttaccgctac
     8881 ggcagatgag cttacgcgtg atgacataat aaaaaatctg cacatggaaa actgcacggt
     8941 ttttatatca agctttgacc ggccaaacat caagtacagc ataaatatta aaaataaaga
     9001 aaaacagcag cttcttgatt ttataaaaaa agaacacccc gatgattcag gtatagtcta
     9061 ttgtatttca agaaaacgcg tggaaaattt tgcggaattt ttgcaaaacg aaggctttaa
     9121 agtttatccc taccatgcag gtttgagcaa agaagtgcga gagcgcaatc aggacagatt
     9181 tataaaagaa gacggcgtga ttatggtcgc cacaattgct tttggaatgg ggatagacaa
     9241 gcctgatgta aggtttgtct gccacatgga tttgccaaaa tcaatggaag cgtattatca
     9301 agaaacaggc cgcgcaggcc gtgacgggct ggattctgat gcatggcttg tgtacgggct
     9361 cggggatgtg gtgcagcttc gcagttttat aaacaattca aacgcacctg acgaacaaaa
     9421 aagaattgaa cacaaaaagc tcaattctct gcttgcttat gtggagactg ccgactgcag
     9481 aagaaaagtg cttcttgatt atttcaacga aaagtacgag gctccatgca acaactgcga
     9541 tacatgtatt catcatcctg aaacttatga tgctactgtt gaaattcaaa aaattctgtc
     9601 gtgtattttc agggtaaaca aaagtgcagg ccgttttggt tttggtgcgg cgcatattat
     9661 agatatttta cagggaaaag aaaccgataa aatattaaaa tttggccaca acaaactttc
     9721 cacttttgga atcggaaaag aaacagacgt ttttcaatgg cagtcaataa tcaggcagct
     9781 ggcggttatg gggtttgttg agatagaccc tgcacatctt acgatttctt tgacacctga
     9841 ggccaacgat gtgttgagag gtaaaaaaca cataagttta agaaaagatg tgctacgtgc
     9901 aaaagaaaag attaaaaaag aaaaaatcaa aaagctgcgg cttgatgaat tcagtgctga
     9961 ttacgatacg gatttgttca aaaggcttaa agaattgcgt cttgaatttg ccagagcggc
    10021 aaatttaccg ccttatgtaa tttttcacga caaaactctg cttgagatgg tttatacaaa
    10081 accaaaaact ctcgaagaca tggcagagat ttccggcgtg ggtgaacata aattgcaaaa
    10141 atacggcatt gcatttttaa aagtattaaa ctgttcgaga aaaaattcgt gataaggaac
    10201 gaagtgacgt gaacgaattt tttgagtgac aattgaaaag gtnnnnnnnn nnnnnnnnnn
    10261 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nntactttta aaaaagccaa
    10321 acatatggta gtattatctt agattagtat aaagaattaa ttatttttat atgaattgat
    10381 aaattttcag cactaataaa attagaccga atgcgcacaa agcgtattgg gttatgtgta
    10441 tatatagaaa aagaggtata ggacaatcga cacaatgact ttattaactg cacttttgat
    10501 aattgccctg attgccgctg ccggtgcagc ttttgtaatt tggcaaaaaa agaaaaccnn
    10561 gaaaaccgtg caggcacttt atgacaaact ttcaaaagaa agcacggaaa aagaaaatct
    10621 tttgaaaaaa gaagcaatga ttcaagcaaa agaagcattg cacgctgaac gtgaaaaatt
    10681 tgacgacgaa gtaagagaac gccgtcagga tttgcaaaga gcagaagata aactccttaa
    10741 aaaagaagat atgcttgaag ataaaattca agaagcttct gacaaggaat acgctgctca
    10801 aaagaaaatg gatgagctgc ttgaaaaaga agactatctc gctgatttga ttgcaaaaca
    10861 aatcgaagaa accgaaaaaa ttgcaggtat gtcccgtgaa gaagcacgcc atatgctgat
    10921 ggaacaatta aaacaggatc ttcagcagga gcagatgcag cttatcaaag aaaatgaagc
    10981 taaaatcaga gagtctgcaa aagaaatggc gcaggatatt ctctctacaa caatgcaaag
    11041 atgcgcaata gatcaggttg ttgaatcaac cgtatctgtt gttaaccttc cttctgacga
    11101 gatgaaaggc cgtattatcg gacgtgaggg ccgtaatatc agaacactgg aaactttaac
    11161 cggggttgac ctcattattg acgacacacc ggaagccgtt gttctttcaa gctttgaccn
    11221 ncgtgagatt gcaaaagttg cattggaaaa actcatctct gacggccgta tccaccctgt
    11281 aagaatcgaa gaaatggtgg aaaaagctca ggaagaaatt gaagaaaaaa ttaaaaaaga
    11341 aggtgaaaac gcagccgttg atatgggcgt tttgaatctt cataaagagt taatcaaaac
    11401 actcggccgt ttgtattaca gaacaagcta cggtcagaat gttttgaaac actcgcttga
    11461 ggtcggacac attgcaggca tgctggcagc agaattgggc gctaatgttc agattgcaaa
    11521 acgtgccgga cttttacatg acataggcaa ggccgtagac caaactcaag acggaacaca
    11581 tattgagctt ggtgttgagc ttgcccgtcg ttacggtgaa aaagaagaag ttgttcacgc
    11641 aatagaagca caccacgacg atgttacagc aaatacgatt gaagcagttc tggtaaaact
    11701 tgcggatgct atatcagccg gacgtcccgg ttcaagacgc gatactcttg aaatctacat
    11761 caaaagactc aaaaaaatcg aagagattgc ctcaagctat gaaggtatta aacagtcttt
    11821 tgcagtgcag gcgggccgtg aggttaggat tattgtccag cctgacatgt tcgatgatct
    11881 ggcaagcgca aagttagccc gtgatattgc taagcgtatt gaagaagaac tcgactatcc
    11941 gggtcaaatc agagttactg ttgtacgcga aatcagaact acagaaattg caaagtagcg
    12001 ttcaagacag atttgacctg tacacgcagg caaaacatga atgaactaat aaaagtacta
    12061 tttataggcg acatcgtagg acgccccggt agaaatatcg taaaagatta cctgggcgcc
    12121 cttggcgtga ataccgaaaa caacccttat gactttataa tcgccaatgt agaaaacgct
    12181 tctcacggat tcgggcttac tgaaaaaaat cataaagaac ttggcgaaat aggtataaat
    12241 tgttttacct cgggcaacca tatctgggat aaaaaagatg tttattctta cataaacgat
    12301 tctgacaggc tgatcaggcc gtggaattat cctaaaggta cttacggagt ggggcatcgt
    12361 atctttgatg ttaaaggtac aaaaattgcg gttatgaatt ttttgggccg cacttttatg
    12421 aaccctgttg actctccgtg ggagattatt gaaaaagaaa ttgaaaatat aaaacaagct
    12481 gccccgattg ttatagtgga ttttcatgca gaggcaacag ctgaaaaaat ctgttttggc
    12541 agattctgtt cagaacataa aatcagtgct gttcttggca cacataccca tnnatgtgca
    12601 gacagctgat gaaaagatta ttaatgatta cacggcttat atcacagacg caggtttttg
    12661 cggggcatac aattctgtga taggtatggg gtatgaaggc tctttaaaac gtttgatgac
    12721 gagtattccc gaacgttttg atatagatga ttctcccgtt gttgaactca atgccgtttc
    12781 aatgagcttt gatgctgttt ccgggcaagc acaaagcata gaaagaattc attttataaa
    12841 agattacagt gaggtaacag catgatgaaa ggatagaaag gtgaaagtcg atttacacat
    12901 tcacacaacc tattcagacg gtgtattctc gcctgaaaag attgtggata ctgctattga
    12961 cgcaggtttg gatgctatcg caattactga ccacgacaat gtcctggcgt atccgatagc
    13021 cctgaactat gcccaaaaaa tcgcagacag cggtggaaaa gctcttgaaa ttctccccgg
    13081 tgttgaaatc aatacgattt ataaagacat agaaattcat atcctcggtt attttatgaa
    13141 ccgtgatgat agcgattttc aggctatgtt gaagtcgcag caaaaggcac gtatcgagca
    13201 gacagaacag attctgcatc ttttaaacaa aaaagaaggc atacatgtga cttttgacaa
    13261 gctcaagagc cttgttgcag aaggcggtag tatcggccgt ccgcacattg ccaaagcaat
    13321 tactctggca ggcggtacaa caagcgtgat ggaagcgtac aacaaatata taaacaacga
    13381 ctcagaagtt tatgtacaga gaaaaacaat ttctccgcac gaagctattg aaatcatcta
    13441 tgatgcaggc ggaatacctg tttttgcaca cccttttgat gttgaagacg ctgaaaactt
    13501 aatcaaagag tttatgcatt acggcttaag aggggtcgaa gcttatcata gaaaacactc
    13561 accagctatg gttgagtatt attcttccat tgcagagaaa aacggtctga ttatcacagg
    13621 cggttctgat ttccacgcac cgaaccctaa caacggccag ataattatgg gcaaaaactt
    13681 tattccggaa tggatatacg acaagctgat gaaagagaaa aaacagctag atttggcaag
    13741 gtaagcaatt aatattgaag ctatccaaaa taataaaaaa acaggtcaga tgtataggcc
    13801 tgttttttta ttgtcttatt taaaagattg taaaaatcat atataatatt ttaaaaagaa
    13861 aaagacaagg ctcaaaatga aaaacaatat aaaaacgctc aaagcattta acatggtaga
    13921 aataatgatt gtggtatgct tgcttgtgac tacagttatt ctgtgtattc cgacaatatt
    13981 taacaactcg aaagaagcaa aaattatctc gggctggaaa aggatttacg cagaaatgca
    14041 gtcaaacttt gaggttttta atgttagcga tgctgatgtg attgaaaaaa tttgccgcag
    14101 caatgttgca caaaaggaac ctgaaatttt taaggtaata agcccttacc tgaacgttga
    14161 tttgagtaga aatccaaata ctttaaaatc ttatcactac aaatttaaaa acggttctca
    14221 aattccaatg cagtcaatgg tttttacaag gttcttttct tatcaggaaa acggcaatat
    14281 agtcggtttt aagtggctgg attgtgaatg cagcgaaaaa gtcccctgtg caacagtatt
    14341 gtttgatatg aacgggattg aaaagccaaa cagaatcggc agggatattt ttgggatata
    14401 catttacaaa aacaggatag aagcattcgg tgcagagttt acaaacgatt ctctggaacg
    14461 ctcatgcagc agtcattcaa acggaatgag ctgctctgag tattaccttc gaggcgggaa
    14521 gttttaatca ataaaacacc ttaaaaagtt caacgattac atacagtaat gcagagaata
    14581 agaaaacaat atttaaaatt gcaatttttt gattctcttt taagggtttt actaccatta
    14641 tgcaaaaagc caaaaatggc agcacaaacg ggagcagata ccggccctgg atttctatgt
    14701 attcaaactg attcttttgt gtccacgtgc aaaatattaa tacgcagatt gaaaaataat
    14761 ttagtgccgt caatacacca agcacggctt tttgataaaa cgtcgtttta ggatattctc
    14821 caactatcga ataaagcgtg ttggccaaaa tcattacaaa ataaagatga taaaaaattg
    14881 cgcaaaaata aatattaagc cacccgagca cacctatcat tttttctatc agagcaaaat
    14941 tccataaccc gggaatatat tgaagcgtta aggcagtaaa ttttacggga tgctctaata
    15001 tgtaaagcat atgagaggag aaatctgatc cgtttaaagg gcgaagaata gtcagagcaa
    15061 aaaggctcca caaaacagct gctgcaaaag gcaaaagaat tgtaaaacaa agggttttta
    15121 aatatggtgt ttcaaacttt tcttttggga taaacaggat aaaaagagtc atcaaaaaac
    15181 tctgctttgt caaagccagt gacaccgcaa gcaggctcaa taatgcaagt tgtttgttat
    15241 tgattttttg ttgagtatca aaagaatatt gaaaaatttt tgaaatatat aaaacagaaa
    15301 ctgaaatcaa aacagcatca gctgaaatag aagcacccag agaaaggctc atcgggcaca
    15361 aaagcaaaaa tacacacgcc cattttaaaa aaggaatcga ctttatgctg aaatacccga
    15421 gcagtgtata aaacaaaagt gttacaattt ttcctgcgag taacaacagc catatgtgct
    15481 gtgtgcacag ggaggctatt attatacctg tgctctgtgg aaaatacgaa acaggcgata
    15541 gccttgccat attggcataa tcaataaata cttttttgtt gttgtccagc ttgattgccg
    15601 atatttcttt gaatttttcg ggtgagtatt tgattcgctt tgcaaagaac aaatccattg
    15661 agtcactgtt tgtcgaagct tttaaaaatt ttaacaaatt ttcgggtaaa aagctgccaa
    15721 cgtttccgtt aactttttga ggaaaaaatt gtcctcttga tatcccgtac gctctgcata
    15781 aatgagccgt ctcatcaggt gattgaaaag gcggtatcaa aaataccatt aaaaatccga
    15841 aaaataatgc aaaaagtaca aagatttttt ccggatttaa tacttttgcc atacctagca
    15901 tccttaaagg ttactggtca gattctttgt cgtgtttaag cagtttttca aaatcagaag
    15961 gtttgataga ttggataaag cttctaaact cctgcgcttc ttcttcatct tttgcagcgt
    16021 cacaagacac agaaccgttt gccagcacat tggccgtaac aaatatcggt gcgtccactc
    16081 ttattgcaac agcaattgca tcagatgggc gtgcatctat ttctacttca ttaccttctt
    16141 tatcttttat gtagattatt gcgtaataag tctctttttc aacatcgttg atttcgacac
    16201 ggtcaattgt tccgcctgtt ttttcaacaa tagacgcaat caaatcgtgc gtcatcggac
    16261 ggctgacttc gatattttca attcttctta tgatagcact tgcttcagca gaacctatcc
    16321 agataggcag cgcttttctg ttgtccatat cgtgcaaaac aacaatcggc gagccggttc
    16381 ttgtatcaag tgctattccc attactttca tttctatcat attaatatta taagcacaaa
    16441 attaaaatta gacaaagaat gcgcccctat gatacattaa atatatgaaa tttttgataa
    16501 taaacggacc aaatattaac ttgcttggca cacgtgagcc tgaaatttac ggctcaatga
    16561 cgcttgatga catcaacaaa gatattgcaa aatgtgcaaa agagctgggt gttgaaacag
    16621 aaacctttca aagcaatatc gaaggtgaaa tagtggataa aattcagcaa gcaaaaggtg
    16681 tttttgacgg tattgtcatc aatcccgcgg catatactca taccagtgtt gcaataagag
    16741 atgcaatcag cgctgtgggt attaaagctg tagaagtcca catctcaaac atccatgcac
    16801 gtgaagagtt cagaaaaaat tctctcattg caccggtgtg tattggacaa attacaggtt
    16861 ttaaagccaa cagttacaaa ttggctttga gagctctggt tgacattgca aaaatttctt
    16921 aacatcaggg ttgaaaaatt aatgtctttg ttgctacaat attaacaaca taataactgg
    16981 ttgaccatta ataattaccc ccccccctaa actttggatt gtatctgaaa aatgaattat
    17041 caaattggaa ttaaattttt atttacaggc atctcattaa taattttgtc tttttgtgca
    17101 aacacagcag catttgcatc ggattatcaa tacaaaattc ttgaccccaa atataaccct
    17161 gatgcgcagc gtgttgtaga cggcgaattg cctcctgtgc aggaagttga accttatgag
    17221 tcttcaagtt ttgatctaaa aacatttatg gcaatatttg ccctaatagt ttttcctatg
    17281 ttttttatgt c
//
LOCUS       DABS01000198            4441 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_16079, whole genome shotgun sequence.
ACCESSION   DABS01000198 DABS01000000
VERSION     DABS01000198.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4441)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4441)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4441
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(1..1741)
                     /locus_tag="CPT85_09085"
                     /pseudo
     CDS             complement(1..1741)
                     /locus_tag="CPT85_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004268718.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     stop; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
     assembly_gap    211..212
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    1286..1287
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1776..2594)
                     /locus_tag="CPT85_09090"
     CDS             complement(1776..2594)
                     /locus_tag="CPT85_09090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004163421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase beta subunit"
                     /protein_id="DAB20749.1"
                     /translation="MNRLEKKMLDALIDLKENHHVVGVKAEFEAEGTRMEEALRLKEV
                     VTKAGLELTIKIGGCEAIKDLFDARIIGVNTIVAPMIETPYAMKKYVHATKFVFPEEE
                     WQDINFLVNIETITGFNNLDAMIKSPEFQDVSGVVLGRVDMTGSMGLSREDINTDEIF
                     DIANATAKAVSQNNKQFVIGGGVSAHSLPFFKRLPQGSLTRFETRKIIFDAQNAINDS
                     NAGKGILKAVGFELMWLRNKKEFYGMIFREDEARLELLEKRYKLAIEQAGGSSC"
     gene            complement(2685..4052)
                     /gene="glnA"
                     /locus_tag="CPT85_09095"
     CDS             complement(2685..4052)
                     /gene="glnA"
                     /locus_tag="CPT85_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015738418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="DAB20750.1"
                     /translation="MINYVPKQGKELSKEEIKKLIDENHVKFIRLQFVDINGMVKNMA
                     VPAKQIDKILNNELMLDGSSIKGFRSIETSDMYFYPDRSTFAILPWREKEGKWNVARI
                     ICDIHNADGTPFEGCPRCNLKRVIKEAEEMGFVMNIGPEAEFFLFKKDENGLPTTGTH
                     DSAGYYDVGPDDKGEDIRAQIVDTLEQLGFEIEASHHEVARGQHEVDFKYADALTAAD
                     NIVTFKYAVKASADRFGLHATFMPKPIYGINGSGMHCNISLFDIKKGKNAFFNEDSAF
                     QLSKEALYTIGAILENVKDFTAITNPTVNSYKRLVPGYEAPVYIAWSLANRSALIRVP
                     AKRGNATRVELRSPDASCNPYLVMAVLLTVAMEGIKNQIKPPLQTEENIYDMTAKERK
                     RNHIDSLPGSLNEALALMKKSKLVKKALGEHIFNEFVMAKEMEWDRYRTDVSPWELNE
                     YLEKY"
BASE COUNT         1258 a          898 c          757 g         1524 t
ORIGIN      
        1 ctcatcgcgt ggcaaaaacg gatacatgtc ttcaagcgaa ggagaaatca ttgttccgtc
       61 ttctagcttg cgtgaggaaa gttttggcgt aaatatataa tcaggattca ctatcacatc
      121 gcacaaaaca gggcccttag cagacaaaac attttttatc gtattatcaa tttcatgagg
      181 ggactccagc ctgattgact ttatatcaaa nnacaaagtc aggtatgctc acgccactgt
      241 ttgttcctgc tccggtattt cggccttcaa aaaagtttgt ttgtgtttgt ttgattgagc
      301 tatagccatc gttattcaaa ataaaaatct taaccggcag attgtggtgt tttaatgttt
      361 ggagctcttg aagattcatc atcaaagatc catcaccggc aatacatatt gtattttttt
      421 tgttgtttgc aacacatgca cctattgctg ccggcaaatc ataacccatt gaagcgtctc
      481 cggaattcga gaatattctc tgattgttct tgaccatcgc tgtttgcacg cttgcaatta
      541 tagctgtgcc attggcagtg acgcaaacat cattttcaga cattagctct gtaagacgcc
      601 ttacaaaata ataaacatta attttatctc ctgtttgtga atattctttt gtattaccaa
      661 aagaatacct ttcttttaaa tcccggcaaa atgtaagcca ttgtggttta tcaatagagg
      721 ttaaagattc tttaagcaaa ggtaaaaaat cagcgaggtc tgcatgtatt gccatatcgg
      781 gctttacaag aggtttttca agttcagctt tgtcgatgtc aacgacaatt ttatatgcat
      841 ttctagcaaa gttttcccaa ttatagctta tttgtcttat attgtttctt gttcctaaaa
      901 agagcaccaa atctgcattt tgaagtgcaa aattgcctgc tctctggccg attgtaccga
      961 tacggccaat atattgagga gtatcctcgt tcaacaaatc aaaaccgtta aaggttgtta
     1021 caacagggat gtttaaattt ttaagtatat ctaaaaaggt atgtttcatg cctgaaagcc
     1081 taataccatg gccggcaaca ataagaggag tttttgcaag ggaaagacgg ctcaaaactt
     1141 ctgtgatttt gcaatcttcc tttgtcgagg gaggtttgca ggatatatca aaatctatta
     1201 attcctgttc atctatcaca gccgcttgaa catcaatagg aatatccagc cacacagggc
     1261 cttttcttcc tgtagttgct tcatanntaa cagccctatc cagatgatat ttaatttcga
     1321 gtggattttt aaccattaca gcatattttg ttaaaggttt tacaacgctt attatgtcag
     1381 cttcttgatc tcccagctgc ctgagattta aatcaggaca agaagcaagg gttgtagctc
     1441 gttttacctg accggagata tataaaacag gcacagaatc tgtccattgg ccaaagactc
     1501 cgtttaaaca attcaaacct ccggggcctg ttgtaacatt tactacagcc agtttagagc
     1561 tggcttttgc gtacccctca gctgcaattg cacaggcttg ttcattatgg ttacaaatat
     1621 aaggaatata tttgccaaaa ctgtcattga ggtgcattgc tccaccgcct gataccataa
     1681 acacattttt tatgtcatag atatttttta gccttgatgc aatataatca gaaactttta
     1741 tttttgccat tattttcccc gcagataatc actcactagc aagaagaccc gccggcttgt
     1801 tcaattgcca gtttataacg tttttcaagc agctctagtc tagcttcgtc ttctctaaaa
     1861 atcattccgt aaaattcttt tttatttctc aaccacatta attcaaaccc gacagctttt
     1921 aaaataccct tgcctgcatt tgaatcattt attgcattct gtgcatcaaa aatgattttt
     1981 cttgtttcaa aacgagtaag gctgccttga ggcaagcgtt taaaaaacgg taaggaatgc
     2041 gcagaaacgc ccccgccaat aacaaactgt ttgttgtttt gtgaaacagc ttttgctgtt
     2101 gcatttgcaa tatcaaaaat ctcatccgta tttatatctt cacgagaaag ccccattgaa
     2161 cctgtcatat ctacacggcc aagcacaact ccggaaacat cttgaaattc cggtgatttt
     2221 atcattgcat caagattgtt gaaccctgtg atggtttcta tgttcacaag aaaattgata
     2281 tcttgccact cttcttccgg gaatacaaat tttgttgcgt gaacatattt tttcattgca
     2341 taaggagttt ctatcattgg tgcaactatg gtgttaacac cgatgattct tgcatcaaac
     2401 aaatctttta ttgcttcgca gccgccaatt ttgattgtca gttcaagccc tgcttttgtt
     2461 accacttctt ttaaacgcag agcctcttcc atccttgtac cttctgcttc aaactctgct
     2521 ttaaccccca ccacgtgatg attctctttt aaatcaatca acgcgtccaa catttttttc
     2581 tcaagtctgt tcattgttta ccctttatat tttacaaata ttatattaca aaaagccttc
     2641 ttaaaaataa taagaaggct tctttgttta aaaataaaga atttttaata tttttccaga
     2701 tattcgttaa gctcccatgg cgaaacatct gttctgtatc tgtcccactc catttctttg
     2761 gccataacaa actcgttaaa gatatgttcg ccaagagctt ttttaacaag cttgcttttt
     2821 ttcatcaaag ccaacgcttc gtttaaactg cctggcaaag aatcaatgtg gtttcttttt
     2881 ctttcttttg ctgtcatatc atagatgttt tcttctgttt gaagcggcgg cttaatctgg
     2941 tttttaatac cttccatagc aaccgtgagc aatacagcca taacaaggta cgggttgcac
     3001 gatgcatccg gtgagcgcag ctcaacacgg gtagcattac ctctttttgc aggaaccctg
     3061 attaatgcac ttctgttagc aagcgaccat gcaatataaa caggagcctc atatccagga
     3121 acaagacgtt tgtagctgtt aacagtcggg tttgtaatag ctgtaaaatc ttttacattt
     3181 tcaaggattg caccgattgt ataaagagcc tccttagaca actggaatgc agaatcctcg
     3241 ttaaagaatg catttttgcc ttttttaata tcaaaaagcg aaatgttgca atgcataccg
     3301 gaaccgttaa taccatagat gggtttgggc ataaatgttg catgaagtcc aaatctgtca
     3361 gcagaagctt taactgcata tttgaatgta acgatattat ccgcagcagt aagagcatca
     3421 gcatatttaa aatctacttc gtgctgtcct cttgctactt cgtggtggct cgcttcgatt
     3481 tcaaaaccaa gctgttccaa tgtgtcaact atttgagcac gaatatcctc gcccttgtca
     3541 tcaggaccta cgtcgtaata accggcagag tcgtgtgtgc ccgtagttgg caagccgttt
     3601 tcatcttttt tgaaaaggaa aaattctgcc tcagggccga tattcataac aaagcccatt
     3661 tcttcggctt cttttataac tctttttaag ttgcatctgg gacagccttc aaaaggtgtg
     3721 ccgtctgcat tatggatatc acagataatt cttgctacgt tccattttcc ttctttttct
     3781 ctccagggaa gaatagcaaa cgtagaacgg tcgggataaa aatacatatc agatgtttca
     3841 atgcttctga aacctttaat agaggaaccg tccagcataa gttcattgtt caaaatttta
     3901 tcaatttgtt ttgcaggaac agccatattt ttgaccatac cgtttatgtc aacaaactga
     3961 agacgaataa attttacgtg gttttcgtca atcagctttt ttatctcttc tttagagagc
     4021 tcttttccct gtttcggaac gtagttaatc atttgttctc ctttttcata caccgttctt
     4081 tttacaagtt taattatgat attatttatg ctttagtgca acagtttttt gttttcgggg
     4141 gttattaaga tattttacac aatagttttt cgctgaattt tgcttttaga taacaaaccc
     4201 tgtttatttt tattctcata ttgtaaaaat ttttgatacc aaattgagat tttttttata
     4261 acaatgcaaa agttatttta aaaatttttt gtttaatgaa agttaacaat atttttcatc
     4321 agatacagtg tccgttcaga gtcttttatc tgctcttttg caagtattgc aaaagagttt
     4381 gagaaatatt tctcaaagct ttcaatatca tattgctcaa agatgtcttc tcttgtggaa
     4441 a
//
LOCUS       DABS01000199            3952 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_17316, whole genome shotgun sequence.
ACCESSION   DABS01000199 DABS01000000
VERSION     DABS01000199.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3952)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3952)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3952
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..1293)
                     /locus_tag="CPT85_09100"
     CDS             complement(<1..1293)
                     /locus_tag="CPT85_09100"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20732.1"
                     /translation="MTKCSDIKTNFTGVDFSKYSSKVSEFVNEFSKRANQKGQFLNWV
                     NLPQEQLKRVDEIYSLADKLKAQTGAQKLSVMGIGGSKHTVEHMLSINGLNVKGDAVE
                     FYSDVDSASLERFLYRLGNDVTKSNFMIASKSGSTFETKDGFLRVLAMLEDAYKAQGK
                     TEDEAKKAANKHFIAVTDGNAEKSELRRTSNENNWLGDLFIHDDVGGRFSAFDDHALF
                     TLAFAGMKKEDMKAMLEAAQNMSELSLTADLDSNDALKEGIFWADAKLNGICASVHQY
                     MGAIFENTVYWHAQMQNESVKDTLKQVAKVPDAMHHSAEAHFNPANKLVFALTVPVDN
                     GVCKENAEAYIGALSKSYEVTGATFVENIETKGMGLTPCAAGAMTQLRAFATVYQEIV
                     EKVMTNTAFPEVLDSVLQPHVEFYKKNLKGGVVVPGRIS"
     gene            complement(1333..1536)
                     /locus_tag="CPT85_09105"
     CDS             complement(1333..1536)
                     /locus_tag="CPT85_09105"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20733.1"
                     /translation="MFQVYTQKRGADLTKTLIKDFKDLEEAFDCAQKAIEGKPDLKYI
                     IEETSGHFNSYGELLVDVVAESD"
     gene            1595..2638
                     /locus_tag="CPT85_09110"
     CDS             1595..2638
                     /locus_tag="CPT85_09110"
                     /inference="COORDINATES: protein motif:HMM:PF00482.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20734.1"
                     /translation="MFEKMYNYFIVKELTLSDKKQLFTTIYSLYAAGFSYTEIFKTIE
                     TSVKNKSLVMTAFLLRNGIEKGTPIRDLIMRYKKVIGVQYAMLFCAGDKAGKLEDALK
                     NILKDIERALNLRSSLIASLTYPVLLFFMAIGVLMFCHFFFFKIFENMMTGMCPSQIM
                     GLLISAVTKIIIVYAVILFSIVYVVKHKNLFKSVMDFITEKTFLSGLVNSIYYSGFFS
                     VLAASYEAGMPIIEAVETASDIFRTKRAQQGMQKTTIALKNGTDATSAFLTSMIFDNY
                     VMSMIATGEKAGRLGKTFENVSAFYEKNVQDKINTIMSLVQPVSIVVIGLLVGYIAVM
                     FYAKLYGGIIKGF"
     gene            2648..2983
                     /locus_tag="CPT85_09115"
     CDS             2648..2983
                     /locus_tag="CPT85_09115"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20735.1"
                     /translation="MLKRIFILITLFFISNTGVLYASETDLQSIEAQIEKEQTIQSQI
                     NDIGSKLLNANKIDKRIVFVYDENAKESFLKIDPSVTSRQVVVXFMAAHTNLFKTMMS
                     LLAFWQEEF"
     assembly_gap    2909..2910
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2965..3372
                     /locus_tag="CPT85_09120"
     CDS             2965..3372
                     /locus_tag="CPT85_09120"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20736.1"
                     /translation="MARGILTALKSYDGYFNGYLSALQIKAAPKKFEIVADKRAVDYM
                     VNAGYDPIGLITFIQKSCPQKRFDKISNKNLASKRLAIIYEYIYTKYPYFLVNNKYFE
                     NEHYQNFLLNSQNNRRMLLEKIKTGSKEELKYE"
     gene            3365..3946
                     /locus_tag="CPT85_09125"
     CDS             3365..3946
                     /locus_tag="CPT85_09125"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20737.1"
                     /translation="MNSKIAITTAVLSILITLSPVCNATDTLQDEIVESVLKNKIVES
                     PYKQYHYNYEDTKRIPVQLSVIADIDSEKDIVEGQTVIFRVKNNVYQNGKKIIKKNDL
                     VHSRVETIIKSGMNGIPASIIFGDFQFENLDSAKFSDTYEKYGQDRSLWVFPLKWALT
                     PLPPTGSLTNFIKGGHAKLKEKEEITIYYHPNW"
BASE COUNT         1318 a          701 c          685 g         1246 t
ORIGIN      
        1 tgaaattcta ccaggaacaa ctactccgcc ttttaaattc tttttgtaga attcaacgtg
       61 cggctgcaat acactgtcta aaacttcggg aaatgctgta tttgtcataa ctttttcaac
      121 aatttcctga tacacagtag caaatgctct caattgagtc attgcacctg ctgcacacgg
      181 agtcaggccc ataccttttg tttcaatatt ttcaacaaat gtagcacctg tcacctcgta
      241 agattttgac aatgcaccga tataagcttc ggcattttcc ttgcaaacac cgttgtcaac
      301 aggaactgtc aatgcaaaaa caagtttgtt tgcagggtta aagtgagctt ctgcactgtg
      361 gtgcatagcg tcaggcactt ttgcaacctg ttttaatgta tctttaacag attcattttg
      421 catttgagcg tgccagtaaa cagtgttttc aaaaatagca cccatatact ggtgaacaga
      481 agcacagata ccgttgagtt ttgcatctgc ccagaagata ccttctttta aagcgtcatt
      541 tgagtccaaa tcagcagtta aagaaagctc tgacatgttt tgagcagctt cgagcattgc
      601 tttcatatct tcttttttca tacctgcaaa tgcaagtgtg aacaatgcgt ggtcatcaaa
      661 agcagaaaat cttccgccga catcatcgtg aataaacaaa tcaccgagcc agttattttc
      721 gtttgaagtt cttcttaatt cgcttttttc tgcattaccg tcagttacgg caataaagtg
      781 tttgttcgct gcttttttag cttcgtcttc tgttttaccc tgtgctttgt atgcatcttc
      841 gagcattgca agtactctta aaaaaccgtc ttttgtttca aatgtagagc ctgattttga
      901 tgcaatcata aagttagatt ttgtaacatc atttccgagt ctgtagagga atctttcaag
      961 acttgcagag tctacatcgg aataaaactc aacagcgtcg ccttttacat taaggccgtt
     1021 tatagacagc atatgttcaa cagtgtgttt tgaaccgccg atacccataa cgctcagttt
     1081 ttgagcacct gtctgcgctt ttaatttatc agcaaggctg tagatttcat caactctttt
     1141 taattgttcc tgaggaaggt taacccagtt taaaaactgt cctttttgat ttgctctttt
     1201 tgaaaattca ttcacaaatt cagaaacttt tgatgagtat tttgaaaaat caacacccgt
     1261 aaaatttgtt ttaatgtctg aacattttgt catcacaaca tttctcctta taaaaatgta
     1321 ctacttttaa agctaatcac tttcggcaac aacatcaacg agcaattcgc cgtagctgtt
     1381 aaagtggccg gaagtttctt caattatgta ttttaagtca ggtttgcctt caatggcttt
     1441 ttgggcgcaa tcaaaagctt cttccagatc tttaaaatct tttatcagag ttttggtcaa
     1501 atcagcccct cttttttgag tataaacttg aaacataaga tactcccttt cttttttcta
     1561 tttctataat actacagaaa aaaaagtatg aattttgttt gaaaaaatgt ataattattt
     1621 tattgtgaaa gaattaaccc tgtctgacaa aaaacaatta ttcactacca tatacagcct
     1681 gtatgcggca ggattttctt atacggagat ttttaaaaca atagaaactt ccgtaaaaaa
     1741 taaatctctt gtaatgacag catttttatt aagaaacgga atagaaaaag gcacaccgat
     1801 aagagacctt attatgcgtt ataaaaaagt aataggtgtg caatatgcaa tgctgttttg
     1861 tgcgggagat aaagccggaa agctcgaaga tgctttaaaa aacatcctca aagatatcga
     1921 gcgtgccctc aatttgagaa gctcactcat tgcctcttta acatatccgg tgctattgtt
     1981 ctttatggca ataggggttt tgatgttttg ccatttcttt ttctttaaga tttttgaaaa
     2041 catgatgaca ggaatgtgtc cttcgcagat aatggggttg ttgataagtg ctgttacaaa
     2101 gataataatt gtttatgcgg ttattttatt ttcaatagtt tatgttgtaa aacacaaaaa
     2161 cttatttaaa agcgttatgg attttattac agaaaagact tttttgtccg gtcttgtcaa
     2221 cagtatttat tactcaggat ttttttcagt actggcagca tcgtatgagg caggtatgcc
     2281 gataatagag gctgtagaaa cagcttcaga catattcaga acaaaacgcg cacaacaggg
     2341 aatgcaaaaa acaactattg cattaaaaaa cggtacagat gcaacatctg catttcttac
     2401 atctatgatt tttgacaact atgttatgtc aatgattgca acaggagaaa aagcaggcag
     2461 gctgggcaaa acatttgaaa atgtttcagc cttttacgaa aaaaatgttc aggataaaat
     2521 taataccata atgagtcttg tacaacctgt gtctattgtt gtaataggac ttttggtagg
     2581 atatatagct gttatgttct acgcaaagct ctatggtgga ataataaaag gattttagga
     2641 aagtgttatg ttaaaaagaa tatttatatt aattacgtta ttttttattt caaataccgg
     2701 tgtgttatat gcatcggaaa ctgatttgca atcaattgaa gcacaaattg aaaaagaaca
     2761 gacaattcaa tcacaaataa atgatattgg ttcaaagctg ctaaatgcaa acaagataga
     2821 taaaagaata gtctttgttt acgacgagaa tgcaaaagaa tcgttcttaa aaatagatcc
     2881 ttctgttaca agcagacagg tcgttgttnn gtttatggca gcgcatacaa atttgttcaa
     2941 aacgatgatg agcttgctgg ctttttggca agaggaattt taaccgcatt aaaatcttat
     3001 gacgggtatt ttaacggtta tttgagcgca ctgcagataa aagcagcccc gaaaaaattt
     3061 gaaattgttg cagacaaaag agccgttgat tatatggtaa atgcaggata tgaccccatc
     3121 gggcttataa cttttataca aaaaagctgc cctcaaaaaa gatttgacaa aatttccaac
     3181 aaaaatcttg cctctaaaag attggcaata atttatgaat acatttatac aaaatacccg
     3241 tattttcttg tcaacaacaa gtattttgaa aacgaacatt accagaattt tcttttaaac
     3301 tctcaaaaca acagaagaat gctgcttgaa aaaattaaaa caggttcaaa ggaagagtta
     3361 aaatatgaat agtaaaattg caataacaac agctgtttta tctatactga ttacactttc
     3421 acctgtttgt aacgcaacag atacactgca agatgaaata gttgaatcag tacttaaaaa
     3481 taaaattgta gaatctccct acaaacaata ccattacaac tacgaagaca caaagcgcat
     3541 acccgtgcaa ttgtctgtca ttgcagatat tgattccgaa aaagatatag ttgaaggcca
     3601 gactgtcata tttagagtaa aaaacaatgt gtatcaaaac ggaaaaaaaa ttatcaaaaa
     3661 aaatgacctt gtgcactcca gagtcgaaac cattataaaa agcgggatga acggcatacc
     3721 tgcaagtatt attttcggag attttcagtt tgaaaatctg gacagtgcaa aattcagtga
     3781 tacttacgaa aaatacggac aggacagaag tctctgggtg tttcctttaa aatgggcgct
     3841 cacaccgctt ccaccaacag gctcgttaac aaatttcata aaaggcggac acgctaagct
     3901 caaagaaaaa gaagaaatca ctatatatta ccatccaaac tggtaaaagc ta
//
LOCUS       DABS01000200            9544 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_2264, whole genome shotgun sequence.
ACCESSION   DABS01000200 DABS01000000
VERSION     DABS01000200.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 9544)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 9544)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9544
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(4..237)
                     /locus_tag="CPT85_09130"
     CDS             complement(4..237)
                     /locus_tag="CPT85_09130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="DAB20713.1"
                     /translation="MSTVLERVKKVVVDQLSVDENLVTPEASFTADLGADSLDTVELV
                     MAFEEEFGCEIPDEEAEKIATVQDAVNYIESHS"
     gene            complement(445..1176)
                     /gene="fabG"
                     /locus_tag="CPT85_09135"
     CDS             complement(445..1176)
                     /gene="fabG"
                     /locus_tag="CPT85_09135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003181704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="DAB20714.1"
                     /translation="MSEKKVALITGGSRGIGLACALELAKAGCDIIINDICDAEKAQP
                     AIDEIKNLGVNAYFYQFDVSNDEQVQAAVDKMISEHGKIDILLNNAGITKDGLFIRMD
                     MEQWERVIKINLTSAYCVTHAVVKYMMKARQGSIINMSSIVGRHGNAGQANYSASKAG
                     LIGLTQTLAKELGSRNIRVNAVCPGFIQTAMTAELANLDEYLKAIPMKRLGTPEDIAK
                     VVKFLALDTDYVTGQAIEVAGGLMI"
     gene            complement(1231..2163)
                     /gene="fabD"
                     /locus_tag="CPT85_09140"
     CDS             complement(1231..2163)
                     /gene="fabD"
                     /locus_tag="CPT85_09140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010282518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[acyl-carrier-protein] S-malonyltransferase"
                     /protein_id="DAB20715.1"
                     /translation="MGKVAFVFPGQGSQSVGMGKSLYEASVVAKEIFDKADEVLGRSI
                     SKMCFEGPEEDLKQTINTQPAILVTSIAALEALKEKTDVKPDYVAGHSLGEYGAYYAA
                     GVIDFSTAMKLIDKRAKEMNAAAESTKGAMTAVIGMSKEAILDTIEKIDGMVSVANYN
                     SPSQIVITGEADAVAKANDALKDAGAKRVIPLPVSGGFHSMLMEEASVKFSEILDDCD
                     IKDAQIPVFTNVDAEPTTAAIRFKAKMTAQIYSSVMWTQTIEKMAADGVDTIVEIGPG
                     KVLAGLVKKTNPAINVLNVFDEESLKAAVEALKK"
     gene            complement(2182..3174)
                     /locus_tag="CPT85_09145"
     CDS             complement(2182..3174)
                     /locus_tag="CPT85_09145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013275855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP synthase"
                     /protein_id="DAB20718.1"
                     /translation="MIAGVGYGVPDTVITNDDLTKLVDTSDEWITTRTGIKERRVVSG
                     EENAVTLGIKAAKNALEKAKMDAKDVDMIIAAASVPAHPYPSTACEIQAAIGADKAAA
                     FDITAACTGMIYAMNIAKAFISSGIYKNILLVATDANSKFIDWYDRTSCVLFGDGAGA
                     FVLKESVDGVDDIIAMDMHSNGKDGDFIKMPMNGENCPLVEPCEQKKQKIVMNGREVY
                     KFVVTTMPESISNCLEKAGLTPDDVDYLIPHQANYRIIEAMASRLNYGDEKIIVNLQK
                     YGNTSAASIPLAMAEGIEEGKIKLPCKXCKAILSGFGAGLTWGTVIVRLREGIA"
     assembly_gap    2264..2265
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3204..4256)
                     /locus_tag="CPT85_09150"
     CDS             complement(3204..4256)
                     /locus_tag="CPT85_09150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019851043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate--acyl-ACP acyltransferase"
                     /protein_id="DAB20716.1"
                     /translation="MTRIAIDAMGGDHAPHEIVKGALWAADEYNVAIELVGKEDEIKK
                     VIDEVKRDGIRTSNINSPKGRIRVDVDKLDIKITPASEVIEMGEAPGQAIRKKKDSSI
                     VLAVKAVATGSSQAVVAAGSTGAAMASSLFGLGRLPGIERPAIATTLPTMKTPVVLID
                     AGANSNCTAEMLYQFAIMGSAFSKNVLGMENPRIGVLNIGEEAGKGNELAQAAYKLLE
                     ENKDGLNFVGNVEGKEIFLGDCDVVVCDGFVGNVALKSIEGASSMLFKMIMQEFKRDP
                     ISMIIGLLAKSAMKRIFKRINYEEFGGALLLGVKGITVISHGRSMAYAIKNAVRVAKE
                     AVESDVNKKISEFYEG"
     gene            4342..4557
                     /locus_tag="CPT85_09155"
                     /pseudo
     CDS             4342..4557
                     /locus_tag="CPT85_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010043250.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing start; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4549..4719)
                     /locus_tag="CPT85_09160"
                     /pseudo
     CDS             complement(4549..4719)
                     /locus_tag="CPT85_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019469283.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing stop; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
     gene            complement(4722..5237)
                     /locus_tag="CPT85_09165"
     CDS             complement(4722..5237)
                     /locus_tag="CPT85_09165"
                     /inference="COORDINATES: protein motif:HMM:PF02620.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20717.1"
                     /translation="MKISIDDIKNAKDQSLKICFDNTVKDLSTEGAVVAELVLKAYGK
                     YINVQGTIVANVKLVCDRCLKDFVKKMKVDVDETYLLGHLIANEDAHSGQELELKDGD
                     FVTELTGTDEVDIDDLIYQSVTLNIPNPCVCDINCNGDAEMEKYMKKEISDPRLEVFK
                     NLKINKLEEGK"
     gene            complement(5331..5561)
                     /locus_tag="CPT85_09170"
                     /pseudo
     CDS             complement(5331..5561)
                     /locus_tag="CPT85_09170"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5492..9544)
                     /locus_tag="CPT85_09175"
                     /pseudo
     CDS             complement(5492..9544)
                     /locus_tag="CPT85_09175"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; incomplete; missing
                     start; Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    5507..5526
                     /estimated_length=20
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         2713 a         2051 c         1560 g         3198 t
ORIGIN      
        1 aaactatgaa tgagattcaa tatagtttac tgcatcttga actgtagcga ttttttcagc
       61 ttcttcatca ggaatttcgc aaccgaattc ttcttcaaaa gccataacca attcaactgt
      121 atccaaagaa tcagcaccca aatcagctgt gaagcttgct tcaggagtaa ctaaattttc
      181 gtctacgctt aattgatcaa ctacaacttt ttttactctc tcaagaactg tactcatgtt
      241 ttttcatcct cattttgatt aactacgtat tttcattact attatactat ttcaatataa
      301 atatgcaatt ttgtaaagcg ttagtatcga gttttaaaga ttatttacaa ataatttaga
      361 acatattttg ccctaaaaaa ttaaacaaaa ggctttccat ttataaagaa agccttttgt
      421 ttaaaataat ttgtatgatc ctaattatat catcaaaccg ccggcaactt cgatagcctg
      481 acctgtaaca tagtctgtat caagagccaa gaatttaaca actttagcaa tatcttcagg
      541 tgtaccaagt cttttcatag gaatagcttt taagtattca tcgaggttag ccaattctgc
      601 agtcattgct gtttgaataa atccaggaca tactgcattt actctgatat ttcttgagcc
      661 taattcttta gctaacgttt gagttaaacc gataagacca gcttttgatg ctgaataatt
      721 agcttgaccg gcattaccgt ggcggcctac aatacttgac atgttgataa tagaaccctg
      781 acgagctttc atcatgtact taacaacagc atgagttaca caataagcac ttgttaagtt
      841 gattttaata actctttccc attgttccat atccattctt ataaacaagc cgtcttttgt
      901 gatacctgca ttgttcaaaa gaatgtcaat tttaccatgt tcagatatca ttttatcaac
      961 tgcagcctga acttgttcgt catttgaaac atcaaattga tagaaatatg cattaacacc
     1021 caaatttttg atttcatcga tagccggttg agctttttct gcatcacaaa tatcattgat
     1081 aatgatgtca catcctgctt ttgcaagttc taatgcgcaa gccaaaccta taccccttga
     1141 gccacccgta attaatgcaa cttttttttc tgacataatt ttctccttaa tgttaattct
     1201 tatcgttctt atcgtttaat ttgagttttg ttattttttt aaagcttcaa ctgccgcttt
     1261 taatgattct tcgtcaaaaa cattcagcac attgattgca ggatttgtct tttttacaag
     1321 accggcaaga actttgccgg ggccgatttc tacaattgta tcaacaccat ctgctgccat
     1381 tttttctata gtttgtgtcc acattacaga agaataaatc tgagctgtca ttttagcctt
     1441 gaatcttatt gccgctgttg tgggctctgc atcaacattt gtaaaaacag gaatctgtgc
     1501 gtctttaata tcacagtcat ctaatatttc agagaattta acacttgctt cttccataag
     1561 cattgaatga aaaccgcctg aaacaggaag aggaataact ctttttgctc cggcatcttt
     1621 taaagcatca ttggcttttg ctacggcatc agcctcacct gtaataacga tttgtgaggg
     1681 agagttgtaa tttgcaacag acaccatacc atcaattttt tcaatagtat caaggatagc
     1741 ttcctttgac atgccgatta cagcagtcat tgcacctttt gtagattctg cagcagcatt
     1801 catttcttta gcacgtttgt caatgagttt cattgctgtt gaaaaatcta taacacctgc
     1861 tgcataatat gcaccgtatt ctcccaacga gtgacctgct acataatcag gttttacatc
     1921 tgttttttct ttcaaagctt ccaatgccgc tattgatgtc acaagaatag ccggctgagt
     1981 attgattgtt tgtttcaaat cttcttcagg accttcaaaa cacattttgg aaatacttct
     2041 gcccaaaact tcatcagcct tgtcaaaaat ttcttttgcc acaacagaag cttcgtataa
     2101 tgatttaccc attccaacag attgtgagcc ctgtccgggg aatacaaacg caactttacc
     2161 catattattt ctccttaata tctatgcaat accttcacgt aatcttacaa taaccgtgcc
     2221 ccaagtaagt cctgcaccaa aaccgctcaa gatagcttta cagnntttac aaggaagctt
     2281 gattttacct tcttcaatgc cttctgccat tgcaagagga atagaagcag ctgatgtatt
     2341 gccatatttt tgaaggttaa caataatttt ttcatcaccg tagtttaatc ttgaagccat
     2401 cgcctcaata attctgtagt ttgcctgatg aggtattaaa tagtcaacat catcaggagt
     2461 aagacctgct ttttcaagac aattacttat agattcaggc attgttgtaa caacaaattt
     2521 gtatacctct ctgccgttca tcacaatttt ttgtttcttt tgctcacagg gttccacaag
     2581 cgggcaattt tcgccattca tcggcatttt tatgaaatca ccgtctttac cgtttgagtg
     2641 catatccatt gcaataatgt catcaacacc gtctacagat tcttttagaa caaatgcgcc
     2701 ggcgccatcg ccaaataaca cacagcttgt tctgtcatac caatctataa attttgagtt
     2761 tgcatctgtt gcaaccaaaa gaatattttt ataaatacct gaagagataa acgcttttgc
     2821 aatattcatt gcataaatca ttcctgtaca agcagcggtg atatcaaaag cagctgcttt
     2881 gtcagcacct attgcagctt gtatttcaca agcagtagaa ggataaggat gggcaggaac
     2941 agatgctgcg gcaataatca tatcaacatc ttttgcatcc atttttgcct tttccaaagc
     3001 attttttgca gctttaatac cgagagtaac agcgttttct tcacctgaaa caactcgtct
     3061 ttcttttata cctgttcttg ttgtaatcca ttcatcactg gtatcaacga gttttgttaa
     3121 atcatcgttt gttattaccg tatcaggtac accgtatccc acgcctgcaa tcataacagg
     3181 aattaaattt aatgacatag attctatcct tcgtaaaatt ctgatatttt cttattaaca
     3241 tctgattcaa cagcttcttt tgccactctg acagcatttt ttattgcata agccatgctt
     3301 ctgccgtgag agataacagt gatgccttta acacccaaaa gcaaagcacc gccgaattct
     3361 tcatagttaa ttcttttaaa aattcttttc attgctgatt ttgcaagcaa accaataatc
     3421 atagaaatag ggtctctttt aaactcttgc attatcatct tgaacagcat tgaagacgca
     3481 ccctcaatac tctttaacgc aacgttaccg acaaacccgt cgcaaacaac aacatcgcaa
     3541 tcaccgagaa aaatttcttt accttcaacg ttgccaacaa aatttaaacc gtctttattt
     3601 tcttccagca gcttgtatgc agcctgagca agctcattgc ctttgccagc ctcttctccg
     3661 atattcaaaa caccaattct gggattttcc ataccgagta cattttttga aaaagcagag
     3721 cccataatag caaactgata aagcatctct gcagtacaat tgctgtttgc acctgcatca
     3781 attaaaacaa caggtgtctt cattgtaggc aaagttgtag caatagccgg tctttctata
     3841 cccggtaatc tgccgaggcc aaataagctt gacgccatag ctgcgcctgt agaaccggcg
     3901 gcaacaacag cctgtgagct gccagtagca accgctttaa ctgcaagaac aatagaagaa
     3961 tcttttttct ttcttattgc ctggccgggg gcttcgccca tttctataac ttcggaagca
     4021 ggagtaatct tgatatcaag tttatcaaca tcaactctga ttcttccctt gggagaattg
     4081 atattactag tcctgatacc gtcacgtttg acttcatcaa taactttttt aatttcgtct
     4141 tcttttccga caagctcaat tgcgacgtta tattcatccg cagcccacaa agcacctttt
     4201 acaatctcgt gaggagcatg gtcgccgccc attgcatcaa tagctatcct tgtcatacta
     4261 aaactcttct cccttataaa ctttaaatcc aaacacgggg ttaatttatt ttatgcgccg
     4321 atttaagagt aaccggcgca ttataaattc ttattcttca gaagattttt cttcagcttc
     4381 ttgagcagga gcttctgctt caacttcagt tttaacttct tcagttgttt cttcaacttt
     4441 tacttcttca acaactgctt cttctttttt agcttttttt gcaggagctt ttttagcctt
     4501 aggagctttt tttgcttctt ctttaacttc ttcaacaaag ccttctgctt ttcttgaaac
     4561 tactttacct ttatattgac cgcaagctgt gcaaacagtg tgagtcaaaa ctaattcgcc
     4621 gcaatttggg caagttgtag tttcgggaac tgttgctttc cagtttgatc ttctgtgtcc
     4681 ttgtgctgat gcacctgttc ttttctttgg tactgccatt gttattttcc ttcttctagt
     4741 ttattaatct ttaaattttt aaaaacttcc aaacgaggat ctgaaatttc ttttttcata
     4801 tatttttcca tttcagcatc tccattacaa tttatatcac aaacacacgg atttggaatg
     4861 tttaatgtta cagattgata aattaaatca tcaatatcaa cttcgtcagt ccctgttaac
     4921 tctgtgacaa aatcgccgtc tttcagctca agctcttgcc cggaatgcgc gtcttcatta
     4981 gctataagat gcccgagcaa ataagtttcg tccacatcaa ctttcatttt ttttacaaaa
     5041 tcttttaaac atctgtcgca aaccagctta acatttgcaa caattgttcc ttgcacattt
     5101 atatattttc catatgcttt taaaaccagc tcggcaacaa cagcaccttc ggttgaaagg
     5161 tcttttacgg tattgtcaaa acaaatttta agtgactggt ctttagcgtt ttttatatca
     5221 tctatagaaa tcttcatggt ttttttattg tattttagac aaaaggcatt gtcaaaaatt
     5281 ttttaaaaaa gccccctgaa aatcaggagg ctttttataa atcagaaaaa ttattctttg
     5341 ccaactttcc aattcagacc gccggagaat ccaataccgg ttctgccgcc gtttctaatt
     5401 gtaaattgca gatagccgga gaaggtgtct ttgaattttt tcattacacc aaggccatat
     5461 tcaaaatagc agtgacgcat tcttacgtat cctaaatcga tatttcnnnn nnnnnnnnnn
     5521 nnnnnnttgt tgcataaatg ctgaaagtct ttttctgcca tatgaagttc aaaccgggag
     5581 caacgttcaa tccgttgagc atacctgagc tcatactcat agtaccgaag tttgaacccc
     5641 agttctgctg gccaaaagca ttgtatgcag ccataaatgc cggctggata atgaagtcat
     5701 gcggtaatct gatgttataa gcagttttag aagcaacacc tgcaaaccag tttcctgtgt
     5761 tgtcattgcc gctgccatac tgtcctctga tggacatatc attagcataa ccaccgccgt
     5821 atgccaacaa tgatgtcata aagtcacctt tgtaagcagt acccatcaaa ccgagctgag
     5881 cgccgttttg atacatactt acaccgttaa agtgctggtg gccgccattg taagcgatat
     5941 aagctgtagg tactaatttc catccttttt taaggtttat aagcgggaag tcagcaccga
     6001 ttaaagaacc gtatgcgtta tttccaacat tcaaaccttt tgtcatagat agagtttcaa
     6061 atgcaccata agctttatac cagagcgtac cgtcttttat actgtactga tagttatcaa
     6121 taaatggtat tgccgctgca tatttgtttg cagttctttc ttcatccata agttgtcttg
     6181 taacaagatt catatggtca aataacagat tgttaactat caattggttt tgccaagaag
     6241 caattgtagc aacctgacct ctgtattgtt gagggttcaa gttgagtaaa gcagcattaa
     6301 gaattggaga acctgctgaa gaagctgtaa tatggtattg acccattgcg ctgttagcga
     6361 ttacacctcc atccggcaag gcaatccaat ttccgtgacc gccttgtgaa tcagttaaaa
     6421 catttgaaat atcaaattgt acatttctgt caattggaga tgtagtaaag ttgataccgc
     6481 caattaacat ctgataagga tcagggctgc cgttatttgt aattaagtta tttgcaataa
     6541 tcttatctgt ttcttttgat ctgggatcaa catcaaacag aatatttgat gcgctgttaa
     6601 taattacatc atttgctgtg attgtgttaa tagcacctga ctgcatattg attgtcgggc
     6661 tgcttgttgc actgccttga gtacctattg ttaaggtatt accaacctca acattgccga
     6721 gagtatttat tgtagattta tcggtaactg tcaggcttgc aaagtaggaa tcttttccaa
     6781 atgtagcaac cgagttgtca ccttttattg tagtatcttc aaggtcagct tcaccgccta
     6841 ctgttaatac tgtattgtct attattacac tacccaaaga ctcatattcg ttagtaattg
     6901 ttacaacaga atcttttaat acagaatctc cgcctaccgc aagataatca ccaactgtca
     6961 tgttagagcc tgtaacagtc aggttatcat tggtttctac aaatttttca acagccaaag
     7021 ctccgtttgt tacagatagc ttgccatcag ttgctgcctc attttctaca ccaagtccgc
     7081 cggtaacatt catcacagca ttgttgattg ttacattgtt taataactta tctcctgatg
     7141 aagccaagtt taaaacaccg cctgtaacat ttactttgcc gtgatagttt tccattgtgg
     7201 aggcaattgt tgtagagccg gcacctgatt tgtttatgga agctgtatca gctgttgaag
     7261 agattacagg attgtatgta atatctgttg tttgattttc aaagtttaag gatgcgttag
     7321 cgcctactga aactgtagaa ttatctttta tataagcatt gtctgcataa gtaagctttg
     7381 ttgcttcgtt aagtataata ctgtcagctt cagaacctga accgtttcca aaagtcaaat
     7441 ctctaacacc agagtcttta tttaaagtca agtcgccttc aactctggta ccattaagca
     7501 ccccgaggcc gcctgccgtt atattgactt tgtttgttga atcatcagag ttaatataat
     7561 ctattaccgc gttgttgccg ttggcaatag aatctgcaga gattctgtta ataccgtctt
     7621 ctccaacagt accatttatt gcgttgtaga tatcaactgt accgtattca ggataaatat
     7681 ttgcatctgc ctgagggtct cttgcagtta cattaacatc agagctaagg tcagcaccgt
     7741 tttgtaaaac gagcgttccg ccttgtactg tattagttcc gccaaagaat tttgagccgg
     7801 cctgtgcaat cactgtacct aatttttgca gataattgcc gctgaaaccg ctgttgtcag
     7861 aagcaacatt tacagttcca acaccccagt gtttgtctat tttagcagga acattataat
     7921 taggatcgtt agccgcttca tccgcatcat attcagggtt atctacttgt gtaacttttt
     7981 catcaacaag cacattacct gtacctgtta cattgttatt taatgtcata gattttcctg
     8041 aatccggtga caacttcaaa gttgcaggat ttgttacatc gaagttttta tctgcagcag
     8101 cgttattact gccgtttgac agggttaaag tattggaaga tgttccatca cctattttta
     8161 ctgcatcagg atcagctgtc aaaatttgag agttaccaga tatcgtcaaa tcatcagtaa
     8221 gaacatcttt taaggtaatt tctgtatctt ttaagttaaa cgaccctgta atatagccat
     8281 tagtgctatc gccgccaact aaaagtccgt tttggtcaaa cgtagcagag ccaacattga
     8341 cttcaacagc ctctgttacc tcaacagaac cattaatttt gccaccatcg ttaacagtta
     8401 aggatccgcc ttgcaaagta gagcttgttc caaatatacc accgtcgttg acagtgattg
     8461 aagaatcatt gttatcctgg attacattag ctatataaga accgccattt gcaattgtta
     8521 ggcttccgtt attggtaata gatgcagttg atgtcccaga tactgtaaca tcaccgttat
     8581 tgacaacttg ccctgctccg gtagaagtca aagaaccgga gatatctgca accgcacctt
     8641 cttctattgt aaggttagaa gaaccggaaa tatctaatgc agatcctgtt tctgaaacca
     8701 aacctccgcc aatagaaaca ttatgggaat cgcctgtaat cgtagtttct gatccattag
     8761 ccaaataaag gtcatttttg ataccatttg cttcattatc tttaaaagta atatcacctg
     8821 ctgcagtatc taaattaata ttgccggcat tataaatagc accgccgtca ccttttgaaa
     8881 tattttggct aaatattgtg ttaccgctta tattaacttc ggaatctttt ccgccatagt
     8941 ttgcattgta tatagcacca ccgttgcctt cagaagtatt tgcagtaaat tctgcatttt
     9001 ccccaacagt agtttctgca ccccagttag aaatagcacc gcctgtttta cctgcagagt
     9061 tatttacaaa ttttgcacct tcttcaataa ttaaagaggc gttatctcct gcattaaagt
     9121 tcatcacagc accaccatga gaagatgttg tgctgttgtt atagaattct gcattggctc
     9181 cgatagttaa agatgcagct gcaccatcag tatcctgata aatagcacca ccgccatagc
     9241 ctatagcagt attattataa aacttcgcgt tatcacctat ttctgtattt gcacgctgat
     9301 tgtgaacagc accaccctgt ccggcaacgg ctttatttcc tataaaaatt gcatcatcac
     9361 ctataacagt tttgcctgtt gaaccggtat caactgtaga aatagccccc cccacagaat
     9421 ttgctgtgtt atatgcaaaa attgcattat cacccaaatt tactgtagag ccgtctccaa
     9481 aattgcttat agccccacct tgatttgctg tattgccagc aaaaatatta ttttctccgt
     9541 taaa
//
LOCUS       DABS01000201           11535 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_5725, whole genome shotgun sequence.
ACCESSION   DABS01000201 DABS01000000
VERSION     DABS01000201.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 11535)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 11535)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11535
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..1861
                     /locus_tag="CPT85_09180"
     CDS             <1..1861
                     /locus_tag="CPT85_09180"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20695.1"
                     /translation="KISVKGEYMKKIYREKFAIYKGFSLAEALITLLIICVIAIASAP
                     VITKKHRAKLNLPHGVYACYWNGDNLVAKYSINDKESDGKVVYDSEEGRYGCEFNPPT
                     GAKNFVATIVGGGGGGAGAGIAGSNSYKVYASDSGVSTSYTAEETAYYEFLVAGAGGG
                     GGSVWDEGSCASAREGWPCAGSASPGAVVITKPQLFPKGTVFNIAAGQGGSPGNQFAA
                     GQRGGDSYVKVGSTHVIYAQGGGGGFSADLKASPNNKFYYSDSLGTPSGTGLTVVRYV
                     ALKSPIKSTAPDGQSGAMISGLQSGKPGGYYYKGFDIRTAKAETATAQWYQFEMPGAY
                     LLDDNWNVRTFSRTGMAGIVLCSGIAKQTTYAESKGMNAGRPYRNTLLTKSIMDEFYV
                     SQYENQAMPFAAGSSGEVDDGACGATNEAYYTVRGGRGVVAMKWKNFYAGLGGSSGSV
                     TQIPYAEMPQKSLLFPGKGGKGGKGSIVAAGNTGQTAGSSGEQSYIKNGTKIFGGSGA
                     AGIDISNEKSYSIQKNDDGIPVGGNGKLADVLTSKKIDTGGYGGYNNGNLNNYGLTQS
                     VFEGGAAAAGFNKIFGAGAGGGGGAASLNGDNSENITPGDGGNGTSGLVLIQW"
     gene            1995..4646
                     /locus_tag="CPT85_09185"
     CDS             1995..4646
                     /locus_tag="CPT85_09185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007957285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="DAB20696.1"
                     /translation="MENTQTVNFSELPTTYDAKAMEDRIYKFWEDNECFKADAKSPKK
                     PFSIVIPPPNVTGVLHMGHAIDETLQDILVRYHRMSGYETLWVPGTDHAGIATQNVVE
                     KQLRAEGTNRHELGREKFLARTWDWANEHKSAILDQCKRLGASFDRSRERFTLDKGCS
                     EAVKEVFIKLYKKGLIYKGSYIVNWCPRCQSAISDVETEYETEASHLWEISYSLKDQP
                     GAIVIATTRPETMFGDAAIAVNPTDYKYKDLIGKTVVIPLTGREIPIIADEYVDKKFG
                     TGALKITPAHDPNDYEIAKRHNLKPIWVIDGEGKMKACAEVPEELHGLDRDEARKKTV
                     DMLRYHNDLVRITDLEHNVGKCQRCHTTIEPLLSEQWFVKMKPLAEAAIKAVKTGEIK
                     FVPEKWEKNYLGWMENIRDWCISRQLWWGHQIPAYIHNTTGEIVVAKENPDPENYTQE
                     TDVLDTWFSSGLWPFSTMGWPNTDAEDFKKFYPTTTLVTGFDIIFFWVARMITMGYEF
                     TGKAPFSTVYIHGLIRDEKGQKMSKSKGNTVDPVIIIDKYGCDALRFTMTSMCTYGGQ
                     DIKISEDKFEYGRNFANKIWNASRFVLMNLEGVDNKAIDMDNLTIADKWILHRLNETA
                     KLVNENIQTYRIGETAHVLYDFFWNEYCDWYVEIAKIQLQDETQKANTQRVLRYVLDM
                     ALRMLHPIMPHITEAIWQLIPQEKETIGIIKAEFPTYKKEFVFETENKEMELVFETIK
                     SLRNVRQGLNIPLSAQMNITVLAGAAEKPIFEAVVPYLKRLARIESVEFKGEDTQMPK
                     KSASAVVGNSKIIIPLEGLIDFDEEIARQNKKIEKLDKEKMSLEGRLKNKNFVEKAPK
                     ELIEETQARADELNSQIXXKELIETLK"
     assembly_gap    4616..4617
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4696..4893)
                     /locus_tag="CPT85_09190"
     CDS             complement(4696..4893)
                     /locus_tag="CPT85_09190"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20697.1"
                     /translation="MKKDLLEHTITIFENYLIETDSLFAILTDICDNADLTDQTAAKV
                     ILLCDIFKEKNQKIWESMRYK"
     gene            5048..5374
                     /locus_tag="CPT85_09195"
                     /pseudo
     CDS             5048..5374
                     /locus_tag="CPT85_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015469129.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5349..5663
                     /locus_tag="CPT85_09200"
     CDS             5349..5663
                     /locus_tag="CPT85_09200"
                     /inference="COORDINATES: protein motif:HMM:PF01381.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20698.1"
                     /translation="MNGGLNMNNTGSFNEYILKDLKTDEDIKEWINIGFEEFLSDNDL
                     NSFVKALEYAVRAKDSISGMSKKTGISRSNLYAIFNGEQQPQLSTALKIIKELGYTVK
                     IA"
     gene            5667..6020
                     /locus_tag="CPT85_09205"
     CDS             5667..6020
                     /locus_tag="CPT85_09205"
                     /inference="COORDINATES: protein motif:HMM:PF04237.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20699.1"
                     /translation="MNKKQLIQRCLISDDAVETYPFGQDVYKDTCVMRHKSNDKWFAA
                     IFYLDKKLYINVKTEPEIGALLRMQYPSITHGWHMNKKHWIKADPLETPPEVLDEIIK
                     RSFELTAPKSKKRKN"
     gene            6035..6313
                     /locus_tag="CPT85_09210"
     CDS             6035..6313
                     /locus_tag="CPT85_09210"
                     /inference="COORDINATES: protein motif:HMM:PF01381.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20700.1"
                     /translation="MSMQHLNKDKVEILIKSIAQTVKEQRQNLCKSQRLLADEFAIQK
                     SLLSRLENANNEPKIGSLWMVAEALGISASEFFKMVEEKLPEDFKLLD"
     gene            6371..7387
                     /gene="rsgA"
                     /locus_tag="CPT85_09215"
     CDS             6371..7387
                     /gene="rsgA"
                     /locus_tag="CPT85_09215"
                     /inference="COORDINATES: protein motif:HMM:TIGR00157"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="DAB20701.1"
                     /translation="MKGQIFKIHSDFYYVDTVQGTYECKIREVLKKRKDAIVVGDFVE
                     LEQLNENSKQAFVSKVLPRKSFIPRPKVANVNQVIIVCALKEPELDFEQLNRYLSFCE
                     YYNLHPVLCFNKNDLEGEEEIIAKIKKIYEPLNYDIIFTSALEGNGIQDFKALLKDRT
                     TVLCGSSGVGKSSLINAIRPDLNLKTKQVSEKTERGTHTTRHCEIITLENDARIVDTP
                     GFSQLRFDFLMPADVGLLFREIIEIQKQYGACKFSDCIHEHENGCTVQLHPEMMDETR
                     YQSYLQFVKEAKEYKKQVTYSGKKTESKSKFVHNKQITKISSKKRQTSRRKSNQDIDK
                     ELNE"
     gene            7387..8274
                     /locus_tag="CPT85_09220"
     CDS             7387..8274
                     /locus_tag="CPT85_09220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017745041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="DAB20702.1"
                     /translation="MEQNVKKQLEDYKKLIEQKLDEYIPVEYPEKIWESMRYSVLAGG
                     KRLRPILCLEACRVICGSYEPAIPTACAIEMLHSQSLIHDDLPCMDNDDYRRGKLTNH
                     KVFGESTAVLAGDALLSFAPQVIIQKTDKKTDPRILLKVLEEFVVNAGAEKLIAGQVV
                     DIDSEGKQIDKQTLNYIHENKTGALFKLSLRTGAILGNADDSKLAALTEYAEKLGLAF
                     QIMDDILDVTSTLEELGKTPGKDAQEGKVTYVSFYGVEESKKQLASLCAQACDILEKN
                     KIESDVLKAIVNSINERVN"
     gene            8274..8729
                     /locus_tag="CPT85_09225"
     CDS             8274..8729
                     /locus_tag="CPT85_09225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015123709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent PAP2 family protein"
                     /protein_id="DAB20703.1"
                     /translation="MYQTGTAVEVLGNACIAAIIAQVIKFVYFYIAHKKINFKIFTTT
                     GGMPSSHSAGVIALSMTVGYNEGLNSIPFAIALGYAFVVMYDAAGIRRSAGKIAATMN
                     RVMEEFYAHRPTAAGDKLKELLGHTPFEVFMGAILGIVVSYVIHFLILQ"
     gene            8747..10432
                     /locus_tag="CPT85_09230"
     CDS             8747..10432
                     /locus_tag="CPT85_09230"
                     /inference="COORDINATES: protein motif:HMM:PF00512.23"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20704.1"
                     /translation="MVNSTDFSLYNNFAAAVLILDTDNRIVFKNMSFVKSFGSVKNLE
                     KFSKYFSFDICMLDSENILNANPVTFAVESKESFSAQAVYQKSKDQFFYYAIKSFFAD
                     GFKILIFKNITSEILYEETEKKYTFIRQQYLSLAQENKRFADLQQSSQAQAVKLALMH
                     RISNVIRESMDISKILNSTLKELFNLFGAVKVYYVKNEQNAFYVEHVYPSQFKNVIGE
                     KADFSADTKKSVRDKKIKVRSCIKDYQNSENTFPAPVNRIIVPVTRLHDVLGVLIIYT
                     NQKYFEESHSDVLHSVASQLGSAIVQASLFAQVKQKNEELETTLKELKETQIQLINSE
                     KMASLGQLVAGVAHEINTPLGSINANNDILAKLIKKLDGSCNDKMLVENIDNINKIDK
                     EAIKRISNIVKSLKRFVRLDESDLQLADINREIDLTLELIKHETKNKIQIVKNYAQLP
                     EIKCYPNMLNQVFMNILINACQSIEKTGMITITTGFENNRLIVKIKDTGCGIDDSIKD
                     KIFAAGTTTKKIGIGTGLGLAICQKIIEKHKGSISFTSQKNAGTEFKIEIPAG"
     gene            10600..10848
                     /locus_tag="CPT85_09235"
     CDS             10600..10848
                     /locus_tag="CPT85_09235"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20705.1"
                     /translation="MRVGFSTNSMSCQPLRNFGKADNLPKNNTPAANNNPAFTSGTVS
                     RAEYDKLNAKYDLLSRFAVLQVQQYNELAAKYKAIAQK"
     gene            complement(10859..11248)
                     /locus_tag="CPT85_09240"
     CDS             complement(10859..11248)
                     /locus_tag="CPT85_09240"
                     /inference="COORDINATES: protein motif:HMM:PRK12497.3-3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="DAB20706.1"
                     /translation="MPSNHANKITGRLGEDIACNFLEKLGYKILAKNYRYSRFAEIDI
                     VAKDKDTIVFTEVKTRYGTNFGHPFEAVNHKKLLNIFKAGLYYLQNNKEYYKRYRIDI
                     VSVILNAQNTTQDIEPVIEHLKDVSLN"
     gene            complement(11238..>11535)
                     /locus_tag="CPT85_09245"
     CDS             complement(11238..>11535)
                     /locus_tag="CPT85_09245"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20707.1"
                     /translation="ITEANQTPQMSFSNSPGSVTFKLTGRLARAYKLKEGENIIEYDL
                     KKKKYIIVSNKTQDKDLLLRRLIRYFGSCEILYPKSMKEKMLTLVEEMEKIYAQ"
BASE COUNT         3781 a         2174 c         2427 g         3151 t
ORIGIN      
        1 aaaaataagt gtcaaaggag aatatatgaa aaagatttac cgtgaaaaat tcgcaatata
       61 taaagggttt tcactggccg aggcgttgat aacactgctt atcatctgcg taatagcaat
      121 tgcctcggct ccggttataa ccaaaaaaca cagggcaaaa ctgaatcttc cgcatggtgt
      181 atatgcgtgt tactggaatg gcgacaacct cgtggccaaa tattcaataa acgacaaaga
      241 atcagacggc aaagtggttt acgatagcga agaaggccgc tacggctgtg aatttaaccc
      301 tccgacagga gcaaaaaact ttgttgctac gatagttggc ggtggcggag gcggtgccgg
      361 agcaggaatt gccggttcaa attcttataa agtctatgct tcagattccg gcgtttctac
      421 atcttataca gctgaagaga ccgcttatta cgagtttctt gtagcaggag ccggtggtgg
      481 cggaggttct gtatgggatg aaggctcttg tgcaagtgca cgcgaaggct ggccctgtgc
      541 aggttcagct tccccgggcg ctgttgttat tacaaaaccg caattgtttc ctaaaggtac
      601 tgtgttcaat attgcagccg gtcagggcgg gtctccgggc aaccagtttg ctgctggcca
      661 aagaggcggc gattcttatg taaaagttgg ttctacacat gttatctatg ctcaaggcgg
      721 tggcggcggc ttttcagctg atttaaaagc ttctcccaat aacaaatttt attattcgga
      781 ttcgcttggc acaccttcgg gtacaggact tacggttgta cgatatgttg ctttaaaatc
      841 tccgataaaa agcactgcac cggacggaca aagcggtgcg atgattagcg gtttgcagtc
      901 cggaaaacca ggcggatatt actacaaagg ttttgatatt cgtactgcaa aggcagagac
      961 tgctactgcg cagtggtacc aatttgaaat gcccggtgca tatctgcttg atgacaattg
     1021 gaatgtgcga acattttcca ggacaggcat ggcaggaata gtgctttgca gcggaattgc
     1081 aaaacaaaca acatatgctg aaagtaaagg tatgaatgct ggcaggcctt acagaaatac
     1141 ccttttgaca aaatctatta tggacgagtt ttatgtttcg caatatgaaa atcaggccat
     1201 gccttttgct gcgggttcgt caggtgaggt agatgacgga gcttgcggtg caactaatga
     1261 ggcatattac acggtaagag gcggcagagg cgttgttgca atgaaatgga aaaattttta
     1321 cgcagggctg ggtggcagct cgggcagtgt aacccagatt ccttatgctg aaatgcctca
     1381 aaaatctttg cttttcccgg gtaaaggcgg aaaaggaggc aaaggcagta tcgttgcagc
     1441 aggcaatacg ggacaaaccg ccggttcttc cggagagcaa tcttatatta aaaatggtac
     1501 aaaaatcttt ggcggttcag gtgcagctgg cattgatatt tctaacgaaa aaagttattc
     1561 aatccaaaaa aatgatgatg gcattcctgt cggaggaaat ggcaagctgg ctgatgtatt
     1621 aacttccaaa aaaatagata caggcggcta tggtggctac aataacggca acttgaacaa
     1681 ctatggctta acccagagcg tgtttgaagg cggcgcagcc gcagcagggt ttaacaaaat
     1741 tttcggagcc ggtgccggcg gaggcggtgg tgctgcctct ttaaacggtg acaactccga
     1801 aaacataacc ccgggtgacg gaggcaacgg cacttcggga ctggttttaa tccagtggta
     1861 aaaccagaat tcttcaaaac agtacttatt gacctctgtc tgacagaggt ctttttttcg
     1921 catggaaatt agaaatttaa tcgtctttgt gatattttaa aatcatctga aaaactagaa
     1981 gaggcgcaaa ggatatggaa aatacacaga ctgttaattt tagcgaattg ccgactacat
     2041 acgatgcaaa agctatggaa gatagaattt acaaattttg ggaagataac gaatgcttta
     2101 aagcagacgc aaaatcgcct aaaaagccgt tttcaatagt aattccaccg ccgaatgtta
     2161 caggtgttct tcatatgggt cacgctattg acgaaacttt gcaggatatc ctcgttcgct
     2221 accacagaat gtcgggatat gaaactctct gggttccggg tactgaccac gcaggaatcg
     2281 caacacaaaa cgttgtggaa aaacaattga gagccgaagg cacaaaccgc cacgagctcg
     2341 gcagagaaaa atttcttgcc cgcacgtggg attgggctaa cgagcacaaa agcgctatct
     2401 tagaccagtg caaacgcctc ggtgcttctt ttgaccgttc aagagaaaga ttcacccttg
     2461 ataaaggctg ctctgaagca gttaaagaag tttttataaa gctgtataaa aaaggcttaa
     2521 tctacaaagg ttcttatatc gtaaactggt gtccgcgctg tcagtcagct atttcagacg
     2581 ttgagacaga atacgaaaca gaagcaagcc acctctggga aatcagctat tcactgaaag
     2641 accagcccgg cgctatcgta attgcaacaa caagacctga aacaatgttc ggcgacgctg
     2701 cgattgcggt taatccgaca gattacaaat ataaagactt aatcggcaaa acggttgtta
     2761 ttccgcttac aggcagagaa attcctatca ttgccgatga atacgttgat aaaaaattcg
     2821 gtacaggcgc gttgaaaatc actcccgcgc acgacccgaa cgactatgaa atcgcaaaac
     2881 gccacaacct caaacccatc tgggttattg atggcgaagg caagatgaaa gcttgtgcgg
     2941 aagtgccgga agaactccac ggccttgaca gagacgaagc acgtaagaaa accgttgata
     3001 tgcttcgtta ccacaacgat ttggtcagaa ttacagacct tgaacacaac gttggaaaat
     3061 gtcagcgctg ccacacaaca atcgagccgc tgctttccga acaatggttt gtaaagatga
     3121 aaccgcttgc agaagctgct attaaggctg ttaaaacagg cgaaataaaa tttgttcccg
     3181 aaaaatggga gaaaaactac ctcggttgga tggaaaatat ccgcgactgg tgtatttccc
     3241 gtcaattgtg gtggggacat cagattcccg cttacatcca caatacaaca ggcgaaattg
     3301 ttgtagcaaa ggaaaatccg gaccctgaaa attatactca agaaaccgat gttcttgata
     3361 catggttttc atcaggcttg tggccgttct ctacaatggg ctggccaaac actgatgctg
     3421 aggatttcaa aaaattctac ccgacaacaa cccttgtaac aggctttgac attattttct
     3481 tctgggttgc aagaatgatt acaatggggt atgaattcac aggcaaagca ccgttttcaa
     3541 ccgtttatat ccacggctta atccgtgacg aaaaaggcca gaaaatgtca aaatccaaag
     3601 gcaacaccgt tgaccctgtt atcattattg acaaatacgg ctgcgacgca ttgagattca
     3661 caatgacatc aatgtgtaca tacggcggtc aagacatcaa aatcagcgaa gacaaatttg
     3721 aatacggcag aaactttgcc aacaaaattt ggaacgcctc aagattcgtg cttatgaacc
     3781 tcgaaggcgt tgacaacaaa gcaattgata tggacaatct tacaattgct gacaaatgga
     3841 ttttgcacag actcaacgaa accgcaaaac tcgttaacga aaatattcaa acttacagaa
     3901 tcggcgaaac agcacacgtt ttgtatgatt tcttctggaa cgaatattgt gactggtatg
     3961 ttgagattgc aaaaatccaa ttgcaggatg aaactcaaaa agctaacact caaagagttt
     4021 tgagatatgt tcttgatatg gctttgagaa tgctccaccc gattatgccg cacattacag
     4081 aggctatctg gcagttgatt ccgcaagaga aagaaacaat cggtatcatc aaagcagagt
     4141 ttccgactta taaaaaagag tttgtttttg aaactgaaaa caaagaaatg gagcttgttt
     4201 ttgaaacaat taagtctttg aggaacgtcc gtcagggctt gaacattccg ctttcagcgc
     4261 agatgaatat aactgttctt gccggtgctg ctgaaaaacc gatttttgaa gcggttgtac
     4321 catacttgaa acgtcttgca agaattgaaa gcgttgaatt caagggcgaa gatactcaaa
     4381 tgcctaaaaa atcagcgtct gctgttgtgg gtaattcaaa aattatcatt ccgctagaag
     4441 gtttgattga ttttgacgag gaaatcgcac gccagaacaa gaaaattgaa aagctcgaca
     4501 aagaaaaaat gagtttggaa ggcagactta aaaacaaaaa ctttgttgaa aaagcgccaa
     4561 aagaattgat tgaagaaact caagcccgcg ctgatgagct gaactctcaa atcaanngaa
     4621 aagagcttat cgagactttg aagtaagatt atcattttat acaagaacag agcctgtaaa
     4681 atcggctctg tttttttatt tataccgcat cgattcccag attttttgat ttttttcttt
     4741 aaatatatcg cagagcaata tcacttttgc tgcggtttgg tctgttaagt ctgcgttgtc
     4801 acagatatct gtcaggatag caaacaggct gtctgtttct atcaggtagt tttcaaaaat
     4861 tgtgattgtg tgttccagta aatctttttt cattgtttta ttttaaattg ttcttttaac
     4921 aaagtactca ttgacgaata atattgttac ttttttaaat tagtatttta gatttaaact
     4981 attgttttaa aaatgtaaat ccacctttac gattgacaaa gtgtcctgta tgcagtacac
     5041 ttatattatg aaaacgtatg agattaaata tctgatatgc gcaaatggct ctgcacctgt
     5101 tttggattgg cttgattctc ttgacaatac aatccgaaaa cgtattgtgc aaaggatttt
     5161 gagaatagaa gaaggtaact tcggtgatac taaaaagtta tcagatgata tttcagaatt
     5221 aaggttttaa tttggaaaag gatatcgcgt atattatacc caaactaaca atacaatagt
     5281 tttacttgta aacggcggag acaaatccgc tcaggctaaa gatattgaaa aggctcacaa
     5341 acttcttgat gaatggaggt ctaaacatga ataacacagg ttcttttaac gaatatattt
     5401 taaaagattt aaaaactgat gaagatataa aagaatggat aaatatcggc tttgaagaat
     5461 ttttatccga taatgatttg aattcatttg taaaagctct ggaatatgct gtgcgtgcaa
     5521 aagattctat ctccggtatg tcaaaaaaga caggaatttc aagaagcaac ctgtatgcaa
     5581 tatttaacgg agaacagcag ccgcagctgt ctacagcgtt aaaaattata aaagagttag
     5641 gctatactgt taaaatcgca taaccaatga acaaaaaaca attgatacaa cgctgtttaa
     5701 tttcagacga cgcagtagaa acctacccat tcgggcaaga tgtttataaa gatacctgtg
     5761 ttatgcgcca caaaagcaat gacaaatggt ttgctgcaat tttttacctt gataaaaaat
     5821 tgtatataaa tgtcaaaaca gagcctgaaa taggggcact gcttcgtatg caataccctt
     5881 ctatcacaca cggctggcat atgaacaaaa aacactggat aaaagcagac ccgctagaaa
     5941 caccgccgga ggtgcttgat gaaataatca aaagaagttt tgaattaact gcaccaaagt
     6001 caaaaaaacg caaaaattaa acttgcaatt ggagatgtct atgcaacacc ttaacaaaga
     6061 caaagttgaa atactcatca aaagtattgc gcaaactgtc aaagaacaaa gacaaaattt
     6121 gtgtaaatct caacggttgc ttgctgatga atttgctata caaaagtctt tattgagcag
     6181 gttggaaaat gcaaataatg aacccaaaat cggctcattg tggatggttg cagaagcact
     6241 tggcatttcg gcgtcagaat tttttaaaat ggttgaagaa aaattacctg aagattttaa
     6301 gctgttagat tgattctctt ttaataatca tatatttacc cgaaccccgt gttgagctat
     6361 aatcaaatgc atgaaagggc agatttttaa aatacattcg gatttttact acgttgatac
     6421 agtgcagggc acgtacgagt gcaaaatccg tgaagtttta aaaaaaagaa aagacgcaat
     6481 tgttgtgggc gactttgttg agctggaaca gctgaacgaa aactccaaac aggcgtttgt
     6541 ttccaaagtt ttgccaagaa aaagctttat cccccgccct aaagtggcaa atgtaaatca
     6601 ggtgattatt gtctgtgcgc tcaaagagcc agagcttgac tttgaacagc ttaacagata
     6661 tttgtctttt tgtgagtatt acaaccttca tcctgttttg tgctttaaca aaaacgacct
     6721 tgagggcgaa gaagaaatca tcgcaaaaat aaaaaagatt tatgaacctt taaactacga
     6781 tattattttt acatctgcgc ttgaaggcaa cgggatacag gattttaagg cacttttaaa
     6841 agacagaaca accgtgctgt gcgggtcttc cggtgtggga aaatcttctt tgataaacgc
     6901 catccgccct gatttaaacc ttaaaacaaa acaggtctct gaaaaaacag aaagaggcac
     6961 gcacacaaca aggcattgcg agattattac gcttgaaaat gacgcaagga ttgttgatac
     7021 accggggttt agccaactgc gttttgattt tttaatgccg gctgatgtcg ggcttttgtt
     7081 tagagaaatt attgaaatac aaaaacaata cggtgcgtgc aaattctctg actgtataca
     7141 cgaacacgaa aacggctgca ctgtgcagct ccaccccgaa atgatggatg aaacaagata
     7201 tcaaagctat ctgcaatttg ttaaagaagc aaaagaatat aaaaaacagg taacctacag
     7261 cgggaaaaaa acagaaagca aatcaaaatt tgtgcacaac aaacaaataa caaaaatcag
     7321 cagcaaaaaa agacaaacat caaggcgcaa aagcaatcag gatatagata aggaactgaa
     7381 cgaataatgg aacaaaacgt aaaaaaacaa cttgaagatt acaaaaaact gatagaacaa
     7441 aaactggatg agtacatccc tgttgagtat ccggaaaaaa tctgggaatc aatgagatac
     7501 tctgttcttg caggcgggaa aagacttcgc cctattttgt gtcttgaggc gtgcagggtg
     7561 atttgcggaa gctatgagcc tgcaatacct actgcctgtg ctattgagat gcttcattca
     7621 caaagcctta tccacgacga tttgccttgt atggacaacg atgattacag acgcggaaaa
     7681 ctcacaaacc acaaggtttt tggcgaatct acagcagtgc ttgcaggtga tgcgcttttg
     7741 tcttttgcgc ctcaggtaat tatccaaaaa acagataaaa aaacagaccc ccgcattctt
     7801 ttaaaagtgc ttgaagagtt tgttgtaaac gccggagcag agaagcttat tgcaggtcag
     7861 gttgttgata ttgactctga gggtaagcag attgacaaac aaaccttgaa ttatatccac
     7921 gaaaacaaaa ccggcgcact gttcaagctg tcattgagaa caggtgcaat acttggcaat
     7981 gcggatgatt caaaacttgc ggcacttact gaatatgcag aaaaactcgg gctggctttt
     8041 cagattatgg atgacattct ggacgttact tccacgctcg aggaactcgg taaaactccc
     8101 ggaaaagatg cacaggaagg taaagttact tatgtaagtt tttatggtgt tgaagaatca
     8161 aaaaaacaac ttgcttccct ttgtgcacag gcttgtgata tattagaaaa gaataaaatt
     8221 gagtccgatg tactaaaagc gattgtgaac agcatcaatg aaagggttaa ttaatgtatc
     8281 aaacaggcac ggcagttgaa gttttaggta atgcctgcat agctgctatt attgcacagg
     8341 ttataaaatt tgtttatttt tatatcgcac acaaaaaaat aaacttcaaa atttttacaa
     8401 caacaggcgg aatgcccagc tctcacagtg ccggcgtaat tgctctttct atgaccgtag
     8461 gctacaacga agggctcaac tccatacctt ttgcaattgc actcggatat gcttttgttg
     8521 ttatgtatga tgcagcgggt atcagacgtt cggccggtaa aattgccgct accatgaacc
     8581 gcgttatgga agagttctac gctcaccgac ctactgctgc gggtgacaaa ctcaaagagt
     8641 tgctcggaca cactccgttt gaagttttta tgggcgcaat tcttggtatt gttgtttctt
     8701 atgtaataca ttttttaata ctccaatagc gtgttaaaat attttcatgg ttaacagtac
     8761 cgattttagc ttgtacaata attttgctgc tgctgtgttg attctggaca cggataacag
     8821 gattgtgttc aagaacatga gctttgtcaa aagttttggc agcgtaaaaa atctggagaa
     8881 attttcgaaa tatttttctt tcgacatctg catgctggat tcggaaaata tcttaaacgc
     8941 aaatcctgtt acctttgcag tggaatccaa agagagtttt agcgcacagg ctgtttatca
     9001 aaagtctaaa gaccagtttt tttattatgc aataaaatct ttttttgctg acggcttcaa
     9061 gatattgatt tttaaaaata tcacatcaga gattctctac gaagaaaccg aaaaaaaata
     9121 cacctttatc cgtcagcagt atctatcgct tgcgcaggaa aacaaacgct ttgcggattt
     9181 gcagcagagc tcgcaggcac aggctgtaaa actcgcttta atgcacagga tttctaatgt
     9241 cataagagaa tccatggata tttcaaaaat ccttaattcc acgctaaaag agcttttcaa
     9301 cctgtttggc gcagtcaagg tttattacgt aaaaaatgaa caaaacgctt tttatgtgga
     9361 gcatgtttat ccttcgcagt tcaaaaatgt tattggcgaa aaggctgatt tttcagcaga
     9421 tacaaaaaaa tcggtgcgag ataaaaaaat aaaagtacgc tcttgcataa aggattatca
     9481 aaacagcgaa aacactttcc ctgcacctgt taacaggatt attgttcccg taacaagact
     9541 gcatgatgtg ctgggggttt tgataattta tacaaatcaa aaatactttg aagaatccca
     9601 cagcgatgtg ctgcattccg tggcatcgca gctggggtct gcaattgtgc aggcgtcttt
     9661 gtttgcacag gttaagcaaa aaaatgaaga gcttgaaaca acgctaaaag aattgaaaga
     9721 aacccagatt cagctgataa actctgaaaa aatggcttct ctgggccagc ttgttgcagg
     9781 cgttgcacac gagataaaca ctccgctcgg ttctatcaat gccaataacg atattctggc
     9841 aaagcttatc aaaaaactcg atggcagctg caatgacaaa atgcttgtcg aaaacataga
     9901 caatatcaac aagatagata aagaggccat taaaagaatc agtaacattg taaaaagcct
     9961 gaaacgcttt gtcaggctgg atgaatcaga ccttcagctt gcggatataa acagagaaat
    10021 tgatcttacg cttgaactga ttaaacatga gacaaaaaat aaaatccaaa ttgtcaaaaa
    10081 ctacgctcaa ctgcccgaga taaaatgcta tccaaacatg cttaatcagg tgtttatgaa
    10141 tattcttata aatgcctgcc agagtattga aaagacaggc atgattacta ttaccacagg
    10201 ttttgaaaac aacaggctga ttgtaaaaat aaaagacacg ggctgtggca tagatgacag
    10261 cattaaggat aaaatctttg ctgccggaac aacaacaaaa aaaatcggca ttggcacagg
    10321 gctcgggctt gctatttgtc aaaaaattat agaaaaacac aaaggcagta tttctttcac
    10381 ctcgcaaaaa aatgccggca cagaattcaa aatagaaatc cccgcgggtt agatttatca
    10441 caaagtttac ttaaaagtag taaaaacagg taataatcgg aattaaaaat tacccgtttt
    10501 taaatgtaaa gtttattgaa attttgtaaa aaaagagtta taataaaaaa gctggagagt
    10561 aaaagtgttt aataggataa gaaagaaagg agaattataa tgcgcgtcgg tttttccaca
    10621 aactcaatgt catgtcagcc tttaagaaac tttgggaaag ctgataactt gcctaaaaat
    10681 aatactcctg ctgctaacaa caatcctgcc ttcacttccg gcactgtatc ccgtgcggaa
    10741 tacgacaaac ttaatgcaaa atacgatttg ttaagccgct ttgcagtttt acaggtacaa
    10801 caatacaacg aactcgctgc aaaatataaa gctattgctc aaaagtagtt tatctttttt
    10861 aattcaggct tacatctttt aaatgctcta tcacgggctc tatatcctgt gtggtgtttt
    10921 gagcgttcaa tatgactgat actatatcaa ttctgtatct tttgtaatac tctttgttgt
    10981 tttgcaggta ataaagcccg gctttaaaaa tgttcaaaag ttttttatgg ttgacagcct
    11041 caaacgggtg gccaaaattt gttccatagc gggtttttac ctctgtaaac acgattgtgt
    11101 ctttgtcttt tgccacgatg tcaatctctg caaaacgcga gtatctgtag ttttttgcca
    11161 gaattttata acccagcttc tcaagaaaat tgcatgcaat atcctcgccc agtctgccag
    11221 taattttgtt ggcatggtta ctgggcataa attttctcca tttcttcaac gagtgtgagc
    11281 attttttctt tcattgattt tggatataaa atttcacagc tgccaaaata tctgatgagt
    11341 cgtcttaaaa gcaggtcttt atcctgtgtt ttgttggaaa caattatgta ttttttcttt
    11401 ttcaaatcgt attcaataat attctcgcct tctttgagct tgtaggctct ggccagtctg
    11461 cctgttagtt tgaaagtaac agaaccgggc gagtttgaaa aactcatctg cggagtctgg
    11521 tttgcttctg tgatg
//
LOCUS       DABS01000202           12679 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_17134, whole genome shotgun sequence.
ACCESSION   DABS01000202 DABS01000000
VERSION     DABS01000202.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 12679)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 12679)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12679
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..215
                     /locus_tag="CPT85_09250"
     CDS             <1..215
                     /locus_tag="CPT85_09250"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20675.1"
                     /translation="FPDKINAVKGYFSGAFSQLASDIIPAGLATGALLCKKFSKFFSL
                     ALLAYGIKYLFCDIIDIGRPNHLKGE"
     gene            complement(193..759)
                     /locus_tag="CPT85_09255"
     CDS             complement(193..759)
                     /locus_tag="CPT85_09255"
                     /inference="COORDINATES: protein motif:HMM:TIGR02727"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="DAB20676.1"
                     /translation="MNQKKNNTRHYAKSIRSMLDVEACSRDICSQILLWEKYRAARHV
                     MLFYPIGTEISLLQLVKDKTKSFYFPILDENNNIYPVLYEENSGFKKGAFNINEPIGV
                     PVRDFSVLDMIFIPALAIDTRGFRLGYGKGCYDRFICHLSDRTLKVVPISKNLIFNDI
                     PVEQHDKNVDYAICENGITGFATHLLNG"
     gene            863..1213
                     /locus_tag="CPT85_09260"
     CDS             863..1213
                     /locus_tag="CPT85_09260"
                     /inference="COORDINATES: protein motif:HMM:PF12844.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="DAB20677.1"
                     /translation="MNRKELSKKLRLARIESGLKQEEIAELMNLPISGISVIEKGSRK
                     VDVIELLKFAQYYNKPVEWFLYDKQDTNSRRWYDKDQKLAEAITLLQKAPIKYQKSCA
                     CAIIGFLKESGLVK"
     gene            1213..1791
                     /locus_tag="CPT85_09265"
     CDS             1213..1791
                     /locus_tag="CPT85_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015757500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="DAB20678.1"
                     /translation="MAQTDDNKLYNPEFLQHGYIQVYTGNGKGKTTASLGLAMRALGR
                     GWKVLIVMFTKGGNDYGELIFFSTLCPELKDKVKIVQAGLDRIVYSTNMSADDSKQIQ
                     KGWEIAKKAIQNDEYQLIILDEANIALDLKLIDLNEMIDVLKNKPEEMEIVLTGRNAK
                     EEIIDIAHLVSEIKPVKHYWDKGIKARKGIEF"
     gene            1859..2113
                     /locus_tag="CPT85_09270"
     CDS             1859..2113
                     /locus_tag="CPT85_09270"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20679.1"
                     /translation="MAQQFPPQQYKTRLALLVFLKGASAPMVLYFEDPKAVFDEILPL
                     IRVQSSVGKLIEKEATGPIKKVAIMSNQIASIALQEEVCQ"
     gene            2151..4265
                     /locus_tag="CPT85_09275"
     CDS             2151..4265
                     /locus_tag="CPT85_09275"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20680.1"
                     /translation="MKIVEIKNSLAKLYYKPSELPLLLSDFLTIDDGNKKLLSQVVSI
                     ESTNTESTNCAILKFSLDINENNTYAVYSGYTPALDAKIEKTPTNIIDSVFSSAYKTI
                     LIGNLTGSTQAEINLNASVIDKFLYLQSDRIEDTQKFISKLVEFNNDNGLKTLLIDLD
                     GIAEYSNTNVIELGKEFKLPIGNETLNYIYEYDLTGLTLEQKTIVQDIILEIQEYINT
                     LESGFIPFNTLLEVVNDIYDSDKSTGIILLRNKLLKYKQFDIFASTQEEIDTLELSLK
                     NNNVTVLSIAGLNKNWQKEAVYFAVNNIKENYYFILEATDEITDKQLLNKIYKSPNIK
                     PIVSSRYDYVNANLVKSYAKNLVLFKPEEQQRAFATYNSFLMKLAQHEFIVSGDATYY
                     TPLIIKETAQKFIQTINSEPEPVIITDAQAVTVEDIPQEEEVEVLPADSEDDLSNIDI
                     QPLSEDEILPLEEQIEEEPNELKNIFEESLEQEIAKDVDQMFYAAPAQTEEVFETEES
                     LETEEEIEALPEAPLEEMIDTQGLSDEDLDLLDSLSGNDEEIISNESEELLPDIEQEQ
                     NEQILNDNNELSLEESLIAISDEESDDISINTELPNIESSNDLNINNEFSEPEIQEIA
                     EEPEISEQQSIPIYKTELDENNSDNENVKIAEGNIVYHEKYGRGVVEELFNYGKRTLC
                     SIQFDNVGRRLLDPNLAELKQM"
     gene            4330..4815
                     /gene="fliS"
                     /locus_tag="CPT85_09280"
     CDS             4330..4815
                     /gene="fliS"
                     /locus_tag="CPT85_09280"
                     /inference="COORDINATES: protein motif:HMM:TIGR00208"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="DAB20681.1"
                     /translation="MNPYLKQYRQTQIDTAPKEQILLMLYDGAVRFLNQAKAGFAEKN
                     IEKIHNNIVKVQNIITEFESTLDMKTGGEFAQNLFALYEYINNQLLLANIKKREECLD
                     EALKHMTELRDTWRQAVKQFKAAGHSLDENDMDHYNSRVSTSEPDDEDNEDDDKMGEY
                     I"
     gene            4818..5189
                     /locus_tag="CPT85_09285"
     CDS             4818..5189
                     /locus_tag="CPT85_09285"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20682.1"
                     /translation="MSIDLDNLEMTYKKIYEVSVQIAQLIDRQIYTELVTFMSKKEQL
                     FKEAGNLIEKVKAKNEDTSRLVEICTKIQKQEQENIVALSMVRDEIKKELGKTAKXSL
                     LAHIQMQNLNRVTFWITGNDY"
     assembly_gap    5116..5117
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5179..6096
                     /locus_tag="CPT85_09290"
     CDS             5179..6096
                     /locus_tag="CPT85_09290"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-efflux pump"
                     /protein_id="DAB20683.1"
                     /translation="MIINAFFHNKKLAASLSVLSNFILIVLKLITGFVTGSVSIISEA
                     IHSGSDFLASIIALFAVHKAEEPADKDHPFGHGKYEDAAGFAEGCLIILASLYIIYEA
                     GLKLTGSSEPLSNSTAGIAVMLVSVITNIAVSSYLFKVAKNTDSIALHSDAQHLCTDI
                     YSSLTVLVGLVIIKYTGHHVIDSLIAVIVAMIIMHTGYRICKETLNDLLDGSLPQNDI
                     DLIQYTIQNNNHSENICKIKDIKTRKSGKNKDIVITLIVDGSMTVAQAHKLCDKLECE
                     IENALGNTKIIIHVEPQTEHNLSCQNNDI"
     gene            6110..7198
                     /locus_tag="CPT85_09295"
     CDS             6110..7198
                     /locus_tag="CPT85_09295"
                     /inference="COORDINATES: protein motif:HMM:PF00211.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="DAB20684.1"
                     /translation="MSRKKLLLLFILSFLCVIFTLNNICYKHFDNKLDTIITQNRLKT
                     TDTQVINNILEQNKVIIISEHTRLVLTLGTSVLFLAVFVFYETIPAIVFIIIFLIAYL
                     IAYKLLLNNFVYINIAGIIISAAVSKLYAGAYIHLFKENVDKKIENVLGKYISKDITN
                     KILKNKAGAELGGKRSEITVMFADIRGFTSLSESHKAEEVSQLLNEYFTELEPIITKY
                     NGVINKFIGDAVLVVFGDPTQDKLHAKNAVKCAYELRKKVKQIKQRWLEEGKPKIDIG
                     IGINTGEAFIGNVGTKNRFEYTVIGDTVNIASRIEDYNKIYKTHILISENTYNKISQI
                     VDVIKIREVSIKGKSKKINIYEVLRITE"
     gene            7198..9609
                     /locus_tag="CPT85_09300"
     CDS             7198..9609
                     /locus_tag="CPT85_09300"
                     /inference="COORDINATES: protein motif:HMM:PRK10917.2-2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="DAB20685.1"
                     /translation="MIENIEQIRQAIEVEQKNQYIDIRGRHDTFSGFILKQLHNLYKK
                     SKKNPKWILLIKEFETYAISSMPTRRKAVQRLIVTLKQEITQEGDVKKTDLSVITKDP
                     SKTDVMYVKGVGPKVGNLLNKLGIYTARDLLFYFPKRHIDYSSRTLIRELKEGKDATI
                     IGTIKSISAYNSKNNLGIISVTIADETGVVKLSFFYAKANRFLLERYKSQFLKGSNII
                     VSGKAKIDKFSGTYTIEKPEFQVLSGEFEGKNNLNLARIVPVYQLSEGLNIKTLRRAI
                     FNAIEQFEPVIKNVIPDYIMARNNLLDRNKAIRQIHFPENEEMLEKARYTLVFEEFFL
                     LQLKLAMLREENSQKIKALPLKIKKDGLVKKFLESLPFELTNAQDKALKEILRDIASD
                     TPMQRLLQGDVGSGKTVVSCAMLLSAVENGYQGVLMAPTEILAQQHFNNFVRWLTPFG
                     LSIGLFTGTNGVKVRRKLETDLKNGQINIAIGTHALIQNNVEFKNLGAIVIDEQHRFG
                     VKQRSQLMTKGKNPQVLTMTATPIPRTLALTTQGDLDFSVIDEMPKNRKPIKTYVIKP
                     SQRTQAYKILSNEIANGHQCYIVYPLIDESETLSAKAATNEAERLKAEVFPDLNIGLL
                     HGKLSNAEKDAVMEKFKNKEYDILVSTTVVEVGVDVPNSTVMMIENAERFGLSQLHQL
                     RGRVGRSDLQSYCILVPANSSQTTMDRLQIMEQTNNGFIISEKDLELRGPGEFLGTRQ
                     SGMVNFLLADIIKDTKILEKAREEAFELVKNINDETGKAAVPKALAQELDEKFRTIPD
                     LSTLD"
     gene            9888..10418
                     /locus_tag="CPT85_09305"
     CDS             9888..10418
                     /locus_tag="CPT85_09305"
                     /inference="COORDINATES: protein motif:HMM:PF04275.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20686.1"
                     /translation="MADKIIILSGKQYSGKDTVAKILLQNLTNFKRIGLGDAIKLEYS
                     EKTGIPFEEIEKNKHLYRQDLINLGNQRRSEDKNYWIKKVIQMPGNIIVPDVRVKREL
                     EFFKEADAYKIRVDASRETRSERGQLVGETDVTEVDLDDVKEWDYVISNNSTYENLQA
                     ESIKLAKEIKSFLAGK"
     gene            complement(10431..10646)
                     /locus_tag="CPT85_09310"
     CDS             complement(10431..10646)
                     /locus_tag="CPT85_09310"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20687.1"
                     /translation="MCEVLNKIIEGVNELEELMCEYSEMNAFLFSHNKIFMIASSNLY
                     KTPEYNHQPYTFKYGDFCVGDYIKNYN"
     gene            10775..11212
                     /gene="rpiB"
                     /locus_tag="CPT85_09315"
     CDS             10775..11212
                     /gene="rpiB"
                     /locus_tag="CPT85_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012371559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="DAB20688.1"
                     /translation="MNKKIIIGSDHAGFILKNKLAAYLQQAGFDVDDAGTYTTESCDY
                     PIIAKEVAQNIKEGKYEKGILVCGTGIGMSIAANKVKGIRAAVVSDTCSAKMSRLHND
                     ANILCLGERIVGEELAKDIAEIWLKTPFLGERHSRRVEMFEQD"
     gene            complement(11209..12090)
                     /locus_tag="CPT85_09320"
     CDS             complement(11209..12090)
                     /locus_tag="CPT85_09320"
                     /inference="COORDINATES: protein motif:HMM:PF01740.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20689.1"
                     /translation="MEINNEQLKKLFDLSGLDADVLSATTDDINKALILIERKFLSLL
                     SNEAMTVPAEFNILIVDDLELSIYQFNQLLKKVGIVPTVARNKVEALAELKKKKFDYI
                     VVDLFLPDAQDGIELIEECIKLRDAKRTNKIIVMSGTDDKDLIEKCYKLGIDEFVPKS
                     SNWHDQILKFITSSLTSKQHEDFFKYSINDNICCYTINKFNSQRHIDLIVKDVTTSLY
                     TGFSNIIFNMENVKIFDDEYTSVFTSLYKMCNDKGGKFMLVKISDSVKSALADAFLDT
                     LIPTYTSVDLAVSKISS"
     gene            complement(12125..>12679)
                     /gene="trmD"
                     /locus_tag="CPT85_09325"
     CDS             complement(12125..>12679)
                     /gene="trmD"
                     /locus_tag="CPT85_09325"
                     /inference="COORDINATES: protein motif:HMM:TIGR00088"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="DAB20690.1"
                     /translation="CQPYFDCFDSIQKSEDTEVIILSPQGEVFNQQMSCELAQKSHII
                     LICGHYEGFDERIKQYTKAREVSIGDYVLTGGELPAMCIIDSVSRNIEGFLGKIDSAH
                     YDSFSDGLLEHPQYTKPREYNGLCVPEVLLGGNHAQINRWRRKQQLIITYKKRRDLFD
                     NFRKNCNNKEDIKLLNEVLSELKV"
BASE COUNT         4719 a         2134 c         2236 g         3588 t
ORIGIN      
        1 attttcctga taaaattaac gctgttaagg gatatttttc aggagcattt tctcagcttg
       61 catcggatat tattcctgca ggactggcaa caggagcatt attatgcaag aaattttcta
      121 aatttttcag tcttgcatta cttgcatacg gtataaaata tctcttctgc gatattattg
      181 acataggacg ccctaaccat ttaaaaggtg agtagcaaat ccggttattc cgttttcgca
      241 tattgcataa tcaacatttt tatcatgttg ttcaacagga atatcattga aaataagatt
      301 ttttgatata ggaacaactt ttaatgttct atctgataaa tggcaaataa atctgtcata
      361 acatcctttg ccgtatccca aacgaaaacc tcttgtatct atagcaagtg caggaataaa
      421 tatcatatct aacacggaaa aatctctaac aggcacaccg attggttcat taatattaaa
      481 agctcctttt ttaaaaccag agttttcttc atacaacaca ggataaatat tattgttttc
      541 atcaagaata ggaaaataaa aagattttgt tttatcttta acaagttgga gcaaagaaat
      601 ttctgtacct attggataaa ataacatcac atgtctggca gcccggtatt tttcccacaa
      661 caaaatttga gaacaaatgt ctcttgaaca agcttcaaca tcgagcattg aacgaataga
      721 ttttgcataa tgtcttgtat tatttttctt ctgattcata gcacaaattt attatactcc
      781 aatattgcac ttgcgattat acacctttac acatatgtaa tttaacatta taatgtataa
      841 accagattag caaaatagca ttatgaacag aaaagaatta agtaaaaagt tacgattagc
      901 caggatcgaa tcgggactaa aacaagagga aatagcagaa ttaatgaatc tgcctatttc
      961 aggtatctct gttattgaaa aaggttccag aaaagtagat gttattgaat tgctcaaatt
     1021 tgcacaatac tataacaaac ctgttgaatg gttcctttac gataaacaag atacaaatag
     1081 ccgccgttgg tatgacaaag accaaaaact tgctgaggca atcactttac ttcaaaaagc
     1141 tcctatcaag taccaaaaaa gttgtgcttg tgccataata ggattcttga aggaaagcgg
     1201 acttgttaag taatggcaca aacagacgat aataaactgt ataacccgga atttctacaa
     1261 cacggataca ttcaggttta taccggcaac ggcaaaggaa aaaccacagc ttctttaggg
     1321 ttggcaatgc gcgcactggg aagaggctgg aaagttctta tcgtcatgtt tacaaaaggc
     1381 ggaaatgact atggagaatt aatctttttc tccacacttt gtcctgaatt aaaggacaaa
     1441 gttaaaatag tacaagccgg gctggacaga atcgtatatt caacaaatat gtctgctgat
     1501 gactcaaagc agatacaaaa gggctgggaa attgcaaaaa aagcaataca aaatgatgaa
     1561 taccagctca ttattcttga tgaagcaaat atagcactgg atttaaagct cattgacctt
     1621 aatgaaatga ttgatgttct aaaaaacaaa cctgaagaaa tggaaatagt actaacagga
     1681 cgtaatgcaa aggaagaaat tattgatatt gcgcatctgg tttcggaaat taagcctgta
     1741 aaacattatt gggataaagg cattaaggca cgtaaaggaa tcgaatttta atattgctat
     1801 tttgcgatat ttgacataaa ttatatataa taatagagga tttaaggaga ataaagatat
     1861 ggctcaacag tttccgccgc agcaatacaa aacaagactt gctttactgg tgtttttaaa
     1921 aggagcttct gcccctatgg tgctctattt tgaagaccct aaagctgtat ttgatgaaat
     1981 tctaccttta ataagagttc aatcatctgt gggcaagctt attgaaaaag aagcaacagg
     2041 ccctataaag aaagtagcaa ttatgtctaa ccagatagct tcaattgctc ttcaagaaga
     2101 agtctgccag tagtaactta tacaaaagag gttaaatttt cggtatttta atgaaaatag
     2161 ttgaaatcaa aaacagttta gcaaaattat attacaaacc ttcagaatta ccgctgctat
     2221 tatctgattt tttgacaata gatgacggaa ataaaaaact actttctcaa gttgtatcta
     2281 ttgaatcaac caatacagaa agcaccaatt gtgctatttt gaaattttct ttggacatca
     2341 atgaaaataa cacctatgcg gtctatagcg gttacacacc ggctttagat gccaaaatcg
     2401 aaaaaacacc gacaaacatt atcgattctg tgttttcttc ggcatacaaa accattttga
     2461 ttggtaattt aactggttca acacaggcag aaatcaatct aaatgcatct gtaattgata
     2521 aatttctgta ccttcaatcc gaccgtattg aagatactca aaaatttatt tcaaaacttg
     2581 tcgaatttaa taatgacaac gggctaaaaa cattattaat cgacttggac ggaattgcag
     2641 agtattcaaa caccaatgtt atagagctag gcaaagagtt taagctgccc attggcaacg
     2701 aaacactaaa ttatatatac gaatatgatc ttacaggcct gactctggaa caaaaaacaa
     2761 tagttcaaga tattatactg gaaattcaag aatacataaa cactcttgag tccggattta
     2821 taccgtttaa cactttgtta gaggttgtaa acgatattta tgacagcgat aaatctaccg
     2881 gtataatttt actcagaaac aaattattaa aatacaaaca atttgatatt tttgcttcta
     2941 ctcaagaaga aattgataca cttgaattgt cattaaagaa caataatgtg acagttttga
     3001 gtatagccgg gctaaataaa aactggcaaa aagaagctgt ttacttcgca gtaaataata
     3061 taaaagaaaa ttattatttc atacttgaag caactgatga aattactgat aaacaattgt
     3121 taaataagat ttataaatct ccaaatataa aaccaattgt aagctcaaga tatgattatg
     3181 ttaatgcaaa tcttgtaaaa tcttatgcaa aaaatctggt tttattcaaa ccggaagaac
     3241 agcaaagagc atttgcaaca tacaattcct tccttatgaa attggctcaa catgagttta
     3301 ttgtttcagg agatgcaact tattatacac ctttgattat caaagaaact gcgcaaaagt
     3361 ttatacaaac aattaactca gaacctgaac ctgtgattat tacagatgca caggctgtta
     3421 ctgtagaaga tattccgcag gaagaagagg tagaggtgtt gcctgctgac tcagaggacg
     3481 atttaagcaa cattgatatc cagccgctga gtgaagacga aatcctaccg cttgaagaac
     3541 aaattgagga agagccaaac gaattaaaaa acatattcga agaatcattg gaacaagaaa
     3601 ttgccaaaga tgttgatcaa atgttttatg cggccccggc acaaactgaa gaagtctttg
     3661 agaccgagga atcgcttgaa acagaggaag aaatagaagc tttacctgaa gctcctcttg
     3721 aagaaatgat tgatacgcaa gggctatctg atgaagattt agaccttctt gacagcttga
     3781 gcggaaatga tgaagaaatt atttcaaatg aatctgaaga gttgcttcca gatattgagc
     3841 aagagcaaaa cgaacaaata ctaaacgata acaatgaatt gtctttggaa gaatcactga
     3901 tagcaatttc tgatgaagaa agtgatgaca tcagcatcaa tacagagctg ccaaacatcg
     3961 aatcatcaaa tgatttaaat ataaataacg aatttagtga acctgaaata caggaaattg
     4021 cagaagagcc ggaaatatct gagcaacaat ctattcctat atataaaaca gagctggacg
     4081 aaaacaattc tgacaacgaa aatgtaaaaa tagcagaagg aaatattgtt tatcacgaaa
     4141 aatatggcag aggagtggtc gaagaactct tcaattatgg aaaaagaaca ctttgctcaa
     4201 tacaatttga caatgtaggt agaaggctct tagacccaaa tcttgcagaa ttaaaacaaa
     4261 tgtaataaca ctgaaaacta atagacttct tttattaaat atgctaaatt tatattgaga
     4321 gataagcata tgaatccgta tttaaaacag tatagacaaa cacaaataga tacagcacct
     4381 aaagagcaaa tactattaat gctctatgat ggagcagtta gatttttaaa ccaggcaaag
     4441 gccggctttg ccgaaaaaaa tattgaaaaa attcacaaca acattgtgaa agtacaaaat
     4501 attataacag aatttgaatc tacactggat atgaaaacag gcggcgagtt tgcgcaaaat
     4561 ctttttgcgc tttacgaata tataaacaat caattattgc ttgccaacat caaaaaaaga
     4621 gaagaatgcc ttgatgaggc attaaaacac atgacagaac ttagagatac ctggagacag
     4681 gctgtaaaac agtttaaagc agcaggccac agccttgatg aaaatgatat ggatcactac
     4741 aactcccgag tgtcaacttc tgagcctgat gatgaagata atgaagatga cgacaagatg
     4801 ggagagtata tttaataatg agcatcgatt tagataatct tgaaatgact tataaaaaaa
     4861 tctacgaagt ttctgtacag attgcacagc ttattgacag acaaatttat acagagcttg
     4921 ttacttttat gagcaagaaa gaacagcttt ttaaagaagc cggaaatttg atagaaaaag
     4981 ttaaagcaaa aaatgaagat acatcaagac ttgtagaaat ttgtacaaaa atacaaaaac
     5041 aagagcaaga aaatattgtt gcactttcaa tggttcgaga cgaaataaaa aaagaacttg
     5101 gaaaaacagc aaaaannagc ttattagcgc atattcaaat gcagaactta aacagggtaa
     5161 cattttggat tacaggcaat gattattaac gctttttttc ataacaaaaa gcttgcagcg
     5221 tcactatctg ttttatcaaa ttttatttta atagtcttaa aactaattac aggttttgta
     5281 acgggtagtg taagtatcat atcagaagca atacactctg gcagcgattt tcttgcttca
     5341 attattgctc tttttgcggt gcacaaagct gaagaaccgg ctgataaaga tcatcccttt
     5401 ggccatggaa aatatgaaga tgcagccgga tttgcagaag gttgtttgat tatacttgca
     5461 tcactttaca taatatacga agcaggtctt aagctaacag gttctagcga accgcttagc
     5521 aattctactg cggggatagc ggtgatgctt gtttcagtca taacaaatat tgcagtgagc
     5581 tcataccttt ttaaagtggc taaaaataca gactccatag cgctgcactc tgatgctcag
     5641 cacctatgca ctgatatcta ttcatcactc acggttcttg tcggtcttgt cataataaaa
     5701 tatacaggac accacgttat agactctctt atagcggtta ttgtggcaat gataataatg
     5761 cacacaggtt acagaatctg caaagaaaca ctaaacgatt tactggacgg ttcgcttccg
     5821 caaaatgata ttgatttaat tcaatacaca atacaaaaca acaaccacag tgaaaatatc
     5881 tgtaaaataa aagatataaa aaccagaaaa tcaggcaaaa ataaagatat tgttataaca
     5941 cttattgttg atggttcaat gacggtagct caagcacaca aattgtgtga caaactggaa
     6001 tgtgaaatag aaaacgcgct cggaaacacc aaaataatca tccatgtaga accacaaaca
     6061 gaacataacc tttcttgcca aaacaatgac atataagtac aattaagcta tgagcagaaa
     6121 aaaattacta ttacttttta tattatcttt tttatgcgta atatttacgc tgaataatat
     6181 ctgctacaaa cattttgaca acaaactgga tactatcatt acacaaaaca gactcaaaac
     6241 aactgataca caggtaatta acaacatcct tgagcaaaat aaagtcataa ttatttcgga
     6301 acatacaagg ctggtgctca ctttaggcac atctgtttta tttctcgcgg tatttgtgtt
     6361 ttatgaaaca atcccggcaa ttgtgttcat tataatcttc ctgattgcat atttaattgc
     6421 ctacaagctg ctgcttaata attttgtata cataaacata gcaggaataa tcatcagcgc
     6481 tgctgtatca aagctttatg caggggcata tattcatctt tttaaagaga atgtcgacaa
     6541 aaaaatcgag aacgtacttg gcaaatacat ttcaaaagat ataactaata aaattctgaa
     6601 aaacaaggca ggcgcagagc ttggaggaaa acgctctgaa ataactgtaa tgtttgctga
     6661 catcagaggc tttacgtcac tttctgaaag ccacaaggca gaggaagtgt cacagctttt
     6721 aaacgaatat tttacagaac ttgagcctat tattacaaag tacaatggcg tcataaacaa
     6781 atttataggc gacgctgtgc ttgtagtttt cggtgacccg acacaggata agctgcatgc
     6841 aaaaaatgca gtaaaatgcg catacgaatt gagaaaaaaa gttaaacaaa taaagcaaag
     6901 atggctggaa gaaggcaaac ccaaaataga cataggtata ggaataaata caggagaagc
     6961 ctttatcggc aatgtcggta caaaaaacag gtttgaatat actgttatcg gggatactgt
     7021 taatattgcc agcagaatcg aagactacaa taaaatttat aaaacacata ttctaattag
     7081 cgaaaataca tataataaga tttcacaaat agtagatgta ataaagattc gtgaagtttc
     7141 aataaaaggc aaaagcaaaa aaatcaatat ctacgaagta ctcagaatta cggaataatg
     7201 attgaaaaca tagaacagat acgacaggct attgaggttg agcaaaaaaa tcaatatatt
     7261 gatataagag gaagacacga tacattttcc gggttcatat taaaacaact gcacaacctt
     7321 tataaaaaat caaaaaaaaa tcccaaatgg atacttttga taaaagagtt tgaaacatat
     7381 gcaatttctt ctatgcccac aagacgaaaa gctgtacaaa gactcatagt aacgctaaag
     7441 caggagatta cacaggaagg cgatgtaaaa aaaacagatt tgtcggttat tacaaaagac
     7501 ccgtctaaaa ctgatgtaat gtatgtaaaa ggagtaggcc ctaaagttgg aaacctgctc
     7561 aacaaacttg gtatctacac ggcaagagat ttgttatttt attttcccaa aaggcatatt
     7621 gattactcat caagaaccct aatcagagag ctcaaagaag gcaaagatgc aacaattata
     7681 gggacaatca aatcaataag cgcatataac tcaaaaaaca atctgggcat aatctctgtt
     7741 actattgctg atgaaacagg cgttgtaaaa cttagtttct tttatgcaaa agcaaacaga
     7801 tttttgcttg aaagatacaa atcacaattc ctgaaaggtt ctaatataat agtttcagga
     7861 aaagcaaaaa tagacaaatt ttcaggcact tatacaatag aaaaacccga atttcaggtt
     7921 ctctcagggg agtttgaagg caaaaataac ctcaatttgg caagaattgt acctgtttat
     7981 caactatcag aaggtttaaa tataaaaaca ctgagaagag caatttttaa cgcaatagag
     8041 cagtttgaac ctgtcataaa aaatgtgatt cctgattata taatggcaag gaacaatctg
     8101 cttgacagaa acaaagctat cagacaaatt catttccctg aaaatgaaga aatgctggaa
     8161 aaagcaagat acacccttgt gtttgaagag tttttccttt tgcagctaaa actggcaatg
     8221 ctcagagaag aaaattcaca aaaaataaaa gctctaccac taaaaataaa aaaagacgga
     8281 ctggtaaaaa aattccttga atcattgccg tttgaattaa ccaatgcgca agataaagcg
     8341 ctaaaagaaa ttttaagaga cattgcatct gacacaccaa tgcaaagact tttgcaagga
     8401 gatgttggca gcggaaaaac agtggtatcc tgtgcaatgt tgttatctgc ggtagaaaac
     8461 ggctatcagg gtgtattaat ggctccgaca gaaattttgg cccagcagca ttttaacaac
     8521 tttgtacgct ggttaacgcc gtttggattg agcataggtt tattcacagg tacaaacggt
     8581 gtaaaagtcc gtagaaagct cgagactgac ctcaaaaacg gacaaattaa tatagcaatc
     8641 gggacacatg cccttataca aaacaatgta gagtttaaaa atttaggcgc aattgtaatt
     8701 gatgagcagc acagatttgg tgtaaaacaa cgttctcagc ttatgacaaa aggcaaaaat
     8761 ccgcaggttc ttacaatgac agccacgcct atacccagaa cacttgcttt gacaacgcaa
     8821 ggagaccttg atttttccgt gattgatgaa atgcccaaaa acagaaaacc aataaaaacc
     8881 tatgtaataa aaccgtcaca acgcacacaa gcttacaaaa tattatcaaa tgaaattgca
     8941 aacggtcatc agtgctatat tgtttatccg ctcattgatg agagcgaaac cctatccgcc
     9001 aaagcagcta ctaatgaagc cgaaagatta aaagcagaag tctttcctga ccttaacata
     9061 ggcctcttgc acggaaaact ctccaatgcg gaaaaagatg cagtaatgga aaaattcaaa
     9121 aacaaagaat acgacattct tgttagcaca actgttgtag aagttggagt tgacgttcca
     9181 aattcaacag taatgatgat agaaaatgca gagcgttttg gcttgtccca gcttcaccag
     9241 ctaagaggaa gggttggcag atcagatttg cagtcttatt gcatacttgt acctgcaaac
     9301 tcaagccaaa caactatgga taggttgcaa ataatggaac agacaaacaa cggttttatt
     9361 atttcagaaa aagaccttga attacgagga cccggagaat ttcttggcac aagacaaagc
     9421 gggatggtta attttctact tgcagatatt ataaaagata cgaaaatttt agagaaagcc
     9481 cgtgaggaag cattcgaact cgtaaaaaat attaatgatg aaacagggaa ggctgctgta
     9541 ccaaaagcat tagcgcagga gctggatgaa aaatttagaa caatcccaga tctctcaaca
     9601 cttgattaga gcgagaagct gaagagctgt tgattgagtc tttcatttgc acaatgtatt
     9661 cggcgtcagc atatttttgc tttgccctta catagttctc tgcgttgttt cgaggtagca
     9721 agctccgtaa gcggaaactt acgtcaatgt tgttgatttt cattctcttc gagaccccaa
     9781 tttctaggtt cgttattata gtttacagtg gaaagtgata ttaaaaaata ttggtgtata
     9841 ataatataaa ccataaaaaa aaaaatacaa gggagaattg cttaaaaatg gcagacaaaa
     9901 ttattatact atccggaaaa caatacagcg gtaaggatac agtcgcaaaa atactgttac
     9961 aaaacttaac aaacttcaaa agaataggtc ttggcgacgc aataaagtta gaatattctg
    10021 aaaaaacagg cataccgttt gaagaaattg aaaaaaataa acacctatac aggcaggatt
    10081 taattaatct tggtaatcaa agaagaagcg aggataaaaa ctactggata aaaaaagtaa
    10141 tacaaatgcc aggcaacatc atagtgccgg atgtaagagt aaaaagagag ctggaatttt
    10201 ttaaagaagc tgatgcatat aaaatcagag ttgatgcatc aagagaaaca agaagtgagc
    10261 gcggacaact tgttggagaa acagatgtaa cagaagttga tctggatgat gtaaaagaat
    10321 gggactatgt tatctctaac aactctacat atgaaaattt gcaagcagaa tcaatcaaac
    10381 ttgcaaaaga aataaagagt tttttagctg ggaaataagg ttaaggaaaa ttaattgtaa
    10441 tttttgatgt aatcacctac acaaaaatct ccgtatttaa aagtatacgg ctggtgattg
    10501 tactctggtg ttttataaag attgctgctg gcaatcatga atattttgtt gtgcgaaaat
    10561 aaaaacgcat tcatctcaga atattcacac ataagctctt caagttcatt taccccttcg
    10621 ataattttgt ttaacacttc gcacatcctt attaattatc ttttaacttc acattaaatt
    10681 tatcggcaaa ttgttgcact aactttagaa atacggttga atctttaaca tatttttaca
    10741 aatatgttat attagataaa cgaacggaga aattatgaac aaaaaaatta taataggcag
    10801 tgaccacgcg ggatttattt taaagaataa attggcagca tatttgcaac aagcaggttt
    10861 tgatgttgat gatgcaggta catatactac agaatcttgc gattacccga taattgcaaa
    10921 agaagttgca caaaatataa aagaaggtaa atacgaaaaa ggcatactcg tttgcggcac
    10981 aggaatcggc atgtcaattg cagccaacaa agtaaaaggc ataagagcag cagttgtatc
    11041 ggatacttgc tctgccaaaa tgtcacgttt gcataatgat gccaatattc tatgccttgg
    11101 cgaaagaatt gtgggtgaag aactcgctaa agacattgct gaaatatggc ttaaaacacc
    11161 ttttcttggc gaaagacatt ccagacgcgt tgaaatgttt gaacaggatt aagaagaaat
    11221 cttgctaact gccagatcaa cgcttgtata agtaggtatt aaagtatcaa gaaaagcgtc
    11281 agcgagtgct gattttacag aatctgaaat tttaacaagc ataaattttc cgcctttatc
    11341 attgcacatt ttatagaggc ttgtgaacac gcttgtgtat tcatcatcaa atatcttaac
    11401 gttttccatg ttaaaaataa tatttgaaaa accggtataa agacttgttg taacatcttt
    11461 aacaatcaaa tcaatatgtc tctggctgtt gaatttattt attgtatagc agcagatatt
    11521 gtcattgatt gagtatttaa agaaatcttc atgctgtttt gaagtcaaag agcttgttat
    11581 aaatttcagt atttggtcat gccaattact gcttttgggc acaaactcat caatgccgag
    11641 tttgtagcat ttttcaatca ggtctttgtc atcagtaccg gacattacaa ttattttgtt
    11701 tgttcttttt gcatctctga gtttaataca ctcttcaatg agctcaatac cgtcttgtgc
    11761 atcaggcaag aacaagtcta caacaatata atcaaacttt ttctttttga gctcagctaa
    11821 tgcttccact ttgttgcgag caacagttgg gacaataccg acctttttca aaagctggtt
    11881 aaactgataa atagaaagct cgaggtcatc tacaattaat atattgaact ctgcaggtac
    11941 tgtcatggct tcgttagaca gtaatgacaa aaatttgcgt tctattaaaa taagcgcctt
    12001 gtttatatca tcagtagtag cagacaaaac atccgcatcc aatcctgata aatcaaataa
    12061 cttttttagt tgctcattat ttatttccat aagccctgaa cctaaattat gtatctaata
    12121 aattttacac ttttaattct gataaaacct cattcaaaag ttttatatcc tctttattat
    12181 tgcaattttt tctaaaatta tcaaataaat cacgtctttt cttatatgta attatgagtt
    12241 gctgctttct gcgccatcta tttatttgtg catggtttcc gccaagcagt acctcgggta
    12301 cacataaacc gttatattca cgcggttttg tatattgagg atgctccaaa agcccgtctg
    12361 aaaaggaatc gtaatgagcg gaatcaattt ttcctaaaaa gccctcaata tttcgtgaaa
    12421 cagaatctat aatacacata gcaggcagct caccgccggt gagtacataa tcaccaatag
    12481 aaacctctct cgcttttgta tattgcttaa ttctctcgtc aaaaccctca taatgaccgc
    12541 aaataagtat aatatgagat ttttgggcaa gctcgcatga catttgttga ttaaaaacct
    12601 ctccttgagg agaaagtata ataacctctg tatcttctga tttttggatt gaatcaaaac
    12661 aatcaaaata tggctgaca
//
LOCUS       DABS01000203            3664 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_8639, whole genome shotgun sequence.
ACCESSION   DABS01000203 DABS01000000
VERSION     DABS01000203.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3664)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3664)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3664
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..741
                     /locus_tag="CPT85_09330"
     CDS             <1..741
                     /locus_tag="CPT85_09330"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20664.1"
                     /translation="GYDIGRQLVSFVIAKYGAMGANTFSVKVDESHEELLELFSKGCG
                     FRACSSEQLWKMEEIKLSTPSLEKGFFRPFKNSDASVVAGIYNELIYPHFRYSLAKNP
                     REFENVLCSGLHDTSFFRYVIEDRSKHSIKGYFSIQTDDNENFILNVDLVSAFDEYLS
                     DVINFSISQIMMRKRVFNLYFRNKKYQTSGTKTEKYLKENGFKNIKNQIVLVKDYYKR
                     VQEDERYSKPAIAFSEITRKPAFKSTLD"
     gene            complement(749..1357)
                     /locus_tag="CPT85_09335"
     CDS             complement(749..1357)
                     /locus_tag="CPT85_09335"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20665.1"
                     /translation="MTQLRIKDLLGRANFILDKGFHFLPGFVMVKSSEMEAILDRIDA
                     SIPEDIKEAESILRRREEIQIEAQQRAERIIMEAKAEAEKILSESELLNQVQREAEKI
                     KEQVLTECQELREKTIEEAKQIKIQAEDEAHRTKEGAENYAEQILNNIENDLSQLHTI
                     VKNGQLYLEKLRTSGSTASYAQDQSQYREXEEEDYTSANYPM"
     assembly_gap    789..790
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1367..1858)
                     /locus_tag="CPT85_09340"
     CDS             complement(1367..1858)
                     /locus_tag="CPT85_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009330921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="DAB20666.1"
                     /translation="MGKTAIYPGSFDPVTKGHLDVLAKASKMFGKVIIAVLKNDSKKG
                     FLPTADRVALIQEAVKEMGLDNVEVDSFDGLTIEYAKKVGSDILIRGLRAVSDFEYEM
                     QLSQTNNALAPSVTTVFLITKPKYNFISSSTVKEIAKYNGDISKFVPESVVKYFKNIT
                     NER"
     gene            2085..3371
                     /locus_tag="CPT85_09345"
     CDS             2085..3371
                     /locus_tag="CPT85_09345"
                     /inference="COORDINATES: protein motif:HMM:PF13641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20667.1"
                     /translation="MSTFWAILILCGLMSLYCIYMQIALKHQKIKLKKQPEELNWNYK
                     PFVSVMIPAHNEQDVIEKTVENVLAMDYEKFEIFIIDDRSEDNTAEKLKELEQKYENV
                     HAYIRAKDAFPGKSAVLNEVLPLTKGEAILVFDADARVKPDFLTNLIPHLEKDNVGAV
                     QARKVIINRDENFLTRCQDNEYALDTHFQVSRNCIKGAVELRGNGELLKREALLDING
                     WNNYTITDDLDMSTRLHIKGWDVRFCPDVCVYEEAVVKFIPLLKQRRRWVEGSIRRYL
                     EHFWGVLFSKDMSLRVSIDMIAYITEFILPFWMISEICFQAFKYVKESPNCISSSLLV
                     SIVVCGFFTTGLLYSIRKYNHQSRFQSVIQAVQTGVFLCTVWFPIVVFIVFKIIFFPK
                     TMDWGKTTHGVTKIEEDINAVDAQNNEDDTAKEQTV"
     gene            3373..>3664
                     /locus_tag="CPT85_09350"
     CDS             3373..>3664
                     /locus_tag="CPT85_09350"
                     /inference="COORDINATES: protein motif:HMM:PF01938.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil-5-)-methyltransferase RumA"
                     /protein_id="DAB20668.1"
                     /translation="MFKCSDIVELSPDKAVYEGDALAKIEGFPVFVQGGCPGDRLKVK
                     IVKANKNYANAVIEEILEPSPHRVKPFCPLHNVCGGCGWQHMDYEFQLEQKRN"
BASE COUNT         1077 a          704 c          739 g         1142 t
ORIGIN      
        1 ggctacgata tcggacgcca gctcgtgagc tttgttattg caaaatacgg agccatgggc
       61 gcaaacactt tcagtgtaaa ggttgatgaa agccatgagg agcttttgga gctgttttcc
      121 aaaggctgcg gttttcgtgc ttgctcgtca gagcagctgt ggaaaatgga ggagataaaa
      181 ctctcgactc cgtctttgga gaaagggttt tttagaccct ttaaaaactc tgatgcgtct
      241 gttgttgcag gtatttataa tgagttgatt tatcctcatt tcagatattc gcttgcgaaa
      301 aacccccgcg agtttgaaaa cgtattatgc agcggtctgc acgacacttc ttttttccga
      361 tatgtaatag aagaccgctc aaaacactct atcaaaggct atttctccat acaaaccgat
      421 gacaatgaaa actttattct caatgttgat ttagttagtg cgtttgatga gtatttgagt
      481 gatgtaatca atttttctat aagccagatt atgatgagaa aaagagtgtt taatctgtat
      541 tttagaaaca aaaaatacca gacaagcggc accaaaacag aaaaatactt gaaagaaaac
      601 ggatttaaga acatcaaaaa tcagattgtg cttgtaaaag actattacaa acgcgtgcag
      661 gaagacgaaa ggtattcaaa acctgccata gcgttttcag aaatcacaag aaaaccagct
      721 tttaaaagca cactggatta accggctgct acatagggta gtttgctgat gtgtagtctt
      781 cttcttctnn ttctctgtat tgagactggt cttgcgcata agacgcagtg ctgcctgatg
      841 ttctcaattt ttcgagatac aactgcccgt ttttaactat tgtatgaagc tgtgacaaat
      901 cgttttcgat attgttaagg atttgttcgg catagttttc agctccttct tttgttctgt
      961 gggcttcgtc ttctgcctga attttgattt gttttgcttc ttctattgtt ttttctctga
     1021 gctcctgaca ctctgtaaga acctgttctt tgattttttc agcttctctt tgaacctgat
     1081 tcaacaattc agactcgctt aaaatctttt ctgcttcggc ttttgcttcc atgataattc
     1141 tttcagctct ttgctgggct tctatctgga tttcttcgcg tcttctcagg atagattccg
     1201 cttcttttat atcctccggg atagaggcgt caattctatc gagaattgct tccatttcag
     1261 agctttttac catgacaaaa ccgggaagaa aatgaaaacc tttgtctaat ataaaattgg
     1321 ctcttcctaa taaatctttg attctaagtt gtgtcatatc agatacttac ctttcgttag
     1381 ttatattttt aaaatatttt accacacttt cgggaacaaa tttagaaata tctccgttgt
     1441 attttgcaat ttctttgaca gtgctggagg aaataaaatt gtacttgggt tttgtaatca
     1501 aaaaaactgt tgttacagac ggagcaagcg cgttgtttgt ttgcgaaagc tgcatttcgt
     1561 attcaaaatc cgatactgct ctcagtcccc tgattaaaat atcagagccg actttttttg
     1621 catattcgat agtcagaccg tcaaagctgt ccacctcgac attatccagt cccatttctt
     1681 taactgcttc ttgtataaga gctactctgt ctgctgtggg taaaaagcct tttttggaat
     1741 cgttttttaa cactgcaata ataaccttgc caaacatttt ggaggctttg gcaagaacat
     1801 ctaaatgtcc ttttgttacc gggtcaaaac ttccggggta tattgccgtc tttcccattc
     1861 acttttttcc gtatatgtag tactacagta taattatata atcgtaaatt taaaaatatt
     1921 gcgattttga agagaattgt ttattattgt tacaaattta aaaaattttt ttggtataat
     1981 gttgtcagcg aaagattttt gagggactgg gtttgattga gagaatagtt ttaacaatat
     2041 taatcgcctc actctggctt tttctattta ttttccagaa ctttatgtct acattctggg
     2101 caattttaat tttgtgcggt ttgatgtcgc tttactgcat ttatatgcag attgcactta
     2161 aacaccaaaa aattaaactg aaaaaacagc ccgaagaact caactggaac tacaaaccat
     2221 tcgtgtctgt gatgattccc gcacacaatg agcaggatgt tattgaaaaa actgttgaaa
     2281 atgtgctggc aatggattat gaaaaatttg aaatttttat aatcgatgac agaagcgaag
     2341 acaacacagc agaaaaacta aaagaacttg agcaaaaata cgaaaacgtc cacgcataca
     2401 tccgtgcaaa agacgctttc cccggaaaat cagccgtact taacgaagtg ctgcccctca
     2461 caaaaggcga agccatcctc gtgtttgatg ctgatgcaag ggtcaagccc gactttttaa
     2521 caaaccttat cccccacctt gaaaaagaca acgtgggtgc tgttcaggca agaaaggtta
     2581 ttataaacag agacgaaaat ttcctgaccc gctgtcagga taacgaatac gcacttgata
     2641 cacattttca ggtcagccgt aactgcataa aaggtgcagt ggagttgaga ggcaacggcg
     2701 agctgctcaa aagagaagcg ctgcttgata tcaacggctg gaataactac acaatcacag
     2761 acgaccttga tatgtcgaca cgccttcata taaaaggctg ggacgttcgt ttttgtcctg
     2821 atgtttgtgt ttatgaagaa gcagttgtca agtttatccc gcttttaaaa cagagaagaa
     2881 gatgggttga aggcagcata agaagatacc tcgagcattt ctggggcgtg cttttttcaa
     2941 aagacatgtc gcttcgtgtg agcattgaca tgattgctta catcacagag tttatactgc
     3001 ccttctggat gatttcagag atttgttttc aggcgttcaa atacgtgaaa gaatcaccca
     3061 actgtatctc ttcatcactg cttgtttcta ttgtggtgtg cggattcttt acaacagggc
     3121 ttttgtacag tatcagaaaa tacaatcacc aatccagatt ccagagtgta atacaggctg
     3181 tgcagacagg tgttttcctt tgcacggtat ggttcccgat tgtagtattt attgtgttta
     3241 aaataatttt cttcccaaaa acaatggact ggggcaaaac aacacacggc gtgacaaaaa
     3301 ttgaggaaga tatcaacgct gtggatgcac aaaataacga agacgacaca gcaaaagagc
     3361 agacggtata atatgtttaa atgctctgat attgttgaac tttcacctga taaagccgta
     3421 tacgaagggg acgctcttgc aaaaattgaa ggatttccgg tgtttgtaca aggcggctgc
     3481 ccgggcgaca ggcttaaggt aaaaattgtt aaagctaaca aaaactacgc aaacgcggtt
     3541 atcgaagaaa ttcttgaacc ttcgccgcac agggtaaaac ccttttgtcc gctgcacaac
     3601 gtttgcggag ggtgcggctg gcagcatatg gattacgaat tccagctgga acagaaaaga
     3661 aaca
//
LOCUS       DABS01000204            3943 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_23417, whole genome shotgun sequence.
ACCESSION   DABS01000204 DABS01000000
VERSION     DABS01000204.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3943)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3943)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3943
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..544)
                     /locus_tag="CPT85_09355"
     CDS             complement(<1..544)
                     /locus_tag="CPT85_09355"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20657.1"
                     /translation="MLSQKIYSQKYAFTLAEALLTLVILGVVAALTVPGLKKHTDRQT
                     LATQLKNGYSTLNKSLDYAYALDDSIDISKIGGDVFFTTHMMPNMNIATSCNESNMSK
                     CIAGDATGLPFTAKNAVVLTGGFTIANNGFDFLIDANGTNEPNQFDVDIYQYKLSQES
                     IAPESSEDSSADDSSDDGEKN"
     assembly_gap    696..698
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    856..900
                     /estimated_length=45
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            972..2150
                     /locus_tag="CPT85_09360"
     CDS             972..2150
                     /locus_tag="CPT85_09360"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20658.1"
                     /translation="MKEIAFIASTTQEFALTRGCSNQCAHCYVDAKPHLHLKKDEKKY
                     INAMSWEDFESLTKGIVTLNNRLGFHITKPISDKTNYIAPFHDADCMEIVLKDKHGEE
                     HDLTEIIPMLYYSTGKQVLFDTSGWNPKDKRIQQRAQKYVKFFSKPENMQYIHFFNVS
                     LNPFHALNAKSVELKNTDENRAKKFKELYTERMANVFYTFTPLIDKKKFDIIARCATK
                     SAATNNEFKEKNFRILIAEIENKLKQKYEQDLEHKPSFIQTLLQTPKSQNPRMIKTKS
                     QMQKIIKEIERKTNYLDSGILALGRMQKLLDKEDNSLKIVKFRQEHSLAARKLNLKNN
                     IYTATIDANGKVYLTDEYTILPTALQLNFENKNKKTTPMESGMQNVVLTRKMIKKTRD
                     "
     gene            complement(2224..2736)
                     /locus_tag="CPT85_09365"
     CDS             complement(2224..2736)
                     /locus_tag="CPT85_09365"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20659.1"
                     /translation="MGIKSIAQTAFKDKEGAHFVVNLNNGDKGVYTVARGKNTTRQSL
                     SSNGKVVEYTTKKFPELGWEVYSKKVGDYVTIPQTQSLSYVKEQGKITGAANYKRTPI
                     NEKTYIDPATGQVRHKAFVLQELHADKYTGKFILPEDKLVAADGSKFLPIYQRPMTGG
                     EPQVTKVWNM"
     gene            complement(3034..3149)
                     /gene="rrf"
                     /locus_tag="CPT85_09370"
     rRNA            complement(3034..3149)
                     /gene="rrf"
                     /locus_tag="CPT85_09370"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(3337..>3943)
                     /locus_tag="CPT85_09375"
     rRNA            complement(3337..>3943)
                     /locus_tag="CPT85_09375"
                     /product="23S ribosomal RNA"
BASE COUNT         1330 a          812 c          646 g         1105 t
ORIGIN      
        1 tattcttttc accatcatct gatgaatcat cagcggatga gtcttctgat gattcaggag
       61 caatgctttc ttgagataat ttgtactgat aaatatcaac atcgaactga ttaggttcat
      121 ttgttccgtt tgcatcaata agaaaatcaa aaccgttatt tgctatagtg aatccgcctg
      181 ttagcacaac cgcattttta gcagtaaaag gaagacctgt cgcgtcaccc gctatacatt
      241 ttgacatatt gctctcatta caagacgtag caatattcat attcggcatc atatgtgttg
      301 taaaaaacac atcaccgcca attttggaaa tatcgataga gtcatctaaa gcataggcat
      361 aatcaagaga tttatttaac gtactataac cattttttaa ttgtgttgcc aatgtttgac
      421 ggtctgtatg ttttttcagc ccgggtacag tcaaagctgc aaccactccc aaaattacaa
      481 gggtaagcaa agcttcggca agcgtaaaag cgtatttttg tgaatatatt ttttgtgaca
      541 acatatacaa tccttttcta attaatgtac caataaatac aaaataccac tgccggcttt
      601 aaacataaca cccctaaaca atcgagattt acaataggtt acaatcacgc aacaaatagc
      661 aaaattatac cttaacaaac ttatataaat atgagnnngc aaaacaacta ccttaaatac
      721 aagaaataaa acaaataaaa catcacttac caacacaaat aaaatagtgc aaagccgtat
      781 tttttcagaa aattataggc cgcttagttt taaaagttta agagagtaca aatatcaaaa
      841 agcaaaaaag tatctnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      901 acatagacaa ttttgatcta aaaaagcttg aaggtatcca aaagggaata aaagtatttg
      961 acgggctaac tatgaaagaa attgccttta ttgcttcaac aacacaagaa tttgctctta
     1021 caagaggctg ttccaaccaa tgcgcacact gttatgttga tgcaaagcct catttacatc
     1081 taaaaaagga cgaaaaaaaa tatataaacg caatgagctg ggaagatttt gagtctctta
     1141 caaaggggat tgtgacatta aacaatagac tgggctttca tattacaaaa ccaataagcg
     1201 ataaaactaa ctacattgca ccttttcacg atgcagattg tatggaaatt gtactcaaag
     1261 acaaacatgg tgaagaacac gacctaaccg aaatcattcc gatgttgtat tactctacag
     1321 gtaaacaagt gctttttgac acatccggct ggaacccaaa agataaaagg attcagcaac
     1381 gtgcacaaaa gtatgtaaag tttttttcaa aacctgaaaa tatgcaatac attcactttt
     1441 ttaatgtttc tttaaaccca ttccatgcac ttaatgcaaa atcagtagag cttaaaaata
     1501 cagatgaaaa tagggcaaaa aaattcaaag aactgtatac agaacgaatg gcaaatgttt
     1561 tctacacatt cacaccgctt attgacaaaa agaaatttga cataattgct cgctgtgcaa
     1621 caaagtcagc cgcgacaaat aatgaattca aagaaaaaaa tttcaggata cttatagcag
     1681 aaattgaaaa caagctaaaa caaaaatatg agcaagattt agagcataaa ccatctttta
     1741 tacaaacctt actgcaaaca ccaaaatcac aaaatccgag aatgattaaa acaaaatcac
     1801 aaatgcaaaa gatcataaaa gagattgaga gaaaaactaa ttacttagat tctggtattt
     1861 tagctcttgg acgtatgcaa aagctgctgg ataaagaaga taatagcctg aaaattgtaa
     1921 aattccgcca agaacatagt ttagcggcaa ggaaattgaa tcttaaaaat aatatttata
     1981 cagcaacaat agatgcaaac ggaaaagttt acctaacaga cgaatacact atcttgccta
     2041 ctgcattgca attgaatttt gaaaacaaaa ataaaaaaac aacaccaatg gaatcaggaa
     2101 tgcagaatgt tgtcttgaca agaaaaatga ttaaaaaaac gcgggattga gaataaatat
     2161 ttgcaattcg tcaataaaag ggccactgaa gttatttcaa tggcctttaa aaaattttaa
     2221 atattacatg ttccaaacct tggtgacctg tggctctccg cctgtcatcg gtctttgata
     2281 aataggtaag aatttactgc catctgccgc aactagttta tcctcaggca atataaattt
     2341 accggtgtat ttatcagcat gcagctcttg caaaacaaat gctttatgtc ttacttgacc
     2401 tgttgcggga tcaatataag ttttttcatt aatcggcgtt cttttgtaat ttgctgcacc
     2461 tgtaattttg ccctgttcct taacatatga taaactttgc gtttgcggga ttgtaacata
     2521 atctccgact ttttttgaat acacctccca gcccagctct ggaaacttct ttgttgtgta
     2581 ttcaaccact ttaccatttg atgataaact ctggcgggta gtatttttcc cgcgagcaac
     2641 agtgtatacc cctttatcgc cattattcaa attgacaaca aaatgtgcac cttctttgtc
     2701 tttgaatgca gtctgtgcaa ttgacttaat tcccaaacct tctgcctata aaattttacc
     2761 aaaacttgaa atgtttctaa tcataaccaa aatcctttcc taacttgtct ttctaacctt
     2821 actcatttaa aaaaacagtc cgaaaataaa aattgacata actcaccgtc acttatctta
     2881 tcttacagaa aagcttacag ggcttggatt tcaaggtcaa aaaacttaac cttacatttc
     2941 ttaataaaac gagaaaataa taaaaagcaa aacctaagca acaaaaaaga gcttctgaaa
     3001 taaattcaaa aactcttttt tgctaaaatt agaatctggc aactagctat cttcccaggc
     3061 ggtcatccgc caagtagttt cgccgcaagc tgtctttacg accgtgttcg ggatgggaac
     3121 gggtgggatc cagccgcttg gtcaccagaa aaactgttat gattggattt tgtaagaaac
     3181 actccaatca ttacggtttc ttgaccgtac actgaaagct acatagtaat tataagctta
     3241 gcatatgcta aacgcaatct caactttttc ctacggaaat gagttacatt gccgaaaact
     3301 caacgtttcc gtcaattaca ctcctgctcc gcattctagg aaaagccctc gtcctattag
     3361 taatgctcga ctacatatgt tgccatactt ctatctgcat cctatcaacc acgtgatctg
     3421 catggggact taccagatta ctctgtgaga gaactcatct ttcggtgggc ttcgtactta
     3481 tatgctttca gcacttatcc gcttggaaca cagctaccgg gcgtttaccg ctggcgcgat
     3541 aacccgtaca ctggaggttc cctcttcccg gtcctctcgt actaaggaag actccgatca
     3601 attctcttgc gcgcataccg gatatggacc gaactgtctc acgacgttct gaacccagct
     3661 cgcgtgccgc tttaatgggc gaacagccca mcccttggga ccgactacag ccccaggatg
     3721 cgaygagccg acatcgaggt gccaaacctc cccgtcgatg tggactcttg ggggagataa
     3781 gcctgttatc cctatggtaa cttttatccg atgagcgatg gcccttccat tcgggaccac
     3841 cggatcacta agtcctgctt tcgcacctgc tcgacttgta ggtctcacag tcaagctccc
     3901 ttgtgccttt acactctgca aatgatttcc aaccattctg agg
//
LOCUS       DABS01000205           10591 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_543, whole genome shotgun sequence.
ACCESSION   DABS01000205 DABS01000000
VERSION     DABS01000205.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10591)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10591)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10591
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..535)
                     /locus_tag="CPT85_09380"
     CDS             complement(<1..535)
                     /locus_tag="CPT85_09380"
                     /inference="COORDINATES: protein motif:HMM:PF01134.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="DAB20635.1"
                     /translation="MDYRVKVIGAGLAGCEAALQLAQNGVAVDLYEMRPNKTTGAHST
                     QNPAEFVCSNSLGSIDPTNASGLLKQEMSILGSFLIQVAHEVKVPAGNALAIDRELFS
                     QKVEQLLQEHNINIIRXREEVKTIPQEGPVILASGPLTSADLAEDIKSFTGSEHLHFF
                     DAIAPIVEKDSINFDKAF"
     assembly_gap    179..180
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(535..1539)
                     /locus_tag="CPT85_09385"
     CDS             complement(535..1539)
                     /locus_tag="CPT85_09385"
                     /inference="COORDINATES: protein motif:HMM:PF01966.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20636.1"
                     /translation="MEKIPVEELVKYKMLPFDLYNENGEKLVDAGEILTSGKLLQISQ
                     YDVLFKSTPKHTESRPTTHMAPAAPVAPMEEESFEPAKPKEIVFDKTVNRKSKFKAQS
                     QVDMKSYYATTMFALRENANKDAIQMVDEIKDKILDDVQSVIQEVKFCSQLKLLGNYN
                     DCHALNTAILATAMGYKLEYDEDVIEKLAQASLLHDIGMTRLPKEILEKTSLSQQDNK
                     LFQKHTQMGYKILKYEMGLPEDICLVALEHHENNDGSGYPFKLSGEQISKLTRVVGLC
                     SFFDDLTSNRTVHKVKNTKEALRIMLEVGTKKFFPELLYQFVNMFNYNDLESYDEMIQ
                     "
     assembly_gap    1586..1587
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1668..2351
                     /locus_tag="CPT85_09390"
     CDS             1668..2351
                     /locus_tag="CPT85_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005546829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="DAB20637.1"
                     /translation="MNSTKIKYIGHSAFYFETGSHGILVDPFISNNPVAKFNYKEEII
                     TDIFLTHAHADHMGDAIPISRATKAPITAIFELANYCMAKGALVEGVNFGGKLSYPWG
                     FARFLPAFHSSSTPDGQYAGMPASIMFEINGTKIYHAGDTCLNSEMKTAGEVYKPDIA
                     FLPVGSFYTMDKNEAALAAKWLGVKKVIPMHYNTFDAIKTDIQEFKNMIEKEGIECII
                     LKPGESLEL"
     gene            2351..3361
                     /locus_tag="CPT85_09395"
     CDS             2351..3361
                     /locus_tag="CPT85_09395"
                     /inference="COORDINATES: protein motif:HMM:PF11805.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20638.1"
                     /translation="MQKNIAKQKISLMIVPTGTGASIGGYAGDASVYAQKIARHIPLI
                     VNPNIVNAAVFSGITANMYYVEGYFIEQFVKGEIGLLPSKNNKIGVIFDRAISKNVLN
                     IHINTINAMKTVYGIDITGYEITDETADVEFFTTDSGISSGCVKNPTTLKKAGQKLIK
                     KGAQTIAVVCKFAEPPQDEYEKGNGVDIVGGVEAIISHYLSKELMCPCVHAPAFEDVT
                     IDGNIVDEKVSAEYITPTFLPCLLTGLRNAPLIVKKENITPECITYKNLHSVCVPYNA
                     LGSSVVLDCIEKDIPVYAILENKTVLNIDKTSINKTIAIKEIATYDDYINIIKEIEYE
                     KS"
     gene            3348..4304
                     /locus_tag="CPT85_09400"
     CDS             3348..4304
                     /locus_tag="CPT85_09400"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20639.1"
                     /translation="MKNLKAFSIPELLIVIGITGVICAMMLTVVKPTDKYLPYAYYNA
                     YYTLATAAYNIKEDARDLQNTEGAEDVDKAFPGDMENVDSTTAAKELCRKLATNPNPA
                     NEEENKLGYLNTTVYNCGANFKTVPIKGSDSDFKKENMAFRSSNSMRYFISPMQKVTV
                     KDPLNGNADVELKYFLVWVDLNAERGPNTATWNSNKKKAIDIVPFIILMDGTVLPTGF
                     PTTDSRYLTAHVQYSASNTEQFSQSPRPYYDSVIAAFNKNEYPVHDVYSLFSSFQKAL
                     KGTAAEIKSYTPSVTGFDEKCTLESVNDAPICTIVIDEKKKF"
     gene            complement(4301..5917)
                     /locus_tag="CPT85_09405"
     CDS             complement(4301..5917)
                     /locus_tag="CPT85_09405"
                     /inference="COORDINATES: protein motif:HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20640.1"
                     /translation="MLNNLILIVLFVCFVSGLIYVYLRLKEETGKTKKKGGEELQISP
                     EDIYXIINADFATAQKLAKKYLAQNPYHHDLRKLLVKSYIETQKEYEAISNLLVLVQF
                     YPDDLSLYLQLATLYKNTHQNKKAIHFYSYVLSKDKYDLNSMRNLAELYYNNKQKESA
                     LKLYKQLVTYIDDEQEKMDYYEIMGNIYTTYGEYVKAANLYKKVLEAQPSNADVIKEL
                     RKIYLKQKDTENVIYLSRKLINIEPDNYAYYEEIINLLFHVHAYQDALDYAQKALELP
                     TADVFAVKNQIAKIYIYTGKIKESIQLINETIVQDPTNLLLSQTLAMAHCMNKDFEMA
                     KKVCDDALEVAVPSDIKVIHNNLSTILAEEAVYLLNQGKTKQAFDKFSEAMQYNNENP
                     EIFFKLATANRSIKNYSEAIRQCKRAIELAPEISLYYETLADIYYEIQNFIEAKKLYK
                     EAVFIDPKNSRAHAFLGILQSKDKEHENAIKSLETAVSIDPDNVDIRYNLALAYEVAG
                     KKDEAKNEYEKVLELEPSHKEANNNIKLLS"
     assembly_gap    5771..5772
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(5934..6266)
                     /locus_tag="CPT85_09410"
     CDS             complement(5934..6266)
                     /locus_tag="CPT85_09410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001255447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="DAB20641.1"
                     /translation="MENCIFCKISNKEIPSKLLYEDEFTVAFNDLNPQAPNHILVIPK
                     KHFASLNELDDEKYMSALLNAVKEVTKKLGIKEYRTVINTGETAGQTVFHIHIHILAG
                     RPLLWPPG"
     gene            6447..6520
                     /locus_tag="CPT85_09415"
     tRNA            6447..6520
                     /locus_tag="CPT85_09415"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:6481..6483,aa:Arg,seq:ccg)
     gene            complement(6531..7532)
                     /locus_tag="CPT85_09420"
     CDS             complement(6531..7532)
                     /locus_tag="CPT85_09420"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937"
                     /note="sigma factors are initiation factors that promote
                     the attachment of RNA polymerase to specific initiation
                     sites and are then released; primary sigma factor of
                     bacterium; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="DAB20642.1"
                     /translation="MANKTEKFTNEDVDMAENGEVSIDKITEEPEDEDLIMSVEEPKT
                     AENVSSVNADDSVKIYLQQIGKIPLLTAEQELEVAKKIKEHNDEHSKEILVNANLRLV
                     VSIAKKYIGRGLSFLDLIQEGNMGLMKAAEKFDYAKGYKFSTYATWWIQQSITRAIAD
                     KSRIIRLPVHMIETLSKIKKVTMDLTTETGKVPSKEEIAYRVGIPVNKLTSLIKAAQS
                     TISIETPATAKDESSKLGDFIVDESTISPDTRVSQENLFEDIQKMLNQLSPKERDVLI
                     MRFGLNDDGNRKTLEEIGSRYGVSRERIRQIENRAISKLKKLCKNNNLSKGLKNYFN"
     gene            complement(7567..8217)
                     /locus_tag="CPT85_09425"
     CDS             complement(7567..8217)
                     /locus_tag="CPT85_09425"
                     /inference="COORDINATES: protein motif:HMM:TIGR00186"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="DAB20643.1"
                     /translation="MQKYGXXIINLAKANGVVFQFVPKERFANFANIAHQGVVAFVSP
                     VEYTDFYDFLETKKDGYSKIVILDGVEDPHNVGAIIRTAACAGYDAVIIPSRRNAQVN
                     ATVEKTSAGAINHIPVIQANSLSSVIDKLKDNDYWIIAADAHGKDNYFDIDYTDMNFA
                     LIMGGEETGVSKNNMKKSDFVVKIPMLRNFNSLNVSNAACAIIYESVRQSVSKNKT"
     assembly_gap    8198..8200
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8439..9983
                     /locus_tag="CPT85_09430"
     CDS             8439..9983
                     /locus_tag="CPT85_09430"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20644.1"
                     /translation="MENFLAKLKPDTKVNIGVSVSPNVGVEMIMVDPATHKIMKYARR
                     DLSYNSSTREIEDYGEFKQALSDLFNEIKIAPQNANVVVNMPSVCFGHSFLPTVLDDE
                     GVTTALTSEIEQNYLFKKNVPVVSWVEVKENNSTEKRYILYSAMQEGVVDVIKQIFTD
                     LGATLIAIENTYSSLMKTLEYTEITKDFAASSGSWNILLVSQNSYAVFSLLGYSVIEY
                     FEEPLAIRSFNNDEVYVAISQAASAVLEKYPTDKLLIISESNDVSAEILAMQLKQPGD
                     VIFLECNQYAKSQIMDVDLNVLPHYIKAITPEAIGAAIYRFKDYRLKLNFLVTADYQA
                     PDTIRVMGFDLTKEQLTIYSLIIGGLFILVGFLCSTIVGNYASQLEEKSSSLSNETTT
                     LQKELTDLQSKGNKIDIYSAAKEIDQSMVDKILYYNSIGADIPAKVWLTVFYGDSNGA
                     YGIKGETTSVDEVYLFFRNLKAQVPKSDLFLSKLSVDDQEGLIDIEKNPNASYTFELT
                     NNKXVL"
     assembly_gap    9973..9974
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            10160..>10591
                     /locus_tag="CPT85_09435"
     CDS             10160..>10591
                     /locus_tag="CPT85_09435"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20645.1"
                     /translation="MNENQKLIYIVLIVLCAAVGIYFIVPKADAAIKAYQEVQTKTIE
                     LDKIKKDIEDLKNKKAAYEKEEKISTKPVYKSEIATLDMMSSFGVMFEDVIQSAKYNG
                     LKLRSIEYNMNPAYDVVQKNIGSEYNVCAVQMQLIGNYMQFR"
BASE COUNT         3327 a         1904 c         1889 g         3460 t
ORIGIN      
        1 aaaaagcctt gtcaaaattt atagagtctt tttcaacaat cggagctatt gcatcaaaaa
       61 agtgcaaatg ttcactaccc gtaaaacttt ttatatcctc ggccagatcc gccgaagtta
      121 aaggaccgga tgccagtatt acagggcctt cttgagggat agtttttacc tcttctctnn
      181 ctctgattat atttatatta tgctcctgca agagttgttc tactttttgg gagaacaatt
      241 ctctgtcgat tgccagtgca ttgccggcag gaactttgac ttcatgtgca acttgtataa
      301 ggaaagagcc taaaattgac atttcctgtt ttaaaagtcc gcttgcattt gtagggtcga
      361 tagagccaag actgttactg cacacaaatt ctgccggatt ttgtgtggaa tgcgctccgg
      421 ttgttttatt aggtcgcatt tcataaagat caacagcaac accattttgg gctagctgaa
      481 gagctgcctc acagcctgcc aaaccggcgc ctataacttt tactctgtaa tccattactg
      541 tatcatctca tcataagatt caaggtcgtt gtaattaaac atattcacaa actggtacaa
      601 caattcaggg aagaattttt ttgtaccgac ttcgagcatt atacgaagag cctctttggt
      661 atttttaacc ttatgaacag ttctgttaga ggtaaggtca tcaaaaaagc tgcataaacc
      721 tacaacgcgt gtgagtttgc ttatttgttc tcctgaaagt ttgaaaggat aaccagagcc
      781 gtcattattt tcatggtgtt ccaatgcaac taggcaaata tcttctggca gtcccatttc
      841 atatttcaaa attttgtagc ccatttgtgt atgtttttga aaaagtttgt tatcctgctg
      901 ggacaaactg gttttttcaa gtatttcttt tggaagtctt gtcattccaa tatcatggag
      961 caaagatgcc tgtgccaatt tttctatgac atcttcatca tactcgagct tgtaacccat
     1021 tgcagtagcc agaatagctg tatttaatgc gtggcagtca ttgtagttac cgagcaattt
     1081 gagttgagag cagaatttaa cttcctgaat aacagactga acgtcatcaa gtattttatc
     1141 cttgatttcg tcaaccattt ggattgcatc tttatttgca ttttctctca gcgcaaacat
     1201 tgttgttgcg tagtatgact tcatatctac ctgtgattgc gctttaaact ttgattttct
     1261 gttaacagtt ttgtcaaaga caatttcttt tggttttgca ggctcaaaag attcttcttc
     1321 cataggcgca acaggagccg caggtgccat atgtgttgtg gggcggcttt ctgtatgttt
     1381 tggtgtagat ttaaacaaaa catcatactg acttatttga agcagcttac cggaagtaag
     1441 aatttcacca gcatctacaa gtttttcccc gttttcgtta tataaatcaa aggggagcat
     1501 tttatatttt actaattctt ctacaggaat tttttccatg ggaacccaac tataatcgta
     1561 ccgtacaata ataattatag gctacnncgg atttgcaaac aatacgttta tatgatttta
     1621 aattattgat ataataagaa atataacgta acaagcagga gctgaatatg aattctacta
     1681 aaattaaata cattggccac agtgcttttt attttgaaac aggcagccac gggatactcg
     1741 tggacccttt tatttcaaac aatcctgttg caaaattcaa ttataaagaa gaaatcataa
     1801 ccgatatatt tttgactcac gcacatgcag atcacatggg tgatgcaata cctatttcac
     1861 gtgcgacaaa agcccctatc accgctatat ttgaactagc aaactactgc atggccaaag
     1921 gtgctcttgt tgaaggtgtt aattttggag gcaaattatc atacccctgg ggatttgcaa
     1981 ggtttctgcc tgcattccac agcagctcca ctcctgacgg gcagtatgcg ggaatgcctg
     2041 cttccataat gtttgaaata aacggtacta aaatttatca cgcaggtgat acgtgcctta
     2101 actcagagat gaaaacagcc ggcgaggttt acaaacctga tattgcattt ttaccggtag
     2161 gttcatttta tacaatggac aaaaatgaag cagcactggc tgcaaaatgg ctgggcgtaa
     2221 aaaaagtaat tccaatgcat tataacactt ttgatgcaat caaaaccgac attcaagaat
     2281 tcaaaaatat gattgaaaaa gaaggcatag aatgtattat tcttaaaccg ggagaaagtc
     2341 tggagctgta atgcaaaaaa acattgcaaa acaaaaaatc agccttatga ttgtgcccac
     2401 gggcacaggt gcctcaattg gaggctatgc cggtgatgca agcgtctatg ctcaaaaaat
     2461 agcccggcac ataccattga ttgtaaatcc taatattgtc aacgctgcgg ttttttcggg
     2521 cattactgcc aatatgtatt atgtagaagg ttattttatt gaacagtttg taaaagggga
     2581 aattggcctt ttgccctcaa aaaacaacaa gattggcgta atttttgaca gagcaataag
     2641 caaaaatgtt ttgaacatac acatcaacac aatcaatgca atgaaaaccg tttatggtat
     2701 agatattaca ggttatgaaa taacggatga aacagcagat gtggagtttt ttacaaccga
     2761 tagcggaatt tcttccggat gtgtaaaaaa tcctacaacc ctaaaaaaag caggccaaaa
     2821 gcttatcaaa aaaggagcac aaacaatagc cgttgtctgc aagtttgctg agccgccgca
     2881 agatgagtac gaaaaaggga acggagtgga tattgtaggc ggagtagagg caattatttc
     2941 tcactatcta tcaaaagagc tgatgtgccc ttgtgtacac gctcctgcat ttgaggatgt
     3001 gacaatagac ggcaatattg ttgacgaaaa agtcagtgct gagtatatta caccaacatt
     3061 tttgccctgt ttgttaacag gattaagaaa tgcccctttg atagtaaaaa aagaaaatat
     3121 tacacctgaa tgcattacat acaaaaattt gcattctgtt tgtgtgcctt ataatgcact
     3181 tggttcttct gtagtgcttg attgcataga aaaagacatt cctgtttatg caattcttga
     3241 gaacaagaca gtactcaata ttgacaaaac ctcaattaat aaaacgattg ccatcaaaga
     3301 aatcgcgact tatgatgatt atataaatat tattaaggag atagaatatg aaaaatctta
     3361 aagcgttttc catacctgag cttttgattg ttatcggtat tacaggtgta atttgcgcta
     3421 tgatgcttac tgttgtaaag ccaacagaca aatacctccc ttatgcatat tacaatgcat
     3481 attacacact tgctacagca gcttataata ttaaagaaga tgccagagac ctgcaaaata
     3541 cagaaggagc agaagatgta gacaaggcgt tccccggaga tatggaaaac gtagacagca
     3601 caactgcggc aaaagaatta tgcagaaaac tggcaacgaa ccctaatccc gcaaatgaag
     3661 aagaaaataa attgggctat ctcaacacaa cagtctacaa ttgcggtgcc aattttaaaa
     3721 cagtgcctat aaaaggttct gactcggact ttaaaaaaga aaacatggcg tttcgttctt
     3781 caaactctat gagatatttt atctcgccaa tgcaaaaagt aacggtaaaa gatcctttaa
     3841 acggcaacgc agatgtggaa ttaaaatact ttcttgtatg ggtagatttg aatgcagaaa
     3901 gaggaccaaa tactgcaact tggaattcca acaagaaaaa agccattgat attgttccgt
     3961 ttattatatt aatggatggt actgtattgc ctacaggatt tccgactaca gacagcagat
     4021 atttgactgc tcacgtacag tattctgcat ctaatacaga acagttttca caatcaccaa
     4081 gaccatacta tgactctgtc atagctgctt ttaacaaaaa tgaatatcct gttcacgatg
     4141 tttattcatt attctcttca ttccaaaaag cattaaaagg tactgcagca gaaatcaaaa
     4201 gctacacacc gtctgtcacc ggatttgatg aaaaatgtac tttagaaagc gtcaacgatg
     4261 ctcctatttg tacaatcgta atagacgaaa agaaaaaatt ctaagataaa agttttatat
     4321 tattattagc ttctttatga gaaggttcga gttcaagaac cttctcatat tcatttttag
     4381 cttcatcttt tttgcctgca acttcgtatg caagtgcaag attatatctg atatcaacat
     4441 tgtccggatc aatcgataca gctgtttcca atgattttat tgcattttcg tgttctttat
     4501 ctttggattg caaaatgccc agaaatgcgt gtgctcttga gtttttaggg tcaataaaca
     4561 ctgcttcttt atatagtttt tttgcttcaa taaagttttg tatttcgtaa taaatatctg
     4621 ccagagtttc gtaataaaga cttatttcag gagcaagctc aattgctctt ttgcattgtc
     4681 ttatagcttc agaatagttt ttgatactgc ggtttgcagt tgcgagttta aaaaatattt
     4741 cagggttttc attgttgtat tgcattgcct ctgaaaactt gtcaaaagcc tgttttgttt
     4801 tgccctgatt taaaagataa acagcctctt ctgcaagaat agtggacaaa ttgttgtgga
     4861 tgactttaat atcagacgga acagccacct ctaacgcatc gtcacaaact ttttttgcca
     4921 tttcaaagtc tttgttcata caatgcgcca ttgcaagggt ctggctcaaa agcaaattgg
     4981 tagggtcttg cacaattgtt tcgttaataa gctgaatact ctctttgatt ttacctgtat
     5041 aaatataaat ctttgctatc tgatttttta cagcaaaaac atctgctgtt ggcaattcca
     5101 gagctttttg cgcatagtcc aaagcgtctt gatatgcatg tacatgaaat aaaagattaa
     5161 tgatttcctc gtagtatgca taattatcag gctcaatatt gattaacttt cttgaaagat
     5221 aaataacatt ttcagtatct ttttgtttta gatatatttt tcttaactct tttataacat
     5281 ccgcattgga gggctgggct tcaagcactt ttttataaag gttggctgct ttaacatatt
     5341 ctccatatgt tgtataaata ttacccatta tttcgtaata atccattttt tcctgctcat
     5401 catctatata agtaacaagc tgtttatata gttttagtgc agattctttt tgtttgttgt
     5461 tgtagtacaa ctccgcaaga tttctcattg agttgaggtc atacttatct ttgctcaaca
     5521 cataactgta aaaatggatt gcttttttat tttgatgagt atttttatac agtgttgcaa
     5581 gctgaagata caagctcaaa tcatcaggat aaaactgaac aagaaccaga agatttgata
     5641 ttgcttcata ttctttttgc gtttctatat aagactttac gagaagtttt cttaaatcgt
     5701 gatgatacgg gttctgcgcc agatattttt ttgcaagctt ttgtgcggta gcaaaatccg
     5761 catttataat nntatagata tcttcgggcg aaatttgtaa ctcctcgccg ccttttttct
     5821 tagttttgcc tgtttcctct tttagcctca aatatacata tatcaggcct gagacaaaac
     5881 aaacaaataa tactatcaaa attaaattat taagcattta atattcctat ttactaaccg
     5941 ggaggccaca ataaaggtct gcctgcaaga atatgaatat gtatatgaaa cacagtctga
     6001 ccggcagttt ctccggtatt tattactgtt ctgtattctt ttatgcctaa tttttttgtg
     6061 acttctttta cagcatttaa caaggcagac atgtattttt catcatcaag ctcatttaaa
     6121 gatgcaaaat gtttttttgg tataacaaga atatggtttg gtgcctgtgg attcaggtca
     6181 ttgaatgcaa cggtgaattc atcttcgtat aaaagttttg aaggaatttc tttgttagat
     6241 attttacaaa aaatacaatt ttccatatac cgtctatcct tttttaaatt atattataat
     6301 gcattatgct ataatttaaa agtataccaa cgttgtatat atgtgtcagt agctcaccgt
     6361 tgaatcttta acgaagttaa agttcaacta attatagatt ttttgtcctg ctgagcgtac
     6421 aataggttag tgagaatatt aatagtgtgt cagtagctca gcaggataga gcagcagtct
     6481 ccgaagctgc aggccggggg ttcgaatccc ccctggcacg attattttaa ttaattaaaa
     6541 taatttttta aacctttgct gagattgttg tttttgcaca attttttgag tttacttatt
     6601 gcacggtttt caatctgtct aatacgctct cttgatacac cgtaacgcga gccgatttcc
     6661 tcaagagttt tgcgattacc gtcatcgttt aaaccaaaac gcataataag tacgtcccgc
     6721 tcttttgggc tcagctggtt gagcattttt tgtatatctt caaaaagatt ttcctgagaa
     6781 actctcgtat caggagatat tgtggattca tcaacaataa aatcacctaa tttagatgat
     6841 tcatcctttg cagtagcagg agtttctata cttatagttg attgcgcagc tttgataagg
     6901 cttgtgagct tgtttacagg aattcccaca cgataagcaa tttcttcttt tgaaggaacc
     6961 ttgcctgttt ctgttgtcaa atccattgta acttttttga ttttgctcaa tgtttctatc
     7021 atatgaacag gaagacgtat tattctggac ttgtcagcga ttgcacgggt gatagattgc
     7081 tgtatccacc atgttgcata tgtagaaaat ttatagcctt ttgcataatc aaatttttca
     7141 gcagctttca taaggcccat attgccttct tgaataagat caagaaacga aagaccacgg
     7201 cctatatatt tttttgcaat actgacaacc agacgcaagt ttgcattaac aagaatctct
     7261 tttgagtgtt cgtcattgtg ctcttttatt ttttttgcaa cctctagttc ctgttcagct
     7321 gtcaaaagag gtattttccc tatttgctgc aggtaaattt tgaccgaatc atcagcattg
     7381 acactggaga cgttttctgc ggttttcggc tcttccaccg acataatcaa gtcttcgtct
     7441 tcaggttctt ctgttatttt atctatagaa acttccccgt tttctgccat atcaacatct
     7501 tcattggtaa atttctctgt tttgttagcc atttatgctc ctgtaattag taataaatat
     7561 tatacactat gttttatttt ttgatacaga ctgtctgacc gattcgtaaa taattgcaca
     7621 ggcagcatta gaaacattaa gcgagttaaa atttcttaac attggaattt taacaacaaa
     7681 atctgatttt ttcatattgt ttttagacac tcctgtctct tctcctccca taatgagtgc
     7741 aaaattcatg tctgtataat caatgtcaaa gtaattatct tttccatgtg cgtcagctgc
     7801 aattatccaa tagtcgttat cttttagctt atcaataaca ctcgaaagac tattagcctg
     7861 aatcacaggt atgtggttaa tagctccggc cgatgttttt tccacagtag cattgacctg
     7921 tgcattgcgg cgggaaggta taataactgc atcataaccc gcacaagctg ctgtacgtat
     7981 gattgcgcca acgttatgcg gatcttccac tccgtctaat ataactattt ttgaatatcc
     8041 atctttttta gtttccaaaa aatcataaaa atcagtatac tccaccggag aaacgaatgc
     8101 gacaacaccc tggtgcgcaa tgttggcaaa gtttgcaaac ctttctttag gcacaaactg
     8161 aaatacaaca ccgtttgctt ttgcaagatt tattattnnn ttgccgtatt tttggatatt
     8221 aaaattttgt ttatacgatt agcgcaagta ctcaaagcct ctgttagagc atttcttccg
     8281 tatatgtaat ctgacggttt ttttgtgttt ttattttcca tttaatctca cctttttggg
     8341 gtatgtaaat attcttgcca taataattat actataatat aattgtatag gttttaaatt
     8401 acagtgttat aaacttggaa ttatattgga attagttgat ggaaaatttt ttagcaaaat
     8461 taaagccaga cacaaaggtt aatatagggg tttcggtctc tcctaacgtc ggcgtagaaa
     8521 tgattatggt agaccctgca acgcataaaa ttatgaaata tgcacgcaga gatttgagtt
     8581 acaactcttc aacaagagaa attgaagatt acggcgaatt taaacaggca ttgagtgacc
     8641 tgtttaacga aattaagatt gcaccgcaaa atgcaaatgt ggttgttaat atgccaagcg
     8701 tatgttttgg ccactcattt ttgcctacag ttcttgacga tgaaggcgtt actacagcgc
     8761 tgacttcaga aattgaacag aactatttgt ttaagaaaaa tgtacctgtt gtaagctggg
     8821 ttgaagtaaa agaaaacaac tcaacagaaa aaagatacat tctttactct gcaatgcaag
     8881 aaggtgttgt agatgtaata aaacaaatct ttactgattt gggcgcaact cttattgcaa
     8941 ttgaaaacac atattcttca ttaatgaaga ctcttgagta tactgaaatt acaaaagatt
     9001 ttgcagcttc ttccggctct tggaacatac ttttggtttc acaaaacagc tacgcagtat
     9061 tttcattgct gggatacagc gtaattgaat attttgaaga gccattggcg atacgttcat
     9121 ttaacaatga tgaagtttac gttgctattt ctcaggcagc ttctgctgta cttgaaaaat
     9181 atcctacaga caagctgctt attatcagtg aatctaatga tgtaagcgca gaaatccttg
     9241 caatgcagct gaaacagcca ggagatgtca tttttctaga gtgcaaccag tatgcaaaat
     9301 ctcaaattat ggacgttgat ttaaacgttc tgcctcacta cattaaggct attacaccgg
     9361 aagcaatcgg tgctgctata tatagattta aagattacag attaaaactc aacttccttg
     9421 tgacagctga ttaccaagct cctgacacaa tcagggtaat gggttttgat cttacaaaag
     9481 aacagctgac aatatacagt cttataatag gcggtttatt tattttagta ggcttcttat
     9541 gttctacaat tgtcggcaat tatgcgtcac agcttgaaga aaaaagctct tctttatcaa
     9601 atgagacaac cactttgcaa aaagagctga ctgaccttca aagcaaaggc aacaaaatcg
     9661 atatttattc tgcagccaaa gaaattgacc agagtatggt tgataaaatt ctttattaca
     9721 actcaattgg tgcagatatt ccagcaaaag tttggttaac ggtattttac ggcgactcaa
     9781 acggagctta tggtataaaa ggtgaaacaa catctgttga tgaggtatat ttattcttta
     9841 gaaacctcaa agcacaggtg ccaaaatcag acttattcct ctcaaaactc agtgttgatg
     9901 atcaggaagg cttgattgat attgaaaaaa atccgaatgc ttcttataca tttgagctga
     9961 ctaataataa atnngttctg taaaaatcaa agacccgaac acagaggaag actcttccgc
    10021 aaaagataaa aaaggtaaga aacaaccttc ctcaacatct aatcccggaa aagtaggttc
    10081 aggagatttg cctgatatcc ctgatttacc gggagcataa aataaaattt aaacctatac
    10141 acgaaagggc attgtaaaag tgaacgagaa tcaaaaactt atatatattg tattaatagt
    10201 tctttgtgca gcagtcggaa tttattttat tgttcccaaa gctgatgcag caatcaaagc
    10261 gtatcaagaa gtacaaacaa aaactattga gcttgataaa atcaaaaagg atattgaaga
    10321 cttaaaaaat aaaaaagctg cttatgaaaa agaagaaaaa atttcaacaa aacctgttta
    10381 taaaagcgaa atagctactt tagatatgat gtcatctttc ggtgttatgt ttgaagatgt
    10441 tatccaatct gcaaaatata acggattaaa attacgctca atcgaataca atatgaatcc
    10501 tgcatacgac gttgtacaaa agaatattgg cagtgaatac aatgtttgtg cagtgcaaat
    10561 gcaattaatc ggaaattata tgcaattccg t
//
LOCUS       DABS01000206            4789 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_2047, whole genome shotgun sequence.
ACCESSION   DABS01000206 DABS01000000
VERSION     DABS01000206.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4789)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4789)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4789
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..340)
                     /locus_tag="CPT85_09440"
     CDS             complement(<1..340)
                     /locus_tag="CPT85_09440"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20625.1"
                     /translation="MINTLHNISFKGIVVANGTAKELRSINELYEKEYFADDCFSNGS
                     FEXFRDYQNYSLTGIYDDGQKYAENLYITNEDTPRLKEYLRQKQSKGKRLTGNESTQQ
                     IIETLKNNLKL"
     assembly_gap    201..202
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            511..1608
                     /locus_tag="CPT85_09445"
     CDS             511..1608
                     /locus_tag="CPT85_09445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012307340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="DAB20626.1"
                     /translation="MLRAGIVGLPNVGKSTLFNALTSTANAQSANYPFCTIEPNVGVV
                     TVPDERLYVLQKMVKTDKVVPTAIEFVDIAGLVKGASKGEGLGNQFLANIRETDAIIE
                     VVRCFDDPNTIHVTGKVDPIDDIETINTELALADMASLEKRQQRLSKVAKTGDKDAVA
                     ELAIVEKLLKLLEDGKFINVKDHFTEDELPYIKLMHLMTTKPVIYAANVSETDLATGN
                     DYVERVKEYAKTHNADVVVISAKIEAELSELGDEEKKDYLAELGVESSGIERMIRAVY
                     HLLDLRTYITAGEIEVRAWTIPAGAKAPQAAGVIHTDFEKGFIRAEVTGYEDFIKCGS
                     YAAAKEKGLTRLEGKDYVVQDGDIVHFRFAV"
     gene            1611..2282
                     /locus_tag="CPT85_09450"
     CDS             1611..2282
                     /locus_tag="CPT85_09450"
                     /inference="COORDINATES: protein motif:HMM:PF13529.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20627.1"
                     /translation="MIKKLFAILFCITLSCFVFGFSDIKQQDEYTCAPVCAANCIIDI
                     LNQKIEPNSLVQELCKNAKTDNQGTTAQNLITAIEKYLAKKHLQTQIKYYGIRRTAKQ
                     YQAKKPLNICEELQNGRFIILNIGFYEHSNGVLKRKDGHYVNACSCKNNRILITDPYA
                     KDKSPFYIELHKPSNLNIKNTKDNEKYNNKNYEYYEIKPDFDYQTANETALLNGIISI
                     YPLYL"
     gene            complement(2293..4476)
                     /locus_tag="CPT85_09455"
     CDS             complement(2293..4476)
                     /locus_tag="CPT85_09455"
                     /inference="COORDINATES: protein motif:HMM:PF02446.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20628.1"
                     /translation="MRILNYTMNSRVAGVYANAQQPSFKRAPKEEIIMPDGRNEQQFF
                     TDTIQQAKSFLGIKNLGLILHQSCFPVKDKDVFIGSHINSKALEVNKFLHMHGFDSIQ
                     LGPPGMTKLSPYTSSIDSKNYLYTDFEKFVTDEYANILTVNDNNDDIKNAIRQVDKEG
                     VYEASSDQTNFNKAFYVVDKLYEKAYKNLMLKVENKDPSALKLYNEFNQFKIEQNDWL
                     EKNAVFVQLKNLLGMDDNFFEWPDMCRNFFDYMEDKDSPFHDEAIEYYDKLNKRYGQD
                     IDLYKFKQFIIDKQEREFKSENGKLPYSTDAIIGFHMMDYFAHKDAFLPGYRVGTPYG
                     GEGKAIGNGSIWGNNQVWDIPVLDPKKLFIKDEQGNIIGLGSAGKLIRQKFEKLLDTY
                     SNVRIDHAIGLIDPWIYNKSRIEVNVGRHNDEDPNVPEHVIYRNAHGANISMMHKENV
                     YGYDKGWDWHVTDMINQDIKNMPDIDPDGDYAKILDEILLPLFEEKGVNPQDMPWETL
                     GCDTPKFREIFDKNRNGKVLPEITSSYEWQIQKRMADPRHKNDTVMLGCHDHPPFAQV
                     CDDNFFAQKNCQNGIYEAPYIVGSLYPEKTNEQRADIMNQLSWDRRLRVKLKFAEMFR
                     FAQKIQLSFMDFFGLDKTYNYAGTQNPNNWKLRLNKDYQKDFYEKLAWQPGDKGVNNV
                     AVNMPELLERAVKSKIIMDGGKFEDQQQLLDDLEYCDKSILKVKE"
     gene            4657..4743
                     /locus_tag="CPT85_09460"
     tRNA            4657..4743
                     /locus_tag="CPT85_09460"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:4691..4693,aa:Leu,seq:caa)
BASE COUNT         1526 a          881 c          828 g         1552 t
ORIGIN      
        1 ttaattttaa attattcttt aatgtttcaa taatttgctg agtagactca ttacccgtaa
       61 gcctctttcc ttttgattgt ttttgtctaa gatattcttt tagccttggt gtatcttcgt
      121 ttgttatata caaattttct gcatatttct gcccatcatc ataaattcct gtaagtgaat
      181 aattttgata gtcccgaaaa nnctcaaaag agccgtttga aaaacaatca tcagcgaagt
      241 attctttttc atatagttca ttaatagatc tgagttcctt cgctgttccg ttggcaacta
      301 caattccttt aaaactaata ttgtgtaaag tatttatcat ttaattacag tccgggataa
      361 aataagtcaa tatagaaaaa atccaaaaaa atattatttg ttattcatca gtataaaatt
      421 tacattcagc aatataaatg acatcattgt aaaacctatg tgtttttcgt aggataaaat
      481 taagaattac ataaaaagag ggacataaaa ttgttaagag cagggattgt agggctaccg
      541 aacgtaggaa aatcaacttt atttaacgca ttgacttcaa cagcaaatgc gcagagcgca
      601 aactatccgt tttgcactat agaacctaac gtaggcgttg ttacagtgcc tgatgaaaga
      661 ttatatgttc ttcaaaaaat ggtaaaaaca gacaaagttg tgccgacagc tattgagttt
      721 gttgatattg ccggccttgt taaaggagca agcaaaggcg aaggattggg caaccagttt
      781 ttggcaaata tcagggaaac agacgcaatc attgaagttg tgagatgttt tgatgacccc
      841 aacacaatcc acgtaacagg caaagttgac ccaattgatg atatagaaac aatcaacaca
      901 gagctcgcgt tagctgatat ggcaagcctt gaaaaacgtc agcaaagact ttctaaagta
      961 gcaaaaacag gagataaaga tgccgttgcc gagcttgcaa ttgtagaaaa actcttgaaa
     1021 ctcctcgaag acggtaagtt tattaatgta aaagaccatt ttacagagga tgaattacct
     1081 tatatcaagc ttatgcatct tatgacaaca aaacctgtaa tttatgccgc caacgtatct
     1141 gaaacagacc ttgcaacagg caatgattat gttgaacgag taaaagaata cgcaaaaaca
     1201 cacaatgctg atgttgttgt gatttcagcc aaaatcgaag cagagctttc agagctcggt
     1261 gatgaagaga aaaaagacta tttagctgaa ctcggcgttg aaagctccgg cattgaaaga
     1321 atgattagag ctgtatatca tttgcttgac cttagaacat acattaccgc aggagaaatt
     1381 gaagtgcgcg cctggactat cccggctgga gccaaggcac cgcaggcagc tggtgtaatc
     1441 cataccgatt ttgaaaaagg gtttatccgt gcagaagtaa caggatatga agatttcata
     1501 aaatgcggct cttacgcagc ggcaaaagaa aaaggattaa cccgtcttga aggcaaagac
     1561 tatgttgtcc aagatggaga tattgttcac tttagatttg cagtataaaa atgattaaaa
     1621 aactttttgc gatattattt tgcataacat tatcatgttt cgtttttggt ttttctgaca
     1681 ttaagcagca agacgaatat acctgtgcac ctgtatgtgc agccaattgt ataatagaca
     1741 tacttaatca aaaaattgaa ccgaattctc ttgtacaaga gctgtgcaaa aatgccaaaa
     1801 ctgacaatca aggcacaaca gctcaaaatt taattactgc aatagaaaaa tatttggcga
     1861 aaaagcatct tcaaacacaa ataaaatact atggaataag acgcactgcc aaacaatatc
     1921 aagcaaaaaa gcccctaaat atttgtgaag aattacaaaa cggacgattt ataattttga
     1981 acatagggtt ttatgaacac agcaacggcg tattaaaaag aaaagacgga cattatgtaa
     2041 acgcctgttc ttgcaaaaat aacagaatac tcattactga cccttacgca aaagacaaat
     2101 caccatttta tattgagctt cataaaccat ccaatttaaa tataaaaaac acaaaggata
     2161 acgaaaagta taataataag aattatgaat attatgaaat aaagccggac tttgattacc
     2221 agacggcaaa tgaaacagca ctgcttaacg ggataatcag catttacccg ttatatttat
     2281 agaaaataat atctattctt ttacttttag gatacttttg tcgcagtatt ccaaatcgtc
     2341 caagagctgt tgttggtctt caaatttacc accatccata ataatctttg atttaacagc
     2401 tctttcaagc agttcaggca tattcacagc tacattgttg acacctttgt ctcctggttg
     2461 ccaggccagt ttttcataaa aatctttttg gtagtctttg tttaaccgta atttccagtt
     2521 gtttggattt tgggtacctg cgtagttata agttttatcc aatccgaaaa agtccataaa
     2581 ggaaagttgg attttttgtg caaatctaaa catttctgca aattttagtt taaccctgag
     2641 tcttctgtcc cagctaagct ggttcatgat atctgcgcgt tgttcgtttg ttttttccgg
     2701 atataaactg cctacaatat agggcgcctc ataaataccg ttttggcagt ttttttgagc
     2761 aaagaaattg tcatcgcaaa cctgagcaaa cggagggtgg tcatggcagc ccagcattac
     2821 ggtatcattt ttatgccttg gatcagccat tcttttttgt atttgccatt cataagaaga
     2881 tgttatttcc ggcaaaactt tgccgtttct gttcttatca aaaatttctc taaattttgg
     2941 tgtatcacag ccaagtgttt cccatggcat gtcttgagga tttacacctt tttcttcaaa
     3001 caaaggcaga agaatttcat caagaatttt ggcataatcg ccgtcagggt cgatatcagg
     3061 catattttta atatcctggt taatcatatc agtaacatgc caatcccagc ccttatcata
     3121 gccgtataca ttctctttgt gcatcatgct gatatttgca ccgtgagcat ttctgtagat
     3181 gacgtgttca ggcacattgg ggtcttcgtc attatgtctt ccaacattaa cttctatcct
     3241 gcttttgtta tatatccacg ggtctataag acctattgca tggtcaatgc ggacatttga
     3301 gtatgtatca agaagttttt caaatttttg ccttatcagt ttccccgcag aaccaaggcc
     3361 aataatatta ccctgttcat cttttataaa caatttttta ggatccaaaa caggtatatc
     3421 ccacacctga ttgttccccc atatagagcc gttacctata gctttaccct cacctccata
     3481 tggagtgcct actctataac caggcaaaaa agcatcctta tgtgcaaagt aatccatcat
     3541 atgaaaaccg attattgcat ctgtactata aggaagtttt ccgttttctg acttaaattc
     3601 tcgttcctgt ttgtctataa taaactgttt aaacttgtat aaatcaatat cctgcccgta
     3661 tcttttattc aacttgtcgt agtattcaat tgcttcatca tgaaatgggg agtctttatc
     3721 ttccatatag tcaaagaaat tgcggcacat atccggccat tcaaagaaat tgtcatccat
     3781 gcccagaaga tttttcaatt gcacaaacac ggcatttttt tccagccaat cattttgttc
     3841 aattttaaat tgattaaact cattatagag ttttaatgca gaagggtctt tgttctctac
     3901 ttttaacatc agattcttat aggctttttc ataaagctta tccacaacat aaaaggcctt
     3961 attaaaattt gtctggtctg aagaggcttc ataaacgcct tctttatcga cctgcctgat
     4021 tgcattttta atgtcatcat tgttgtcatt aacagttaag atattcgcat attcatctgt
     4081 tacaaatttt tcaaaatctg tataaaggta attttttgaa tctatagatg aggtatacgg
     4141 tgaaagcttt gtcatgccgg gaggtcccag ttggattgag tcaaatccgt gcatatgtaa
     4201 aaacttattt acttcaaggg cttttgaatt tatatgtgag cctatgaata cgtctttatc
     4261 cttaacgggg aagcaggatt gatgcaaaat aagccccaga tttttaatgc cgagaaatga
     4321 ttttgcctgt tgaattgtat ctgtaaaaaa ctgctgctca tttctgccgt caggcatgat
     4381 aatttcttct tttggtgcac gtttaaaaga cggttgttgt gcatttgcat acacccctgc
     4441 aactctgcta ttcattgtat agtttaatat tctcatatac ccactttatc cagactatat
     4501 ctaattaata gccctacaat tactttttga acagtttttt acataaaatt tacataactt
     4561 aaggctaaat ttaaaaaata gtactggaat ttttaaattg ttttggtaga ataattttac
     4621 agtgttaatg aattttaatc attacacatg ttatcagccg ttgtgatgaa attggtagac
     4681 gtgctagact caaaatcttg tgtgggcaac cacgtgccgg ttcgactccg gccaacggca
     4741 ccattttttt aagactccct tgggagtctt ttttgtttgt tgaattaac
//
LOCUS       DABS01000207           11339 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_11479, whole genome shotgun sequence.
ACCESSION   DABS01000207 DABS01000000
VERSION     DABS01000207.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 11339)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 11339)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11339
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(1..794)
                     /locus_tag="CPT85_09465"
                     /pseudo
     CDS             complement(1..794)
                     /locus_tag="CPT85_09465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005819789.1"
                     /note="frameshifted; incomplete; missing stop; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-diketo-D-gluconic acid reductase"
     assembly_gap    332..333
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(813..1814)
                     /locus_tag="CPT85_09470"
     CDS             complement(813..1814)
                     /locus_tag="CPT85_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009302373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde oxidase"
                     /protein_id="DAB20611.1"
                     /translation="MQVRKLRDIEVSAVGMGCMGFSHGYGAVPPEEESIRLIHKAFDL
                     GCTFFDTAEAYGPFVNEELVGKAVKPFRDKIILTTKFVPVFQPGQEIPEGKLSKKGVT
                     NALNDSLKRLQTDYIDIYYQHRVPIDSNVEEVAQWMGEFIKEGKIRAWGQSQSTVEQI
                     RKAHAITPLTAIQSEYSMMERMFERDVIPTCKELNIGFVAFSPMASGFLSGKYDKNTQ
                     YKGDDVRRVITRFAPENVEKNQPLLDLLHEVANKKGITPAQISLAWMLKKYDFVVPIP
                     GMRKDERVIENLGAADIELTDAEFEKIEKELDKITIYGNRTDEDIHKLGTVKAIETK"
     gene            complement(1827..>2321)
                     /locus_tag="CPT85_09475"
     CDS             complement(1827..>2321)
                     /locus_tag="CPT85_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002607562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN reductase"
                     /protein_id="DAB20621.1"
                     /translation="GSSNFLADNFIKGAKESGHEVQVYDTAHAKIGPCMGCNACGMNG
                     ACVQKDDMSEVEKLILNSDMIVFVSPIYYFGISAQLKTLIDRFYSFNTPLMGKGLKSA
                     LIVAAWDDSEQVTSFARDHYLGICSYLGFENKGMILGGGCGTPSMTQGTKYPQAAYEL
                     GKSL"
     assembly_gap    2322..2350
                     /estimated_length=29
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2356..2877)
                     /locus_tag="CPT85_09480"
     CDS             complement(2356..2877)
                     /locus_tag="CPT85_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007485549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactoside O-acetyltransferase"
                     /protein_id="DAB20612.1"
                     /translation="MEELRVDVSKLTEEEAKIWKEEVQNVWKLNHTMPYSDEYNELLD
                     KVIPNRGENVDVRSPITGVNLGKVKIGNNVVVMNGSLMMASGGITIDDNTMLAANVQL
                     ISNNHDLDNRAVITCLPIHIKKNCWIGAGATILRGITIGENSVVGAGSVVTKDVPDNT
                     VVAGNPARVIKKI"
     gene            complement(2885..3094)
                     /locus_tag="CPT85_09485"
     CDS             complement(2885..3094)
                     /locus_tag="CPT85_09485"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20613.1"
                     /translation="MLKEILQNAVQNNELKKNTPVELLTHMIISQLYGMMTCWCMSDG
                     EFEPLDWTDKFCKIQIKNILNEYLM"
     gene            complement(3088..3480)
                     /locus_tag="CPT85_09490"
     CDS             complement(3088..3480)
                     /locus_tag="CPT85_09490"
                     /inference="COORDINATES: protein motif:HMM:PF00440.21"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20614.1"
                     /translation="MNKRQQSAINTKKKLIQAALKLLKENGLSSINVEEITKEAGVAK
                     GTFYVYFKRKEDIIAEYSRYPFKEIDDELKNMQDTNLIDKLTYYFHRFMQCVEEPGIN
                     ICREWIKAVIDXRKIARIAANGFMTLRC"
     assembly_gap    3140..3141
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    3893..3894
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4203..4280)
                     /locus_tag="CPT85_09495"
     tRNA            complement(4203..4280)
                     /locus_tag="CPT85_09495"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:complement(4243..4245),aa:Asp,seq:gtc)
     gene            4580..5206
                     /locus_tag="CPT85_09500"
     CDS             4580..5206
                     /locus_tag="CPT85_09500"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20615.1"
                     /translation="MKVMVLERAEFKNGIVFEDGTVINGEIFDVKQPKRAKLNASFKF
                     KPVSYTYNGKTSNIDDPEFVARYAEYKELDKAGLATSAATTAGGMLFHIPLLSEGVSF
                     VKGVWKNPENNRLKSGVVQVYKDSPLSYVEEGKDVYITKDTMFLLKFKSSDSEDLDGV
                     PTNNVTPVNNITPVNTVNKLPVPEQTAPKHIETVHPEDVLREVELNSK"
     gene            complement(5192..8149)
                     /locus_tag="CPT85_09505"
     CDS             complement(5192..8149)
                     /locus_tag="CPT85_09505"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00271.29,HMM:PF12419.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20616.1"
                     /translation="MSVNIKKNNIDELFLNLTENPVGMENKDFRLQLSTIYQLFEDEF
                     EDAFVGKNTPLRNTNMYLLENGDFFVTPTNNFDFYAKSKGSLFRFRSEIKEIDVDGNK
                     QDLIGYVIKQDIIFDYFASFNEILNFEDGTPTFNYLNRFAYTVIKIVEKLHFIPVVKQ
                     TENLFQIKYEIYKNSKDVTNAINSIKSAIPADFITNEDKYGFNKLLASFLNYIIFKFL
                     HIKATKFKDAKAAVYFIKDASNKRFFRGNDLALAISEWLDEIYIGKYNILPEFEILKL
                     TDDEYQLKINVKNTHTGEKHRIEDIYAETVHFENYTNQEIVDLIEKQLTYVARYYPEL
                     EEFFDEDHQFELNMNLNEVYKIIAQISYYLQKASIDVILPEGIDNIITPRASINARVK
                     ASRMSELRDIITSNGASATALNDLFDFSYTIAIGDDKLSVEEYEALTKNAQGLIKYKD
                     HYVLIDKEENAKLIEKVKNPKITDKNKMEILHAALSSQMDDYDFDYDEAFANILKDLT
                     KTEDVPPPESLKGVLRPYQERGFKWLHTNIKKGFGCCMADDMGLGKTIQVISFILKQK
                     ETGALKQPALVVCPTTLLGNWVKEIKHFAPAIKTSVYHGIERQLDTKADVIITTYAIL
                     RIDIEQIKKQKWSMMIIDEAQNIKNPDTSQTQAVKQIKADTKIAMTGTPVENKLTELW
                     SIFDFINRGYLGSIRDFQKSYAIPIEKFKQSNRAEKLRLAISPFILRRLKTDKSIITD
                     LPDKVVLNEYCYLTKTQAALYQSVLDNLMSDISKLNGINRRGMIFKLITALKQICNHP
                     YQYLKSGDISKDVSGKAEQLVSITKQILENDEKTLIFTQYKEMGNILSTILNDELGVN
                     PLFFHGSLNRTQREDLIKDFQENKDSNVMILSLKAGGTGLNLTAATNVIHYDLWWNPA
                     VEDQATDRTYRIGQDKNVMVHRFITLGTFEEKIDEMINNKKDLANVAVFEGEKIITEL
                     SDEEIYKIFSLGV"
     gene            complement(8324..9220)
                     /locus_tag="CPT85_09510"
     CDS             complement(8324..9220)
                     /locus_tag="CPT85_09510"
                     /inference="COORDINATES: protein motif:HMM:PF12146.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20617.1"
                     /translation="MSMLTVEDCIKDLNRCNWYKSEVKETGILKSFLTVKKYENLFYK
                     THSNYSKNEENPIIEDLCDKIEKQKIKTADNITLDIWDINPYRCKSYIIFCQGIGSEK
                     SSIFQQKAYLQFVQNGWGVIAFDYRGRGKSQGEFSQQGASLDVKAVYDYLKAKGIKSS
                     SIGIIGHSMGSGVALDFASKAATAFTILINPFSKASDMAKNIAKKVKMPAIIKRILLA
                     MPSCLFPLKNKFDNVNALSKIESPVLIIHTKKDRTIPVRLARKLYEKNRKSNITYLEI
                     DGYDHEINAEKTDICLDFLHHI"
     gene            9389..9622
                     /locus_tag="CPT85_09515"
     CDS             9389..9622
                     /locus_tag="CPT85_09515"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20618.1"
                     /translation="MKAFRTILSSVLVLSVSATCAFAADKVQTVKTEAYAHPTMFGSQ
                     VQETISADSVYIVGGKMMKSKNQXRTMFLLIPG"
     assembly_gap    9590..9591
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            9631..10818
                     /locus_tag="CPT85_09520"
     CDS             9631..10818
                     /locus_tag="CPT85_09520"
                     /inference="COORDINATES: protein motif:HMM:PF00395.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20619.1"
                     /translation="MSLIKDQQPFANGQVFNPKMPVLRSELAVILSEGFELKGRGSKS
                     YSDIPADYWAKDWIYGALSQGVMIGYPDNKFRPDQPVTKAEVFATIAQLIQVPIDRSL
                     IVPPFKGKDIQYIPRWAITPTKEVVASRLLEQIPDPAKVNNDEYLSKEQVACLVGSLR
                     QDWAYKNSIAKDPNAPASIQGYTPTVLNIKLADRLSARQSNVGDKFSAKTTKDVTING
                     KCFKAGSLVKGEVVEVSRPGIKNPGYIKVKFTKMKDGDQCICFPKNISQAKADVLKNP
                     NFVARLLGMPFSGSARIIGVTGRSAGSIVNVTGNGLEQFGDNISNVFVDTLSLQPVAG
                     VKNIGNAAVTVGKGVFDICKIIVSGAFGIVYEVTDELRYVIVPAYSNNSSLNPGEELT
                     VLF"
     gene            10903..>11138
                     /locus_tag="CPT85_09525"
     CDS             10903..>11138
                     /locus_tag="CPT85_09525"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20620.1"
                     /translation="MLEGYVKYLKFLDSKLSTFFESQSPFIFCQKGCAKCCKNAQFPY
                     SATEMQYLLNGLVTLDIKKQQKIEENFKLILEKK"
     assembly_gap    11139..11189
                     /estimated_length=51
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         3374 a         2022 c         1884 g         3971 t
ORIGIN      
        1 gtcacttttt cctgtatcta atgctctaat ttttctcata tcatcttcag ttatctcaaa
       61 atcgaaaata ttaaagtttt ctgccattct ttccttatgt gttgattttg gaataactat
      121 aacattttct tgtgttaaaa atctcaaagc aatctgggct gcggttttat tgtatttttt
      181 tgaaagtaca actaaagttt cgttgttaaa aatttggtca atgccatgtg ccaaaggccc
      241 ccatgacata atttgagcac cgtatttatc aagccatttg cgctcttctt gctgttggaa
      301 gaaaacgtga gtttctagtt gcacgaccat tnnaccattg gcttaatttc aacccaggat
      361 gcaatatcta catatctatc cggcataaaa tttgaaagcc ctattgcctt taattttcct
      421 gctttatatg cacgctccat tgcacgccaa gtgccgtaat aatcattgta gcattggtga
      481 attaacatta agtccagata atcggtttgt agcttatcca atgattttaa aatagaatca
      541 taggcttttt gctcacctgc atttgtcacc caaattttag atactaaaaa taaatcttct
      601 cttttaattc cggattttgt ccaggcagag ccaacacctt cttcgttata ataggcttgt
      661 gctgtatcaa tcattctgta gcccacttca agggcgtcag ttacacatct ttcacattct
      721 tttggttcaa caagataaac accgtaaccc aagattggca tttcaagccc attatttaat
      781 tttactgttt gcatatgatt attccttttc ggttattttg tttcaatcgc ctttacagta
      841 cccaatttgt gaatatcttc atcggttctg tttccataaa ttgtaatctt gtcgagttct
      901 ttttcaattt tctcaaattc tgcatctgtc aattcaatat cggcagcacc aagattttcg
      961 ataacccttt catcttttct catcccgggg ataggtacta caaaatcata cttctttaac
     1021 atccacgcca aagatatttg agcaggggta attccttttt tattggcaac ctcgtgcagc
     1081 aaatctaaaa gaggttgatt cttttcaacg ttttcaggtg caaaacgtgt tattacacgt
     1141 ctgacatcat cccctttata ttgagtattt ttgtcatatt tccctgataa aaatccgctt
     1201 gccattggcg aaaacgcaac aaaccctata ttaagttctt tgcatgttgg aataacatca
     1261 cgttcaaaca ttctttccat catagaatat tcgctttgaa ttgctgtcaa aggagttatt
     1321 gcatgcgctt ttcttatctg ttcgacagta gactgtgact ggccccaggc tctgattttg
     1381 ccttctttaa tgaattcgcc catccactgt gcaacttctt ctacattaga atcaattgga
     1441 acacggtgtt ggtaatagat atcaatatag tcagtttgaa gtctttttaa agaatcattc
     1501 agggcattag taaccccttt tttagaaagt tttccctcag gaatttcctg tcccggttgg
     1561 aaaacaggca caaatttagt tgttaaaata attttgtctc taaaaggttt tacagcttta
     1621 ccgacgagtt cctcattcac aaaaggtccg taagcctctg ctgtatcaaa aaatgtgcaa
     1681 cctaagtcaa aagccttgtg tattaatctt atggattctt cttctggcgg gactgcacca
     1741 tatccgtgtg aaaaacccat acagcccata ccgactgcgc tgacttctat gtcacgtaat
     1801 tttcttactt gcataattaa gtctccttat aaacttttgc ccaattcata agcagcttga
     1861 gggtattttg taccttgtgt catagatggc gttccacatc cgccacctaa aatcatgcct
     1921 ttgttttcaa aaccaagata tgagcaaata ccaagataat gatctcttgc aaaacttgtt
     1981 acctgctctg aatcgtccca tgctgcaaca attaaagcag atttaagccc tttacccata
     2041 agaggagtgt taaaactgta gaatctgtct ataagtgttt ttaattgggc cgaaatacca
     2101 aaataataaa taggtgagac aaaaactatc atgtcagaat ttaaaattaa tttttctact
     2161 tcactcatat catctttttg aacgcaagca ccgttcatac cgcatgcgtt gcaacccata
     2221 caaggaccta tttttgcatg tgcagtatcg taaacttgaa cctcatgtcc gctttctttt
     2281 gcacctttaa tgaaattatc tgccaaaaaa tttgatgatc cnnnnnnnnn nnnnnnnnnn
     2341 nnnnnnnnnn ctcctttaaa tttttttaat aactctagcc ggatttcctg caacaacagt
     2401 gttatcaggc acatcttttg tcacgactga acctgctcct acaaccgagt tttctccgat
     2461 cgtgattcct cttaagattg ttgcccctgc tccaatccaa caatttttct taatatgaat
     2521 cggtaaacag gttataactg ctctgttatc taaatcatgg ttattagaaa tcagttgaac
     2581 attagccgcg agcattgtat tatcatcaat cgttatgcct cctgaagcca tcattaagga
     2641 accgttcata acaacaacat tattcccgat tttaactttt cctaaattaa ctcctgtaat
     2701 tgggcttcta acgtcaacat tttcacctct gtttgggata actttatcta aaagttcatt
     2761 atactcgtca gaatatggca ttgtatggtt cagcttccat acattctgta cttcttcttt
     2821 ccaaattttt gcttcttctt cagttaattt acttacatca actctaagtt cttccatatt
     2881 tacctcacat caaatattca ttcaatatat ttttaatctg gattttacaa aatttatctg
     2941 tccaatctaa gggttcaaat tctccatctg acatacacca gcaggtcatc attccgtata
     3001 attggctaat aatcatatgt gtcaaaagtt caaccggagt gttctttttt agttcattat
     3061 tttgtacagc gttttgtaaa atttctttta acatctcaaa gtcataaatc catttgccgc
     3121 tatcctggct attttgcgtn ngtcaataac ggcttttatc cattcacggc agatgtttat
     3181 tccgggttct tcaacacact gcataaaacg atgaaaatag tacgttaact tgtcaattaa
     3241 atttgtatct tgcatgtttt tcaattcatc gtcaatttct ttaaatggat atcttgaata
     3301 ttctgcaatg atgtcttctt tgcgtttaaa ataaacatag aatgttcctt tggctacacc
     3361 cgcttctttt gttatttctt caacatttat tgagctgagt ccgttttcct taagcagttt
     3421 taatgctgcc tgtataagtt ttttctttgt atttatagcc gattgttggc gtttattcat
     3481 aggtttttac ctctttttat tttattatac aatatattga cttaaagtca atgacttttg
     3541 gtcaatatgt gacgagtctt ttcttttata attaatgtac ttatagaaga cgacaagaag
     3601 gctagaaatt ttaaatatta ttcagcaaag cacgttaatt tacaccaggg agctaacaat
     3661 catattaacg aatctgttga tgctttttgt tgaaaaaata attttaatat gtgagaatta
     3721 aaaaaataaa acagtatgtc aaaaatcaat aaatgaggct taaaattgaa taaagatttt
     3781 aatttctata gtacttatat ggcagcaaga aacgctggtt atgatgatgc aagcgcttgt
     3841 aaaatcgcaa aagcagctca aacagtagat gataaaacac cagaactaga canncaatac
     3901 tgagcctcta atgccagaaa gtttgcaaga agaccaagag agttagttga aaaacttgaa
     3961 cgaaaacctt ggcattaatc aaaacttttg ttatattccc catacaatat ctatccactt
     4021 ttgcttaaaa tagtcctcat tgaaatttgc gtaaagtatt tttaattttt gcaatttgta
     4081 acgtagtagg tcgttagcaa tgacatattt aacatccgac gaaaagtcct gtaaaaatac
     4141 aatgcgtttt gcgtcatgaa cattcaacca taaaaaaaag aagccttaag gcttctttta
     4201 aatggcggga ccgacgaggc tcgaactcgc gacctcctgc gtgacaggca ggcactctaa
     4261 ccaaactgag ctacgatccc atttagttta ttaaattttc aaccacagcc tcatgactgt
     4321 ataagaatta taatatgcta aatttttatt ttcaacagtt tttattaaat ttgataaatt
     4381 ttttattgtc aattacaaaa accgtttgta taatcgtatt aagtgagttt tcagcagaat
     4441 aaaggttatt tatatgaaaa aaacagtata ttttttaacc cttttagtac tttgtgtgtt
     4501 ttcctctcct gctaatgctg ccaagtctgt gaaagtatca gctttgagtg agtttaattc
     4561 cataagacct gtgaaaacca tgaaagttat ggttcttgag cgtgccgagt ttaaaaacgg
     4621 cattgttttt gaagacggga ctgtaatcaa cggggaaatt tttgatgtta aacagcctaa
     4681 aagggcaaaa ttaaatgctt cttttaaatt taaacctgtt tcgtatactt ataacggaaa
     4741 aacaagtaat attgatgacc ctgaatttgt cgcaaggtat gctgaatata aagagcttga
     4801 taaagccgga ttggctactt ctgccgctac tactgctggt ggtatgctct ttcatattcc
     4861 acttctttca gagggggtgt catttgtaaa aggtgtgtgg aaaaatcctg aaaataaccg
     4921 tctgaagtca ggtgttgtcc aggtatacaa agactctcct ctctcttatg ttgaagaagg
     4981 gaaagatgtt tatattacaa aagatacaat gtttctttta aaattcaaat catctgattc
     5041 tgaagatctt gacggtgtgc cgacaaataa tgttaccccg gtaaataata ttactccggt
     5101 aaataccgta aacaagctgc cggtacctga acaaactgcg ccaaagcata ttgaaacagt
     5161 ccaccctgaa gatgttttgc gtgaagttga attaaactcc aagtgagaag attttgtaaa
     5221 tttcttcgtc tgagagctcg gtaataattt tttcgccttc aaatacagct acatttgcaa
     5281 ggtctttttt gttgttaatc atctcatcga ttttttcttc aaatgtaccg agagtaataa
     5341 atctgtgtac cattacattt ttgtcctgac caatacgata agttctgtct gtagcctgat
     5401 cttctacagc cgggttccac cataaatcat aatgaattac gtttgttgct gcggtcaggt
     5461 taagacccgt gcccccagct tttaatgaca gaatcattac atttgaatct ttattttctt
     5521 gaaaatcttt aatcaaatct tctctttgcg ttctgtttaa agaaccgtgg aaaaagagag
     5581 ggttaacacc aagctcgtca tttaatattg tagagagaat gttgcccatt tctttgtatt
     5641 gtgtaaaaat aagtgttttt tcatcatttt caagaatttg ttttgtaata gaaacaagct
     5701 gttctgcttt cccagatacg tcttttgaaa tatctccgct tttaagatac tggtatgggt
     5761 ggttgcagat ttgttttaaa gctgtgatga gcttaaaaat cataccgcgt ctgttaatac
     5821 cgttgagttt ggagatatct gacataaggt tatcaagaac gctctgatac aatgcagcct
     5881 gtgtttttgt caaataacag tattcgttta acacaacttt atcaggaagg tctgtaataa
     5941 tagatttgtc tgttttcagt cttcttaaga taaatggtga aattgcaagg cgcagttttt
     6001 cggccctgtt ggattgttta aatttttcta taggtatagc atagcttttt tgaaaatctc
     6061 taatagagcc aaggtatcct ctgttaatga agtcaaagat actccaaagt tctgtcagtt
     6121 tattttcaac aggtgtacct gtcattgcta tttttgtatc tgccttaatt tgttttacag
     6181 cctgtgtttg agaagtatcc ggatttttga tgttttgggc ttcgtcaata atcatcattg
     6241 accatttttg ttttttaatc tgctcaatat ctattctcaa aattgcatag gttgtaataa
     6301 taacatctgc ttttgtatca agctgtcttt caattccgtg ataaacggat gtttttatag
     6361 caggtgcaaa atgtttaatc tctttaaccc agttgcccag aagtgttgtc ggacatacaa
     6421 caagagcagg ttgtttcagt gcaccggttt ctttttgttt tagtataaaa ctgattacct
     6481 gaatagtttt accaagcccc atgtcgtcag ccatacagca tccaaaacct tttttaatat
     6541 ttgtatgcag ccatttaaat ccacgttcct gataaggtct taaaacacct ttcagtgatt
     6601 ccggcggcgg aacatcttct gtttttgtaa ggtcttttaa tatgtttgca aaggcctcat
     6661 catagtcaaa atcatagtca tccatttgag aagataatgc cgcatgaaga atttccattt
     6721 tgtttttatc tgtaatttta ggatttttaa ctttttcaat taactttgca ttttcttcct
     6781 tgtctatgag cacgtaatga tctttgtatt ttatcaaccc ttgagcattt tttgtcagtg
     6841 cttcgtattc ttctacagac aacttgtcat cacctattgc tatagtgtat gaaaaatcaa
     6901 acaagtcgtt gagcgctgtg gccgatgcac cgttagaggt tattatgtca cgaagttcgg
     6961 acattctgga ggcttttact cttgcattga tagatgcacg aggcgtgata atgttatcta
     7021 tgccttccgg taaaatcacg tcaatagaag ctttttgaag ataatatgat atttgagcaa
     7081 ttattttgta aacctcgtta aggttcatgt taagttcaaa ttggtggtct tcatcaaaaa
     7141 attcttccag ctcaggatag taccttgcta cataagttag ttgtttttcg ataaggtcga
     7201 caatttcctg atttgtataa ttttcaaaat gaacagtttc tgcataaata tcctcaatcc
     7261 tgtgtttttc gccggtatgg gtatttttta catttatttt tagctgatat tcatcatctg
     7321 taagctttaa tatttcaaac tctggaagta tattgtattt acctatatat atttcatcaa
     7381 gccattctga tattgccaaa gcaaggtcat tgccacggaa aaatcttttg ttagatgcgt
     7441 ctttaataaa ataaaccgct gcttttgcgt ctttaaattt tgttgcttta atatgtagaa
     7501 acttgaaaat aatgtaattt aaaaaacttg ccagaagttt gttaaaaccg tatttatctt
     7561 cgtttgttat aaaatcagcg ggtatagctg attttataga gtttattgca tttgttacat
     7621 ctttgctgtt tttgtatatt tcgtatttga tttgaaaaag gttttctgtt tgttttacaa
     7681 cagggataaa atgcagtttt tcaactattt taatcactgt ataagcaaac ctgttgaggt
     7741 aattaaatgt tggcgtaccg tcttcaaagt ttaggatttc gttaaaactg gcaaagtaat
     7801 caaagataat atcctgtttt attacataac caatcaagtc ttgtttgttg ccgtctacgt
     7861 caatttcttt gatttctgaa cgaaaacgga ataaagagcc cttggacttt gcataaaaat
     7921 caaagttgtt tgtaggggta acaaaaaaat caccgttttc aagaagatac atgtttgtat
     7981 ttctcaacgg tgtatttttc ccgacaaaag catcttcaaa ttcatcttca aaaagctggt
     8041 aaatagtgct cagttgaaga cgaaagtctt tattttccat accgacaggg ttttctgtca
     8101 gattcaaaaa caactcatct atattattct ttttgatatt tacactcata aggacccaat
     8161 tttctatctt aatgtttcgc taaactgctt accgaaggtt cattatatca aaaagattaa
     8221 cgaaaataaa ataaaaaatt ttctgttaat ataatttttt gggagtcttt ttgctgtaaa
     8281 tatcagccag tacatacata tacatacttc tgcaaatttt agttcatata tgatgcaaaa
     8341 agtctagaca aatatctgtt ttttccgcat ttatttcgtg gtcgtaaccg tcaatttcca
     8401 gatatgttat gttgcttttt ctgttctttt catagagttt tcttgccagt ctgacaggaa
     8461 tggttcgatc tttttttgtg tgaataatca aaacaggact ttctatttta gataaagcat
     8521 ttacattatc aaatttattt tttaaaggga ataaacaaga aggcattgca agcaaaatac
     8581 gttttataat agcaggcatt tttacctttt ttgcaatgtt ttttgccata tcagatgctt
     8641 ttgaaaatgg atttatcaat atagtaaaag cagtagctgc cttgcttgca aaatccagag
     8701 caacaccgga gcccattgag tggccgatta ttcctatgga tgatgattta attccttttg
     8761 cttttaaata atcgtatact gctttcacat caagagatgc accttgctgt gaaaattctc
     8821 cctgactttt tcctcttcct ctgtaatcga aagcaattac accccagccg ttttgaacaa
     8881 actgaagata cgctttttgc tgaaagatgc tgcttttttc gcttcctatt ccctgacaga
     8941 aaataatata acttttgcac ctgtatgggt ttatatccca tatatcaagt gttatattgt
     9001 cagctgtttt tattttttgc ttttctattt tatcgcacag gtcttcaata ataggatttt
     9061 cttcattttt gctgtagttt gagtgtgttt tgtaaaaaag attttcatat ttttttactg
     9121 ttaaaaaact ttttaaaatt cctgtttctt ttacttctga tttataccag ttgcagcggt
     9181 tcaaatcttt gatacaatct tctacagtca acatagacat aattcctccg tccgtttttt
     9241 tatcaataac aatttagcct atgtttattt aaaagtgtaa tttacagtct gttataaaat
     9301 gcttgacgat atattaataa aattggataa taagatacac gagttttctg gaaaaagaaa
     9361 aagtagtatt acaagttagg agtaaattat gaaagctttc agaacaattt tgtcttctgt
     9421 tcttgtactc tctgtatctg caacatgcgc atttgccgca gataaagtac agactgtaaa
     9481 aacagaggct tatgctcacc cgacaatgtt tggttctcaa gttcaagaaa caatcagtgc
     9541 cgattctgtc tatattgtag gcggtaaaat gatgaaatcc aaaaaccaan naaggacaat
     9601 gttcttgttg attcctgggt aaaagacata atgtctttga taaaagacca gcagcctttt
     9661 gctaacggtc aggtctttaa tcctaaaatg cctgttttgc gttcagaatt ggctgtaatc
     9721 ttatcagaag gttttgagct caaaggcaga ggttcaaaat catatagcga tattcctgct
     9781 gattactggg caaaagattg gatatatggc gcgcttagtc agggtgtcat gataggttat
     9841 cctgataata aattcagacc cgaccagcct gttacaaaag cagaagtatt tgcaaccatt
     9901 gcacaattga ttcaggttcc tattgacaga agccttattg ttccgccgtt taaaggcaaa
     9961 gatattcaat atattccaag atgggcaatt actcctacaa aagaggttgt tgcatcaaga
    10021 ctgttggaac aaattcctga ccctgcaaaa gttaataacg acgagtatct ttcaaaagaa
    10081 caggttgctt gccttgtcgg ttcattaaga caggactggg catacaaaaa ctcaatcgca
    10141 aaagatccta atgctccggc atctattcaa ggatacactc cgacagtact caatatcaaa
    10201 cttgctgaca gattatctgc aagacaatca aatgtgggtg ataaatttag tgcaaaaaca
    10261 acaaaagatg tgactatcaa cggtaaatgc ttcaaagcag gttcacttgt taagggtgaa
    10321 gttgtagaag tatcaagacc aggcattaaa aaccccggtt atattaaagt aaaatttact
    10381 aaaatgaaag atggtgatca atgcatttgt ttcccaaaaa acatatcaca agctaaagca
    10441 gatgttttga aaaatcctaa tttcgttgca agacttttgg gtatgccttt tagcggttca
    10501 gccagaatca tcggtgttac aggtcgttcg gcaggttcaa tcgtgaatgt aacaggcaac
    10561 ggacttgaac agtttggtga taatatttcg aatgtttttg ttgatacatt atcattgcaa
    10621 ccggttgcag gtgttaaaaa catcggtaat gctgctgtta ctgtaggcaa aggcgtattt
    10681 gatatttgca aaatcatcgt aagcggtgca tttggtattg tgtatgaagt tacagatgaa
    10741 ttaagatatg tgattgtacc tgcatattct aacaactcaa gcttgaaccc cggtgaagag
    10801 ctgactgtgt tgttctaata tacaaagaca atttataaaa aaaggagaat agaaatattc
    10861 tccttttttg ttgtgctata cttttttgta aagagaggca ttatgcttga gggatatgta
    10921 aagtatttga aatttttaga ctcgaagctt tcaacttttt ttgaaagcca aagccctttt
    10981 attttttgtc aaaaaggatg cgcaaaatgc tgcaaaaacg cacaatttcc atattctgcc
    11041 acagaaatgc agtatttgct aaacgggctg gtgacactag atatcaaaaa gcaacaaaaa
    11101 atagaagaga attttaaatt aattctggaa aagaaaaann nnnnnnnnnn nnnnnnnnnn
    11161 nnnnnnnnnn nnnnnnnnnn nnnnnnnnng tccttttttg attgatgacg tatgctctgt
    11221 atatgagtat agaggggtgc tttgcaggac attcggtttg atgacaaaat acgatacggg
    11281 taagctaaaa gctccttttt gtacatttga agggctaaat tattcaaacg ttttgaatc
//
LOCUS       DABS01000208            6952 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_10636, whole genome shotgun sequence.
ACCESSION   DABS01000208 DABS01000000
VERSION     DABS01000208.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6952)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6952)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6952
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..2144)
                     /locus_tag="CPT85_09530"
     CDS             complement(<1..2144)
                     /locus_tag="CPT85_09530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002249718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system ATPase TssH"
                     /protein_id="DAB20606.1"
                     /translation="MDFNKLTNQAQEIMFSAQQLMAKFQNTQLEPSHIMMAMLEAKEG
                     IAKDYMSDLKLDRPQFVDAVMSELNNLPTVEQPVNTQQLYLSQETINLLDMAQSQAET
                     LKDTYISIEHILLAMTELQGSKIKTLLDNFGVTRNKILNEMKKIRGQNKVDSKDSEEK
                     FKALEKYSQNLTKLAQRGKLDPVIGRDEEVRRVIQVLNRRTKNNPVLIGEPGVGKTAI
                     VEGLAQRIVRGDVPEGLKDTQLIALDLGALVAGAKFRGEFEERLKAVLKEVEASDGEI
                     ILFIDELHTVIGAGATEGSMDAGNLLKPMLARGVLRTVGATTINEYRKYIEKDAALER
                     RFQPVMVDEPSVDDTISILRGLKERYEIHHGIRIKDAALVAAAKLSDRYITDRFLPDK
                     AIDLIDEAASALRIDIDSMPEEIDSLVRQKMQLEIERKAIQKEEQTEDNIKKIDGLNK
                     TINELDEKITKLRTQWELEKNSIMDEAQIKEEIEKTKAQIDIAERDADLERAAELKYG
                     KMIELQKRLEDVQKDVKEKPKNQLLKEEVDEDDIAEIVSKWTGIEVSRLVESERDKLL
                     RMEDFLHKRVIGQDEAVDVVSDAVRRARSGLKDPKRPIGSFIFLGPTGVGKTELAKSL
                     AEFLFNDEDALIRIDMSEYMEKHSVARLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLF
                     DEIEKAHPDVFNIMLQILDDGRLTDSKGRTVD"
     gene            complement(2232..2975)
                     /locus_tag="CPT85_09535"
     CDS             complement(2232..2975)
                     /locus_tag="CPT85_09535"
                     /inference="COORDINATES: protein motif:HMM:PF02405.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20601.1"
                     /translation="MINFLGECIQNLISTLKFIFSGRAKFGSVITQAAMISYDSLSIS
                     LTIVFIAAAVISLQVSKQFLMSGAESYVGGFIAVALVREIAPGFAALAIGARAGTAIC
                     AEVANMKVTEQVDAIKTLGVDPVGYYFAPRLIASALTVPMVVILAEFIGIVGGMMVAY
                     FAIGLHPNRFMNTVWLLLQAKDIYISIFKAFIFGILITLVCATQGYKTYGGAKDVGLS
                     TTKSAILSTFYLLVADFIINIIFYVHVGI"
     gene            complement(2968..3882)
                     /locus_tag="CPT85_09540"
     CDS             complement(2968..3882)
                     /locus_tag="CPT85_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015169209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched chain amino acid aminotransferase"
                     /protein_id="DAB20602.1"
                     /translation="MTTEYVYLDGEFVDAKTASIPVRNHAFLYGTSVFEGIRAYYNKE
                     EDQLYAFRMKEHFERLINSCKIMHMDPKFTVEEFCGLTKELLKKNGYKTDAYIRPQVY
                     KNALKIGPGLLDNPDAVLIFSFAMGDYIDLSKGLSVCVSNWRRNDDNAIPPRAKVAGS
                     YANTALIVTDAKLAGFDDAIVLDQAGKVTEGSAMNLFLXDTLVTTQTTDNILVGVTRN
                     TILELGKNVLGLKVCEREISRTELYVADEAFYCGTGAQVSPITSIDHRPVGKGVVGEH
                     TKELQKLYFDVVKGKVEKYKKWCTPIYD"
     assembly_gap    3286..3287
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    4009..4032
                     /estimated_length=24
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4114..6027
                     /locus_tag="CPT85_09545"
     CDS             4114..6027
                     /locus_tag="CPT85_09545"
                     /inference="COORDINATES: protein motif:HMM:PF02446.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20603.1"
                     /translation="MICCENKAEKKDMKKFKKVCHKALKELGKKNFALIVHGNSFPAI
                     SGKNTGFGTQNSEAGKNLMDFASGVFNAIQLGPQGKTKACDSSPYTGTIFSINPLFID
                     LEQLTTKEWGNILSEQTYKKICDENPNKDINKTAYSYIVKAQDEALQEAYVNFKQWND
                     KKLNKEFEKFKKENDFWLSKDALYEALVIENNNDYWPLWDNKTDRNLFNPKTEEEKKA
                     SFLREKELRLKYADEINYYAFCQFVAAKQNEQTKKYALKHDLKLIADRQVAFSDRDTW
                     AYQSLFLEGWMLGCPPDYFSKDGQAWGFPVVDPKKMFNEDGSLGEAGELLKRLYKKMF
                     KENPGGVRIDHIVGLIDPWVYKAGKKPMPEQGAGRLYSSPEHPELSQYAIATMDDLNL
                     EIGSDKEKRVKKLSKEQIKKYGAMIEKIVIAAAKEEGLNKDAIVCEDLGTLTFPVESV
                     MKEYDLQGMRLTQFVKHEMPEHPYRCCNIVERSWAMVGTHDNEPISMWADSMINTHEG
                     YLNVVNLVDDMYSELKGKDRDDLIVKLTTDAKALMNVKLAEIFASKAANVQVFFTDFF
                     GIKATYNTPGTSGDKNWSLRVPDNFEEVYCNNCKDGLALNLPLILKMAIEARGSKFAK
                     KQDKLLKELEKLI"
     assembly_gap    6131..6152
                     /estimated_length=22
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6153..6674
                     /locus_tag="CPT85_09550"
     CDS             6153..6674
                     /locus_tag="CPT85_09550"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20604.1"
                     /translation="MKYGVCAFFPTLATDTVENLQKQISEIKKAMQLQENSLEPLAKI
                     LGVHLEACFLNPVKKGIHDENLLLKPTIENFKLLEDDIIKIVTLAPELDEGNLLCAYL
                     KEKGIRVSAGHCMGADLSHVDQVTHLYNAMGAFSHRTQSTVVSALCNDNIYTEIIADG
                     IHVQKDVLXEQNL"
     assembly_gap    6658..6659
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6731..>6952
                     /locus_tag="CPT85_09555"
     CDS             6731..>6952
                     /locus_tag="CPT85_09555"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20605.1"
                     /translation="MDFCSKKVFLQNGKAVDSNGTIAGSTAFVYDIIKMLVNQGMLDL
                     RTACAMASKNLTYIQDLNSQLYWDSSCNIQ"
BASE COUNT         2147 a         1348 c         1263 g         2144 t
ORIGIN      
        1 aagtcaactg ttctgccttt agaatctgtc aaacggccgt catcaagtat ttgaagcata
       61 atattaaaca catcggggtg tgccttttct atttcgtcaa aaagcacaac cgagtagggt
      121 tttcttctga cggcttctgt taactgtcca ccttcatcat agccgacata acccggagga
      181 gctccgacaa gtcttgccac agagtgtttt tccatatact cggacatatc aattctaata
      241 agagcgtctt cgtcgttaaa aaggaattct gctaatgatt ttgcaagctc ggttttacca
      301 acgcctgtcg gccctaaaaa gataaatgaa ccaatcgggc gtttcgggtc ttttaagcct
      361 gaacgggcac ggcgtacagc gtcagagaca acatcaacgg cttcatcctg accgattacg
      421 cgtttgtgca aaaagtcttc cattcgaagc agtttgtctc tttcgctttc aacaagcctt
      481 gaaacctcaa tacctgtcca tttgctcaca atctcagcaa tatcatcttc atcaacttct
      541 tctttcaaaa gctgattttt aggtttttct ttaacatctt tttgtacgtc ttccaaacgt
      601 ttttgcagct caatcatttt gccgtatttt aattcggcag ctctttcaag gtcagcgtcg
      661 cgttcggcaa tatcaatctg ggcttttgtc ttttctatct cttctttgat ttgagcctcg
      721 tccataatac tgtttttttc cagttcccac tgggttctga gttttgtaat tttttcgtca
      781 agctcattga tggttttatt caagccgtca atttttttga tattgtcttc ggtctgttct
      841 tctttttgga tagcctttct ttcaatctca agctgcattt tctggcggac aagagagtct
      901 atttcttcgg gcatggaatc aatatcaatt ctcaaagcag aagccgcctc atcaataagg
      961 tcaattgcct tatcagggag gaatctgtca gtaatgtacc tgtcagacaa cttagctgca
     1021 gcaacaaggg cagcatcttt tattctgatt ccatggtgaa tttcataacg ttctttcaag
     1081 cctcttaaaa tacttattgt gtcatcaaca gacggttcat ccaccattac gggctggaat
     1141 cttctttcca gtgctgcatc tttttcaatg tattttctgt attcgttgat ggttgtagct
     1201 ccgacagttc ttaatacacc tcttgcaagc attggtttta aaaggttgcc agcgtccata
     1261 gatccttctg tagcacctgc ccctattact gtgtgcaatt catcaataaa cagaataatc
     1321 tctccgtcag aagcctctac ttcttttaaa acagctttta aacgttcttc aaattcacct
     1381 ctgaattttg cacctgcaac taatgcaccg aggtctaggg caataagctg tgtatcttta
     1441 aggccttcgg ggacatcgcc tcttacgatt ctttgagcca gaccttctac aattgcggtt
     1501 ttacccacac cgggttcacc aattaaaaca gggttgtttt ttgtacgtct gtttaagacc
     1561 tgaataacac gtcttacctc ctcgtcacgg ccgattacag ggtcaagctt gcctctttgt
     1621 gctagttttg taaggttttg agagtatttt tcaagtgctt tgaatttttc ttcagaatct
     1681 tttgagtcca ccttattttg tcctcttatt tttttcattt cgttcaaaat tttgtttctt
     1741 gtaacgccaa agttgtccag cagagttttg atttttgaac cctgtaactc tgtcatagca
     1801 agcaatatgt gttctatact tatataagta tctttcaaag tttcagcctg tgattgagcc
     1861 atatcaagaa ggtttattgt ttcttgagaa agatacagct gctgcgtgtt aacaggctgc
     1921 tcaactgtag gaagattatt gagttctgac attacagcgt caacaaactg cggacggtca
     1981 agtttcaggt ctgacatata gtcttttgca attccttctt ttgcctcgag cattgccatc
     2041 attatatgag acggttcaag ctgtgtattt tgaaactttg ccatcagttg ttgggcggag
     2101 aacatgattt cttgagcctg attagttaat ttattaaaat ctatcatagt atatacctca
     2161 ctttttattt tatattttta ttttaatgag gttttacgaa aaatcagcaa aaattaactt
     2221 ttatttaatg tttatatacc tacatgcacg taaaagatga tgttgataat gaaatcagcc
     2281 acaagaagat aaaaagtaga caaaatagcg gattttgtgg tggaaagacc aacatctttt
     2341 gctccgccgt atgttttgta cccttgagtt gcacatacca aggtaattaa tataccgaat
     2401 ataaatgctt taaaaatgct tatataaata tcttttgcct gaagcagaag ccacactgtg
     2461 ttcataaatc tattagggtg aagtccgatt gcaaaataag caaccatcat cccgcccaca
     2521 atacctataa attcagcaag aataacaacc atcggcactg ttaaggcaga agctatcaaa
     2581 cgcggcgcaa agtaataacc gacagggtca acaccgagtg tttttattgc atccacctgt
     2641 tctgttacct tcatgtttgc aacttccgcg catattgcag taccagctct tgcacctatt
     2701 gccagtgcag caaaccccgg tgcaatttct cgaaccagag caactgcaat aaatcctccg
     2761 acgtagcttt cggctccgct catcaagaac tgttttgata cctgcaatga aataaccgca
     2821 gctgcaataa acacaattgt caaagatatg gacaacgaat catagcttat cattgcagcc
     2881 tgagtaatca cagagccgaa ttttgcacgt ccgctgaata taaattttag tgtacttatt
     2941 aaattttgaa tacattcgcc taaaaaatta atcataaata ggtgtacacc attttttgta
     3001 tttttctacc ttgcctttta caacgtcaaa gtacagtttt tgtaattctt ttgtgtgttc
     3061 tccgacaaca cctttgccga caggcctgtg gtcgattgat gtaatcgggc tgacctgagc
     3121 gcctgttccg caatagaatg cttcgtcagc aacataaagc tctgttcttg aaatttctct
     3181 ttcgcagact ttcaatccaa gcacgttttt acctaattca agaatagtgt ttcttgttac
     3241 accaacgaga atgttatctg ttgtttgagt tgtcacaaga gtgtcnncaa ggaacaggtt
     3301 catcgcagaa ccttctgtaa cttttcctgc ctgatcaaga acaatagcat catcaaaacc
     3361 tgcgagcttt gcatctgtaa caatcaaagc cgtattagca taagagcccg ctacctttgc
     3421 ccttgggggg atagcattgt catcgtttct tctccagtta gagacacata cgctcaaacc
     3481 tttgcttaaa tcgatataat cacccattgc aaaagaaaaa atcaaaacag catctgggtt
     3541 gtcaagcaaa ccagggccga ttttcaatgc atttttataa acctgaggtc ttatgtaagc
     3601 gtctgttttg taaccgtttt tctttaataa ttcttttgta agaccgcaaa attcttctac
     3661 tgtgaatttg ggatccatat gcataatctt gcagctgtta ataagtcttt caaagtgttc
     3721 tttcattctg aaagcataaa gctggtcttc ttctttatta taataagccc taatcccctc
     3781 aaacacggaa gtaccatata aaaatgcgtg gtttctgaca gggatggaag ctgtttttgc
     3841 atctacaaac tcgccgtcca agtaaacata ttctgttgtc atcttaactc tccttttcgg
     3901 ctgtgacact atttgttttt taattatttt attatggcga tttttcacag tcttggcaag
     3961 gagatttata attatttaat ttaaatttgg taaagaaatg taaaaacann nnnnnnnnnn
     4021 nnnnnnnnnn nnaatatact agatggtagg ataaatttac aaaataaatt acaaaataaa
     4081 attaatatgg tagtcaagaa ggggtaagtt tttatgattt gttgcgaaaa caaagcagag
     4141 aagaaagata tgaaaaaatt caaaaaagtt tgccacaagg cgcttaaaga attgggtaaa
     4201 aagaattttg cactgattgt tcacggaaac agtttccctg caatttcagg taaaaataca
     4261 ggttttggca cacaaaattc cgaagcagga aaaaacttga tggattttgc ctcaggtgtt
     4321 ttcaacgcta tccaattagg gccgcaaggt aaaacaaaag cgtgtgactc ttcaccttac
     4381 acaggtacaa ttttttctat aaatcccctg tttattgacc ttgaacaatt gactacaaaa
     4441 gaatggggaa atattttatc agaacaaact tacaaaaaaa tctgtgacga aaatcctaat
     4501 aaagatataa acaaaactgc ttattcttac attgttaaag cacaagacga agctcttcaa
     4561 gaagcttacg taaactttaa acagtggaac gataaaaaac ttaataaaga atttgaaaaa
     4621 ttcaaaaaag aaaatgattt ttggctttcc aaagatgcac tgtatgaagc tcttgtaatt
     4681 gaaaacaaca acgactactg gcctttgtgg gataacaaaa cagatagaaa cctcttcaat
     4741 ccgaaaacag aagaagaaaa gaaagcctct ttcttaagag aaaaagaatt aagactaaaa
     4801 tatgctgatg aaataaacta ttacgcattc tgccagtttg ttgcagcaaa acaaaacgag
     4861 cagactaaaa aatatgccct taaacatgat ttaaaactga ttgcagacag acaggttgct
     4921 ttctctgaca gagatacctg ggcttatcaa tcactgtttt tggaaggctg gatgctcggt
     4981 tgtcctccgg actatttttc aaaagacggt caggcatggg gattccctgt tgttgaccct
     5041 aaaaaaatgt ttaacgaaga cggttctttg ggtgaggctg gtgagcttct taaacgtctt
     5101 tacaaaaaaa tgtttaaaga aaaccctggc ggtgtaagaa ttgaccacat tgtaggtctt
     5161 attgacccct gggtttacaa agcaggtaaa aagcctatgc ctgaacaagg tgcaggaaga
     5221 ctttactctt cgcctgaaca ccctgaactg tcacagtatg caattgcaac aatggatgat
     5281 ttaaaccttg agatcggctc agacaaagaa aaaagagtta aaaaattatc aaaagaacaa
     5341 atcaaaaaat acggtgcaat gattgaaaaa atcgttattg cagcagcaaa agaagaaggc
     5401 ttgaacaaag acgcaatcgt ttgtgaagac cttggcacac tcacattccc tgttgagtct
     5461 gtaatgaaag aatatgacct tcagggtatg agattaaccc agtttgttaa acacgaaatg
     5521 cccgagcacc cttacagatg ctgcaacatt gttgaaagaa gctgggcaat ggtaggtact
     5581 cacgacaacg aacctatcag catgtgggct gattctatga ttaacacgca tgaaggatac
     5641 ttgaatgttg taaaccttgt tgatgatatg tattcagagc ttaaaggcaa agacagagat
     5701 gacttgatag ttaaacttac aacagatgca aaagcattga tgaacgttaa gcttgcagaa
     5761 atctttgctt caaaagcagc aaatgtacag gtgttcttta cagatttctt cggaatcaaa
     5821 gcaacttaca acacccccgg tacatcagga gacaaaaact ggtcgttgag agttcctgac
     5881 aactttgaag aagtttattg caacaattgc aaagatgggc ttgctttgaa tcttccgttg
     5941 attttaaaaa tggcgataga agcaagaggc tcaaaatttg ctaaaaaaca ggataaactc
     6001 ttgaaagaat tggaaaaact tatataatat aaaataatgt acgacacctg tttacaatca
     6061 gttgataatt taatcgaaac tgaagctctc gttgaacagc atattcacgg gggcttcggt
     6121 atagatttct nnnnnnnnnn nnnnnnnnnn nnttgaaata tggtgtttgt gcgttttttc
     6181 ctaccctagc tacagacact gtagaaaatc tacaaaagca gataagtgaa ataaaaaaag
     6241 caatgcagct tcaagaaaat tctttagagc ctttggcaaa gattttgggc gtgcatttag
     6301 aagcctgttt tctaaatcct gttaaaaaag gaatacacga tgaaaacctg cttttaaaac
     6361 caactattga aaactttaaa cttcttgaag atgacataat taagatagta acgcttgctc
     6421 cagagttaga tgagggcaat cttctttgtg cttatcttaa agaaaaagga ataagagtct
     6481 ctgcagggca ctgtatgggt gcagatttgt cccatgttga tcaggtaact catctttata
     6541 atgcaatggg agctttttct cacagaacac aatcaacagt tgtatcagca ctttgcaatg
     6601 acaatattta tacagaaatc attgcagatg ggatacatgt tcaaaaggat gttttaanng
     6661 aacaaaacct ttaaataaaa ttattttgat aagcgatgca ctgcctatca ctcattctga
     6721 taaagactct atggactttt gttctaaaaa agtattctta caaaacggaa aagctgtaga
     6781 cagcaacgga acaattgcag gtagtacggc ttttgtttat gacatcatta aaatgcttgt
     6841 aaatcaggga atgctggact tacgcacagc ttgtgcaatg gcatctaaaa atctgacata
     6901 tatacaggat ttaaattctc aactgtattg ggatagcagc tgcaatattc ag
//
LOCUS       DABS01000209            3314 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_27731, whole genome shotgun sequence.
ACCESSION   DABS01000209 DABS01000000
VERSION     DABS01000209.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3314)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3314)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3314
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            173..610
                     /locus_tag="CPT85_09560"
     CDS             173..610
                     /locus_tag="CPT85_09560"
                     /inference="COORDINATES: protein motif:HMM:PF01467.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate cytidylyltransferase"
                     /protein_id="DAB20594.1"
                     /translation="MSDKTKRVVGFTLGCFDLFHIGHINLLRNARALCDTLIVGVCSD
                     EYMLNNKREPIYALNDRMEILKACKYCDVVVPEDTLEKVELYNKYKFDILFVGSDWYG
                     DERYIVWEKQLKEIGVSVVYLPYTNEVSSSKIIQKIAQMRQIH"
     gene            612..1247
                     /locus_tag="CPT85_09565"
     CDS             612..1247
                     /locus_tag="CPT85_09565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009301508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="DAB20595.1"
                     /translation="MDNKKSLTYWQSKAESNPTIKASKVSDINDFSDYDRDFILNYAD
                     ENAKILDLAAGTGITLNKYYDKVKFITAVEKFKQFSDFIVKSSNIEVINSDIMLFEPE
                     CTYDLILMFGVTHYFNRAESEFLYKKYKKVLNKNGKLIIKHQFGLKEDVTVEGYSEEL
                     KCNYFSQYRHIDAEAELLKSIGFKTIEVIDIYPKECNRWENTHFYAIVAAV"
     gene            1225..2520
                     /locus_tag="CPT85_09570"
     CDS             1225..2520
                     /locus_tag="CPT85_09570"
                     /inference="COORDINATES: protein motif:HMM:PF04464.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol--glycerophosphate
                     glycerophosphotransferase"
                     /protein_id="DAB20596.1"
                     /translation="MQLLRQFDKIKNLSLAILIVFCWQYPACAYIDPGTGSMLFSVVV
                     GISATLFFLFNSLIIKLKMLLFSQKVFLYLYTRIPFLIYSEGRQYFNVFKPVLDEFEK
                     RQIPLVFYTSSPDDPFFDCHYDYVKGEYIGKSFEAYLKLAFVKADVCLMTTPGLDVFQ
                     LKRSKYVKYYCHIFHAVTSSLVYRLFSLDYYDAVLCDAEFQIPMIREIESKRKLKPKE
                     LVVTGCTYMDLLAKRAESISKNNDDFKILVAPSWGENGILKKYGSNLLDLLAESDWNI
                     VIRPHPQSLIVEKDIIQNLKNRYKDKQNISWNFDVDNLNILSQADVLISDFSGIIFDY
                     AFLFNRPFVYVNQEMNREIYDMSDLDEEPWRYKAIREIGTELTKDNFKNIVSIIKNMS
                     NNQQVFDAIQKAKNIAWQKQGESAKNVADFLIKKQKELS"
     gene            2520..>3314
                     /locus_tag="CPT85_09575"
     CDS             2520..>3314
                     /locus_tag="CPT85_09575"
                     /inference="COORDINATES: protein motif:HMM:PF02096.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20597.1"
                     /translation="MLNILFQIIIYPLYAGLETIFSFFFDFFCCNICLTIFVISFLIN
                     LICLPLYINAEKLQKQERDIQNKMSKRVECIKKNFKGDERHMLLATYYRQNNYHPIMS
                     LRTSLSLLLQIPFFTAAYFFFSHLQLLHGLSMGIIEDLSKPDNLLHIXGSISVNVLPI
                     FMTVINLVAGAIYSREQSKKDKIQILTLALVFLAILYNSPSGLVLYWTFNNFFSLIKN
                     IGLXLKSAKPKAFLKTLLLFSAGVFLFYMFKVYDYCLSVLFAFFAFI"
     assembly_gap    2968..2969
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    3184..3185
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1098 a          495 c          602 g         1115 t
ORIGIN      
        1 aattctgttc acaaaaaaag attagcttta ttcatcgtca tatgcaattg caaaaatgag
       61 tatttatata gcttatgagt ttaatattct gttgtttata atcagttttt attataagct
      121 ggtttgtata atgttactct tttaaaaaaa tgcaagagct tgaaggagat ttatgtcaga
      181 caagacaaaa agggttgtgg gttttactct gggatgtttt gatttattcc atattggtca
      241 tataaacctg ttaagaaacg caagagcact gtgtgacact ttaatcgtgg gagtatgctc
      301 tgatgagtat atgctgaaca acaaaagaga acctatatat gccctcaatg acaggatgga
      361 aatattaaaa gcctgcaaat attgtgatgt agttgtgccc gaagacacac tcgaaaaagt
      421 ggaactttac aacaaatata agtttgatat tctgtttgtc ggctctgact ggtatggtga
      481 tgaaagatat attgtctggg aaaaacagtt aaaagaaatt ggcgttagtg ttgtttacct
      541 tccttacaca aatgaggtaa gctcttcaaa aattatacaa aaaattgcac aaatgagaca
      601 gattcattaa aatggacaac aaaaaaagct taacatactg gcaaagtaaa gccgagtcta
      661 atcctacaat aaaggcttca aaagtttctg atatcaatga tttttctgat tatgacagag
      721 attttatttt aaactatgct gatgaaaatg caaaaatatt ggatttggct gccggcacag
      781 ggattacatt aaacaagtat tatgacaagg taaaatttat caccgctgtt gaaaagttta
      841 aacagttttc tgattttatt gtaaaatctt ccaatattga ggtaataaac tctgatatta
      901 tgctgtttga gccggagtgt acttatgatt tgattctgat gtttggtgta acacattatt
      961 ttaatcgtgc agaatctgaa tttttatata aaaaatacaa aaaagttttg aacaaaaacg
     1021 gaaagttgat aattaaacac cagtttggcc taaaggaaga tgttacagta gagggatact
     1081 ctgaagagtt aaagtgtaat tatttttccc aatacagaca tatagacgca gaagccgaat
     1141 tgttaaaaag catagggttt aaaacaatag aagtcattga tatttaccct aaagaatgta
     1201 acagatggga gaatacacat ttttatgcaa ttgttgcggc agtttgataa aataaaaaat
     1261 ctgtctctgg caatattaat agttttttgc tggcaatatc ctgcgtgtgc ttatattgac
     1321 cctggtacag gcagtatgct tttttctgtt gttgttggta ttagtgcaac tttatttttt
     1381 ttgtttaact cattaatcat taaactgaaa atgcttttgt tctcacaaaa ggtattcttg
     1441 tatctttata caagaatacc ttttcttatc tattctgaag gaagacagta cttcaatgta
     1501 tttaaacctg tgctggatga atttgaaaaa agacaaattc cgctcgtatt ttatacatcc
     1561 tcaccggatg atccgttttt tgactgccac tatgattatg taaaaggtga gtatatcggc
     1621 aaaagttttg aggcgtatct taaacttgcc tttgtaaaag cagatgtttg ccttatgact
     1681 acaccgggtc ttgatgtttt tcaactcaaa cgctcaaaat atgtaaaata ctattgccat
     1741 atctttcatg cagtgacatc ttctcttgta tatagactgt tttctcttga ctattatgac
     1801 gcagtgcttt gcgatgcaga gtttcaaatc cctatgataa gagaaattga aagcaaacgg
     1861 aaacttaaac ccaaagagct tgttgtgaca ggttgcacct atatggattt gctggcaaaa
     1921 agggcagaat caatcagtaa aaataatgac gattttaaga ttcttgttgc gccgagctgg
     1981 ggtgaaaacg ggatattaaa aaaatatgga tcaaatctac tggatttact tgcagagtct
     2041 gattggaata ttgttatacg cccacatcca cagtcgttga ttgttgaaaa agatattata
     2101 caaaacctta aaaacagata caaagataaa caaaatataa gctggaattt tgatgttgac
     2161 aatctcaata tattatccca ggcggatgtt ttgataagcg atttttccgg tattattttt
     2221 gattatgcat ttttgttcaa cagaccattt gtctacgtaa atcaggaaat gaacagagaa
     2281 atatatgaca tgagtgatct tgatgaagaa ccctggagat acaaagcaat aagagaaatt
     2341 ggcactgaac ttacaaaaga caattttaaa aatattgttt ctataataaa gaacatgtca
     2401 aataaccaac aagtttttga tgcaatacaa aaagcaaaga atattgcctg gcaaaaacag
     2461 ggcgaaagcg ctaaaaatgt agctgatttc ttgattaaaa aacagaagga gctttcataa
     2521 tgctgaatat tttatttcag ataataatat atccgctcta tgcaggcttg gaaacaatat
     2581 tctccttttt ctttgatttt ttctgctgca atatttgcct gacaatattt gttattagtt
     2641 ttttgattaa tctaatatgt ctgcctttgt atattaatgc agaaaagctc caaaaacagg
     2701 aacgagacat ccaaaacaag atgtcaaaac gtgttgagtg tataaaaaag aattttaaag
     2761 gtgacgaaag acatatgctt ttggcgactt attatcgcca gaataattat cacccgataa
     2821 tgtcactgag gaccagcttg agtttattat tgcaaattcc gttttttacg gcggcttatt
     2881 tcttttttag ccatttgcag ctgttgcacg ggctgtctat gggtattatc gaggacttgt
     2941 caaagccgga taatctcttg catatcgnng gctctatcag tgtaaatgtg ctccctatct
     3001 ttatgaccgt gataaatctt gttgccggtg ctatttattc gagggaacaa tcaaaaaaag
     3061 ataaaataca aatcttgact ttagctttgg tttttcttgc aatattgtac aattctcctt
     3121 ccgggcttgt tttatattgg acgtttaaca atttcttttc attgataaaa aatatcggac
     3181 tcannctcaa atcagctaaa ccaaaagctt ttcttaagac cttgctttta ttttctgcag
     3241 gggtgttttt gttttatatg tttaaggtgt atgactactg tttgagcgta ttgttcgcat
     3301 tttttgcttt tatc
//
LOCUS       DABS01000210           10386 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_2798, whole genome shotgun sequence.
ACCESSION   DABS01000210 DABS01000000
VERSION     DABS01000210.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10386)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10386)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10386
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..243)
                     /locus_tag="CPT85_09580"
     CDS             complement(<1..243)
                     /locus_tag="CPT85_09580"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20579.1"
                     /translation="MEDFIKSVCVEDINHAQSTMFSLFKTLETASLGSLTAKAEMIHN
                     TFLLNKSYEFIAQNLSLLAVLKYKADKSNYKISLNML"
     gene            329..1021
                     /locus_tag="CPT85_09585"
     CDS             329..1021
                     /locus_tag="CPT85_09585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008474834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="DAB20580.1"
                     /translation="MNKVSIIVPVFNEINTLDTILEKIENAPFCALEKEIILVDDMST
                     DGTREHLKELESKYKVFYHDKNQGKGAAIRTGLAHITGDIMVIQDADLEYDPADYQDL
                     VKLIVEDKADVVYGSRLTGAKPSRSFMFTHLLGNKLLTFTTNVLYGATLTDMETCYKA
                     FRTSFLEGIQIKSDRFDFEPEITAKILKKKARLYELPISYYGREYNEGKKITWKDGIH
                     AIIALIRFRFSD"
     gene            complement(1011..1712)
                     /locus_tag="CPT85_09590"
     CDS             complement(1011..1712)
                     /locus_tag="CPT85_09590"
                     /inference="COORDINATES: protein motif:HMM:PF13490.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20581.1"
                     /translation="MANTAVCKKVSSMLSLYIDNKVSYQERAFIEDHLSNCEECYKKY
                     IYLKSLIKNLKDSYKQVLELAQKKQKQATFSIREHEKFVENLSPYVDNELNAQECFEF
                     RKYLMKSKAAQKELKNTYIMQKELRNAFDKAKKKRNADLTRNVMNSLKEQDHKWYQLN
                     HHSEILNSIFTMKTAKIAILAGLVMLGAYEYKEISLHEKTEEQHVYVEKQNTNIPKDV
                     YSKENSIELFNKFNH"
     gene            complement(1734..2396)
                     /locus_tag="CPT85_09595"
     CDS             complement(1734..2396)
                     /locus_tag="CPT85_09595"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="DAB20582.1"
                     /translation="MPSFILYLIQNIQRGRELILFGKKQYKSKSLEELIHLAQQDDLD
                     AVEEIVKRNQENIYASFYYLSNNCEDILDLTQEALLKMXMARNIKKLKDATKFKAWLN
                     QIVTRLFYDYIRSKNRKLKTVPIDKKDDEEQDRFNVADVPCKECTPEQSSLNSELNCI
                     IERSIHKLPDSFRLAIVLREFQGLSYEEIAEITNTNVGTVKSRIARARNKLQEELKAY
                     IA"
     assembly_gap    2148..2149
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(2448..3440)
                     /locus_tag="CPT85_09600"
                     /pseudo
     CDS             complement(2448..3440)
                     /locus_tag="CPT85_09600"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    3356..3366
                     /estimated_length=11
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    3574..3575
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3578..3904
                     /locus_tag="CPT85_09605"
     CDS             3578..3904
                     /locus_tag="CPT85_09605"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20583.1"
                     /translation="MPKENCTVTVTEFAIYPPPFMTFSTPAKKSFRMRFNRFIDELKH
                     FDLKAVKENLLFNPVGKKTEVAKSQKDXNLSSQSQKALAIYSVIDSAQKDVEEIKNIM
                     IRRFER"
     assembly_gap    3792..3793
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3999..5018
                     /locus_tag="CPT85_09610"
     CDS             3999..5018
                     /locus_tag="CPT85_09610"
                     /inference="COORDINATES: protein motif:HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20584.1"
                     /translation="MHRKCYVISLISNSNIYNQPSFGAKLSVVLSSNPLKMKADEFLK
                     NGNFDKAIEYYKAVLAQSPDDSELNLSLAKTYTYNNQYKQAIPHLENYLKARPDDIEN
                     ITLLGECCKKSGMFSKSIEHFNKALAIEPSYDYARRNLLDAQNLQLACYDPQKAKQER
                     YNTAIKNLTEAVKIAKQNLPKGYTDNMKDIVVSFDKTSKMGGRANIAQYEHSKRKVSV
                     TDEYTYADPQLTGAYVIHEFVHGKDNDPYTSIREEQDAYRVQAKYWVDNVKNIYDPEM
                     DYVADLYKQSAKALDDRVAEIYRLRDPGIPETSYNHPPTKGKAAAFSLSSSAGKPLKA
                     YEIIV"
     gene            5185..6843
                     /locus_tag="CPT85_09615"
                     /pseudo
     CDS             5185..6843
                     /locus_tag="CPT85_09615"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    6652..6668
                     /estimated_length=17
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6976..8673
                     /locus_tag="CPT85_09620"
     CDS             6976..8673
                     /locus_tag="CPT85_09620"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20585.1"
                     /translation="MVQGVGPTGNNSGSMSDIYLYNMYKNEWETYRKNHPESSMSFED
                     YLQMKGYLNYFNQQVENYVETGSTLQGDGQSGNTLSTSRMVANQTSSIYQGEDEETYY
                     EFDYDSGTYRKIEGKEDVAKALGLSSEQNVDTIVFGYDSVAITDYTFGNLDDGQDSSS
                     YRVNGKYSNVTLTNQEFDIHYILNALLMDPTDPQYQIAKGVFDDLCAHASQWLPDTDM
                     DELDAVAAEYGTNSAEYKAKLQEILLKNLDQAQEWVEEHTHVKNTSASGSLIENDTTT
                     DGTGGTDGTDGSENTTGTIPDYDKSSVLNSAGLLADYTNNTIWQSEKVNRSGKSQEEC
                     RSQALAKSSAYAESVLSQVESTLIAQLGDQCTEEIQKYIAKAKQTALENKSWQSTEWH
                     SAMLNKNKGFTSTCEVRTLVDIFFNEFNTLCQNKGKTNAEVEAEKKAAEEKAAREKSA
                     YQSIYNTDYQSLASEVGANKDIQVVNASSAAEIQSKAESEILNPIKNKIIAQYAGTIT
                     ASDLQNMLDNAATAALSDCTEWASTTNNYVYTIDSSLLISKFQENVKTIIQNKGYLA"
     gene            8761..8964
                     /locus_tag="CPT85_09625"
     CDS             8761..8964
                     /locus_tag="CPT85_09625"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20586.1"
                     /translation="MTDAISSINSQMASQTASIQMACMGLSQQKQQGAIALQLLQGAI
                     SAMPQDPSTITAAQLQSPIDIRV"
     gene            9104..9412
                     /locus_tag="CPT85_09630"
     CDS             9104..9412
                     /locus_tag="CPT85_09630"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20587.1"
                     /translation="MILNYATSKDSAVDLSMDAWIAKLGEGKKSTQQLQTELLESTTD
                     SIDEMKQKLAERLKEASKEESTDGTASANTDETTVTDDIKDPSEVTAEDLQSPIDIKL
                     "
     gene            complement(9402..9998)
                     /locus_tag="CPT85_09635"
     CDS             complement(9402..9998)
                     /locus_tag="CPT85_09635"
                     /inference="COORDINATES: protein motif:HMM:PF00899.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20588.1"
                     /translation="MINQSHASVLDINGEEHEKLLKSKILIAKNIAENYTLADNVRKK
                     LIAIGLKESNIENLNTIDDYFEKVNDYDIIIDCLQDIKSKFILNNLSIKYTKPLIYAN
                     LINTYAQITTIVPKETPCLKCLFPELDFDSYKDFCTPKQPFAINQIADIEVKEAINLL
                     LNKETGLKNNLLTFNANDMKFRNIKLSKNYHCKICSTI"
     gene            10101..>10386
                     /locus_tag="CPT85_09640"
     CDS             10101..>10386
                     /locus_tag="CPT85_09640"
                     /inference="COORDINATES: protein motif:HMM:PF03167.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="DAB20589.1"
                     /translation="MSEVLSLKNSEELLEKTRQKCAESQKCPLGQTRTKSVFSSGAIN
                     NKLMLIGEAPGYWEDQKGEPFVGKAGQLLDKIFASVGLSRQNDVYICNTLK"
BASE COUNT         3483 a         1793 c         1850 g         3226 t
ORIGIN      
        1 gagcatattc aatgaaattt tataattact tttgtctgct ttgtatttta aaacagctaa
       61 caaagataga ttttgagcaa taaactcata agatttgtta agcaaaaatg tattatgaat
      121 catttctgct tttgcagtca aacttccaag gcttgctgtt tcaagtgtct taaagagcga
      181 aaacatagta ctttgtgcgt ggttaatatc ttcaacacaa actgacttta taaaatcttc
      241 catataaaac ccttaacata atctttattt aattatacaa tattttttat aaatgataaa
      301 taacaatgga caaatatcgg ggatttatat gaataaagtt agtattattg tacctgtttt
      361 taatgaaata aatacgctgg atacaattct ggaaaaaata gaaaatgcac cattctgcgc
      421 cttggaaaaa gaaattatac ttgtagatga tatgtcaact gatggcacaa gagaacatct
      481 caaagagctt gagagcaaat ataaagtgtt ttatcacgac aaaaaccagg gaaaaggtgc
      541 agccatcaga acaggcctgg ctcacataac aggagacatc atggttattc aggatgcgga
      601 tcttgagtat gaccctgctg attatcaaga tttagtgaag cttattgtgg aagacaaagc
      661 tgatgttgtt tacggctcaa ggcttaccgg cgccaaacct tcaaggtcat ttatgtttac
      721 ccatcttctt ggcaacaagc ttttgacatt taccacaaat gtcctatacg gtgctactct
      781 tactgatatg gaaacctgct ataaagcttt tagaacaagt tttcttgaag gtattcaaat
      841 caaatccgac agatttgatt ttgaacctga aatcacagct aagatattaa agaaaaaagc
      901 aagactctat gagcttccta tttcgtatta tggaagagaa tacaatgaag gcaaaaaaat
      961 cacctggaaa gatggtatcc acgctatcat tgcactgatt cgcttcagat ttagtgatta
     1021 aatttgttga acaattcaat gctgttttct tttgaatata catctttggg tatatttgta
     1081 ttttgctttt caacataaac gtgctgttct tctgtttttt cgtgcaggct tatttcctta
     1141 tactcatatg ctcccagcat gacaagccct gcaagtattg cgattttggc tgttttcatt
     1201 gtgaaaatac tgtttagtat ctcactgtga tgattgagtt gataccattt gtggtcttgt
     1261 tccttaagtg agttcatgac gtttctagtt aaatcagcgt ttcttttttt ctttgcttta
     1321 tcaaatgcat tacgcagctc tttttgcata atataagtgt tttttagctc tttttgcgct
     1381 gcttttgatt tcattaaata ttttctgaat tcaaaacact cctgtgcatt gagctcgtta
     1441 tccacataag gagaaagatt ctccacaaat ttttcatgtt ctcttatgct gaaagtggcc
     1501 tgtttttgtt ttttttgtgc cagctcaaga acctgtttat aagaatcttt taagtttttt
     1561 atcagagatt ttaaatatat gtattttttg tagcattctt cacaattgga gaggtggtct
     1621 tctataaaag ctctttcctg atacgagact ttattgtcta tgtacaaaga caacattgat
     1681 gatacttttt tgcaaaccgc tgtgttggcc atttttccct cgatttctgt tatttatgca
     1741 atgtaagctt ttaattcttc ctgaagcttg tttcttgccc ttgcaatacg tgatttaact
     1801 gtgcctacat ttgtattggt aatttctgca atttcttcat aacttaagcc ctgaaactct
     1861 cttagtacta ttgcaagacg gaaagaatcc ggaagtttgt gtatagaacg ttctattatg
     1921 cagttaagct cactgttcag gcttgactgt tcaggtgtgc attctttgca tggcacatct
     1981 gcaacattga atctgtcttg ttcttcatcg tcttttttgt ctatagggac tgttttcagt
     2041 tttctgtttt tgcttcttat gtagtcataa aaaagccttg ttactatctg gtttaaccag
     2101 gctttgaatt ttgttgcatc ttttagtttt tttatattgc gagccatnnt cattttgagc
     2161 agtgcttctt gtgtaagatc aagtatgtct tcacagttat tgctcagata ataaaaagag
     2221 gcatagatat tttcctgatt tcttttgaca atttcttcta cagcatcaag gtcatcttgc
     2281 tgtgcaagat gtataagctc ttcaagactt tttgacttat attgcttttt gccgaaaagt
     2341 atcaactctc ttcccctttg tatattttgt attaagtaca aaataaaaga aggcagagtt
     2401 ttttcacacg ctctttttta tataaacatg tcgataatat ttttttatca aatatttaaa
     2461 acgtataaat ccttatccag tttaatttca aaataagtat taagcggaat atcgacatca
     2521 ttgccttttc tcgtaactgc aacaaatggt gataacatca gatctgctat ttgaagtgct
     2581 gcagcgccta aaaatgccag aggttttgta taagtgtttg ttgtacacgt gttgcctccg
     2641 caagggtctt ttaaagacga atggataacc ccgctatttg cagcatctgc cagatttgca
     2701 agataacaag gcgaaccagc caatgtgtta aagtatacct ttttgttgtc tattttagat
     2761 atgagcgctg ttacagggta tgtaatggag tcaacggtta ttttttcaag tgcaatcttt
     2821 accgtgccgc ttttacccat cattcttggc ttgtgtgttt tttctatttt ccctttaaac
     2881 actatttttg agggtttttt atcgtatgta agatattctt tttgtacgga ttcaaatctc
     2941 acaggaatac cttcaacatt gccgttgttc aaattctgct cggaaacaac aataaacttt
     3001 cttccttttt caagctttac tgtctcaaat tccatgtctg gaagtataga attggcacct
     3061 gattctatgt tttttgcttt ttccgaaatc tcctcctgcg gcatcgggtg gtgaataaat
     3121 gctgtctgag ttttatctat ttccttgact ttgtaagtta tttgctcagc ttccgcaact
     3181 gtcagttgtg aaaataaaga tgccaataaa agcagcagaa taataatacg tttcatgcta
     3241 aaaaaaacct caaatactct tatttttact ttaaaattct gaacccttgt ctgttgggat
     3301 ttatattcta acctcaaaaa tcttgaaata tatcctatgt ttattgtatt tacaannnnn
     3361 nnnnnngttt ttttgatatt aattgtatgt tttacaccat attgcccaat cgggtaatgg
     3421 acataaatta tttgtgtcat aagattgaat catagaaaag agcatgtact gcaaatgcag
     3481 tcacagccaa gtttctgctc ccctaattcc tcatggatag aaattgaata ttaaataaca
     3541 aacattgtac ttattaaatt aggagaaaaa ttannttatg cctaaagaaa attgtactgt
     3601 tacggttact gaatttgcaa tctacccgcc tccgtttatg actttttcaa ctcccgctaa
     3661 aaagtctttt cgcatgagat tcaacagatt tattgatgag ctcaaacatt ttgaccttaa
     3721 agctgttaaa gaaaatttgt tattcaaccc tgttggcaaa aagaccgaag tcgctaaatc
     3781 tcaaaaagat tnnaatttaa gcagtcaaag tcaaaaagca cttgctattt attcggttat
     3841 tgattccgca caaaaagacg tagaagaaat caaaaatata atgataagac gttttgaaag
     3901 ataaacttgc tttcaatgta tatttttata aaaactttta acaaacatgg caaattttaa
     3961 acacgtttcg ttttaaaata aaaaagattt tgtgaaatat acatcggaag tgttacgtga
     4021 tttctttaat atctaacagc aatatatata atcaaccttc tttcggcgcc aaactcagcg
     4081 ttgttttatc ttccaaccct ttaaaaatga aggctgatga atttttaaaa aacggtaatt
     4141 ttgataaagc aattgaatac tacaaagctg ttttggctca atctccggat gattcggagt
     4201 taaatctcag tctcgcaaaa acttatacat ataacaatca gtataaacag gctataccac
     4261 atcttgaaaa ctatcttaaa gcccgtccgg atgacataga aaatattaca ctgctgggtg
     4321 agtgctgcaa aaagtcaggc atgttttcaa aatcgattga gcattttaac aaagccctgg
     4381 caatagagcc aagttatgac tatgcacgca gaaatttgct tgatgcacaa aaccttcaac
     4441 ttgcctgtta tgaccctcaa aaagcaaaac aggaacgata taatacagct attaaaaatc
     4501 ttaccgaagc tgtaaaaatt gcaaaacaaa atttaccaaa aggctatacc gataatatga
     4561 aagatattgt tgtatctttt gacaaaacat ctaaaatggg cggtcgagct aatattgcac
     4621 agtatgagca tagcaaaaga aaagtgtctg tgactgatga atacacctat gctgatcctc
     4681 aattgacagg ggcatatgta atccatgagt ttgtgcacgg caaagataat gacccttata
     4741 cctcaattag agaagaacaa gatgcctaca gggtgcaggc aaaatactgg gttgataatg
     4801 taaaaaacat ttatgaccct gaaatggact atgttgcaga cctttataag cagtcagcca
     4861 aagctcttga tgacagggtt gcagaaatct acagacttag agatcccgga atacctgaaa
     4921 cttcctacaa tcatccgcct acaaaaggaa aggctgctgc attttcgctt tcttcatcag
     4981 ctggaaagcc tttgaaagct tatgaaataa ttgtgtagga atgtaaataa gtgtaacgat
     5041 ttcactcatt tttgcaccat gttcatgcaa aaataattct tgagaatact tatatcaccg
     5101 aaacagaata aatagattag tatgagtctt acccctatat caaaaaccga atacggatca
     5161 tatcttagaa acagcacttc atcaatgagg aagtttgtca caaaactgga cagaaaaggt
     5221 gccatactac ctgttttgtt gttggaagct actgttacag ggggcagaac ctatcaggct
     5281 tataaaagag acggctttgt agaagccaga gaacgcgtga cagaagaatc tttaggggct
     5341 gtgttctggc tgttcggtgc tacaatggcg ggtaaacttt ttgataagct tggccaaaaa
     5401 ttcttaagca tacctgaaaa tatgcctgat gttggcgtgg attcagcacg ttcgccattt
     5461 aaaaactata ttgccaaaat ggcaggtaaa atcaaacact cgccagaata tcttgcaaat
     5521 tttgctgttg gaaaaaccat tgccagcatt attacggcat gtttgtttat cggttatgtt
     5581 gtgccaaaag ttaatcaggg cataacaaaa catatctttg gcaaaatgaa caaaaaagat
     5641 ccgaaccatg aaaaagcacc ggatccttat aaaaacaaat taacacttaa agatgcaaga
     5701 gctatttttt ctgcaaaagg tatttctata aatgctgtag aaaactttaa aggtcagcat
     5761 aaaaatacaa ctcaatcagg caatgtctcc cagccttcat tcaaaggtaa cgcagatgca
     5821 atgcttcgca ttgtccaaaa ctttgaagaa aatgacgtgt ggaaactgct cggtacagat
     5881 gttggtactg tttccggcag aacaatcaac gcaagaaaca atgatgaacg tgtcgagatt
     5941 gtttttagag atgttgcatc aattccgttc tattgcttta caatgcctgc aattgttgca
     6001 tttatgaaca aaaaagacac attcaaaggc ttgaatacaa aactcaaccc gatgagtgcg
     6061 atggaagtac acaataatat ggttgaaaaa atggctgctg ccggatataa agaaatgtct
     6121 gtagaacagt tcagaaaact tgcactgggc gatgacaaaa actttaataa gctgtatgaa
     6181 aaaatcttcc cgaaacaggc agaagctgaa cctaaaaaat tgtttggaat tttcaaccgt
     6241 aaaccggaaa aagtttacag aacaattact ttggaagaat tcaataacat cataaacaca
     6301 aacgcaaaag atctggaaaa tcctgattta atcaaagagc ttgctcaaaa aatgtccgga
     6361 ctccaaagtg aaaaacttaa cccgaaaaca aaagcgtttg aaaaaattct cacagaatct
     6421 caagtagaag atgtcttaaa aggcggatgg gccagagatc ctgaatttat gaaaaatgta
     6481 ttgaacaata tatttgaaga caaattgatt gacataaata atccaaaatc tgttgctaaa
     6541 aagacaaatc ctttaagcaa tccttacaaa tatatttcta tgaatgatat tgaagcaaac
     6601 agagcaaaag tactgggtta tgtagaagcc attgcaaaag atgcagaaag tnnnnnnnnn
     6661 nnnnnnnngc taaaaatgaa taaacgaaac atgaacaaaa acggaatctt tatggctctg
     6721 gcaatgggtg tttccgcatt gttcctttct acaatcattc caaaaataca gtactatatc
     6781 actttcttaa gaacaggtaa aaactcattc ccgggtacgg aaaatcttga gcaaaaaaaa
     6841 taaacaacaa ttgtaaacat ttattacaaa cagacttgag atattaaagt ttataccctt
     6901 ttgtaccgat attactcatg aagattcatt ggagtcttgc agggaaagtc aataattaga
     6961 aagtgcagga gcagcatggt acaaggcgta ggaccaacag gtaataactc ggggtcaatg
     7021 agtgatatct acctttacaa tatgtacaaa aacgagtggg aaacatacag aaaaaaccac
     7081 ccggaatcat ctatgtcgtt tgaagattat ctgcaaatga agggatacct caattacttc
     7141 aatcagcagg tagaaaacta cgtggaaaca ggttctacac ttcaaggtga cggccagagc
     7201 ggaaacaccc tgagcaccag tagaatggtt gcaaatcaaa caagctctat ttatcagggt
     7261 gaagacgaag aaacctatta cgaatttgat tatgacagcg gcacttaccg caaaatagaa
     7321 ggcaaagaag acgttgcaaa ggctcttggc ttgtcctccg agcagaatgt ggacacaatt
     7381 gtctttggct atgattctgt tgcaattaca gactatacat tcggtaacct tgatgatgga
     7441 caggattctt catcatatag ggtaaacgga aaatattcaa atgttactct gacaaatcaa
     7501 gaatttgata tacattatat tctcaatgct ttgttgatgg atcctactga tcctcaatac
     7561 caaatagcaa aaggcgtttt tgatgacctg tgtgcacatg ccagccaatg gcttcctgat
     7621 acagatatgg atgaattgga tgcggtagca gcagagtatg gtacaaattc agcagaatat
     7681 aaagccaaat tgcaagaaat actgctaaaa aatcttgatc aggctcagga gtgggttgaa
     7741 gagcatacgc acgttaaaaa cacaagcgca tcaggctctt tgatagaaaa tgatacaaca
     7801 accgacggca caggcggaac cgatggtaca gatggatctg aaaacaccac tggaacgatt
     7861 cctgattatg ataaaagttc tgtattgaat agtgctggtt tgttagctga ttataccaac
     7921 aatactattt ggcaaagtga aaaagttaac agatcaggta aatcacagga agaatgccgt
     7981 agccaggctt tagcaaaaag ttcagcatat gctgaaagtg tattgtcaca ggttgaaagt
     8041 acattaatag ctcagcttgg tgatcaatgt actgaagaaa ttcaaaaata tattgcaaaa
     8101 gctaagcaaa cggctttaga aaataagagc tggcaatcta cagaatggca cagtgcaatg
     8161 ttaaataaaa ataaaggttt tacatcaact tgtgaagtca gaactcttgt tgatatcttc
     8221 ttcaatgaat tcaacaccct atgccaaaac aaaggtaaaa caaatgctga agttgaagca
     8281 gagaagaaag ctgcagaaga aaaagctgca cgtgaaaaat cagcttatca atcaatatac
     8341 aacaccgact atcaatcact tgcatcagag gttggagcaa ataaagatat acaggttgta
     8401 aatgcttcat cagcggcaga aatacagtca aaagcagaat ctgaaatact taatcctatt
     8461 aaaaataaaa ttatagctca atatgccggt acaataactg cttctgacct gcaaaacatg
     8521 ctggataatg cagcaacagc agctttgtca gattgtacag aatgggcaag cacaacaaac
     8581 aactatgttt atactattga ttcaagcctg cttatttcaa aattccagga aaatgtgaaa
     8641 accattatac aaaataaggg ctatctggcc tagttatatt tcttcatcta caccttttgt
     8701 atagttttaa agtggttgta tagtggtata ataactatat agccaataaa ggaatgtgaa
     8761 atgacagacg caatcagttc tataaactca caaatggcaa gccagacagc cagcatacaa
     8821 atggcatgca tgggactgtc gcagcaaaaa cagcaaggcg caattgcttt gcaattattg
     8881 caaggagcaa tcagcgcaat gccgcaagac ccttcaacta ttactgcggc acagcttcaa
     8941 tcccccattg atatccgagt ttaaaaatta aaaaagcaag ccgccttttc cttttggagg
     9001 cggctttgtt tatgatttta ccaatttaca atattagatg gatttattgt tttttcataa
     9061 ggctataatt taggtattaa gaaagagaaa aggaagtgat tttatgatac ttaattatgc
     9121 aacttctaaa gattcagccg ttgatttgag catggacgcg tggatagcca agcttggtga
     9181 aggcaaaaaa agtacacagc aattacaaac agaattgctc gaaagtacaa cagattctat
     9241 tgatgaaatg aaacaaaaat tggcagaaag actcaaggaa gcttcaaaag aagaatctac
     9301 agatggtact gcttctgcaa atacagacga aactactgta actgacgata tcaaagaccc
     9361 atcagaagtg acagcagaag atcttcaatc tcctatagat attaaattgt agaacaaatt
     9421 ttgcaatgat aattttttga aagctttata tttctaaact tcatatcatt tgcattaaat
     9481 gtcaaaagat tattttttaa acctgtttct ttattaagga gcaggtttat tgcttctttt
     9541 acctcaatgt cagctatttg gtttattgca aaaggctgct ttggtgtaca aaaatctttg
     9601 tagctgtcaa aatccagttc cggaaaaaga cactttaaac aaggagtttc tttaggaaca
     9661 attgtggtaa tttgagcata tgtgtttatt aaatttgcat atatcaatgg ttttgtatat
     9721 ttgatagaaa ggttgtttaa tataaatttc gacttgatgt cttgcagaca atcgataatt
     9781 atgtcgtaat cattaacttt ttcaaaataa tcgtcgattg tgttaaggtt ttcaatattg
     9841 gattctttta gccctatggc gataagtttt tttctcacat tgtctgccaa tgtatagttt
     9901 tccgctatat tttttgcaat cagaatttta gattttaaca gtttttcatg ctcctcacca
     9961 tttatatcta aaactgatgc atgactttga tttatcatac tatccctctt aatcccgtat
    10021 tttgtaaaat caaattcgca ttttattcaa atcattaaaa gattatagta caattaattt
    10081 gtctgaggaa ggatgttaag atgagtgaag ttttaagttt aaaaaattct gaagaattgc
    10141 tggaaaaaac aagacaaaaa tgcgcagaat ctcaaaaatg tccactgggg caaactcgca
    10201 ccaaatctgt gttttcgtcc ggtgcgataa acaacaaact tatgctaatc ggtgaggcgc
    10261 cgggatattg ggaggatcaa aaaggagaac cctttgttgg caaggccgga caactgttgg
    10321 ataaaatttt tgcttcggtc ggattatcaa gacaaaatga tgtttacatt tgtaacactt
    10381 taaaat
//
LOCUS       DABS01000211            5345 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_15305, whole genome shotgun sequence.
ACCESSION   DABS01000211 DABS01000000
VERSION     DABS01000211.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 5345)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 5345)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5345
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..243
                     /locus_tag="CPT85_09645"
     CDS             <1..243
                     /locus_tag="CPT85_09645"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20566.1"
                     /translation="GMLGLTLLTMSMLIASQSDFLISILKASLIKVFLLFYYSTIEQL
                     FNYVKFINKLSALGLTIERLFNYTTNIQLNNYSIMR"
     assembly_gap    381..389
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            470..2041
                     /gene="cadA"
                     /locus_tag="CPT85_09650"
                     /pseudo
     CDS             470..2041
                     /gene="cadA"
                     /locus_tag="CPT85_09650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020816490.1"
                     /note="frameshifted; incomplete; missing stop; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cadmium-translocating P-type ATPase"
     assembly_gap    1172..1173
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2042..2061
                     /estimated_length=20
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2126..2638
                     /locus_tag="CPT85_09655"
                     /pseudo
     CDS             2126..2638
                     /locus_tag="CPT85_09655"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    2592..2607
                     /estimated_length=16
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2784..2785
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2803..3537
                     /locus_tag="CPT85_09660"
     CDS             2803..3537
                     /locus_tag="CPT85_09660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017068419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="DAB20567.1"
                     /translation="MKRVLITGASSGIGKAASTLFLERGWQVIMVDKVEDEQLNADLK
                     KQYKDNVYFYLGDISQNDTVMLLYDFVLEKTAGVDSLINNAGIIQHGYLHSADEYEWD
                     EIFNTDVKSIYLTTKYFVPDMIKRGSGTIVNTASISGLLGDFKMPIYNAAKGAVVNLT
                     RAMALDYAEFGIRVNSICPSAIRTPLIKGPLEPHIEVNPMKRIGEPIEAAKAIYFLAS
                     DESSFINGTNLPVTGGLEAHTGQPRK"
     gene            complement(3565..4020)
                     /locus_tag="CPT85_09665"
     CDS             complement(3565..4020)
                     /locus_tag="CPT85_09665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005976370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20568.1"
                     /translation="MSIQSIGTNQFFTKKNVINTNKKVVSFSASDRPNTRQFNELRVF
                     YHHIYEYKKGLRNLVLTTEKAANKEIIENRLKKENIPYVINEVNGKNINVFFGNKDCI
                     KVVSTFDNRLYKLTPEQDFMLGTMLGYDKIQQCQRYFDMKEKYIKNQRI"
     gene            4278..4955
                     /locus_tag="CPT85_09670"
     CDS             4278..4955
                     /locus_tag="CPT85_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011032764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="DAB20570.1"
                     /translation="MPLLGEKAPSFHAKSTKGFIHFPRDYKGSWTVFFSHPADFTPVC
                     TTEFMTFEAMKDEFLQINTKLLGLSVDSLSSHLAWLKDIKDNIDYNGMNEVDVDFPVI
                     DDLNGHIARKYGMIQPKADDTKTVRAVFIIDPQSIIRAILYYPQSTGRNLDEIKRIIV
                     ALQTTDEFNVVTPCNWEAGDEVIIPPPANKEEAIERLESMDSVKCYDWFLCFKKLPKQ
                     DIAXCNN"
     assembly_gap    4941..4943
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            4969..5301
                     /gene="trxA"
                     /locus_tag="CPT85_09675"
     CDS             4969..5301
                     /gene="trxA"
                     /locus_tag="CPT85_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003512626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="DAB20569.1"
                     /translation="MMSNVKEFTDENFDIELKNTTDPVIVDFFAPWCGHCRTQGPIID
                     KLADELDGKAVVAKLNVDENREKAAEFFISGIPAILVFKNGKLVEQKAGVQQLEELKK
                     LVSKHENN"
BASE COUNT         1760 a          828 c         1020 g         1685 t
ORIGIN      
        1 ggcatgttag gtttaacttt attgactatg tctatgttaa ttgcttcaca atcggatttt
       61 ttaatttcca ttttaaaagc ctctttaatt aaagtttttt tattgtttta ttatagcaca
      121 attgaacaat tattcaatta tgttaagttt ataaacaaat tgtctgcttt agggttgaca
      181 attgaacggt tgttcaatta tactacaaat atacagttga acaattattc aattatgagg
      241 taataaatat gtgcgataac catcatgaac acggccattg ccacagccat gaaacggccc
      301 tgattgacgt cagaataaga gttttagcgg ctattacagt ttttgtttta ggtttattaa
      361 ttgatttatc aagttacgca nnnnnnnnna tattattgca ggtggggatg tgctctttaa
      421 ggctctcaaa aatattttta gaggaaaagt gtttgacgaa aattttttga tgggtattgc
      481 cacaatcggt gcgtttgcaa ttagagaata tccggaagct gttatggtaa tgattttgta
      541 tcaaattgga gaatatctac aagacaaggc tgttgaaaaa tctaaagatt ctattactca
      601 gttgatggat atcaggcctg attatgccaa tattgaagca gacggaaaaa tcatccaaaa
      661 aacaccttcg agcattaata taggtgatac aatagttgtg agaacaggag aaaaaatccc
      721 tctggacgga actgttatag atgggactgc ttttattgac acatctgctc ttacaggtga
      781 atctgttccc cgacaaatca ctatccatga caaagctata agtggctgca ttaatacaaa
      841 tggggttatt aaaattcgtg tagaaaaagc atttggcgag tctacagttt caaaaattct
      901 tgagcttgtt gaacacgcaa gctccaaaaa ggccaaagca gagaatttta ttacaaaatt
      961 tgcaagatac tacacaccgg ccgttgttat aggtgcagtt atgctggctt tagtgccccc
     1021 gtttcttttt ggcggtggtt ttgaaatctg gctatcaaga gctttgactt tccttgttat
     1081 ttcttgtcct tgtgctcttg taatttctgt gccgttaaca ttttttgccg gtattggcgg
     1141 tgcttctaaa aaaggtatac ttgtaaaagg annctctttc aaaaccatat gcagttgttt
     1201 ttgataaaac aggcactttg acaaaaggaa cattttctgt atccggggtt gttccttgta
     1261 acaacgtaac agaacaagag cttattgaat atacagcaat ggctgaaaat tactcaaatc
     1321 atcctattgc cgtttctcta aaacaatatt atgcaagaga aattgataca tctttaatta
     1381 aaaatgtgca agaaattgcc ggaaacggag taagcgcata cgtaaataat catcatattc
     1441 ttgcgggtaa tgctgctttg atggaaagat ttgatattgc atataaaaaa gtatgcgaag
     1501 aaggaacaac tgtttatgtt gcaaaggatg ttcaatatat aggttatata gttatttccg
     1561 atgaaataaa agatgattca aaagttgcaa tttgtgagct taatcctatt gttgagcaaa
     1621 catatttgtt aacaggagat actcaaaatg cgacagaagc agttgctaat aaattaggca
     1681 ttggaaaagc ctatacaggg cttttacctg tggataaagt agcaaaactc gaagaaataa
     1741 tgaaccatag gcaaagctct aagagtgtca tatttgttgg tgacggtatt aatgatgctc
     1801 cggttcttac acgtgcagat gttggcatag ctatgggagc acttggctct gatgctgcta
     1861 ttgaagctgc agatgttgtg attatggatg atcagccttc aaaaatcccg actgcaataa
     1921 aaatagcaca aaaaactatg gccattgtaa aacaaaatat agcttttgct ataggtgtaa
     1981 aaattgtttt tcttatactt ggtgcagcag gttttattac aatgtggggt gctgtatttg
     2041 cnnnnnnnnn nnnnnnnnnn nattgcgtgc attgcgtgtt taagccatct taagatatac
     2101 tatatcaata aggaggctga atgtgatgaa aaagattttt attttatttt tgagccttat
     2161 ggtctcttct ccggtttttg ccaaaagtac tgtaattgta caaagcttaa gtaatttttc
     2221 cagcatgaat ccacagtaca caatttctgt aaaagttgca aaaacacata agtttaaaag
     2281 cggttttact ttgcagcagg gcactgttat taattcaaag gttgttaaaa ttaccgaacc
     2341 aaaacgcggt aaaagaaacg tttatatagt tgtccagcct tctacactca caattccggc
     2401 caaaaaacaa aaacgtgctt ttaaaagtgt gcaccttatg gcaaaagtta caccccataa
     2461 aaaattaaac aaaaagcagg cagcacaaaa aggggcagta agtgcaacgg gaattgtaat
     2521 acctggattt tctcaagttt attatttttg caaaggttat aacaatcctg aaaaaggcaa
     2581 aaccagactt gnnnnnnnnn nnnnnnnctt gtatacgttg aaaagggcga tgagctaaaa
     2641 ataaaaaaag gcgattacct taaaatgaaa ttttatgatg aaaataagcc aaagtggaag
     2701 gtttttaaaa gcttgtagta ttgttcaata tcttgataca ctttttgggg attaatttat
     2761 agacaattcc tgttaaaact ctannaaaag aaaggatttt ttatgaaaag agttttgata
     2821 acaggagctt cctcaggcat aggtaaggct gccagcacgc tttttttaga aagaggttgg
     2881 caagtaataa tggttgataa agtagaagat gaacagctca atgctgattt gaaaaaacaa
     2941 tacaaagata acgtatactt ttatttgggc gatatttctc aaaatgatac agtgatgctt
     3001 ctttatgatt ttgtgctgga aaaaacagca ggagtagatt ctcttataaa taatgcaggt
     3061 attatccagc acggatatct ccacagcgca gatgaatatg agtgggatga gatttttaat
     3121 acagacgtaa aatcaatata tttaacaaca aaatattttg ttcctgacat gataaaaaga
     3181 ggcagcggta ctatagtaaa tacagcttca atttccggat tgctcggtga ttttaaaatg
     3241 ccgatttata acgcagcaaa gggcgctgta gttaatttga ccagagcaat ggcacttgat
     3301 tatgctgaat ttggtataag agttaacagc atttgtccca gcgcaattag gacacctctg
     3361 attaaaggcc cattagagcc tcatatcgag gtaaatccta tgaaaagaat aggagaaccg
     3421 atagaagcgg ctaaggctat atattttctt gcaagtgatg aatcaagctt tattaacggt
     3481 acaaacttgc ctgtcacagg cggactcgaa gcccacaccg gacagcctag aaaataaaca
     3541 acaagcggac ttttatagtc cgctttatat tctttgattt tttatatatt tttctttcat
     3601 atcaaaatat ctttggcact gttgtatttt atcgtatccg agcattgtgc caagcataaa
     3661 atcctgttcc ggtgtgagct tgtatagtct gttgtcaaat gtagaaacta ctttgataca
     3721 atctttattg ccaaaaaata cgtttatatt ttttccattt acttcgttaa tgacataggg
     3781 aatattttct ttttttagcc gattttcaat aatctcttta ttcgctgctt tttctgttgt
     3841 aagaaccaga tttcttaaac ctttcttata ttcgtaaata tggtgataaa atactcttaa
     3901 ttcgttgaat tgtctggtat tgggccggtc agatgcagaa aaactaacca cctttttgtt
     3961 tgtatttatt acgttttttt ttgtaaaaaa ttggtttgtt ccaatagatt gtatactcat
     4021 ataactccga tatttaactc ttatattata aatgtaagtc taggctaact ttttgtcaag
     4081 aaaaaattat attattatac aatgcctgat ttttaaatat tagattaaaa ggcaatgaaa
     4141 aaatattgtt gtcatacgaa tatatgctta tatcttttac aacagggaaa ggaatgcata
     4201 tgttaaaaaa acttttgctg cctgcattat tggctgcagc tgtttataaa attttgaatc
     4261 ataaaaagag aaacaatatg ccgttgttgg gagaaaaagc cccctctttt cacgcaaaaa
     4321 gtacgaaagg gtttatccat tttccacgtg attataaagg aagctggaca gtatttttct
     4381 ctcatccggc agactttaca ccggtttgta ctacggaatt tatgacgttt gaggcaatga
     4441 aagatgaatt tttgcaaatt aacacaaaac tgctggggct ttcagtagac agcctttcat
     4501 cgcatctggc atggctaaag gatattaaag acaatattga ttataacgga atgaatgaag
     4561 tagatgtgga ctttcctgtt attgatgatt tgaacggaca tattgcaaga aaatatggaa
     4621 tgattcagcc aaaagcggat gatacaaaaa cggttagagc tgtattcatt atagacccgc
     4681 aaagtataat aagggctatt ttgtattacc ctcaatctac cggtagaaat cttgatgaga
     4741 taaaacgcat aatcgttgca ttgcaaacaa ccgatgagtt taatgttgta actccgtgca
     4801 actgggaagc cggcgatgag gttattattc cccctccggc caataaggaa gaagccatag
     4861 aacgtcttga aagtatggat agtgtaaagt gttatgactg gtttttgtgt tttaaaaaac
     4921 tgccaaaaca agacatagca nnntgtaaca actagattta aggagataat gatgtctaat
     4981 gtaaaagaat ttactgatga gaattttgat attgaattaa aaaatacaac agaccctgtt
     5041 attgttgatt tttttgctcc gtggtgtggc cactgccgta cacagggccc tattatcgat
     5101 aaacttgccg atgaattaga cggtaaagcc gtagttgcca agctaaatgt cgatgaaaac
     5161 agagaaaaag cagccgagtt ttttatcagc ggaataccgg caatacttgt atttaaaaac
     5221 ggcaagcttg tggagcaaaa agcaggtgtc caacagcttg aagagcttaa aaaacttgtt
     5281 tcaaaacacg aaaataatta aatattcaaa ataaaagccg gttgcaaacc ggctttttgt
     5341 ttata
//
LOCUS       DABS01000212           12149 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_2885, whole genome shotgun sequence.
ACCESSION   DABS01000212 DABS01000000
VERSION     DABS01000212.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 12149)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 12149)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12149
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..395
                     /locus_tag="CPT85_09680"
     CDS             <1..395
                     /locus_tag="CPT85_09680"
                     /inference="COORDINATES: protein motif:HMM:PF13599.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20545.1"
                     /translation="LSDADLSGCCFSESTFTEVNFSNTDLTSADFSRANLVECNFSGA
                     LLNGTDYSYATASYCNFTDADMAGAVFNESNLENSDFSAAENMEAVRFDESTIWPDTD
                     LLPEDFDTTYTRDLSSLEDDDDHASADY"
     gene            complement(396..1064)
                     /locus_tag="CPT85_09685"
     CDS             complement(396..1064)
                     /locus_tag="CPT85_09685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019553655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="DAB20546.1"
                     /translation="MEKTKKILIVVTNTSDSGDLHKTGVWLEEFAVPYYAFQDEGYEV
                     TVASPLGGVAPIDENSLECKNPTEWDYTKKYLDNTKKLDEVDYKTYDAIFIPGGHGPM
                     FDLAQNELLGEIVSYFYNTHKPVAALCHGPAGLINAKTETNEPIVKGMRLTSFTNEEE
                     KIIKKDKMVPFLLESKLRQLGALFEDAAPWSEHVVVDENLITGQNPASAKLTAEHTIK
                     KLKL"
     gene            complement(1273..1869)
                     /locus_tag="CPT85_09690"
     CDS             complement(1273..1869)
                     /locus_tag="CPT85_09690"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20547.1"
                     /translation="MKTKGGSASTTYYTKDGIMEKRIENHYSSVREIDYINGSVKEIS
                     FNKNGEVSEISTYGRNQNDKDLFLKDGRIFKEVERLEDGTRKVSVKDTRHRKDKVVYS
                     SVQTPEMLAAHKRQMVNKARKTGSNVQSFTDGGMYVEHPTTTRSAAGQMLDKTVDNMK
                     DNIRTVTQYFGKGIKQEKVYDLSAGVNSPKLKKLTXRL"
     assembly_gap    1283..1284
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    2305..2311
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2656..3897
                     /locus_tag="CPT85_09695"
     CDS             2656..3897
                     /locus_tag="CPT85_09695"
                     /inference="COORDINATES: protein motif:HMM:PF01052.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20548.1"
                     /translation="MQLREEEETVTSEFSDQLKSTFNWFDTNFTKILEDTFCEFWNEN
                     ADVKLVCVSENTNILAEREEFFVTQIRLNKELSVFIRLSKNIVKNLLENILGPNGRNF
                     NIEKLTELEAKILTGFDDFLYKNFSHLIKSGDALPQNNTNYNEANLTFFLKTKTKTIG
                     KLVIKIPVVAVEPETTQLAEESFSITDFLNSTAEVKLNVGYTRIRLNELKHLEKDDIV
                     MLEHSKSNKMVLTYNNYSTEIKVVPNPAIMIDYDNFDDNGNNPKGDNTMTSPDIYNMW
                     DTIQVDIGAEFEKVKLTLGELKQISEGLVVDIGSVYDNRIDLKVEDKIVASGELIIIN
                     DRYGVKINQIFTEEKNQASDNAEYAQEHPQQQQIEEMLDEPEYTQQNEPETPPVQEDT
                     DTSVNEEDFDYSDFDVDDEDL"
     gene            3918..4376
                     /locus_tag="CPT85_09700"
     CDS             3918..4376
                     /locus_tag="CPT85_09700"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20549.1"
                     /translation="MGTYLINFLVYSMAMVGLLFVCLMVYKKTMVNNKCSKNKNELDI
                     ENALNLSPRKTIYIVKAGNEKFLIASDAERTTFLAKLDASGKTPAMQGYTPQMSTIEV
                     IKPEKKEEKGIDYSEIMNAIKSTQKRQPVMKEMLRKLEHSAMEESQQGKN"
     gene            4387..5028
                     /gene="fliP"
                     /locus_tag="CPT85_09705"
     CDS             4387..5028
                     /gene="fliP"
                     /locus_tag="CPT85_09705"
                     /inference="COORDINATES: protein motif:HMM:PRK12797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliP"
                     /protein_id="DAB20550.1"
                     /translation="MESVLKDLNPVLQMLLVMSVFSMLPFFFTCMTSFLRYAIVFSML
                     KQALGTQQVPPGMVLVGLSIILTIYTMSPVFTKMWDMGSVPYQKNGDIVAAMTEGSKP
                     LKEFMMKQTRQSDMTFFIQLSGAPKPKTPDDITIWQVAPAYIISELKTAFEIGFVIYV
                     PFIVLDLVVANVLLALGMFMLSPTIISLPFKLLIFIAVDGWSMIVHGLVTSFN"
     gene            5045..5539
                     /locus_tag="CPT85_09710"
     CDS             5045..5539
                     /locus_tag="CPT85_09710"
                     /inference="COORDINATES: protein motif:HMM:PF01313.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20551.1"
                     /translation="MEMLMEYMGKGLITMLMISMPCVLVAAGVGLVVGILQAVTQVQE
                     QTIAAAPKILAVFLVLMIMGMGYIKLLTNLLTEGFQLAFNQIPAADSFVLSSNYHKYT
                     RPFDAEFKQGAGRFDKQEIGDIMRNPGKIPFIDYNSKTKHYPSDRMPNPTPNLIERNA
                     IMNR"
     gene            5561..5911
                     /locus_tag="CPT85_09715"
     CDS             5561..5911
                     /locus_tag="CPT85_09715"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20552.1"
                     /translation="MKKFILLLTMVLFSQLFINANAKEPDKTINLHTDGAYILLLNTR
                     PIEMTISNPQIINAEVTTEIYSQDSQIVIKTLTEGIAYINYKLKNTPQTIKVLVDNNA
                     PVDKDVIEIDKVKG"
     gene            5920..6168
                     /locus_tag="CPT85_09720"
     CDS             5920..6168
                     /locus_tag="CPT85_09720"
                     /inference="COORDINATES: protein motif:HMM:PF01311.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20553.1"
                     /translation="MIDAVLQSFPKYFPEINNALGAGIFIFARVLGFVRFAPVLNRKE
                     IPGMIKISFALILTIILTMTVETGPAXRPPRGHLLFSA"
     assembly_gap    6130..6131
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6156..6371
                     /locus_tag="CPT85_09725"
     CDS             6156..6371
                     /locus_tag="CPT85_09725"
                     /inference="COORDINATES: protein motif:HMM:PF01311.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20554.1"
                     /translation="MLGIILNIAGGMMIGFIANCIVSAIAAAGDMINMQMGLSSAMVL
                     DPTAGAQVSILGNFFGLXXMLAGYTGL"
     assembly_gap    6340..6342
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6425..6694
                     /locus_tag="CPT85_09730"
     CDS             6425..6694
                     /locus_tag="CPT85_09730"
                     /inference="COORDINATES: protein motif:HMM:PF01311.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20555.1"
                     /translation="MDRLINKEYLVTITSNVLYIGLQIASPVLLATLGQDLILGIISK
                     TAPQVNVFQLSFLFKPVLGAAILLWIMPIIVNVINDYFISFAKIF"
     gene            complement(6691..7230)
                     /locus_tag="CPT85_09735"
     CDS             complement(6691..7230)
                     /locus_tag="CPT85_09735"
                     /inference="COORDINATES: protein motif:HMM:PF14279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="DAB20556.1"
                     /translation="MDNAGNRNFSRVLLLDYKNKPLRICSWKRALRLLLKGKAQCAKS
                     IRNIEDYLSIDNTQIPKVIRLNYDVAVPNAELPFCRENVFVRDEYTCQYCGKKFRASD
                     LTLDHVYPKSRYGPDIWENIVTCCKECNQFKADKTPKEAGMKLLRRPFRPKGYFEFEM
                     KKYSYREQQYWQQWSFKTA"
     assembly_gap    7381..7442
                     /estimated_length=62
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <7443..8182
                     /locus_tag="CPT85_09740"
     CDS             <7443..8182
                     /locus_tag="CPT85_09740"
                     /inference="COORDINATES: protein motif:HMM:PF00528.20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20557.1"
                     /translation="VSFMTDSQIFSFPPGFIPHPFTFANYANIFEKLPVTRFFLNSLF
                     VALITTFFQVLFSAMAGFAFARGSFRHKDLLFFMFLVTMMIPPQVNIIPLFFLMRELH
                     LIDTYQALILPGVFGGFGVFLMRQWFKSMSSEIEDAAKIDGCNMLQTFFKIALPLSLS
                     ALVTLALFTFITTWNSFMWPLIVTNSPEITTLPVALSAFKSSFRETVLWGDLTACSIV
                     LSLPVTAVFLLGKKYFISDMLSGGIKE"
     gene            8273..>8613
                     /locus_tag="CPT85_09745"
     CDS             8273..>8613
                     /locus_tag="CPT85_09745"
                     /inference="COORDINATES: protein motif:HMM:PF00072.22"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20558.1"
                     /translation="MEKTEGKILIVDDNSLNAELLAETLAPLNYEMVVYSNPVKALED
                     LKNTKIDLVLTDVVMPAMDGFFFAEQFLKQHPNTPVIYISSHFENENKIKSYNLGSYT
                     YIEKPFDVKTT"
     assembly_gap    8614..8629
                     /estimated_length=16
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8796..9695
                     /locus_tag="CPT85_09750"
     CDS             8796..9695
                     /locus_tag="CPT85_09750"
                     /inference="COORDINATES: protein motif:HMM:PF02518.24"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20559.1"
                     /translation="MHKNDEAITLLKNFIKSKKSHTSFRFIIDNDIYTKTDISKIYSN
                     ECHTGYLILIENKTEEIKREEQRENFIEMLTHDLKTPVRAEKRALELLYDGSFGELNS
                     NQKDIIKEILNSSRYMMRMTDNILARYKLESENYALHLTTNSLKQTLQNCIDEVLYLF
                     EEGQQTLKVNIDLDNDVFEYDEKEISLVLTNLIVNASEYSPKNALINVNIKKEGQNIV
                     ISIKDNGPGISKKEQVNIFKEHSSKETRFKKVGSGFGLFIVKNIIEAHNGSVWIESEE
                     NKGCEIILSLPCTKNASVPVKNN"
     gene            10019..10549
                     /locus_tag="CPT85_09755"
     CDS             10019..10549
                     /locus_tag="CPT85_09755"
                     /inference="COORDINATES: protein motif:HMM:PF13174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20560.1"
                     /translation="MDWKKKLKFVFITSAFAVLILIVLSNVVKMTQVSEKDFKTYRQG
                     LEYLNKKDYENAYFNFSNVSRTSAIYEIALLRQALCADELNDSQTASKKFRMFIEKYP
                     ESMFVQKAYYALAQNYFREKEYTKAEKTFNDIKKNFKDSEYKTASNYYLGVIYKQKAE
                     EDIQKDNXXKKHFQKK"
     assembly_gap    10522..10523
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            10606..12063
                     /locus_tag="CPT85_09760"
     CDS             10606..12063
                     /locus_tag="CPT85_09760"
                     /inference="COORDINATES: protein motif:HMM:PF01464.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20561.1"
                     /translation="MSCITEINQLKTPLDQRDYFVIGQAYYKNGALKFALDNFNKAYM
                     SSCWGYLSIIYTKLGDYKKASEIFDNNYPKYSQNLDDEALYKTIENYASICPQGPKEG
                     WNKALAAAQSNNAKGEDFILYRLTKYENTEGKNLLYTKIYTKFPNGNFASDAVANLFW
                     QAYINKQFQEALRLGQIHARDYQNTIAAPKVLYWMGKLTTRLGNKAEAKGFYQKILEK
                     YPDDYYAFRASKQLSYSYHSGWQTKSSHRLVEKSQYIPFPAKHTSISDDSLKLITTIL
                     KLNDYKLLGEIDKENKAVQSWLNYREGKYATSALLARDVLSEYETKPPFSDSIYKLAY
                     QLHYQDTINDYAKFYRLDPYLVTALIREESYFNHKAGSAAGARGLMQLMPATAAYIAR
                     RNGIRYAGADSLYNPTLNIELGCAYLDYAKERLHEDDLLAVXSYNGGPNAVLSWKDTL
                     NYRNFDEFIENIPYPETRDYVKKVYRSYWVYLNVY"
     assembly_gap    11906..11907
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         3993 a         2158 c         2140 g         3762 t
ORIGIN      
        1 acctttcaga cgctgatctg tcaggctgct gttttagcga atctactttt acagaagtaa
       61 atttttctaa cacagattta acatcagctg atttttcaag agcaaatctt gttgaatgta
      121 atttttcagg tgcactctta aacggaacag actacagcta tgcaactgca agctactgta
      181 attttaccga tgctgacatg gcgggtgcag tttttaacga aagtaatctt gaaaattctg
      241 atttttcagc ggcagaaaat atggaagccg taagatttga tgaatctaca atctggcctg
      301 atacagattt gctgcctgaa gattttgaca caacatacac ccgcgatttg tcatcactcg
      361 aagacgatga tgaccatgca tcagctgatt attaattaaa gttttagttt tttgatggta
      421 tgttctgctg tcagttttgc ggaagcaggg ttttggcctg tgattaaatt ttcgtcaaca
      481 accacatgct ctgaccaggg agcagcatct tcaaacagag caccgagctg tctgagcttt
      541 gactctaaca aaaatggcac cattttgtct ttttttataa ttttttcttc ttcatttgta
      601 aaagaagtaa gcctcattcc tttaacaata ggttcatttg tttcggtctt tgcatttatc
      661 aaccccgcag gcccgtggca caatgctgca acaggtttat gagtgttgta aaaatacgac
      721 actatttcac ctaaaagttc attttgagca aggtcaaaca ttggaccgtg gccgcccggt
      781 atgaatattg catcatacgt tttgtaatct acctcatcca gtttttttgt attatccaga
      841 tatttttttg tgtagtccca ttcagtagga tttttgcatt ccaggctgtt ttcatctata
      901 ggtgccactc cgccgagagg gctggcaacc gtaacctcat agccttcatc ttgaaaggca
      961 taataaggta cggcaaattc ttccagccag acccctgttt tatgcaaatc acccgaatcg
     1021 gatgtattag taactacaat cagtattttt tttgtctttt ccatatcttt ctccattaat
     1081 gtcctgatga aaaaaacata tcttaaatat cgcgttgtta cattggaaaa aagcagtaca
     1141 ataaaaactg cctgatatga ttataatcag acagttttta ttattattta tcgtaattat
     1201 gctttcaatg agccgtcaga cagatattcc gttatttttt tagttccgtc atctaaaaac
     1261 tctgttactt ttttagagcc gtnnggtcag ctttttcaat ttaggagaat ttactccggc
     1321 gctaaggtca taaacctttt cctgttttat tccttttcca aagtactgtg ttactgttct
     1381 gatattatct ttcatattat caaccgtttt atccagcatt tgaccggctg cagagcgggt
     1441 agttgtcgga tgttctacat acatgcctcc atcagtaaat gattggacat tgctgccggt
     1501 ttttcttgct ttatttacca tttgtctttt gtgcgcagct aacatttcag gagtttggac
     1561 tgaagaataa actaccttgt cttttctatg acgtgtatct ttcacactta cttttcttgt
     1621 gccatcttca agtctttcaa cttctttaaa aatacgtcca tcttttaaga ataaatcctt
     1681 atcattttga tttctgccat aagtagagat ttccgaaact tcaccgtttt tattaaagct
     1741 tatttctttt actgaaccat ttatataatc aatttctctt acagacgaat aatgattttc
     1801 tatgcgtttt tccattatac cgtcttttgt ataataagtt gttgaggctg aacctccttt
     1861 tgttttcata actcctgaag gataaaacgt tgttgtaagc cccgttttgt caactacttt
     1921 agctttttga ccgttttgat aatagtttgt ggcagcagag actgctccgt ctgcgttata
     1981 ttcaattacc tgctttgttt ggccatttgc atagttttca acatatttta caggttttcc
     2041 tgtttcttca ttaaaaattt taataaattt tctgttgccg ttaggataaa actctaatat
     2101 atcttcaatt ttttttgctg cagtttctgt agctttttgt actgttgaag ctgtttcttg
     2161 ttttattttt cctgcggctt catcagcagt tttgggtgct tctttaatga tttctttaac
     2221 aatttctttt gtttttgcgc tatttttgcc aattacaaaa gcagcaccag ctgcggcaag
     2281 tgcagcaaga gacagcgcaa ttgcnnnnnn ngttttacaa actttttttg taaaactgca
     2341 gatttttctt ctttcgatga ggcgttaaaa ttaacaggcc tttgtggctg aacttttgat
     2401 acttccattt ttaccttttc cttttttact tacagtgacc ttatattcat gaaaatacaa
     2461 aagtgaaatt aattgctata cgcataatcc agcctcatct atcctatcct attagtcatt
     2521 atgagcgagt ttcagctatt ttaaattcaa ctttacaaac cgttacaaac taaatacaac
     2581 gaatatatga tgtgaaaaca gcgtctgatt cttaagatta ctatagggga aattgtaaga
     2641 ttaagggaca gtattttgca gttaagggaa gaggaagaaa cagtaacatc agagttttcc
     2701 gatcagttaa aaagcacttt taactggttt gataccaatt ttacaaaaat tctggaagac
     2761 acattttgcg aattctggaa tgaaaatgct gacgtaaaac tggtctgtgt cagtgaaaat
     2821 accaatattc ttgcagaaag agaagagttt tttgttacgc agataagatt aaacaaagag
     2881 ctttcagttt ttatcaggct gtcaaaaaat attgtcaaaa atctattgga aaacattctt
     2941 ggcccaaacg gaagaaactt caacatagaa aaactcacag aactcgaagc aaaaatccta
     3001 acaggatttg acgatttttt atacaaaaat ttcagccatc ttataaaatc aggcgatgca
     3061 ctccctcaaa acaacacaaa ctataacgaa gcaaatctta cattttttct taaaacaaag
     3121 acaaaaacta tcggaaaact tgtaataaaa attcccgtag ttgcagttga acctgaaaca
     3181 acccagttgg cagaggaatc tttcagcata acagattttc tcaacagcac tgccgaagta
     3241 aaactgaatg taggttacac acgaatccgc ctgaacgagc tcaagcatct tgaaaaagat
     3301 gacatcgtta tgctggagca cagcaaatca aacaaaatgg ttttgactta caacaattac
     3361 tcaacagaaa tcaaagtagt gccaaacccg gcgattatga ttgattatga caattttgac
     3421 gacaacggga acaacccgaa aggagataat acaatgacaa gccctgatat atacaatatg
     3481 tgggacacaa tacaggttga tattggagca gagtttgaaa aagttaagct aacgcttggt
     3541 gaactcaaac aaatctctga aggcctggtt gtggacattg gctctgttta tgacaacaga
     3601 atagatttga aagtagaaga taaaattgtt gcctcgggtg aattaatcat tataaatgac
     3661 aggtacgggg taaaaatcaa tcagatattt acagaagaaa aaaatcaagc ttctgacaat
     3721 gcagagtatg ctcaggaaca tccgcagcag caacagatag aagaaatgct cgacgagcct
     3781 gaatatacgc agcaaaacga gcctgaaaca ccgcctgtac aggaagatac ggatacaagc
     3841 gtaaatgaag aagattttga ctacagtgat tttgacgttg atgacgaaga tctgtaagaa
     3901 aattaaggga acagtttatg ggaacatatc taattaactt tttggtttat tcaatggcaa
     3961 tggtaggatt gttgtttgtt tgtcttatgg tttacaaaaa aacaatggta aacaacaaat
     4021 gctcgaaaaa caaaaatgag ctggatattg aaaatgcact caatctttcg ccaagaaaaa
     4081 ctatatacat tgtaaaagcc ggaaacgaaa agtttttgat tgcttcagat gctgaaagaa
     4141 caacttttct tgccaagcta gatgcatcag gcaaaacacc ggcaatgcag ggttatactc
     4201 ctcagatgag cactattgag gtaataaagc ctgaaaaaaa agaagaaaaa ggcattgatt
     4261 attcagaaat aatgaatgca ataaaatcca cacaaaaaag acagcctgtg atgaaagaaa
     4321 tgctaagaaa actagaacac agtgctatgg aagaatccca acagggtaaa aattaaggaa
     4381 caaaatatgg aaagtgtttt aaaagactta aatccggttt tacagatgct gctagtgatg
     4441 tcagtatttt caatgctgcc gttctttttc acctgtatga ccagtttttt acgttatgca
     4501 attgtttttt ctatgttaaa acaggcactt ggtacacagc aggttcctcc gggaatggtt
     4561 cttgtcggat tatcaattat tttgacaatt tatacaatga gtccggtatt taccaaaatg
     4621 tgggacatgg gctctgtacc gtaccagaaa aacggagata ttgtagctgc aatgacagaa
     4681 ggctcgaagc ctttgaaaga atttatgatg aagcagacaa gacagtctga catgacattt
     4741 tttatacagc tttcaggcgc cccaaagccc aaaacacctg acgacataac aatatggcag
     4801 gttgctccgg cttatatcat aagcgagcta aaaacagcat ttgaaatagg ttttgtaatc
     4861 tatgttccgt ttattgtgct agaccttgtt gttgcaaacg tgttgctggc actaggtatg
     4921 ttcatgctgt cgccgacaat tatatcactt ccgtttaagc tgttgatatt tatcgctgtt
     4981 gacggatgga gcatgatagt acacgggctt gtcaccagtt ttaactaaaa aaggataaaa
     5041 gcttatggaa atgttaatgg aatatatggg caaaggtctc atcacaatgc ttatgatatc
     5101 aatgccgtgc gtgttggttg cggcaggtgt aggtcttgtt gttggtattt tgcaggccgt
     5161 aacacaggtt caagaacaaa caattgctgc agcgccaaag attcttgctg tgtttcttgt
     5221 gttaatgatt atgggcatgg gatacatcaa actcttaaca aaccttttaa cagaaggatt
     5281 tcagcttgct ttcaaccaga ttccggcagc agacagtttt gtactttcat caaactacca
     5341 caaatacaca agaccctttg atgcagaatt taaacagggc gctggaaggt ttgataaaca
     5401 ggaaatcggt gatattatga gaaatcccgg caaaattcct tttattgatt acaattcaaa
     5461 aacaaagcat tacccatcgg acagaatgcc caatccaacg cctaacctga ttgagcgcaa
     5521 cgcgataatg aacagataaa aaagattgtg aggcaggcag atgaaaaaat ttattttatt
     5581 attgacaatg gttctatttt cacaactatt tatcaatgca aatgcaaaag aacctgacaa
     5641 aacaataaat ttgcacactg acggtgctta catattgctg cttaatacaa gacctattga
     5701 aatgaccata agcaatcctc agataattaa tgcagaagtt acaacggaaa tttactcaca
     5761 agactcgcaa attgtcataa aaacattaac cgaaggaatt gcttatatca attataagct
     5821 gaaaaatact ccacaaacta tcaaagtgct tgtagacaac aacgcgcctg ttgataaaga
     5881 tgtaattgaa atagacaaag taaagggata attaagtaaa tgattgacgc agtcttacaa
     5941 tcttttccaa aatattttcc cgaaatcaac aatgcacttg gtgcgggcat ttttattttt
     6001 gcgcgtgtac tcggttttgt aagatttgcg ccggtattaa atagaaaaga aatccccggt
     6061 atgattaaga tttcttttgc tcttattctt accatcattt tgacaatgac agtggaaaca
     6121 ggtccggccn nccggccccc aaggggacat ctcttattct cggcataata ttaaacattg
     6181 ccggagggat gatgataggt tttattgcaa actgcatagt ctctgcaata gctgctgcag
     6241 gggatatgat taacatgcag atgggtcttt cttccgcaat ggttttggac ccaacagcag
     6301 gagctcaggt gtccattctc ggtaattttt tcgggctgcn nntgatgttg gcggggtata
     6361 ctggcttgta aacgctttac acagaagttt tgagatattt cctgtttacg caacagccat
     6421 accaatggat aggctgataa ataaagaata ccttgtaaca atcacatcca acgttttgta
     6481 tataggattg cagattgcat ctccggtttt gctggccact ctcggtcagg atttgattct
     6541 gggcataata tcaaaaaccg caccgcaggt taacgtgttt caattgagct tccttttcaa
     6601 acccgtgctc ggtgctgcaa tactgttgtg gattatgccg attattgtta atgtaataaa
     6661 cgattatttc atatcttttg caaagatatt ttaggctgtt ttaaacgacc attgctgcca
     6721 gtactgctgc tctctgtatg aatatttttt catctcaaat tcaaaatacc cctttggccg
     6781 aaatggtctt cttaaaagtt tcatgcctgc ttcttttggg gttttgtcag ctttaaactg
     6841 gttgcactcc ttgcagcagg taactatatt ttcccatata tcagggccgt accttgattt
     6901 tggatacaca tggtcaagag tcaaatcact tgcgcggaat tttttgccgc aatactgaca
     6961 ggtatactcg tctctgacaa aaacattttc ccgacaaaaa ggcagttccg cattaggaac
     7021 tgccacgtca tagttaagcc tgataacttt aggaatttgt gtattatcaa tactcaaata
     7081 atcctctata tttcgaatac tttttgcaca ttgagcttta ccttttaaca acaaacgcaa
     7141 agcacgcttc cagctgcaaa tccgaagcgg tttgttttta taatccaata aaagcaccct
     7201 gctaaaattt cggtttcctg cgttgtccat tttcggctca cttctttgtt gttacatttg
     7261 tagtataaca tatttttata aaaaaaataa gtgtatgatt ctgatttgtt aacatatatt
     7321 aacgccactt tggcacgtgt tatttgtgtt ttgattgatt aagaattaaa ataatattta
     7381 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     7441 nnctgtttct tttatgacag attctcaaat tttttctttt ccgccagggt tcatacctca
     7501 cccgtttact tttgcaaatt atgcaaatat atttgaaaaa cttcctgtta caaggttttt
     7561 tttaaacagt ctttttgtcg ctttaataac aacttttttt caggttcttt tttcggcaat
     7621 ggccggattt gcttttgcca gaggcagttt taggcacaaa gatttattat tttttatgtt
     7681 tcttgtgaca atgatgattc ctcctcaggt aaacattatt cctttatttt ttcttatgag
     7741 agaattacac ctcatagaca catatcaagc tttgattttg ccgggcgtat tcggaggttt
     7801 tggcgtattt ttgatgagac aatggttcaa gagcatgtca tcagaaattg aagatgctgc
     7861 aaaaattgac gggtgcaaca tgttgcaaac gttttttaag atagctttgc cgttatcgct
     7921 cagtgccctt gtaacccttg ccctgttcac gtttataacc acatggaaca gttttatgtg
     7981 gcctttaatc gtgacaaatt ctcccgaaat aaccaccctt ccggtggcat tatcagcatt
     8041 taaaagcagc ttccgcgaga ccgtcttgtg gggcgattta acagcttgtt caatagtttt
     8101 atccctgcct gtgacagctg ttttcctgct tggtaagaag tattttataa gcgacatgtt
     8161 atctggagga ataaaagaat aaaattaatc aaaattatca tccatgtggg taattcttat
     8221 ttgtgtaaaa acgatttact atgaacatcc accctaaaaa gaagacaagc taatggaaaa
     8281 gaccgaaggt aaaattttaa tagttgacga taattcttta aacgcagaat tgctggcaga
     8341 aacacttgca cctctgaatt atgaaatggt tgtatactct aatcctgtca aagcacttga
     8401 ggatttaaaa aacaccaaga ttgatttagt gcttacagat gttgttatgc ctgctatgga
     8461 tgggtttttc tttgcagaac aatttttaaa gcagcatcca aacactcctg ttatttatat
     8521 cagcagccat tttgaaaatg aaaacaaaat aaaaagctac aatcttggct cttatactta
     8581 tattgaaaaa ccttttgatg taaaaacaac aagnnnnnnn nnnnnnnnna gttcaagacg
     8641 agctgctgaa aaaaaatcaa aagctggata taatttttga attttctaaa agtgaaataa
     8701 tcatcacaga tttaaatttt gatatcacat ctcaaaacaa tgtaatctta gacaaagcaa
     8761 aatataatgg taaaaatttc ttcgaaattt tagcaatgca caaaaatgac gaagcaataa
     8821 ctcttttgaa aaattttata aaaagcaaaa aatctcatac ttctttcaga tttattatcg
     8881 acaatgatat ttataccaaa acagatattt caaaaattta ttccaacgaa tgccacacag
     8941 gttatttgat tcttatcgag aataaaactg aagaaataaa aagagaagaa cagcgcgaaa
     9001 atttcattga aatgcttaca cacgatttaa aaactcctgt cagggcagaa aaaagagcgt
     9061 tggagctttt gtatgacggc agttttggtg aattaaacag caaccaaaaa gatatcatca
     9121 aagaaatttt gaattcatca agatacatga tgagaatgac tgacaatata cttgcaagat
     9181 ataagcttga aagtgaaaat tatgcgcttc atttgacaac aaattcgctc aagcagacat
     9241 tgcaaaactg tattgatgaa gttttgtacc tttttgaaga agggcaacaa actcttaagg
     9301 tcaacataga tttagacaac gatgtatttg aatatgacga aaaagaaata agtttggtac
     9361 tcacaaatct tattgtaaac gcctctgaat attctccaaa aaatgcattg ataaacgtta
     9421 acatcaaaaa agaaggccag aacatagtta tttcaataaa agacaatggt ccgggaatat
     9481 ctaaaaaaga acaggtaaat atttttaaag agcattcctc aaaagaaacc agatttaaaa
     9541 aagtaggctc cggttttggg ctgtttattg taaaaaatat aatagaagct cacaacggca
     9601 gtgtgtggat tgaatctgaa gaaaacaaag gctgcgaaat tattttatct ctgccatgca
     9661 caaaaaatgc ttctgttccc gtaaaaaata attagacaat ttttattggc acatcataat
     9721 agatataatt tttcaccacc gatttttttg aaaacttgcc tgtcagataa gaggcattga
     9781 aagcattttt taaaacaaat tctttttgtt tgtttaaata ttcctcattt gtataaattt
     9841 gcatatctct catattactc gtctctttgt gtttaaactc tttgctctat ggccttaaca
     9901 cttaagaata tgctatattt attgataaaa agccttgctc ttttatctca ttttgaggat
     9961 acttataaga ggcttttaaa tttcaattta atttaaaatc actttagagg aacaaaagtt
    10021 ggactggaag aaaaagttaa agtttgtgtt tataacatct gcatttgcgg tattaatttt
    10081 aattgttctg agcaatgttg taaaaatgac acaggtgtct gaaaaagatt tcaaaactta
    10141 cagacaggga ctggaatatt taaataaaaa agattatgaa aatgcttatt ttaatttttc
    10201 taatgtttca agaacctctg ctatatatga aattgccctg ttaagacaag ccctttgcgc
    10261 tgacgagctc aatgactcac aaacagcatc aaaaaaattc cgtatgttta tagaaaaata
    10321 tccggaatca atgtttgtac aaaaagctta ttatgccctt gcacaaaact actttagaga
    10381 aaaggaatat actaaggctg aaaaaacttt taatgacata aagaaaaatt ttaaagacag
    10441 cgaatacaaa acagcctcaa actattatct tggcgttatc tacaaacaaa aggcagaaga
    10501 agatatccaa aaagataatg annaaaagaa gcattttcaa aaaaaataaa agcaaaaaat
    10561 cattttatac aatatataga agaagcaccc ggcggcaggt ttgctatgag ctgtattaca
    10621 gagattaatc agctgaaaac cccgcttgat caaagggact attttgtaat cggccaggca
    10681 tattacaaaa acggtgcgct taaatttgcg ttggacaatt ttaataaagc atacatgtcc
    10741 tcttgctggg ggtatttgag catcatttat actaagctgg gtgattataa aaaagcatcg
    10801 gaaatttttg ataacaatta tccaaaatac tcacaaaacc tggatgatga ggctctttat
    10861 aaaactattg aaaactacgc atcaatttgt cctcaaggtc caaaagaagg ctggaataaa
    10921 gcgctggctg ccgctcaatc aaataatgcc aaaggtgaag attttatcct ttacaggctg
    10981 acaaaatacg aaaataccga gggaaaaaat cttctgtaca caaaaattta tacaaaattc
    11041 cctaacggaa attttgcttc agatgcagtt gcaaacctgt tttggcaagc atacataaac
    11101 aaacaatttc aagaagcgct tcgtcttgga caaatccatg caagagatta tcaaaacact
    11161 attgccgcac caaaagtttt gtactggatg ggcaaattaa caacaaggct tggcaacaaa
    11221 gccgaggcaa aaggttttta tcaaaaaata ctagaaaaat accctgatga ttattatgcg
    11281 tttagggcaa gcaaacagct tagttactca taccattctg gatggcaaac aaaatcatct
    11341 cacaggcttg tggaaaaatc acagtacata cctttccctg caaagcatac aagtatttct
    11401 gatgacagtt taaaattaat aactacaatt ttaaaactta atgattacaa gttgcttggc
    11461 gaaatagata aagaaaataa agcagtacaa agctggctaa attacagaga aggaaaatac
    11521 gcgacctccg cattgcttgc aagagacgtt ttgagcgaat atgaaacaaa accgccattt
    11581 tctgacagca tatacaaact tgcctatcaa ttgcattatc aagacacaat aaacgactat
    11641 gcaaaattct acaggctcga cccgtatctt gtaacagcgc taattagaga agaaagttat
    11701 tttaatcaca aagcaggaag tgcagcagga gcaaggggcc ttatgcagct aatgcccgca
    11761 actgcagcat atattgcgcg aagaaacggc ataagatacg caggtgcaga ctctttgtat
    11821 aatccaaccc taaacataga acttggatgc gcatatctgg attatgcaaa agaaaggctg
    11881 cacgaagatg atttgcttgc tgtagnntca tacaatggtg gccctaatgc ggtattaagc
    11941 tggaaagaca ctctaaatta tagaaatttt gatgaattta tagaaaatat tccataccct
    12001 gaaacaagag actatgtgaa aaaagtatac agaagttact gggtatatct caatgtatac
    12061 taaaattgcc ttacagcata tattccaaat ttaaattaaa cgttataata accatatgca
    12121 aaaactcctt gaaattaaag atttgaata
//
LOCUS       DABS01000213           14635 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_9338, whole genome shotgun sequence.
ACCESSION   DABS01000213 DABS01000000
VERSION     DABS01000213.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 14635)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 14635)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14635
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..278)
                     /locus_tag="CPT85_09765"
     CDS             complement(<1..278)
                     /locus_tag="CPT85_09765"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20525.1"
                     /translation="MAKIRNLALRDIPKLKKMISMISNLSSADVSFGYKTYVPFPLNL
                     INRFLPLRFKFAQDSYVAIEDKKLCGLVTLKPQEKNPQSWRISKLFLD"
     gene            378..623
                     /locus_tag="CPT85_09770"
     CDS             378..623
                     /locus_tag="CPT85_09770"
                     /inference="COORDINATES: protein motif:HMM:PF02229.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20526.1"
                     /translation="MAAEPKLIATVPRSATEQLQISINEYKGKSYLDMRIYYTTDDGL
                     NWLPTKKGVTVSPENMELLKDAIDEAMKEFMSTDDAE"
     gene            610..2868
                     /gene="priA"
                     /locus_tag="CPT85_09775"
     CDS             610..2868
                     /gene="priA"
                     /locus_tag="CPT85_09775"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="DAB20527.1"
                     /translation="MTPNKNFDTTKEQQEGMFNKYALVLTSVKGIGVKTFSYLIPDEM
                     KTLIKIGQPVLVPFGRMGLINAFVTGFTNYLPEGIRAKKISKILDTTPIFDIDYLKFL
                     EWTADYYFCSIQNVIECAVPMKFLNGAQKELTEKLIEFKTFDNASKRQIEILEKLKEA
                     GKTRLIDFEKSAKTTRATLNKLEALGCVEITQEQVFRNPIEIFKQQNLEPFPPLLDEQ
                     KTVYEEIEKRLGSHSSILLHGVTSSGKTEVYFKAIQKVLEQGKNVLFLAPEIALASVL
                     TQRLARRFGTDKTAIWHSSISDGEKFDVWQKIKNNEIRILAGARSAVFAPLKNIGLII
                     IDEEHESAYKQTMPAPRYDARKVAQKLAELNNCPLLSGSATPDINTYYYAKNSGSLLE
                     MKKRYNDYPMAKVRVVDMREEHHRANHGVFSRSLVSAIEKNLRDKKQTIILMNRRGFS
                     TYTQCLACGEVIQCPKCAIPLIFHSQTQTLKCHYCEHEEPLVTQCPKCGSDALQNCGT
                     GVQKVELIAQKLFPDCNIVRLDSDSLARKNEHIRILEDFRNGKIDILIGTQMLAKGLD
                     NPNVTLVGVINADNGFNLPDFRSCERGFQLLTQVAGRAGRGDNPGEVYFQTYNPDFFG
                     LETAKQQDYKSFYNTEIEAREDFDYPPFSQIIRVILSSKNQFRAERSAQEIAMRLNDI
                     VDKRQLTEPVAVLGPNPCVIERLQEYYRFQILIKNKLGEKGRRFILSFLAQIKLPDDI
                     KLTVDVDPIDIL"
     gene            complement(2874..3068)
                     /locus_tag="CPT85_09780"
     CDS             complement(2874..3068)
                     /locus_tag="CPT85_09780"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20528.1"
                     /translation="MVVVMSKTEKISELKTNKTRKVAFMFNDELWQLFKQTCETNKTK
                     PTWEIEKWILNYLDKNNALD"
     gene            complement(3078..3635)
                     /gene="scpB"
                     /locus_tag="CPT85_09785"
     CDS             complement(3078..3635)
                     /gene="scpB"
                     /locus_tag="CPT85_09785"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="DAB20529.1"
                     /translation="MEMSLKARIEAVLFITAQALEVKDIAEILKEEEDVIEESLLELI
                     MDYSAREGALEIDDENGYILQVKQDYMDIVEQLCPVELKPSVLKTLTIIALKEPIRQS
                     YLKELRSNAYEHVQELLKMGLISRHRDKNGRSFNLKTTPKFAEYFKLKGDAKTLAKIM
                     DLEKQAKEKGEDEDSIDLSEFVEEN"
     gene            complement(3651..4964)
                     /locus_tag="CPT85_09790"
     CDS             complement(3651..4964)
                     /locus_tag="CPT85_09790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017872780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocitrate synthase"
                     /protein_id="DAB20530.1"
                     /translation="MTSNKNTIYFVDVTNRDGVQTSRLGLAKLQKTIINIMLDDMGIS
                     QSEFGFPTTKHELNYLNGNLELVDRGVITKTKLSGWMRAVAKDVVESFRNVPRLKYVN
                     LSQSTSDQMINGKYGGKKTRQDILSQTLEAVDAAKTCGAQIIGVNAEDASRSDLNFLI
                     EYAKECKKHGASRFRYCDTLGFEDPHTAYERIYTIAKEAQIDMEMHFHNDLGMATGCS
                     VLGAKAAIDAGVDAYINTAINGMGERAGNADLISCLLAVLKSSGFAGKYQIDPQIDLS
                     KAWKLAKYTSHAFGVPIPANQPAVGGNAFAHESGIHADGALKDRRNYELYDFEELGRG
                     EPEIVETGRMITVGEYGGIKGFRNVYKNLELEFHDEDEARNILELARYANVHTQLPLT
                     DSELKFIYYYPDIAAKIMTVTPYYVPTGELKKRLEASSNISASIV"
     gene            5161..5457
                     /locus_tag="CPT85_09795"
     CDS             5161..5457
                     /locus_tag="CPT85_09795"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20531.1"
                     /translation="MKKIFALTAATMILAASTAFASCPLRTMPVQNSCSIGVPTGAAA
                     PVSYIVAPVQQRTYLPPCNPCNAKPAKKGFFSKVFSPIQGVYDATLGQIFTNLY"
     gene            complement(5464..6456)
                     /locus_tag="CPT85_09800"
     CDS             complement(5464..6456)
                     /locus_tag="CPT85_09800"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20532.1"
                     /translation="MVSDKFIKNFAVSLTLVFMLSVAGFAADYVTTKLNEIEKNYYGY
                     VTKGTVQTRLSRIERSLYGMNYKTADKTRVDKIYKDLNLGLNNSGPTGGAASAMQTQE
                     SQRADIGPKAEAGIKYPVVDKLEQKVFNKSYENDDIYARLSRLEKQTFKRESTLSLNE
                     RVDALRDKLLGGEARAAADIDPETEEIVLDNGKKYIEDRNYSDFGGVDDSHYNYYSYE
                     NSKNRIPETDTKNMHDDNSVVYAQDYDLDILEKQLFGKRFIQEPPSKRLARLENKVFQ
                     RTFNDNQEARTQRLLAVTTAQKTSKEYDSNKWAQRLNTGIQIGSILLMVLAMIL"
     gene            complement(6688..7545)
                     /locus_tag="CPT85_09805"
     CDS             complement(6688..7545)
                     /locus_tag="CPT85_09805"
                     /inference="COORDINATES: protein motif:HMM:PRK11898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="DAB20533.1"
                     /translation="MIEINKEIKELLFLGPQGSYCETAKNQFLSLLPAKDVEQKPFST
                     VKSIIEYVKDNEYAAAVIPVENSIEGIVRETMDNMLNLNDPSIQISAETVIPVNHCLV
                     SKAGSIRGIKKIISHPQALAQCRNFIEKHFGSNIEQIEKASTSKAAQELTELDDSYAA
                     IANKRTAEIFKLNVLAKNINDEKDNKTRFILLSRCTTTPTDSDKTSIAFATKNQSGAL
                     VKVLNVFDSLNINLLYIDSRPSKKNLGEYVFFVDFEGHIKDEPSQKVLDLIKLNTNYI
                     KILGSYRKF"
     assembly_gap    7672..7717
                     /estimated_length=46
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            7720..9018
                     /locus_tag="CPT85_09810"
     CDS             7720..9018
                     /locus_tag="CPT85_09810"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02878.14,HMM:PF02880.14"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="DAB20534.1"
                     /translation="MEKDGVEKPVIIGYDPRNMAYEFAQFSAKILSQAGFKVTLSDTV
                     VPTPVLAYNAKILDADALMFTASHNPPEYLGIKFIPDYAGPATTEITNAIVENIKNID
                     SISFSSSQVFEIEQKSFKEPYFKHIESIIDFEKIREYFTREDDDGEIIYDGLYSASIG
                     YFDELLRRNNISFESLHMNHDPDFGGGMPEPKAKYLHELIELITHRTSAIGLSNDGDG
                     DRFGVINEKAEYVTPNEIIALLLGHLIKNKGFSGKLVKTVGASRMLDIIAKQYDIDIV
                     ETPVGFKWVGAAMREYDTIIGGEESGGLSIKGHIPEKDGIIADLLVLEMLAYEDKPLW
                     ELQEELKQKAGCVFINERIDVKLQDQQQLDILMKKYCELEKVANFDIKEKDTKDGVKY
                     YLDDDRTWVLIRPSGTEPLLRIYFESDEKAKIEELKAFFC"
     gene            complement(9260..10138)
                     /locus_tag="CPT85_09815"
     CDS             complement(9260..10138)
                     /locus_tag="CPT85_09815"
                     /inference="COORDINATES: protein motif:HMM:PF02616.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20535.1"
                     /translation="MTETAESNLHHEFYAPETSVAGTTALDEMNIISSTPAAAAEQVD
                     GIEILVNMAKTGKVDPWNVDIVDITDKYLTHLFQMKAQNLRLTGRTLLFAAILLRLKS
                     NVLEGIDANQIEGIEEEQFDDFELEDDGWDDGEINTNNVVSLDEVLQRRTSIRLNRSR
                     MVNLKDLIKQLQFYEELDRKQSLKNAHERAKRRVRSYARLTPDDIVNLAHDEYIEKSV
                     EILHENLKKIFETQEKVELNTLTLLGLDKISAYIALLFLTADAEADIDLYQEEFYGEL
                     YAVPYKKPAQTEKETA"
     gene            complement(10154..12562)
                     /locus_tag="CPT85_09820"
     CDS             complement(10154..12562)
                     /locus_tag="CPT85_09820"
                     /inference="COORDINATES: protein motif:HMM:PF02463.17"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20536.1"
                     /translation="MKTLQEVAGLNQSADKYVAQRNELRTQLEALKDEETKLIQAQAP
                     LEAELNNLVKSVEDAKNKIAEFEEFKQNFAGNKDRVEVQVEELGKELKDFKTIQETTL
                     YELDKTKNELNDVQYNVQTAYRKISQMEAQKQAFEDVNFGRAVDTVLNAKIKGVHATL
                     AQLGQVDKEYSTALEVAMGGRMANVVVDDDETARIAIEVLKSANAGRATFLPLNKINK
                     APRSLKLPKDKGVIDFAINLIDFDDEYLNVFFHALGETLVVEDYNSARKLIGQYRMVT
                     LTGELFEKSGSISGGSQKRSGLKFSQTQDDELAKFKERLQAFEKTYAELNKKKEELEL
                     KLDKVRISYSNSMTEYNKAKMELQNLVAQADSNENNIKEKRDYLAQAQPRMQIIEKQL
                     DEMEQKLVNYNEQALKLDEEIKEIEAKMTPEELQNLKKLTEEKENEIKAIDAAILRAH
                     NEIDGFNRTLVFHDDVIDTKTKEIAKLGSDNEIYEQDKVKYKAEIVELKAQIEVLDAK
                     IKELGEKLIELQTERDAVNAQYLELDKEKNLIVLNIEKVSEQIEAFKARRRELEPQLE
                     LVKEELKENGVDISNLVEIEISVEEITGRIQRLQRRMDELGDVNMRAIKSYDEVSERQ
                     NELKTKIDTLSNEKNQILDRMQGYENLKKDTFMNTYNNINDNFKEIFHRLSEGEGTLV
                     LDNHEQPFTGGMSIEAQPRDKEKTRLNLMSGGEKSLTALAFVFAIQRYLPAPFYAFDE
                     VDANLDGINVEKLADMVKTQAENTQFVVVSHRKPMIESANRTIGVTQKEKGITRVTGV
                     KLRD"
     gene            complement(12850..13641)
                     /locus_tag="CPT85_09825"
                     /pseudo
     CDS             complement(12850..13641)
                     /locus_tag="CPT85_09825"
                     /inference="COORDINATES: protein motif:HMM:PF13476.4"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    12860..12869
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            13921..14130
                     /locus_tag="CPT85_09830"
     CDS             13921..14130
                     /locus_tag="CPT85_09830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015229371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="DAB20537.1"
                     /translation="MPKMKTHRAAAKRYKVTASGKILRRSAGTKHLLQHKAVSRKRRL
                     SGMTEVSETHLDLISKELPYKKYSR"
     gene            14144..14494
                     /locus_tag="CPT85_09835"
     CDS             14144..14494
                     /locus_tag="CPT85_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010477428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="DAB20538.1"
                     /translation="MRVKRGNVLRKRHKKILKLAKGFIGARSRIFKVANTAVMKKLKY
                     QYRDRRNKKRTMRRLWIVRINAAVRQHGLSYSKFMNALKKADIQVNRKMLAEMAVNEP
                     EAFSVVVETAKAKA"
BASE COUNT         4073 a         3058 c         2903 g         4545 t
ORIGIN      
        1 tcgtcaagaa aaagctttga aatcctccag ctctgggggt ttttttcctg cggctttagc
       61 gtgacaagcc cgcagagctt tttgtcttct attgccacgt aagaatcctg cgcaaattta
      121 aaacgcagcg gcaaaaatct gttaatcaaa tttaatggaa aaggcacata agttttgtac
      181 ccgaaagaca catcagcact gctcaaattg gatatcatag atatcatctt tttgagtttt
      241 ggaatgtctc ttaaagctaa atttctaatc tttgccataa attcgatttc tatccttaat
      301 attattttat cattttttat taaacttaca aaatgcatgc tacaataaaa tttgaaaatt
      361 aataagagga gaaaaacatg gcagcagaac caaaattaat cgctactgta cccagaagcg
      421 caactgagca gttacagatt tctatcaacg aatacaaagg taaaagctac cttgatatga
      481 gaatttatta cacaacagat gacggcctca actggctgcc cacaaaaaaa ggcgtaactg
      541 tttcacctga aaacatggaa cttttaaaag acgctattga cgaagcaatg aaagagttta
      601 tgtcaactga tgacgccgaa taagaatttt gatacaacaa aagaacaaca agagggcatg
      661 tttaacaaat atgcccttgt tcttacgtct gtaaaaggca tcggggtcaa aaccttcagc
      721 tacctcattc ctgatgaaat gaaaaccctg ataaaaatcg gccagcccgt tcttgtgcct
      781 tttggcagaa tggggcttat taacgccttt gtcacggggt ttacaaacta tctgccggaa
      841 ggaatcagag caaaaaaaat ctcaaaaatc cttgatacaa ccccgatttt tgatatcgat
      901 tatctcaaat tccttgaatg gacagcagat tactactttt gctccataca aaacgttatc
      961 gaatgcgctg ttcccatgaa atttttaaac ggagcacaaa aagagcttac ggaaaaactc
     1021 atagagttta aaacctttga caacgcatca aaaaggcaga ttgaaatcct tgaaaaacta
     1081 aaagaagccg gcaaaacaag gctcattgat tttgaaaaat ccgcaaaaac cacacgcgct
     1141 accctgaaca aactcgaggc tctgggctgt gttgaaatta cacaggagca ggtttttaga
     1201 aaccctattg aaatttttaa acagcaaaac cttgaaccct tcccgcctct tttggacgaa
     1261 caaaaaaccg tttatgaaga gatagaaaag cgccttggct cgcattcgtc gattctgctg
     1321 cacggggtta cgtcatcggg caagacagag gtgtatttta aggcaataca aaaagtgctt
     1381 gaacagggca aaaacgtgtt gtttttggcg ccggaaattg cactggcttc tgtgttgaca
     1441 cagcgtcttg caagaaggtt cggcacagac aaaacagcca tctggcactc gagcatttct
     1501 gacggcgaaa aatttgacgt gtggcaaaag ataaaaaata acgaaatcag aatccttgca
     1561 ggagcgcgct ctgccgtgtt tgcaccgtta aaaaacatag ggctcatcat cattgacgaa
     1621 gagcacgaaa gcgcatacaa acaaacaatg cccgcccccc gctatgacgc aagaaaagta
     1681 gcgcaaaaac tggcggaact caataactgc ccgcttcttt caggcagcgc aacccctgat
     1741 ataaatacat actattacgc aaaaaactcg ggcagcctct tagaaatgaa aaaacgctac
     1801 aatgactacc ccatggcaaa ggtccgtgtg gtggatatgc gagaagaaca ccacagagca
     1861 aaccacggcg tgttctcacg cagccttgtg agcgcaattg aaaaaaatct tcgtgacaaa
     1921 aaacaaacca tcatcctgat gaacagaaga ggtttttcga cctataccca gtgccttgcg
     1981 tgcggcgagg ttattcagtg cccaaaatgc gcaattccat tgatttttca ctcacaaaca
     2041 caaacgctga agtgccacta ctgcgagcat gaggagcctc ttgttaccca atgccccaaa
     2101 tgcggaagcg atgcattgca aaactgcggc acaggtgtgc aaaaggtaga gctgattgcg
     2161 caaaagctgt ttccggactg caatatagtg cggctggaca gcgattctct tgcacgaaaa
     2221 aatgaacaca tccgcatatt ggaagatttc aggaatggaa aaatcgacat tctgataggc
     2281 acccagatgc tggccaaagg gctggacaac cccaatgtaa cgcttgttgg cgtaataaat
     2341 gctgacaacg ggtttaatct gcctgatttt cgctcatgcg agcggggatt tcagcttctc
     2401 acacaggttg caggccgtgc aggcagagga gacaacccgg gtgaagtgta ttttcagact
     2461 tataaccctg actttttcgg gcttgagacg gcaaaacaac aggattacaa gagtttttac
     2521 aatacagaaa tcgaagcccg cgaagacttt gattacccgc ctttcagcca gattatccgc
     2581 gtgattctgt cttcaaaaaa ccaatttaga gcagaaagaa gcgcgcaaga aattgcaatg
     2641 cggcttaacg atattgtgga caaaagacag ctgacagaac ccgtggctgt tcttggcccc
     2701 aatccgtgtg taatagagcg tttgcaggag tattacaggt ttcagattct cataaaaaac
     2761 aagctcggcg aaaaaggccg caggtttatt ctgtcttttc tcgcacaaat caagctgccc
     2821 gacgacataa aactcaccgt cgacgttgac ccgattgata tattataggc catttaatcc
     2881 aatgcattat ttttatcaag ataattgaga atccatttct caatttccca tgtcggcttg
     2941 gttttattgg tttcacaagt ttgtttgaac aactgccaga gctcatcatt gaacataaag
     3001 gccacttttc ttgttttatt agtctttaat tctgatatct tttctgtctt gctcataaca
     3061 accaccatga taacgaccta attctcttcc acaaactcgg aaaggtcgat ggagtcttcg
     3121 tcttcgcctt tttctttggc ttgtttttcc aaatccataa tcttggcaag ggttttggca
     3181 tcacctttta atttaaaata ctccgcaaat tttggagtgg ttttaaggtt gaaagagcga
     3241 ccgtttttat ctctgtgacg agatattaat cccattttca aaagttcttg tacatgttcg
     3301 taagcatttg agcgcaattc ttttaaataa gactgcctga taggctcttt caatgcaatt
     3361 atggtaagag ttttaagcac tgatggcttt aattctacag ggcaaagctg ttctacaatg
     3421 tccatgtaat cttgttttac ctgaaggata taaccatttt cgtcatcgat ttcgagtgcg
     3481 ccttctcttg cagaataatc cataatcagt tcaagaagcg actcttctat cacatcttct
     3541 tcttctttta aaatttccgc aatatctttg acctcaagag cctgtgcggt gataaacaat
     3601 acagcttcaa ttctggcttt tagtgacatt tccatactct cctgaccgta ttatactata
     3661 gaagcggaaa tattgctcga agcctcaaga cgttttttca gctcgcctgt gggcacataa
     3721 tacggtgtaa ctgtcataat ctttgctgca atgtcaggat aataatatat aaacttcaat
     3781 tcgctgtctg tgagcggaag ttgcgtgtgt acgttagcat aacgcgccag ctcaaggatg
     3841 tttctggcct cgtcttcgtc gtggaactcc agctcaaggt ttttgtaaac gtttctaaaa
     3901 ccttttattc cgccgtattc acccacggta atcattctgc ctgtttcaac aatttcaggt
     3961 tcacccctgc cgagttcttc aaaatcgtaa agctcgtagt ttctgcggtc ttttaaagca
     4021 ccatcagcgt ggatgccgga ttcatgagcg aatgcgtttc cgccaactgc cggctgattt
     4081 gcaggtatgg gtacgccaaa tgcatgtgag gtatattttg caagtttcca cgctttggac
     4141 aaatcaatct gcgggtctat ctgatatttg ccggcaaatc cgcttgactt taacaccgcc
     4201 agcagacacg aaatcaaatc cgcattaccg gcccgttctc ccattccgtt aattgccgtg
     4261 tttatataag cgtctacgcc ggcatcaatt gcggcctttg caccgagaac agaacaaccc
     4321 gtagccatgc caaggtcgtt gtggaagtgc atttccatat ctatttgagc ttctttagca
     4381 attgtataaa ttctttcata agctgtgtgg gggtcttcaa aacccagagt gtcacagtat
     4441 ctaaaacggc ttgcaccgtg ttttttacac tcttttgcgt attctatcaa aaagtttaaa
     4501 tcgcttcttg aggcgtcttc tgcgttaacg ccgatgattt gagcgccgca agtctttgct
     4561 gcatcaacag cttcaagggt ttgtgacagg atatcctgtc ttgttttttt accgccgtat
     4621 ttgccgttta tcatctggtc tgatgtggat tgcgaaaggt tgacatattt gagccttggc
     4681 acgtttctaa aagattccac aacatctttt gcaacagccc tcatccagcc cgagagtttt
     4741 gtttttgtaa taacccctct gtccacaagc tcaagattgc cgtttaagta attaagctcg
     4801 tgttttgttg tgggaaaacc aaactctgat tgagaaatgc ccatgtcatc aagcatgata
     4861 ttgattatgg ttttttgcaa ttttgcaagc cccaaacgtg atgtttgcac cccgtctctg
     4921 tttgtaacat ccacaaaata aattgtattt ttgttgctgg tcataggctt tttcggctcc
     4981 tgtaggctgt taatttaata agtgtgatta taacatattt tagcccattt tgagcaaatt
     5041 gtaattaatc ggggctataa atttacttag ctaattagtc taatgtattt ttttgcagaa
     5101 atgtaacaat gggtatgtga gcaaaagagc tcacgcagta aaactaagga gaaagatttt
     5161 atgaaaaaga tatttgcatt aacagcagcc acaatgattt tagctgcatc aacagcattt
     5221 gcatcatgtc cgttaagaac aatgcctgtg caaaattcat gctctattgg agtgccgaca
     5281 ggtgcagctg ctccggtcag ctatattgta gctcctgtac agcagaggac ttatcttccc
     5341 ccctgcaacc catgtaatgc aaaacctgca aaaaaaggat tctttagcaa agtattttcc
     5401 cctatccagg gtgtttatga cgctacatta ggccaaattt ttactaattt gtactaaccg
     5461 ctgctaaaga atcatagcca gtaccattaa caggatactg ccgatttgaa tgcccgtgtt
     5521 taaacgctgc gcccatttgt tggaatcata ttccttagaa gtcttttgtg cggtggttac
     5581 cgccagaaga cgctgggtgc gagcttcctg gttatcgttg aaagtacgct gaaacacttt
     5641 gttttccagg cgggcaagac gttttgaggg cggctcttga atgaatcttt taccaaagag
     5701 ctgcttttcc aaaatgtcta aatcataatc ctgtgcatac acaacagaat tgtcatcatg
     5761 catattttta gtatcagttt cggggattct gtttttagag ttttcgtagc tgtaatagtt
     5821 gtaatgagaa tcatcaaccc cgccaaaatc cgaataattg cggtcttcaa tatatttttt
     5881 gccgttgtcg aggacaattt cctcagtctc ggggtcaata tcagcggcgg ctcttgcttc
     5941 ccctcccaaa agtttgtcgc gaagcgcatc cactctttca ttcaaagaga gggtgctttc
     6001 tcttttaaag gtctgttttt ccagccttga caaacgcgcg taaatgtcat cgttttcgta
     6061 tgatttgtta aaaacttttt gctccagttt gtctacaaca gggtatttta tcccggcttc
     6121 ggctttaggg ccgatgtcgg cacgctgtga ttcttgcgtt tgcatggccg atgcagctcc
     6181 gcctgtgggg ccggagttat tcagacccag attgaggtct ttatatattt tgtccactct
     6241 tgttttatca gcggttttgt aattcatacc gtaaagcgag cgctcaatac gcgaaagacg
     6301 ggtctgtacc gtgccttttg tgacatagcc gtaatagttt ttttctattt cattgagttt
     6361 tgttgtgaca taatccgctg caaaacctgc aactgacagc atgaacacaa gcgtaagcga
     6421 aacagcaaag ttttttataa atttatcaga caccatagtt taaaaacccg tttatacttt
     6481 ttcgaatact ataaattaaa cggatttttg agctgtctca attctcccga aatttttaaa
     6541 acacccaaaa tactacccta aaaaaaataa tactttaagg taatgaaatc aaaaaaaacg
     6601 cacaataata acaaaaaaaa ccaaccagag cgtataattt gaagtttagt tttgaatcaa
     6661 aaaaatagtc tcactttttc aaaaggttca aaattttctg taactaccaa gtatttttat
     6721 gtaatttgtg ttcagcttta tcaaatccag caccttttgc gagggctcgt ctttgatatg
     6781 accttcaaaa tcaacaaaga aaacatactc gccgagattt ttctttgacg ggcgtgaatc
     6841 tatgtacaaa aggttaatat taaggctgtc aaaaacgttg agcactttaa caagcgcgcc
     6901 ggattgattt ttagtagcaa aggcaatgct cgttttgtca gagtccgtag gggttgttgt
     6961 gcagcgcgaa agcagaatga atcgggtttt gttatctttt tcgtcgttga tatttttcgc
     7021 cagcacattc agtttaaaaa tctcggctgt ccttttgttt gcaatggctg catacgagtc
     7081 atccagctct gtaagctcct gtgctgcttt gcttgtggac gctttttcaa tctgctcaat
     7141 atttgagccg aagtgttttt caataaaatt tctacactgt gcaagcgcct gcgggtgaga
     7201 gataattttt tttatccccc tgatacttcc tgcctttgaa acaaggcagt ggtttacagg
     7261 gataacggtt tccgcgctta tctgtatgga agggtcattg aggttgagca tattgtccat
     7321 ggtttctctt acaatgcctt ctatggaatt ttctacaggt attacggcag ctgcgtattc
     7381 attgtctttt acgtattcga taatactttt gactgtagaa aaaggctttt gctcaacatc
     7441 ttttgccgga agaaggctca aaaactggtt tttggctgtt tcgcaatacg agccctgcgg
     7501 ccccaaaaac aaaagttctt taatttcttt atttatctca atcattttgc cctgcaccgt
     7561 ttctctggta aaatatatat ttattaaaac attgtacaaa aaggttgagg aaatgacaaa
     7621 taacgtatct gcgataaagt ttggcactga cggctggaga gctgttgtag gnnnnnnnnn
     7681 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnttt tggaaaaaga cggggtggaa
     7741 aaacccgtaa tcataggcta tgacccgaga aacatggcat atgagtttgc acaattcagc
     7801 gcaaaaattc tttctcaggc cggctttaaa gttaccctgt ctgatacggt tgtgcccaca
     7861 cctgtacttg cgtacaatgc aaaaatactg gacgctgacg cgttgatgtt cacggcgtct
     7921 cacaatccgc ccgagtatct ggggataaaa tttatacctg attatgcggg ccctgccaca
     7981 accgagatta caaacgccat tgtggaaaac atcaaaaaca tagacagcat aagcttttcg
     8041 tcttcacagg tttttgaaat cgaacaaaaa tcctttaaag aaccttattt taaacacatt
     8101 gaatcaatca tcgactttga aaaaatacgc gaatatttta ctcgcgagga cgacgacgga
     8161 gagataatct acgacggcct ttacagcgca agcatagggt attttgacga gctgttgaga
     8221 cgcaacaaca taagctttga gtcgcttcat atgaaccatg acccggattt tggcggcgga
     8281 atgcccgagc caaaagcaaa ataccttcac gaattgattg agctaatcac ccacagaaca
     8341 agtgcaatag gccttagcaa cgacggcgac ggcgacaggt tcggcgtgat aaacgaaaaa
     8401 gccgaatacg ttacgccaaa cgaaattatt gcactgcttt taggacattt gattaagaac
     8461 aaaggttttt caggcaagct cgtaaaaacc gtgggcgcaa gccgtatgct cgacatcatt
     8521 gcaaagcagt atgatattga tattgttgaa acgccggtcg gttttaaatg ggtgggtgca
     8581 gcaatgcgcg agtatgacac aatcattggc ggcgaagaat caggcggttt gagcataaaa
     8641 ggccacattc ctgaaaaaga cggcattata gccgacctgc ttgtgctcga aatgcttgct
     8701 tacgaagaca agccgctgtg ggagcttcaa gaagagctca aacaaaaagc aggctgcgtt
     8761 tttatcaacg aaagaataga tgtaaaactt caagaccagc agcagcttga tattttgatg
     8821 aaaaaatatt gtgagctgga aaaagtcgca aactttgaca taaaagaaaa agacacaaaa
     8881 gacggcgtaa aatactacct tgatgatgat cgtacatggg tgctcatccg cccgagcggc
     8941 acagagcctc ttttgagaat ttattttgaa agcgacgaaa aagccaaaat tgaagaattg
     9001 aaagcgtttt tttgttaaca gtttgaattg ttaacttttg taataaaaaa tatcaaaacg
     9061 ggaaattttt ttctttgacg aaacttatga aatcagaagt aagtgaaaat tttgttaaag
     9121 tcttaaattc cccgtgaatt tttgtgtgtg aaaaacttaa ttaactccat aaactctata
     9181 acctaactac caaaattact aaccgaatca acgcctttga ctcatactca aaggcatttt
     9241 tttacagaat ttatgacact caggctgttt ctttttctgt ttgagcaggt tttttgtatg
     9301 gcacagcata aagctcgcca taaaactctt cctgatacaa atcaatatca gcctctgcat
     9361 ctgctgtcaa aaacaaaagc gcaatgtaag cggaaatttt gtccagacca agcagtgtca
     9421 gggtattgag ctctactttt tcctgtgttt caaagatttt tttaaggttt tcgtggagga
     9481 tttccacact tttttcaatg tactcatcgt gagcaaggtt cacaatgtca tcaggcgtaa
     9541 gccttgcata agaccgcaca cgtctttttg cacgctcgtg agcgtttttt aaagactgtt
     9601 ttctatccag ctcttcataa aactgcagtt gtttaataag gtctttcaag ttgaccatac
     9661 ggcttctgtt aagacggata cttgtgcgtc tttgaagcac ttcgtctaag gacacaacat
     9721 tgtttgtatt tatttcaccg tcatcccagc catcgtcctc tagttcaaaa tcgtcgaatt
     9781 gttcttcctc aattccctca atctgattag cgtcaatgcc ttctaaaaca ttggatttta
     9841 aacgtaaaag aatagcagca aaaagcaaag ttctgcctgt taaacggagg ttttgcgctt
     9901 tcatttgaaa aaggtgtgta agatatttgt ctgtgatatc aacaatatca acattccacg
     9961 ggtcgacctt acctgttttg gccatattta caagaatttc aataccgtca acctgttctg
    10021 ccgcagcagc aggggtagag gaaattatat tcatttcatc cagcgcagtt gtaccggcaa
    10081 ctgatgtctc cggtgcataa aattcatgat gtaaattaga ttcggctgtt tctgtcatat
    10141 tttttcccga ttattaatcc cttagtttta cgcctgttac gcgtgttatg cctttttctt
    10201 tctgcgttac gccgattgtc ctattagctg attctatcat aggtttacgg tgactaacta
    10261 ctacaaattg cgtattttct gcctgtgttt ttaccatgtc agcaagcttt tcaacattga
    10321 taccgtcaag gtttgcgtct acctcgtcaa acgcataaaa cggagccggc aaatatcgct
    10381 ggattgcaaa cacaaacgct aaagcagtaa gtgatttttc cccacccgac ataaggttaa
    10441 ggcgtgtttt ttccttatcg cgcggctgtg cctcaataga catgccgcct gtgaaaggct
    10501 gttcgtgatt gtccagcaca agcgtacctt caccctcgga taatctatgg aaaatctctt
    10561 taaagttgtc gtttatgttg ttataagtat tcataaacgt gtctttttta aggttttcat
    10621 aaccctgcat tctgtctaaa atctgatttt tttcgttaga cagcgtgtca atttttgttt
    10681 taagttcgtt ttggcgctcg gaaacctcgt catacgactt gatagcgcgc atgttaacat
    10741 cgccgagttc gtccattctt ctttgcaggc gctggattct gcctgtgatt tcttcaacgg
    10801 atatttcgat ttccacaagg tttgaaatat caacgccgtt ttctttaagc tcttctttaa
    10861 caagctctaa ttgcggctca agctcgcgtc tgcgggcctt gaaagcttcg atttgctctg
    10921 atactttttc aatatttaaa acaatcaaat tcttttcttt gtccagctca agatactgcg
    10981 cgtttacagc gtcacgctct gtttgaagtt cgatgagttt ttcgccaagc tctttaattt
    11041 ttgcatcgag cacttcaatc tgcgctttta attcaacgat ttcggctttg tatttaactt
    11101 tatcctgctc ataaatctcg ttgtccgagc cgagttttgc gatttctttt gtttttgtat
    11161 caataacatc atcgtggaac acaagggttc tgttaaaccc gtcaatctcg ttgtgggcgc
    11221 ggagaatcgc cgcgtcaatc gctttaattt cgttttcttt ttcttctgtg agctttttga
    11281 ggttctgaag ctcttctggc gtcatttttg cttcgatttc tttgatttct tcatcgagtt
    11341 tgagcgcctg ttcgttgtag tttacgagtt tttgctccat ttcatcaagc tgtttttcga
    11401 ttatttgcat tcttggctgc gcctgcgcaa ggtaatcgcg tttttcttta atattgtttt
    11461 catttgaatc tgcctgagca acaaggtttt gcagctccat tttggccttg ttgtactctg
    11521 tcattgagtt tgaataagaa attctgacct tatcaagttt gagttcaagc tcttctttct
    11581 ttttgtttaa ttctgcataa gttttttcaa acgcctgcaa tctttcttta aattttgcaa
    11641 gctcatcgtc ttgagtctgg ctgaatttga gacccgaacg tttttgcgaa ccgcctgaaa
    11701 ttgagcctga tttttcaaac aactcgccgg ttaaagtaac cattctgtat tggccgatga
    11761 gtttacgcgc gctgttatag tcttccacaa caagggtttc gccgagtgca tggaaaaaca
    11821 cattcaaata ctcatcatca aaatcaataa gattgattgc aaaatctata acgcctttgt
    11881 cttttggcag tttcaaagaa cgcggcgctt tgttaatttt gttcaaaggc aagaaagttg
    11941 cgcggcctgc gtttgcgctt tttaaaactt cgattgctat tcttgccgtc tcatcatcat
    12001 ccacgaccac attggccatt ctgccgccca ttgccacttc cagcgcggtt gagtattcct
    12061 tatcaacctg tcctaattgc gccagtgtgg catgcacgcc ttttattttt gcattaagca
    12121 ccgtgtcgac cgcgcgtccg aagtttacgt cttcaaaagc ctgtttttgt gcttccatct
    12181 gtgatatttt gcggtaagct gtctgcacat tgtactgcac gtcgttgagt tcgtttttgg
    12241 ttttatcaag ctcatacaga gtggtttcct gtatggtttt aaagtccttg agctccttgc
    12301 cgagctcttc tacctgaacc tcaacgcggt ctttgttgcc tgcaaagttt tgtttgaatt
    12361 cttcaaactc tgcaattttg ttttttgcgt cttcaacgct ttttacaagg ttatttaatt
    12421 ccgcttcaag cggagcttgt gcctgaataa gctttgtttc ttcgtcttta agcgcctcaa
    12481 gctgagtgcg aagctcgttt ctttgtgcaa cgtatttgtc agcactctgg tttaaacccg
    12541 caacctcttg caaagtcttc atcaaatcct cttgctttga ggttttgtct tcttcgagtt
    12601 tttttatttc ctgatttttt gcttcgatgt tgctttgagt ctgttctttt ttctttttaa
    12661 ggtcttctat accgtttttg gcattttcga tagtttttaa attatcctga atccctttgt
    12721 ccgcatagac aatggcagat tcttttctgt ctacctgacc tttaatttct tcaacctgtt
    12781 ttttgacctc gatttgctcg gcctcgcctt tttcttttac aaggtctgaa agttcatcga
    12841 gttttgtttt taccttaagn nnnnnnnnnt gagtttgttt tcttcttctt ttttcttttt
    12901 gtttgcgtca agaatgctct cgtgcgtgcg ctcgaggttc tttttgatat caaagtattt
    12961 tactgttgta attttagact cgaggtctgt tttttcgtcg cgcaattttt gatatttcaa
    13021 agcaacttcg cgttctgctt tcagggtttc gagtcttgtt tcaacttccg acaaaatcaa
    13081 aagcgaattt tgaacacggg attctacagt ccccagctca ttttgcgcct gttctatacg
    13141 gcggtcaaag tcggcaacgc cggcgatttc gtctatgatt tttcttcttt caacatcaga
    13201 gcagtttgtg atagacataa cgtcgttttg catgatgacg ttgtagctgt tgggggtgat
    13261 gttgtatttt tccagaattg tgtgaacatc tgtgagcgta acgattttgt cgttaaggta
    13321 atagatagaa ttgtagcctt gcgaggattt tttgatttta cgcgcaacgg agaactcttt
    13381 ttcttcgccg ttttcggggg caaaagttac tttaacaata gcttcgtttc tgcgtgtgtg
    13441 agtggagata agctgggata ttttttccgc acgcaaagtt cgagacgtag acaggccaag
    13501 cgcaaacagc acactgtcaa tgatgttgct cttccccgag ccgttcgggc ccgaaatagt
    13561 ggtaaaacct ttcaaaaacg gtattgtaag cttgtttgca aaagatttga agttatctat
    13621 ttctacttct ttaatgtaca ttaactcaat ctaatcccaa gtctaaacat atgtatctct
    13681 tattttctta taaacccgaa agatagtcaa aaaagttacg attggttaag attttacata
    13741 tcttcatcag gccttgcatg gcggggtttt tgttttacaa taaattatac tgatactctg
    13801 tggacggcat gtcacagggg ttagaaaggg gctctggcaa aacccgggcg ccggataagt
    13861 taagacaagg gctgcggcac aaagtggaaa cacccgtaag caccacgaaa ggagaaaact
    13921 atgccaaaga tgaaaacaca ccgcgcggct gcaaaacgct acaaagtgac agcttccgga
    13981 aaaatcttga gacgttctgc cggtacaaaa cacttgcttc aacacaaagc agtgagcaga
    14041 aaaagaagat tgtcaggtat gacagaagtt tctgaaacac atttggattt aatttcaaaa
    14101 gaattaccgt acaaaaagta ttcaagataa ggaaggttaa acaatgagag taaaacgcgg
    14161 aaatgtctta agaaaaagac ataaaaaaat attaaaatta gctaaaggct ttattggcgc
    14221 aagaagcaga atctttaaag ttgctaacac tgctgtaatg aaaaaactca aatatcaata
    14281 cagagacaga cgcaacaaaa aaagaacaat gcgtcgtttg tggattgtaa gaatcaacgc
    14341 tgctgttaga caacacggct tgagctattc caaattcatg aacgcactca aaaaagctga
    14401 tattcaagtt aacagaaaaa tgcttgccga aatggctgtt aacgaacctg aagctttctc
    14461 tgttgtagta gaaacagcta aagctaaagc ataataaaag ctgattaaaa aaaattaaca
    14521 aaatacctcg aaagtttatg acttgcgggg tatttttatt atattattaa attatgaaaa
    14581 aattattgct tatcgtctta atgctttttt tgactttacc cgcttctgct ttgat
//
LOCUS       DABS01000214            6156 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_19067, whole genome shotgun sequence.
ACCESSION   DABS01000214 DABS01000000
VERSION     DABS01000214.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 6156)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 6156)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6156
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..638)
                     /locus_tag="CPT85_09840"
     CDS             complement(<1..638)
                     /locus_tag="CPT85_09840"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20502.1"
                     /translation="MLRINQVRHYAELCGVKSILQTSPLKTGKGHLDLNNLKYDKTAA
                     DRFSLTPRYAQNPDFIANLKLTAENRHLATEALLNKKLQKMLDRYADDRDKINQVNKF
                     ITQINDKNIKYLDDVIDIAKKKHIDMDYYPYLLHGWNKDTYKILDXKKQIHLFDRLLD
                     TIKRRGHSYDSVKKVLNTEHPVLDANALRLLEFKNFDKYKTVTLDNFSKLPI"
     assembly_gap    195..196
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(725..1705)
                     /locus_tag="CPT85_09845"
     CDS             complement(725..1705)
                     /locus_tag="CPT85_09845"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20503.1"
                     /translation="MAETLTYKVQKYTEDIKNIFKGVYNDFKNKAYSEYKFELEPLEY
                     EDFCLSVEQGLINCLVLLEDEIPTAFMVYTTEISEAVELNMIHCIGEENLNDKRKMLM
                     DKFMELNKELIKEKVVTYPMLGAQEQFTPEITKYGFKLVGLAVERFEFSNIHSIQLFK
                     NYTPKALPEGYKIVEWDAKYCDEVINVINTAFKNTSDALFDPRFASKEGCTDILNKIV
                     TSVYGKFLPECTSVLLFNKKPVGICFTNITAGRIANIPLIGMGSEHCAKGLGEAMLQA
                     SVAKMISKYINQLTEVNASTETDNYPALKMYRRLGSKEDYYYPQAYRPIL"
     gene            complement(1706..2977)
                     /locus_tag="CPT85_09850"
     CDS             complement(1706..2977)
                     /locus_tag="CPT85_09850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012991328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="DAB20504.1"
                     /translation="MSLLENIKDLFNKDNTFRFDTVEEAIETIKNGGMVIVADDESRE
                     NEGDLICAAEFATPENVNFMITEAKGVLCAPISVSRAKKLGLDFMVKDNTDVKGTAFT
                     QSVDGDPKFGVTTGVSAFDRSVTLKLIADDNTIPSDLRQPGHIFPLIAKEGGVLERVG
                     HTEASVDLCKFAGLKDAAVCCEIVNPDGSMARRDDLRKFADKHNIKFITVAQLIAYRL
                     KNERLMVREAEVTMPTAFGTFKLIGYRHSVTGQEHVALLKDDGTDKIPLVRMHSICLT
                     GDTFHSLRCDCNSQLQNSMQMIEEYGKGAVVYLMNHEGRGIGIVNKIKAYALQDKGED
                     TIQANLSLGFNSDLRDYGDGAQILLDLGFKRFRLITNNPQKIVGLEGYGLEISERVQV
                     ESECTKFNYKYLCTKANKMHHMLDINKMEQK"
     gene            complement(2977..3630)
                     /locus_tag="CPT85_09855"
     CDS             complement(2977..3630)
                     /locus_tag="CPT85_09855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011723158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="DAB20506.1"
                     /translation="MFTGLIEEIGNIQEIKASDNSLYINIGCSKVLDGLKIGDSVAVN
                     GACQTVISMDAKGFTVFASSETLNVTTFKNFKRADKVNLERTLRLCDRLDGHLVSGHV
                     DGLAVVKNISKIGETTEFTFETTDAISKQIVKKGSVSIDGVSLTVADISNNIFKIAII
                     PHTMSETNLKYLKTGDSVNIETDMIAKYVEKYLLSNDNNSNTDSRIDINLLERNGFI"
     gene            complement(3656..4933)
                     /locus_tag="CPT85_09860"
                     /pseudo
     CDS             complement(3656..4933)
                     /locus_tag="CPT85_09860"
                     /inference="COORDINATES: protein motif:HMM:PF12831.5"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    4900..4908
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4917..>5849)
                     /locus_tag="CPT85_09865"
     CDS             complement(4917..>5849)
                     /locus_tag="CPT85_09865"
                     /inference="COORDINATES: protein motif:HMM:PF05430.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20505.1"
                     /translation="PLEFEKDFFTKKQLKILDICYGIGYNTKAILNIILKLKYNGNVT
                     IDALEYDKNLVLMSPFIKDGHEKKSPFVSYVLLSALIDDIYVNKDTVLNFIFSGKNKQ
                     FIAPFYRRLIKRFHYLRYQYNPPEQNKAFLHNTYYHCMSSRNKKSLNGLKLKNFTFNT
                     YFDDARATVQKLDYGYDIIFLDAFTPTKLPTLWSLDFFNELFRLLDKGGKLVTYSNSA
                     AIRNAMLNAGFCVGKLFDXXTKNCNLIQNKLDDYDLGLIKTNAGIYYKDKGLCCSVQE
                     ILYEHELRRKQLNLESSSHYIKTHKKECTNVTMQ"
     assembly_gap    5136..5141
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    5850..5893
                     /estimated_length=44
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1829 a         1093 c          995 g         2178 t
ORIGIN      
        1 tttattggca atttagagaa attatcaagg gtcaccgttt tgtatttgtc aaaattctta
       61 aattcaagca gtcttagggc gtttgcatcc aaaacagggt gctctgtgtt caatactttt
      121 ttaacggaat catagctgtg tccgcgtctt tttattgtat caagaagcct atcaaaaaga
      181 tggatttgtt ttttnncgtc taaaatctta tacgtgtctt tgttccagcc gtgaagcaag
      241 taaggataat aatccatatc aatgtgtttt ttctttgcaa tatcaattac gtcatccaga
      301 tattttatat ttttgtcatt aatctgcgtg ataaacttgt ttacttgatt tattttgtct
      361 ctgtcatcag cgtatctgtc cagcattttt tgaagttttt tatttaaaag agcctctgtg
      421 gcaagatgtc tgttttcggc tgtcagtttt agattagcaa taaagtcggg attttgagca
      481 tacctgggcg ttaagctgaa cctgtcagct gctgttttgt catattttaa attgtttaaa
      541 tctaaatgcc ctttgcctgt ttttaacggt gaagtttgta aaatgctttt aacaccgcac
      601 aattcagcgt agtgcctgac ttgattgatt ctaagcataa aattcttatt ttctcctaac
      661 tttaaaatat cctataagtc catacttata taaagtattt ttgcggagaa aaattgtcct
      721 aaatttataa aataggtctg tatgcttgag gataatagta atcttcttta gaaccaagcc
      781 ttctgtacat ttttaatgca ggatagttgt ctgtttctgt gctggcatta acctctgtga
      841 gctgatttat atattttgaa atcattttgg caacagaagc ttgaagcata gcttcgccaa
      901 gccctttagc gcagtgttca gagcccatgc ctattaaagg tatattcgca attcttcctg
      961 ctgtaatgtt ggtaaaacaa atgcctacag gctttttatt aaacaaaagt acgcttgtac
     1021 attcaggcaa aaatttaccg taaacacttg ttacaatctt atttaaaata tcagtacagc
     1081 cttcttttga agcaaatctc gggtcaaaaa gggcatcaga cgtattttta aatgctgtat
     1141 taataacgtt tataacttcg tcacaatatt ttgcatccca ttcaacaatt ttataccctt
     1201 ctggtagggc tttaggcgta tagtttttaa agagttgaat ggaatgtata tttgaaaact
     1261 caaaacgttc tacagcgagt cctacaagct taaaaccgta ttttgtgatt tcaggagtaa
     1321 actgttcctg tgcccctagc atcggataag taacaacttt ttctttgatc agctctttgt
     1381 tgagttccat aaacttgtcc atcaacattt tgcgtttatc attaagattt tcttcgccaa
     1441 tgcaatgaat catatttaat tcaacagcct cgcttatttc ggttgtataa accataaaag
     1501 ctgtcggaat ttcatcttct aaaagtacaa gacagttaat aagaccttgc tcaacactca
     1561 ggcaaaaatc ttcatactcg agaggttcaa gctcaaattt gtactcagaa tatgctttgt
     1621 ttttaaaatc gttgtaaacg cctttaaaaa tgtttttaat gtcttctgta tatttttgta
     1681 ctttataagt taatgtttct gccatttatt tttgctccat tttgtttatg tcaagcatgt
     1741 ggtgcatttt gttagcttta gtgcagagat atttgtagtt aaatttagta cattctgatt
     1801 caacctgtac tctttctgaa atttccagac catagccttc aagtcctaca attttttgag
     1861 ggttatttgt gattaaacgg aatcttttaa acccgaggtc aagaagtatt tgtgctccgt
     1921 caccatagtc tcttaagtca gaattaaatc caagagaaag atttgcctgt attgtatctt
     1981 cccccttatc ttgcagagca taagctttaa ttttgttaac aatgccaatt cctctgcctt
     2041 catggttcat aagatacaca acagcccctt tgccgtattc ttcaatcatt tgcattgagt
     2101 tttgcagctg gctgttgcaa tcgcatctca gactgtggaa agtatcaccg gtaaggcaaa
     2161 tgctgtgcat tctaacaagc ggaattttat ctgtaccatc gtcttttaat aatgcaacat
     2221 gctcctgccc agtgacagaa tgcctgtatc cgatgagttt gaacgtacca aatgctgttg
     2281 gcatagttac ttcagcttct cttaccataa gtctttcatt tttgagcctg tatgcaataa
     2341 gctgtgctac agttatgaat ttaatgttat gtttatctgc aaattttcta aggtcatctc
     2401 ttctagccat agaaccgtcc ggattaacga tttcacagca tacagcagca tctttaagac
     2461 ctgcaaattt acaaagatca acagaagctt ctgtgtggcc gactctttct aaaacaccgc
     2521 cttctttggc aataagcgga aagatatgcc cgggttgtct aagatctgat ggtatagtgt
     2581 tatcatctgc tataagttta agtgttacag aacggtcaaa cgcagagaca cctgttgtta
     2641 cgccgaattt ggggtcaccg tcaacgctct gtgtgaaggc tgtacctttt acatcagtgt
     2701 tgtcttttac cataaaatca agaccaagtt ttttagctct tgaaacgctt attggggcac
     2761 aaaggacgcc ttttgcctct gttatcataa agttgacatt ttccggtgtt gcaaattctg
     2821 cagcacaaat taaatcacct tcgttttcac gtgattcatc atctgcaact atgaccatac
     2881 cgccgttttt gattgtttca attgcttctt ctactgtgtc aaagcgaaac gtattgtctt
     2941 tattaaataa atcttttata ttttcgagta atgacattat ataaacccgt ttctttctaa
     3001 taaatttata tctattcgcg agtctgtatt gctattatta tcattcgata ataaatattt
     3061 ttcaacatat ttggcaatca tatctgtctc aatattaaca ctgtcaccag ttttgaggta
     3121 tttgagattt gtttctgaca tggtgtgagg aattattgca attttgaaaa tattgttaga
     3181 aatatcagct actgtaaggc ttacaccatc tatagaaact gagccttttt ttactatttg
     3241 tttggaaata gcatctgtgg tttcaaatgt aaattccgtt gtctctccaa ttttagaaat
     3301 gtttttaaca acagcaagtc cgtcaacgtg gccgctgaca agatgcccgt ccagtctgtc
     3361 acaaagccgc agtgttcttt caagatttac tttatctgca cgtttaaagt ttttaaatgt
     3421 ggtaacattc agtgtttctg atgaagcaaa aacagtaaaa cctttagcat ccattgatat
     3481 aacagtttga caggcaccat tgacggctac actgtctcca atttttaaac catcaagcac
     3541 tttcgaacac cctatattaa tatatagaga attatccgat gcttttattt cttgtatatt
     3601 tccaatttct tcaataagac ctgtgaacat accaacaatg tagcacaaaa taaacttata
     3661 aagaacttac caatctttta atatctcgag caactgcctc gcccattgaa aaacacgaag
     3721 tttgtattct cagtgcagcc tgtgcactaa aatctgctga tacattacgt cccgcaatgt
     3781 acaaattgtc atagtcagat gctctcaaac actcgattgg cagctcataa tccactgtta
     3841 catgttgaag tgtggaagca ttttttttgt aagagtgtat atctataggg taatctgcgt
     3901 gtaatactgg gtcttctata acatttccgc ttaaaatatc atcttttgtg aatatttttt
     3961 tgccttgtac ccgtctggac tctctaatac caatcatatc tgcaatatta gaaatatatg
     4021 atgcctcaaa acccggtaaa tagagcttta aaaaattata aattcgccaa atttgctttc
     4081 tagcttcgat taaagcttta gataaacaga tagggtcaag agggtctaca tccttgtcta
     4141 gcagtattct cggacaatta agggagactg ttgagggcat agcaggtact gtaaaaagct
     4201 gaaaatacga tgtatcagcc tcttttagca ccccatcttg tactgcttgt tgaaataacg
     4261 gccacaaagc ccacttttta tccttatccc atgtgcacgc agtagaaagg tgtatgttgc
     4321 catcaataac acaagatgtg gaaacatttc tatctttatc aaattccatt aaccagtcag
     4381 aaaatttttg cagattaaca ccggatacat gaaaacgcag cgtcattggc tgtcttgttt
     4441 cattattatt cagaatttta gtatttaaaa tttgagaaaa atttccatcg ccagttgagt
     4501 ctacataata taacgaatcg atatatagtg ataacatttt tgaggatatg cacaaagatt
     4561 ttatgcgatt attttctgta agagcatttt ttacttcaca atcgtataaa acatcacaac
     4621 ccgctttttc gagcatagaa tcaagcgcta attttgataa ttcggggtta aaccaaccgg
     4681 tattgccatc agtgtaggtt atttggccat tatacagttt taattcttga ataaagtcat
     4741 tataaaattc acaatttatg ttttgagtgt ttgatttcat tgccggaata acaagcgcag
     4801 aagtaattgt cccgccaagg tgaatatttt tttccactat taatgttttt aaaccgagct
     4861 ttgctccgat ataacctgct gcaacaccag ctgtaccgcn nnnnnnnnca tattttttat
     4921 tgcattgtga catttgtgca ctcctttttg tgagttttta tatagtggct tgaagattcc
     4981 aaatttagct gtttccttct tagttcatgt tcatacaata tttcttgtac agaacaacaa
     5041 agtcctttgt ctttataata aatgcccgca tttgttttta tcaaacccag atcataatca
     5101 tcaagtttat tttgtataag gttacaattt tttgtnnnnn ngtcaaataa ctttcctaca
     5161 caaaagccag catttaacat ggcgtttcta attgctgcgg aattggaata agttacaagc
     5221 ttaccgcctt tgtctaaaag tctgaaaagt tcattaaaaa aatccaaaga ccacaaagta
     5281 ggtagttttg tcggtgtaaa agcatctaaa aatataatgt catacccata atcaagcttt
     5341 tgcacagtgg ctcttgcatc gtcaaaatag gtattgaatg taaaattctt taatttaagg
     5401 ccattgaggc tctttttatt gcgcgacgac atacagtgat aataagtatt atgtaaaaag
     5461 gccttatttt gttcaggagg gttatattga tatcttaaat aatgaaatct tttaatcaaa
     5521 cgtctgtaga aaggagctat aaattgttta ttcttacctg aaaatatgaa atttaataca
     5581 gtatctttat taacgtaaat atcatctatc aatgcggaca acaatacata agaaacgaaa
     5641 ggagattttt tttcatggcc atctttaata aacggagaca tcagtacgag atttttgtca
     5701 tattcaagag cgtctattgt cacattacca ttgtatttga gtttgagaat tatatttaaa
     5761 attgctttgg tgttgtagcc aattccatag caaatatcga ggatttttaa ttgtttttta
     5821 gtaaaaaaat ctttttcaaa ttccagaggn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     5881 nnnnnnnnnn nnncattcac ttctttgttg tacaatccgc atgaaccatc tttggtgaag
     5941 agaaattcat aatcaatgtt tttgggtaag tcattattca taatacaatt ataaaattta
     6001 ttttgaattt agtataattt tttacaaaat gttatcgcta tgtatcgtat agatatataa
     6061 tgataaaaca actctgggtc actaaaatat tatcaatata tatcgattcg tactaattat
     6121 ttgttaaatt tataaattaa aaaaatatat tataca
//
LOCUS       DABS01000215           10044 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12187, whole genome shotgun sequence.
ACCESSION   DABS01000215 DABS01000000
VERSION     DABS01000215.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10044)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10044)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10044
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..596)
                     /locus_tag="CPT85_09870"
     CDS             complement(<1..596)
                     /locus_tag="CPT85_09870"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20482.1"
                     /translation="MKQNKNLHKITLLTVSALLVLTAPKAFSITLDELTDPMPPAYRL
                     GVSATPEKAYKVSDSEKKLQAKDANLDKTSEEIKNITYADLSLKKIAKEISDEGELTS
                     EDTLKDIQMLWIGAAQQSETVKFIVYKLSNPDEDKPKESIVKKIIQPISTVGSLAGIG
                     IGNPIAAISSIMGSSVLGSMSVDDKDLNYKFSKVNDAD"
     gene            complement(583..798)
                     /locus_tag="CPT85_09875"
     CDS             complement(583..798)
                     /locus_tag="CPT85_09875"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20483.1"
                     /translation="MYDDLLFEEFEQMRQARKYQMDLERLAGKKTVQSLNLYQYAFKN
                     ELFSQKLLNSKQPKPSDKQQEVKNETK"
     gene            complement(791..1441)
                     /locus_tag="CPT85_09880"
     CDS             complement(791..1441)
                     /locus_tag="CPT85_09880"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20484.1"
                     /translation="MKKIFWSLIIFACGMNLVLAEEIGLKNVQTQKVEYTPKIQKETK
                     ELTIDEDTALKGIVNLQQKKDLEDIDMLWKATVENNNIIKFAMKKLSVPPNQQRYHSS
                     ILAKSVSALVNGASFIPAMFGADYMIQSASYATGRLANNYLAKANNPKEIPLTDTELI
                     ELAGMIESLQDQIINSYYNYKMSLNQIKDTRQRLVLYNKXXXKRQPDGNSRIRCHV"
     assembly_gap    838..844
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1470..2321
                     /locus_tag="CPT85_09885"
     CDS             1470..2321
                     /locus_tag="CPT85_09885"
                     /inference="COORDINATES: protein motif:HMM:PF13228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20485.1"
                     /translation="MKKISKGYCKISLTCFCLKSEVFIMIEDILKEIANAYSKLDCVY
                     AVVLSGSRTSNQSDELSDYDIYVYTDKEIPVEFRTALAQKYSDEYEIDNRYFETGDEW
                     TLRESKIGLDFMFRXCINNVYNKHYASNGYTTCFLHNVYTSQILYDKNGWFLNLQNKI
                     TGAYPLKLKKNIIKRNLMLLSDKKGASYLEQIEFAVKRNAPVSVNHRIAAFLASYFDI
                     IFALNEVYHPGEKRMIKYAKKHCKILPENFEENINALFRVDDSDKLKILNEIVIQLKK
                     ILPLDIA"
     assembly_gap    1818..1820
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2400..2960
                     /locus_tag="CPT85_09890"
     CDS             2400..2960
                     /locus_tag="CPT85_09890"
                     /inference="COORDINATES: protein motif:HMM:PF00011.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20486.1"
                     /translation="MDEKKEFKECHCDEHKTEHWAKFALLLLAVFIACYLAVYYVMDQ
                     MRHAYYVPAAPIENIDRILNEQDKMFQKDFGMGVFPMHDRAMMMVKNPVETYKDDNAD
                     AYKMIINLKPFNNNPKNVDVNVQENKVSVNAVGEKSGRNSDRVYSFSQSFMLPEKIDL
                     TKVTKEKKGHNYVITMPIDNMDIDED"
     gene            complement(2957..3553)
                     /locus_tag="CPT85_09895"
     CDS             complement(2957..3553)
                     /locus_tag="CPT85_09895"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20487.1"
                     /translation="MDFSKGVLFDPGYSKYTLPFSQNIDAAYNMILSIKAPHQRKFKF
                     QMVYPQLLKLLEHTISFYLGCLLWAAFISNNFKDNPKEILDNHYIGQKIKEDEMLFEV
                     NYAIGYIEKLKKDCKYYLGKTCNLPDDWMQIMQLYKEFLMVNEFLVDAKSSADIKLPL
                     AIKEPSQDDLNKILEQIELVVKSGELKELFKVKKLIID"
     gene            3668..4672
                     /locus_tag="CPT85_09900"
     CDS             3668..4672
                     /locus_tag="CPT85_09900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013777500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyglutaryl-CoA dehydratase"
                     /protein_id="DAB20488.1"
                     /translation="MALNVYLGIDVGSVTTKLALVDESGKYVDSYMLRTSGKPVIAVQ
                     KGMQELAKQALCEYNIQGVGTTGSGRNLAGALVGADVIKNEITAHAVAASTYVPGVQT
                     ILEIGGQDSKIIILRDGIVTDFAMNTVCAAGTGSFLDQQANRLNVPIAQFGETALKST
                     NPARIAGRCGVFAESDLIHKQQLGYPVEDLLYGLCQALVRNYLSNLALGKELLPTVSF
                     QGGVATNSGMVKAFEEALGTKVVVPDNHQTMGAIGAALLAMENHQYTENPTKFKGWEV
                     GNMHFNSITNQCTGCSNNCEVITIVEGEMPDEHPKDIKDIKGNIIARWGGTCGRWDIS
                     "
     gene            4763..6199
                     /locus_tag="CPT85_09905"
     CDS             4763..6199
                     /locus_tag="CPT85_09905"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20489.1"
                     /translation="MNISGINLYSYKIHKSNYHSSASGSCSSFASFAANKPDTVSFGN
                     FKKVKCSNFVYDMRELENMNCACCGIKMLKTSDAHKFLNSKVYFPAYTALAKLEEDNF
                     RVKRTDSEYLSAYKYLKTYAAQHKNLTINDILAKDDVKSHRKRLSVDESNAFEQIREQ
                     CNLVSHSSRYLIAELEKLKPDFQEHEQKVYEELKKLSEIYPDDTFNTILNKPVIRKVY
                     LNSLRSKQIAVLDKLKPVIKDLPYRYMVPLEQASDNARKIFVKEDDNVIHKRKRVVSS
                     FYEIADKIPDVRVVEEIRDIIDQLPDSKNDVDAFMVRAAKKSSNAVMDILISRIRSTY
                     EHVIPHHRKDNNGPSEKTNYICLCGKCNVERQQLSYEKFVDVHPEMIQNTQKQIDKII
                     YFINKGLLYGYDNYPAAIKEGLSNESGGNEYKQGKIFVDISKLDLAQANINRQLRQQK
                     IVESQIEKSLAENYGIKCKNLKPRHKKN"
     gene            complement(6196..6684)
                     /locus_tag="CPT85_09910"
                     /pseudo
     CDS             complement(6196..6684)
                     /locus_tag="CPT85_09910"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6617..6853)
                     /locus_tag="CPT85_09915"
                     /pseudo
     CDS             complement(6617..6853)
                     /locus_tag="CPT85_09915"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    6643..6680
                     /estimated_length=38
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(6904..7854)
                     /locus_tag="CPT85_09920"
     CDS             complement(6904..7854)
                     /locus_tag="CPT85_09920"
                     /inference="COORDINATES: protein motif:HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20490.1"
                     /translation="MPRKLHWMHTKKCSXNPYDRDALVKQATLIQTHFPDNYDEAIDC
                     YTKLLEIEPENDKVYYELGHLYLQKNESLPAVNAFSMALEKDDENPFYHNSMAFALVQ
                     LEQYDDAIEHYQKAININPDPYWTSIVCQALGSVYLEIKNNPEAAIVLYQTAAVLNPE
                     CDESQLAIGDTYFSMEEYDNAIRAYCDAIKINPENAKAYCKCGMALWEKDYTEEAIVA
                     YHKAIDLNPDYAIAHNNLGVIYLDDIGNTHEAIALFEKAISENKSYTLAYFNLGRAYA
                     ITGENTKAAKNFQRALDLNVLTGELEEEDILNRLHKLFEV"
     gene            complement(7808..8596)
                     /locus_tag="CPT85_09925"
     CDS             complement(7808..8596)
                     /locus_tag="CPT85_09925"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20491.1"
                     /translation="MLEQHDMDKMGNTDNTDVLNKKEKERKENVANMLEKARVYHEKY
                     LLRNNTSDMESAVNYYIQAIKLNPQIPETYYRLACLMFENGQISLDSAIEQCKMAIDI
                     APENPNAHLYTGYFLKLANDFDEAEKEFKNAIKVSPLNSARPRLILATMLYQKINNVK
                     PSLVDFIRMVYYACSGCLTVLWDFASIKMLYKNISDDALGFMYKTYGHFLEKIKNSSL
                     AVATYDIAAENTGRDEYFYNRIGDICIKEHAPEIALDAYQKVLX"
     assembly_gap    7812..7813
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    8861..8869
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8961..9935
                     /locus_tag="CPT85_09930"
     CDS             8961..9935
                     /locus_tag="CPT85_09930"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20492.1"
                     /translation="MSVLKKNKARKIKLKQLKAELKKQEEKARQQLFHTHEEIVAKLM
                     FTDPNYLKKTSLSKEIKKLTDADMCLELLDYDGVRLTNSNKPRFVSNTNNILLGKIAK
                     GGKSIRRTEVLIERFKQIIAVQNQCCDASEVKALVNAILQTGEKTQLISFLKLLKKCA
                     QSDSYGKMALNMNVLQGITKAARKTEIPKEYAEIAEIIIKNPNKITMANDAAVNLSYF
                     KGKFDCIAELMTRKDYNAIVKSRSEAVVSAGFRSALKDGKLYEYKQIVFEPENKYFPY
                     MVQNLHKTRTPEEDAIFKQEISSKLLDKKFLPFLENYHLDKLHKSLGK"
BASE COUNT         3304 a         1624 c         1787 g         3270 t
ORIGIN      
        1 atatcagcgt cgttgacttt ggaaaatttg tagttcaaat ctttgtcgtc aacagacatt
       61 gagcctagca cactgctacc cataatagaa gaaattgccg caatggggtt acctatccca
      121 ataccggcca gagaaccgac tgtagaaatt ggttggataa tcttttttac aatactttct
      181 tttggtttgt cttcatcagg attggacaac ttgtatacaa taaattttac tgtttcactt
      241 tgctgtgctg caccaatcca caacatctgt atatctttca gcgtgtcttc agatgtaagc
      301 tcaccttcat cgctgatttc ttttgctatt ttttttaggc tcaaatcagc gtaagttata
      361 ttttttattt cttcacttgt cttatcaagg tttgcatctt ttgcttgcag ttttttttca
      421 ctgtctgata ctttatatgc tttttccgga gttgcgctca ctcccagacg atacgccggc
      481 ggcatcgggt ctgttagttc atcaagtgta atagaaaaag cttttggtgc tgtcagtact
      541 aatagcgctg atacagtcag cagcgttatc ttgtggaggt ttttattttg tttcattttt
      601 tacctcctgt tgtttatcag atggttttgg ttgtttagag ttcaacaatt tttgagaaaa
      661 aagctcgttt ttaaatgcat actggtataa attcaagctt tgaacagttt ttttgccggc
      721 aagcctttcc aaatccattt gatactttct tgcttgtctc atctgttcaa attcctcaaa
      781 aagcaaatca tcatacatgg cacctgatac gactatttcc atctggttgt cgcttttnnn
      841 nnnntttgtt gtataaaaca agtctttgtc ttgtatcttt aatctggtta agagacattt
      901 tgtagttgta ataggagttt attatctggt cttgcaaaga ttctatcatc cccgcaagct
      961 caataagctc tgtgtctgtc aaaggtattt ctttgggatt attagctttt gccagataat
     1021 tgttagcgag ccttcctgtt gcataagagg ctgactgaat catataatcc gcaccaaaca
     1081 ttgcaggaat aaatgaggct ccgtttacaa gcgctgatac tgattttgcc agaatagatg
     1141 agtgatatct ctgctggttt ggagggacgg aaagcttttt cattgcaaat ttgattatat
     1201 tattgttttc aactgttgct ttccaaagca tatcaatatc ttcaaggtct tttttctgtt
     1261 gaaggtttac tatccctttt agtgcagtat cttcatcaat tgtcagctct tttgtttctt
     1321 tttgtatttt gggcgtatat tccacttttt gagtttgcac atttttcagg ccaatttctt
     1381 cggccaaaac caaattcata ccgcatgcaa atattattaa tgaccaaaat atttttttca
     1441 tacatgtact ttatagcata taaatttgga tgaagaaaat ttctaaaggt tattgtaaaa
     1501 taagtttaac ctgtttttgt ttaaaaagtg aggtgtttat tatgatagaa gatattttaa
     1561 aagaaatagc aaatgcttat tccaaactcg attgtgtata tgcggttgtt ttgtcaggct
     1621 cacgtacatc aaatcagagt gatgaactat ctgattatga tatttatgtt tatacagata
     1681 aagaaatacc tgtagaattc cgtacagcac tggcccaaaa atattctgat gaatatgaaa
     1741 tcgacaacag gtattttgaa accggtgatg aatggactct tcgagaaagt aaaatagggc
     1801 tggattttat gtttagannn tgcataaata atgtctacaa taagcattac gcctcaaacg
     1861 gttatacaac ttgttttttg cataatgttt atacttcaca aattttatat gataaaaacg
     1921 gctggttttt aaatcttcaa aataaaatca caggcgcata tccgttaaag cttaagaaaa
     1981 atataataaa gagaaacctt atgcttctgt ctgataaaaa aggtgcatct taccttgagc
     2041 agatagagtt tgcagtaaaa agaaatgccc ctgtaagtgt aaaccacaga attgcagctt
     2101 ttttagcaag ctattttgat attatttttg cattaaatga ggtttatcac cccggtgaaa
     2161 aaagaatgat taaatatgcc aaaaaacatt gtaaaattct gcccgaaaat tttgaagaaa
     2221 atatcaatgc gcttttcagg gtggacgata gcgacaaatt gaaaatatta aatgaaatag
     2281 taatacagct gaaaaaaata ttgcctttgg atattgctta aatgtcgaat aaaaaaataa
     2341 taaatcccta ataaaataaa aacgatctga aaaaacaaac taaaataagg ggagattata
     2401 tggacgaaaa gaaagaattt aaagaatgtc attgcgatga gcacaaaact gagcactggg
     2461 ctaaatttgc gctgttgctt ttagctgttt ttattgcatg ttatctggca gtttattatg
     2521 taatggatca gatgaggcat gcatattatg tgccggctgc accaatagaa aatattgaca
     2581 gaattttgaa tgaacaggac aaaatgttcc aaaaagactt tggcatgggt gtattcccta
     2641 tgcatgacag agctatgatg atggtgaaaa atcctgttga aacatacaaa gatgataatg
     2701 cagatgctta taaaatgatt attaacctta agccctttaa caacaatcca aaaaatgttg
     2761 acgtaaacgt acaggaaaat aaagtaagcg taaatgctgt aggcgaaaaa tccggcagaa
     2821 attctgacag agtttattct ttctcacaga gctttatgtt gcctgaaaaa attgacctga
     2881 caaaagtaac aaaagaaaag aaaggtcata actacgtaat tacaatgcct attgataata
     2941 tggatattga tgaagactag tcaataataa gctttttaac cttaaagagc tctttcaatt
     3001 cacctgattt tacaactaat tctatttgtt caagaatttt attcaggtcg tcttgggagg
     3061 gctcttttat tgctaaagga agcttgatat cagcgctact ttttgcatct acaagaaatt
     3121 cattaaccat taagaattct ttgtaaagct gcattatctg catccagtca tcaggaaggt
     3181 tacaggtttt tccaagataa tacttacaat cttttttgag tttttctatg tagcctattg
     3241 cataatttac ctcaaacagc atttcatctt cttttatttt ttgtcctata taatggttgt
     3301 ccaaaatttc ttttgggttg tctttaaagt tgttggaaat aaatgctgcc cacaacaaac
     3361 atccaagata aaaagaaatt gtatgctcaa gcagtttgag aagttgcgga tataccatct
     3421 ggaatttaaa tttgcgttga tgaggtgctt ttattgacaa aatcatattg tatgccgcat
     3481 caatattttg agaaaaaggc agtgtgtatt tagaataccc ggggtcaaac aaaacgcctt
     3541 tagaaaaatc cataactcct cctgtcaaat tgtataaaat caattatagt ctctttccaa
     3601 ataaaaataa agtttgaact tatgtcttgt tttgtttatc attaaaataa atttaagaga
     3661 ggtaaatatg gcactaaacg tatatttagg gatagatgtg ggttctgtta ccacaaaact
     3721 tgcacttgtt gacgaatcag gcaaatatgt agacagttac atgttaagaa cttcgggtaa
     3781 accagtaatt gctgttcaaa aaggtatgca ggaattagca aaacaggcat tgtgtgaata
     3841 taatattcaa ggtgttggta caacaggcag cggaagaaac cttgccggtg ctcttgttgg
     3901 tgctgatgtt ataaaaaatg aaattacagc ccatgctgtt gctgccagta catatgttcc
     3961 aggtgttcaa actattttgg aaatcggcgg acaggacagt aaaattatta ttttaagaga
     4021 tggtattgtt accgactttg ctatgaacac tgtttgtgcg gcaggtacag gaagttttct
     4081 tgaccagcag gctaacagac ttaatgttcc tattgcacag tttggtgaaa ctgctctaaa
     4141 atctacaaac cctgctcgta ttgccggacg ttgcggtgtg tttgcagaaa gcgaccttat
     4201 ccacaaacag cagcttggtt accctgtaga agatttgctc tacgggcttt gtcaggcact
     4261 tgtaagaaat tacctgagca atcttgctct tggcaaagaa ttgcttccca ctgtgtcctt
     4321 ccagggcggt gttgctacta actcaggcat ggttaaagct tttgaagagg ctctcggaac
     4381 caaagttgtt gtgccagata accatcaaac tatgggtgct ataggtgcag ctttactcgc
     4441 aatggaaaat caccagtata ctgaaaaccc gacaaaattc aaaggttggg aagttggcaa
     4501 tatgcacttt aattcaataa caaaccagtg cacaggatgc tctaacaact gcgaagttat
     4561 tactattgtt gaaggtgaaa tgcctgacga acatcctaaa gatattaagg atataaaagg
     4621 aaacatcatt gccagatggg gcggtacctg tggcagatgg gatatttcat aaaactaaaa
     4681 aaagacactg ataaggtgtc tttcttttac ataaattaat aaaaggttaa aaaatttttg
     4741 tcaggagttt tatataaaca acatgaatat atccggtata aatttatatt cttataaaat
     4801 tcataaaagc aattatcaca gcagtgcctc tggttcttgc tcttcttttg cttcctttgc
     4861 cgcaaataaa cctgatactg tatcatttgg caattttaaa aaagtaaaat gttctaattt
     4921 tgtttatgat atgcgtgagc tagaaaatat gaattgtgcg tgctgcggta taaaaatgct
     4981 aaaaacaagt gatgcgcata aatttttaaa ttcaaaagta tattttcctg catatactgc
     5041 gttagctaaa ctggaagaag ataattttag agtaaaaaga accgacagcg aatacttatc
     5101 tgcttataag tatttaaaaa cttatgctgc tcagcataaa aatcttacaa taaatgatat
     5161 tctggcaaaa gacgatgtta agtctcatcg caaaagattg agtgttgatg aaagtaatgc
     5221 atttgagcaa ataagagaac aatgcaatct ggtttctcac agctcacgat atttgatagc
     5281 tgaacttgaa aaacttaaac ctgattttca ggaacacgaa caaaaagttt atgaagagct
     5341 taagaaactt tctgaaattt atccagatga tacgtttaat acaattttaa acaaaccggt
     5401 gataagaaaa gtttatttaa acagccttcg ctctaagcaa attgctgtgc ttgataaatt
     5461 aaaaccggta ataaaagatt taccttacag atatatggta cctcttgaac aagcaagtga
     5521 taatgcaaga aaaatctttg ttaaagaaga tgataatgtc atacacaaaa gaaaaagagt
     5581 tgtttcttct ttttatgaaa ttgctgataa aattccagat gtacgagttg ttgaggaaat
     5641 cagagatata attgaccagc ttccggattc aaaaaatgat gtggatgctt ttatggtgag
     5701 agctgcaaaa aaaagctcaa atgcagtaat ggatattctt atatcacgta taagaagtac
     5761 ctatgaacat gttattcctc atcacagaaa agacaataac gggccgagtg aaaaaacaaa
     5821 ttatatatgt ttgtgtggta aatgcaatgt tgagcgtcaa caattaagct atgaaaaatt
     5881 tgtagatgtt catcctgaaa tgatacaaaa tactcaaaaa caaatagata aaattatcta
     5941 ttttataaat aaagggttgt tatacggata tgataactat cctgctgcaa ttaaagaggg
     6001 attgagcaat gaatctggag gaaatgaata taaacaaggc aaaatatttg ttgatatcag
     6061 taaacttgat cttgctcagg caaatattaa cagacagctt cgtcagcaaa aaattgtaga
     6121 atctcaaatt gagaaatcac ttgctgaaaa ctacggtatc aagtgtaaaa atttgaagcc
     6181 aagacataag aaaaattaaa ttacattaat agtatttatt gtctcatttt gtatattttc
     6241 agctgcatct actacaaaac gcggcgtgta gtctttaagt atcagcattt tgttaatttc
     6301 tttactcaaa cctgcaaacg aaagtgcaat ttgcgaaggt tttttggaat ttctttcatg
     6361 gataaaacca agtacagtat caagaatctc taaaagcatt gctctgttga tatgtgcaaa
     6421 ctcaaaatct tcaaacactt ccatcaaaaa cggataagag tctgttgctt ttaatgcatt
     6481 tatggttttg attttttttc ttatatcatc gtctttaagc tgtgcaaaag ttattctaag
     6541 atagtacatc gagtatctgt aaatgttttt tattaccagc tctttatcct gaaacttcga
     6601 gattttttgg tagaaatcaa taaattcttt caaaagattt tcnnnnnnnn nnnnnnnnnn
     6661 nnnnnnnnnn nnnnnnnnnn tcaaacaaat ttttgtttaa cttttcagaa gcttcaagaa
     6721 atttgaactc catatcaagc cataacgtat tgaaaacatc tgacatgtta gagttttgca
     6781 aatcagagta tataaatttt ctgattttag atacttcact catgtctgta aatttgctgc
     6841 ataaattatt catattaaca gtttaaaata agcatgcaca aaaaaacaaa actattaaga
     6901 taattaaact tcgaataact tatgtaaacg attcaaaata tcttcttctt caagctcacc
     6961 ggttaaaaca tttaaatcca gtgcacgttg aaagtttttt gcagcttttg tgttttcacc
     7021 tgttattgca tatgctcttc ccaggttaaa ataagcaagc gtgtaacttt tgttttctga
     7081 aatggctttt tcaaatagag ctattgcctc atgcgtgttg ccaatgtcat caagataaat
     7141 tacaccaagg ttgttgtgtg caatggcata atctggattt aagtcaattg ctttgtgata
     7201 tgcaacaata gcttcttctg tgtagtcttt ttcccacagt gccatgccgc atttgcaata
     7261 agcttttgcg ttttctgggt tgatttttat tgcatcacaa tatgctctta ttgcattatc
     7321 atattcttcc attgaaaaat atgtatctcc tattgcaagc tgactttcgt cacactccgg
     7381 gtttagtact gccgctgttt gatatagtac tattgctgct tcggggttgt ttttaatctc
     7441 aagataaacc gacccgagtg cctgacatac aattgatgtc cagtacggat cagggttgat
     7501 gtttattgct ttttgataat gctcaattgc gtcatcatac tgctccagct gtacaagagc
     7561 aaaagccatg ctgttgtggt aaaaaggatt ttcgtcatct ttttccaaag ccattgaaaa
     7621 agcattaaca gcaggcagac tttcattttt ttgcagataa agatgtccca gctcatagta
     7681 tactttgtca ttttccggtt ctatttcaag cagttttgta tagcaatcaa tagcttcatc
     7741 gtaattgtca gggaaatgag tttgtatcaa agttgcctgt tttacaaggg catctctgtc
     7801 atagggatta gnngagcact ttttggtatg catccaatgc aatttccggg gcatgctctt
     7861 ttatacagat atctccgatt ctgttgtaaa aatattcgtc acggcctgtg ttttccgctg
     7921 caatatcata ggttgccaca gctagagagc tgtttttaat tttttctaaa aagtggccgt
     7981 aagttttgta cataaaacca agagcatcat ccgagatgtt cttgtatagc atttttattg
     8041 acgcaaaatc ccataatact gtcaaacatc ccgagcatgc ataataaacc atgcgaataa
     8101 aatctaccag ggaaggttta acgttattta ttttttgata aagcatggtt gccagtataa
     8161 gacgcgggcg tgcagagttt agcgggctta ctttgattgc atttttaaat tctttttctg
     8221 cttcatcaaa atcgttggca agctttaaga aatatcccgt ataaaggtga gcattagggt
     8281 tttcaggggc aatatcaatg gccattttgc actgttctat tgcgctgtcc agcgaaattt
     8341 gaccattttc aaacataagg catgcaagac gatagtatgt ttcaggtatt tgcgggttga
     8401 gtttaatagc ttgtatatag taatttacag cactttccat atcagaagtg ttgtttctta
     8461 aaagatattt ttcgtggtaa acccttgctt tttcaagcat atttgccacg ttttcttttc
     8521 tttccttctc tttcttgttc aaaacatcag tgttatcagt gttgcccatc ttatccatat
     8581 cgtgttgctc tagcatgcct acctcagtct catgtcttta aattcgtcgg attaagaaat
     8641 taaaaaattt aacttttttg aaagaaatcc tccttttata ccaaatttga agatttatga
     8701 agaatttgtt ggcagatagc aaataaatat ctttttgagt tatatataaa tataaataaa
     8761 gacggattgt gtatgattaa gctgttcaaa ttatttggtt tcggaaaaag tgttaaaaaa
     8821 gctgcaacgt tcaacagaac tgctgcattt gctgattacg nnnnnnnnng cacaatacaa
     8881 atctcctgcc gttgacatat gacccgaagg cgcatattcc gcggccttat acaaatcctg
     8941 agtttaaagc ttatttgagt ttgagtgtat taaaaaagaa taaagcaaga aaaattaagc
     9001 taaagcaact aaaagcagag ttaaaaaaac aggaagaaaa agcaagacaa cagctgtttc
     9061 atactcatga agaaattgtt gcaaagttaa tgtttactga ccccaattac ctgaaaaaaa
     9121 catctttaag taaagaaata aaaaaattaa cagatgcaga catgtgttta gagcttctgg
     9181 attatgacgg cgtgagatta acaaatagca acaagcccag gtttgtgagc aatacaaata
     9241 acattttgct tggcaaaatt gcaaaagggg gcaaatctat tagaagaaca gaagttctta
     9301 tagagaggtt taaacaaata attgccgtac aaaatcaatg ttgtgatgca tcggaagtaa
     9361 aggcgcttgt caatgcaata ttgcaaacag gtgaaaaaac tcaattaata agctttttaa
     9421 agttattaaa aaaatgcgcg cagtcagaca gctatggaaa aatggctctc aatatgaatg
     9481 ttttgcaagg cattacaaaa gcggccagaa aaactgaaat ccctaaagaa tacgctgaaa
     9541 ttgctgaaat aataattaaa aatcctaata aaattactat ggctaatgat gcggctgtta
     9601 atttatctta ttttaaaggt aaatttgatt gtattgcaga gttgatgaca cgtaaagatt
     9661 acaacgcaat tgttaagagc cgctccgagg ctgtggtttc agcaggtttt agaagtgcac
     9721 tcaaagacgg caaactctat gagtataaac aaatagtttt tgaaccggaa aataaatatt
     9781 tcccttatat ggtacaaaat ttgcataaaa caagaacacc cgaagaggac gcaattttta
     9841 aacaggaaat ttcaagcaag ctgcttgata aaaaattctt gcctttttta gaaaactacc
     9901 atctggataa actgcataag agtctcggaa aataaaaata gtactaaata tttgccataa
     9961 atttttcaca atgttattat attcaggcta tggcaaaggc taaaactact acaaaagaaa
    10021 aaactaaaaa agaaaaggcg ctgg
//
LOCUS       DABS01000216            4884 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12365, whole genome shotgun sequence.
ACCESSION   DABS01000216 DABS01000000
VERSION     DABS01000216.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 4884)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 4884)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4884
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            <1..720
                     /locus_tag="CPT85_09935"
     CDS             <1..720
                     /locus_tag="CPT85_09935"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20466.1"
                     /translation="HVYQGYLLKETIMGEGFSVVDTSQGKIVYRAKDGTTNSAFKLKE
                     KNGQIQIFAQNVDIMLPKNSATKLAITDDGSFFNAKKSKNVTVIDGAENDGKKYADEI
                     ILDGDELRYIAARKTDGKNPLWAKDSGGGDKIYVTNGNNNRVYAKSGNNVFVSGDTKH
                     TVVEAYQGTYVKDASVSTTVEAKASPHTKGKNPSSNIFVEGSDFTMVKTEKGTVVETN
                     NKPIIVTPQGDKLFDEYRKQF"
     gene            791..1864
                     /locus_tag="CPT85_09940"
     CDS             791..1864
                     /locus_tag="CPT85_09940"
                     /inference="COORDINATES: protein
                     motif:HMM:PF13181.4,HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20467.1"
                     /translation="MEIKNNQNKDIKEQLLEQITKNPADEKNYEELSKIYIAEQNYEE
                     ALGLYEALLNVNPLNAQALINAGSLNFYFRNIDKSIDYYSRAAEIESKSFSIYMNLGN
                     AYAELNNFEQAMKNYTKALELESNSAPLYNAIGLLYQDNKDFLSAIVYYDKAIALDDK
                     DPENYINKASAQMSMHMYREAVKSLKKAVSLDSKNLKALICMANCYSSLRDFENADKT
                     FEKCYKVDNRVYQVYVCHAISYSDANRIDMAISKYKEAIEVAPDMPNAYILLGNIYVD
                     RRMYLEALDCYKKASQIQPQDAKTYTFIGNTYFMLDDLTNAIYTYRSALKCNEESNEN
                     KLVYIEILQEYIKRKEADTQAVS"
     gene            1880..2299
                     /locus_tag="CPT85_09945"
     CDS             1880..2299
                     /locus_tag="CPT85_09945"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20468.1"
                     /translation="MAVPRYNSPSLFEKLVASASYIFPLVGFVFVIITALLKKDMKAF
                     LKYHIFQSIFIAFTLWIVVSGLGFLMKFVSYIPGVKNVVGIITFFLNTPLFYGFSIIT
                     FLYFLFVIYLIIGVLRGSDSYVPWISDVIKTNLRGQI"
     gene            2303..3546
                     /locus_tag="CPT85_09950"
                     /pseudo
     CDS             2303..3546
                     /locus_tag="CPT85_09950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003398326.1"
                     /note="catalyzes the formation of L-methionine and acetate
                     from O-acetyl-L-homoserine and methanethiol; frameshifted;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase"
     assembly_gap    2764..2769
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            3579..4092
                     /locus_tag="CPT85_09955"
                     /pseudo
     CDS             3579..4092
                     /locus_tag="CPT85_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009708278.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
     assembly_gap    3769..3775
                     /estimated_length=7
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(4095..>4884)
                     /locus_tag="CPT85_09960"
     CDS             complement(4095..>4884)
                     /locus_tag="CPT85_09960"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20469.1"
                     /translation="VCALALSLCIPCLQTSAAINGNIEKNGVGDYNQVIDSRTQSPVS
                     QADVSLPSKGYKTKTDNEGRFSLGAKIDAPTIMSVQKDGYKPFSLTVDGQSLSKPIVV
                     GIEKTNPHDIIIDKNMYHIGDDNYSENSANAAEFRIKAIGPFYTKSFKVGNLPPNEDA
                     YLVIGSVIGIDTKMARDMGQSKVTTTYASAPQIFFNGNMIAELNLNGDNQQIKIPRNL
                     IRPNADNQITVKAGKNLFQMAYIDYDDIELMNLFIETKSKLAND"
BASE COUNT         1566 a          830 c          987 g         1488 t
ORIGIN      
        1 catgtttatc aaggatattt attaaaggag acaattatgg gcgaaggctt ttcagtagta
       61 gacacatctc agggcaaaat agtatataga gcaaaagacg gcacaacaaa cagcgccttt
      121 aaattaaaag aaaaaaacgg acaaatccag atttttgcac agaatgtaga tattatgctg
      181 ccgaaaaatt ctgccacaaa gcttgctata acagatgacg gaagcttttt taacgctaaa
      241 aaatctaaaa acgtaactgt cattgacgga gccgaaaatg acggcaaaaa atatgcagat
      301 gaaataatac tcgacggtga tgagctcaga tacattgccg caagaaaaac tgacggaaaa
      361 aatcctttgt gggctaaaga ttcaggtggc ggagacaaaa tttatgtaac taacggtaac
      421 aacaatagag tttatgcaaa aagcggaaac aacgtatttg tttccggtga tacaaaacat
      481 actgttgtag aagcttatca gggaacatat gtaaaagatg caagcgtatc aactacagta
      541 gaggcaaaag cttctcctca tacaaagggt aaaaatcctt catcaaatat ttttgtagaa
      601 ggcagtgatt ttactatggt aaaaacagaa aaaggcactg ttgtagaaac aaacaacaag
      661 ccgattattg ttacacccca aggcgataaa ctgtttgatg aatacagaaa acaattttaa
      721 tatttgataa tcaaaacgta attttttcct attgttgctt caagtgtctc acttgtagta
      781 atatataggt atggaaataa aaaataatca aaataaagac atcaaagagc agcttcttga
      841 acaaataaca aagaaccctg ctgatgaaaa aaactatgaa gaattgagca aaatatatat
      901 tgctgaacaa aattatgaag aggcattagg gctatatgaa gctttgctca atgttaatcc
      961 tctaaacgca caggctctta tcaacgccgg cagtttaaat ttttatttca gaaatattga
     1021 taaatcgatt gattactatt caagagcagc tgaaatagaa tcaaagagtt tttctattta
     1081 tatgaacctc ggcaatgcat atgccgaatt gaacaatttt gaacaggcaa tgaaaaacta
     1141 tacaaaagcg ctggagctgg aatcaaacag tgcacctttg tataacgcaa tcggcctttt
     1201 gtatcaggat aacaaagatt ttttgagtgc aattgtctac tatgacaaag ctatagcact
     1261 ggatgataaa gaccctgaaa actatataaa caaagccagt gcacaaatgt ctatgcacat
     1321 gtacagagaa gctgtaaaat ccttgaaaaa agctgtttct cttgattcaa aaaatcttaa
     1381 ggctcttatt tgtatggcaa actgctattc atccttaaga gattttgaaa atgctgataa
     1441 gacatttgaa aaatgctaca aagtagataa cagagtctat caggtttatg tgtgccatgc
     1501 gatttcttac tctgatgcaa atagaataga catggcaatc agtaagtata aagaagcgat
     1561 agaagttgct cctgatatgc ccaatgctta tattttgctg ggtaatattt atgttgacag
     1621 aagaatgtat cttgaagctc ttgactgcta caaaaaagct tctcaaattc aacctcaaga
     1681 cgcaaaaaca tataccttca tcggcaatac atactttatg cttgatgatt taacaaatgc
     1741 gatttacact taccgcagtg cattgaaatg taatgaagaa tctaatgaaa acaaacttgt
     1801 ttacatagaa attttgcagg aatacataaa gagaaaagaa gctgatacac aggctgtatc
     1861 ttagtttcgg gagaagaaat tggcagttcc gagatataac tcaccatcac tttttgaaaa
     1921 attggttgcc agtgcatcgt atatttttcc gctggtcggt tttgtttttg taataattac
     1981 cgcacttttg aaaaaagata tgaaagcatt tttaaaatat cacatttttc agtccatttt
     2041 tattgcgttt actctatgga tagtagtgtc agggcttggt tttttgatga aatttgtgag
     2101 ctatatccct ggtgttaaaa atgtcgtggg gattattaca tttttcctca acacaccttt
     2161 gttctatggc ttttctataa taactttttt atacttttta tttgttattt atttgattat
     2221 cggagtatta agaggttcag acagttatgt gccgtggata tccgatgtta tcaaaactaa
     2281 cctgagaggg cagatttagt atatgaaatt tgatagtatt gcagtacagg gttttcatcg
     2341 agcaaaagat aacaggcatt gtatacccgt accgatttac cagacaacgg cttttgactt
     2401 tgataatgtg caatatgccg ctgatttgtt tgacctgaaa acttccggtg atatttatac
     2461 aagaatatca aaccccacaa cacaggtgct ggaagaacgt gtggctgctc ttgaaggcgg
     2521 cgtaggtgct ctggctgtgt cttccggaca agctgcatca ttgattgctg ttttaaatat
     2581 tgcaaaggcc ggtgatgatg ttgttgcgtc ttcaactttg tacggcggga cattcaatct
     2641 tttgcattca acattaagaa aattaggcat caacactatt tttgttgaag gcgaaacata
     2701 tgaagattac gaaaaggcaa taactccaaa aacaaaatgt ctttttacag aaatggtggg
     2761 caannnnnng aagctgctgc aaaagctgct cacaaacata gtatcccgct gattgtagac
     2821 aataccgtac cgtctcctta tctgtgcagt ccttttgaat ggggtgcgga tataattgtt
     2881 cattctttga caaaatatat ctccggccac ggaaactcaa tgggcggaat gattgtggat
     2941 tcaggcagtt ttgactggaa ggcttcgggc aagtttcctg accttgtcga gccggatgaa
     3001 agctatcacg gcttgagcta cacggaatcc tttggcaaag ctgcatttat tgtaaaagca
     3061 agaggccagc ttttaagaga ttttggttcc tgcatcagtc cttttaattc ttacctgacc
     3121 ttattagggc tggagacact gcatttgaga atgcaaagag tctctgatac ggctcttaag
     3181 gttgcacagc accttaaaaa tcatcctcaa atcgcatggg taaattatcc cggacttgag
     3241 gacagcgagt attatccgct agtaaaaaaa tatatgccta agggtgcgtc ttccataata
     3301 agctttggta taaagggcgg aagggatgcc ggtataaaat ttatagaaaa tgtaaaactt
     3361 ttaattcatg caacaaatat tggtgattcc cgctcgatta ttacttatcc ttgtttgacc
     3421 acgcacaggc agctaaacga tgagcagctc aaggcttgcg gtatttccga tgattttatg
     3481 cgtctgtctg ttggccttga ggatgttgat gatataataa atgatattga gcaggcaata
     3541 gaataattta tagataaaga aaaggaatat gaaaaaagat gcaaagttac gttcaatcaa
     3601 aggttagaga cattgttgat ttccctaaaa aaggaattgt tttcagagat attacaacag
     3661 ccgtaaaaga cccgaaggct ctaaaattta tgattgactt tttgacagag caatttgaag
     3721 ataaaaaaat tgattatgtt gcaggtgttg aatcaagagg ctttgtgtnn nnnnnacctc
     3781 ggtgcaggtt ttatcatggt aagaaaaccc ggcaaattgc ctgctgatgt aatttctcaa
     3841 gaatattcac ttgaatacgg tactgataaa attgaaatcc acgctgatgc tgttgaaccc
     3901 ggcaaaaatg tgcttgttat agacgatttg ctcgctacag gcggtactgt tgatgctgct
     3961 tgcaaacttc ttaaaaaagc aggtgcaaat gttgtgggtg cgggctttat cattgagctt
     4021 tccgaccttg gcggaagaga aaaactcaaa gatattgaag ttacttcaat gattcagtac
     4081 aaaggccttt aattttaatc attggccagc ttggattttg tttcgataaa cagattcata
     4141 agctcaatat cgtcataatc tatataagcc atttgaaaca ggttttttcc tgctttaacg
     4201 gttatctggt tgtctgcatt tggcctgatt aaattacgcg gtattttaat ctgctgattg
     4261 tctccgttaa ggttcaactc tgcaatcatg tttccgttaa aaaatatctg cggagcagaa
     4321 gcatatgttg tagtgacctt ggattgtccc atatctctgg ccatttttgt atctattcct
     4381 ataacagagc caatgacgag gtatgcgtct tcgtttggcg gaaggtttcc tactttaaaa
     4441 ctttttgtat aaaaaggtcc tatggcttta attctgaatt ctgctgcgtt ggcggaattt
     4501 tcagagtagt tgtcatcacc tatgtgatac atatttttgt cgataataat atcgtgggga
     4561 tttgtttttt caataccaac aacaatgggt tttgaaagag actggccgtc aactgtcaag
     4621 gaaaaaggct tgtatccgtc cttttgcaca gacatgatag ttggcgcatc tatttttgca
     4681 ccgagagaga atctgccttc gttgtcagtt tttgttttgt atccttttga tggcaagctt
     4741 acatcagcct gtgatacggg tgattgggtg cgtgagtcaa tgacttgatt gtagtctccc
     4801 actccgtttt tttctatgtt tccgtttatc gctgcgcttg tttgcaggca tggaatacat
     4861 aaagacaggg ccagagcaca aact
//
LOCUS       DABS01000217           16244 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_13342, whole genome shotgun sequence.
ACCESSION   DABS01000217 DABS01000000
VERSION     DABS01000217.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 16244)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 16244)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16244
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..1205)
                     /locus_tag="CPT85_09965"
     CDS             complement(<1..1205)
                     /locus_tag="CPT85_09965"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20434.1"
                     /translation="MLIQGSSLSNRTNMLVEHYVKLLNSGVSASRILVLTLNSFKKSL
                     FINQVKEKLSGSLKTIYIENPRIHTFSGLAYNTLTEFWPCVQNSIQTGEPCLIPNLTG
                     LEVSQFFFKQAVKEVGFKDYNSKVNLIHQLFRRYSLIVNNNLSEEDIKSRSAMLGESF
                     AGDAKKAIDIYKKNTAQYRAFDYIRQVAVFSYLYQNTDCFKDVDYLIVDDADEITTAE
                     LDFLLYLKPSLKEIFIGYDRHGTSRMGFLNADENTVPRIEKFFSEEKIIDVDEKFSTA
                     ASIESLSFSRRLEMVEKALEKIIELINSGVSPSDICVITPVIDNSLKFSVAEKLNSKN
                     INTQYFSGSEKLCSTPLVKMTLTLLNLSLGEMQDIYKIRSLISDMLKIPVKYCMNIVS
                     MYKQSGELR"
     gene            1397..2314
                     /locus_tag="CPT85_09970"
     CDS             1397..2314
                     /locus_tag="CPT85_09970"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20435.1"
                     /translation="MNGISGFYGYPNPYQVVANPTGAALTELNANFSREFGLSTPPIY
                     NLPLEVNMGFGMPQMGGMAGGAYMNPYMMMNMGMGMMNPYMMMSPTYRNYINMDYKDR
                     LAYDLDLRNAARENQFQEGKAAKNYAAANDGLTGAIRSACNSLQTVVIEGESDQIVHQ
                     FERIVNTLRRSSLYERFKQEYKDDPIGLEMALRNAACEQYQAVTGQDLKAMIQQNCDS
                     SVANGFWNTVTFGNSQKYSAEEIIAKMEGSEPPKSEKFKKTMGKIGGVTTAAGTGAAI
                     GAVIGFGVPGAIVGSIVGGIXYSRSHRSI"
     assembly_gap    2286..2287
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2442..3707
                     /gene="purD"
                     /locus_tag="CPT85_09975"
     CDS             2442..3707
                     /gene="purD"
                     /locus_tag="CPT85_09975"
                     /inference="COORDINATES: protein motif:HMM:TIGR00877"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="DAB20436.1"
                     /translation="MKILIVGSGAKEYSIAKLISKYENTSLVFVAPGNEAIAEFANCI
                     DIKADDTETLIEFAKANEIDLTIVASEKAIENDIAQKFNEAGLMVFAPTAEASRIASS
                     KSVSKKFMYKTKIPTSKFGIFDRENMAVDYARKSKYPLVIKTDNHLHGENVYVCDNFK
                     IAKRIIEDLFDSKEKKVILEDYIAGQEFSYYVITDGYNAMPIGSAVPYKGTLEGNGGC
                     ITSGLGAYSPFYMIDRSLESRIFKEIVYPALDELSKNGNQYIGILGIDIIIDRTGNLN
                     VIEFNPFFKEPDAQCILELLDENLTDVLKASINGSLVDIYSEIRQKPLYSASVVLSAG
                     NYPSEGKYGSTITGIEEAQEHSEVAHFNTIKNSDGDFLTAGGRTITVTTSASTLEQAA
                     KRAYESVALISFDSMKYRKDIGKTILIGC"
     gene            3709..3969
                     /locus_tag="CPT85_09980"
     CDS             3709..3969
                     /locus_tag="CPT85_09980"
                     /inference="COORDINATES: protein motif:HMM:PF04296.11"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF448 domain-containing protein"
                     /protein_id="DAB20437.1"
                     /translation="MDEQKIIRKCTACSKELSRDKLIKITVNNQKEVEIMPDSKFFGR
                     SAYICKDIDCIEKAFKKGRIFKILKIKQDETLKEKIRAVLEN"
     gene            4022..6490
                     /locus_tag="CPT85_09985"
     CDS             4022..6490
                     /locus_tag="CPT85_09985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018084385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="DAB20438.1"
                     /translation="MTDTIRVYDLAKELNLPNKDVIEMLDKKLGVKVKSHSSAVSELQ
                     AKKLKELVKEPKVEQAKKPKAFIVKKAKPKAEEAPKEEEKKTEPEVKPVEKVKLGKVE
                     PTLPAPAPRLKLGKIEPVLPQRPPKQERPARPQSKDAVKKDVKTDRKPELKKEGAPSQ
                     RPEKKPIQRHIIPQEIYDSKNSSKKKGGKKQEKSYRSKEEEQERISLEKANAQKHKKR
                     SHAEEAVEEIKSVVINQPLTVGELSEKINKASAEIVKFLMMQGILATVNQVIDVPTAK
                     KVCENFEIEVQEEDLEAFIEEEMQKEEEAKELAAIDPKLLKRRAPVISIMGHVDHGKT
                     TLLDSIRASKHKIVSTEVGGITQSIGAYTVYLNNKKIVFIDTPGHEAFTEMRARGAKA
                     TDIAILVVAADDGIMPQTIEAINHAKAAEVPIIVAVNKCDKPDANPDKIMQQLTEHGL
                     VPEEWGGDTVCVKVSALQGQGIDELLEYILLIAEVQDLKANPDAPASGVVIEANLDKG
                     KGPVATLLVQNGTLKTGQCVVVGNVCGKVRALLSDAGERVKKASPSTPVEILGLTEVP
                     QAGDKFEVVENEKAMRAIVAERKEKERNSRLEAMLPTHIRNEVVGEGDDGFQHLNLII
                     KANTNGSAEALSQAIGQFKSNEIIIKLIHVGVGDISEADVMLAAASNAIILGFTVKED
                     NNAEIAAAREGVTIKKFDIIYQILEDLEKTMLSLLQPEIKEVELGKAEVRQVFTVGKT
                     GRIAGCYVTEGKIFRNKTAKVVRNGEVIFTGTIDQLKRFKDDVKEVATGFECGISFAK
                     FNDIQEGDIIEVSTTEEVERQALV"
     gene            6493..6846
                     /locus_tag="CPT85_09990"
     CDS             6493..6846
                     /locus_tag="CPT85_09990"
                     /inference="COORDINATES: protein motif:HMM:PRK00521.2-4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-binding factor A"
                     /protein_id="DAB20439.1"
                     /translation="MSLRNERVRKTLMKEIADIIQKDVRDPRIAGVISITDIELAHDN
                     SFAKVYFSVFTTNKEAKKQTIEALEENVSKIRYEVGKRIRLRLTPELRFIPDDSLERG
                     TKVMDLIDKISKGEI"
     gene            6853..7722
                     /gene="truB"
                     /locus_tag="CPT85_09995"
     CDS             6853..7722
                     /gene="truB"
                     /locus_tag="CPT85_09995"
                     /inference="COORDINATES: protein motif:HMM:TIGR00431"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="DAB20440.1"
                     /translation="MFGFLNINKPKGMTSHDVVAMLRRALKIKQIGHTGTLDPMATGV
                     LPVAIGKASRLIEYLQENKGYTADVQFGKVSDTFDTEGAVKDYSNKKAAKEQIKEALN
                     NFRGKIEQIPPAHSAVHYKGKRLYELARQGIIPDDIPKRTVFVTKLELVEFDEESQSA
                     KLEIHCSKGTYIRSIINDLGLTIGTGAVMSGLVRTKSGLFELENAISPDCITDKAEAE
                     KYLINPVEVLSYKCYELAEIEYKKIQHGQSIATDDFEDNEYVCLTFNNELCAISQKQE
                     NSNTLVTKKVFIS"
     gene            7719..8594
                     /locus_tag="CPT85_10000"
     CDS             7719..8594
                     /locus_tag="CPT85_10000"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20441.1"
                     /translation="MKKIKFLTLLILTLMAAPAFSQSCTETASSMCPAVPKVNGPVSA
                     AFSKYTGMNAIIATTLESQVRKQLNEALTGDFKVDITPFGAKSMLEGKFKSISAHSDT
                     AYLDGLYMSNITAESLCGYNHFIYKNGQVYTNENFLLGFNADITSADLQKIISTPQYT
                     KLLNSLNFSVGNMSLFKVFDPKAEIKYDRLVVSIKVSSPLTLNEPKLISTSMGINVEN
                     GKILFTDIKTTPSMTSVNMNSILPVINKLNPLVINTAILNNPKSMIKINDINISGDKI
                     VIKGLVIVPKNYYNN"
     assembly_gap    8827..8843
                     /estimated_length=17
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            <8844..9231
                     /locus_tag="CPT85_10005"
     CDS             <8844..9231
                     /locus_tag="CPT85_10005"
                     /inference="COORDINATES: protein motif:HMM:PF10646.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20442.1"
                     /translation="KNDTGIFKKVKREVPQGQSKLKFALNQLMNGPSQYEKSVGVYSE
                     IPKNVKILGIVESSNKIIIDVSGNIQTGGGADSIYSRMKQFIKTALANSPKKPIYLYI
                     DGKQAEVLGGEGIMISQPLSENSLDG"
     gene            9224..9493
                     /locus_tag="CPT85_10010"
     CDS             9224..9493
                     /locus_tag="CPT85_10010"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20443.1"
                     /translation="MDKDLDYYLNLDWTLVEGTDLDFNGNPYHYIEIKEFPSFAFCAK
                     TREIALANYKNQLRHMLQIMLEDGERIPEPGEDDDDGIDWESLCP"
     assembly_gap    9571..9588
                     /estimated_length=18
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<9589..10469)
                     /locus_tag="CPT85_10015"
     CDS             complement(<9589..10469)
                     /locus_tag="CPT85_10015"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20444.1"
                     /translation="MSQNSFNVSSKTLKAASTKPHSHNIIPRDSDDSLNNYIRKISSI
                     AVLSPEEEKQIAQIAKEGSEKDSLKAKQQLVQENLKLVVNIARKTVQVSHLPMIDLIQ
                     EGNLGLMVAVEKFDYKLGYRFSTYAAWWIKQAIFKAISEQSHCVKIPVYIQETLSKFS
                     KVKSSLEQKYNTQVKNEDVAKTMNISAEKIDMFLGAYTKSISMDSAYELNSGSEVTLS
                     DILEDPNASVYADAEYENLKKDIETVVSKLKEREQAVVKMRFGLGEWSKTTLEEIGKL
                     YGVTKECIRQTEARALK"
     gene            10734..11174
                     /locus_tag="CPT85_10020"
     CDS             10734..11174
                     /locus_tag="CPT85_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014253479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-specific adenosine deaminase"
                     /protein_id="DAB20445.1"
                     /translation="MNNLFMQKAIDEALCAGNEIPVGAVIVKNGNIIAIEHNQKEALN
                     DVTAHAEILALRNASKELHCWRLNGCDLYVTLEPCPMCLWAIIQSRIDNLYFGSYDSL
                     YGAISTMPHMISFSNSKIKYKGGIMEQECDLILKNYFKRIREEK"
     gene            11171..11761
                     /locus_tag="CPT85_10025"
     CDS             11171..11761
                     /locus_tag="CPT85_10025"
                     /inference="COORDINATES: protein motif:HMM:PF09674.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20446.1"
                     /translation="MNTDTKKYMDLLVSTYETKDFIKDDPVQFPHRFKEKNDIEIAAF
                     IASIFAYGKREVFIAKLNTLFDIMQQKPYEFVMNFDENNHSLDNFDYRFSIGIDLVQI
                     VLILKALYTSNESLESLFAYGWKNTQTVQGTLQTVVDYFYSRVTMPVSKGFFHLLPNP
                     AKKSACKRLNMLLRWMXLEMEKLTLVSGNLCLSQNY"
     gene            11692..11934
                     /locus_tag="CPT85_10030"
     CDS             11692..11934
                     /locus_tag="CPT85_10030"
                     /inference="COORDINATES: protein motif:HMM:PF09674.8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20447.1"
                     /translation="MDGXRDGEVDLGIWKFMPKSELLIPLDVHVAKISRQLGLLQRNQ
                     NDYGAVIELMGKLKEFDPSDPVKYDFAMFGYGVNNN"
     assembly_gap    11700..11701
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(11931..12557)
                     /locus_tag="CPT85_10035"
     CDS             complement(11931..12557)
                     /locus_tag="CPT85_10035"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20448.1"
                     /translation="MNLRKAFTLAEVLITVTIIGIVAALTIPSFMSDTSQRSNAVALK
                     KAISALDQAVDMSRAESKFQPMPKCYISDVSTEGHQFDQCKDLFVYIKDMMQVSKYCE
                     SDPVSGGCMQEYNSDFSACEDWSKLENKKAFVTTDGMIYFEYSDEKGASNIGVDVNGS
                     KGPNKWGYDVFSLGLYGHKGVMQTYQPGGCEPVDLGGMTGYELLKEAG"
     gene            complement(12593..13531)
                     /locus_tag="CPT85_10040"
     CDS             complement(12593..13531)
                     /locus_tag="CPT85_10040"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20449.1"
                     /translation="MTVSQVLSSGYTEEGDEFFAEISSEVEGDKGVILPAGTIAHGCV
                     REIQSSKRLGRDGWIEVNFDYLITPDGREIPIQGKMSTKLNPVIGTTKNVAKGAGYTA
                     AGGVVGGFLALNVFGLPAAIASQGYTLAGGAALGGAVGLGMALYRKGKDVLISPGDEI
                     RVKVVHGIELPVFKKEALKQEEFVCEGLGLKITNIDFEEDPFGELNTITIALVITNLT
                     DKYFTGFDISLMNDLNASFYPSVFGDTSIMFSKIKPGDRTSGRISFSVDNIKRKHWLV
                     IYDRAQRKQIAKVSIDNAYRDIQDKKKAKKKRKKKD"
     assembly_gap    13631..13632
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(13803..14381)
                     /locus_tag="CPT85_10045"
     CDS             complement(13803..14381)
                     /locus_tag="CPT85_10045"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20450.1"
                     /translation="MKKLFILTVLLSCFVLQKADAYPVYSDELPQSYINSVKTNKSLG
                     NKQSLPVYDTQNMLEVNVYTPNRITLSNVLKKTAKGEYYTVQNYDINDRINFIVGEDV
                     YKNNKLYIKKGTTAVGIVREAQIGFGQFTAPDEIQISMFTTKDVNNNDVKLYGNIIQE
                     GKQTGLFQVILQEIPSLRASIPKNKLYTLYCK"
     gene            complement(14397..15074)
                     /locus_tag="CPT85_10050"
     CDS             complement(14397..15074)
                     /locus_tag="CPT85_10050"
                     /inference="COORDINATES: protein motif:HMM:PF01435.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20451.1"
                     /translation="MKRFIFCLLALAISINSVFADELRLDKEAKYQKQVMQIGYRVLN
                     ANQIDKRMTFFYVNSKDVNAVTALRSKQISVYKGLLPLLDSDDELAAVICHEIAHGLD
                     AHKGLWRRFTMAGSSKSYEFKADKKGVDLMVNAGYNPIAMIVILNKITAEPSWFERYP
                     SHPGGSERLLTIYSYIYSKYPEYLVDNDYKNNLYYQNFLLTTKKQRAGIRERYKDKNI
                     IPVSDKK"
     gene            complement(15145..15441)
                     /locus_tag="CPT85_10055"
     CDS             complement(15145..15441)
                     /locus_tag="CPT85_10055"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20452.1"
                     /translation="MIEKDTIVYAKIGEVSPRAMGGAPAEMTIEGFEMYDKKGKLIPL
                     DGEIASSGYSLSFWIGLAELATTPFLIGLAVPLLRLLPGGQAVVTPRKNYVVYY"
     gene            complement(15495..15944)
                     /locus_tag="CPT85_10060"
     CDS             complement(15495..15944)
                     /locus_tag="CPT85_10060"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20453.1"
                     /translation="MNILLKKITTIFLLTTIAFGACNINAYAKNTTKSKQNTMLKVGI
                     KKDVKQQVPKRKEFKMPVIEDELEKELASSQNIKKCRHKYKREIMTDEPVVISDENKK
                     FKRSDYQRKVRTEEGVAVILKPVNKIRTKNKHIKLVDGQNSDKXFPT"
     assembly_gap    15508..15509
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(15941..16228)
                     /locus_tag="CPT85_10065"
     CDS             complement(15941..16228)
                     /locus_tag="CPT85_10065"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20454.1"
                     /translation="MVKAGYDPVALINILNKTSKEEKWFEYNIFHHNGTERMKNIYQY
                     IYEKYPVYLAENKYIETDYYQNFLRLTKNDRKKVRNIQEQKIKKQGSKTTS"
BASE COUNT         5613 a         2842 c         2874 g         4872 t
ORIGIN      
        1 tctctaagct ctcccgattg tttatacatg cttacaatat tcatacaata tttaacaggt
       61 attttgagca tatctgatat caatgaacgt attttataaa tatcttgcat ttctcccaga
      121 gaaaggttta gcagagtcag ggtcatttta actaacggtg tagagcaaag tttttcactg
      181 ccggaaaaat actgagtgtt gatgtttttt gaattgagtt tttcagccac actaaacttt
      241 aaagaattat caataacagg tgtgataaca caaatatcag acggactaac accggaattt
      301 atcaactcaa ttattttttc cagtgctttt tctaccattt caagacgtct tgaaaaactc
      361 aaagattcga ttgatgcagc agtagagaat ttttcatcaa catcaattat tttttcttca
      421 ctgaaaaact tttctatcct tggcacggta ttttcatctg cattcaaaaa acccatccta
      481 gaggtgccat gcctgtcata tcctataaaa atttccttta aagaaggttt taaatacaat
      541 aaaaaatcca actctgcagt tgtaatttca tcagcatcat caactattaa ataatcaaca
      601 tctttaaaac aatcggtatt ttgataaaga taagaaaata ccgcaacctg tcttatatag
      661 tcaaaagctc tgtattgagc agtgtttttt ttatatatat cgattgcttt ttttgcgtca
      721 ccggcaaatg actcaccaag cattgccgaa cggcttttaa tatcttcttc ggaaagattg
      781 ttattcacaa tcaaagaata acgtctaaaa agctgatgaa tcaggttcac tttagaattg
      841 taatctttaa aaccaacctc tttaacagcc tgtttaaaaa agaactgaga cacctcaagg
      901 ccagtaaggt ttggaataag acagggctca cctgtttgta tagaattttg tacacagggc
      961 caaaattccg ttaaagtatt ataagctaga cctgaaaaag tatgaatgcg gggattttct
     1021 atatatatag tttttagact gccagaaagt ttttctttaa cctgatttat aaaaaggctt
     1081 tttttaaagg agttgagcgt cagaacaaga attctggatg cgcttacacc cgaatttaat
     1141 aattttacat aatgctcaac gagcatattt gttctgtttg acaaagaact gccttgtata
     1201 agcatatttc actccccaag aatattttat cattgaaata aaaaacagtt cgctcaaatt
     1261 tttgttaaca aatgttaagc aaattttcaa ttcaaagcaa ttttgcatca gcgattgttt
     1321 ttatatatgt aaggttagat aaattaggtt atatatccaa aagcaaagct taaggataac
     1381 aatttggagg ttggttatga acggaatatc aggattctac ggttatccaa acccgtatca
     1441 ggtggttgca aaccccacgg gcgcggcact gacagaatta aatgcaaact tttcaaggga
     1501 gtttggtctg agcacacccc ctatttataa cttacctctg gaggtaaaca tgggctttgg
     1561 tatgccacaa atgggaggaa tggcaggcgg tgcttatatg aacccatata tgatgatgaa
     1621 tatgggaatg ggtatgatga acccttacat gatgatgtct ccaacttaca gaaactacat
     1681 caacatggat tacaaagacc gtttagccta tgatcttgac cttagaaatg cagccagaga
     1741 aaaccaattc caagaaggta aagcagcgaa aaactacgca gcagcaaatg atggattaac
     1801 aggtgcgata agaagtgctt gtaactcatt acagactgtt gttattgaag gtgaatcaga
     1861 tcagattgtt caccagtttg aaagaattgt taacacatta agacgttctt cattgtatga
     1921 aagattcaaa caagaatata aagatgatcc tattggtctt gaaatggcat tgagaaatgc
     1981 agcatgtgaa caatatcaag cagtaacagg acaagactta aaagcaatga ttcaacaaaa
     2041 ttgcgacagc tctgtagcaa acggattctg gaatacagtt acattcggca actctcaaaa
     2101 atactcagct gaagaaatta tagcaaaaat ggaaggttct gaacctccaa aaagtgaaaa
     2161 attcaaaaag acaatgggta aaatcggcgg tgtaacaaca gcagccggta caggtgcagc
     2221 aataggcgca gtgataggat tcggcgttcc cggtgcaatt gtcggttcta ttgtaggcgg
     2281 tatagnntat agtaggtctc atcggagcat ttaacgcata atattaacca actatcatat
     2341 aactaacccc caaaaagctt ctgtttttat aacagaagct tttttcaata tcattttaca
     2401 tgtagtataa tgattaaaca gaagaaaagg taaattgatt tatgaaaatt ttaatagtcg
     2461 gttcaggcgc aaaagaatac tctattgcaa aactaatatc taaatatgaa aacacctctc
     2521 ttgtttttgt tgctccgggc aatgaagcta ttgcagagtt tgcaaactgt attgatataa
     2581 aagctgatga cacggaaact cttattgagt ttgcaaaagc taacgaaata gatttaacaa
     2641 ttgtcgcatc agaaaaagct atagaaaacg atatagcaca aaaatttaac gaagcagggt
     2701 tgatggtgtt tgctccgaca gcagaagcat ctagaatagc ttcgagcaag tctgttagca
     2761 aaaaattcat gtacaaaacc aaaatcccca cctcaaaatt tggtatcttt gacagagaaa
     2821 atatggctgt ggattatgca agaaaatcaa aatatccgct tgttataaaa accgacaatc
     2881 atttacacgg agagaacgtg tatgtgtgcg ataattttaa aattgcaaaa agaatcatag
     2941 aagatctttt tgacagcaag gaaaaaaagg taattcttga agattacatt gcaggacaag
     3001 agttttctta ctatgtaatt acagacggat acaatgcaat gccaattggt tcagccgtac
     3061 catacaaagg aacactggaa ggtaacggcg gttgtataac atcagggctt ggagcatatt
     3121 ctccttttta tatgatagac agaagccttg agagcagaat atttaaagaa atagtatacc
     3181 cagcacttga cgaattatcc aaaaacggaa atcagtatat aggcattctt ggaatagata
     3241 ttattattga cagaacaggc aacttaaatg tcattgagtt taatcccttt ttcaaagagc
     3301 ctgatgcaca atgcatactt gaactgcttg atgaaaatct tactgatgtg ttaaaagcat
     3361 caataaacgg ctcacttgtt gatatttatt cagaaataag acaaaagcct ctttacagtg
     3421 catcagttgt actgagtgca ggcaactatc cttccgaagg taaatacgga agcacaataa
     3481 ccggtattga agaagcgcaa gagcacagcg aggttgctca ctttaataca ataaaaaatt
     3541 ctgacggaga ctttttaacc gcaggaggca gaacaataac cgtcacaaca agcgcttcta
     3601 cattggaaca agcagctaaa agagcatatg aaagtgttgc tttaattagc tttgattcaa
     3661 tgaaatacag aaaagatata ggaaaaacaa tacttatagg ctgctaaaat ggatgaacaa
     3721 aaaataataa gaaaatgtac agcctgttct aaagaactaa gcagagacaa gttaataaaa
     3781 ataacggtca ataaccaaaa agaagtggaa ataatgccgg acagtaagtt tttcggacgt
     3841 tctgcttata tttgcaaaga tatagactgc atagaaaaag cctttaaaaa aggcagaatt
     3901 tttaaaattc tcaaaataaa gcaggatgaa acattaaaag aaaaaatcag ggctgtactt
     3961 gagaattaga ttgtgttaaa aatatagtaa ggcaatataa atttggagaa atatacatat
     4021 aatgacagat accatcagag tttatgattt agcaaaagaa cttaacttac ccaacaaaga
     4081 cgtaattgaa atgttggaca aaaaacttgg cgttaaagtt aagtctcatt caagtgcagt
     4141 ctccgaatta caggctaaaa aattaaaaga attagtgaaa gagccaaagg ttgaacaagc
     4201 taaaaaaccc aaggctttta ttgtaaaaaa agctaaaccc aaagcagaag aagctcctaa
     4261 agaagaagag aaaaaaactg aacccgaagt aaaaccggta gaaaaagtaa aactcggaaa
     4321 agttgaacct acgcttcctg ctcctgcacc aagacttaaa cttggaaaaa tagaacctgt
     4381 attgccgcaa agacctccaa aacaggaaag acctgcaaga ccgcaatcaa aagatgcagt
     4441 aaaaaaagat gtaaaaacag atagaaaacc tgagcttaaa aaagaaggtg ctccatctca
     4501 aagacctgag aaaaagccaa ttcaacgtca tattattcct caggaaattt atgattctaa
     4561 aaactcttcc aagaaaaaag gcggtaaaaa acaagaaaaa tcttaccgtt caaaagaaga
     4621 agaacaagaa agaatcagcc tggaaaaagc taatgctcaa aagcacaaaa aaagatcaca
     4681 tgctgaagaa gctgttgaag aaataaaaag cgttgtaata aaccagcctt tgacagtagg
     4741 agaattgtcc gaaaaaatca acaaagcatc agcagaaatt gttaaattcc taatgatgca
     4801 aggtattctt gcaacagtta accaggtaat tgatgtacct acagcaaaaa aagtttgcga
     4861 aaattttgaa attgaagttc aagaagaaga ccttgaagca tttatagaag aagaaatgca
     4921 aaaagaagag gaagcaaaag agcttgcagc tattgacccg aaacttttaa aaagaagagc
     4981 accggtcatc agtatcatgg gtcacgttga ccatggtaaa acaacacttc ttgattcaat
     5041 ccgcgcatca aaacacaaaa ttgtatcaac tgaagttggc ggcataacac agtctattgg
     5101 tgcatataca gtctatttaa acaacaagaa aattgtattc attgacacac cgggccacga
     5161 agcttttaca gaaatgagag caagaggtgc aaaggctaca gacatcgcca ttcttgttgt
     5221 tgcagcagac gatggtataa tgccccagac aattgaagca atcaaccatg ccaaagcagc
     5281 agaagtacct attattgttg cagtaaacaa atgcgacaaa cctgatgcaa acccagataa
     5341 aattatgcag cagctaacag aacacggtct agttcctgaa gaatggggcg gagacactgt
     5401 gtgtgtaaaa gtcagtgccc tacaaggaca aggtattgat gagctgcttg aatacatact
     5461 attaattgca gaggttcaag atttaaaagc aaacccagac gcaccagcat ccggtgttgt
     5521 tattgaagca aaccttgata aaggaaaagg ccctgttgca acactgcttg ttcaaaacgg
     5581 tacattaaaa accggccagt gtgtagttgt gggcaatgtt tgcggcaaag ttagagcact
     5641 gttatcagat gcaggtgaaa gagtaaaaaa agcttcaccg tctacacctg tagagattct
     5701 tggtcttact gaagttccgc aggcaggcga caagtttgaa gttgttgaaa acgaaaaagc
     5761 aatgagagct attgttgcag aacgtaagga aaaagaaaga aactcacgtc ttgaagcaat
     5821 gctgccaact catatcagaa atgaagttgt tggcgaagga gatgacggat tccaacacct
     5881 taaccttatt attaaagcaa acacaaacgg ttctgctgag gctctgtctc aagctattgg
     5941 acagtttaag tctaatgaaa taattataaa actcattcac gtaggcgtgg gtgatatttc
     6001 agaagctgat gttatgctcg cagcagcaag taacgcaatt attctcggct ttactgtaaa
     6061 agaagataac aatgctgaaa ttgcggcagc cagagaaggt gttactatca agaaatttga
     6121 tatcatttac caaatacttg aagaccttga aaaaactatg ctaagcctgc tgcaacctga
     6181 aattaaagaa gttgagctcg gtaaagcaga ggtaagacag gtatttactg tcggaaaaac
     6241 aggcagaatt gccggatgtt atgttacaga aggtaagata ttcagaaata aaacagcaaa
     6301 agttgtcaga aacggtgagg ttatattcac agggacaatt gaccagctta aacgttttaa
     6361 agatgatgtt aaagaagttg ctacaggatt tgaatgcggt atatcgtttg ccaagttcaa
     6421 tgacattcaa gaaggcgata taattgaagt atcaacaact gaagaagtag aaagacaggc
     6481 tctggtttaa ttatgtcatt aagaaacgaa cgtgttagaa aaactttgat gaaagaaatt
     6541 gctgacataa tacaaaaaga tgtcagagat ccccgtattg caggtgtaat ttctattaca
     6601 gatattgagc tcgctcatga caactcattt gcaaaggtat atttttctgt tttcacaaca
     6661 aataaggaag caaaaaaaca aaccattgaa gctctggaag aaaatgtttc gaaaattcgc
     6721 tatgaagtag gtaaaagaat cagacttcgt cttacaccgg aattgcgttt tatacctgat
     6781 gattcgctcg agagaggaac aaaggttatg gatttgatag ataaaatctc caaaggagaa
     6841 atataacccg ctatgttcgg ctttttgaat ataaacaaac ccaaaggcat gacctctcat
     6901 gatgttgttg ccatgttaag acgtgcgtta aaaataaaac aaatcggtca tacaggtaca
     6961 cttgacccta tggcaacagg tgtattgcca gtagcaatag gaaaagcatc aagacttata
     7021 gaatatttgc aagaaaataa aggatatact gccgacgtac aatttggaaa agtttctgat
     7081 acctttgaca cagaaggcgc tgtgaaagat tatagcaata aaaaagctgc gaaagagcaa
     7141 ataaaagaag ctttaaataa ttttagaggc aagattgaac aaattccgcc agcgcattct
     7201 gcagtacatt ataaaggcaa aaggctttat gagctagcaa gacagggcat aatacctgat
     7261 gatattccca aaaggactgt atttgtaaca aaacttgagc ttgtggagtt tgatgaagaa
     7321 tctcaatctg ctaagcttga aatacattgc tcaaaaggta catatatccg ctcaataata
     7381 aatgatttag ggcttactat cggcacaggc gcagtaatga gcggacttgt gagaacaaaa
     7441 tcaggtttgt ttgaattaga aaatgcaatt tcccctgatt gtataacaga taaagccgaa
     7501 gccgaaaaat atttgataaa tcccgttgaa gttctatcat ataaatgtta tgagcttgca
     7561 gagatagaat acaaaaaaat acaacacggt caaagcattg caacagatga ttttgaagat
     7621 aatgaatacg tatgcttaac ttttaacaat gagctgtgcg ccatatctca aaaacaagaa
     7681 aactctaaca cactggtaac aaagaaggtt tttatatcat gaaaaagata aagtttttaa
     7741 cattattaat actcacacta atggcagcac ctgctttttc acaaagctgc actgaaaccg
     7801 catcttcaat gtgtccggct gttccaaaag tcaacggccc tgtctctgct gcttttagta
     7861 aatatacagg aatgaatgca ataattgcaa caacactgga atcgcaggta agaaagcaat
     7921 tgaacgaagc tttaacaggt gattttaaag tagacattac gccttttggt gcaaaaagca
     7981 tgttggaggg taaatttaag agcatcagcg cgcactctga taccgcatat ttagatggtt
     8041 tatatatgtc aaatatcaca gcagaatcgc tgtgcggata caatcatttc atctacaaaa
     8101 acggacaagt ttacacaaac gaaaattttc ttctgggatt taatgctgac ataacatcag
     8161 ctgatttaca aaaaattatt tccacaccac aatatacaaa gcttctcaat tctttaaatt
     8221 ttagtgtggg caacatgtca ttgttcaagg tctttgaccc caaagcagaa ataaaatatg
     8281 acagactggt tgtatctata aaagtatctt cacctttaac attaaatgag ccaaagctta
     8341 tttctacaag catggggata aatgtggaaa acggcaagat tctttttaca gatataaaaa
     8401 caactccatc aatgacatct gttaacatga attccatttt gcctgttata aacaagctaa
     8461 acccgcttgt cataaacaca gcaatactta acaaccccaa aagtatgata aaaataaatg
     8521 atattaatat atccggagac aaaattgtta taaaagggct ggttattgtg cctaaaaact
     8581 attataataa ttgatatgtt tacgacaaat atacggggta acttatggga ttctggtcaa
     8641 aactggtaat attagcactt gcggctctgg cattctttta tgtaaaagta aattttttcg
     8701 atactccgca tgctaaagtt gaaaaaaaac ttgttgtaga agaacaggtt gcagaacctg
     8761 ttaaaaaagt tgagccaaca gaaaataaaa aacaagaaga agaaaagaaa gtaacaaaga
     8821 catatgnnnn nnnnnnnnnn nnntaaaaat gacacaggaa tatttaaaaa agtaaaaaga
     8881 gaagtccctc aaggccaatc aaaacttaaa tttgctctta atcagcttat gaacggccct
     8941 tctcaatatg aaaaaagtgt tggtgtttat tctgaaatcc ctaaaaatgt aaaaattctt
     9001 ggtatagtcg aaagcagcaa caaaattatt attgatgtat ccggcaatat ccagacagga
     9061 ggcggtgcag acagcatcta cagcaggatg aaacaattta taaaaacagc acttgctaac
     9121 agccctaaaa aacctattta cctctacatt gacggaaaac aagcagaagt actcggaggt
     9181 gaaggtatta tgatttcaca acctttaagc gagaactctc ttgatggata aagatttaga
     9241 ttattacctt aatttggatt ggacgcttgt tgaaggaaca gatttagact tcaacggcaa
     9301 cccttatcat tacattgaaa taaaagaatt tccaagtttt gcattctgtg ccaaaacaag
     9361 agaaatagca ctggcaaatt acaaaaatca attgcgccac atgctccaaa ttatgctaga
     9421 agacggagaa agaataccgg aacccggaga agatgatgat gacgggattg attgggaaag
     9481 tttatgccct taatatgggc aaaataaaaa cgcactgctt tgtacagtgc gcaatattct
     9541 gttgtagtga ttaatacata tatgctgtaa nnnnnnnnnn nnnnnnnntt tttaagtgct
     9601 cttgcttcag tttgtcttat acattctttt gtaacaccat aaagcttgcc tatttcttcc
     9661 agagttgtct tgctccactc accgagtcca aatctcattt ttacaacagc ttgttctctt
     9721 tcttttaact ttgacacaac tgtttcaata tcttttttca gattttcata ctcagcatca
     9781 gcatacacag aagcattggg gtcttcaaga atatcagaca gggtaacttc gcttccggaa
     9841 ttcagctcat atgccgaatc cattgagata gattttgtgt atgcacctaa aaacatatca
     9901 attttttctg cagaaatgtt catagttttt gccacatctt catttttaac ttgtgtgtta
     9961 tatttttgtt cgagtgaaga tttaactttg gaaaatttag ataaagtttc ttgaatataa
    10021 acaggtatct taacacaatg agattgttcg gatattgctt taaagatagc ttgcttaatc
    10081 caccatgcag cataggttga aaaacgatag cctagtttgt aatcaaattt ttctacagca
    10141 accatcagtc ccagattgcc ttcttggatc aaatctatca taggcagatg agaaacctga
    10201 acagtttttc ttgctatgtt aacaacaagt tttaaatttt cttgtacaag ctgctgttta
    10261 gctttaagag aatctttttc gctgccttct ttagcaattt gtgcaatttg tttttcttct
    10321 tccggactta atactgcaat ggaagaaatt tttctgatgt aattgtttag agaatcatcg
    10381 ctgtcacggg ggatgatgtt gtgagaatgg ggctttgttg aggctgcttt taaagtttta
    10441 gatgagacat tgaaagaatt ttgagacata cacttactcc taatttatat ttaatatcct
    10501 aatttacttg tttttgcgca ggctaattgc acagtacaga agaatctatc tgccgtgcat
    10561 ttgcggatac atttagaaaa agagattaaa actgaaccta aaaaatactt gcttgtgtat
    10621 atacttaata tatcacttag tatatacaaa tgcaagcttt ttattacgaa atattacaaa
    10681 aacgttaaaa aaaaatgaaa ttttgtaata ttttgtaata tattataaaa catatgaaca
    10741 acctttttat gcaaaaagcc atagatgaag cgctttgcgc aggtaatgaa atacctgttg
    10801 gagctgtaat agtaaaaaat ggtaatataa ttgccattga gcacaatcaa aaagaagcct
    10861 tgaatgatgt aaccgcacat gccgagattc ttgcacttag aaatgcctct aaagagctcc
    10921 attgctggag actaaacgga tgtgatttat atgtcacact ggagccctgt cctatgtgct
    10981 tgtgggcaat aatacaatca cgtattgata atctctattt tggttcatat gattcgcttt
    11041 acggcgcaat cagcacaatg ccgcacatga tttcattttc taattcgaaa ataaaatata
    11101 aagggggtat aatggagcaa gagtgtgatt taattttgaa aaattacttt aaaaggataa
    11161 gagaggaaaa atgaacacag acactaaaaa atacatggac cttcttgtaa gtacttatga
    11221 aacaaaagat ttcatcaaag atgaccctgt tcagtttcct cacaggttta aagaaaaaaa
    11281 tgacatcgaa atcgcagcat ttattgcttc tatttttgct tacggaaaaa gggaagtatt
    11341 tattgccaaa cttaacacgc tttttgacat aatgcagcaa aaaccatatg aatttgtaat
    11401 gaattttgat gagaacaacc acagtcttga taattttgac tacaggttct ccataggaat
    11461 agatcttgta caaatagttt taatattaaa agcgctgtat acatcgaacg agtctctgga
    11521 atcacttttt gcttatggtt ggaaaaatac acaaactgta caaggtacat tacaaactgt
    11581 tgtagattat ttttattcca gagttacaat gcctgttagc aaaggatttt ttcatctgct
    11641 gccaaaccct gcaaaaaaaa gtgcttgcaa aagattaaac atgctattga gatggatggn
    11701 nttagagatg gagaagttga ccttggtatc tggaaattta tgcctaagtc agaattattg
    11761 attcctttgg atgtacatgt ggcaaaaata tccagacaat tgggtctgtt gcaaagaaac
    11821 cagaacgatt atggagcagt aatagagttg atgggcaaac tcaaagaatt tgacccatca
    11881 gaccctgtaa aatatgattt tgcaatgttt ggctacggag ttaacaacaa ttaaccagct
    11941 tccttcaaaa gctcataacc tgtcattcct cctaaatcaa caggctcaca accaccgggt
    12001 tggtatgtct gcattacacc tttatgaccg tacaagccaa gtgaaaagac gtcatagccc
    12061 catttattcg gaccttttga tccgttaaca tccacaccta tattagacgc acctttttca
    12121 tcggaatatt caaagtagat cataccgtca gtagtaacaa aagctttttt attctctaat
    12181 ttgctccagt cttcacaagc agaaaaatca ctgttgtatt cttgcataca tccgcctgaa
    12241 acggggtctg attcacaata cttgctaacc tgcatcatat ctttgatata aacaaacaag
    12301 tccttgcatt gatcaaattg atgaccttca gttgacacat cagaaatata acactttggc
    12361 attggctgaa attttgattc agcacgagac atatctactg cctgatccaa agcggaaatt
    12421 gcttttttta aggctacagc attggatctt tggcttgtat cagacataaa agagggtatt
    12481 gtcaaagcag cgacaatgcc tattattgtt acagtaatca aaacttctgc aagagtgaac
    12541 gcttttctta aattcatttt gttttcctta tattctaaat tattcaaatt aattagtctt
    12601 ttttctttct tttcttttta gccttctttt tatcctgtat atctctataa gcgttatcta
    12661 ttgatacttt ggcaatttgt ttacgctgtg ctctgtcata aatcacaagc cagtgtttac
    12721 gcttgatgtt atctacagaa aaagagattc tacctgatgt tctgtctccg ggtttgattt
    12781 tagaaaacat aattgatgtg tcaccaaaaa cagatggata aaaggaggca ttcaaatcat
    12841 tcatcaacga aatatcaaaa cctgtaaaat atttgtctgt caggttagtg ataacaagtg
    12901 cgatagttat tgtattaagt tcgccaaaag gatcctcttc aaaatcgata ttagttatct
    12961 tgagccctaa cccttcacat acaaattctt cttgttttaa agcttctttt ttgaaaacag
    13021 ggagctcaat accatgaaca acttttaccc ttatttcgtc accgggcgag attaaaacat
    13081 cttttccttt tctatacaat gccataccaa gcccaactgc accgccaaga gcagcaccac
    13141 ccgcaagagt atagccctga ctggcaattg cagcaggaag tccaaaaaca tttaatgcaa
    13201 gaaagccacc gactacgccg ccggctgctg tataaccagc accttttgca acgttttttg
    13261 tagttcctat tacagggtta agctttgtgc tcattttacc ctgaataggg atttctctgc
    13321 catcaggtgt aattaaataa tcaaaattga cctcaatcca accgtcacgt ccaagacgtt
    13381 tggaagattg gatttctctt acacagccgt gtgcaattgt accggctggt aaaattaccc
    13441 ctttatcgcc ctccacttca ctggagattt ccgcaaaaaa ctcatcgcct tcttctgtat
    13501 atccggagct taagacttga gaaactgtca ttttaataac atctttagcc tcaagttggt
    13561 caacttcacc cgtaaagagt tctttatttt ccctgtcagc cttatctgtt atctctgcac
    13621 gacctttaaa nnatcgcttt tgttcacaac attggaagat tgagcagact ctgcagcaat
    13681 tgacaccgtt gataggccag tatgtacaaa gataaaagaa attaatatta tataagcaat
    13741 aaactttttc atattaaaaa ttttacccca tatacaaaat taaatcacgt atgtaacgaa
    13801 ttttatttgc aatatagagt atacaactta ttttttggta tagacgctct taaagagggt
    13861 atttcttgaa ggataacttg aaaaaggcct gtttgcttgc cttcttggat aatgttgcca
    13921 tacaatttaa catcattatt attgacatct ttagttgtaa acatagaaat ctgtatctca
    13981 tcaggtgcag taaattgacc gaaaccgatt tgagcttctc taacaatgcc tactgctgtt
    14041 gtaccttttt taatataaag tttgttgttt ttataaacat cttctccaac aataaaattg
    14101 atgcggtcgt taatgtcata attttgaaca gtataatatt caccttttgc agttttcttc
    14161 agaacattgc ttaaggttat acgatttggt gtatagacat taacttcaag catattttgc
    14221 gtgtcataaa caggtaatga ttgcttatta cccaaacttt tgttagtttt tacactatta
    14281 atataagact gaggtaattc atcactgtat acaggatatg catctgcctt ttgaagaaca
    14341 aaacaagata ataaaacggt taatataaat aattttttca tatgcttaac tctaatttac
    14401 tttttatcac ttacaggaat aatatttttg tctttatatc tttctctaat gccggctctt
    14461 tgtttttttg ttgtgagtaa gaagttttga taataaagat tgtttttgta atcgttgtcc
    14521 acaagatact cagggtattt ggaataaata tagctgtaaa tagtaagcaa tctttcagaa
    14581 ccgcctggat gagaaggata tctttcgaac caactgggct ctgcagtaat tttatttaaa
    14641 attacaatca ttgcaatagg gttgtaacct gcatttacca tcaaatcaac accctttttg
    14701 tcagctttaa attcgtaaga ttttgatgag ccggccattg taaacctgcg ccagagtcct
    14761 ttgtgtgcat ccaaaccatg cgctatttcg tggcaaatta cagcagcgag ttcatcatca
    14821 gaatcgagca aaggcaaaag tcctttatag acacttatct gttttgacct cagtgcagta
    14881 acagcattta catctttaga attgacatag aaaaatgtca ttcttttatc aatctggttg
    14941 gcatttaata cccgataacc aatttgcata acctgttttt gatactttgc ttctttatcg
    15001 agtctcagct catcagcaaa aacactgtta atagaaatag ctaatgccag taaacaaaaa
    15061 ataaatcttt tcatgtcatt ctcctgatta ataaaagtta ttttataatt ttttagactg
    15121 ttttgtcaat attaaacact caatttagta ataaaccaca taattttttc tgggtgtaac
    15181 aactgcctga ccacccggga ggaggcgtaa aagaggaaca gcaagaccaa tcaaaaaagg
    15241 tgtggttgcc agctctgcca aaccaatcca aaatgataaa gaatatccgc ttgatgcaat
    15301 ttctccatca agagggatta attttccttt tttgtcatac atttcaaacc cctctattgt
    15361 catttctgca ggagcaccgc ccatagctct tggcgacact tcgcctattt tggcatatac
    15421 aatagtatct ttttcaatca aaaccttgcc atcttttaca acatctttaa caactttaaa
    15481 ggctacttta tcacctatgt agggaaannt ttatcactgt tttgtccatc gaccaatttt
    15541 atatgtttat ttttcgttct gattttatta acaggcttga ggattacggc tactccctct
    15601 tctgttctga cctttctttg ataatcgctt cgtttaaact ttttgttttc atcacttatg
    15661 acaaccggtt catctgtcat aatttcacgt ttatatttgt gtctgcattt tttgatattt
    15721 tgggaagatg ccagttcttt ttccaattca tcttctataa caggcatttt aaattctttt
    15781 cttttaggca cttgttgttt aacgtctttt ttgatgccta ctttgagcat tgtgttttgt
    15841 tttgattttg ttgtattttt tgcataagca ttaatattgc aagcaccaaa agcaatagtt
    15901 gttaaaagga atatagttgt tatctttttc aaaagtatat tcatgacgtt gttttagatc
    15961 cttgtttttt tattttttgc tcttgtatgt ttctaacttt ttttctgtca ttttttgtta
    16021 accgcaaaaa attctgataa taatctgttt caatatattt attttccgca agatacacgg
    16081 gatatttttc ataaatatat tggtaaatat ttttcattct ctctgtgccg ttgtggtgaa
    16141 aaatattgta ttcaaaccat ttttcttctt tagatgtttt gttaagaata ttgattaatg
    16201 caaccggatc atatcctgct tttaccatta aatcgacagc cttt
//
LOCUS       DABS01000218            3022 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_4902, whole genome shotgun sequence.
ACCESSION   DABS01000218 DABS01000000
VERSION     DABS01000218.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3022)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3022)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..603)
                     /locus_tag="CPT85_10070"
     CDS             complement(<1..603)
                     /locus_tag="CPT85_10070"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20422.1"
                     /translation="MVTVSNLLNTRVQNSVTNGSLHSAITKSYVDPNFQARNSDSKTI
                     DSRKYKEDTLLDNTFANRMKISVNKALDIPLVHFPRGLGGAPDYTFFEFLQTAKFPYY
                     VGGPILAALFYAGVKKDSLKSSVAAKAVAKRMATGVALYYAGAALAKSIVNTTTKLVR
                     GVDLKHPYAKAISTSTNQTGVFKKDVEYHSAYESTEFTRTD"
     gene            902..1411
                     /locus_tag="CPT85_10075"
     CDS             902..1411
                     /locus_tag="CPT85_10075"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20423.1"
                     /translation="MPFRYRLQKILDFRIRKKEEQLQNVRNAQALVLKIEGLIDRNNK
                     EIAATRTNMRQADFSMYEAYDNYLKHLYVKGENLEADRQKAQEALDEEKDKLRELEKA
                     VKVLEKHKEHSKEAYIEEEKKAELKQLSEVAIQKYFAKTRQQQEEELQELLKNPLYND
                     QSNEGITPQ"
     gene            1408..2163
                     /locus_tag="CPT85_10080"
     CDS             1408..2163
                     /locus_tag="CPT85_10080"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20424.1"
                     /translation="MNISTGTQTPTDTSAQTQQQANEVQPSANSDKVSNAQKTEEKKE
                     DKTQDTKNDFKTVLEEQKGTDKISIEQMQQNNPNQMVDAQYANKFGFDTISSLKNIKS
                     MYNYDTVKISKDDAKFFADLVDNKQFAMQQNGDKTSLIKFADEIGPTYKSQQTSKVLT
                     DLITKAYNDQKPVRIDFDNNVSVVLKVDTKGKISAEFIPGDKAVEAYLRNNIGFLKQR
                     FDDQNLPYNDIMYRQGGGNQNRERQNQQKNKGE"
     gene            2166..3008
                     /locus_tag="CPT85_10085"
     CDS             2166..3008
                     /locus_tag="CPT85_10085"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20425.1"
                     /translation="MNDSFVNALNTQKSTASWMDAISENLTNIYTPGYRETQASFKTF
                     LNSAIIDGFNKNTGQGKSTPGTSNENVFLEGEGFFTLRRDDGQIVFSRLGEFTFDKEG
                     VYRNTSGMTVQGYILNDKGEIMQGTKPIDADIYAETGIKGGAVNIPTTNIKLWIDPNN
                     GKYLGKYDEFEFKGDGILYGKSDGGKNVVPLYKLAIMNFHNPEGLYEIKXKQGQFIET
                     EESGRPVIGRGEVRGGLLEMSNCDFKANISYYQQAKMQMDVANKLIQTNKSLLQEVLQ
                     LISS"
     assembly_gap    2793..2794
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         1113 a          604 c          569 g          734 t
ORIGIN      
        1 gtcagttctt gtaaattcgg tgctctcgta tgcactgtgg tattccacgt cttttttgaa
       61 tacacctgtc tgatttgttg aagtagaaat tgcctttgca taaggatgtt ttaaatcaac
      121 acctctgaca agttttgttg tggtgttgac aatagatttt gcaagagctg cgcctgcgta
      181 ataaagtgca acacctgtgg ccatgcgttt tgccacggct tttgcagcaa cagaagattt
      241 gaggctgtct ttttttacgc ctgcataaaa taaagctgca aggataggac cacctacgta
      301 ataagggaat tttgccgttt gcaagaattc aaaaaatgtg taatccggag ctcctccaag
      361 acctctgggg aagtgcacca gagggatatc aagcgcttta ttaacgctga ttttcatgcg
      421 atttgcaaat gtgttgtcta aaagggtatc ctctttatac tttctgctgt ctattgtttt
      481 agaatcgctg tttcttgcct gaaaattcgg gtctacatat gattttgtaa tagcagaatg
      541 taaagaaccg ttggtgacgc tattttgaac cctggtattt aatagatttg acacagtaac
      601 catattatcc cttgaatcgc atgtaagtcc taataattaa aggactctca aaaatttttt
      661 tgctagtttg aatagatgaa aatcttaacg aatttctata atctagtcta ccacaggatt
      721 tgcgatataa aattcttttt tacattttgt aatataactg cagtaatttt tgaaaatcca
      781 tgaagattga cttcttctcg atttttatta aaacataatc atacaaacag atgtagtaat
      841 cacaaggcta atactcaata atatagtagg ttaataggtt agtagtaaga tagcaagccc
      901 catgcctttt cgttacagac tccaaaaaat actggatttt agaatccgaa aaaaagaaga
      961 acagcttcaa aacgtacgta atgctcaggc tctggtgcta aaaatagaag gactgattga
     1021 cagaaacaac aaagaaattg cggcaacaag aacaaacatg aggcaggctg atttttctat
     1081 gtacgaagcc tatgacaact accttaaaca cctttatgta aaaggcgaaa acctcgaagc
     1141 cgacaggcaa aaagctcaag aagctttaga tgaagaaaaa gacaaactcc gtgagctcga
     1201 aaaagccgta aaagtacttg aaaaacacaa agaacactcc aaagaagctt acattgaaga
     1261 agaaaaaaaa gcagagctaa aacagctatc ggaagtagca atacaaaaat actttgcaaa
     1321 aaccagacaa cagcaggaag aagaactgca agaattgtta aaaaatcccc tctacaatga
     1381 ccaatccaac gaaggaataa ctccccaatg aatatttcaa caggaacaca aacaccaaca
     1441 gatacatccg ctcagaccca gcagcaggct aacgaggtac aaccctctgc aaactctgac
     1501 aaagtatcta acgcgcaaaa aactgaagaa aaaaaagaag ataaaaccca ggacaccaaa
     1561 aacgatttta agactgtgct ggaagaacaa aaaggcacag acaaaatatc catagagcaa
     1621 atgcagcaaa acaaccctaa ccagatggtt gatgcgcaat atgcaaacaa attcggattt
     1681 gatacaatat caagcttaaa aaacatcaaa tcaatgtaca attatgacac tgttaaaatc
     1741 tcaaaagacg atgcaaaatt ctttgccgac cttgtggaca acaagcagtt cgcaatgcag
     1801 caaaacggtg acaaaacaag cctcataaaa tttgcagacg aaattggccc cacctacaag
     1861 tcgcagcaga catcaaaagt gctgactgac cttattacaa aagcatacaa cgaccaaaag
     1921 cccgtcagaa ttgactttga caataatgtt tcggtagttt tgaaagtaga tacaaaaggc
     1981 aaaatctcag cagaatttat tcccggagac aaagccgtag aagcttattt aagaaacaac
     2041 ataggttttc ttaagcaaag atttgatgac cagaatcttc cctacaacga cataatgtat
     2101 cgtcaaggcg gaggtaatca aaacagagaa cgacaaaatc aacaaaaaaa taaaggagag
     2161 taaaaatgaa tgattcattt gtaaacgctc taaacaccca aaaatccacg gcaagctgga
     2221 tggatgcaat atcagaaaac ctgacaaaca tctacacacc cggttaccgt gaaacacagg
     2281 caagtttcaa aactttttta aactctgcca tcatagacgg ttttaacaaa aacacaggac
     2341 agggaaaatc tacacccggt acgtctaacg aaaacgtttt cttagaaggc gaaggttttt
     2401 tcactctgcg ccgtgacgac ggacaaatcg ttttttcaag gctgggtgaa ttcacttttg
     2461 acaaagaagg tgtatacaga aacacaagcg gcatgactgt ccagggttac atcctcaacg
     2521 acaaaggtga aatcatgcaa ggtacaaagc ctattgacgc agatatctat gctgaaaccg
     2581 gcataaaagg cggtgcagta aacatcccca caacaaacat caagctgtgg attgacccca
     2641 acaacggtaa gtatctgggc aaatacgacg agtttgaatt caaaggcgac ggtatcctct
     2701 acggtaaatc agacggaggc aaaaacgttg tcccccttta caaacttgca atcatgaact
     2761 ttcacaaccc tgaaggactt tacgaaataa aannaaaaca gggtcagttt attgaaacag
     2821 aagagtcagg ccggccggtt atcggaagag gcgaagtaag aggcggtctt ctggaaatgt
     2881 ccaactgcga ttttaaagcc aacatttcat actaccagca ggcaaaaatg cagatggacg
     2941 tagctaacaa actgattcaa acaaacaaat cactgcttca ggaagttttg cagctgataa
     3001 gttcgtaata aaattcctaa tt
//
LOCUS       DABS01000219            2500 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_14914, whole genome shotgun sequence.
ACCESSION   DABS01000219 DABS01000000
VERSION     DABS01000219.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 2500)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 2500)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2500
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            26..463
                     /locus_tag="CPT85_10090"
     CDS             26..463
                     /locus_tag="CPT85_10090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015526182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20416.1"
                     /translation="MRSLIPYADVMKISDEETVLLTDESDIEKAAKKLYEQGVKVIAV
                     TLGSKGAYIYANNSGQYVAPLKCTVKDTNGAGDSFWGGFLYKLSKDKGNLNNLTDNEL
                     SSFAYFANAVASLCVESAGAIPAMPYLANVEERLKNAGLDWCL"
     gene            complement(458..1087)
                     /locus_tag="CPT85_10095"
     CDS             complement(458..1087)
                     /locus_tag="CPT85_10095"
                     /inference="COORDINATES: protein motif:HMM:PF13545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="DAB20414.1"
                     /translation="MNIFENISKQEKNELQKCLQAVLKSYKKDEIIFNADEKVSCIYY
                     VQEGAVELIKDDLNGNEIIIGRIFENETFAESFVCTQTPSMVCAKALTDTKILMLNFN
                     RILNICSNSCPFHKKLLKNLLKIIAFKNIHLQTRLELLSKKTLRERILCLLSKYKKST
                     DSEIFEIPYSREKMAQFLGANRSALSRELSKLKNENLIDYHFNSFKINL"
     gene            1177..>2500
                     /locus_tag="CPT85_10100"
     CDS             1177..>2500
                     /locus_tag="CPT85_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003430549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxylamine reductase"
                     /protein_id="DAB20415.1"
                     /translation="MNKMFCFQCEQTAKCTGCTQIGVCGKTAEVSNLQDELTSSLIKL
                     ANTFPQTEENTNILIEGLFTTITNVNFDAQSIQEDINEVIEKAGSKEFDIQSVWDCNE
                     DIRSLKSLILFGLKGIAAYAHHARVLGYRDNDVDSFFYEALRAISKDLSVDELLALVL
                     KTGEINLKCMELLDKANTESYGTPVPTKVTTNIEKGPFIVVTGHDLKDLAILLEQTKD
                     KGINIYTHGEMLPCHAYPELKKYTHLKGNFGTAWQNQQKEFDNLPGAILFTTNCIMPV
                     KESYKDRVFTSSVVEYPECTHIGEDKDFSPVIEKALELGGYKEDKKMTGINGGDVLTT
                     GFAHNSVLSVASNVIDAVKSGKLKHIFLVGGCDGAKPGRNYYTDFVKLTPSDTLVLTL
                     ACGKFRFNDLDLGDIDGIPRLLDMGQCNDAYSAIKVAIELAKAFDCTVN"
BASE COUNT          843 a          383 c          473 g          801 t
ORIGIN      
        1 aaacgaggaa attgcacaaa taagaatgcg aagcttaata ccctacgctg atgtaatgaa
       61 gatatcagat gaagaaactg ttcttttaac agatgaatca gatatagaaa aagccgcaaa
      121 aaaactttac gaacagggtg ttaaagtaat tgctgttaca ttaggctcaa aaggtgctta
      181 tatctatgcg aataatagcg gacaatatgt tgcaccactt aaatgcacag taaaagatac
      241 aaatggcgcg ggagattctt tttggggcgg atttttgtat aaattgtcaa aagataaagg
      301 taatctgaat aatttaacag ataatgaatt atcttctttt gcatactttg caaatgctgt
      361 tgcaagtctt tgtgttgaat cagccggagc aattcctgct atgccttatc ttgctaatgt
      421 tgaggaaaga ttaaaaaacg cagggcttga ttggtgccta taaatttatt ttaaatgaat
      481 tgaaatgata atctatcaag ttttcgtttt ttaatttaga aagctcccgg gaaagtgcac
      541 ttctgttggc gcctaaaaat tgtgccattt tttctctgga atacggtatt tcaaagattt
      601 ctgaatctgt actttttttg tattttgaaa gaaggcacaa gattcgttct ctcagtgtct
      661 tttttgataa tagttcaagc cttgtttgaa gatgtatatt tttaaatgca attattttca
      721 acaaattttt aagaagcttt ttgtgaaaag ggcaagaatt tgagcatata tttaaaattc
      781 tgttaaagtt tagcattagt atttttgtat cagtaagcgc tttggcacaa accatagaag
      841 gtgtttgggt gcacacaaag gattctgcaa atgtttcatt ttcaaaaata cggccaataa
      901 tgatttcatt accgttcaaa tcgtctttta taagctctac tgcaccttct tgtacataat
      961 aaatacaaga gactttttcg tctgcattaa atataatttc atctttctta taactcttta
     1021 aaacggcctg caaacacttt tgcaattcat ttttttcttg tttggatata ttttcaaaaa
     1081 tattcataga gctatcctaa catatccgtt gcatgtgcaa cagataattt agtacagcca
     1141 atttataatg caattattaa acaaaggaga aatataatga ataaaatgtt ttgttttcag
     1201 tgtgaacaaa ctgctaaatg caccggttgt acacaaattg gggtgtgtgg taaaacagca
     1261 gaggtatcta atcttcaaga tgaattaaca agctcactga taaaattggc taatacattt
     1321 cctcaaacag aagaaaatac aaatattttg atagagggat tatttacaac aataactaat
     1381 gttaattttg atgcgcaatc tatacaagag gatatcaatg aagttataga aaaagcaggc
     1441 tcaaaagaat tcgacataca aagtgtgtgg gattgcaacg aagatatcag aagtttaaaa
     1501 tctcttattc tcttcggttt aaaaggtatt gcagcatatg cacatcacgc tcgtgtttta
     1561 gggtacagag acaatgatgt ggacagtttc ttttatgagg ctttgcgtgc aatatcaaaa
     1621 gatttgtctg tagatgaact cttagcactt gtgttaaaaa caggtgaaat caatttgaag
     1681 tgtatggagc ttcttgataa agccaataca gaatcttatg gaacacctgt acctaccaaa
     1741 gtaacaacaa atattgaaaa aggcccattt atagttgtta cgggccacga tttaaaagat
     1801 cttgctattt tattggaaca aacaaaagat aagggtataa atatctacac ccacggcgaa
     1861 atgctgcctt gccatgcata tcctgagctt aaaaaatata cccacttaaa aggaaatttt
     1921 ggtactgcat ggcagaacca acaaaaagag tttgataatc ttccgggcgc tatattgttt
     1981 acaacaaatt gtataatgcc tgtcaaagaa agctacaaag accgagtgtt tacaagctct
     2041 gttgttgaat atccggaatg tacccatatt ggcgaagaca aagatttttc accggtaata
     2101 gaaaaagcgc ttgagcttgg cggatataaa gaagataaaa aaatgacagg tatcaatggc
     2161 ggtgacgttt tgacaacggg ttttgcgcat aatagtgttt tgtcagttgc ttccaatgtt
     2221 attgatgctg taaaatccgg aaaattaaag catatttttc ttgttggtgg ctgtgacggt
     2281 gcaaaaccgg gaagaaatta ctatacagac tttgtaaaat taacaccttc cgatactttg
     2341 gttttgacac ttgcttgcgg taaattcaga tttaatgacc ttgatttggg tgatatagac
     2401 ggtattccaa ggctgcttga tatgggtcag tgcaacgatg cttattcagc aataaaagtt
     2461 gcaatagagc ttgcaaaagc ttttgactgt actgtcaatg
//
LOCUS       DABS01000220            7977 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_2539, whole genome shotgun sequence.
ACCESSION   DABS01000220 DABS01000000
VERSION     DABS01000220.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7977)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7977)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7977
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..372)
                     /locus_tag="CPT85_10105"
     CDS             complement(<1..372)
                     /locus_tag="CPT85_10105"
                     /inference="COORDINATES: protein motif:HMM:PF14622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="DAB20392.1"
                     /translation="MQSDCSEQKLCEFIKSLGFSDFSISLIKTAFTHSSFTKEHELSY
                     FECYERLEFLGDAVLKMAVTDYLFEHYPEAHEGELTKIRSIVVSDEILHKVAQQLGIE
                     DFIKVSSAEEKRGGRKLEPIQA"
     gene            complement(356..1267)
                     /locus_tag="CPT85_10110"
     CDS             complement(356..1267)
                     /locus_tag="CPT85_10110"
                     /inference="COORDINATES: protein motif:HMM:PF01148.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="DAB20393.1"
                     /translation="MVNILGLFNNTTLRIITGTAIGLFVLACVYAGGIPLMLLVMYVA
                     YIGSKEYVDILQKKGFRPFLHLIIIADICFVILTALKRFDLVPVVLTFGTIGAFTLVL
                     CKGRQPYIANVATTVLGFIYGGWLPCYVILLRQLNQDSLGFFSIKMCSGLGFLLLLFF
                     TILMTDVGGYVFGSKFGKHPLAPVVSPKKTIEGSIGGSLLAILTALLIGWIIHIEWYQ
                     ALIAGLLITTFAQLGDLAESLIKRDAGVKDSGNSLPGHGGFLDRADSYLFSTPVAYFY
                     FNYFVVSDQLTLDFLSFARKALNAVGL"
     gene            complement(1264..1824)
                     /locus_tag="CPT85_10115"
     CDS             complement(1264..1824)
                     /locus_tag="CPT85_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015863476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-recycling factor"
                     /protein_id="DAB20394.1"
                     /translation="MTVDEMLSNGTEKMEKAVAALKKEFGQIRTGRANPLILDKVVVD
                     YYGVPTPLRQMSQVSVQDGQTLVITPYDKTILKEIEKAMIKAELGITPNSDGLVIRLT
                     FPPLTEERRKEICKDVKKTAEDSKVAVRNIRRDMTDDLKKLEKEENLPEDAVKDNQDK
                     IQKLTDKYVKIIDEIAAEKEKEVMTV"
     gene            complement(1827..2552)
                     /locus_tag="CPT85_10120"
     CDS             complement(1827..2552)
                     /locus_tag="CPT85_10120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_535453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="DAB20395.1"
                     /translation="MDNSLKYKRVLLKVSGEALLGDQEFGIDQKPVEMIAKEIKEAHD
                     MGAEIAVVVGGGNIFRGMKNSAKLGMDQASGDYVGMLATVMNAIAIQSALRKLNVSCR
                     VQTAIDMDKIAEPYIRFKAMRHLEKSRVVIFAAGTGNPFFTTDTAAALRASEIDAQVM
                     LMAKNGVDGVYSDDPRVNPEAKKYDKISYDDIIVKGLKVMDTASCALCKQNNIPIIVF
                     DFAAKGSIAKLLRGEKLGTFVGE"
     gene            complement(2640..3452)
                     /locus_tag="CPT85_10125"
     CDS             complement(2640..3452)
                     /locus_tag="CPT85_10125"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20396.1"
                     /translation="MYGKIKYFIYAAFILIIVFVIMDASNRYTKMAEQKNPQQTIQDE
                     AFRRAQLAVENQNQRDNERQNAQYEQEEAAPITDPNNQAVQNNIEQQETTLAETPEEI
                     MKRSQYGSIKEDNSSPDDDIEEGEINQGYFTFESGEKAEQYKLYKGFTLMDENSYAVV
                     SYVDXXSSYINEKFYLYKLVNGKYYRSNYLFDNASTKAQYNAKEKNDDESIVTLQEEK
                     YEIVLNYNNKITRRINKNQLNTNYYQYKSLPALILKQTETPSENTNEDNSEE"
     assembly_gap    2957..2958
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(3522..5651)
                     /locus_tag="CPT85_10130"
     CDS             complement(3522..5651)
                     /locus_tag="CPT85_10130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009629270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="DAB20397.1"
                     /translation="MVDVKKIEIPVGDKVVTIETGKYAKSASGSVVVRCGDTMLLVHA
                     VVSPEPRVGIDFFPLLIDYEERMSAVGRIPGGYNRSEGKASDKAILISRLIDRPIRPL
                     FPKGYRNDVQIVSQLVSLDHECQPDTLAMLGSSAALMLTEAPFEGPIGAVRVGRIDGQ
                     FVANPSYADAAKSDIDIVVAGTHDSVIMVEAGAKFVTEEDIMNAVEFAQKEIARQCEL
                     QEQFARECGINKPEFVNPYDTTAIAKIINDIAYDKVTEAYHDFDREGRKAKLDEAKKM
                     VKAEFDSYGDDHEAKIMMAETGIDFVAEEFKALEKKIMRKMIKEEGVRADGRKYNEVR
                     PIWCEVGVVPRAHGSAVFTRGQTQIMSVATLAGPGMAQELDGVDPETKRTFMHKYIFP
                     GFSVGEVKPLRGPGRREVGHGHLAERANVPALPSQDEFGYTIRVTSDVLESNGSTSMG
                     STCATSMALMNAGVPVKCMIGGVAMGLIKEGGEDIVLTDIQGIEDFLGDMDFKVTGND
                     TGITALQMDMKAKGISNDTLRRALEQAKEGRLHILGKMREVITEPAKEMSPYAPRIHT
                     MKIANEDIGAVIGPGGKNIRHIIECSGAEIDIQDDGTVTITSNDKEGTDIAIRMIDAI
                     TFKPEVGMVKKGKVVRIIPIGAFVELAPGKDGMVHISQVCNERIETIEPHLNVGDEVV
                     VKVIKIDDKGRVNLTVKGVSDEEKASV"
     gene            5840..6136
                     /locus_tag="CPT85_10135"
     CDS             5840..6136
                     /locus_tag="CPT85_10135"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20398.1"
                     /translation="MSIEPLNFSNNKYELTGNEQNTVTQKKDTINNVMNPDNRIVEDE
                     SYKTNSEADKEKTKSDEGEKLSFKDRWQNFKGKLHKILHKEKKQPKDKPHIAEK"
     gene            complement(6207..6461)
                     /locus_tag="CPT85_10140"
     CDS             complement(6207..6461)
                     /locus_tag="CPT85_10140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017321313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="DAB20399.1"
                     /translation="MAHKKGVGSSKNGRDSESKRLGVKKFGGEQVLAGNIIVRQRGTK
                     FHPGNNVGIGKDDTLFALIDGKVQFEPHRRDRKQVSVYAV"
     gene            complement(6492..6854)
                     /gene="rplU"
                     /locus_tag="CPT85_10145"
     CDS             complement(6492..6854)
                     /gene="rplU"
                     /locus_tag="CPT85_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010899155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="DAB20400.1"
                     /translation="MYAIVETGGKQYKLEEGRYVDIELVDGEENDKVVFDKVVMLVNG
                     AKSKVGAPYVDKASVEGKIVKHDKDKKVIVFKQRAKKGYRKKQGHRQFFTRVMVTKIR
                     TTAAKTKAAEAETTTEEA"
     assembly_gap    7121..7182
                     /estimated_length=62
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(<7183..7969)
                     /locus_tag="CPT85_10150"
     CDS             complement(<7183..7969)
                     /locus_tag="CPT85_10150"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20401.1"
                     /translation="MDIALKNKKGREFDFIDLSTELFDSLGRKTAFDTSGWYKNNTKL
                     QQRAEKYAKHFAQSQNMEKLNAFNVSFNVFNQSYISSVKAMEKGDKEKALRLRERFVS
                     DMANTLFTFTPIAQSPKFSVLLRAFHPSEKSTKNFNANDLILLCQEVLKKLKDMYTKD
                     LAGEQKVIKSKEDLNKFYNIFENKLSVIDTGLNSSGRMAQFIKDHNIKTTRLQDHAKI
                     TPQVINYYKENARRAPLIMQRYIDTDGRVYNMDYARFLKTEIQL"
BASE COUNT         2189 a         1577 c         1278 g         2869 t
ORIGIN      
        1 ggcttgtatg ggctctaact ttcttcctcc gcgtttttct tcagcactgc ttactttgat
       61 aaaatcttct ataccaagct gttgcgctac cttgtgcaaa atttcatcac ttaccacaat
      121 ggatctgatt tttgtcaatt ctccttcatg agcttctgga taatgttcaa aaaggtaatc
      181 agtaactgcc attttcaaaa cagcatcacc taaaaactcc agcctttcat agcattcaaa
      241 ataagaaagc tcatgttctt ttgtaaaaga actatgagtg aaagcagtct ttataagtga
      301 tattgagaaa tcactgaaac caagactttt tataaattca cacaatttct gctcactaca
      361 gtccgactgc atttaacgcc tttctggcaa aacttaaaaa atccaatgtt aactggtcgc
      421 ttactacaaa ataattgaag taaaaataag caacaggtgt actgaataaa taactgtccg
      481 ctctatctaa aaatccgcca tgacccggga gtgaattgcc tgaatctttg acacccgcat
      541 ctcttttgat aagtgattct gccaaatcac caagttgggc aaatgttgta atcaaaaggc
      601 ctgcaataag ggcttgatac cattcgatgt gtataatcca gcctattaat agagctgtta
      661 agattgcaag taaagaccct ccaatagacc cttcaatggt ttttttaggg ctgacaacag
      721 gcgcaagagg atgtttaccg aattttgaac cgaaaacata tcctccaaca tctgtcataa
      781 ggatggtaaa gaataaaagt aataaaaatc caagaccgga gcacatcttt attgaaaaaa
      841 atcccagtga atcttgattt aattgtctta aaagaatcac ataacaggga agccaaccgc
      901 cgtatataaa accaagcact gttgttgcta cgtttgcaat atacggctgt cttcctttac
      961 ataatacaag cgtgaatgca cctattgtcc caaaagtgag tacaacaggc acaagatcga
     1021 atctttttaa cgcagtaagg attacaaagc aaatatctgc aataataatc aaatgcaaaa
     1081 aaggtctaaa cccttttttt tgcaaaatat caacatattc tttggaacca atatatgcaa
     1141 catacattac aagaagcata agcggtattc ctcctgcata aacgcatgca agaacgaata
     1201 accctattgc ggtgcctgta attatcctca atgttgtatt gttaaaaaga cccaatatat
     1261 tcactatact gtcataacct ctttttcttt ttctgcagca atttcgtcaa taatttttac
     1321 atatttatca gtcaattttt gaattttatc ctgattatct tttactgcat cttcaggaag
     1381 gttttcttct ttttctaatt ttttcaggtc atcagtcata tctcttctga tatttcttac
     1441 tgcaacttta gaatcttctg ctgttttttt aacgtcttta cagatttctt ttcttctttc
     1501 ttctgtcaaa ggcgggaatg ttaatcttat gacaagaccg tctgagtttg gtgtaatacc
     1561 aagctctgct ttaatcatag ctttttcgat ttcttttaag atagttttgt cataaggggt
     1621 aataacaagt gtttgtccgt cttgtactga tacctgagac atctgtctta atggagtggg
     1681 aacaccgtaa tagtctacca ctactttatc caaaataagc ggattagctc tgcctgtacg
     1741 gatttgtccg aattcttttt ttaaagcggc aacagctttt tccatctttt ctgtaccgtt
     1801 tgataacatt tcatcaactg tcatttttat tctcctacaa aagtccctaa tttttcgcct
     1861 cgtaaaagtt ttgcaatact gccttttgct gcaaaatcaa atacaataat cggaatatta
     1921 ttttgtttgc ataatgcgca tgatgcagta tccataactt tcagaccttt aacaattata
     1981 tcatcataag atattttgtc atattttttt gcttcggggt taactcttgg gtcatccgaa
     2041 tacacaccgt caacaccgtt tttagccatc agcataacct gtgcatcaat ttcagaagct
     2101 cttaaagctg cagctgtatc tgttgtaaag aatggattgc ctgtgcctgc agcaaaaatt
     2161 acaactctgc ttttttcaag gtgtctcatt gctttaaatc ttatataagg ctctgcaatt
     2221 ttatccatgt caatagctgt ctgtactctg caagatacat tgagctttct caatgcactt
     2281 tgtatagcta ttgcattcat aactgttgca agcatcccta cataatcacc ggaggcttga
     2341 tccattccga gttttgcact gtttttcatt cctcgaaata tatttcctcc acccacaaca
     2401 accgcgattt cggcacccat gtcgtgggct tcttttattt cttttgcaat catttcaaca
     2461 ggtttttggt ctatgccaaa ctcttgatca ccaagaagag cctccccgct aacttttaac
     2521 aaaactcttt tatattttaa gctattgtcc atttttgttt cctatactgt atgtcattat
     2581 taaagaaatt ataccgaaaa atagatttac tgtaaatttt cgtttacagt aaaaatctgt
     2641 tactcttcgc tattatcttc atttgtattt tctgacggag tttccgtttg ttttagtatc
     2701 aaagcaggta gtgatttgta ctggtaatag tttgtattta attgattttt atttattctt
     2761 cgagtgattt tgttattgta gtttaaaaca atttcgtact tttcttcctg gagtgttaca
     2821 atgctttcgt catcattttt ttcttttgca ttatattgag cctttgttga ggcattatca
     2881 aacaggtaat tgcttctgta atatttgcca tttaccagtt tgtacaaata aaacttttca
     2941 ttgatataag atgaatnnct atcaacgtaa gaaacaactg cataggaatt ttcatccatc
     3001 aatgtaaatc ccttgtagag cttgtactgt tcagcttttt ctcctgattc aaaagtgaaa
     3061 tacccctgat taatttctcc ttcttcaata tcatcgtccg gagatgagtt atcctctttg
     3121 attgaaccat attggctacg tttcataatt tcttccggtg tttctgccag tgttgtttct
     3181 tgttgttcta tattgttttg aacagcttga ttattggggt ctgtaatcgg tgcagcttct
     3241 tcttgctcat attgcgcatt ttggcgttca ttatcccttt ggttttgatt ttccacagct
     3301 aattgtgcac gtctaaaagc ttcatcttga atcgtttgct gcgggttttt ctgttctgcc
     3361 atttttgtat atctgttgct tgcatccata attacaaata cgattattaa tataaatgca
     3421 gcataaataa aatattttat tttcccgtac atataattac cccttttttt tatgaaaaag
     3481 ggaacttatt actaagctcc ctttttggta ttatcagtta tttatacaga cgctttttct
     3541 tcgtcagaaa cacctttaac agtaaggttt actctgcctt tgtcgtcaat tttgataact
     3601 ttaacaacaa cttcatcacc aacgtttaag tgcggttcta ttgtttcaat tctctcgttg
     3661 caaacttgag aaatgtgaac cataccgtct ttgccgggtg caagctctac aaatgcgccg
     3721 attggaatga ttctaacaac ttttcctttt ttaaccatac caacttcagg tttaaaagta
     3781 attgcatcaa tcattctgat agcaatatca gtaccttctt tgtcgttgct tgtgattgta
     3841 acagtaccgt catcctggat atcaatttcc gcacctgaac attcgatgat gtgtctgatg
     3901 tttttgccgc caggtccgat tacagcgccg atatcttcgt tagcaatctt cattgtgtgg
     3961 attcttggtg cgtatggtga catttcttta gccggttcag tgattacttc tctcattttg
     4021 ccgaggatgt gtaatctgcc ttctttagcc tgttctaaag ctcttcttaa tgtgtcgttt
     4081 gaaatgcctt ttgctttcat atccatttga agtgctgtga tacctgtgtc gttacctgta
     4141 actttaaagt ccatatcgcc taagaagtct tcaatacctt ggatatctgt taatacgata
     4201 tcttcgccgc cttctttgat aagacccatt gcaacgccgc caatcataca tttaacagga
     4261 acacctgcgt tcatcaatgc cattgatgtt gcacaagttg agcccattga tgtagaaccg
     4321 tttgattcca atacatctga tgtaactctg attgtgtagc cgaattcatc ttgagaagga
     4381 agtgcaggaa cgttagctct ttcagccagg tgtccgtgac caacttcacg tctgccggga
     4441 cctcttaatg gtttaacttc accaaccgag aatcctggga agatgtattt gtgcataaat
     4501 gttctttttg tttcagggtc aacaccgtca agctcttgag ccattccggg gccggcaaga
     4561 gttgctactg acataatttg agtttggcct cttgtgaaca ctgcagaacc gtgtgctctt
     4621 ggtacaacac ctacttcgca ccagatagga cgaacttcgt tgtattttct tccatcagct
     4681 cttacgcctt cttctttaat catttttctc atgattttct tttcaagagc tttgaattct
     4741 tctgcaacaa agtcaattcc tgtttcagcc atcatgattt tagcttcgtg gtcgtcaccg
     4801 tatgaatcaa actctgcttt aaccattttt ttagcttcat caagtttagc ttttctgcct
     4861 tctctgtcaa agtcatgata agcttctgta actttgtcat atgcaatatc attgatgatt
     4921 tttgcaatag ctgttgtgtc gtaagggtta acaaattcag gtttgttaat gccgcattct
     4981 cttgcaaatt gctcttgaag ttcgcattgt cttgcaattt ctttttgagc aaattcaaca
     5041 gcgttcataa tatcttcttc tgtaacgaat tttgcgcctg cttcaaccat gattacagaa
     5101 tcgtgagtac ctgctacaac gatatcaata tcagattttg cagcgtcagc ataagacggg
     5161 ttagcaacaa attgtccgtc aattctgcct actcttacag caccgatagg gccttcaaaa
     5221 ggagcttctg tcaacatcaa agctgctgaa gagcctaaca tagccaatgt atcaggctgg
     5281 cattcgtggt ctaagcttac taattgtgaa acgatttgaa cgtcgtttct gtatccttta
     5341 gggaacaaag gtctgattgg tctgtcgatt aatcttgaaa tcaagattgc tttatcagaa
     5401 gctttacctt cgcttctgtt gtatccaccg gggattctgc ccacagctga cattctttct
     5461 tcgtaatcaa ttaataacgg gaagaaatct atcccaactc tcggttcagg gcttacaaca
     5521 gcatgaacca ataacattgt gtcgccgcag cgtacaacta ccgaaccact cgctgatttg
     5581 gcatacttcc ctgtttcaat ggtaactact ttgtcaccta caggaatttc gattttttta
     5641 acatctacca tgttttcttt ttcctttttt ctttttctac ttttgcactt ttactgtgtt
     5701 cctttaaagt atatcgtaaa cattaacttc attcaatttt ttaataaaat taagtattgt
     5761 aaattaatgt tttatttatt taagtttttc tttaaaaatg ccgttaatat gattgttgca
     5821 gtaagatagg gtgcgttaaa tgagtattga gcctttaaat ttttcaaata acaaatatga
     5881 attgactgga aatgagcaaa ataccgttac tcaaaagaaa gatacgataa ataacgtcat
     5941 gaaccccgac aatagaattg ttgaagatga atcctacaaa acaaatagcg aagcagataa
     6001 agaaaaaaca aaatctgatg aaggagaaaa actttctttt aaagaccgct ggcaaaattt
     6061 taaaggcaaa ctacacaaaa tactgcataa agaaaaaaaa caaccaaaag acaaacctca
     6121 tattgctgaa aaataactcg tataacacta ccgaatcata aaaaaaagcg gactgagaac
     6181 agcccgcttt ttttattgtt ttaatcttat acagcgtaaa cgctaacttg ttttctgtct
     6241 cttctgtggg gttcgaattg aactttacca tcgatgagag caaacaatgt gtcatcttta
     6301 ccgataccaa cattgttgcc ggggtggaat ttagtgcctc tttgacgaac aataatattg
     6361 ccggcaagaa cctgttcacc gccgaatttt ttaacgccta atcgcttact ttcgctgtcg
     6421 cgtccgtttt tggatgagcc aacgcccttc ttatgtgcca tttttatttc tccttgtaat
     6481 tgttgttata tttatgcttc ttctgttgtt gtttcagctt ctgctgcttt tgttttagct
     6541 gcagttgttc tgatttttgt aaccattact cttgtaaaga actgtctgtg gccttgtttt
     6601 tttctatagc cttttttagc tctttgtttg aatacaatta cttttttatc tttgtcatgt
     6661 ttaacaattt taccttcaac agaagctttg tctacgtaag gagcaccaac tttagactta
     6721 gcaccgttta cgagcataac aactttgtcg aatacaactt tgtcattttc ttcgccgtct
     6781 acgagttcga tatcaacgta gcgaccttct tctaatttgt actgttttcc gcctgtttca
     6841 actattgcgt acatttgtat ttcctttcat ttcgggagtc gtagcctgag catttaatga
     6901 cgacttaccc atctaacatt cgtattgata agtttatcaa ctacataact aactgtcaac
     6961 actggatata taagcaaatt aacaaattta aataataaaa acccgacaat cattagtcgg
     7021 gtaaaatagc tggatcgtgt ctgggtaatt aaatgttaat atttatacta cccgttgatt
     7081 tttatttgta tattacccga ctgtattata ttttattctt nnnnnnnnnn nnnnnnnnnn
     7141 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nntgagctga atttctgttt
     7201 ttaaaaacct tgcgtagtcc atgttataga ctcttccatc tgtgtctata tatctttgca
     7261 taatcaaagg agctcttcgt gcattttctt tgtaataatt tattacttgc ggtgtaattt
     7321 ttgcatggtc ttgcaatctt gttgttttaa tattgtgatc ttttatgaac tgtgccatac
     7381 ggcctgatga gtttagtcct gtatctatta cagacagttt attttcaaaa atattataaa
     7441 acttattcag atcttctttg cttttaatga ctttttgttc tcctgccagg tcttttgtat
     7501 acatatcttt tagttttttc aagacttcct ggcatagtaa aatcaaatca tttgcattaa
     7561 agttttttgt gcttttttct gacggatgaa atgcccttaa gagaactgaa aacttggggc
     7621 tttgtgcaat cggtgtaaaa gtaaaaagag tgtttgccat atctgaaaca aaacgttctc
     7681 ttaatcgtaa tgctttttct ttatcacctt tttccattgc ttttacggat gaaatatagc
     7741 tctgattaaa gacattgaaa gagacattaa aagcgttaag cttttccata ttttggcttt
     7801 gggcaaagtg ctttgcatat ttttcggccc tttgctgtaa ttttgtatta tttttgtacc
     7861 atccagatgt gtcgaaggca gtctttcttc ctagagaatc aaataattct gttgataaat
     7921 caataaagtc aaattccctg ccttttttat tttttaaagc tatatccatg caatcag
//
LOCUS       DABS01000221           10822 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_16750, whole genome shotgun sequence.
ACCESSION   DABS01000221 DABS01000000
VERSION     DABS01000221.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 10822)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 10822)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10822
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..212)
                     /locus_tag="CPT85_10155"
     CDS             complement(<1..212)
                     /locus_tag="CPT85_10155"
                     /inference="COORDINATES: protein motif:HMM:PF13414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20371.1"
                     /translation="MSKDELALIEFRNAFTIKPDLDDLKFDYANLLADMGKTQDAINM
                     YKEYIQYKPKDPMAYFNLGLIYQKNS"
     gene            complement(219..377)
                     /locus_tag="CPT85_10160"
     CDS             complement(219..377)
                     /locus_tag="CPT85_10160"
                     /inference="COORDINATES: protein motif:HMM:PF07719.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20372.1"
                     /translation="MQLCIQKXXNEYSNYGLALLRSGDYTNAVEMFKKAVRIDPNDYA
                     SHANMALA"
     gene            complement(349..984)
                     /locus_tag="CPT85_10165"
     CDS             complement(349..984)
                     /locus_tag="CPT85_10165"
                     /inference="COORDINATES: protein motif:HMM:PF13432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20373.1"
                     /translation="MIFLKKHKIIETMKRELTLFVSLMLALSPLGSDFSAHAKMSPDS
                     YRLFQESNILEKDSNYSMAVEKIKKAIELSPDEAILFIKLGGIYSEMGDWQNALVAYK
                     KAIKLKPNDAVVYISIGNILQQQHDYENAFSAYNQALTIFPEYKYNYLNLANVKFLQG
                     DNQEAIKYFKTFLGYYPDDVEARENLASTYLKLDKYQDAADEYATLYTKNX"
     assembly_gap    353..354
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(981..1556)
                     /locus_tag="CPT85_10170"
     CDS             complement(981..1556)
                     /locus_tag="CPT85_10170"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20374.1"
                     /translation="MKKFLISLMVLLAVNMPVFASETLLKGSVLYTVESARKLAFEGL
                     ALKLDKEKIKPYLIDENNEENRAAIKNNVQPEGRYIMSFSMAKGMVKGYVVVYADKPQ
                     YAYYYTTSGYLVCVDVDNKSQEGVYPFKIGKYNAVTGNLIAIGLYVSEDEQYAYTKNG
                     KLKAHWVGDTGYNAKGKPIAKRSVVNEIPAD"
     gene            complement(1559..3013)
                     /locus_tag="CPT85_10175"
     CDS             complement(1559..3013)
                     /locus_tag="CPT85_10175"
                     /inference="COORDINATES: protein motif:HMM:PF14667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20375.1"
                     /translation="MTKEVDKYIQEVALPLKHIFKDMAKSAPSKIFGLLGNAIIVPVY
                     TNLLAPTQYGIYAISLAVLSFLCILFSDWIGLAGLRFFRQNQLCDEIPKYISTLVMIL
                     ISNLCVMYILTISFRHAFYEYFNIPPKIFLFVLLLIIPVAVRALLFQVLRAQIKPGAF
                     TVSTIVNQVLTILCAVYFIHFLHFGAAAILIGMAVSIVIIDILLVFQTDLLWYLRLEK
                     PDFKTIKSIFAYGIPIVVASISLWIINQSNKFITSHFHGLSDAGFVGVAYNMTFPILM
                     TLFAIITIAAYPRIINHYEDKIDVRPVISKLTGYYMLIALPIVIIMCIYAKDIMAVFA
                     NEQYQNAYILLPYFAFSAFFLSFTDYTTYQYHLSKKTYILTTLKVVSALIGLVLNIVL
                     IKKFALTGVGIATLISNILYFILTVTVVVPSLEWKIPVKRILHLALCFIPTGCLWFVL
                     CKTSVLAMLQINILLIFYYLLFYFTKRFFKEEPV"
     gene            3220..4761
                     /locus_tag="CPT85_10180"
     CDS             3220..4761
                     /locus_tag="CPT85_10180"
                     /inference="COORDINATES: protein motif:HMM:PF02321.16"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20376.1"
                     /translation="MNKFLRIKLLSSILVLSFVTVQTCPCAYAFSLPFKKKKTEKIEQ
                     TKATSAVQIKAEKNEIVEYSLEDCIDIALKNDPNIKIYTTQKGIAHSQLGIAKSGYFP
                     NITASTGFTSQQNRNSGSGGGFYNQGGSTSRSNNYYQLNLGVNQLIWDFGKTVAKINM
                     QKYNKESVGYDLENTILNTVYNVKLAYYKALAALANQDVYERSVRINQLNYDRTNALF
                     KEGLKSKIDVVNAQVYLTDAEVSLIDAQGKYDAAIINLNNAMYLTDAPSYNIKNTESF
                     NFKRTQTSKDTVNISYVPKKSGSKEYEQTAVLTSGIEKQDILQDYKFKPLILPVNDAI
                     QKAYENRPDLKSLLMVEKVQQESLKVIRRQYMPVVSLSAGYNYRRNSEVANTGLNIGV
                     TADLPTLNIMGVKYNVDQGHQYLELARENINLSKKNIYFEIQNNYINMVVLQRKIPKM
                     AEKVEQTLENFELADGRYTVGLGNFIELQQAQTNYNNAQLAFVQAVFDYNVAKEQFQK
                     SMGVR"
     gene            4758..5924
                     /locus_tag="CPT85_10185"
     CDS             4758..5924
                     /locus_tag="CPT85_10185"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="DAB20377.1"
                     /translation="MKKRILISISALIAVVFVSGFAFYFNKHRDSGYITVPAKVDTIV
                     EAVEASGTVNPVNTVDIGSQVSGMIKDIYVDYNSKVTKGQLLAQIDPSLFQAQVDKAR
                     GDLEAARSNKAKIQAMLVYDKKNYERYKRLYEKNYVAKSDLDLAEATYKSDLAQIAAA
                     QGTINQAQATLNNNLTNLRYTKIVSPVDGIVVSRAVDVGQTVAASFQTPTLFQVAQDL
                     TNMQIEVNVSEADIGKIKKGQEVEYTLDGYADSVFHGKVTEVRIAPTTVSNVVTYTVI
                     VDVDNKDQKMIPGMTANASIITNKSENVICVPTDALKFTPKEITGGKKYKEQGLWILR
                     NNKPTRISIETGAKDSDRTEIISKELKENDRVIISKKGDKDKTAQGKRPPMRMF"
     gene            5926..6645
                     /locus_tag="CPT85_10190"
     CDS             5926..6645
                     /locus_tag="CPT85_10190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006308302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="DAB20378.1"
                     /translation="MSNTDLIVIKNLIKTYATGDTSFNALDDVSLSVKQGEFVAIMGA
                     SGSGKSTFMNVLGCLDKPTSGTYFLDGIDVSKMTMDELSAIRNRKLGFVFQGFNLISR
                     TSALENVEMPMIYKGIPPEERIKRAKAALKIVGLEKRETHMPNQMSGGQQQRVAIARA
                     IVNDAPIILADEPTGNLDTKTSIEVMEFFVKLNSAAGKTIVLVTHEPDIAEYAKRVVT
                     FRDGKIISDVLNEAPKGAAAL"
     gene            6642..7858
                     /locus_tag="CPT85_10195"
                     /pseudo
     CDS             6642..7858
                     /locus_tag="CPT85_10195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011417678.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter substrate-binding
                     protein"
     assembly_gap    7082..7083
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(7861..8661)
                     /locus_tag="CPT85_10200"
     CDS             complement(7861..8661)
                     /locus_tag="CPT85_10200"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20379.1"
                     /translation="MDSTLIVNVDYFNNAHKSIDKMLKDFRFKATPRKDGGNDIAMPI
                     LPFFNKDKQLDIMLLSAKFVNGEASKMDIVALNKSFKDYYAYSNVLDANPMAIINDIY
                     SQKGVVDLLKKHMKQGSFKSVEELGKMTNKEQVDYLFEASDALTGLPFNQHPSSKILA
                     SKRSVFDTLYHEEGHLFHHKNTILDYEDMHVVYNKQTGKPDKIGALAKGFLESKEEQF
                     IASTVSRYAKSSPLEFVAEVYARMLNGEKFGDDVMNLYNKYKGPVLPD"
     gene            complement(8672..9064)
                     /locus_tag="CPT85_10205"
     CDS             complement(8672..9064)
                     /locus_tag="CPT85_10205"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20380.1"
                     /translation="MTQDTTSFTTKAPEVEEKKKNSAKKWGILAGAALAVTAAGLIIR
                     GRLKSVTQLAEHIDFTPAKTMEEAKEFAKKHLKIEKFDTANDLDLANWVNEGLVNINN
                     KYKGKGHIPKEVMPVPDELKDXXENRRR"
     assembly_gap    8690..8695
                     /estimated_length=6
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     assembly_gap    9136..9140
                     /estimated_length=5
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            9403..10131
                     /locus_tag="CPT85_10210"
     CDS             9403..10131
                     /locus_tag="CPT85_10210"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00072.22,HMM:PF00486.26"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="DAB20381.1"
                     /translation="MAKRLLVVDDDDEIRELLEFDLSHSGYSVDTACDGMDGLNKAVT
                     NSYDLVLLDVMMPKMNGFDVCKNLRKAKPDIPVLLLTAKGTITDKTQGFDCGADDYLV
                     KPFDIQEVLLRVKALLRRNTDSSNSDTAFKHEILKMGDIELFPESLETGIEGKRIKLT
                     PTEFEILYCLMQHFNDSVSLAVLLDEVWGYDSDEDVRMVRVHVGGLRQKIEADTKNPK
                     YLHTVTNVGYKLTPITNTTDNGQE"
     gene            10131..>10822
                     /locus_tag="CPT85_10215"
     CDS             10131..>10822
                     /locus_tag="CPT85_10215"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20382.1"
                     /translation="MKNPIKFKRLKIVEQIILVLLLAVIVPTTISAIIVNNINQHAVR
                     NELQYSALSIAESIASNIETFSESGEDELNQIVLALRHIPSEFGKEIYLKDILNNSNL
                     ITEMYLVKKQDTDKYIKWDDYSAYNKENKNIEIFQKIDNNFAVMAKVDVKIFEKQVFN
                     IYRKDDRQIYILNKDNKLVAAHNYNEKDFNRVTYALPKKLVIDRPVIFGKVKNQPLAY
                     FKLSDPETTIIV"
BASE COUNT         3728 a         1980 c         1974 g         3125 t
ORIGIN      
        1 tgtgaatttt tttgataaat caagccaagg ttgaaataag ccattggatc ttttggcttg
       61 tactgtatgt actctttgta catattaata gcatcttgag ttttgcccat atcagcaagc
      121 agatttgcat aatcaaattt taaatcatca agatcaggct tgatagtaaa agcgtttcta
      181 aattctatca gagcaagctc atcttttgac aatcttacct atgcaagcgc catattggca
      241 tgcgatgcat agtcattagg gtcaatcctt acagcttttt taaacatttc tacggcgttt
      301 gtgtaatcac ctgagcgaag aagtgccagc ccgtagttgg aatattcatt aannattttt
      361 tgtatacaaa gttgcatact cgtctgcagc gtcttggtat ttatccagtt tcaaataagt
      421 agaggcaagg ttttctcttg cttcgacatc atcagggtaa tagcccaaaa atgttttaaa
      481 gtatttaata gcttcttgat tatctccttg caaaaattta acattagcaa ggttgagata
      541 attatatttg tattcgggaa aaatagtgag ggcctgatta tatgcagaaa atgcattttc
      601 ataatcatgc tgttgttgga gaatattgcc tatactgatg taaacaacag cgtcatttgg
      661 cttgagtttt atagcttttt tataagccac aagagcattt tgccagtcac ccatttcgga
      721 atatattccg ccgagtttta taaaaaggat agcttcatcc ggagaaagct caattgcctt
      781 tttaatcttt tctacggcca tagaatagtt actgtctttt tccagaatat tggactcttg
      841 aaaaagcctg taagaatcag gcgacatttt tgcgtgtgca ctaaaatcag agcctaacgg
      901 cgaaagtgca agcattaaag atacaaataa agttaattct cttttcatgg tttctattat
      961 cttatgtttt ttcaaaaaaa tcaatcagca gggatttcgt ttacaacgct tcgttttgca
     1021 ataggttttc ctttagcatt atagcctgta tcaccaaccc agtgagcctt tagttttcca
     1081 ttttttgtat atgcatattg ttcatcttcc gaaacataaa gcccaattgc aataagattt
     1141 cccgtcacag cattatattt acctatttta aaaggataaa cgccttcttg cgatttgttg
     1201 tctacatcca cacaaacaag atagccgctt gtcgtataat aatatgcata ttgcggctta
     1261 tcagcataaa caactacata gccttttacc atacctttgg ccattgaaaa cgacattata
     1321 tatctgcctt caggttgaac gttatttttt atggcagctc tgttttcttc attgttttca
     1381 tctataaggt agggttttat tttttctttg tccagtttta gagctaatcc ttcaaaagca
     1441 agttttcttg cggattctac agtataaagg acgctgcctt tgagcaatgt ttcacttgca
     1501 aaaacaggca tatttacagc caaaagcacc atcaatgata taagaaattt tttcatattt
     1561 atacaggctc ttccttaaaa aatctttttg taaaataaaa cagcaaataa taaaatatca
     1621 gcaatatatt tatttgcagc attgctaaaa cagacgtttt gcaaagcaca aaccacaagc
     1681 atcctgtggg aataaagcac aaagcaagat gcaaaattct tttaactggg attttccatt
     1741 ccaatgaagg aaccaccact gtgaccgtca atataaaata caaaatattt gatataagag
     1801 ttgcaatacc aacacctgtt aaggcgaatt ttttaatcaa tacaatattt aaaaccagcc
     1861 cgatgagagc ggatacaacc tttaatgttg tcaggatata tgtttttttt gaaagatgat
     1921 actggtatgt tgtgtaatca gtaaagctta agaaaaatgc actaaaagca aaataaggaa
     1981 gcagtatata agcattttga tattgctcat ttgcaaaaac tgccataata tcttttgcat
     2041 agatacacat tataatcact atgggcagtg caataagcat ataataaccc gtaagttttg
     2101 aaataacagg ccttacatct attttgtctt cgtaatggtt gattatacga ggatatgcgg
     2161 caattgtaat aattgcaaaa agtgtcatta atataggaaa agtcatatta tacgcaacac
     2221 ccacaaatcc cgcatcactt aggccatgga aatgtgacgt tataaatttg ttgctctggt
     2281 taataatcca aaggctgatt gaagccacta caattggtat gccgtatgca aaaattgatt
     2341 ttatggtttt aaagtctggt ttttccagtc ttaaatacca gagcaaatct gtttgaaaaa
     2401 ccagcaatat atcaataata actatagaaa cagccatacc gatgaggata gcagctgctc
     2461 caaaatgcaa aaaatgtata aaataaacag cacaaagaat agtcaaaacc tgattaacta
     2521 ttgtagaaac cgtaaatgca ccgggtttta tctgtgcacg caacacctga aacaacaatg
     2581 ccctgacagc tacgggaata atcaaaagca gcacaaagag aaatatcttt ggcgggatat
     2641 taaagtattc ataaaaagca tgcctgaaag aaattgtaag aatatacatt acacaaagat
     2701 ttgagataag aatcataacc agtgtggaga tatattttgg tatttcatca cagagctgat
     2761 tctgcctgaa aaaccttaac ccggcaaggc ctatccaatc tgaaaagagt atacacaaaa
     2821 aactcagcac agccagagat attgcatata tcccgtattg agtcggtgcc agaagatttg
     2881 tatacacagg cacaatgatt gcattaccca aaagcccgaa tatttttgaa ggtgcagatt
     2941 ttgccatatc cttaaatata tgttttaaag gaagggccac ctcttgaata tatttatcaa
     3001 cctcttttgt caaaaaatcc acctttgaat aaaaaataat gaacaaatta tatcacaaat
     3061 cgttaatgta aacatagaga gtcttattat tgtataggtc tttcaaatag ccctgtaggg
     3121 ctaatgattt tgacaattta aaaaattaag ataataagag gatttaaaac ttccccttat
     3181 ttaataaaat attcagtaaa tagaaggttt ttttaagagt tgaacaaatt tcttcgtata
     3241 aaattgctat catcaatact ggtattgtcg tttgtgacag tacaaacctg cccttgtgct
     3301 tatgcatttt ctttaccatt caaaaaaaag aaaacagaaa aaattgaaca aacaaaagca
     3361 acaagtgccg tacaaatcaa agcagaaaaa aatgaaattg ttgaatactc tcttgaagac
     3421 tgtatagata tagcgctaaa aaatgaccct aacatcaaaa tttacacaac acaaaaaggt
     3481 attgcgcact ctcaactggg tattgcaaaa tcaggatatt ttccaaacat tacagcaagc
     3541 acaggtttta catctcaaca gaacagaaac tcgggctctg gcggaggctt ctacaatcaa
     3601 ggcggcagta cttcccgcag caacaactac taccagttga accttggagt aaaccagcta
     3661 atctgggact ttggcaaaac agttgcaaaa ataaacatgc aaaaatacaa caaagaatca
     3721 gtaggctatg accttgaaaa cactatttta aataccgtat acaatgtaaa acttgcctat
     3781 tataaagcgc ttgcagctct tgcaaaccag gatgtatatg agcgctcggt ccgtattaat
     3841 cagttgaatt atgacagaac aaatgctctt tttaaggagg gtcttaaatc taaaatagac
     3901 gtagtaaacg cacaggttta tctgacagat gcagaagttt ctttgattga tgcacaggga
     3961 aaatatgacg cagccatcat taacctgaac aatgcaatgt atctgactga tgcaccgtct
     4021 tataacataa aaaatacaga aagcttcaac ttcaaaagaa cacaaacatc aaaagacact
     4081 gtcaatattt cttatgtacc gaaaaaaagc ggctcaaaag agtacgagca aacagcggtt
     4141 ttgacatccg gcatagaaaa acaggatatt ttacaggatt acaaatttaa gccactcatt
     4201 ttgcctgtaa acgatgccat acaaaaagct tacgaaaaca gacctgattt aaaatcactt
     4261 ttgatggtag aaaaagttca gcaggaatca ttaaaagtca taagacgcca gtacatgcct
     4321 gttgtaagcc tgagcgcagg atacaattac agaagaaaca gcgaagtggc aaatacaggt
     4381 ttaaatattg gtgtcactgc tgatttgcct acactaaata ttatgggcgt aaaatacaat
     4441 gttgatcagg gtcatcagta tcttgagctg gcaagagaaa atataaattt atccaagaaa
     4501 aacatatact ttgaaataca aaataactat ataaatatgg ttgtactgca gcgaaaaatc
     4561 cctaaaatgg cagaaaaagt agaacaaaca ctggaaaact ttgagcttgc cgatggaaga
     4621 tatacagtgg gattgggcaa ctttattgag ctgcagcagg cacaaacaaa ttacaacaac
     4681 gcacagcttg cttttgtaca ggcagttttt gactacaatg tggcaaaaga gcagttccaa
     4741 aaatcaatgg gggtacgatg aaaaaacgta tattaatatc tatatcagca cttattgccg
     4801 ttgtttttgt cagtggattt gctttttatt tcaacaagca tcgagactca ggctatatta
     4861 cagtcccggc aaaagtagac acaattgttg aagccgtaga agcctcaggc actgtaaacc
     4921 ctgtaaacac cgttgatatt ggttcacagg tatcaggtat gataaaagat atttatgtgg
     4981 actacaactc aaaagttacc aaagggcaac tgcttgcaca aatagaccct tcgctttttc
     5041 aagcacaggt agacaaagca agaggcgacc tcgaagcagc gcgttccaac aaagccaaaa
     5101 ttcaggcaat gcttgtatat gacaaaaaaa attacgaaag atataaaaga ctgtacgaaa
     5161 aaaattatgt tgcaaaaagc gaccttgacc ttgcagaagc aacttacaaa tctgatttgg
     5221 cacagattgc agcagcacag ggcacaatta atcaggcaca ggcaacatta aacaataact
     5281 taacaaattt aaggtacaca aaaatagtct cccctgttga cggcattgtt gtttctcgtg
     5341 cggtagacgt cgggcagact gttgcagcaa gcttccagac acctacatta tttcaggttg
     5401 cacaggattt aaccaatatg caaattgaag ttaacgtatc tgaagcagat ataggtaaaa
     5461 ttaaaaaggg ccaggaagtg gaatatactt tagacggcta tgctgattcg gtgttccacg
     5521 gaaaagttac agaggtaaga atcgcgccta caacagtttc caacgttgta acttatacag
     5581 taattgttga tgtagacaat aaagaccaaa aaatgattcc cggtatgaca gctaacgcct
     5641 ctatcattac aaacaagagt gaaaacgtaa tttgtgtacc gacagacgct ctgaaattca
     5701 cccccaaaga gataaccggc gggaaaaaat acaaagagca ggggctgtgg atactcagaa
     5761 acaacaaacc cacaagaatc agcatagaaa caggtgcaaa agattctgac agaacagaga
     5821 ttatctcaaa agaattaaaa gaaaatgaca gagtaataat aagtaaaaaa ggcgataaag
     5881 ataaaacagc acagggcaaa cgaccgccta tgagaatgtt ctaaaatgtc aaatacggat
     5941 ttaatagtaa ttaaaaactt aataaaaacc tatgcaacag gtgatacatc ctttaatgcg
     6001 cttgatgatg tttcgttgag cgtaaaacaa ggcgagtttg ttgctatcat gggtgcatct
     6061 ggttcgggaa aatccacatt tatgaacgtt ctcgggtgtt tagacaaacc cacatcaggc
     6121 acatattttt tagacggtat tgatgtgagc aaaatgacaa tggacgagct ttccgcaata
     6181 cgtaacagaa aactggggtt cgtctttcag ggttttaatc ttatatcaag aacatcagcc
     6241 ttggaaaatg ttgaaatgcc gatgatttat aaaggaatcc ctccggaaga acgtataaaa
     6301 agagcaaaag ccgcactaaa aattgtaggg ctcgaaaaaa gagaaacaca tatgcctaac
     6361 cagatgtcag gcggccagca gcagcgtgtg gcaattgcac gtgcaatagt caacgacgcc
     6421 ccgattatac tggcagacga gcccacaggc aaccttgata caaaaacctc tatagaggta
     6481 atggagtttt ttgtaaaact aaacagtgct gcaggaaaaa caattgtgct tgtcacacac
     6541 gagcccgata ttgcagaata tgcaaaaagg gttgttacct tccgtgacgg aaaaataatc
     6601 agcgatgtct tgaatgaagc accaaaggga gcagccgcgc tatgatagat tttgaatcaa
     6661 catttaaaat atctctacgt tcgctttaca tcaacaaaat gcgctctatt ttgacaagcc
     6721 ttggcataat cattggtgtc agcgcagtta ttatcatgct ttcaatcgga gagggagcaa
     6781 aggaaagaat taataaagac atagcctcga tgggttctaa cctgctgatg gtactttccg
     6841 gctccacaac ttcaagcggg gtgagaatgg gaagcggaac acagcctaca ctcaccataa
     6901 aagattctga agctatgcta aaacgatgcc cgtcggttct tgaagttgca cctacagtcg
     6961 gacaggtgca gcagcttgtt tattcaaacc aaaactggtc tacaacagta aacggcataa
     7021 cacctggata tatgcccata cgtatgtggg aaattgaatc aggaagagga atctctcaag
     7081 anngacaaaa gttgcagtgc ttggttctac tgtcacaaca aacctttttg gtgacatgga
     7141 ccctattaac cgcacaatcc gtataggagg aatgcccttc aaagttattg gaattctaaa
     7201 atcaaaaggc caaaacggta tggggcaaga ccaggatgat actgttttaa taccgattac
     7261 cacagcacaa aaaaaactgt tcggtacaga ctttcccggt atggtaaaac atataagcgt
     7321 gcaggcaaaa gatgaagaca gccttgactc agcgcaagaa gagattacag aactcttaag
     7381 agaacgtcac aatctgggca agacaaaaga agacgatttt acaataagaa actttaccca
     7441 aatgctcgag accgcaaaac aggcttctaa cacaatggca attttactag gttctatagc
     7501 ctctgtttca ttactggtag gcggtatagg tattatgaac ataatgcttg tgtctgtaac
     7561 agaacgtaca aaagaaatcg gtatacgtat ggcaataggt gcaacagcaa tggatataag
     7621 gatacagttt cttgtagaag ctttattact gtctcttgcc ggcggattaa taggtgtaat
     7681 agtcggtgta ttaggatcca aaatcgtggg tctgttttca gatatgaccg ttataatttc
     7741 tggtgcacct atattgattt cctttggctt tgcagggctt gtggggattt tattcggtta
     7801 ttatcccgca tacaaggcat ctttgctcaa tcctatcgaa gctttgaggt atgaatagct
     7861 ctagtcaggc aatacagggc ctttgtattt gttatacagg ttcataacat catcgccgaa
     7921 tttttcacca ttgagcattc ttgcatacac ctctgcaaca aattccaaag gagaactttt
     7981 ggcatatcta gagactgttg aagcaataaa ctgttcttct ttgctttcca aaaatccttt
     8041 tgccagtgca ccgattttat caggttttcc tgtttgcttg ttataaacaa cgtgcatatc
     8101 ttcataatcc agtatagtat ttttatgatg gaacagatga ccttcttcgt ggtacaaagt
     8161 atcaaataca gagcgttttg aagcgagtat ttttgaagaa ggatgctgat taaaaggcag
     8221 tcctgtcaat gcatctgaag cctcaaagag ataatccacc tgttctttat tagtcatttt
     8281 tcccagttct tcaactgatt taaaagaccc ttgcttcatg tgttttttaa gcaaatcaac
     8341 aacgcctttt tgagaataaa tatcattgat tattgccata ggattagcat caagaacatt
     8401 actgtatgca taatagtcct taaatgattt atttaaagca acaatatcca ttttggacgc
     8461 ttctccgtta acaaattttg cagataacag cataatatct aattgcttgt ctttattgaa
     8521 aaaaggaaga ataggcattg caatatcatt accaccgtct tttcgaggtg tagctttaaa
     8581 tctaaaatct tttagcattt tatcaatgga tttatgggca ttgttaaaat aatcaacatt
     8641 tacaatcaat gttgagtcca tataaaagcc tttacctgcg cctgttctcn nnnnnatctt
     8701 ttaattcatc aggaacaggc attacctctt tagggatatg gcctttgcct ttgtatttat
     8761 tgtttatatt aacaaggcct tcatttaccc agtttgccaa atcaaggtca tttgctgtat
     8821 caaatttttc tatctttaaa tgtttttttg caaactcttt tgcctcttcc attgtttttg
     8881 caggcgtaaa atcaatatgt tcagccagct gtgttacaga ttttagtctg cctctgataa
     8941 tcagccctgc tgctgtaaca gccaatgcag cccctgctaa aataccccat ttttttgcac
     9001 tgttcttttt cttttcttca acttcaggag cttttgttgt aaaagaagtt gtatcctgtg
     9061 tcatagcagg cagcttaggt gcaatagaag gagcttgctg aaattgagaa gctgtatttg
     9121 tataattatt tacatnnnnn tttttggaat agagttcatt aaattgccga atgatacttg
     9181 cgacattatt acctaccttt aattttccta cgtatattta taaaattgat gagcttaaaa
     9241 taattgctat tatccctacc tatcctatcc tattaggaat tttacacgat ataactgaat
     9301 tacaggcaca aaaaactcat tttaacattt cttaatattt acaaattatt gtcacctact
     9361 ttttgatgtg agaaaataac gatataaaag gggtgataat aaatggcaaa aagattatta
     9421 gttgttgatg atgatgacga aatcagagag ttattggaat ttgacctttc gcacagcggt
     9481 tacagcgtag atacggcctg tgacggaatg gacggattga acaaagctgt tacaaactcc
     9541 tatgatcttg tactgcttga tgtaatgatg ccaaagatga acggttttga tgtttgcaaa
     9601 aacctgagaa aagcaaaacc agacattcct gtgctgttat tgactgcaaa aggcaccata
     9661 acagacaaaa cacagggctt tgactgcggg gcggatgatt accttgtaaa accgtttgat
     9721 atccaggaag ttttgctaag agtaaaagct cttttaagaa gaaatacgga ttcttccaac
     9781 agcgatacag cctttaaaca tgaaatactc aaaatgggag atattgagct attccctgaa
     9841 tcattagaaa caggcattga aggaaaacgc ataaaactta cacccactga atttgagatt
     9901 ttatactgtc ttatgcagca ttttaatgat tccgtatctc ttgctgtttt gcttgatgaa
     9961 gtatggggtt atgactctga tgaagatgtg aggatggtaa gagtccatgt tggggggcta
    10021 aggcaaaaaa ttgaagctga tacaaaaaat ccaaaatatt tgcacacggt cacaaatgtc
    10081 ggctacaagc tcacacctat tacaaacact acagacaacg gacaggaata atgaaaaacc
    10141 ctataaaatt taaacgttta aaaattgtag aacaaattat tcttgttctg ctgcttgcag
    10201 ttattgtgcc taccaccata agtgcaatta ttgttaacaa tatcaaccag cacgcagtaa
    10261 gaaacgaact gcaatattcg gccttgagca ttgcagaatc tattgcttct aatattgaaa
    10321 ctttttctga atctggagaa gacgaactca atcagatagt actggcgttg cgtcatattc
    10381 cgtcagaatt tggaaaagaa atatatctca aagatatttt aaacaattcc aacctgataa
    10441 cagaaatgta tcttgtaaaa aagcaggaca cagacaaata tataaaatgg gatgattact
    10501 ctgcatacaa caaagaaaat aaaaatatcg aaatttttca aaaaattgat aacaatttcg
    10561 ctgtaatggc caaagtagat gtaaaaatct ttgaaaagca ggtctttaat atttacagaa
    10621 aagacgacag acagatttat atcctcaaca aagacaacaa actcgttgct gctcacaatt
    10681 acaacgaaaa agactttaac agggtaacat atgctttgcc taaaaaattg gttatagaca
    10741 gacctgttat ttttggcaag gtaaaaaacc agcctcttgc ttatttcaag ctgtctgacc
    10801 ccgaaacaac aatcatagta aa
//
LOCUS       DABS01000222            3790 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_20807, whole genome shotgun sequence.
ACCESSION   DABS01000222 DABS01000000
VERSION     DABS01000222.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 3790)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 3790)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3790
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            complement(<1..839)
                     /locus_tag="CPT85_10220"
     CDS             complement(<1..839)
                     /locus_tag="CPT85_10220"
                     /inference="COORDINATES: protein motif:HMM:PF00361.18"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase"
                     /protein_id="DAB20360.1"
                     /translation="MIFLSTLTASMLLVVTCQNALMFLICWEIMSLSSFFLVIFENEK
                     KEILKAGIKYLVFMHISVIFIILAFALLSIKAGSFDFSSFRYVLENNQYLANIVFILA
                     FIGFGTKSGFVPFHNWLPDAHPAAPSHVSAVMSGVVIKTGIYGILRILSLIVIPSKLI
                     SFGVLIISLATALYGVLYSISQQDVKRFLAYCSIENIGIIGTGVGIGMLGLAYGCSIV
                     ALLGFSGAILHILNHSIFKEILFFAAGSVYTKAHTRDVEVLGGLIKAMPATAIFFLAS
                     SVAV"
     assembly_gap    887..888
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            993..1205
                     /locus_tag="CPT85_10225"
     CDS             993..1205
                     /locus_tag="CPT85_10225"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20361.1"
                     /translation="MKVSIIVQEFAITLTEGIQHNTAAIALRKVTILTXFIGKKQCKK
                     TACQKEDYPRKKNIHKIFHPKFIMFD"
     assembly_gap    1095..1096
                     /estimated_length=2
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            1488..2396
                     /locus_tag="CPT85_10230"
     CDS             1488..2396
                     /locus_tag="CPT85_10230"
                     /inference="COORDINATES: protein motif:HMM:PF01226.15"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FdhC protein"
                     /protein_id="DAB20362.1"
                     /translation="MANQTFDAKDCMTPNSVAHELAEQVMPAKANFRKSKTFVLAIAA
                     GALIAFGAQVSLTVMTGTAENLSWGIAKLVGAMTFATGLMMVVLTGAELFTGNVMMTF
                     SVIEKRTSFLKLLRNWTIVYIGNFVGSLLLALLIYYSGCSHNSHEALGVLSLTTAYQK
                     VNLTWVEAFTRGILCNWLVCLAIWMASSSRFVIGKIFAIFFPIMTFVASGYEHSIANM
                     FFLTNGLFAKHTASIVAASGLTAQQLATLNIKSIFTSNLIPVTIGNMVGAIVFVVLLF
                     WTAYLRDDHKSNNNDQNTEPDMEENK"
     gene            2498..3769
                     /locus_tag="CPT85_10235"
     CDS             2498..3769
                     /locus_tag="CPT85_10235"
                     /inference="COORDINATES: protein motif:HMM:PF07396.9"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20363.1"
                     /translation="MTTSLCACSQEVITLEPEVEHSFAQNILLSNVENTQEIPQPLIN
                     APKVEEPSPMELQEPLRSSITDYDPTQGAASSQFFLFNAIKKAAQDVYNLEIERTDVP
                     QALLKDYLTWKPETGPLESLHIWTAVQQNFSTTIPERGDTDSKFDVNLINVLIDGKFR
                     GGKENFRIMLDPTHRSSHMPFMEPFFQDLYVETTRIPHTSILVGNSRPGVGIEGAQSP
                     YTLAFINRSQISRNLANIRKFGVRVRGDYSLMDYDVGIYSSSTNFTAFFPGHEFDAWM
                     NIKPLGKTDGKYGKLVTGAGLQSGEKHGMSYYLTGAYAGYEYKKFWTKFEYARANGSN
                     GGSGLTDRRSQGLFWTVAYHVTKKLEILARYDQFDPDREIKNNNQREYTLGANYYLKG
                     QAMKLIFNYVYCQNDNKVDSHRLMMGTQFLL"
BASE COUNT         1267 a          700 c          698 g         1121 t
ORIGIN      
        1 accgcaacag aactggccag gaaaaatatt gcggttgccg gcatggcttt tatcaagcct
       61 ccgagcacct caacatctct tgtatgagct tttgtataaa cactacctgc tgcaaagaac
      121 agtatttctt taaatataga gtggtttaat atgtgaagaa ttgcaccgga aaaaccgagt
      181 aatgcaacaa tactgcagcc ataagccaga ccgagcattc cgatgccaac gccagtgcct
      241 ataataccaa tattttcaat actgcaataa gcaaggaatc tttttacatc ctgctggctt
      301 attgaataca aaacaccgta taaagctgtg gcgagtgata ttattaacac cccgaaagat
      361 ataagctttg aagggattac tattagcgaa agaatcctta aaattccgta aatacctgtt
      421 tttatcacta cacctgacat aacagcactc acatggctgg gtgctgcggg gtgtgcgtcc
      481 ggcaaccaat tatgaaaagg tacaaaaccc gactttgttc caaacccgat aaaagcaagt
      541 ataaatacaa tatttgcaag atattggttg ttttcaagaa catatctaaa cgaagagaaa
      601 tcaaaacttc cagctttaat tgaaagcagg gcaaaggcaa ggattataaa aattactgaa
      661 atatgcataa atacaaggta ttttatgcct gcttttaaaa tttctttttt ctcgttttca
      721 aatattacaa ggaaaaatga actcaatgac attatttccc agcaaatcaa aaacattaaa
      781 gcattttggc atgttactac aagaagcatt gacgcagtta atgtgctcaa aaatatcaaa
      841 tgagcaccaa cccgttttcc gctttctata taacctttta gataccnntg gcataaactg
      901 ttgatgccag gctcattacc gaaataacga gaataaaaaa tgcgctcagc gggtctatta
      961 caaaatttac cggtccaaaa atgtgattga agttgaaggt ttcaatcata gtacaagaat
     1021 ttgctattac tttgacagaa ggaatacagc ataatactgc tgctattgcg cttaggaaag
     1081 taacaatttt aactnnattt atcggcaaaa aacagtgcaa aaaaaccgct tgccaaaagg
     1141 aggattaccc ccggaaaaaa aatattcata aaatattcca tcccaaattt ataatgttcg
     1201 actaaatgtg tgtaacaaac cctgttttaa atctaacaaa ttagcatgtc aagaaaaaaa
     1261 ttaagaataa ttttttacaa atttttcttg taatttgaaa tttttagatt taaaattttt
     1321 ttgcactagc tcaaacaaaa atgaagttat tcaatttttg ttttaacaat ttaagattag
     1381 taagacgctt ttataacgcc tgatacgcca cgtgtttaca cctggcggat tgttagtatg
     1441 agttggatta gaatagtaga ttaaaacaca gccaaaagga gataaaaatg gctaatcaaa
     1501 catttgatgc aaaagactgc atgacaccaa acagtgttgc tcatgaactg gcagaacagg
     1561 ttatgcctgc caaagctaat tttagaaaat caaaaacatt tgtacttgct attgcagcag
     1621 gtgctttaat tgcattcggt gctcaagtat ctttaacagt tatgacaggc actgcagaaa
     1681 acctcagctg ggggattgct aaacttgtag gcgcgatgac tttcgccaca ggtttgatga
     1741 tggttgtttt aacaggtgca gaactcttta ccggtaacgt aatgatgact ttttctgtta
     1801 tcgaaaaaag aacaagcttt ttaaaacttt taagaaactg gacaattgtt tatatcggca
     1861 actttgtagg ctcattgctg cttgctttgc tgatttatta ctccggttgt tctcacaact
     1921 ctcacgaagc tcttggtgtt ttgagtctta caactgctta tcaaaaagtt aaccttacat
     1981 gggtggaagc tttcacaaga ggtatacttt gtaactggtt agtatgtctt gctatatgga
     2041 tggcttcttc atcaagattt gttataggaa aaatctttgc aatattcttc cctattatga
     2101 cattcgttgc ttccggatat gagcacagta ttgcaaacat gttcttttta actaacggtt
     2161 tgtttgcaaa acatactgct tcaattgttg ctgcatcagg attaacagca caacagcttg
     2221 ccactttgaa tataaaatca atttttacaa gcaaccttat tcctgtaact atcggtaata
     2281 tggtaggtgc aattgtattt gtcgttcttt tgttctggac agcttattta agagatgacc
     2341 ataaatcaaa caacaatgac caaaatacag aacctgatat ggaagaaaat aaatagtata
     2401 aaaataaaag aggtgaaata tatttcacct cttttttagt taataatata atattaataa
     2461 cgtgaaaaag attttatttt ttttagcttt tatatatatg acaacttctt tatgtgcttg
     2521 ctcacaggaa gttattacgc ttgagcccga ggttgaacat tcttttgccc aaaatattct
     2581 gttgagcaat gttgaaaata cacaagaaat tccgcagcct ttaataaatg caccaaaggt
     2641 agaagaaccc tctccaatgg agctgcaaga gcctttaaga agctcaatta cagattacga
     2701 tcccacacag ggcgctgcgt cttcccagtt ctttttgttc aatgcaataa aaaaggccgc
     2761 ccaagatgta tacaatctgg aaattgaaag aactgacgta cctcaggctt tgttaaaaga
     2821 ttatttaacc tggaaacctg agacaggacc gcttgaaagt ttgcacattt ggacagctgt
     2881 tcagcagaat ttttctacta caatacctga aagaggcgat accgattcca aatttgatgt
     2941 aaaccttata aatgttctga ttgatggtaa atttagaggc ggaaaagaaa acttcagaat
     3001 aatgcttgac cccacccaca gaagcagcca tatgccgttt atggaacctt tttttcagga
     3061 tttgtacgta gaaaccacaa gaattccaca tacaagtata ttagtgggta attccagacc
     3121 cggtgtgggt attgaaggcg ctcaatcacc ttatacactg gcttttatta acaggtcgca
     3181 aatttcaaga aatcttgcca atatccgtaa attcggggtc agagtaagag gggattattc
     3241 cctgatggat tatgatgtgg gcatttacag ctcctcaaca aactttaccg cattttttcc
     3301 gggccacgaa tttgatgctt ggatgaatat aaaaccgctt ggaaaaactg acggcaaata
     3361 cggaaaactc gttacaggcg ccggtcttca gtcaggtgaa aagcacggta tgagctatta
     3421 tctcacaggt gcttatgcgg gatatgaata caaaaaattc tggacaaagt ttgaatacgc
     3481 aagagctaac ggctcaaacg gcggctctgg tctgacagat aggcgctcgc aggggttatt
     3541 ctggactgtt gcgtatcatg tcaccaaaaa actggaaatc cttgccagat atgaccagtt
     3601 tgatcctgac agagaaataa aaaataacaa tcaaagagaa tatactctcg gggcaaacta
     3661 ctatttaaaa ggtcaggcta tgaagcttat tttcaactat gtctactgtc aaaatgacaa
     3721 caaagtcgac tctcacaggc tgatgatggg aacccagttt ttgttatagc ttttaccagt
     3781 ttggatggta
//
LOCUS       DABS01000223            7245 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_3640, whole genome shotgun sequence.
ACCESSION   DABS01000223 DABS01000000
VERSION     DABS01000223.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 7245)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 7245)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7245
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            79..1380
                     /locus_tag="CPT85_10240"
                     /pseudo
     CDS             79..1380
                     /locus_tag="CPT85_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004221248.1"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
     assembly_gap    174..191
                     /estimated_length=18
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            complement(1405..2121)
                     /locus_tag="CPT85_10245"
     CDS             complement(1405..2121)
                     /locus_tag="CPT85_10245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015132423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quercetin 2,3-dioxygenase"
                     /protein_id="DAB20350.1"
                     /translation="MFKLRAREERGKTLTDWLDSSHSFSFAQYFDPFNMGFSDLRVIN
                     DDIVAPDGGFKLHPHANMEIISIILSGELEHKDSMGVSQILHPGHVQVMSAGSGIMHS
                     EFTPSSVNFLHFLQIWILPHKKNFDPSYSSKEFSKDKMHNRLCLIVSGSGERGSLKIH
                     QDAEIYQCIIDADKTVFYDLPENRKQWIQVAKGAIEVNSNILEAGDGMSIVNEHGELE
                     ITGVDDESNFVLFNLRNLTL"
     gene            complement(2247..3011)
                     /locus_tag="CPT85_10250"
     CDS             complement(2247..3011)
                     /locus_tag="CPT85_10250"
                     /inference="COORDINATES: protein motif:HMM:PF05704.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20351.1"
                     /translation="MHSKTKKIFTFLEFDENVQMPAYIYLCLKTWQKYLKNDYKIVIL
                     NSKNIEKFISKSLLPDISKLKQRYPFPRFCDYIAALVLYENGGIFLDADTIITEKFKD
                     EEVLYYHCDTVLYSNSLFNVCPGFMKANKGSLFMEELIRRYRFDTHLPMAFDPHRNYI
                     INDVIKYFDKEHITLIDSEKSGYCMEKAMYGVWDDYLYQNYYFSSLDSIEDFLKTTRG
                     ITALRNSVTNKRYKEMDVDEFLSMNFLLAKIFKVIL"
     gene            3232..3891
                     /locus_tag="CPT85_10255"
     CDS             3232..3891
                     /locus_tag="CPT85_10255"
                     /inference="COORDINATES: protein motif:HMM:PF12844.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="DAB20352.1"
                     /translation="MTNFKLGVGHNLKLIRKAKGITQEDLASIIGIHPRQLSKIETGE
                     HFPSCKTLEKACIALDIEPQTLFDFDFLVDSNEGAMTGTDNAAVFQVTKSSKENVYEM
                     FPKSSDTDSKPKTCTDKTMASTAKALNRPVFVEYFEDKKTSKIVVFYPDGKEKVIMNS
                     VDVEAKQNLNYMMKEFKKIAKDKAATQFIKLALESLGNDAALKKLDNLVEGMKLARGI
                     D"
     gene            complement(3893..6472)
                     /locus_tag="CPT85_10260"
                     /pseudo
     CDS             complement(3893..6472)
                     /locus_tag="CPT85_10260"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00488.19,HMM:PF01624.18,HMM:PF05192.16"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
     assembly_gap    5965..6011
                     /estimated_length=47
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            6608..6683
                     /locus_tag="CPT85_10265"
     tRNA            6608..6683
                     /locus_tag="CPT85_10265"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:6642..6644,aa:Glu,seq:ttc)
BASE COUNT         2130 a         1472 c         1311 g         2267 t
ORIGIN      
        1 taccaagtca atgaatcttg aagtattata aacataatat tcatgttatc ctgattggag
       61 caaggaaaag agagaaccat ggatatatta tttaaccccg taatcgtttc tgtagtagta
      121 ctttgtgcgt tatgcgtttt taggataaac gtgcttttgg caataatatt ttcnnnnnnn
      181 nnnnnnnnnn naataaacga cataatgagc acatttatct cgggaatggg aggcaactcg
      241 gaaactgccc tgagttatat actgctcggg gcttttgctg cagctatgac acatacgggg
      301 ctggctcctg tgcttgcaaa aaaaatcgca aacataatta aaggcagagc ctttatgctg
      361 attttgataa ttacaattat tgcaatgatg tcgcaaaacc tcatacccgt acacattgca
      421 tttatcccca tcttaattcc gcctttgctg caccttatga acaaactcaa aatcgataga
      481 cgcgcagtag catgtgctct tgcgttcgga cttaagacac cgtatatagc aataccagcg
      541 ggtttcgggc tgatttttca aggattgatt gcagacaacc tcacacaaaa cggaatgcaa
      601 atagctgtag gcgatatctg gaaatcaaac tggtttcttg ctcttgcaat gctcacaggg
      661 cttttgattg ccgtatttgt cacttacaga aaaccgcgtg aatataaaga tatacaaata
      721 agcgaagata ctgcaataca ggatgaagag cagtcgctca aattcacaaa aagccactat
      781 ctgacacttg ttgcagcatt tgccaccctt ggcgtgcagc tgtggacaaa ctcgcttccg
      841 ttaggggcgc ttgtcgggct ggcagtgatt tttggtacag gtgcaattga ccacaaaaaa
      901 atggacaagt tgatgaatga aggcattgga cttatgggct atgttgcttt tgtaatgctt
      961 gttgcagcag gatttgcact tgtgctgaag caaacaggcg gaatagaatc acttgttcag
     1021 gcagcatccg tatttatggg aggaagcaga ctgctggctg caactataat gcttgccata
     1081 ggccttttta tcacaatggg aatcggcaca tcttttggta caattccgat tctggctgta
     1141 ttgtttgtgc ctgtttgcgc aaaaataggc ctgagcatac cggccacagt gatactgctc
     1201 tcggcagcag cagcgcttgg agatgccggc tcgccggctt ctgacacaac ccttggccct
     1261 actgccggat tgaatgctga cggacagcac aaccatatca cagacacctg tatcccgaca
     1321 tttttacact acaacatacc gcttattata tttgcagtca ttgcggtgta tatattctaa
     1381 tccggtgccc ctgtgtcatc ttttttacag cgtaaggttt cttaaattaa acagcacaaa
     1441 gttagactca tcgtccacgc cggtaatctc aagctcgcca tgttcattca caatagacat
     1501 gccgtctcct gcttccagga tattagagtt aacttctatt gcgccttttg caacctgtat
     1561 ccattgtttt ctattttctg gcaaatcata gaacactgtt ttatccgcat caataatgca
     1621 ttgataaatt tcagcatcct gatggatttt taaagagcct cgttcaccgc ttccggacac
     1681 aatcaggcag agcctgttgt gcattttgtc tttggaaaat tcttttgaag aatatgaagg
     1741 gtcaaaattc tttttgtgcg gtaaaatcca tatctgtaaa aaatgtaaga aattgacaga
     1801 tgacggagta aactcgctgt gcatgatgcc agaacctgca ctcattacct gaacatgtcc
     1861 cgggtgaagg atttgcgaca cacccataga atccttatgt tccagttctc ctgaaagtat
     1921 aatgcttatt atctccatat tggcatgggg atggagctta aaaccgccgt caggggcaac
     1981 tatatcatca tttataaccc taaggtcgct aaaacccata ttaaacgggt caaaatactg
     2041 tgcaaaagaa aaagaatgtg agctatccag ccagtctgtg agcgtttttc cgcgttcttc
     2101 tctcgctctc aatttaaaca tattattatc ctttttgtgt attcatacaa aaaggagtat
     2161 aaaatttcag catcactctt tacagagctc aaaggctata tcaaaagagc aattacaaaa
     2221 atgctaaaaa tatttagcaa agtttgctac aaaatcacct taaaaatttt tgccagcaaa
     2281 aaattcatgc ttaaaaactc atcaacatcc atttccttat atcttttgtt tgtaaccgag
     2341 ttcctaagag cggtaatacc tcttgtagtt ttcaaaaaat cttctatcga atcaagtgaa
     2401 gaaaaataat agttttgata taaataatca tcccagacgc catacattgc cttttccatg
     2461 caataacctg atttttcact atctatcagt gtaatgtgtt ctttgtcaaa atatttgatg
     2521 acatcattga ttatgtaatt gcgatgcggg tcaaaagcca ttggcagatg agtatcaaac
     2581 ctgtagcgtc tgataagctc ttccataaac aaagagcctt tatttgcttt cataaacccg
     2641 ggacacacat tgaaaagaga gtttgaatac aaaaccgtat cgcagtggta atacaagacc
     2701 tcttcatctt taaacttttc ggtaatgatt gtgtctgcat ctaaaaaaat ccccccgttt
     2761 tcgtatagca caagcgctgc aatataatca caaaagcggg ggaaagggta tctctgttta
     2821 agtttagaga tatcgggtaa taaagacttt gatataaatt tttcaatatt tttgctattt
     2881 aaaattacaa ttttgtaatc attttttaaa tatttctgcc atgtttttaa acagagataa
     2941 atatacgcag gcatctgtac gttttcatca aattcaagaa aagtaaaaat tttttttgtc
     3001 ttagagtgca ttttttgatc cgaatacgat ttctccacaa acttgtcaaa aagtacgcct
     3061 aaaaagaatc gccgctattt tgaaaacaca aatccaatgt taaacattgt ccatttttac
     3121 atgatatgtc gtaaaacgcg taagtcaata gaaaattttg aaatttattc acgttaaaca
     3181 acgttacgtt acacctcaaa tacttataca ctaaaacgaa aggacgtgtt tatgacaaac
     3241 ttcaaactcg gcgttggcca caacttaaaa cttattagaa aagcaaaagg cattactcaa
     3301 gaagaccttg ccagcattat cggtatccac ccgagacaac tttctaaaat agaaacaggt
     3361 gagcattttc cttcttgcaa aactcttgaa aaagcttgca ttgctctgga tattgaacct
     3421 cagactttgt ttgactttga ttttctggtt gacagcaacg aaggtgcaat gacaggcaca
     3481 gacaatgctg ctgtttttca ggtaacaaaa tcctctaaag aaaatgtcta tgaaatgttc
     3541 ccgaaaagtt cagacactga ttcaaaaccc aaaacctgta ctgacaaaac aatggccagc
     3601 acagcaaaag ctttgaacag acccgtgttt gtagaatatt ttgaagataa aaagacctcc
     3661 aagattgtgg tgttttatcc tgacggaaaa gaaaaagtaa tcatgaattc tgttgacgtt
     3721 gaggcaaagc aaaaccttaa ctacatgatg aaagaattta agaaaatcgc caaggacaaa
     3781 gctgcaacac aatttatcaa acttgcgcta gaatcactgg gcaacgacgc tgctttgaag
     3841 aaattggaca atcttgtcga aggtatgaaa ctggctcgcg gtatagacta atttagtctt
     3901 tatccccaaa aaccagagat aattgtggca catcaggcgt aggaactttg ctcttacgct
     3961 tgtttgctga caggtctttt gaataatcaa tctgcatttt ggtcatcata tcttcggctg
     4021 tttttattac agcacgcggg agtccggcca tttttgcaac ctgtatgccg tagctcttgc
     4081 tggctgaacc ctctattact tttcttaaaa agattatgtc accgtcattt tcagagattg
     4141 tgaccctgta attttttatc tgcgggaaaa gcgaactcat tacattaagc tcgtgatagt
     4201 gagtagcaaa aatggttctt gccttgatat ttgtagctat atattccgca acgctccacg
     4261 caatagctac accgtcatag gtgcttgttc ctctgcctat ttcatccagc aaaataaggc
     4321 ttttttctgt tgcagagttt aggataaaag cagtctcatt catctcaacc ataaatgttg
     4381 actggcccaa agataaatca tccactgccc ctacacgggt aaagatttta tccactatac
     4441 ctatttttgc agcatcagca gggacatagc ttcctatctg cgcaagaatt acaataagag
     4501 cattttgtct catatatgta gatttacctg ccatgtttgg tcctgtcagc accataaact
     4561 gcgcatctgt ttcactgtgg ttgtctgcaa ttagctttaa atcattggaa acatacttgc
     4621 ccataggcag gattttttcc agcacggggt gtctgccctc ttttatatca agctcgtttg
     4681 agtccgtaac aagcggacgc acatatttgt tttctatagc gcacaccgca aacgaaacca
     4741 aaacatcaat atcagccaga gcctcggcaa cttctcttac gctgtccaca aactcttttg
     4801 aatactctct taagtcagag aaaattttgg tctcaagctc aatagatttt gtctgagcag
     4861 acaaaacatc cgactcatgg tttttgagct cttctgttat aaacctttct ccgttagtaa
     4921 gagtctggcg tctgatataa tggtcaggca ccattgacag gttggagttt gaaacttcaa
     4981 taaaatatcc gaatgttttt gaaaaaccaa cttttaaaaa cttgatgcct gtttcttctt
     5041 tttgtttctc ttcaaattcg acaagccatt ttttgccgcc tgttaaaagc tccctgtaat
     5101 aatccagatc accggaaaca ccctctttga taacgttgcc gtctttaaca acaataggcg
     5161 cctcatcgga aattgttctg tctattacat tagcaaattc aagcagactg tttctttcca
     5221 ttgcaagttt tgtcaaaagt tttgaattaa agctagccag aacctcgcta aactggggca
     5281 aaaggttgac agtgtctctc aatgccaaaa aatctcgcgg gtttgctgta ttattgctta
     5341 ttcttgtaga aagccgctga atgtcataaa ctttttccaa aagtcctatc aactggattc
     5401 ttgaagaggt atttttaatc agctcctcaa cagcatcttg cctttccaca atttttgaaa
     5461 catttttaag aggctggtga atccattttt tcagctgtct tgcacccatg tttgtttcag
     5521 ttttatcaat tgcccacaaa agactgccgt attttgcctt gtcacgggaa gtttcagtta
     5581 actcaagatt gcgtcttgta ttggagtcaa tcgacacata ctgggtgagg ctgtaggtat
     5641 caattctttc gaatttggga aaattttcct tttgagttct aaaaaggtac tcaaatattg
     5701 cgccggcagc gcaaaaacct gctttaaact ccgaaaagcc aaacgcgtct gtggattcta
     5761 ctttaaaaat ttctttaata tttttttctg ccctatcctc atcaaaagcc atgtagctca
     5821 tttttgaaca gttatagttt tcagtgattt cttcaggcag gtcaattttt tcatcaccta
     5881 caatttgaaa gggcagtact ttttgagaaa tctttggcac tacaacttcc gacggcttga
     5941 ttcttgaaag ttcactcaaa agctnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     6001 nnnnnnnnnn naacatgcct gactttttat ctttgaaaac tgcagcgagg tagttgttca
     6061 tgtttgattt taaaaggctt gtctctgtga gagtacctgc tgtgatagtt tttataacat
     6121 ctcttttaac aagccccttt gcctgtgcgg ggtcttccag ctgctcgcag atagaaattt
     6181 tgtgaccttt ttcaagaagc tttgggagat agttatccac ggctttggca ggaattccgg
     6241 ccatcggaat acggccaaga gcgccgcctt ctctacttgt gagtgtgatt tccaaatctt
     6301 ttgacaatgt aagtgcatct tcaaaaaaag tttcgtaaaa atcacccata cgataaagca
     6361 aaagaacatc aagattgttc tttttgattt ccaaaaactg tttcagcata ggtgaagcgt
     6421 cattaatatc aacgtctacg ctgtttatat aattaatttc cgattttgcc atattctatt
     6481 tatgccccct cgcttataca agaaatttac tataaataac agtgtttttc aaatctgtaa
     6541 acaaaaatgt aaacaatttg ttgacattaa attatgtctt cgatatatta tttttacaaa
     6601 ccgataggct cccatcgtct agaggcctag gacacatccc tttcacggat gcgacagggg
     6661 ttcaaatccc cttgggagta ccatttcatt ataagaagcc ataaaggctt ctttttttgt
     6721 gaatatattt gccatcccga tggttcgaaa actttctaaa tcgtatgtta atccttgagg
     6781 aaagattaat ctttgtaacc gctgctttaa atccaacgaa ccattagccc acatcttgtc
     6841 tacatcagct attacactga aagcgtaatc aacatatgcg ttaaaatctt cttctaaagg
     6901 cggggtttga aaaagttctt ctcgtatttc tttaatagtg ttctcaagca gcgctgattt
     6961 gcatctgtag tcgacttctg atactttttc atccatatac atatcgagaa gtttatcctt
     7021 gcgctcttga gcctgtgaga gacgtctgtt taaacaatct atgtgggatt tgtgttcttt
     7081 tgtattcatt ttaaagacat ctttaagaac agctttgtac agctttagta aatgaggttc
     7141 aggcttgatt gttttcaggt actcaggaaa tattttattt actatgtcag ctcttactct
     7201 tagtttgcag gaacaatctt tattgtagca gtgataataa ggaaa
//
LOCUS       DABS01000224            8801 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_11277, whole genome shotgun sequence.
ACCESSION   DABS01000224 DABS01000000
VERSION     DABS01000224.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8801)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8801)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8801
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            15..539
                     /locus_tag="CPT85_10270"
     CDS             15..539
                     /locus_tag="CPT85_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013256550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="DAB20332.1"
                     /translation="MLFSAFIGTYNNLQVMDENVNSNWAQVDNQLKRRNDLIPNLVAT
                     VKGYAAHEKAVFTQIAEARAKLGGAMNKNDMKGIQQGNSDLSNALSRLLLVVERYPEL
                     KADKQFINLQDELAGTENRLAVARKDYNDSVQLLNARIRTFPTSIIAGIIGIKAREYF
                     NTPEADKAVPAVQF"
     assembly_gap    720..729
                     /estimated_length=10
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            743..1936
                     /locus_tag="CPT85_10275"
     CDS             743..1936
                     /locus_tag="CPT85_10275"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20325.1"
                     /translation="MIGATALAGVVALGIIGHRNNWWTNAKKVVQQESVKNSAEAAAQ
                     PVKKTSKNPNKTIKETNPTQRTINKINAELSKETKHAKRALRQYNEIYTEFNEVCYKH
                     GSDYVKYLKENKIPFEAGKDGIRVFDKEGKLTRIIKGLDTDNKISQTYIEYYDKNGKL
                     AKIVSFVDNTPSLHFYDNNGNLSKRIVPISKIGGTRPSVMTAEFKNNRLTKEAIYIQP
                     MDNNYDNALVLKVINHKKATEYGAISVGSKDKYAILSNKRYELYDGNELKEIQHHTNG
                     TIIVNDSFNSYRYYLFNSNNEIVRTKELMPGWFEHITLDSKTGNKSSGLSLKNGKLDD
                     YIEYDPNNGQPTRKIFEAFDDETMFMDIPFINGKGDMAQAKYIKKSDFDVAPFLERYK
                     LEHIK"
     assembly_gap    1989..2005
                     /estimated_length=17
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            2257..2337
                     /locus_tag="CPT85_10280"
     tRNA            2257..2337
                     /locus_tag="CPT85_10280"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:2290..2292,aa:Leu,seq:cag)
     gene            2414..2498
                     /locus_tag="CPT85_10285"
     tRNA            2414..2498
                     /locus_tag="CPT85_10285"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:1.23"
                     /anticodon=(pos:2448..2450,aa:Leu,seq:gag)
     gene            complement(2592..3671)
                     /locus_tag="CPT85_10290"
     CDS             complement(2592..3671)
                     /locus_tag="CPT85_10290"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20326.1"
                     /translation="MPISKPTSINSNTNQINQCSKDGKGISTGVKVAIATSLVALASY
                     GIYAVTRGKVKPKTAPITGNNTSVQEIKELSVNAFKEIGRFNKGRAVLADGTNYTGKI
                     VSEPKDGSKFVMEYLDGVLQKSTKIKGEETVFEKTYKYSDELGLVNVIKNKSSVLKKF
                     VDEAGNLNIVTSKHHNVIDKSTGLIRRDCRFIDKHNNISGSFETPYCIRSREGGINYP
                     LKIKGTEVQTAFLDPMSGGVGNLEKGECNLVWNYRGRKNDGDNVFHIDTIYRFNSSGK
                     SMRNIDLYGRYGKYKKLDFDFKSGFVTNGESPLFKYNYKTNEITDLKIDKNEAEELVN
                     FAKEQYGLYQKAQKARLREYKAGIC"
     gene            complement(3893..4675)
                     /locus_tag="CPT85_10295"
     CDS             complement(3893..4675)
                     /locus_tag="CPT85_10295"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20327.1"
                     /translation="MIRTALYQVGKNWAVGARDKSMLLAQEAQQVLAKTSERVSKPKF
                     TFGPKSPAALSKVSATEALSSQNKTFHFGTSKVSKMSFGTPKCDTEYIKHLNAKIPNI
                     AMARKDFFSATGLQLHSPTTEDLRSFVGGLKNIECGVKGKGMLACNYPREAVKLALPQ
                     KVKHVLIGHGCGATETNNWVFYQNGENILNYINKNIPKGEQVIVLCCETGKQNVTKLG
                     IGTTVSTLLTDIRNPAKIVESGRNEIIGEFVLPPYGNGVVYY"
     gene            complement(4867..5838)
                     /locus_tag="CPT85_10300"
     CDS             complement(4867..5838)
                     /locus_tag="CPT85_10300"
                     /inference="COORDINATES: protein motif:HMM:PF13673.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20328.1"
                     /translation="MFYKTCYSSPIGIITLASDGKNLVGVWLEGQKYFCATVDEKMLE
                     NNSLKVFCDTKNWLDRYFKGEQPQIKELPLAPKGNEFRQAVWQLLCEIPYGKLTTYGE
                     LAKKIAKQTGRSTMSAQAVGGAVGHNPISIIIPCHRVVGTNGSLTGYAGGIETKIKLL
                     KHEKIDMTKLFIPPKNITVNIAKNKRTQKLIEQLINVWESSVKATHVFLSESEIENIK
                     KYVPQALKEVEYLTIITDDNNIPLAFMGIENNRLEMLFVNANERGKGFGTKLIKYGIK
                     KYSINELTVNGQNPDALRFYEKNGFKVYKRTETDEQDNPYPLLYMKL"
     gene            5974..6810
                     /locus_tag="CPT85_10305"
     CDS             5974..6810
                     /locus_tag="CPT85_10305"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20329.1"
                     /translation="MANIVKVTQKNLYNMLARHNSRLIRRQTQLPDFSNLYDHKLTEF
                     EYKKLSDIIRTKGSCLKALNNGKKLYKLETQQGTLLAKVKNKEVTQVSFPGFFSQNDV
                     NKFNYKNGESRTQYIKRTTDFEKDETKILFHSTHYYPNGNGWRDSLTGKPPKEYMDKN
                     YTTIKSRRETWLTNGGNSSELVQSVTADGKVQHNIARRYEWVKTIDENKYVSSNLDGT
                     YSIFHNGKKMQGTALKDKDGALMGFRIENQTFLPAELMKILHLPEKWGNEIAKAYIKL
                     LS"
     gene            6841..7350
                     /locus_tag="CPT85_10310"
     CDS             6841..7350
                     /locus_tag="CPT85_10310"
                     /inference="COORDINATES: protein motif:HMM:PF03551.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="DAB20330.1"
                     /translation="MIELLILYSLKKRERTLYSLRSDIFEKFGYFTKPSTGTIHPALK
                     RLLKSNVITIRNDFSSGGKKSTYYGLALHWQKKFNDLFFTPLSENPTIFFKEIQSRIA
                     VMSLLENDLKETFIKDILIRLESFMLDLQNALDDEYASYDKYQLALLKKNIADINSYK
                     TFINELEAQ"
     gene            7350..8648
                     /locus_tag="CPT85_10315"
     CDS             7350..8648
                     /locus_tag="CPT85_10315"
                     /inference="COORDINATES: protein motif:HMM:PF04459.10"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20331.1"
                     /translation="MPAIVSEVLENSIAQELEIEKGDKIISINNEKPQDMIDYRYMMC
                     SEEIELEIEKTNGETEIYEIEKDFDEDLGVVFESAVFDRIKPCTNRCIFCFVDQQPEG
                     LRKSLYIKDDDYRLSYLQGTYVTLTNLTQKDRERIEKLHLGPLYVSVHTTNPELRVKM
                     LSNPRAANIIEDLKWLKKADIPIHAQIVLCPGYNDGQELERTLSDFAKFKSIIESVAI
                     VPVGITKFHQNGLKTLTKSNALHVIKQVEEFNKKVKKQLAMASDEFFLKADYPVPEKK
                     YYGNFAQIEDGVGALRLLMDDFEKNRKKIPLSVKKPKEIIFATTPSAAKLVGCIADEL
                     NKVKNLQCSVIELKNNFFGDNVIVAGLITGNDLICQLKEKSKELNIKNVIIPSIMLRP
                     FTEDFLDNVTLKEVEQALECKVFPIKDIYSAREIIDIIKS"
BASE COUNT         3020 a         1508 c         1540 g         2706 t
ORIGIN      
        1 tagtgcttgt tgtgatgttg tttagtgcat ttattggtac atacaacaat ttgcaggtaa
       61 tggatgaaaa cgttaactct aactgggcgc aggtagacaa ccagctgaaa aggcgtaatg
      121 atttgatacc gaatttggtt gcaactgtaa aaggttatgc agcgcatgaa aaagctgtat
      181 ttactcaaat agccgaagct cgtgcaaagc tgggcggagc aatgaacaaa aacgatatga
      241 aaggcataca gcagggtaac agcgaccttt ctaatgcttt atcaaggctg cttttggttg
      301 tggaaagata tcctgagctc aaagccgaca aacagtttat caatctgcaa gacgagctgg
      361 caggaaccga aaacaggctg gctgtagcaa gaaaagatta caacgacagt gtacaactgt
      421 taaatgcgag aattagaaca ttcccaacat caattattgc cggcataatc ggtataaagg
      481 cacgagagta ctttaacaca ccggaagcag acaaagcagt accagctgta caattttagg
      541 actgtaatat atatttaata tttcttaaaa atttagcaac tattgttaag cctacgtttt
      601 tatatgtata ggtaacaata gtgtaggaaa attatgccaa ttaacagtac aggttttata
      661 aaaattccgc aagattatgc aattaaacct gttcaaaaga aagacgaaga atctaagcan
      721 nnnnnnnnng tctgcaaaat acatgattgg agcaacagca cttgctggtg ttgttgcact
      781 gggaataatc gggcatagaa acaactggtg gacaaacgcc aaaaaagttg tgcaacagga
      841 gtcagttaaa aattcagcag aagcagcagc acaacctgtc aaaaaaactt caaaaaatcc
      901 aaacaaaaca ataaaggaaa caaacccaac tcaaagaaca attaacaaaa taaatgccga
      961 attgtcaaag gaaaccaaac atgcaaaaag agcacttcga caatacaatg aaatttatac
     1021 agaattcaat gaagtatgct acaaacacgg aagcgattat gtaaaatatc ttaaggaaaa
     1081 taaaattcct tttgaagcag gcaaagatgg cataagagtg tttgacaaag aaggaaaatt
     1141 aacaagaata ataaaaggtt tggatacaga caacaaaata tctcagactt atatcgaata
     1201 ttatgataaa aacggcaaat tagctaaaat agtttctttt gttgataata ctccaagtct
     1261 tcatttttat gacaataatg gtaatttgag caagagaatt gttccgatat ctaaaatcgg
     1321 aggaaccaga ccgagtgtca tgacagccga atttaaaaat aatcgcctga caaaagaagc
     1381 tatctacatt cagccgatgg acaacaacta tgacaatgca ttggttttaa aagtcattaa
     1441 tcataagaaa gcgacagaat acggtgctat cagtgtaggt tcaaaagaca aatacgcaat
     1501 tttatcaaac aaaagatacg aactctatga cggtaatgaa ttgaaagaga tacaacatca
     1561 tacaaacgga actattattg tcaatgatag tttcaatagt tatagatatt atttgtttaa
     1621 ctcaaataat gaaatagtca gaacaaaaga actaatgccc ggatggtttg agcacattac
     1681 attagacagc aaaaccggta ataaatcaag cggtttgtcg ttaaaaaatg gcaagttaga
     1741 tgattatata gaatacgacc caaataatgg ccaacccaca agaaaaattt ttgaagcttt
     1801 tgatgatgaa acaatgttca tggacattcc atttatcaat ggtaaaggtg atatggcaca
     1861 agctaaatat attaagaaat ctgattttga cgttgctccg tttttggaaa gatataagtt
     1921 agagcatatt aaataaaaag ctatcaatat atatttttgt ataaaattct attgcaaaaa
     1981 tctgatgtnn nnnnnnnnnn nnnnnagccg atgtggcact ctgccgaaaa aaacgattga
     2041 gtatcgtttt ttgagagggt atgaacgaat gtgaatacat tcggcacgga ggcgcaaata
     2101 ttgaacttta taaactaaat tggactttgc cgatgtggca ggaaccgaaa aacggtaaac
     2161 tgcttgcaaa aacaattaag tattgttttt gcctaacata gcagaacgca gcgtagctgc
     2221 ttcgccacaa agggattgtt tttgacaact taaaatgccg atgtggcgaa atggtagacg
     2281 cacacgcttc aggtgcgtgc gaggaaactc atgggggttc gagtcccttc atcggcaaat
     2341 cttttacaaa aaatatgttt atgataatat atttttgttg aaaatttgac aatagaataa
     2401 ctaaaatacc tgtgtcgacg tggcggaatc ggtatacgcg cacgtttgag gggcgtgtgg
     2461 ggaaacccgt gcgggttcaa gtcccgccgt cgacaccata aaaagatgat aacttttgtt
     2521 atcatttttt ttattcgtta attaagtact caagttgcat cttacattga ttagctaaat
     2581 atttacatta actaacaaat accagctttg tattctctta atcttgcctt ttgggctttc
     2641 tgataaagtc catattgctc ttttgcaaaa ttgaccagtt cttctgcttc attcttatca
     2701 atttttaaat cagttatttc attagttttg taattatatt taaacaatgg agattctccg
     2761 tttgttacga atccagattt aaagtcaaag tctaattttt tatatttacc ataacggcca
     2821 tacaaatcaa tatttctcat agatttacca gaactattaa aacgatagat tgtgtcaatg
     2881 tgaaaaacgt tatctccatc gttttttctg ccacgataat tccaaacaag attacattcg
     2941 cctttttcta agtttccgac acctccagac atcggatcta aaaaagctgt ttgcacttcg
     3001 gttcctttta tttttaatgg gtaatttata ccaccttctc gtgatctgat acaataagga
     3061 gtttcgaaag aacccgaaat attattatgt ttgtcaataa atctacaatc tctacgtatt
     3121 aggccagttg atttatcaat tacattatga tgcttagatg ttacaatgtt caagttacct
     3181 gcttcatcaa caaacttctt taaaacagaa gatttatttt tgattacgtt aacaaggccc
     3241 aattcatcag aatatttata agtcttttca aagacagttt cttcaccttt tatttttgtt
     3301 gacttctgta atacaccgtc tagatattcc attacaaact tagaaccgtc ttttggttca
     3361 ctaacaattt taccggtata attagttccg tcagctaata cagctctacc cttgttaaat
     3421 ctaccaattt ctttaaatgc atttactgac aattctttaa tttcttgcac cgaggtatta
     3481 tttcctgtta taggagctgt tttaggtttt acctttcctc ttgttacggc ataaatacca
     3541 taagaagcta aagcaaccaa gctcgtagct atggcgactt taactccagt agaaatccct
     3601 ttgccatctt tggaacattg gttaatttga ttagtattgc tatttataga tgttggttta
     3661 gatattggca tattaaactt ttgagcaata cttaaatcag acctgtctac cttccacttt
     3721 tgaaacctat ataaactaag ttataacaat attaattttt gcccaaaacg aatcaaacat
     3781 aaatattttg ttacaatttt tcatttgcct ctagccttaa aacaatcctc atattgtaat
     3841 actcttgagt cgatagtttc ataagacaaa caaattgctc aataagctaa ttttagtaat
     3901 atacaactcc attaccgtat ggtggtagta caaattctcc aataatttca tttctgccag
     3961 actcaacaat ctttgcagga tttctaatat cagttaatag agttgaaaca gtagtaccaa
     4021 tgcctagttt tgtgacattc tgtttaccgg tttcacaaca caatacaata acctgttctc
     4081 ccttagggat gtttttgttt atatagttta atatattttc tccattttga taaaataccc
     4141 aattatttgt ttctgtagca ccacagccat gtccaatcaa aacgtgctta actttttgtg
     4201 gtaatgctaa tttaactgct tctcttgggt aattacaagc aagcattcct ttgcctttta
     4261 ctccacattc tatgtttttc aaccctccga caaagcttct taaatcttct gtagtaggtg
     4321 aatgaagctg caaccctgta gcgctaaaga aatctttgcg tgccattgca atattaggaa
     4381 tttttgcatt caaatgtttt atatactccg tatcacattt tggtgttcca aaagacattt
     4441 tagaaacctt tgatgtccca aagtgaaatg tcttattctg gctactcaaa gcttctgtag
     4501 ccgatacttt ggataaagcg gctggagatt taggaccaaa agtaaattta ggtttagaaa
     4561 cccgttcaga agttttggca agtacttgtt gagcttcctg tgcaagcaac atagacttgt
     4621 ctcgagcacc tacggcccag ttttttccga cttgataaag cgctgttctt atcataatat
     4681 acctaaccaa attttcccta tattaatata aagtattttt ctctcttaaa attgcctaat
     4741 ttttaaaatc tgataaaaag agttgtcaaa gggttaaggt ttgataatct tatcgacacc
     4801 aataaaaaag actccatatg gagtcttttt tagtatttaa ctttttgcgg gttttaataa
     4861 gttttactat aatttcatat ataacagagg ataggggttg tcttgttcat ctgtttctgt
     4921 tcttttgtag actttaaaac cgtttttttc ataaaacctt aaagcatccg gattctgtcc
     4981 attaacagtc aattcattta tcgaatattt ttttatgcca tatttaatga gcttagtccc
     5041 aaaacctttg cctctttcat tggcatttac aaacagcatc tcgagtctgt tattttcaat
     5101 acccataaac gcaagtggta tgttattgtc atccgtaatt attgttaaat attcaacttc
     5161 ctttagtgct tgaggaacat acttttttat attttctatt tcactctctg ataaaaatac
     5221 atgagttgcc ttaactgaac tttcccagac attgataagc tgttcaatca atttttgtgt
     5281 tcttttgttt ttagcaatat ttacagtgat attttttggg ggaatgaata attttgtcat
     5341 gtctattttt tcgtgcttaa ggagttttat tttagtttca atgcctcctg cataaccggt
     5401 gaggctcccg tttgttccaa caactctatg gcagggaatt attatggaaa tcgggttatg
     5461 tccgacagca ccaccaacgg cttgtgcaga cattgttgat ctgccggttt gttttgcaat
     5521 cttttttgct aattcgccat aggttgttaa tttaccgtag ggtatttcac aaagaagctg
     5581 ccatacggcc tgtctgaatt cattgccttt aggggccaga gggagctctt taatttgcgg
     5641 ttgttcacct ttaaaatatc tatcaagcca gttttttgta tcacaaaata cctttaggct
     5701 gttgttttct agcatctttt catccacagt ggcgcaaaag tatttttggc cttccagcca
     5761 tacaccaaca agatttttcc cgtcggaagc caaagtgatt atgcctattg gtgaactata
     5821 gcaagttttg taaaacataa attccctcta ttttgtatca tattgtacaa gttaagcaat
     5881 gtaaatattt tgcaaaaaag ttttttgtaa atcgcaaaaa aattttttca gttattttat
     5941 aataccaaat ataaaaatag cgtggagaaa gttatggcaa atattgtaaa agtaactcaa
     6001 aaaaatcttt ataatatgct agcaagacac aactcaagat tgataagaag acaaactcaa
     6061 ctgcctgatt tttcaaactt gtatgaccac aagctcacag aattcgaata caaaaagctt
     6121 agcgatatca ttcgtactaa agggagttgt ctaaaagctt taaataacgg caaaaagcta
     6181 tataaactgg aaacacaaca gggaacactt cttgcaaaag tcaaaaataa agaagtaaca
     6241 caggtatctt tccctggatt tttcagtcaa aatgacgtaa ataaattcaa ctacaaaaac
     6301 ggtgaatcaa gaacccagta tataaaaaga acaactgatt ttgaaaaaga tgaaacaaaa
     6361 atcttgttcc acagcacaca ctattatcct aacggcaatg gttggagaga ttcattaaca
     6421 ggcaaaccgc ccaaagaata catggacaaa aattatacaa ccataaaatc aagaagagaa
     6481 acctggctta caaacggagg caacagctca gagcttgtac agtctgttac tgctgacggt
     6541 aaggtacagc acaacattgc cagacgctat gaatgggtta aaacaataga cgaaaacaag
     6601 tatgtttcaa gcaacctgga tggaacatac agcatatttc ataacggtaa aaaaatgcaa
     6661 ggtacggcat taaaagacaa agacggtgca ctaatgggat tcagaataga gaaccagaca
     6721 tttttaccgg cagagcttat gaaaattcta catcttcccg aaaagtgggg aaatgaaatc
     6781 gcaaaagcat acataaaatt gctgagctaa aatcatacgg ttttatgcta ttctatagtt
     6841 atgattgaac tattgatttt atacagtttg aaaaaacgcg agcgtacttt atactctttg
     6901 cgctcggata tttttgaaaa attcggctat tttaccaagc cgagcacagg tactatacat
     6961 cctgcattaa aaaggctgtt aaaatcaaat gtaattacta tcagaaacga tttttcgtca
     7021 gggggcaaaa agtcaacata ctatgggctt gcactacact ggcaaaaaaa gtttaatgat
     7081 ttatttttta cacctttgag cgaaaacccg acaatatttt tcaaagaaat acaatcacgt
     7141 attgcggtta tgtctttatt ggaaaacgat ttaaaagaaa cttttataaa agatatttta
     7201 atcaggcttg agtcttttat gcttgatttg caaaatgcac tggatgacga atatgcatca
     7261 tacgacaaat atcagcttgc gctgttgaaa aaaaacattg ctgatatcaa cagctacaaa
     7321 acatttataa atgaactgga ggcacagtaa tgcctgctat tgtatcagaa gtgctggaaa
     7381 actctattgc acaggagctt gaaattgaaa agggcgataa aattatatcc ataaataatg
     7441 aaaagccaca ggatatgata gattatcgtt acatgatgtg ctcggaagag atagagctgg
     7501 agattgaaaa aactaacggt gaaacagaaa tttacgagat agaaaaagat tttgacgagg
     7561 atcttggtgt tgtatttgaa tcagctgtgt ttgacaggat aaaaccctgc actaaccgtt
     7621 gtattttttg ctttgttgac cagcagccag aaggtttaag aaaatcttta tacattaaag
     7681 atgacgatta caggctttct tatttgcagg gcacatacgt tacactcaca aatcttactc
     7741 aaaaagaccg cgaaagaatt gaaaagctgc atcttggccc gttatatgtt tcggtacaca
     7801 caacaaatcc tgaattaagg gtaaaaatgt tgagtaatcc cagggctgca aatatcatag
     7861 aagatttgaa atggttaaaa aaagcagaca ttcctataca tgcgcagatt gtactatgcc
     7921 cgggttataa tgacggacaa gagcttgagc gcacgcttag cgactttgca aaatttaaat
     7981 ccataattga atcagttgca attgtgcctg ttggaattac aaagtttcac caaaacggat
     8041 taaaaactct tacaaagagc aatgcgctgc atgtcattaa acaggttgaa gagtttaata
     8101 aaaaagtaaa aaaacaactt gccatggcca gtgatgagtt ttttttgaaa gcagattatc
     8161 cggtgcctga aaaaaaatac tacggtaatt ttgcccagat agaagatgga gtgggtgctt
     8221 taagactttt gatggatgat tttgaaaaaa acagaaaaaa aattcctctt tcagttaaaa
     8281 agcctaaaga aataattttt gcgacaacgc caagtgcggc aaagcttgtt ggctgtattg
     8341 ccgacgaatt gaacaaggta aaaaatttac agtgcagtgt tattgaatta aaaaataatt
     8401 tttttggtga caatgtaatt gttgcaggtc tgattacagg gaatgacttg atttgtcagc
     8461 tcaaagaaaa aagcaaagag ttgaatatta aaaacgtaat aattccatca attatgctgc
     8521 gtccgtttac ggaagacttt ttagacaatg ttacgctaaa agaggtggaa caggctcttg
     8581 aatgcaaagt ttttccgatt aaagacatct attctgccag agaaataatt gacatcatca
     8641 aaagttagat aagaaacatt acgacaaatg ccccgaaaat aagtgcaggg ccgtaaggaa
     8701 taacagcggg tttatcgtta tttttgattg aagcaattat caatctgcaa cagtaaaggc
     8761 cgatactggc tacaaggata tatgtaaacc atctgaacat a
//
LOCUS       DABS01000225            8860 bp    DNA     linear   ENV 29-SEP-2017
DEFINITION  TPA_asm: Candidatus Gastranaerophilales bacterium HUM_21
            contig_12622, whole genome shotgun sequence.
ACCESSION   DABS01000225 DABS01000000
VERSION     DABS01000225.1
DBLINK      BioProject: PRJNA348149
            BioSample: SAMN05904592
            Sequence Read Archive: SRR4897030
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Candidatus Gastranaerophilales bacterium HUM_21 (human gut
            metagenome)
  ORGANISM  Candidatus Gastranaerophilales bacterium HUM_21
            Bacteria; Candidatus Melainabacteria; Candidatus
            Gastranaerophilales.
REFERENCE   1  (bases 1 to 8860)
  AUTHORS   Soo,R.M., Hemp,J., Parks,D.H., Fischer,W.W. and Hugenholtz,P.
  TITLE     On the origins of oxygenic photosynthesis and aerobic respiration
            in Cyanobacteria
  JOURNAL   Science 355 (6332), 1436-1440 (2017)
   PUBMED   28360330
REFERENCE   2  (bases 1 to 8860)
  AUTHORS   Soo,R.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2016) School of Chemistry and Molecular
            Biosciences, University of Queensland, Cooper Road, Brisbane 4072,
            Australia
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/25/2017 17:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,072
            CDS (total)                       :: 2,042
            Genes (coding)                    :: 1,863
            CDS (coding)                      :: 1,863
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            Pseudo Genes (ambiguous residues) :: 132 of 179
            Pseudo Genes (frameshifted)       :: 57 of 179
            Pseudo Genes (incomplete)         :: 8 of 179
            Pseudo Genes (internal stop)      :: 3 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8860
                     /organism="Candidatus Gastranaerophilales bacterium
                     HUM_21"
                     /mol_type="genomic DNA"
                     /isolate="HUM_21"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1916319"
                     /environmental_sample
                     /country="China: Beijing"
                     /collection_date="05-Jun-2014"
                     /note="metagenomic; derived from metagenome: human gut
                     metagenome"
     gene            260..1522
                     /locus_tag="CPT85_10320"
     CDS             260..1522
                     /locus_tag="CPT85_10320"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20311.1"
                     /translation="MPKVKLTPIKQKTKKEEVKEIIQNPDDPLAKYPLRAFGYSNEVG
                     AAVSAMPGWGKTAEVALWVPALMYLGADIYDKFKRGKEGDYTKASSSAAVQQAVFQAL
                     ASVILPTAAVKMGQSIAGQFTKFDGSGLNATAKEEILDKLQNDFAKAKFAKGDRMENG
                     VLKKGKDAVWERIHDHSFLHELDNTQVKLRKESVFKKIWKVFAHGSGMDATAVADRTK
                     VEQFLKRKVNDIFDKQTLIETGTLEQIEKTNDKNLIKAYKKAIQKAQVNYENLIKERP
                     NFVVEKILSSGEQKHKHLIDMITQEFPAVNDRKQLVSATDAGKNVSAKLLKKLMSNET
                     DKNLITELAKKAEASNEVISKLIQGKKLKLGLLKTTGGFIALGLLAIPIDHFVHNYII
                     KKFVEPGLENVQQLQRKLSFKSSDDSKI"
     gene            complement(1519..1779)
                     /locus_tag="CPT85_10325"
     CDS             complement(1519..1779)
                     /locus_tag="CPT85_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008375554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="DAB20312.1"
                     /translation="MNKKYYTYLILTVDNTLYCGYTDDPEKRFEKHKAGLAAKYTRAH
                     KPLKMVYVKEFDTKSEALKEERRIKKLSRSQKEELVNSYKQD"
     gene            complement(1779..2834)
                     /locus_tag="CPT85_10330"
     CDS             complement(1779..2834)
                     /locus_tag="CPT85_10330"
                     /inference="COORDINATES: protein motif:HMM:TIGR00737"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="DAB20313.1"
                     /translation="MNPNPPQKNKRIIKIGNVEVQSCVSLAPMAGITDLPLRQLIRRY
                     SKNCLLTTEMISSEMLMQNRKDGNMILEREDNEFPLAYQLSGHKPSMMAAAAKKIEKY
                     ADIIDINMGCPVKKVVGGGDGSALMRTPQLASDIVKAIKDTVDVPVTVKFRLGYTAVE
                     QNFMEFAKLMEDSGADAMTIHCRTRAQMYAGQADWKTICNVKKEIKVPVFANGDVVDI
                     ESAKKCLQESNADGIAIGRGILGNPDLIARIEHYLETGEMLPDSDIFERIALLKDHIE
                     HEVKFRSERVAMQFVRKFYPYYLKGFQGASWYRNKLVQENGFVQAMRILITLEERLKE
                     QSAPPTLWEREFAYIEK"
     gene            complement(2806..4983)
                     /locus_tag="CPT85_10335"
     CDS             complement(2806..4983)
                     /locus_tag="CPT85_10335"
                     /inference="COORDINATES: protein
                     motif:HMM:PF00515.26,HMM:PF13432.4,HMM:PF14559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="DAB20314.1"
                     /translation="MNKKALIAMFILALININAANAQEIAEGKIVPVNNTSEYSAQGS
                     QYYNNGVNFLKSAQYTNAITEFRKALRENPQDKSSRIQLVNAYLSRAQYYNNKAMDYN
                     KAANDLRSAIFYMKYYNNEPADAMYITDINAMEGNLDNVLYAIKADQSPKGHFMMGKS
                     LRAQGEFAAAITEFQKSQTDVTYRKQSLANLGEIYYILNLNNQAVDYLNEAIVLDPKN
                     SELHLKLAGAYERLGKVDLAAEQYNLALSRSGDNTEILMSLENIWRQKVCDNPNDAEA
                     HANLGAVYQKQNNFAAALQQYEKAEELNPSNVNTRLNMGTLYQAKKEYETAIAAYDTI
                     IDVNPNFMLAYLYKAQCYKAMGNKNAAIQNYKLALNLDPSNQDIKAELYSVYETGMTQ
                     DEKLAYIKEQLQKEPSNAELNYKYAYXXVPYYSQAIKLNPKSENAYINLAQAYTQQGN
                     FDKARNLLTEAKGLFPENTTIKKQLASIDAETTSLLYTNASKLFGEKKYQEAIDMYNK
                     IIPATAESTLGIGACYQAMNNFAQAAQYYEKSFNLDPKNADTAYYAGLAYSNIENFSK
                     AKTYAQKALTIDPQNKNAKELMAYVKEQECTTKMDKAINLFDAKQYQQAITLLTEAIS
                     LDPKNADAYYYRAMVYDAQKKYAQAINDYKKALQFNPQMTIANYSIAIDYDYLAQYSN
                     ALLYHKKYLAQTQKQGETNDYTRYSAKRIQDLKAYEPKPSAKK"
     assembly_gap    3726..3728
                     /estimated_length=3
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            5314..5880
                     /gene="rpsE"
                     /locus_tag="CPT85_10340"
     CDS             5314..5880
                     /gene="rpsE"
                     /locus_tag="CPT85_10340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019500652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="DAB20316.1"
                     /translation="MEEKPAKGKRANNAKAKGKRKIETVENAPQSEWKERVVQIRRVT
                     KVVKGGKKLSFRAIVIVGNGKGQVGVGCAKASEVIIAIQKAIAEGRKNLISVPIFKTT
                     IPHPIVGRSGAGSVMLRPASQGTGVIAGGAVRAVLELAGIENILSKSLGSKSPLNAAN
                     ATMAALKELRSFNDVAKKRGLTLKEMLN"
     gene            5912..6103
                     /locus_tag="CPT85_10345"
     CDS             5912..6103
                     /locus_tag="CPT85_10345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003348589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="DAB20315.1"
                     /translation="MAKDKLEKVSIKLTRSLIGSTKDQIKVVRALGLKKTNDVVEHFA
                     SPTIMGMVNKVPHLVTVIK"
     gene            6136..6576
                     /locus_tag="CPT85_10350"
     CDS             6136..6576
                     /locus_tag="CPT85_10350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011026320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="DAB20317.1"
                     /translation="MTLEDLRPAEGSTHRTKRVGRGRSSGHGKTSCRGHNGEGQRSGS
                     SSKRGFEGGQMPSYRQMPKLKGFTNFAALNCAEINVKDIEKLDAAEIDLTWLIENGKA
                     HPKSEVLRVLGNGEISKSVTVKARYFTPSAKEKIEKAGGKAELV"
     gene            6689..8011
                     /gene="secY"
                     /locus_tag="CPT85_10355"
                     /pseudo
     CDS             6689..8011
                     /gene="secY"
                     /locus_tag="CPT85_10355"
                     /inference="COORDINATES: protein motif:HMM:TIGR00967"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
     assembly_gap    6891..6899
                     /estimated_length=9
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
     gene            8059..8724
                     /locus_tag="CPT85_10360"
                     /pseudo
     CDS             8059..8724
                     /locus_tag="CPT85_10360"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS+"
                     /note="too many ambiguous residues; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS+."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     assembly_gap    8638..8652
                     /estimated_length=15
                     /gap_type="within scaffold"
                     /linkage_evidence="paired-ends"
BASE COUNT         2611 a         1561 c         1732 g         2929 t
ORIGIN      
        1 ttcaccataa ggacagtata gcgaaaaata gttttttgta aactttttat aaataaattt
       61 gagtataaac ctgttacata gcaaaaaaaa tttatcacag gttatttaca atcagtgaag
      121 tttacactat tataaaaatc caagttatca ccgtaattaa ttagattttg gcaatcacat
      181 ttggattttt aacagtctgg atacatagaa aaaaggaact ttaaaattga cggaaataaa
      241 ttcgacatat tcattaataa tgccgaaggt aaaactgacg ccgattaaac aaaaaactaa
      301 aaaagaagaa gtaaaagaaa taatccaaaa ccctgacgac cctcttgcaa aatatccgtt
      361 aagagcgttt ggatattcta acgaagttgg tgcggctgtt tctgcaatgc caggctgggg
      421 taaaaccgcg gaagttgcac tgtgggttcc tgctttaatg tatcttgggg ctgatattta
      481 tgacaaattt aaacgcggta aagaaggtga ttacacaaaa gcttcttctt ctgccgctgt
      541 acaacaggct gtttttcagg ctcttgccag tgtaatttta cccacagccg cagtaaaaat
      601 gggtcaaagt attgccggtc agtttacaaa atttgatggt tccggcttga acgctactgc
      661 aaaagaagaa attttggaca agctgcaaaa cgactttgca aaagcaaaat ttgcaaaagg
      721 cgaccgtatg gaaaatggtg tgcttaaaaa aggcaaagat gccgtttggg aaagaatcca
      781 cgaccatagc ttcctacacg aattggacaa tacacaggta aaattacgca aagaaagcgt
      841 gttcaaaaaa atctggaaag tttttgctca tggttcaggc atggatgcta cagctgttgc
      901 ggatagaaca aaagttgaac aattcctcaa aaggaaagta aatgacattt ttgacaagca
      961 aacattgatt gaaacaggta cgttagagca aatagaaaaa actaatgaca aaaatttaat
     1021 caaggcatac aaaaaggcta tccaaaaagc acaggtcaat tacgaaaacc ttatcaaaga
     1081 aagaccgaac tttgttgttg aaaaaattct ttcttccggt gaacaaaaac acaaacatct
     1141 tattgatatg attacgcagg aatttcctgc agtaaatgac aggaaacagc ttgtttctgc
     1201 cactgatgcg ggcaaaaatg tcagtgcaaa gctgctcaaa aagcttatga gcaatgaaac
     1261 agataaaaat ttgattacag agcttgcaaa aaaagcagaa gcctcaaatg aagtaataag
     1321 caaactgatt cagggtaaaa aattgaaact cggccttttg aaaacaacgg gcggttttat
     1381 tgctcttggt ttgctggcta ttcctattga ccattttgta cataattata ttatcaaaaa
     1441 gtttgttgaa cccggtttgg aaaatgtgca gcagctgcag cgtaaactgt cttttaaaag
     1501 cagcgacgat agcaaaattt agtcttgttt ataagaatta acaagctctt ctttctggct
     1561 tcgcgagagc ttttttattc tgcgctcttc tttaagcgct tctgattttg tgtcgaattc
     1621 tttgacatac accattttta aaggcttgtg cgcgcgggta tattttgcag caagaccggc
     1681 tttgtgtttt tcaaaacgtt tttcagggtc atctgtatat ccgcagtaaa gagtgttgtc
     1741 aactgttaaa atcaggtatg tgtaatattt tttgttcatt acttttcaat ataggcaaat
     1801 tccctttccc ataaagttgg cggggcactt tgctctttta atctttcttc cagcgttatg
     1861 agtatcctca ttgcctgcac aaaaccgttt tcctgtacaa gtttgtttct gtaccacgaa
     1921 gcaccctgaa aacctttgag gtaatacgga taaaattttc tgacaaactg cattgccacc
     1981 ctctcggagc ggaattttac ctcatgctca atatggtctt ttaaaagtgc aatgcgctca
     2041 aaaatatctg agtcaggcag catctctcct gtttctaaat agtgttcgat tcttgcaatc
     2101 aaatccggat ttccaagaat gcctctacca attgctattc cgtctgcgtt ggattcttgc
     2161 aggcattttt ttgcgctttc aatatcaaca acatctccgt tagcaaatac aggtactttt
     2221 atttcttttt ttacattaca aatcgtcttc cagtctgcct gaccggcata catctgggct
     2281 ctggttctgc aatgtatggt cattgcatcg gctccggagt cttccattag ctttgcaaat
     2341 tccataaagt tttgctctac tgcagtgtat ccaagacgga atttcacggt aacaggtaca
     2401 tcaacagtgt cttttattgc ttttacaatg tcgcttgcaa gctgcggcgt cctcatcaaa
     2461 gcggaaccgt caccgcctcc tacaactttt tttacaggac agcccatatt tatgtcaatg
     2521 atatcagcgt atttttcaat tttttttgct gcagctgcca tcattgacgg cttgtgccct
     2581 gacaattgat aagcaagcgg gaattcatta tcttcccttt caagaatcat attgccgtct
     2641 tttctatttt gcataagcat ttcagagctt atcatttcgg tggttaaaag gcagttttta
     2701 gaataccttc tgataagctg tctcaaaggc aagtctgtaa tacctgccat cggtgcaaga
     2761 gagacgcagc tttgcacttc aacattgcct atttttatga ttcttttatt tttttgcgga
     2821 gggtttgggt tcataagctt ttaaatcctg tattcttttt gcagaatatc ttgtgtagtc
     2881 attggtttcg ccttgttttt gggtttgagc aaggtatttt ttatggtaca aaagggcatt
     2941 tgaatactgt gccagatagt cgtaatctat tgctattgaa tagtttgcaa ttgtcatttg
     3001 agggttaaat tgcaaagctt ttttatagtc atttattgcc tgtgcatatt ttttttgtgc
     3061 gtcatagacc attgctctgt aataataagc atcagcgttt ttggggtcaa gtgaaattgc
     3121 ttctgtcagt aatgttatgg cttgctggta ttgttttgcg tcaaacaggt tgatagcttt
     3181 gtccattttt gttgtgcatt cctgctcttt tacgtatgcc ataagctctt ttgcattttt
     3241 gttttgcggg tctattgtca gtgctttttg tgcataagtc ttggcttttg aaaagttttc
     3301 aatattggaa taagccaatc ctgcgtaata tgcagtgtct gcatttttag ggtcaaggtt
     3361 aaaagatttt tcataatact gtgcagcctg cgcaaagttg ttcattgcct gataacaagc
     3421 acctataccc agagtggatt cggccgttgc tgggattatt ttgttataca tatcaatggc
     3481 ttcttgatat ttcttttctc caaaaagttt tgatgcgttt gtgtataaga gtgatgttgt
     3541 ttctgcgtca attgatgcaa gctgtttttt gattgttgtg ttttcgggga aaagaccttt
     3601 tgcctctgtc aggagatttc gtgctttatc aaaattgccc tgctgggtgt aggcttgagc
     3661 aaggtttatg tatgcatttt cgcttttggg attgagtttt attgcctgac tgtagtatgg
     3721 aacggnnnca tatgcgtatt tataatttaa ttctgcattt gaaggttctt tttgaagctg
     3781 ttcttttatg tatgcaagtt tttcatcctg tgtcatacct gtttcataca cgctgtagag
     3841 ctctgctttt atgtcttgat ttgaagggtc aaggttgagt gccagcttgt aattttgtat
     3901 ggcagcattt ttattgccca tagctttgta gcattgagct ttataaagat aagcaagcat
     3961 aaaattgggg tttacgtcaa taattgtgtc ataggcagcg attgctgttt cgtattcttt
     4021 ttttgcctga tacaatgtcc ccatattcaa acgtgtattg acgtttgaag ggttaagctc
     4081 ttctgctttt tcatattgct ggagtgctgc tgcaaagtta ttttgctttt gataaaccgc
     4141 accgaggttt gcgtgagctt ctgcatcatt cgggttgtcg cagacttttt gacgccatat
     4201 gttttcaagc gacattaata tttctgtgtt gtcgccggaa cggctcaagg caagattgta
     4261 ctgctctgct gccaggtcaa ctttgcccag tctctcataa gcacctgcca gttttaaatg
     4321 aagctctgaa tttttaggat ccagcacaat cgcttcattt aagtagtcca ctgcctgatt
     4381 gtttaaattt aatatataat aaatctctcc aaggttagcc agcgattgct ttctgtaggt
     4441 cacatccgtc tgggattttt gaaactctgt aattgccgca gcaaactctc cctgtgctcg
     4501 cagtgattta cccatcataa aatgcccttt agggctctgg tcggctttta ttgcatagag
     4561 aacgttgtca agatttcctt ccattgcgtt gatatcagtg atatacatag cgtcagcggg
     4621 ttcgttattg tagtatttca tataaaatat tgccgagcga aggtcattgg ctgccttatt
     4681 gtagtccatt gccttgttgt tgtaatactg ggcccgtgaa aggtatgcat ttacaagctg
     4741 gattcgtgag gatttgtcct gcgggttttc tcttagggct tttctaaatt ctgttatagc
     4801 atttgtgtac tgcgctgatt tgaggaaatt tacaccattg ttgtaatact gtgaaccctg
     4861 tgctgagtac tctgatgtat tattaacggg aacaatttta ccttcggcaa tttcttgcgc
     4921 gttcgccgcg tttatattta tcaaagccag tataaacatt gcgatgagag cttttttgtt
     4981 cattttacaa tcctctttgt atggcaaata ctatataatt atatgtcaaa tgttaaaata
     5041 aagcatacag ttttgttact aaatattacc agtagtcttg cacaaaaaaa attaccatgt
     5101 atgataaaaa agtcagaaaa gttacccgac aatttaatac acacccggct gatatttttc
     5161 ggcttcattt ttgttgtata aattgtctat atatttaaaa atagtttact aaaaagaatt
     5221 acactaagga aaggtaatac agtggaagaa aaagaaattc aagaagttga aacagtagaa
     5281 acagttgaaa caactgaaac tgttgaagca gctatcgaag aaaaacctgc taaaggtaaa
     5341 agagctaaca acgctaaagc taaaggcaaa agaaaaattg aaacagttga aaatgctcct
     5401 caatcagaat ggaaagaaag agtagttcaa atcagacgtg taacaaaagt agttaagggc
     5461 ggtaaaaaac tgagcttcag agctatcgtt atcgtaggaa acggcaaagg ccaggttggt
     5521 gttggctgtg ctaaagcttc tgaagttatc attgctatcc aaaaagctat tgcagaaggt
     5581 agaaaaaacc ttatttccgt acctatcttt aaaacaacta ttcctcaccc gattgttggc
     5641 cgttcaggtg ctggttctgt tatgttgaga cctgcttctc aaggtaccgg tgttatcgca
     5701 ggcggtgctg ttcgtgcagt attagagctt gccggtatcg aaaacatttt gagcaaatca
     5761 ctcggttcaa aatctccgct taacgcagct aacgctacta tggcagcttt aaaagagttg
     5821 agatctttca acgatgttgc taaaaaacgc ggtttgactt taaaagaaat gttaaattaa
     5881 tcacacaaaa tcaataaagg aaataataac aatggctaaa gataaattag aaaaagtttc
     5941 gattaaactt acaagaagct taatcggctc tacaaaagac caaatcaagg ttgtaagagc
     6001 tcttggtttg aaaaagacaa acgatgttgt tgaacacttt gccagcccta caattatggg
     6061 tatggttaac aaagttcctc atctcgtaac agtaattaag taattaaaga aaaggatata
     6121 aaaatggcag acagaataac attagaagat ttaagacctg ctgaaggctc tactcacaga
     6181 acaaaaagag tgggcagagg cagatcatca ggacacggta aaacttcttg ccgcggccat
     6241 aacggtgaag gacaacgttc aggttcaagc tctaaaagag gttttgaagg cggacagatg
     6301 ccctcttaca gacaaatgcc gaaattaaaa ggtttcacaa actttgctgc tcttaactgt
     6361 gcagaaatca atgttaaaga cattgaaaaa ctcgacgcag cagaaatcga tttgacttgg
     6421 ttaatcgaaa acggcaaagc tcatccgaaa tcagaagtat tgagagtttt aggcaacggc
     6481 gaaatttcaa aatccgttac cgtaaaagca agatacttta caccttctgc taaagaaaaa
     6541 attgaaaaag caggcggtaa agctgagtta gtataaaaaa atatataaac tgcaagctga
     6601 tacaatatac agcttgcagt ttaactattc tatccgtctt gatagttaga aacatgatag
     6661 acggaaaaat caatggagag gacttataat gcaaaatgca agaatgaaac cgcctacaat
     6721 ggatgatgtt gtatcaatgt ttcaggcatc aggtttaaaa gcaaaactgt tatttacttt
     6781 tgctatgata gttattttta ggcttggtgt agcgcttcct ttgtacgggg taaataacga
     6841 ggtaatatcc aaccttgcaa gacagggaaa tcttataggt tttattgacc nnnnnnnnnc
     6901 tattctggca cttggtatcg ggccttacat cacagcttca attatcatgc agctgttgac
     6961 tgtaatcatc cctcaccttg aacagcttca aaaagaagaa ggcgaagccg gaagacgaaa
     7021 aatatctcaa tatacaagat attttactgt atttattgcg ttctttcagg caacaatatt
     7081 cttgctttat cttttgcatc aaacaagcaa cgcacttctt cccggtgtgt ctccgattgt
     7141 atttttcatc ggttctgcaa ttattttgac agcaggttcg gtttttgtaa tgtggcttgc
     7201 tgaattgatg actgaaagag gtattggtaa cggcggttct ttgttaatct ttgtcggtat
     7261 catttcaaga ctcccctctt attgcgaaca gacaggaact cttgttgcaa atgattcttc
     7321 tttgcagctt ggcttgctgg cattgctggc aatattcttt gcaacaatgg ttttaattgt
     7381 aatcatgcaa gaagctgtaa gaaaagttct cattgtaaac cctaaacgtc aggtgggcaa
     7441 taaaatttac ggcggagtaa atacatatat tccgtttaag atgaatccgg gcggtgtaat
     7501 gcctatcatc tttgcaattg ctattttgct ctttccaaca acagtaataa gccttattgg
     7561 ccagacaaat ctgcctgccg gagcattgaa agatgcaatc acttggcttt ctacaacatt
     7621 gagcccttcc ggttgggtac attatttatt atatttcttg ttgattgttt tcttaacttt
     7681 cttttatgca tcaattatgc ctaatatgca gccaaaagaa attgccaaca atctgaaaaa
     7741 atacggttca tctattcctg gaattaaacc tggaaaacca accgcagaag ctcttgataa
     7801 gattatttca agattaacat tacttggtgc gttgagcctt ggtattgttg cattgattcc
     7861 ttcaggcgct acttatataa caaggattac gcctttgcaa ggtattggtg ctacgtcatt
     7921 gattatcatg gttggtgttg cactcgactt tatcaatcag attaagacgc aattgctggc
     7981 aaaaaattat gaaagctttt tgaaagaata aaaaaaacat ccctgtaaag ggatgttttt
     8041 ttatgatata atttttttat gaaattcaat ttaattgaaa aaacagcttt ttctgcggtg
     8101 tttattattt ttttattttg tgtggttcgt gattatacag tatcgcatga ttttcttata
     8161 accggtgtct atgggtttat tataggcctg ccgctggttt ttatttgcgg gctttatgtt
     8221 ttgataaaaa ctcttgttgg ctctagtgac cctgtttcta agtcgatacc tgacaaatca
     8281 gaaaatctct actgtgctgc ccctgaaaag aaatatgata attctttggt aaaaaaattt
     8341 gcaaaattcg ggtatttgac atgcggattt gtattcggtg ggataattct ttttgcttcc
     8401 attcaaaaac ttttcctttt gggaatttta tttgttcccg ttatgctggt tgtttggata
     8461 gctgcatttg tatgtgcagt gtatcctatt ggcatgtgta tttcttattt attatctaca
     8521 gagtcaaagc ctgcatctat tgaaaagaca cagttcagta ccgatgaaac ctggggaata
     8581 attgcatatt ttgtgggatt aatcactctt gtattagttt tgtacaactt cttttttnnn
     8641 nnnnnnnnnn nnaaaatgct tacaaaatcg ttgcaagcat taaataaaca cgaggatatt
     8701 aagagagaga gagtatatgg ataaaacttt tattatcgat ttaatttgta agttataatc
     8761 tttaacttgt tgtatttttc ttccttaaag ttttgatttc ccttactctt atataaagta
     8821 ttttgctctt aaaaaattgc ctttaatttt tcaaaaagtt
//
